Citrus Sinensis ID: 044485

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------
Protein Sequence
MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSVFGKSE
Secondary Structure (PSIPRED)
cccccccccccccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHccccccccccEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccEEccccccccccHHHHHHHHccHHHHHHHHHccccccccHHHHHHHHHHHHccccccccccEEEEcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHcccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHccccEcccEEEEEEEEccccHHHHHHHHHHHHHHHccccEEEEccccccccHHHHHcccHHHHHHHHHHHcHHHHHHHHHHHHHHHccEcccEHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEccEccHHHHHHHHHHcHHHHHHHHccccccccHHHHHHHHHHHHcHHHcccccEEEEEcccEEEEcccccEccccc
Coil and Loop (DISEMBL)
MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDdlgesvckdigsssssasgcsyvhcdvtkekdIENAVNTAVTqygkldimfnnagtvdevkpnildndQAEFERILSINLVGAFLGRNMLLGVCGIIGGAAthaytsskhgllgLMKNTAVELGRfgirvncvspyavstpLAKDFLKLADdglggmysnlkgavlepEDAAEAALYlgsdeskcvsghnlvvdgGFAIVNAGFSVFGKSE
Flexible Loop (DISEMBL)
MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDigsssssasgcsYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSVFGKSE
Low Complexity Region (SEG)
MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIgsssssasgcsYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSVFGKSE
Disordered region (IsUnstruct)
*****MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI********GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSVF****
Disordered Region (DISOPRED)
******L*RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLK**********SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSVFG***
Disordered Region (DISEMBL)
MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK************SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSVFGKSE
Disordered Region (DISPRO)
*HANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSVFGK**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSVFGKSE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	257	2.2.26 [Sep-21-2011]
F1SWA0	267	Zerumbone synthase OS=Zin	N/A	no	0.937	0.902	0.475	2e-59
Q7FAE1	274	Momilactone A synthase OS	yes	no	0.961	0.901	0.494	3e-59
Q9SCU0	303	Short-chain dehydrogenase	yes	no	0.922	0.782	0.451	4e-56
Q94K41	257	Short-chain dehydrogenase	no	no	0.906	0.906	0.461	1e-53
Q9C826	285	Xanthoxin dehydrogenase O	no	no	0.945	0.852	0.455	8e-52
P50160	336	Sex determination protein	N/A	no	0.898	0.687	0.408	1e-50
O80713	257	Short-chain dehydrogenase	no	no	0.902	0.902	0.430	6e-49
F4J2Z7	298	Short-chain dehydrogenase	no	no	0.910	0.785	0.438	9e-49
F4J300	259	Short-chain dehydrogenase	no	no	0.906	0.899	0.428	5e-47
O80714	258	Short-chain dehydrogenase	no	no	0.883	0.879	0.416	1e-46

>sp|F1SWA0|ZERSY_ZINZE Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1

 Score =  229 bits (583), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 128/269 (47%), Positives = 164/269 (60%), Gaps = 28/269 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL+GKVAL+TGGA GIGE  ARLF +HGAK+ I D++D+LG+ V + +G    +     Y
Sbjct: 2   RLEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHAC----Y 57

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
            HCDVT E D+  AV+    +YG +DIM NNAG   +   +I D D  EF+++  IN+ G
Sbjct: 58  FHCDVTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGDKVIDIRDADFNEFKKVFDINVNG 117

Query: 129 AFLG-----RNM----------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            FLG     R M          L  V  +I GA  H YT +KH ++GL K+ A ELGR G
Sbjct: 118 VFLGMKHAARIMIPKMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHG 177

Query: 174 IRVNCVSPYAVSTPLAKDFL---KLADDGLGGMYS------NLKGAVLEPEDAAEAALYL 224
           IRVNCVSPYAV T L+  +L   ++ +D L G  +      NLKG  L P D AEA LYL
Sbjct: 178 IRVNCVSPYAVPTRLSMPYLPESEMQEDALRGFLTFVRSNANLKGVDLMPNDVAEAVLYL 237

Query: 225 GSDESKCVSGHNLVVDGGFAIVNAGFSVF 253
            ++ESK VSG NLV+DGGF+I N    VF
Sbjct: 238 ATEESKYVSGLNLVIDGGFSIANHTLQVF 266

Catalyzes 8-hydroxy-alpha-humulene into zerumbone in presence of NAD. Also converts borneol to camphor in vitro. Zerumbone is a highly promising multi-anticancer agent.
Zingiber zerumbet (taxid: 311405)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 2EC: 6

>sp|Q7FAE1|MOMAS_ORYSJ Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1

 Score =  228 bits (581), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/271 (49%), Positives = 178/271 (65%), Gaps = 24/271 (8%)

Query: 2   HANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSS 61
           H +   R+L GKVA+ITGGA GIG CTARLF KHGA+V++ADI+D+LG S+  ++G  +S
Sbjct: 7   HVSADARKLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDAS 66

Query: 62  SASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERI 121
                SYVHCDVT E D+  AV+ AV ++GKLD+MFNNAG        + +  + +FER+
Sbjct: 67  -----SYVHCDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERV 121

Query: 122 LSINLVGAFLG-----RNMLLGVCGII----------GGAATHAYTSSKHGLLGLMKNTA 166
           L++NLVG FLG     R M     G I           GAA+HAYT+SKH L+G  +N A
Sbjct: 122 LAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAA 181

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY---SNLKGA-VLEPEDAAEAAL 222
            ELGR GIRVNCVSP  V+TPLA+  + + D+ +  +    +NLKGA  L+ +D A AAL
Sbjct: 182 GELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAAL 241

Query: 223 YLGSDESKCVSGHNLVVDGGFAIVNAGFSVF 253
           +L SD+ + VSG NL VDGG ++VN+ F  F
Sbjct: 242 FLASDDGRYVSGQNLRVDGGLSVVNSSFGFF 272

Involved in momilactone phytoalexins biosynthesis. Catalyzes the last step of momilactone A biosynthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 5

>sp|Q9SCU0|SDR2A_ARATH Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1

 Score =  218 bits (555), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/268 (45%), Positives = 166/268 (61%), Gaps = 31/268 (11%)

Query: 5   LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSAS 64
           L  +RL+GKVA+ITGGA GIG+ T  LF++HGA V+IAD+ +  G S+ K + SS  ++ 
Sbjct: 27  LYPKRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSL-SSHKTSP 85

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPN--ILDNDQAEFERIL 122
             +++ CDV+ E D+EN VN  V +YG+LDI+FNNAG + + K +  ILD D  EF+ ++
Sbjct: 86  MVAFISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVM 145

Query: 123 SINLVGAFLG-----RNML-----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTA 166
            +N+ G  LG     R M+             V G++GG   HAYT+SKH ++GL KN A
Sbjct: 146 RVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAA 205

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM------------YSNLKGAVLEP 214
            ELG++GIRVNC+SP+ V+T +  +  +    G                 +NLKG  L  
Sbjct: 206 CELGKYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRA 265

Query: 215 EDAAEAALYLGSDESKCVSGHNLVVDGG 242
            D AEAALYL SDESK V+GHNLVVDGG
Sbjct: 266 NDIAEAALYLASDESKYVNGHNLVVDGG 293

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q94K41|SDR3B_ARATH Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1

 Score =  209 bits (532), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/258 (46%), Positives = 166/258 (64%), Gaps = 25/258 (9%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           +RL GK+ +ITGGA GIG  + RLF++HGA+V+I D++D+LG++V   IG   +     S
Sbjct: 4   KRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKA-----S 58

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
           Y HCDVT E ++ENAV   V +YGKLD++F+NAG ++    +ILD +  E +R ++INL 
Sbjct: 59  YYHCDVTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPF-VSILDLNLNELDRTIAINLR 117

Query: 128 G--AFL---GRNML-----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           G  AF+    R M+             V   I G A H YT+SKHGLLGL+K+ +  LG+
Sbjct: 118 GTAAFIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGK 177

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYS---NLKGAVLEPEDAAEAALYLGSDE 228
           +GIRVN V+P+ V+TPL  +  K+  + +    S   NLKG VL+    AEAAL+L SDE
Sbjct: 178 YGIRVNGVAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAALFLASDE 237

Query: 229 SKCVSGHNLVVDGGFAIV 246
           S  VSG NL VDGG+++V
Sbjct: 238 SAYVSGQNLAVDGGYSVV 255

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9C826|ABA2_ARATH Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1

 Score =  203 bits (517), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 124/272 (45%), Positives = 161/272 (59%), Gaps = 29/272 (10%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI--GSSSSSASG 65
           +RL GKVALITGGA GIGE   RLF KHGAKV I D++DDLG  VCK +  G S  +A  
Sbjct: 16  QRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETA-- 73

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             ++H DV  E DI NAV+ AV  +G LDI+ NNAG      P+I +   +EFE    +N
Sbjct: 74  -FFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVN 132

Query: 126 LVGAFLG------------RNMLLGVCG---IIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           + GAFL             +  ++ +C    ++GG   H+Y  SKH +LGL ++ A ELG
Sbjct: 133 VKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELG 192

Query: 171 RFGIRVNCVSPYAVSTPLAKDFL---KLADDGLGGMY------SNLKGAVLEPEDAAEAA 221
           + GIRVNCVSPYAV+T LA   L   +  +D   G        +NLKG  L  +D A A 
Sbjct: 193 QHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAV 252

Query: 222 LYLGSDESKCVSGHNLVVDGGFAIVNAGFSVF 253
           L+L SD+S+ +SG NL++DGGF   N  F VF
Sbjct: 253 LFLASDDSRYISGDNLMIDGGFTCTNHSFKVF 284

Involved in the biosynthesis of abscisic acid.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 8

>sp|P50160|TS2_MAIZE Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1

 Score =  199 bits (507), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/284 (40%), Positives = 160/284 (56%), Gaps = 53/284 (18%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M +RL GKVA++TGGARGIGE   RLF+KHGA+V+IADI D  GE++   +G        
Sbjct: 49  MPKRLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQ------ 102

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQY-GKLDIMFNNAGTV---DEVKPNILDNDQAEFERI 121
            S+V CDV+ E D+  AV+ A++++ G+LD+  NNAG +        +IL  D AEF+R+
Sbjct: 103 VSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRV 162

Query: 122 LSINLVGAFLGRNM---------------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTA 166
           L +N +GA LG                  +  V  ++GG   HAYT+SKH ++GL KN A
Sbjct: 163 LRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAA 222

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKL----------------------ADDGLGGM- 203
            EL   G+RVNCVSP+ V+TP+  +  +                       +D  +  M 
Sbjct: 223 CELRAHGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKME 282

Query: 204 -----YSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG 242
                 + LKG  L P D AEA L+L SDE++ +SGHNLVVDGG
Sbjct: 283 EVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGG 326

Required for stage-specific floral organ abortion.

Zea mays (taxid: 4577)

>sp|O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1

 Score =  194 bits (492), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 111/258 (43%), Positives = 163/258 (63%), Gaps = 26/258 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL GK+A+ITGGA GIG    RLF+ HGAKV+I D +++LG++V   +G   +     S+
Sbjct: 5   RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKA-----SF 59

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
             CDVT EK++ENAV   V +YGKLD++F+NAG +++   + LD +  +F+R +++N+ G
Sbjct: 60  YRCDVTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQ-PGSFLDLNLEQFDRTMAVNVRG 118

Query: 129 --AFL---GRNML-----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
             AF+    R M+             V   IGG   HAYT+SKH LLGL+K+    LG++
Sbjct: 119 AAAFIKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKY 178

Query: 173 GIRVNCVSPYAVSTPLA---KDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES 229
           GIRVN V+PYAV+T +    ++ +++ ++        LKG VL+    AEAAL+L SD+S
Sbjct: 179 GIRVNGVAPYAVATAINSRDEETVRMVEE-YSAATGILKGVVLKARHVAEAALFLASDDS 237

Query: 230 KCVSGHNLVVDGGFAIVN 247
             VSG NL VDGG+++V 
Sbjct: 238 AYVSGQNLAVDGGYSVVK 255

Confers resistance to the incompatible pathogenic bacteria P.syringae pv. tomato DC3000 in a PR1-dependent manner. Seems not involved in abscisic acid (ABA) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J2Z7|SDR4_ARATH Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana GN=SDR4 PE=2 SV=1

 Score =  193 bits (491), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 115/262 (43%), Positives = 167/262 (63%), Gaps = 28/262 (10%)

Query: 7   LRR-LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           LR+ L GK+A+ITGGA GIG    RLF+ HGAKV+I DI+++LG+++   IG   +    
Sbjct: 40  LRQVLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKA---- 95

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
            S+  C+VT E D+ENAV   V ++GKLD++F+NAG + E   ++LD D   F+R +++N
Sbjct: 96  -SFYRCNVTDETDVENAVKFTVEKHGKLDVLFSNAGVL-EAFGSVLDLDLEAFDRTMAVN 153

Query: 126 LVG--AFL---GRNMLLG------VCGI-----IGGAATHAYTSSKHGLLGLMKNTAVEL 169
           + G  AF+    R+M+        VC       IGG   H+YT+SKH LLGL+++    L
Sbjct: 154 VRGAAAFIKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGL 213

Query: 170 GRFGIRVNCVSPYAVSTPLAKDF----LKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG 225
           G++GIRVN V+PY V+T +   +    +K+ ++  G    NLKG VL+    AEAAL+L 
Sbjct: 214 GQYGIRVNGVAPYGVATGMTSAYNEEAVKMLEE-YGEALGNLKGVVLKARHIAEAALFLA 272

Query: 226 SDESKCVSGHNLVVDGGFAIVN 247
           SD+S  +SG NLVVDGGF++V 
Sbjct: 273 SDDSVYISGQNLVVDGGFSVVK 294

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J300|SDR5_ARATH Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=2 SV=1

 Score =  187 bits (476), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 111/259 (42%), Positives = 164/259 (63%), Gaps = 26/259 (10%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           +RL GK+ +ITGGA GIG   ARLF+ HGAKV+I D++++LG++V   IG   +     S
Sbjct: 4   QRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKA-----S 58

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
           +  CD+T E ++ENAV   V ++GKLD++F+NAG V E   +ILD D   F+R +++N+ 
Sbjct: 59  FYRCDITDETEVENAVKFTVEKHGKLDVLFSNAG-VMEPHGSILDLDLEAFDRTMAVNVR 117

Query: 128 G--AFL---GRNML-----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           G  AF+    R+M+             V   IGG   H+YT+SKH LLGL+++    LG+
Sbjct: 118 GAAAFIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGK 177

Query: 172 FGIRVNCVSPYAVSTPLA---KDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE 228
           +GIRVN V+PY V+T L    ++ +K+ +D      + LKG VL+    A+AAL+L SD+
Sbjct: 178 YGIRVNGVAPYGVATGLTSYNEETVKMVEDYCSAT-AILKGVVLKARHVADAALFLASDD 236

Query: 229 SKCVSGHNLVVDGGFAIVN 247
           S  +SG NL VDGG+++V 
Sbjct: 237 SVYISGQNLGVDGGYSVVK 255

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80714|SDR3C_ARATH Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1

 Score =  186 bits (472), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/262 (41%), Positives = 162/262 (61%), Gaps = 35/262 (13%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL+GK+ +ITGGA GIG   ARLF+ HGAKV+I D++++LG++V   IG   +     S+
Sbjct: 5   RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKA-----SF 59

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
             CDVT E ++E+AV   V ++GKLD++F+NAG ++ ++ + LD D   F+RI+++N+ G
Sbjct: 60  YRCDVTNETEVEDAVKFTVEKHGKLDVLFSNAGVLEPLE-SFLDFDLERFDRIMAVNVRG 118

Query: 129 --AFL---GRNML-----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
             AF+    R M+             V   IGG   H YT+SKHGL+GL+++   +LG++
Sbjct: 119 AAAFIKHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKY 177

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSN-------LKGAVLEPEDAAEAALYLG 225
           GIRVN V+PYAV+TP+        D+  G    +       LKG VL+    A+ AL+L 
Sbjct: 178 GIRVNGVAPYAVATPMTSH-----DEVTGKQLEDYFDAKGILKGMVLKASHVAQVALFLA 232

Query: 226 SDESKCVSGHNLVVDGGFAIVN 247
           SD+S  +SG NL VDGG+ +V 
Sbjct: 233 SDDSAYISGQNLAVDGGYTVVK 254

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
255565739	272	short chain alcohol dehydrogenase, putat	0.957	0.904	0.686	1e-96
225464860	268	PREDICTED: momilactone A synthase-like [	0.941	0.902	0.674	1e-96
296084866	861	unnamed protein product [Vitis vinifera]	0.941	0.281	0.674	3e-96
224131792	271	predicted protein [Populus trichocarpa]	0.953	0.904	0.664	4e-95
224133572	271	predicted protein [Populus trichocarpa]	0.953	0.904	0.671	4e-94
330318664	277	alcohol dehydrogenase [Camellia sinensis	0.949	0.880	0.670	6e-93
359479542	327	PREDICTED: momilactone A synthase-like [	0.937	0.737	0.647	7e-91
356544754	269	PREDICTED: momilactone A synthase-like [	0.941	0.899	0.647	6e-90
388499080	271	unknown [Medicago truncatula]	0.953	0.904	0.641	4e-89
356542776	273	PREDICTED: momilactone A synthase-like [	0.937	0.882	0.628	1e-88

>gi|255565739|ref|XP_002523859.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223536947|gb|EEF38585.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  358 bits (920), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 182/265 (68%), Positives = 212/265 (80%), Gaps = 19/265 (7%)

Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGC 66
           LRRL+GKVALITG A GIGEC ARLFSKHGA ++IAD++D+LG SVC+++ S SS     
Sbjct: 11  LRRLEGKVALITGAASGIGECAARLFSKHGANLVIADVQDELGHSVCRELDSPSS----V 66

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
           SY+HC+VT+E+D+ENAVNTAV++YGKLDIMFNNAG V   KPNILDND+AEFE+I+S+NL
Sbjct: 67  SYIHCNVTREEDVENAVNTAVSKYGKLDIMFNNAGVVGIAKPNILDNDKAEFEKIISVNL 126

Query: 127 VGAFLG-----RNML----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           VGAFLG     R M+            VC IIGG A+HAYTSSKHG++GL +NTAVELGR
Sbjct: 127 VGAFLGTKHAARVMIPNRKGSIINTASVCSIIGGVASHAYTSSKHGVVGLTRNTAVELGR 186

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC 231
            GIRVNCVSPY V+TPLAKDF KL DDG+  +YS LK AVL PED AEAALYLGSDESK 
Sbjct: 187 HGIRVNCVSPYLVATPLAKDFFKLDDDGVYRVYSVLKEAVLGPEDVAEAALYLGSDESKY 246

Query: 232 VSGHNLVVDGGFAIVNAGFSVFGKS 256
           VSGHNLVVDGGF  VN GF +F +S
Sbjct: 247 VSGHNLVVDGGFTKVNPGFCMFPQS 271

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464860|ref|XP_002272206.1| PREDICTED: momilactone A synthase-like [Vitis vinifera]

 Score =  358 bits (919), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 176/261 (67%), Positives = 207/261 (79%), Gaps = 19/261 (7%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           RRLQGKVALITGGA GIGE TARLFS+HGAKV+IADI+D+LG+SVCK++ S +S+    S
Sbjct: 12  RRLQGKVALITGGASGIGESTARLFSRHGAKVVIADIQDNLGQSVCKELSSPTSA----S 67

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
           +VHCDVT EKD+ENA+N AV +YGKLDIMFNNAG V E KPNILDND+ EFE+IL++N+V
Sbjct: 68  FVHCDVTSEKDVENAINVAVAKYGKLDIMFNNAGIVGESKPNILDNDKTEFEKILNVNVV 127

Query: 128 GAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           GAFLG     R M+            VC  +GG A+HAYTSSKH ++GL +N AVELG++
Sbjct: 128 GAFLGTKHAARVMIPAGNGSIITTASVCSTVGGVASHAYTSSKHAVVGLARNAAVELGKY 187

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV 232
           GIRVNCVSPY V TPLAKDF KL DDG  G+YSNLKG VL PED AEAALYL S+ESK V
Sbjct: 188 GIRVNCVSPYLVVTPLAKDFFKLDDDGASGVYSNLKGKVLNPEDVAEAALYLASEESKYV 247

Query: 233 SGHNLVVDGGFAIVNAGFSVF 253
           SGHNL++DGGF IVN  F +F
Sbjct: 248 SGHNLLIDGGFTIVNPAFGIF 268

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084866|emb|CBI28275.3| unnamed protein product [Vitis vinifera]

 Score =  357 bits (915), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 176/261 (67%), Positives = 207/261 (79%), Gaps = 19/261 (7%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           RRLQGKVALITGGA GIGE TARLFS+HGAKV+IADI+D+LG+SVCK++ S +S+    S
Sbjct: 605 RRLQGKVALITGGASGIGESTARLFSRHGAKVVIADIQDNLGQSVCKELSSPTSA----S 660

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
           +VHCDVT EKD+ENA+N AV +YGKLDIMFNNAG V E KPNILDND+ EFE+IL++N+V
Sbjct: 661 FVHCDVTSEKDVENAINVAVAKYGKLDIMFNNAGIVGESKPNILDNDKTEFEKILNVNVV 720

Query: 128 GAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           GAFLG     R M+            VC  +GG A+HAYTSSKH ++GL +N AVELG++
Sbjct: 721 GAFLGTKHAARVMIPAGNGSIITTASVCSTVGGVASHAYTSSKHAVVGLARNAAVELGKY 780

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV 232
           GIRVNCVSPY V TPLAKDF KL DDG  G+YSNLKG VL PED AEAALYL S+ESK V
Sbjct: 781 GIRVNCVSPYLVVTPLAKDFFKLDDDGASGVYSNLKGKVLNPEDVAEAALYLASEESKYV 840

Query: 233 SGHNLVVDGGFAIVNAGFSVF 253
           SGHNL++DGGF IVN  F +F
Sbjct: 841 SGHNLLIDGGFTIVNPAFGIF 861

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131792|ref|XP_002328109.1| predicted protein [Populus trichocarpa] gi|222837624|gb|EEE75989.1| predicted protein [Populus trichocarpa]

 Score =  353 bits (906), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 176/265 (66%), Positives = 213/265 (80%), Gaps = 20/265 (7%)

Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGC 66
           LRRL+GKVALITGG+ GIGE  ARLF+KHGAKV+IAD++D+LG SVC+++ + S+S    
Sbjct: 11  LRRLEGKVALITGGSSGIGESAARLFAKHGAKVVIADVQDELGHSVCEELKTESAS---- 66

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
            +VHCDVT+EKD+ENAVNTAV+++GKLDIMFNNAG V   KPNILDND+AEFE+++S+N+
Sbjct: 67  -FVHCDVTQEKDVENAVNTAVSKHGKLDIMFNNAGIVGTPKPNILDNDKAEFEKVISVNV 125

Query: 127 VGAFLG-----RNML----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           VGAFLG     R M+            VCG IGG A+HAYTSSKHG++GLM+NTAVELG+
Sbjct: 126 VGAFLGTKHAARVMIPVRRGSIISTASVCGTIGGVASHAYTSSKHGVIGLMRNTAVELGQ 185

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC 231
            GIRVNCVSPY V TPL KDF KL DD +  +YSNLK AVL+ ED AEAAL+LGSDESK 
Sbjct: 186 HGIRVNCVSPYVVLTPLVKDFFKLDDDEVNRLYSNLKEAVLKAEDIAEAALFLGSDESKY 245

Query: 232 VSGHNLVVDGGFAIVNAGFSVFGKS 256
           VSGHNL+VDGGF IVN GF +F +S
Sbjct: 246 VSGHNLIVDGGFTIVNPGFCMFPQS 270

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133572|ref|XP_002327628.1| predicted protein [Populus trichocarpa] gi|222836713|gb|EEE75106.1| predicted protein [Populus trichocarpa]

 Score =  350 bits (898), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 178/265 (67%), Positives = 210/265 (79%), Gaps = 20/265 (7%)

Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGC 66
           LRRL+GKVALITGG+ GIGE TARLF KHGAKV+IADI+D+LG SVCK++    +S    
Sbjct: 11  LRRLEGKVALITGGSSGIGESTARLFVKHGAKVVIADIQDELGHSVCKELEPEPAS---- 66

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
            ++HCDVT+EKD+ENAVNTAV++YGKLDIMFNNAGT    K NI++ND+AEFE+I+  NL
Sbjct: 67  -FIHCDVTQEKDVENAVNTAVSKYGKLDIMFNNAGTGGTPKTNIIENDKAEFEKIICANL 125

Query: 127 VGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           VGAFLG     R M+            VC IIGG ++HAYTSSKHG+LGLM+NTAVELG+
Sbjct: 126 VGAFLGTKHAARVMIPARRGSIITTASVCAIIGGGSSHAYTSSKHGVLGLMRNTAVELGQ 185

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC 231
           +GIRVNCVSPYAV TPL K+F K+ DD +  +YSNLK AVLE ED AEAALYLGSDESK 
Sbjct: 186 YGIRVNCVSPYAVPTPLFKNFFKMNDDEVSCIYSNLKEAVLEAEDIAEAALYLGSDESKY 245

Query: 232 VSGHNLVVDGGFAIVNAGFSVFGKS 256
           VSGHNLVVDGGF IVN GF +F +S
Sbjct: 246 VSGHNLVVDGGFTIVNPGFCMFPRS 270

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|330318664|gb|AEC10992.1| alcohol dehydrogenase [Camellia sinensis]

 Score =  346 bits (887), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 177/264 (67%), Positives = 202/264 (76%), Gaps = 20/264 (7%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           RRL+GKVALITGGA GIGECTARLFSKHGAKV+IADI+DDLG SVCKD+   S      S
Sbjct: 12  RRLEGKVALITGGASGIGECTARLFSKHGAKVMIADIQDDLGLSVCKDLDEKS-----VS 66

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
           +VHCDVT E  + NAV+ AV Q+GKLDIM+NNAG V   KPNILDND+ EFE+I+ +NLV
Sbjct: 67  FVHCDVTNETHVMNAVDAAVAQFGKLDIMYNNAGIVGLAKPNILDNDKDEFEKIIRVNLV 126

Query: 128 GAFLG-----RNMLL----------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           GAFLG     R M+L           VC  IGG A+HAYTSSKHG+ GL KN AVE G+ 
Sbjct: 127 GAFLGTKQAARVMILNRRGTIITTASVCSPIGGVASHAYTSSKHGVAGLTKNVAVEFGQH 186

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV 232
           GIRVNCVSPY V TPLAKDF KL D+G+ G+YSNLKGAVL PED A+AALYLGSD+S  V
Sbjct: 187 GIRVNCVSPYLVGTPLAKDFYKLDDEGVYGVYSNLKGAVLRPEDVAQAALYLGSDDSMYV 246

Query: 233 SGHNLVVDGGFAIVNAGFSVFGKS 256
           SGHN +VDGGF IVN GF +F +S
Sbjct: 247 SGHNFIVDGGFTIVNPGFCMFEQS 270

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479542|ref|XP_002272280.2| PREDICTED: momilactone A synthase-like [Vitis vinifera]

 Score =  339 bits (869), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 169/261 (64%), Positives = 200/261 (76%), Gaps = 20/261 (7%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
             LQGKVALITGGA GIGE TARLFS+HGAKV+IADI+D+LG SVCKD+  +S+S     
Sbjct: 72  HWLQGKVALITGGASGIGESTARLFSRHGAKVVIADIQDNLGLSVCKDLSPTSAS----- 126

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
           +VHCDVT EK++ENAVN AV  +GKLDIMFNNAG   E KP+ILDND+ EFER+L++N+V
Sbjct: 127 FVHCDVTNEKEVENAVNLAVATHGKLDIMFNNAGIAGEAKPHILDNDKTEFERVLNVNVV 186

Query: 128 GAFLG-----RNML----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           GAFLG     R M+            VC  +GG A+HAYTSSKH ++GL +N AVELG++
Sbjct: 187 GAFLGTKHAARVMIPAGNGSIITTASVCSTVGGGASHAYTSSKHAVVGLARNAAVELGKY 246

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV 232
           GIRVNCVSPY V+TPLAKD  KL DDG+ G+YSNLKG VL  ED AEAALYL  DESK V
Sbjct: 247 GIRVNCVSPYLVATPLAKDLFKLDDDGVSGVYSNLKGKVLNAEDVAEAALYLAGDESKYV 306

Query: 233 SGHNLVVDGGFAIVNAGFSVF 253
           SGHNL+VDGGF +VN  F +F
Sbjct: 307 SGHNLLVDGGFTVVNPSFGIF 327

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544754|ref|XP_003540812.1| PREDICTED: momilactone A synthase-like [Glycine max]

 Score =  336 bits (861), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 171/264 (64%), Positives = 201/264 (76%), Gaps = 22/264 (8%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           RRL+GKVA+ITGGA GIGE TARLFSKHGA V+IADI+DDLG S+CK + S+S       
Sbjct: 12  RRLEGKVAIITGGASGIGEATARLFSKHGAHVVIADIQDDLGLSICKHLESAS------- 64

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
           YVHCDVT E D+EN VNT V+++GKLDIMFNNAG     K +ILDN ++EFE ++++NLV
Sbjct: 65  YVHCDVTNETDVENCVNTTVSKHGKLDIMFNNAGITGVNKTSILDNTKSEFEEVINVNLV 124

Query: 128 GAFLG-----RNML----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           G FLG     R M+            VCG IGG A+HAYTSSKH ++GL KNTAVELG F
Sbjct: 125 GVFLGTKHAARVMIPARRGSIVNTASVCGSIGGVASHAYTSSKHAVVGLTKNTAVELGAF 184

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV 232
           G+RVNCVSPY V+TPLAK+F KL DDG+ G+YSNLKG  L P D AEAALYL SDESK V
Sbjct: 185 GVRVNCVSPYVVATPLAKNFFKLDDDGVQGIYSNLKGTDLVPNDVAEAALYLASDESKYV 244

Query: 233 SGHNLVVDGGFAIVNAGFSVFGKS 256
           SGHNLVVDGGF +VN+GF V G+S
Sbjct: 245 SGHNLVVDGGFTVVNSGFCVLGQS 268

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499080|gb|AFK37606.1| unknown [Medicago truncatula]

 Score =  333 bits (854), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 170/265 (64%), Positives = 203/265 (76%), Gaps = 20/265 (7%)

Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGC 66
           LRRL+GKVALITGGA GIGE TARLFS HGA+V+IADI+DD+G S+C+++  SS++    
Sbjct: 11  LRRLEGKVALITGGASGIGEATARLFSNHGAQVVIADIQDDIGHSICQELHKSSAT---- 66

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
            YVHCDVTKEKDIENAVNT V+++GKLDIMFNNAG     K NIL+N  +EF+ ++ INL
Sbjct: 67  -YVHCDVTKEKDIENAVNTTVSKHGKLDIMFNNAGITGINKTNILENKLSEFQEVIDINL 125

Query: 127 VGAFLG------------RNMLL---GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
            G FLG            R  ++    VCG IGG A+HAYTSSKH ++GLMKNTA+ELG 
Sbjct: 126 TGVFLGTKHAARVMTPVRRGSIINTASVCGCIGGVASHAYTSSKHAVVGLMKNTAIELGP 185

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC 231
           +GIRVNCVSPY V TPLAK+F KL DDG+  +YSNLKGA L P+D AEAALYLGSDESK 
Sbjct: 186 YGIRVNCVSPYVVGTPLAKNFFKLDDDGVLDVYSNLKGANLLPKDVAEAALYLGSDESKY 245

Query: 232 VSGHNLVVDGGFAIVNAGFSVFGKS 256
           VSGHNLVVDGG  + N GF +F +S
Sbjct: 246 VSGHNLVVDGGLTVGNNGFCIFKQS 270

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542776|ref|XP_003539841.1| PREDICTED: momilactone A synthase-like [Glycine max]

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 164/261 (62%), Positives = 204/261 (78%), Gaps = 20/261 (7%)

Query: 11  QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVH 70
           +GKVALITGGA GIGECTARLFSKHGAKV+IADI+D+LG S+CKD+ SSS++     Y+H
Sbjct: 17  EGKVALITGGASGIGECTARLFSKHGAKVVIADIQDELGHSICKDLDSSSAT-----YIH 71

Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF 130
           CDVTKE++IE+AVNT V++YGKLDIM ++AG V    P+IL N ++ FE+++S+NLVG F
Sbjct: 72  CDVTKEENIEHAVNTTVSKYGKLDIMHSSAGIVGAWNPSILHNKKSHFEQVISVNLVGTF 131

Query: 131 LG-----RNM----------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
           LG     R M          +  +CG IGG A+HAYTSSKHG++GL++NTAVELG  GIR
Sbjct: 132 LGIKHAARVMIPSGRGSIVAMASICGRIGGVASHAYTSSKHGIVGLVRNTAVELGTLGIR 191

Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGH 235
           VN VSPYAV TP++K FL   D+G+  +YSNLKG VL+P+D AEA LYLGSDESK VSGH
Sbjct: 192 VNSVSPYAVPTPMSKTFLNTDDEGIAALYSNLKGTVLKPQDVAEAVLYLGSDESKYVSGH 251

Query: 236 NLVVDGGFAIVNAGFSVFGKS 256
           +LVVDGGF +VN G  VFG+S
Sbjct: 252 DLVVDGGFTVVNPGLCVFGQS 272

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
TAIR|locus:2041394	257	SDR5 "short-chain dehydrogenas	0.906	0.906	0.457	5.2e-49
TAIR|locus:2094807	298	SDR4 "short-chain dehydrogenas	0.906	0.781	0.432	3e-46
TAIR|locus:2041439	257	SDR3 "short-chain dehydrogenas	0.898	0.898	0.435	7.9e-46
TAIR|locus:2088399	306	AT3G26770 [Arabidopsis thalian	0.918	0.771	0.434	1e-45
TAIR|locus:2094822	259	AT3G29260 [Arabidopsis thalian	0.902	0.895	0.422	5.6e-45
TAIR|locus:2041449	258	AT2G47120 [Arabidopsis thalian	0.898	0.895	0.421	5e-44
TAIR|locus:2088419	300	AT3G26760 [Arabidopsis thalian	0.894	0.766	0.400	8.4e-42
TAIR|locus:2018149	285	ABA2 "ABA DEFICIENT 2" [Arabid	0.727	0.656	0.467	2.8e-41
TAIR|locus:2125452	343	AT4G03140 [Arabidopsis thalian	0.704	0.527	0.420	1.1e-34
UNIPROTKB|P69167	260	fabG3 "3-alpha-(or 20-beta)-hy	0.918	0.907	0.370	5.8e-34

TAIR|locus:2041394 SDR5 "short-chain dehydrogenase reductase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
 Identities = 118/258 (45%), Positives = 165/258 (63%)

Query:     8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
             +RL GK+ +ITGGA GIG  + RLF++HGA+V+I D++D+LG++V   I           
Sbjct:     4 KRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKAS----- 58

Query:    68 YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
             Y HCDVT E ++ENAV   V +YGKLD++F+NAG ++    +ILD +  E +R ++INL 
Sbjct:    59 YYHCDVTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPFV-SILDLNLNELDRTIAINLR 117

Query:   128 G--AFL---GRNML-LGVCGII----------GGAATHAYTSSKHGLLGLMKNTAVELGR 171
             G  AF+    R M+  G+ G I           G A H YT+SKHGLLGL+K+ +  LG+
Sbjct:   118 GTAAFIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGK 177

Query:   172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYS---NLKGAVLEPEDAAEAALYLGSDE 228
             +GIRVN V+P+ V+TPL  +  K+  + +    S   NLKG VL+    AEAAL+L SDE
Sbjct:   178 YGIRVNGVAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAALFLASDE 237

Query:   229 SKCVSGHNLVVDGGFAIV 246
             S  VSG NL VDGG+++V
Sbjct:   238 SAYVSGQNLAVDGGYSVV 255

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2094807 SDR4 "short-chain dehydrogenase reductase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 113/261 (43%), Positives = 164/261 (62%)

Query:     7 LRR-LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
             LR+ L GK+A+ITGGA GIG    RLF+ HGAKV+I DI+++LG+++   I         
Sbjct:    40 LRQVLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKAS--- 96

Query:    66 XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
               +  C+VT E D+ENAV   V ++GKLD++F+NAG + E   ++LD D   F+R +++N
Sbjct:    97 --FYRCNVTDETDVENAVKFTVEKHGKLDVLFSNAGVL-EAFGSVLDLDLEAFDRTMAVN 153

Query:   126 LVGA--FL---GRNMLLG------VCGI-----IGGAATHAYTSSKHGLLGLMKNTAVEL 169
             + GA  F+    R+M+        VC       IGG   H+YT+SKH LLGL+++    L
Sbjct:   154 VRGAAAFIKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGL 213

Query:   170 GRFGIRVNCVSPYAVSTPLAKDF----LKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG 225
             G++GIRVN V+PY V+T +   +    +K+ ++  G    NLKG VL+    AEAAL+L 
Sbjct:   214 GQYGIRVNGVAPYGVATGMTSAYNEEAVKMLEE-YGEALGNLKGVVLKARHIAEAALFLA 272

Query:   226 SDESKCVSGHNLVVDGGFAIV 246
             SD+S  +SG NLVVDGGF++V
Sbjct:   273 SDDSVYISGQNLVVDGGFSVV 293

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

TAIR|locus:2041439 SDR3 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 112/257 (43%), Positives = 163/257 (63%)

Query:     9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
             RL GK+A+ITGGA GIG    RLF+ HGAKV+I D +++LG++V   +           +
Sbjct:     5 RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKAS-----F 59

Query:    69 VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
               CDVT EK++ENAV   V +YGKLD++F+NAG +++   + LD +  +F+R +++N+ G
Sbjct:    60 YRCDVTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQ-PGSFLDLNLEQFDRTMAVNVRG 118

Query:   129 A--FL---GRNML-LG-----VCGI-----IGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
             A  F+    R M+  G     VC       IGG   HAYT+SKH LLGL+K+    LG++
Sbjct:   119 AAAFIKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKY 178

Query:   173 GIRVNCVSPYAVSTPL-AKD--FLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES 229
             GIRVN V+PYAV+T + ++D   +++ ++        LKG VL+    AEAAL+L SD+S
Sbjct:   179 GIRVNGVAPYAVATAINSRDEETVRMVEE-YSAATGILKGVVLKARHVAEAALFLASDDS 237

Query:   230 KCVSGHNLVVDGGFAIV 246
               VSG NL VDGG+++V
Sbjct:   238 AYVSGQNLAVDGGYSVV 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2088399 AT3G26770 [Arabidopsis thaliana (taxid:3702)]

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 117/269 (43%), Positives = 158/269 (58%)

Query:     8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
             ++L+GKVALITGGA G+G+ TA  F +HGA+V+IAD+  + G    K++           
Sbjct:    39 KKLEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELGSEAE------ 92

Query:    68 YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKP-NILDNDQAEFERILSINL 126
             +V CDVT E DI  AV   V +YGKLD+M+NNAG V  + P +I   D  EFER++ IN+
Sbjct:    93 FVRCDVTVEADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINV 152

Query:   127 VGAFLG-----RNML----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
              G   G     + M+            V G+ GG A H+YT SK    G++K+ A EL  
Sbjct:   153 FGVVSGIKHAAKFMIPARSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELCE 212

Query:   172 FGIRVNCVSPYAVSTPLAKDFL-----KLADDGLG----GMYSNLKGAVLEPEDAAEAAL 222
              G+R+NC+SP  V+TPL   +L     K++++ L     GM   LKGA  E  D A+AAL
Sbjct:   213 HGVRINCISPGTVATPLTLSYLQKVFPKVSEEKLRETVKGM-GELKGAECEEADVAKAAL 271

Query:   223 YLGSDESKCVSGHNLVVDGGF-AIVNAGF 250
             YL S++ K V+GHNLVVDGG  A   AGF
Sbjct:   272 YLASNDGKYVTGHNLVVDGGMTAFKIAGF 300

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2094822 AT3G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 109/258 (42%), Positives = 162/258 (62%)

Query:     8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
             +RL GK+ +ITGGA GIG   ARLF+ HGAKV+I D++++LG++V   I           
Sbjct:     4 QRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKAS----- 58

Query:    68 YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
             +  CD+T E ++ENAV   V ++GKLD++F+NAG + E   +ILD D   F+R +++N+ 
Sbjct:    59 FYRCDITDETEVENAVKFTVEKHGKLDVLFSNAGVM-EPHGSILDLDLEAFDRTMAVNVR 117

Query:   128 GA--FL---GRNMLLG------VCGI-----IGGAATHAYTSSKHGLLGLMKNTAVELGR 171
             GA  F+    R+M+        VC       IGG   H+YT+SKH LLGL+++    LG+
Sbjct:   118 GAAAFIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGK 177

Query:   172 FGIRVNCVSPYAVSTPLA---KDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE 228
             +GIRVN V+PY V+T L    ++ +K+ +D      + LKG VL+    A+AAL+L SD+
Sbjct:   178 YGIRVNGVAPYGVATGLTSYNEETVKMVEDYCSAT-AILKGVVLKARHVADAALFLASDD 236

Query:   229 SKCVSGHNLVVDGGFAIV 246
             S  +SG NL VDGG+++V
Sbjct:   237 SVYISGQNLGVDGGYSVV 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041449 AT2G47120 [Arabidopsis thaliana (taxid:3702)]

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 108/256 (42%), Positives = 160/256 (62%)

Query:     9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
             RL+GK+ +ITGGA GIG   ARLF+ HGAKV+I D++++LG++V   I           +
Sbjct:     5 RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKAS-----F 59

Query:    69 VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
               CDVT E ++E+AV   V ++GKLD++F+NAG ++ ++ + LD D   F+RI+++N+ G
Sbjct:    60 YRCDVTNETEVEDAVKFTVEKHGKLDVLFSNAGVLEPLE-SFLDFDLERFDRIMAVNVRG 118

Query:   129 A--FL---GRNML-LGVCGIIG---------GAATHAYTSSKHGLLGLMKNTAVELGRFG 173
             A  F+    R M+  G  G I          G   H YT+SKHGL+GL+++   +LG++G
Sbjct:   119 AAAFIKHAARAMVEKGTRGSIVCTTSVSAEIGGGHHGYTASKHGLVGLIRSACGDLGKYG 178

Query:   174 IRVNCVSPYAVSTPLAK-DFL--KLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
             IRVN V+PYAV+TP+   D +  K  +D        LKG VL+    A+ AL+L SD+S 
Sbjct:   179 IRVNGVAPYAVATPMTSHDEVTGKQLEDYFDAK-GILKGMVLKASHVAQVALFLASDDSA 237

Query:   231 CVSGHNLVVDGGFAIV 246
              +SG NL VDGG+ +V
Sbjct:   238 YISGQNLAVDGGYTVV 253

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2088419 AT3G26760 [Arabidopsis thaliana (taxid:3702)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 105/262 (40%), Positives = 150/262 (57%)

Query:     8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
             R+L+GKVA+ITGGA GIG+ TA  F   GA+V+I DI ++ G  V  ++           
Sbjct:    34 RKLEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGSAAH------ 87

Query:    68 YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKP-NILDNDQAEFERILSINL 126
             ++ CDVT+E+ I  AV TAVT++GKLD+M N+AG    + P +I D D   +++++ +N+
Sbjct:    88 FLRCDVTEEEQIAKAVETAVTRHGKLDVMLNSAGISCSISPPSIADLDMDTYDKVMRLNV 147

Query:   127 VGAFLG-----RNM----------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
              G  LG     R M          L  + G++GG   HAY+ SK  + G++K  A EL +
Sbjct:   148 RGTVLGIKHAARAMIPAGSGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTVASELCK 207

Query:   172 FGIRVNCVSPYAVSTPLAKDFLKLADDG----------LGGMYSNLKGAVLEPEDAAEAA 221
              G+R+NC+SP  + TPL     + A  G          +      LKG   E  D A+AA
Sbjct:   208 HGLRINCISPAGIPTPLTLRMFREAFAGHSIREEQLLAIVNATGELKGEKCEEIDVAKAA 267

Query:   222 LYLGSDESKCVSGHNLVVDGGF 243
             LYL SD++K V+GHNLVVDGGF
Sbjct:   268 LYLASDDAKFVTGHNLVVDGGF 289

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2018149 ABA2 "ABA DEFICIENT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 95/203 (46%), Positives = 124/203 (61%)

Query:     2 HANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXX 61
             +++L  +RL GKVALITGGA GIGE   RLF KHGAKV I D++DDLG  VCK +     
Sbjct:    10 YSSLPSQRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGES 69

Query:    62 XXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERI 121
                   ++H DV  E DI NAV+ AV  +G LDI+ NNAG      P+I +   +EFE  
Sbjct:    70 KETAF-FIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMT 128

Query:   122 LSINLVGAFLG------------RNMLLGVC---GIIGGAATHAYTSSKHGLLGLMKNTA 166
               +N+ GAFL             +  ++ +C   G++GG   H+Y  SKH +LGL ++ A
Sbjct:   129 FDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVA 188

Query:   167 VELGRFGIRVNCVSPYAVSTPLA 189
              ELG+ GIRVNCVSPYAV+T LA
Sbjct:   189 AELGQHGIRVNCVSPYAVATKLA 211

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010301 "xanthoxin dehydrogenase activity" evidence=IDA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=TAS

GO:0009408 "response to heat" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0010115 "regulation of abscisic acid biosynthetic process" evidence=IMP

GO:0009750 "response to fructose stimulus" evidence=IMP

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0006561 "proline biosynthetic process" evidence=IMP

TAIR|locus:2125452 AT4G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 85/202 (42%), Positives = 124/202 (61%)

Query:     8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
             R+L+GKVALITGGA GIG+ TA  F  HGAKV+IADI+  +G    +++           
Sbjct:    76 RKLEGKVALITGGASGIGKATAGKFISHGAKVIIADIQPQIGRETEQELGPSCA------ 129

Query:    68 YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
             Y  CDVTKE DI NAV+ AV+ + KLDIM+NNAG   +  P+I+D D   F+++++ N+ 
Sbjct:   130 YFPCDVTKESDIANAVDFAVSLHTKLDIMYNNAGIPCKTPPSIVDLDLNVFDKVINTNVR 189

Query:   128 GAFLG----------RNMLLGVC-----GIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
             G   G          RN    +C     G++GG A H Y+ SK  ++G++++TA EL + 
Sbjct:   190 GVMAGIKHAARVMIPRNSGSIICAGSVTGMMGGLAQHTYSVSKSAVIGIVRSTASELCKH 249

Query:   173 GIRVNCVSPYAVSTPLAKDFLK 194
              IRVNC+SP+A++T    D ++
Sbjct:   250 RIRVNCISPFAITTSFVMDEMR 271

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

UNIPROTKB|P69167 fabG3 "3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 99/267 (37%), Positives = 140/267 (52%)

Query:     6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
             M  RL GKVAL++GGARG+G    R     GAKV+  DI D+ G++V  ++         
Sbjct:     1 MSGRLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADAAR---- 56

Query:    66 XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
               YVH DVT+      AV+TAVT +G L ++ NNAG ++     I D    E++RIL +N
Sbjct:    57 --YVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGILNI--GTIEDYALTEWQRILDVN 112

Query:   126 LVGAFLG------------RNMLLGVC---GIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
             L G FLG            R  ++ +    G+ G  A H YT++K  + GL K+TA+ELG
Sbjct:   113 LTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG 172

Query:   171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
               GIRVN + P  V TP+  D++   +D    ++    G   EP + +   +YL SDES 
Sbjct:   173 PSGIRVNSIHPGLVKTPMT-DWVP--ED----IFQTALGRAAEPVEVSNLVVYLASDESS 225

Query:   231 CVSGHNLVVDGGFAIVNAGFSVFGKSE 257
               +G   VVDGG  +     + FG  E
Sbjct:   226 YSTGAEFVVDGG-TVAGLAHNDFGAVE 251

GO:0005886 "plasma membrane" evidence=IDA

GO:0008202 "steroid metabolic process" evidence=IDA

GO:0047044 "androstan-3-alpha,17-beta-diol dehydrogenase activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.3241	0.8910	0.9308	yes	no
P46331	YXBG_BACSU	1, ., -, ., -, ., -	0.3137	0.8988	0.8461	yes	no
Q8KWT4	BACC2_BACIU	1, ., -, ., -, ., -	0.3281	0.8793	0.8932	yes	no
P69166	HSD_MYCBO	1, ., 1, ., 1, ., 5, 3	0.3809	0.8638	0.8538	yes	no
P69167	HSD_MYCTU	1, ., 1, ., 1, ., 5, 3	0.3809	0.8638	0.8538	yes	no
Q9PKF7	FABG_CHLMU	1, ., 1, ., 1, ., 1, 0, 0	0.3253	0.8832	0.9153	yes	no
Q937L4	CPNA_COMTE	1, ., 1, ., 1, ., 1, 6, 3	0.324	0.8949	0.92	yes	no
P94681	TSAC_COMTE	1, ., 2, ., 1, ., 6, 2	0.3227	0.8910	0.9087	yes	no
P0A2D1	UCPA_SALTY	1, ., -, ., -, ., -	0.3281	0.8871	0.8669	yes	no
P38004	FABG_CHLTR	1, ., 1, ., 1, ., 1, 0, 0	0.3031	0.8754	0.9072	yes	no
Q7FAE1	MOMAS_ORYSJ	1, ., 1, ., 1, ., 2, 9, 5	0.4944	0.9610	0.9014	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1	LOW CONFIDENCE prediction!
3rd Layer	1.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00660144 hypothetical protein (271 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	257
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-91
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	1e-85
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-58
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-56
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-53
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-53
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	9e-50
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	5e-49
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	6e-49
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	3e-48
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-48
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	6e-47
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	4e-46
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	3e-45
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	2e-42
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	5e-42
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	2e-41
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	3e-41
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	7e-41
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-40
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	6e-40
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	1e-39
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-39
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	3e-39
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	6e-39
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	7e-39
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	1e-38
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	2e-38
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	3e-38
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-37
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	9e-37
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	2e-36
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	2e-36
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	3e-36
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	5e-36
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	4e-35
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	6e-35
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	6e-35
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	7e-35
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	1e-34
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	1e-34
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	1e-34
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	2e-34
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	6e-34
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	4e-33
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	4e-33
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	8e-33
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-32
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-32
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-32
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-32
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	2e-32
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-32
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	5e-32
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	6e-32
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	6e-32
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	6e-32
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	1e-31
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-31
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	5e-31
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	6e-31
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-30
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	1e-30
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-30
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-30
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	5e-30
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	6e-30
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	7e-30
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	8e-30
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	9e-30
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	1e-29
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	2e-29
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	3e-29
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	5e-29
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-29
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-28
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-28
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	4e-28
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	7e-28
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	9e-28
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	1e-27
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	3e-27
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	9e-27
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-26
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-26
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-26
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-26
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	3e-26
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	7e-26
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	9e-26
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	1e-25
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-25
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	3e-25
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	4e-25
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	6e-25
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-25
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	8e-25
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	9e-25
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	2e-24
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	7e-24
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	8e-24
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	2e-23
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	2e-23
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	3e-23
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	4e-23
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-23
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	9e-23
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	1e-22
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	1e-22
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-22
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	2e-22
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	3e-22
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	7e-22
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	1e-21
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	1e-21
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	1e-21
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	2e-21
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-21
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	3e-21
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	3e-21
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	4e-21
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	4e-21
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	6e-21
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	7e-21
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	1e-20
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	1e-20
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-20
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-20
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-20
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	3e-20
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	4e-20
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	9e-20
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	9e-20
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	1e-19
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-19
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-19
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	5e-19
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	7e-19
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	7e-19
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	1e-18
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	2e-18
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	2e-18
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	3e-18
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	3e-18
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-18
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	6e-18
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	6e-18
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-17
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	4e-17
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	9e-17
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-16
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	3e-16
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-16
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	5e-16
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	5e-16
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	6e-16
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	8e-16
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	1e-15
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-15
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	2e-15
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	2e-15
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	2e-15
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	3e-15
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	3e-15
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	4e-15
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	5e-15
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	7e-15
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	9e-15
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-14
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	2e-14
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-14
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	3e-14
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	3e-14
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	3e-14
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	3e-14
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	4e-14
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	5e-14
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	1e-13
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	1e-13
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-13
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	2e-13
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	3e-13
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	6e-13
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	6e-13
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	8e-13
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	1e-12
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	1e-12
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	2e-12
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	2e-12
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	2e-12
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	4e-12
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	5e-12
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	5e-12
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-12
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	1e-11
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	2e-11
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-11
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	3e-11
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	4e-11
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	4e-11
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	6e-11
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	2e-10
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	2e-10
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	3e-10
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	3e-10
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	5e-10
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	6e-10
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	8e-10
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	1e-09
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	2e-09
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	2e-09
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	2e-09
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	3e-09
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	5e-09
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	5e-09
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	2e-08
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	2e-08
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	2e-08
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	4e-08
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	5e-08
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	2e-07
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	3e-07
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	3e-07
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	3e-07
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	6e-07
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	6e-07
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	2e-06
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	3e-06
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	3e-06
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	3e-06
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	3e-06
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	3e-06
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	4e-06
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	4e-06
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	4e-06
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	5e-06
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	6e-06
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	7e-06
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	9e-06
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	9e-06
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	2e-05
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	4e-05
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	6e-05
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	6e-05
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	1e-04
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	2e-04
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	2e-04
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	2e-04
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	6e-04
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	7e-04
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	0.001
pfam08659	181	pfam08659, KR, KR domain	0.001
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	0.001
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	0.004
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	0.004
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	0.004

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  270 bits (692), Expect = 1e-91
 Identities = 132/253 (52%), Positives = 166/253 (65%), Gaps = 23/253 (9%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL GKVA+ITGGA GIGE TARLF+KHGA+V+IADI DD G++V  ++G         S+
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDI-----SF 55

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           VHCDVT E D+  AV+TAV ++G+LDIMFNNAG +     +IL+    EFER+L +N+ G
Sbjct: 56  VHCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYG 115

Query: 129 AFLG-----RNM----------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
           AFLG     R M          +  V G++GG   HAYT+SKH +LGL ++ A ELG  G
Sbjct: 116 AFLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHG 175

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMY---SNLKGAVLEPEDAAEAALYLGSDESK 230
           IRVNCVSPY V+TPL      + D+ +       +NLKG  L PED A A LYL SD+S+
Sbjct: 176 IRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYLASDDSR 235

Query: 231 CVSGHNLVVDGGF 243
            VSG NLVVDGG 
Sbjct: 236 YVSGQNLVVDGGL 248

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  255 bits (654), Expect = 1e-85
 Identities = 126/269 (46%), Positives = 159/269 (59%), Gaps = 28/269 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL GKVAL+TGGA GIGE   RLF KHGAKV I D++DDLG++VC  +G          +
Sbjct: 15  RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG----GEPNVCF 70

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
            HCDVT E D+  AV+  V ++G LDIM NNAG      P+I + + +EFE++  +N+ G
Sbjct: 71  FHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKG 130

Query: 129 AFLG-----RNM----------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            FLG     R M          L  V   IGG   HAYT SKH +LGL ++ A ELG+ G
Sbjct: 131 VFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHG 190

Query: 174 IRVNCVSPYAVSTPLAKDFL---KLADDGLGGMYS------NLKGAVLEPEDAAEAALYL 224
           IRVNCVSPYAV T LA   L   +  +D L G  +      NLKG  L  +D A A L+L
Sbjct: 191 IRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFL 250

Query: 225 GSDESKCVSGHNLVVDGGFAIVNAGFSVF 253
            SDE++ +SG NL++DGGF   N    VF
Sbjct: 251 ASDEARYISGLNLMIDGGFTCTNHSLRVF 279

Length = 280

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  186 bits (474), Expect = 1e-58
 Identities = 91/259 (35%), Positives = 133/259 (51%), Gaps = 28/259 (10%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
            RL+GKVA++TG + GIGE  AR F+  GA+V++ D  ++  E V  +I +   +     
Sbjct: 1   MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAI---- 56

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
            V  DV+ E D+E AV  A+ ++G +DI+ NNAGT     P +LD D+AEF+RI ++N+ 
Sbjct: 57  AVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGP-LLDVDEAEFDRIFAVNVK 115

Query: 128 GAFLG-----RNM----------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
             +L        M          +    G+        Y +SK  ++ L K  A ELG  
Sbjct: 116 SPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPD 175

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDG-----LGGMYSNLKGAVLEPEDAAEAALYLGSD 227
            IRVN V+P  V T L + F+           L  +     G +  PED A AAL+L SD
Sbjct: 176 KIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPL---GRLGTPEDIANAALFLASD 232

Query: 228 ESKCVSGHNLVVDGGFAIV 246
           E+  ++G  LVVDGG  + 
Sbjct: 233 EASWITGVTLVVDGGRCVG 251

Length = 251

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  180 bits (458), Expect = 3e-56
 Identities = 94/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL+GKVA++TGGARG+G   ARL    GAKV+++DI D+ G++   ++G ++       +
Sbjct: 2   RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAA------RF 55

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
            H DVT E      V+TA   +G+LD++ NNAG +      +      E+ R+L INL G
Sbjct: 56  FHLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGIL--TGGTVETTTLEEWRRLLDINLTG 113

Query: 129 AFLG--------RNMLLG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELG--R 171
            FLG        +    G       + G++G  A  AY +SK  + GL K+ A+E     
Sbjct: 114 VFLGTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQG 173

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC 231
           +GIRVN V P  + TP+  + L  A   +G   +   G   EP++ A A +YL SDES  
Sbjct: 174 YGIRVNSVHPGYIYTPMTDELLI-AQGEMGNYPNTPMGRAGEPDEIAYAVVYLASDESSF 232

Query: 232 VSGHNLVVDGGF 243
           V+G  LVVDGG+
Sbjct: 233 VTGSELVVDGGY 244

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  172 bits (439), Expect = 2e-53
 Identities = 85/250 (34%), Positives = 131/250 (52%), Gaps = 23/250 (9%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSSSSSASGCS 67
           +L GKVA++TG + GIG   A L +K GAKV+IA DI ++  + + ++I      A    
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAI--- 58

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
            V  DV+ E+D+EN V   V ++GK+DI+ NNAG +      + D    E++R++ +NL 
Sbjct: 59  AVKADVSSEEDVENLVEQIVEKFGKIDILVNNAG-ISNFGL-VTDMTDEEWDRVIDVNLT 116

Query: 128 GAFLGRNMLL--------GVC-------GIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           G  L     L        GV        G+IG +    Y++SK  +    K  A EL   
Sbjct: 117 GVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPS 176

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV 232
           GIRVN V+P A+ T +   F +   +GL        G + +PE+ A+  L+L SD++  +
Sbjct: 177 GIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPL--GRLGKPEEIAKVVLFLASDDASYI 234

Query: 233 SGHNLVVDGG 242
           +G  + VDGG
Sbjct: 235 TGQIITVDGG 244

Length = 247

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  172 bits (437), Expect = 2e-53
 Identities = 74/241 (30%), Positives = 118/241 (48%), Gaps = 22/241 (9%)

Query: 15  ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT 74
           AL+TG + GIG   AR  ++ GAKV++AD  ++    +        +       V  DV+
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAA----IEALGGNAVAVQADVS 56

Query: 75  KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG-- 132
            E+D+E  V  A+ ++G+LDI+ NNAG        + +    +++R+L +NL G FL   
Sbjct: 57  DEEDVEALVEEALEEFGRLDILVNNAGIA--RPGPLEELTDEDWDRVLDVNLTGVFLLTR 114

Query: 133 ---RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCV 179
               +M             V G+       AY +SK  L GL ++ A+EL  +GIRVN V
Sbjct: 115 AALPHMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAV 174

Query: 180 SPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVV 239
           +P  V TP+         +      +   G +  PE+ AEA ++L SDE+  ++G  + V
Sbjct: 175 APGLVDTPMLAKLGPEEAEKELAA-AIPLGRLGTPEEVAEAVVFLASDEASYITGQVIPV 233

Query: 240 D 240
           D
Sbjct: 234 D 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  163 bits (415), Expect = 9e-50
 Identities = 97/255 (38%), Positives = 139/255 (54%), Gaps = 26/255 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL+GKVA++TG   G GE  AR F++ GA+V+IADI  D  E V  DIG ++ +      
Sbjct: 2   RLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIA------ 55

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  DVTK  D+E  V  A++++G+LDI+ NNAG     KP +L+ D+ EF+R+ ++N+  
Sbjct: 56  IQADVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKP-MLEVDEEEFDRVFAVNVKS 114

Query: 129 AFLGRNMLL------GVCGIIGGAATHA---------YTSSKHGLLGLMKNTAVELGRFG 173
            +L    L+      G   II  A+T           Y +SK  ++   K  AVEL    
Sbjct: 115 IYLSAQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRN 174

Query: 174 IRVNCVSPYAVSTPLAKDFLKLAD--DGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESK 230
           IRVNC+ P A  TPL   F+   D  +      + +  G +  P+D A AALYL SDE+ 
Sbjct: 175 IRVNCLCPVAGETPLLSMFM-GEDTPENRAKFRATIPLGRLSTPDDIANAALYLASDEAS 233

Query: 231 CVSGHNLVVDGGFAI 245
            ++G  L VDGG  I
Sbjct: 234 FITGVALEVDGGRCI 248

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  161 bits (410), Expect = 5e-49
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 30/256 (11%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           R L+G+VAL+TG ARGIG   A   +  GA+V++ DI  D   +  + + ++   A    
Sbjct: 2   RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARA-- 59

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
               DV     ++ AV   V  +G+LDI+  NAG         +D++Q  +ER++ +NL 
Sbjct: 60  -RQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQ--WERVIDVNLT 116

Query: 128 GAFL--------------GRNMLLG-----VCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
           G FL              GR +L         G  G A    Y +SK GL+G  +  A+E
Sbjct: 117 GTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAH---YAASKAGLVGFTRALALE 173

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSD 227
           L    I VN V P  V TP+A +           + + +  G + EPED A A L+L SD
Sbjct: 174 LAARNITVNSVHPGGVDTPMAGN--LGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASD 231

Query: 228 ESKCVSGHNLVVDGGF 243
           E++ ++G  L VDGG 
Sbjct: 232 EARYITGQTLPVDGGA 247

Length = 251

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  161 bits (410), Expect = 6e-49
 Identities = 93/262 (35%), Positives = 135/262 (51%), Gaps = 32/262 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L+GKVAL+TG A GIG   A   +K GAKV+IAD+ D+   +  + +     +      
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEAL---QKAGGKAIG 57

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  DVT E+ I   ++ AV  +G +DI+ NNAG +  V P I D    +++++++I L G
Sbjct: 58  VAMDVTDEEAINAGIDYAVETFGGVDILVNNAG-IQHVAP-IEDFPTEKWKKMIAIMLDG 115

Query: 129 AFL--------------GR--NMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           AFL              GR  NM   V G++G A   AY S+KHGL+GL K  A+E    
Sbjct: 116 AFLTTKAALPIMKAQGGGRIINM-ASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATH 174

Query: 173 GIRVNCVSPYAVSTPLA-KDFLKLA-------DDGLGG-MYSNL-KGAVLEPEDAAEAAL 222
           G+ VN + P  V TPL  K    LA       ++ L   +   + +      E+ A+ AL
Sbjct: 175 GVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYAL 234

Query: 223 YLGSDESKCVSGHNLVVDGGFA 244
           +L S  +K V+G   VVDGG+ 
Sbjct: 235 FLASFAAKGVTGQAWVVDGGWT 256

Length = 258

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  159 bits (405), Expect = 3e-48
 Identities = 88/255 (34%), Positives = 130/255 (50%), Gaps = 22/255 (8%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M     GKVAL+TGGA GIG  TA  F++ GAKV++AD     GE     I  +   A  
Sbjct: 1   MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEA-- 58

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             +V CDVT++ +++  V   +  YG+LD  FNNAG   E +  + +  +AEF+ I+ +N
Sbjct: 59  -LFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIE-QGRLAEGSEAEFDAIMGVN 116

Query: 126 LVGAFLG-----RNML----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           + G +L        ML            V G+        Y +SKH ++GL K+ A+E  
Sbjct: 117 VKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYA 176

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--GAVLEPEDAAEAALYLGSDE 228
           + GIRVN V P  + T + +   + AD       + +   G + + E+ A A LYL SD 
Sbjct: 177 KKGIRVNAVCPAVIDTDMFRRAYE-ADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDG 235

Query: 229 SKCVSGHNLVVDGGF 243
           +   +GH L+VDGG 
Sbjct: 236 ASFTTGHALMVDGGA 250

Length = 253

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  159 bits (404), Expect = 3e-48
 Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 36/256 (14%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            LQGK AL+TG +RGIG   A   +  GAKV+I D  ++  E++  ++ ++   A     
Sbjct: 2   SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARV--- 58

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERILS 123
           +  DV+ E  +   +  AV  +G LDI+ NNAG      +  +          +++R++ 
Sbjct: 59  LVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSE-------EDWDRVID 111

Query: 124 INLVGAFL--------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
           +NL G F               GR + +  V G+ G      Y+++K G++G  K  A+E
Sbjct: 112 VNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALE 171

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSN--LKGAVLEPEDAAEAALYLGS 226
           L   GI VN V+P  + T + +    L ++    +     L     +PE+ A A  +L S
Sbjct: 172 LASRGITVNAVAPGFIDTDMTE---GLPEEVKAEILKEIPLGRLG-QPEEVANAVAFLAS 227

Query: 227 DESKCVSGHNLVVDGG 242
           D +  ++G  + V+GG
Sbjct: 228 DAASYITGQVIPVNGG 243

Length = 246

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  156 bits (395), Expect = 6e-47
 Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 18/252 (7%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCS 67
            L GKVAL+TG + GIG   AR  ++ GA+ V+ A   ++            +      +
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGG-RAA 60

Query: 68  YVHCDVT-KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
            V  DV+  E+ +E  V  A  ++G++DI+ NNAG      P + +  + +++R++ +NL
Sbjct: 61  AVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAP-LEELTEEDWDRVIDVNL 119

Query: 127 VGAFLGRNMLLGVC------------GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           +GAFL     L +             G+ G     AY +SK  L+GL K  A+EL   GI
Sbjct: 120 LGAFLLTRAALPLMKKQRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPRGI 179

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYS-NLKGAVLEPEDAAEAALYLGSD-ESKCV 232
           RVN V+P  + TP+         + L  + +    G +  PE+ A A  +L SD  +  +
Sbjct: 180 RVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAASYI 239

Query: 233 SGHNLVVDGGFA 244
           +G  L VDGG  
Sbjct: 240 TGQTLPVDGGLL 251

Length = 251

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  154 bits (390), Expect = 4e-46
 Identities = 84/254 (33%), Positives = 129/254 (50%), Gaps = 25/254 (9%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           + +RL G+VA+ITGG  GIG  TAR  +  GA V++ DI  + G++   ++G        
Sbjct: 1   LSQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGG------- 53

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             +V  DVT E  +    +TA   YG +DI FNNAG       +IL+     ++R+  +N
Sbjct: 54  -LFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVN 112

Query: 126 LVGAFLG-----RNMLL-GVCGIIG--------GAATH--AYTSSKHGLLGLMKNTAVEL 169
           L   +L       +M+  G   II         G+AT   +YT+SK G+L + +   V+ 
Sbjct: 113 LTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQF 172

Query: 170 GRFGIRVNCVSPYAVSTPLAKD-FLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE 228
            R GIRVN + P  V+TPL ++ F K  +     +     G   EPE+ A A  +L SD+
Sbjct: 173 ARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDD 232

Query: 229 SKCVSGHNLVVDGG 242
           +  ++    +VDGG
Sbjct: 233 ASFITASTFLVDGG 246

Length = 255

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  152 bits (385), Expect = 3e-45
 Identities = 83/256 (32%), Positives = 123/256 (48%), Gaps = 22/256 (8%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M+ RL GKVAL+TG A+GIG   AR F++ GA V +AD+   L E     I    + A  
Sbjct: 1   MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGAR- 59

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              V  DVT    +  AV  A   +G LD++ NNAG    V  + L     ++ R  +++
Sbjct: 60  VLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGI--NVFADPLAMTDEDWRRCFAVD 117

Query: 126 LVGAFLGRNMLL------GVCGIIGGAATHA---------YTSSKHGLLGLMKNTAVELG 170
           L GA+ G   +L      G   I+  A+THA         Y  +KHGLLGL +   +E  
Sbjct: 118 LDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYA 177

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK----GAVLEPEDAAEAALYLGS 226
              +RVN ++P  + T L +D+     D        L       +  PE+ A  A++L S
Sbjct: 178 ARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLAS 237

Query: 227 DESKCVSGHNLVVDGG 242
           DE+  ++   + +DGG
Sbjct: 238 DEAPFINATCITIDGG 253

Length = 260

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  144 bits (366), Expect = 2e-42
 Identities = 87/255 (34%), Positives = 132/255 (51%), Gaps = 30/255 (11%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L GKVA++TGGA GIG   A LF+  GA+V + D  +D    V   +   ++       
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED-VAEVAAQLLGGNAKG----- 65

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           + CDV+  + +E AV   ++ +G++DI+ N+AG          D  + ++++ + INL G
Sbjct: 66  LVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPA--EDVSEEDWDKTIDINLKG 123

Query: 129 AFL-----GRNMLLGVCGIIGGAATH----------AYTSSKHGLLGLMKNTAVELGRFG 173
           +FL     GR+M+    G I   A+           AY +SK G++G+ K  A+E G +G
Sbjct: 124 SFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYG 183

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK---GAVLEPEDAAEAALYLGSDESK 230
           I VN +SP  V T L K     A  G  G  +      G    PE+ A AAL+L SD + 
Sbjct: 184 ITVNAISPTVVLTELGKK----AWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAA 239

Query: 231 CVSGHNLVVDGGFAI 245
            ++G NLV+DGG+ I
Sbjct: 240 MITGENLVIDGGYTI 254

Length = 255

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  143 bits (364), Expect = 5e-42
 Identities = 93/268 (34%), Positives = 134/268 (50%), Gaps = 48/268 (17%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKV------------LIADIKDDLGESVCKDI 56
           RL GKVA+ITG + GIG   A+LF++ GAKV            L+A+I+ + GE+V    
Sbjct: 3   RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVA--- 59

Query: 57  GSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQA 116
                       +  DV  E   +  V  AV ++G LDI FNNAGT+ E+ P + +    
Sbjct: 60  ------------LAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGP-VAEMSLE 106

Query: 117 EFERILSINLVGAFLGRN-----MLLGVCGII-----------GGAATHAYTSSKHGLLG 160
            +   L+ NL  AFLG       ML    G +           G     AY +SK GL+G
Sbjct: 107 GWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIG 166

Query: 161 LMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD--DGLGGMYSNLKGAVLEPEDAA 218
           L +  A E G  GIRVN + P    TP+ +      +    + G+++ LK  + +PE+ A
Sbjct: 167 LTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHA-LK-RMAQPEEIA 224

Query: 219 EAALYLGSDESKCVSGHNLVVDGGFAIV 246
           +AAL+L SD +  V+G  L+VDGG +I 
Sbjct: 225 QAALFLASDAASFVTGTALLVDGGVSIT 252

Length = 254

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  142 bits (360), Expect = 2e-41
 Identities = 80/271 (29%), Positives = 127/271 (46%), Gaps = 43/271 (15%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           +L+ L G   L+TGGA GIG   A  F++ GA+V + D+ +    +    +  +  +A  
Sbjct: 5   LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTA-- 62

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG------TVDEVKPNILDNDQAEFE 119
                 DV     +E   +TAV ++G LD++ NNAG       +DE+ P        ++E
Sbjct: 63  ---TVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITP-------EQWE 112

Query: 120 RILSINLVGAFL--------------GRNMLLG--VCGIIGGAATHAYTSSKHGLLGLMK 163
           + L++NL G F               G  ++    V G +G      Y +SK  ++GL+K
Sbjct: 113 QTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVK 172

Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLAK----DFLKLADDGLGGMYSN-LK----GAVLEP 214
           + A+ELG  GIRVN + P  V  P  +       +    GL  M    L+    G ++EP
Sbjct: 173 SLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEP 232

Query: 215 EDAAEAALYLGSDESKCVSGHNLVVDGGFAI 245
           ED A  AL+L S  ++ ++G  + VDG    
Sbjct: 233 EDIAATALFLASPAARYITGQAISVDGNVEY 263

Length = 264

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  141 bits (358), Expect = 3e-41
 Identities = 78/254 (30%), Positives = 125/254 (49%), Gaps = 26/254 (10%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSY 68
           L+GKVAL+TG + GIG+  A   +  GA V++      D  E V ++I +    A     
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIA--- 57

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  DV+KE+D+     +A+ ++G LDI+ NNAG +        +    ++ +++ +NL G
Sbjct: 58  VQADVSKEEDVVALFQSAIKEFGTLDILVNNAG-LQGDAS-SHEMTLEDWNKVIDVNLTG 115

Query: 129 AFLG---------RNMLLGVCGIIGGAATH---------AYTSSKHGLLGLMKNTAVELG 170
            FL          ++ + G   II  ++ H          Y +SK G+  + K  A E  
Sbjct: 116 QFLCAREAIKRFRKSKIKGK--IINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYA 173

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
             GIRVN ++P A++TP+  +     +     +     G + EPE+ A AA +L SDE+ 
Sbjct: 174 PKGIRVNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRIGEPEEIAAAAAWLASDEAS 233

Query: 231 CVSGHNLVVDGGFA 244
            V+G  L VDGG  
Sbjct: 234 YVTGTTLFVDGGMT 247

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  140 bits (355), Expect = 7e-41
 Identities = 77/260 (29%), Positives = 133/260 (51%), Gaps = 23/260 (8%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           R   KV ++TGG+RGIG    R F ++GAKV+     +  G+++  ++  + +    C +
Sbjct: 6   RYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESEL--NRAGPGSCKF 63

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V CDVTKE+DI+  ++  V ++G++D + NNAG     +    +    EF  +L++NL+ 
Sbjct: 64  VPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQT-TDETSAQEFRDLLNLNLIS 122

Query: 129 AFLGRNMLL--------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
            FL     L               + G IG      Y ++K  +  + K  AV+  R+G+
Sbjct: 123 YFLASKYALPHLRKSQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGV 182

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGL----GGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
           RVNC+SP  + TPL ++      D L     G  + L G +    ++  AAL+L ++ + 
Sbjct: 183 RVNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFLAAEATF 242

Query: 231 CVSGHNLVVDGGFAIVNAGF 250
           C +G +L++ GG A +  G+
Sbjct: 243 C-TGIDLLLSGG-AELGYGY 260

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  139 bits (353), Expect = 2e-40
 Identities = 84/264 (31%), Positives = 130/264 (49%), Gaps = 43/264 (16%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG-ESVCKDIGSSSSSASGCS 67
            L+GKVAL+TG +RGIG   A   +  GA V+I     + G E++  +IG     A G  
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIG-----ALGGK 56

Query: 68  Y--VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSI 124
              V  DV+  + +E AV+ A  ++G +DI+ NNAG T D     ++   + +++R++  
Sbjct: 57  ALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDN---LLMRMKEEDWDRVIDT 113

Query: 125 NLVGAFL--------------GR--NM--LLGVCGIIGGAATHAYTSSKHGLLGLMKNTA 166
           NL G F               GR  N+  ++G+ G  G A    Y +SK G++G  K+ A
Sbjct: 114 NLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQA---NYAASKAGVIGFTKSLA 170

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----EPEDAAEAAL 222
            EL   GI VN V+P  + T +      L +D    +   L    L    +PE+ A A  
Sbjct: 171 RELASRGITVNAVAPGFIETDM---TDALPEDVKEAI---LAQIPLGRLGQPEEIASAVA 224

Query: 223 YLGSDESKCVSGHNLVVDGGFAIV 246
           +L SDE+  ++G  L V+GG  + 
Sbjct: 225 FLASDEAAYITGQTLHVNGGMVMG 248

Length = 248

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  138 bits (349), Expect = 6e-40
 Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 27/248 (10%)

Query: 15  ALITGGARGIGECTARLFSKHGAKVLIADIKDD-LGESVCKDIGSSSSSASGCSYVHCDV 73
           AL+TG +RGIG   A   +K GAKV+I     +   E V +++ +    A G   V CDV
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALG---VVCDV 57

Query: 74  TKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAFL- 131
           +  +D++  V     + G +DI+ NNAG T D +   ++   + +++ ++  NL G F  
Sbjct: 58  SDREDVKAVVEEIEEELGPIDILVNNAGITRDNL---LMRMKEEDWDAVIDTNLTGVFNL 114

Query: 132 -------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVN 177
                        GR + +  V G++G A    Y +SK G++G  K+ A EL    I VN
Sbjct: 115 TQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVN 174

Query: 178 CVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKCVSGHN 236
            V+P  + T +     KL++     + S +  G    PE+ A A  +L SDE+  ++G  
Sbjct: 175 AVAPGFIDTDMTD---KLSEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQV 231

Query: 237 LVVDGGFA 244
           + VDGG  
Sbjct: 232 IHVDGGMY 239

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  137 bits (348), Expect = 1e-39
 Identities = 83/260 (31%), Positives = 125/260 (48%), Gaps = 36/260 (13%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
           GK AL+TG A GIG   AR  +  GA V++ D  ++  E+  K  G +  S         
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPA--- 57

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           DVTKE +I + +  A  ++G LDI+ NNAG +  V P I +    +++RI+++ L  AF 
Sbjct: 58  DVTKEDEIADMIAAAAAEFGGLDILVNNAG-IQHVAP-IEEFPPEDWDRIIAVMLTSAFH 115

Query: 132 --------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV 176
                         GR + +    G++      AY ++KHGL+GL K  A+E+   GI V
Sbjct: 116 TIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITV 175

Query: 177 NCVSPYAVSTPL-AKDFLKLA------------DDGLGGMYSNLKGAVLEPEDAAEAALY 223
           N + P  V TPL  K     A            +  L G         +  ++ AE ALY
Sbjct: 176 NAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQ---PTKRFVTVDEVAETALY 232

Query: 224 LGSDESKCVSGHNLVVDGGF 243
           L SD +  ++G  +V+DGG+
Sbjct: 233 LASDAAAQITGQAIVLDGGW 252

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  137 bits (346), Expect = 2e-39
 Identities = 81/258 (31%), Positives = 124/258 (48%), Gaps = 40/258 (15%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+GKVAL+TG +RGIG   A   ++ GA ++I    ++  E   + I          +  
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLI---EKEGVEATAF 59

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
            CDV+ E+ I+ AV      +GK+DI+ NNAG +   +    +  +AE+  ++ +NL G 
Sbjct: 60  TCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGII--RRHPAEEFPEAEWRDVIDVNLNGV 117

Query: 130 FL-----GRNML-------LGVCGI---IGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F       R+M+       + +C +   +GG    AY +SK G+ GL K  A E  R GI
Sbjct: 118 FFVSQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGI 177

Query: 175 RVNCVSPYAVSTPLA----------KDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL 224
           +VN ++P   +T +            D LK    G  G          +PED   AA++L
Sbjct: 178 QVNAIAPGYFATEMTEAVVADPEFNDDILKRIPAGRWG----------QPEDLVGAAVFL 227

Query: 225 GSDESKCVSGHNLVVDGG 242
            SD S  V+G  + VDGG
Sbjct: 228 ASDASDYVNGQIIFVDGG 245

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  135 bits (343), Expect = 3e-39
 Identities = 72/247 (29%), Positives = 120/247 (48%), Gaps = 26/247 (10%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           KVAL+TG +RGIG   A   +  GAKV + D  ++      ++I +   +A+    +  D
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAA---LEAD 57

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAFL 131
           V+  + +E  V     ++G +DI+ NNAG T D +   + + D   ++ ++++NL G F 
Sbjct: 58  VSDREAVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEED---WDAVINVNLTGVFN 114

Query: 132 --------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV 176
                         GR + +  V G+IG      Y +SK G++G  K+ A EL   GI V
Sbjct: 115 VTQAVIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITV 174

Query: 177 NCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKCVSGH 235
           N V+P  + T +      L +     +   +    L  PE+ A A  +L SD++  ++G 
Sbjct: 175 NAVAPGFIDTDMTD---ALPEKVKEKILKQIPLGRLGTPEEVANAVAFLASDDASYITGQ 231

Query: 236 NLVVDGG 242
            L V+GG
Sbjct: 232 VLHVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  135 bits (342), Expect = 6e-39
 Identities = 84/255 (32%), Positives = 136/255 (53%), Gaps = 31/255 (12%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+GKVA ITGG  GIG+  A+ F++ GA V IA  K ++ E+  ++I  SS++      +
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEI--SSATGGRAHPI 58

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERILSI 124
            CDV   + +E AV+  + ++GK+DI+ NNA        + + PN        F+ ++ I
Sbjct: 59  QCDVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPN-------GFKTVIDI 111

Query: 125 NLVGAF-----LGRNMLLGVCG--IIGGAATHAYT---------SSKHGLLGLMKNTAVE 168
           +L G F     +G+ ++    G  I+  +AT+AYT         ++K G+  L ++ AVE
Sbjct: 112 DLNGTFNTTKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVE 171

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSD 227
            G +GIRVN ++P  + T    + L  +      M   +  G +  PE+ A  AL+L SD
Sbjct: 172 WGPYGIRVNAIAPGPIPTTEGMERLAPSGKSEKKMIERVPLGRLGTPEEIANLALFLLSD 231

Query: 228 ESKCVSGHNLVVDGG 242
            +  ++G  LVVDGG
Sbjct: 232 AASYINGTTLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  136 bits (343), Expect = 7e-39
 Identities = 78/256 (30%), Positives = 137/256 (53%), Gaps = 25/256 (9%)

Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGC 66
           ++RL+ KVA+ITG + GIG+ +A   ++ GA VL  DI + + E+V   I S+   A   
Sbjct: 1   MKRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETV-DKIKSNGGKAKA- 58

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
              H D++ E+ +++  +    Q+G++D++FNNAG VD     I +     F++I+++++
Sbjct: 59  --YHVDISDEQQVKDFASEIKEQFGRVDVLFNNAG-VDNAAGRIHEYPVDVFDKIMAVDM 115

Query: 127 VGAFLGRNMLLGVCGIIGGAATH--------------AYTSSKHGLLGLMKNTAVELGRF 172
            G FL   MLL +    GG+  +               Y ++K  ++   K+ A+E GR 
Sbjct: 116 RGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRD 175

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLK-----GAVLEPEDAAEAALYLGS 226
           GIR N ++P  + TPL       ++D  G  +  N K     G + +PE+ A+  ++L S
Sbjct: 176 GIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLAS 235

Query: 227 DESKCVSGHNLVVDGG 242
           D+S  ++G  + +DGG
Sbjct: 236 DDSSFITGETIRIDGG 251

Length = 272

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  135 bits (341), Expect = 1e-38
 Identities = 87/265 (32%), Positives = 125/265 (47%), Gaps = 43/265 (16%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
            RLQGKVAL+TG A GIGE  A  +   GA+V+IADIK         +IG          
Sbjct: 2   MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG------PAAI 55

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
            V  DVT++  I+  V  AV ++G +DI+FNNA   D + P ILD  +  ++R+ ++N+ 
Sbjct: 56  AVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFD-MAP-ILDISRDSYDRLFAVNVK 113

Query: 128 GAF-----LGRNMLLGVCG--II---------GGAATHAYTSSKHGLLGLMKNTAVELGR 171
           G F     + R+M+    G  II         G A    Y ++K  ++   ++ A+ L R
Sbjct: 114 GLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIR 173

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-----KGAVLE---------PEDA 217
            GI VN ++P  V TP+         D L   Y N      K  V E         P+D 
Sbjct: 174 HGINVNAIAPGVVDTPMWDQV-----DALFARYENRPPGEKKRLVGEAVPLGRMGVPDDL 228

Query: 218 AEAALYLGSDESKCVSGHNLVVDGG 242
              AL+L S ++  +      VDGG
Sbjct: 229 TGMALFLASADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  134 bits (339), Expect = 2e-38
 Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 22/252 (8%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L GKVA+ITG + GIG  TA LF++ GA++ +     +  E   +    +  S      V
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             D+T+E+  +  ++T + ++G+LDI+ NNAG +   K    D D  E+++++++NL   
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGIL--AKGGGEDQDIEEYDKVMNLNLRAV 118

Query: 130 FLGRNMLL--------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
                + +               V G         Y  SK  L    + TA+EL   G+R
Sbjct: 119 IYLTKLAVPHLIKTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGVR 178

Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-----GAVLEPEDAAEAALYLGSDESK 230
           VN VSP  + T   +  + + ++      S  K     G     ++ AEA  +L SD S 
Sbjct: 179 VNSVSPGVIVTGFHRR-MGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAFLASDASS 237

Query: 231 CVSGHNLVVDGG 242
            ++G  L VDGG
Sbjct: 238 FITGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  140 bits (356), Expect = 3e-38
 Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 34/261 (13%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L GKVAL+TG A GIG+ TA+  +  GA V++AD+ ++  E+   ++G    +      V
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALG----V 475

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
            CDVT E  ++ A   A   +G +DI+ +NAG +    P I +    ++ R   +N  G 
Sbjct: 476 ACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG-IAISGP-IEETSDEDWRRSFDVNATGH 533

Query: 130 FL--------------GRNMLLGVC--GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
           FL              G +++       +  G    AY ++K   L L++  A+ELG  G
Sbjct: 534 FLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDG 593

Query: 174 IRVNCVSPYAV---STPLAKDFLK-------LADDGLGGMYS--NLKGAVLEPEDAAEAA 221
           IRVN V+P AV   S     ++++       L+++ L   Y   NL    + PED AEA 
Sbjct: 594 IRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAV 653

Query: 222 LYLGSDESKCVSGHNLVVDGG 242
           ++L S      +G  + VDGG
Sbjct: 654 VFLASGLLSKTTGAIITVDGG 674

Length = 681

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  132 bits (334), Expect = 1e-37
 Identities = 80/253 (31%), Positives = 125/253 (49%), Gaps = 29/253 (11%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIGSSSSSASGCS 67
            L G+VAL+TG ARG+G   A   ++ GA V++     ++  E + + + +    A    
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQ--- 59

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
            V  DVT +  +E AV  AV ++G++DI+ NNAG + E KP + D    E++ ++ +NL 
Sbjct: 60  AVQADVTDKAALEAAVAAAVERFGRIDILVNNAG-IFEDKP-LADMSDDEWDEVIDVNLS 117

Query: 128 GAFL--------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           G F               GR + +  V G+ G      Y ++K GL+GL K  A EL  +
Sbjct: 118 GVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEY 177

Query: 173 GIRVNCVSPYAVSTPLAK---DFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES 229
           GI VN V+P  + T + +   +  + A D    +     G    PED A A  +L SD S
Sbjct: 178 GITVNMVAPGDIDTDMKEATIEEAREAKDAETPL-----GRSGTPEDIARAVAFLCSDAS 232

Query: 230 KCVSGHNLVVDGG 242
             ++G  + V GG
Sbjct: 233 DYITGQVIEVTGG 245

Length = 249

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  130 bits (328), Expect = 9e-37
 Identities = 84/258 (32%), Positives = 128/258 (49%), Gaps = 30/258 (11%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG-ESVCKDIGSSSSSAS 64
           M   L+GKV +ITGG+ G+G   A  F K  AKV+I    D+     V ++I  +   A 
Sbjct: 1   MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAI 60

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
               V  DVT E D+ N + TAV ++G LD+M NNAG  + V  + +  +  ++ ++++ 
Sbjct: 61  A---VKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLE--DWNKVINT 115

Query: 125 NLVGAFLGRNMLLGVC-------GIIGGAATH---------AYTSSKHGLLGLMKNTAVE 168
           NL GAFLG    +           II  ++ H          Y +SK G+  + +  A+E
Sbjct: 116 NLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAME 175

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLAD----DGLGGMYSNLKGAVLEPEDAAEAALYL 224
               GIRVN + P A++TP+  +  K AD      +  M     G + +PE+ A  A +L
Sbjct: 176 YAPKGIRVNNIGPGAINTPINAE--KFADPKQRADVESMIP--MGYIGKPEEIAAVAAWL 231

Query: 225 GSDESKCVSGHNLVVDGG 242
            S E+  V+G  L  DGG
Sbjct: 232 ASSEASYVTGITLFADGG 249

Length = 261

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  129 bits (327), Expect = 2e-36
 Identities = 77/260 (29%), Positives = 120/260 (46%), Gaps = 35/260 (13%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
             L GKVA++TGGA  IG   AR     GA+V I DI  D G +V   +G          
Sbjct: 2   IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG------ERAR 55

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
           ++  D+T +  IE AV T V ++G++DI+ N A T  +   + L + +A++   L +NLV
Sbjct: 56  FIATDITDDAAIERAVATVVARFGRVDILVNLACTYLD---DGLASSRADWLAALDVNLV 112

Query: 128 GAFLGRNMLLGVC--------------GIIGGAATHA----YTSSKHGLLGLMKNTAVEL 169
            A     ML                    I           Y +SK  +  L ++ A++L
Sbjct: 113 SAA----MLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDL 168

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFL---KLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS 226
              GIRVN VSP    + +  +     +   D +   +  L G V +PE+ A+   +L S
Sbjct: 169 APDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLL-GRVGDPEEVAQVVAFLCS 227

Query: 227 DESKCVSGHNLVVDGGFAIV 246
           D +  V+G +  VDGG++ +
Sbjct: 228 DAASFVTGADYAVDGGYSAL 247

Length = 261

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  129 bits (326), Expect = 2e-36
 Identities = 80/257 (31%), Positives = 129/257 (50%), Gaps = 27/257 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL G+VA++TG   GIG  TA+LF++ GA+V++AD   +  E V   I     +A G ++
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAI-----AAGGRAF 56

Query: 69  VH-CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
               DV   + +E  V+    ++G+LD++ NNAG        ++  D+A+++ ++ +N+ 
Sbjct: 57  ARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFG--CGGTVVTTDEADWDAVMRVNVG 114

Query: 128 GAFLGRNMLL------GVCGII---------GGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           G FL     +      G   I+         GG    AY +SK  +  L +  A++    
Sbjct: 115 GVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATD 174

Query: 173 GIRVNCVSPYAVSTP-LAKDFLKLADDGLGGMYSNLKGAVL---EPEDAAEAALYLGSDE 228
           GIRVN V+P  + TP   + F + AD          +  +      E+ A+AAL+L SDE
Sbjct: 175 GIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDE 234

Query: 229 SKCVSGHNLVVDGGFAI 245
           S   +G  LVVDGG+  
Sbjct: 235 SSFATGTTLVVDGGWLA 251

Length = 252

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  128 bits (324), Expect = 3e-36
 Identities = 84/253 (33%), Positives = 126/253 (49%), Gaps = 27/253 (10%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+GKVA++TG   GIG   A   ++ GA+V++ADI     ++V   I      A G   +
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQI------AGGALAL 54

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             DVT E+ +      AV ++G LD++ NNAG +  + P I+D D A +++ ++INL G 
Sbjct: 55  RVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAM-HLTPAIIDTDLAVWDQTMAINLRGT 113

Query: 130 FL--------------GRNMLLGVC-GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           FL              G  + L    G  G     AY +SK  +  L +  A EL   GI
Sbjct: 114 FLCCRHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGI 173

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGG-----MYSNLKGAVLEPEDAAEAALYLGSDES 229
           R N ++P  + TPL    L   +  LG      +   L+G +  PED A A ++L SD++
Sbjct: 174 RCNALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFLLSDDA 233

Query: 230 KCVSGHNLVVDGG 242
             ++G  L VDGG
Sbjct: 234 SFITGQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  128 bits (323), Expect = 5e-36
 Identities = 76/258 (29%), Positives = 129/258 (50%), Gaps = 33/258 (12%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSY-V 69
            KVA+ITG A+GIG   A   +  G  +++AD+  ++  +S  ++I    S A   +  V
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEI----SEAGYNAVAV 57

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             DVT + D+E  ++ AV ++G  D+M NNAG +  + P +L   + + +++ ++N+ G 
Sbjct: 58  GADVTDKDDVEALIDQAVEKFGSFDVMVNNAG-IAPITP-LLTITEEDLKKVYAVNVFGV 115

Query: 130 FLG-----RNML-LGVCGIIGGAATHA----------YTSSKHGLLGLMKNTAVELGRFG 173
             G     R    LG  G I  A++ A          Y++SK  + GL +  A EL   G
Sbjct: 116 LFGIQAAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKG 175

Query: 174 IRVNCVSPYAVSTPL----AKDFLKLADDGLGGMYSNL-----KGAVLEPEDAAEAALYL 224
           I VN  +P  V T +     ++  ++A    G  ++        G + EPED A    +L
Sbjct: 176 ITVNAYAPGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVAGLVSFL 235

Query: 225 GSDESKCVSGHNLVVDGG 242
            S++S  ++G  ++VDGG
Sbjct: 236 ASEDSDYITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  126 bits (317), Expect = 4e-35
 Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 30/255 (11%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           KVAL+TGGA+GIG+  A   +K G  V +AD+ ++  +   K+I  +   A        D
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKA---VAYKLD 57

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG 132
           V+ +  + +A++ A  ++G  D+M NNAG V  + P IL+  + E +++ ++N+ G   G
Sbjct: 58  VSDKDQVFSAIDQAAEKFGGFDVMVNNAG-VAPITP-ILEITEEELKKVYNVNVKGVLFG 115

Query: 133 -------------RNMLLGVC---GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV 176
                           ++      G  G     AY+S+K  + GL +  A EL   GI V
Sbjct: 116 IQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITV 175

Query: 177 NCVSPYAVSTPL----AKDFLKLADDGLGGMYSNLK-----GAVLEPEDAAEAALYLGSD 227
           N   P  V TP+     ++  ++A   +G  +         G   EPED A    +L S+
Sbjct: 176 NAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASE 235

Query: 228 ESKCVSGHNLVVDGG 242
           +S  ++G +++VDGG
Sbjct: 236 DSDYITGQSILVDGG 250

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  125 bits (315), Expect = 6e-35
 Identities = 74/237 (31%), Positives = 112/237 (47%), Gaps = 28/237 (11%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           KVA+ITGGA GIG  TA+L  K GAKV I D  ++ G         + +     ++V CD
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPG---AAAELQAINPKVKATFVQCD 57

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG 132
           VT  + +  A   A+ ++G++DI+ NNAG +DE            +E+ + +NL G    
Sbjct: 58  VTSWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINT 117

Query: 133 RNMLL-----------GVCGIIGGAATH-------AYTSSKHGLLGLMKNTAVEL-GRFG 173
             + L           GV   IG  A          Y++SKHG++G  ++ A  L  + G
Sbjct: 118 TYLALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTG 177

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
           +RVN + P   +TPL  D +    +    M  +       PE  A+A +YL  D+ K
Sbjct: 178 VRVNAICPGFTNTPLLPDLVAKEAE----MLPSAP--TQSPEVVAKAIVYLIEDDEK 228

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  125 bits (315), Expect = 6e-35
 Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 25/255 (9%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
            + KV LITGG  G+G  TA   +K GAK+ + D+ ++  E+    +   +  A     +
Sbjct: 1   FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLL-I 59

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVG 128
             DV+ E  +E  V+  V Q+G++D  FNNAG   E K N+ ++    EF++++SINL G
Sbjct: 60  KADVSDEAQVEAYVDATVEQFGRIDGFFNNAGI--EGKQNLTEDFGADEFDKVVSINLRG 117

Query: 129 AFLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F G   +L                V GI G      Y ++KHG++GL +N+AVE G++G
Sbjct: 118 VFYGLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYG 177

Query: 174 IRVNCVSPYAVSTPLAKDFLKLAD----DGLGGMYS--NLKGAVLEPEDAAEAALYLGSD 227
           IR+N ++P A+ TP+ +  LK       +  G  +   N      EPE+ A    +L SD
Sbjct: 178 IRINAIAPGAILTPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEVAAVVAFLLSD 237

Query: 228 ESKCVSGHNLVVDGG 242
           ++  V+   + +DGG
Sbjct: 238 DAGYVNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  130 bits (328), Expect = 7e-35
 Identities = 74/260 (28%), Positives = 118/260 (45%), Gaps = 29/260 (11%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
            + Q +V L+TG A GIG    + F++ G +V++AD   +        +G    +     
Sbjct: 1   SKAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHA----- 55

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
            +  DV+ E  I         ++G++D++ NNAG  D      LD    EF R+ +INL 
Sbjct: 56  -LAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLT 114

Query: 128 GAFL-----GRNMLLGV-----------CGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           GA+L      R M+               G++      AY++SK  ++ L ++ A E   
Sbjct: 115 GAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAA 174

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK----GAVLEPEDAAEAALYLGSD 227
            GIRVN V P  V T +  +   L   G     +       G +  PE+ AEA  +L SD
Sbjct: 175 KGIRVNAVLPGYVRTQMVAE---LERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASD 231

Query: 228 ESKCVSGHNLVVDGGFAIVN 247
           ++  ++G  LVVDGG+ +  
Sbjct: 232 QASYITGSTLVVDGGWTVYG 251

Length = 520

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  124 bits (314), Expect = 1e-34
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 28/256 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           +L GK ALITG  +GIGE  AR+F++HGA +++ DI  ++ E +  ++       +    
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTA--- 58

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  DV     +  A+  A  + G++DI+ NNAG       + LD    + +  + IN+ G
Sbjct: 59  VVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVC--RLGSFLDMSDEDRDFHIDINIKG 116

Query: 129 AF----------LGRN-----MLLGVCG-IIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            +          + R      M+  V G ++      AY  +K  ++GL K+ AVE  + 
Sbjct: 117 VWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQS 176

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLAD-----DGLGGMYSNLK-GAVLEPEDAAEAALYLGS 226
           GIRVN + P  V TP+A+   + ++       L  M   +    + +P +  E A +L S
Sbjct: 177 GIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLAS 236

Query: 227 DESKCVSGHNLVVDGG 242
           DES  ++G   V+DGG
Sbjct: 237 DESSYLTGTQNVIDGG 252

Length = 263

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  124 bits (314), Expect = 1e-34
 Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 31/256 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L+GKVA++TGG+RGIG   AR  ++ GA V I        E   +++  +         
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEEL--AKKYGVKTKA 62

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
             CDV+ ++ +E         +GK+DI+  NAG +   KP  LD    ++ +++ +NL G
Sbjct: 63  YKCDVSSQESVEKTFKQIQKDFGKIDILIANAG-ITVHKP-ALDYTYEQWNKVIDVNLNG 120

Query: 129 AF-----LGRNMLLGVCG---IIGGAATH---------AYTSSKHGLLGLMKNTAVELGR 171
            F       +       G   I    +           AY +SK  ++ L K+ AVE  +
Sbjct: 121 VFNCAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAK 180

Query: 172 FGIRVNCVSPYAVSTPLA----KDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD 227
           + IRVN +SP  + T L     K+  K  +  +          +  PE+   A LYL SD
Sbjct: 181 YFIRVNSISPGYIDTDLTDFVDKELRKKWESYI------PLKRIALPEELVGAYLYLASD 234

Query: 228 ESKCVSGHNLVVDGGF 243
            S   +G +L++DGG+
Sbjct: 235 ASSYTTGSDLIIDGGY 250

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  124 bits (314), Expect = 1e-34
 Identities = 92/262 (35%), Positives = 125/262 (47%), Gaps = 43/262 (16%)

Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLI--------ADIKDDLGESVCKDIGS 58
           + RLQGK ALITGG  GIG  TAR F   GA+V I           + +LGES    +  
Sbjct: 1   MSRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESA---LVI 57

Query: 59  SSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEF 118
            + +         DV  +K +  A+  A   +G+LD +F NAG      P + D D+A F
Sbjct: 58  RADAG--------DVAAQKALAQALAEA---FGRLDAVFINAGVAK-FAP-LEDWDEAMF 104

Query: 119 ERILSINLVGAFLGRNMLLGV---------CGI----IGGAATHAYTSSKHGLLGLMKNT 165
           +R  + N+ G +     LL +          G     IG   +  Y +SK  LL L K  
Sbjct: 105 DRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTL 164

Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-----EPEDAAEA 220
           + EL   GIRVN VSP  V TPL    L L +  L  + + ++  V       PE+ A+A
Sbjct: 165 SGELLPRGIRVNAVSPGPVQTPLY-GKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKA 223

Query: 221 ALYLGSDESKCVSGHNLVVDGG 242
            LYL SDES  + G  ++VDGG
Sbjct: 224 VLYLASDESAFIVGSEIIVDGG 245

Length = 249

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  124 bits (313), Expect = 2e-34
 Identities = 81/267 (30%), Positives = 121/267 (45%), Gaps = 34/267 (12%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+GKVA ITG ARG G   A   +  GA ++  D+   L +     + +          V
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 70  ----------HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFE 119
                       DV    ++   V   V Q+G+LD++  NAG +   +   L  +Q  ++
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQ--WD 118

Query: 120 RILSINLVGAFL---------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMK 163
            +L INL G +                G  ++   V G+        Y ++KHGL+GL K
Sbjct: 119 TVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTK 178

Query: 164 NTAVELGRFGIRVNCVSPYAVSTPL------AKDFLKLADDGLGGMYSNLKGAVLEPEDA 217
             A EL  +GIRVN + PY+V TP+       + FLK  +     M +      + PED 
Sbjct: 179 TLANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALPVSGFVPPEDV 238

Query: 218 AEAALYLGSDESKCVSGHNLVVDGGFA 244
           A+A L+L SDES+ ++GH L VD G  
Sbjct: 239 ADAVLWLASDESRYITGHQLPVDAGAL 265

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  122 bits (309), Expect = 6e-34
 Identities = 79/254 (31%), Positives = 122/254 (48%), Gaps = 26/254 (10%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+GK+ALITG + GIG   A+ ++K GA ++  DI  +L +            A G  YV
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHG--YV 65

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
            CDVT E  ++  V+    + G +DI+ NNAG +  +   +L+    +F +++ I+L   
Sbjct: 66  -CDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIP--MLEMSAEDFRQVIDIDLNAP 122

Query: 130 FL------------GRNMLLGVCGI---IGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F+            G   ++ +C +   +G     AY ++K GL  L KN A E G   I
Sbjct: 123 FIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANI 182

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL------KGAVLEPEDAAEAALYLGSDE 228
           + N + P  ++TP      +L  DG    +              +PED A  A++L SD 
Sbjct: 183 QCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDA 242

Query: 229 SKCVSGHNLVVDGG 242
           S  V+GH L VDGG
Sbjct: 243 SNFVNGHILYVDGG 256

Length = 265

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  120 bits (303), Expect = 4e-33
 Identities = 76/258 (29%), Positives = 119/258 (46%), Gaps = 30/258 (11%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVH 70
           GKVAL+TG   GIG   AR  +  GA +++    D    E+V   + +         Y  
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVL--YHG 59

Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF 130
            D++K   IE+ V  A  Q+G +DI+ NNAG +  V P I D    +++ I+++NL   F
Sbjct: 60  ADLSKPAAIEDMVAYAQRQFGGVDILVNNAG-IQHVAP-IEDFPTEKWDAIIALNLSAVF 117

Query: 131 LGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
               + L                V G++  A   AY ++KHG++GL K  A+E    G+ 
Sbjct: 118 HTTRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVT 177

Query: 176 VNCVSPYAVSTPLAKDFLK-LADDGLGGMYSNLKGAVLE---------PEDAAEAALYLG 225
            N + P  V TPL +  +  LA           +  +LE         PE   + A++L 
Sbjct: 178 CNAICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGDTAVFLA 237

Query: 226 SDESKCVSGHNLVVDGGF 243
           SD +  ++G  + VDGG+
Sbjct: 238 SDAASQITGTAVSVDGGW 255

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  120 bits (302), Expect = 4e-33
 Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 34/255 (13%)

Query: 11  QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVH 70
            GKVALIT  A+GIG   A  F++ GA V+  DI ++  + + +          G +   
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELER--------GPGITTRV 52

Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN----- 125
            DVT ++ +         + G++D++FN AG V     +ILD +  +++  +++N     
Sbjct: 53  LDVTDKEQVAALAK----EEGRIDVLFNCAGFVHH--GSILDCEDDDWDFAMNLNVRSMY 106

Query: 126 -LVGAFL--------GR--NMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
            ++ A L        G   NM      I G      Y+++K  ++GL K+ A +  + GI
Sbjct: 107 LMIKAVLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGI 166

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK----GAVLEPEDAAEAALYLGSDESK 230
           R N + P  V TP  ++ ++   D    + +       G +  PE+ A  A+YL SDES 
Sbjct: 167 RCNAICPGTVDTPSLEERIQAQPDPEEALKAFAARQPLGRLATPEEVAALAVYLASDESA 226

Query: 231 CVSGHNLVVDGGFAI 245
            V+G  +V+DGG+++
Sbjct: 227 YVTGTAVVIDGGWSL 241

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  119 bits (301), Expect = 8e-33
 Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 28/252 (11%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL GK A+ITG   GIG+  A  F+  GA V+++DI  D    V  +I      A  C  
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACR- 66

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
             CD+T E+++    + A+++ GK+DI+ NNAG      P   D   A+F R   +N+  
Sbjct: 67  --CDITSEQELSALADFALSKLGKVDILVNNAGGGG---PKPFDMPMADFRRAYELNVFS 121

Query: 129 AF------------LGRNMLLGVCGIIG---GAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F             G  ++L +  +          +Y SSK     L++N A +LG   
Sbjct: 122 FFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKN 181

Query: 174 IRVNCVSPYAVSTPLAKDFLK--LADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESK 230
           IRVN ++P A+ T    D LK  +  +    M  +     L +P+D A AAL+L S  + 
Sbjct: 182 IRVNGIAPGAILT----DALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAAS 237

Query: 231 CVSGHNLVVDGG 242
            VSG  L V GG
Sbjct: 238 WVSGQILTVSGG 249

Length = 255

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  119 bits (300), Expect = 1e-32
 Identities = 71/254 (27%), Positives = 113/254 (44%), Gaps = 29/254 (11%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L GK AL+TG ARG+G   A   ++ GA V   D        +   + ++   A     +
Sbjct: 5   LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHA---I 61

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             D+     ++   + A    G LD + NNAG  +    +  + D   ++ ++++N+ G 
Sbjct: 62  AADLADPASVQRFFDAAAAALGGLDGLVNNAGITN--SKSATELDIDTWDAVMNVNVRGT 119

Query: 130 FL-----GRNMLLGVCGII----------GGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           FL       ++     G I          G     AY +SK  ++G+ ++ A ELG  GI
Sbjct: 120 FLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGI 179

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE----PEDAAEAALYLGSDESK 230
            VN ++P   +T        +  D     Y  LKG  LE    P+D A A L+L SD ++
Sbjct: 180 TVNAIAPGLTATEA---TAYVPADERHAYY--LKGRALERLQVPDDVAGAVLFLLSDAAR 234

Query: 231 CVSGHNLVVDGGFA 244
            V+G  L V+GGF 
Sbjct: 235 FVTGQLLPVNGGFV 248

Length = 250

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  118 bits (298), Expect = 2e-32
 Identities = 71/249 (28%), Positives = 105/249 (42%), Gaps = 40/249 (16%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
            K  LITG A GIG   AR F   GA+V   D +D                +    ++  
Sbjct: 5   TKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK------------PDLSGNFHFLQL 52

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           D++      + +         +DI+ N AG +D+ KP +LD    E++ I   NL   FL
Sbjct: 53  DLS------DDLEPLFDWVPSVDILCNTAGILDDYKP-LLDTSLEEWQHIFDTNLTSTFL 105

Query: 132 GRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV 176
                L                +   + G    AYT+SKH L G  K  A++  + GI+V
Sbjct: 106 LTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQV 165

Query: 177 NCVSPYAVSTPL-AKDFLKLADDGLGGMYSNLK--GAVLEPEDAAEAALYLGSDESKCVS 233
             ++P AV TP+ A DF      GL    +         EPE+ AE  L+L S ++  + 
Sbjct: 166 FGIAPGAVKTPMTAADF---EPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQ 222

Query: 234 GHNLVVDGG 242
           G  + +DGG
Sbjct: 223 GTIVPIDGG 231

Length = 235

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  119 bits (299), Expect = 2e-32
 Identities = 78/264 (29%), Positives = 126/264 (47%), Gaps = 31/264 (11%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M+  L GK A++TG A GIG+  A   ++ GA V IAD+  D   +V  +I  +   A G
Sbjct: 1   MMSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIG 60

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              V  DVT E  +   ++    ++G +DI+ +NAG +  V P I +   A+++++ +I+
Sbjct: 61  ---VAMDVTNEDAVNAGIDKVAERFGSVDILVSNAG-IQIVNP-IENYSFADWKKMQAIH 115

Query: 126 LVGAFL---------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           + GAFL               G  + +G V          AY ++KHGLLGL +  A E 
Sbjct: 116 VDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEG 175

Query: 170 GRFGIRVNCVSPYAVSTPL--------AKDFLKLADDGLGGMYSN--LKGAVLEPEDAAE 219
            +  +R + V P  V TPL        AK+     ++ +  +     + G     ED A+
Sbjct: 176 AKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQ 235

Query: 220 AALYLGSDESKCVSGHNLVVDGGF 243
             L+L S  S  ++G + VV  G+
Sbjct: 236 TVLFLSSFPSAALTGQSFVVSHGW 259

Length = 262

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  118 bits (298), Expect = 2e-32
 Identities = 76/255 (29%), Positives = 117/255 (45%), Gaps = 27/255 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           R   KVA++TG A GIG+  A   ++ GA V++ADI  +  E V K I +   +A     
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTA---IA 59

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLV 127
           V  DV+     +   +  V+ +G +D + NNA     +K ++L       +++ +S+NL 
Sbjct: 60  VQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLD 119

Query: 128 GAFLGRNMLL------GVCGIIGGAATHA------YTSSKHGLLGLMKNTAVELGRFGIR 175
           GA +    +       G   I+  ++T A      Y  +K GL GL +  A ELG   IR
Sbjct: 120 GALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSNFYGLAKVGLNGLTQQLARELGGMNIR 179

Query: 176 VNCVSP-----YAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
           VN ++P      A  T   K+F+     G+             PED     L+L SDE+ 
Sbjct: 180 VNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMG------TPEDLVGMCLFLLSDEAS 233

Query: 231 CVSGHNLVVDGGFAI 245
            ++G    VDGG  I
Sbjct: 234 WITGQIFNVDGGQII 248

Length = 250

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  118 bits (298), Expect = 2e-32
 Identities = 74/251 (29%), Positives = 114/251 (45%), Gaps = 26/251 (10%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLI--ADIKDDLGESVCKDIGSSSSSASGCS 67
           L GKVAL+TG +RGIG   A+  ++ GA V++  A  K    E V  +I ++   A    
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAA-AEEVVAEIEAAGGKAIA-- 57

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
            V  DV+    +    + A   +G +DI+ NNAG +   K  I +  + EF+R+ ++N  
Sbjct: 58  -VQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVML--KKPIAETSEEEFDRMFTVNTK 114

Query: 128 GAFL------------GRNMLLGVCGIIGGAATH-AYTSSKHGLLGLMKNTAVELGRFGI 174
           GAF             GR + +           + AY  SK  +    +  A ELG  GI
Sbjct: 115 GAFFVLQEAAKRLRDGGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGI 174

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMY--SNLKGAVLEPEDAAEAALYLGSDESKCV 232
            VN V+P  V T +   F     +     Y   +  G + EPED A    +L S + + V
Sbjct: 175 TVNAVAPGPVDTDM---FYAGKTEEAVEGYAKMSPLGRLGEPEDIAPVVAFLASPDGRWV 231

Query: 233 SGHNLVVDGGF 243
           +G  +  +GG+
Sbjct: 232 NGQVIRANGGY 242

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  118 bits (297), Expect = 2e-32
 Identities = 70/255 (27%), Positives = 106/255 (41%), Gaps = 34/255 (13%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSAS 64
           M   LQGKV  ITGG  G+G  TA   +  GA+V +       L +++          A 
Sbjct: 1   MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTL------PGVPAD 54

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
                  D+   +    AV+    Q+G+LD + N AG    V   I D D   ++R+  +
Sbjct: 55  ALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAF--VWGTIADGDADTWDRMYGV 112

Query: 125 NLVGAFL--------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           N+                   GR + +G    +  G    AY ++K G+  L +  A EL
Sbjct: 113 NVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAEL 172

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES 229
              GI VN V P  + TP  +  +  AD              + PE  A    +L SDE+
Sbjct: 173 LDRGITVNAVLPSIIDTPPNRADMPDAD----------FSRWVTPEQIAAVIAFLLSDEA 222

Query: 230 KCVSGHNLVVDGGFA 244
           + ++G ++ VDGG A
Sbjct: 223 QAITGASIPVDGGVA 237

Length = 239

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  117 bits (295), Expect = 5e-32
 Identities = 76/253 (30%), Positives = 112/253 (44%), Gaps = 20/253 (7%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIGSSSSSASGCS 67
           RL G+ ALITG ++GIG   AR F   GA VLI A   D L ++  +D  +         
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQA--RDELAEEFPEREVH 63

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
            +  DV+ ++D    ++     +  L I+ NNAG    ++   +D  + E+  I   NL 
Sbjct: 64  GLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGG--NIRKAAIDYTEDEWRGIFETNLF 121

Query: 128 GAF-LGRN--------------MLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            AF L R                +  V G+    +   Y  +K  LL + +N AVE    
Sbjct: 122 SAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAED 181

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV 232
           GIRVN V+P+ + TPL    L   D     +       V EPE+ A A  +L    +  +
Sbjct: 182 GIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYI 241

Query: 233 SGHNLVVDGGFAI 245
           +G  + VDGGF  
Sbjct: 242 TGQCIAVDGGFLR 254

Length = 257

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  117 bits (294), Expect = 6e-32
 Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 24/255 (9%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+ K A++TGG  GIG  T R F++ GAKV + D+  +  E V  DI +   +A      
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQA---F 57

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
            CD+T    ++ AV  A    G +D++ NNAG  D+  P     +   +ER+++INL GA
Sbjct: 58  ACDITDRDSVDTAVAAAEQALGPVDVLVNNAGW-DKFGP-FTKTEPPLWERLIAINLTGA 115

Query: 130 -FLGRNMLLGV--------------CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
             +   +L G+                 +G +    Y + K GL+   K  A E  R GI
Sbjct: 116 LHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGI 175

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK----GAVLEPEDAAEAALYLGSDESK 230
            VN V P    T L  D    A++      +  +    G + +P+D   A L+  SD++ 
Sbjct: 176 TVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDAS 235

Query: 231 CVSGHNLVVDGGFAI 245
            ++G  L V GG  +
Sbjct: 236 FITGQVLSVSGGLTM 250

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  117 bits (295), Expect = 6e-32
 Identities = 75/256 (29%), Positives = 118/256 (46%), Gaps = 35/256 (13%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
           G VA++TGGA G+G  T       GAKV+I D+ +  GE+V K           C +V  
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAKLG-------DNCRFVPV 54

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQA----EFERILSINLV 127
           DVT EKD++ A+  A  ++G+LDI+ N AG     K       Q      F+R++++NL+
Sbjct: 55  DVTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLI 114

Query: 128 GAF---------LGRNMLL--GVCGII----------GGAATHAYTSSKHGLLGLMKNTA 166
           G F         +G+N     G  G+I          G     AY++SK G++G+    A
Sbjct: 115 GTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIA 174

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS 226
            +L   GIRV  ++P    TPL     +   D L          + +P + A    ++  
Sbjct: 175 RDLAPQGIRVVTIAPGLFDTPLLAGLPEKVRDFLAKQVPFP-SRLGDPAEYAHLVQHII- 232

Query: 227 DESKCVSGHNLVVDGG 242
            E+  ++G  + +DG 
Sbjct: 233 -ENPYLNGEVIRLDGA 247

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  117 bits (294), Expect = 6e-32
 Identities = 86/254 (33%), Positives = 117/254 (46%), Gaps = 40/254 (15%)

Query: 14  VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDV 73
           VA++TGGA GIG+  A   +K GA V+IAD+K +  E+V   I  +   A G     C+V
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLE---CNV 57

Query: 74  TKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGR 133
           T E+D+E  V   V+Q+G + I+ NNAG     KP  +   + +FE    +NL  AF   
Sbjct: 58  TSEQDLEAVVKATVSQFGGITILVNNAGG-GGPKPFDMPMTEEDFEWAFKLNLFSAFRLS 116

Query: 134 NMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNC 178
            +                  +          AY SSK  +  + +N A +LG  GIRVN 
Sbjct: 117 QLCAPHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNA 176

Query: 179 VSPYAVSTPLAKDFLKLADDGLGGMYS----------NLKGAVLEPEDAAEAALYLGSDE 228
           V+P AV T           D L  + +             G + EPED A AAL+L S  
Sbjct: 177 VAPGAVKT-----------DALASVLTPEIERAMLKHTPLGRLGEPEDIANAALFLCSPA 225

Query: 229 SKCVSGHNLVVDGG 242
           S  VSG  L V GG
Sbjct: 226 SAWVSGQVLTVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  116 bits (292), Expect = 1e-31
 Identities = 75/245 (30%), Positives = 117/245 (47%), Gaps = 24/245 (9%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
           GKVA++TGG  GIG+     F + G KV+ ADI ++ G    +  G +        +VH 
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNL------FFVHG 54

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           DV  E  ++  V   + + G++D++ NNA      K  +      E++RILS+NL G + 
Sbjct: 55  DVADETLVKFVVYAMLEKLGRIDVLVNNAARGS--KGILSSLLLEEWDRILSVNLTGPYE 112

Query: 132 -----GRNMLLGVCGIIGGAATHA---------YTSSKHGLLGLMKNTAVELGRFGIRVN 177
                   ++     II  A+T A         Y +SK GL+ L    A+ LG   IRVN
Sbjct: 113 LSRYCRDELIKNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVN 171

Query: 178 CVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNL 237
           C+SP  ++T   ++F   A         +  G V  P+D A   L+L   ++  ++G   
Sbjct: 172 CISPGWINTTEQQEF-TAAPLTQEDHAQHPAGRVGTPKDIANLVLFLCQQDAGFITGETF 230

Query: 238 VVDGG 242
           +VDGG
Sbjct: 231 IVDGG 235

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  116 bits (291), Expect = 2e-31
 Identities = 75/263 (28%), Positives = 115/263 (43%), Gaps = 43/263 (16%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L GK ALITG ARGIG   A+ + + GA+V IADI  +   +   +IG ++ + S     
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAIS----- 55

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             DVT +  I+  V   V ++G +DI+ NNA   D + P I+D  +  ++R+ +IN+ G 
Sbjct: 56  -LDVTDQASIDRCVAALVDRWGSIDILVNNAALFD-LAP-IVDITRESYDRLFAINVSGT 112

Query: 130 FL-----GRNMLLGVCG--II---------GGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
                   R M+    G  II         G A    Y ++K  ++ L ++  + L R G
Sbjct: 113 LFMMQAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHG 172

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--------------GAVLEPEDAAE 219
           I VN ++P  V             D     Y N                G +   ED   
Sbjct: 173 INVNAIAPGVVDGEHWDGV-----DAKFARYENRPRGEKKRLVGEAVPFGRMGRAEDLTG 227

Query: 220 AALYLGSDESKCVSGHNLVVDGG 242
            A++L S ++  +      VDGG
Sbjct: 228 MAIFLASTDADYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  114 bits (288), Expect = 5e-31
 Identities = 76/256 (29%), Positives = 116/256 (45%), Gaps = 31/256 (12%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADI----KDDLGESVCKDIGSSSSSASG 65
           L  +  LITGG+ G+G   A   +  GA V++ DI         ++V   I ++   A G
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSI 124
              +  DV        A++  V ++G+LDI+ NNAG   D     +      E++ ++ +
Sbjct: 64  ---LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSI---EEWDDVIDV 117

Query: 125 NLVGAF-----LGRNMLLG-----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
           NL G F         M+             V G+ G      Y +SK GL+GL K  A E
Sbjct: 118 NLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANE 177

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE 228
           L   GI VN V+P A++TP+A +     +  L  +     G   EP++ A    +L SD 
Sbjct: 178 LAPRGITVNAVAPGAINTPMADN-AAPTEHLLNPVPVQRLG---EPDEVAALVAFLVSDA 233

Query: 229 SKCVSGHNLVVDGGFA 244
           +  V+G  + VDGGF 
Sbjct: 234 ASYVTGQVIPVDGGFC 249

Length = 249

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  114 bits (288), Expect = 6e-31
 Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 45/264 (17%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
             L+ KVA++TGG++GIG+       + G+ V+  DIK+               S +   
Sbjct: 2   LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKE--------------PSYNDVD 47

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
           Y   DV+ ++ +   ++  +++YG++DI+ NNAG   E    I   ++ E++RI+++N+ 
Sbjct: 48  YFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGI--ESYGAIHAVEEDEWDRIINVNVN 105

Query: 128 GAFL------------GRNMLLGVCGIIGGAATH---AYTSSKHGLLGLMKNTAVELGRF 172
           G FL             + +++ +  +   A T    AY +SKH +LGL ++ AV+    
Sbjct: 106 GIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT 165

Query: 173 GIRVNCVSPYAVSTPL---------AKDFLKLADDGL--GGMYSNLKGAVLEPEDAAEAA 221
            IR   V P ++ TPL          KD   +       G M+      V +PE+ A   
Sbjct: 166 -IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHP--MKRVGKPEEVAYVV 222

Query: 222 LYLGSDESKCVSGHNLVVDGGFAI 245
            +L SD +  ++G  + VDGG   
Sbjct: 223 AFLASDLASFITGECVTVDGGLRA 246

Length = 258

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  113 bits (286), Expect = 1e-30
 Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 38/260 (14%)

Query: 11  QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVH 70
           + K+ LITG A  IG+   +     GA++++ADI     E + +++ +   +      + 
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIA--LE 58

Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGA 129
            D+T ++ I+  + + + ++G++DI+ NNA  +         +    ++  +L++NL GA
Sbjct: 59  LDITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGA 118

Query: 130 FL------------GRNMLLGVCGIIGGAA--------THAYTS-----SKHGLLGLMKN 164
           FL            G+  ++ +  I G  A        T  Y+       K G++ L K 
Sbjct: 119 FLCSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKY 178

Query: 165 TAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDAAEAAL 222
            A      GIRVN +SP  +      +FL+         Y+       +L PED   A +
Sbjct: 179 LAKYYADTGIRVNAISPGGILNNQPSEFLE--------KYTKKCPLKRMLNPEDLRGAII 230

Query: 223 YLGSDESKCVSGHNLVVDGG 242
           +L SD S  V+G NLV+DGG
Sbjct: 231 FLLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  114 bits (286), Expect = 1e-30
 Identities = 73/249 (29%), Positives = 111/249 (44%), Gaps = 24/249 (9%)

Query: 15  ALITGGARGIGECTARLFSKHGAKVLIADIKDDLG-ESVCKDIGSSSSSASGCSYVHCDV 73
           A ITG A G+G   AR  ++ GAKV + DI D  G ++   +I ++       + V  DV
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQ-DV 60

Query: 74  TKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGR 133
           T E   +  +  A    G L ++ NNAG        I   +  E+ R+++IN+   FLG 
Sbjct: 61  TDEAQWQALLAQAADAMGGLSVLVNNAGV--GSFGAIEQIELDEWRRVMAINVESIFLGC 118

Query: 134 NMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNC 178
              L                V          AY +SK  +  L K+ A++  R G+ V C
Sbjct: 119 KHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRC 178

Query: 179 --VSPYAVSTPLAKDFLKLAD--DGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKCVS 233
             + P  + T +     +     +    +   +  G + EP+D A A LYL SDES+ V+
Sbjct: 179 NSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVT 238

Query: 234 GHNLVVDGG 242
           G  LV+DGG
Sbjct: 239 GAELVIDGG 247

Length = 251

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  113 bits (284), Expect = 2e-30
 Identities = 81/254 (31%), Positives = 125/254 (49%), Gaps = 29/254 (11%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L GKVA++TGG  G+G+  A   +K GA ++I     +  E+  + I       +   +
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETR-RLIEKEGRKVT---F 67

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  D+TK +  E  V  A+ ++GK+DI+ NNAGT+      +L+    ++  ++ INL  
Sbjct: 68  VQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAP--LLEYKDEDWNAVMDINLNS 125

Query: 129 AFL-----GRNMLLGVCGII----------GGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            +       + M     G I          GG    AYT+SKHG+ GL K  A EL  + 
Sbjct: 126 VYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYN 185

Query: 174 IRVNCVSPYAVST----PLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES 229
           I+VN ++P  + T    P+  D     D+ L  + +   G   EP+D   AA++L S  S
Sbjct: 186 IQVNAIAPGYIKTANTAPIRAD-KNRNDEILKRIPAGRWG---EPDDLMGAAVFLASRAS 241

Query: 230 KCVSGHNLVVDGGF 243
             V+GH L VDGG+
Sbjct: 242 DYVNGHILAVDGGW 255

Length = 258

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  112 bits (283), Expect = 3e-30
 Identities = 80/260 (30%), Positives = 120/260 (46%), Gaps = 40/260 (15%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
           GKVAL+TGGA GIG   A+  +  GA V++ADI  ++ E V +       +      V C
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALG----VQC 56

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           DVT E  +++A   AV ++G LDI+ +NAG +    P I +    ++ R + INL G FL
Sbjct: 57  DVTSEAQVQSAFEQAVLEFGGLDIVVSNAG-IATSSP-IAETSLEDWNRSMDINLTGHFL 114

Query: 132 --------------GRNMLLGVC--GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
                         G N++       +  G    AY+++K     L +  A+E G  GIR
Sbjct: 115 VSREAFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIR 174

Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE-------------PEDAAEAAL 222
           VN V+P AV         K+ +       +   G + E             PED AEA +
Sbjct: 175 VNTVNPDAV-----FRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLKREVLPEDVAEAVV 229

Query: 223 YLGSDESKCVSGHNLVVDGG 242
            + S++    +G  + VDGG
Sbjct: 230 AMASEDFGKTTGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  116 bits (293), Expect = 5e-30
 Identities = 82/256 (32%), Positives = 124/256 (48%), Gaps = 28/256 (10%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
            +V  ITGGARGIG   A  F+  G ++LI D   +  + + + +G    S      V  
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLS------VQA 322

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF- 130
           D+T E  +E+A      ++G+LD++ NNAG  +  KP+ L+    +F R+  +NL GAF 
Sbjct: 323 DITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPS-LEQSAEDFTRVYDVNLSGAFA 381

Query: 131 ----LGRNM--------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNC 178
                 R M        L  +  ++     +AY +SK  +  L ++ A E    GIRVN 
Sbjct: 382 CARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNT 441

Query: 179 VSPYAVSTPLAKDFLKLADDGLGGMYSNLK----GAVLEPEDAAEAALYLGSDESKCVSG 234
           V+P  + TP     L L   G     S  +    G + +PE+ AEA  +L S  +  V+G
Sbjct: 442 VAPGYIETPAV---LALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNG 498

Query: 235 HNLVVDGGF-AIVNAG 249
             L VDGG+ A  +AG
Sbjct: 499 ATLTVDGGWTAFGDAG 514

Length = 520

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  112 bits (283), Expect = 6e-30
 Identities = 72/232 (31%), Positives = 98/232 (42%), Gaps = 43/232 (18%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
             L+GKV  ITGGARGIG  TAR  +  GA+V I D+ + L +    ++G          
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-------LVV 53

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPN--ILDNDQAEFERILSIN 125
               DVT        ++      G +D++ NNAG    V P    LD   A   RIL +N
Sbjct: 54  GGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAG----VMPVGPFLDEPDAVTRRILDVN 109

Query: 126 LVGAFLG-----RNML-------LGVCGIIG-----GAATHAYTSSKHGLLGLMKNTAVE 168
           + G  LG       M+       + V  + G     G AT  Y +SKH ++G      +E
Sbjct: 110 VYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMAT--YCASKHAVVGFTDAARLE 167

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEA 220
           L   G+ V+ V P  V+T L          G  G         +EPED A A
Sbjct: 168 LRGTGVHVSVVLPSFVNTELIA-----GTGGAKGF------KNVEPEDVAAA 208

Length = 273

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  111 bits (280), Expect = 7e-30
 Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 44/231 (19%)

Query: 14  VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDV 73
           + LITGG  GIG   A  F+K GAKV+I DI +   E    ++  +        Y  CDV
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGK---VHYYKCDV 57

Query: 74  TKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG----- 128
           +K +++  A      + G + I+ NNAG V      +L+    E E+   +N +      
Sbjct: 58  SKREEVYEAAKKIKKEVGDVTILINNAGVVS--GKKLLELPDEEIEKTFEVNTLAHFWTT 115

Query: 129 -AFLGRNM---------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVEL---GRFGIR 175
            AFL   +         +  V G+I  A    Y +SK   +G  ++  +EL   G+ GI+
Sbjct: 116 KAFLPDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIK 175

Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK------GAVLEPEDAAEA 220
              V PY ++T               GM+  +K        +LEPE  AE 
Sbjct: 176 TTLVCPYFINT---------------GMFQGVKTPRPLLAPILEPEYVAEK 211

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score =  111 bits (280), Expect = 8e-30
 Identities = 77/258 (29%), Positives = 109/258 (42%), Gaps = 48/258 (18%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           + AL+TG A GIG+  AR F   G +VL  DI      +    +G +         V CD
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVP-----VACD 57

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL- 131
           +T    +  A+  A  + G +D++  NAG       ++ D   A +    ++NL  A+L 
Sbjct: 58  LTDAASLAAALANAAAERGPVDVLVANAGAARAA--SLHDTTPASWRADNALNLEAAYLC 115

Query: 132 ----GRNMLL---GVCGIIGG-----AATH-AYTSSKHGLLGLMKNTAVELGRFGIRVNC 178
                  ML    G    IG      A  H AY+++K GL+   K  AVE GRFGIR N 
Sbjct: 116 VEAVLEGMLKRSRGAVVNIGSVNGMAALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANA 175

Query: 179 VSPYAVSTPL--------------AKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL 224
           V+P  V T                 K +  L D                P+D A A L+L
Sbjct: 176 VAPGTVKTQAWEARVAANPQVFEELKKWYPLQD-------------FATPDDVANAVLFL 222

Query: 225 GSDESKCVSGHNLVVDGG 242
            S  ++ ++G  L VDGG
Sbjct: 223 ASPAARAITGVCLPVDGG 240

Length = 257

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  111 bits (279), Expect = 9e-30
 Identities = 73/247 (29%), Positives = 112/247 (45%), Gaps = 21/247 (8%)

Query: 15  ALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDV 73
           AL+TGG+RGIG+  A   ++ GA V+I   K  D    V  +I      A     V  DV
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKA---VVVRADV 57

Query: 74  TKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGR 133
           ++ +D+E        ++G+LD++ +NA      +P + +   A ++  ++ NL       
Sbjct: 58  SQPQDVEEMFAAVKERFGRLDVLVSNAAA-GAFRP-LSELTPAHWDAKMNTNLKALVHCA 115

Query: 134 NMLLGVCGIIGGAATHAYTS---------------SKHGLLGLMKNTAVELGRFGIRVNC 178
                +    GG    A +S               +K  L  L++  AVELG  GIRVN 
Sbjct: 116 QQAAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNA 175

Query: 179 VSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLV 238
           VSP  + T     F    D       +   G V  P+D A+A  +L SD ++ ++G  LV
Sbjct: 176 VSPGVIDTDALAHFPNREDLLEAAAANTPAGRVGTPQDVADAVGFLCSDAARMITGQTLV 235

Query: 239 VDGGFAI 245
           VDGG +I
Sbjct: 236 VDGGLSI 242

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  111 bits (280), Expect = 1e-29
 Identities = 78/260 (30%), Positives = 119/260 (45%), Gaps = 37/260 (14%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L GK+AL+TG +RGIGE  A+L ++ GA V+++  K D  ++V   I ++   A     +
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEA---L 62

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKP---NILDNDQAEFERILSINL 126
            C + + + I+        ++G+LDI+ NNA       P   +ILD D   F++ + +N+
Sbjct: 63  ACHIGEMEQIDALFAHIRERHGRLDILVNNAAA----NPYFGHILDTDLGAFQKTVDVNI 118

Query: 127 VGAFL-----GRNM----------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
            G F      G+ M          +  V G+  G     Y+ +K  ++ + K  A E   
Sbjct: 119 RGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAP 178

Query: 172 FGIRVNCVSPYAVSTPLA------KDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG 225
           FGIRVN + P    T  A         LK A      +         EP + A A LYL 
Sbjct: 179 FGIRVNALLPGLTDTKFASALFKNDAILKQA------LAHIPLRRHAEPSEMAGAVLYLA 232

Query: 226 SDESKCVSGHNLVVDGGFAI 245
           SD S   +G  L VDGG+  
Sbjct: 233 SDASSYTTGECLNVDGGYLS 252

Length = 252

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  111 bits (279), Expect = 2e-29
 Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 26/257 (10%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M   L+ KV ++TGGA GIG   +   ++ GA  +I   +    +   +++ +    A  
Sbjct: 1   MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFG-RSAPDDEFAEELRALQPRAE- 58

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             +V  D+T +    +AV   V ++G++D + NNAG  D V    L+  +  F   L  N
Sbjct: 59  --FVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVG---LEAGREAFVASLERN 113

Query: 126 LVGAFL-----------GRNMLLGV---CGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           L+  ++            R  ++ +     + G   T  Y ++K   L L +  AV L +
Sbjct: 114 LIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAK 173

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE-----PEDAAEAALYLGS 226
            G+RVN V P  V TPL ++++   DD    + +      L       E+ A+ A++L S
Sbjct: 174 DGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLS 233

Query: 227 DESKCVSGHNLVVDGGF 243
           + S   +G  L VDGG+
Sbjct: 234 ERSSHTTGQWLFVDGGY 250

Length = 258

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  110 bits (277), Expect = 3e-29
 Identities = 76/264 (28%), Positives = 121/264 (45%), Gaps = 35/264 (13%)

Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGC 66
           L  L GK AL+TGG+RG+G   A    + GA+V+++  K +  E     + +    A   
Sbjct: 7   LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDA--- 63

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
            ++  DV  E DIE      + ++G +DI+ NNAG          D+    +++++++N+
Sbjct: 64  LWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPA--EDHPVEAWDKVMNLNV 121

Query: 127 VGAFL-----GRNMLLG-----------VCGIIGGA----ATHAYTSSKHGLLGLMKNTA 166
            G FL      +  ++            V G+ G       T AY +SK  ++   +  A
Sbjct: 122 RGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALA 181

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----EPEDAAEAAL 222
            E G  GIRVN ++P    T + +  L+   + L      L    L    + ED   AAL
Sbjct: 182 AEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDL------LAHTPLGRLGDDEDLKGAAL 235

Query: 223 YLGSDESKCVSGHNLVVDGGFAIV 246
            L SD SK ++G  L VDGG + V
Sbjct: 236 LLASDASKHITGQILAVDGGVSAV 259

Length = 259

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  110 bits (276), Expect = 5e-29
 Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 36/269 (13%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGC 66
            RL GKVAL+TGG +G+G   AR F++ GA  ++I     + GE+   ++    +  +  
Sbjct: 2   GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAEL---EALGAKA 58

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
            +V  D++  +D    V  A   +G+LD + N AG  D  +  ILD     F+R  ++N+
Sbjct: 59  VFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTD--RGTILDTSPELFDRHFAVNV 116

Query: 127 VGAF-----LGRNMLL-GVCGII---GGAATH-------AYTSSKHGLLGLMKNTAVELG 170
              F       + M      G I   G  + H       AY +SK  L  L +N A  L 
Sbjct: 117 RAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALL 176

Query: 171 RFGIRVNCVSPYAVSTP----LAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLG 225
           R  IRVN ++   ++T     + ++F    DD L    +    G +L+P++ A A  +L 
Sbjct: 177 RNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLL 236

Query: 226 SDESKCVSGHNLVVDGGFAIVNAGFSVFG 254
           SDES  ++G         ++++   SV+G
Sbjct: 237 SDESGLMTG---------SVIDFDQSVWG 256

Length = 260

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  109 bits (273), Expect = 7e-29
 Identities = 72/230 (31%), Positives = 114/230 (49%), Gaps = 31/230 (13%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKV-LIADIKDDLGESVCKDIGSSSSSAS 64
           M + LQGK ALITG  RGIG   A   +K G  V L+A  +++L ++V +++ +      
Sbjct: 1   MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENL-KAVAEEVEAYGVKVV 59

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
                  DV+  +++  A+     + G +DI+ NNAG         L+ D AE+E+I+ +
Sbjct: 60  ---IATADVSDYEEVTAAIEQLKNELGSIDILINNAGISK--FGKFLELDPAEWEKIIQV 114

Query: 125 NLVGAF----------LGRN-----MLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           NL+G +          + R       +    G  G A T AY++SK G+LGL ++   E+
Sbjct: 115 NLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEV 174

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAE 219
            +  IRV  ++P  V+T +A D L L D             V++PED AE
Sbjct: 175 RKHNIRVTALTPSTVATDMAVD-LGLTDGN--------PDKVMQPEDLAE 215

Length = 239

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  108 bits (272), Expect = 1e-28
 Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 45/259 (17%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHC 71
           +V L+TG +RG+G   AR F++ GA+V++   +  +  E+V  + G  + +         
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQA------ 54

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEV-------KPNILD----NDQAEFER 120
           DV     ++  +  A   +G +D + NNA  +D           + +D      Q E   
Sbjct: 55  DVRDRDQVQAMIEEAKNHFGPVDTIVNNA-LIDFPFDPDQRKTFDTIDWEDYQQQLEGAV 113

Query: 121 ILSINLVGAFLGRNMLLGVCGIIGGAAT---------HAYTSSKHGLLGLMKNTAVELGR 171
             ++NL+ A L      G   +I              H YT++K  LLG  +N A ELG 
Sbjct: 114 KGALNLLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGP 173

Query: 172 FGIRVNCVSP--------YAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
           +GI VN VS          A +     D +               G V  P+D A+A L+
Sbjct: 174 YGITVNMVSGGLLKVTDASAATPKEVFDAIAQTTP---------LGKVTTPQDIADAVLF 224

Query: 224 LGSDESKCVSGHNLVVDGG 242
             S  ++ V+G NLVVDGG
Sbjct: 225 FASPWARAVTGQNLVVDGG 243

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  109 bits (273), Expect = 1e-28
 Identities = 78/259 (30%), Positives = 125/259 (48%), Gaps = 35/259 (13%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
              R +GKVALITGG RGIG   A  F + GAKV +     +      ++ G  +     
Sbjct: 1   YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFT----- 55

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              + CDV     ++ +      ++G++D++ NNAG +  + P   + D+ ++ +++ IN
Sbjct: 56  ---IKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAG-IMYLMP-FEEFDEEKYNKMIKIN 110

Query: 126 LVGA------FL--------GRNMLLGVCGIIGGAA--THAYTSSKHGLLGLMKNTAVEL 169
           L GA      FL        G  + +     IG AA  T  Y  +K G++ L +  A EL
Sbjct: 111 LNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFEL 170

Query: 170 GRFGIRVNCVSPYAVSTPLA------KDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
           G++GIRVN V+P  V T +       ++  KL +           G   +PED A   L+
Sbjct: 171 GKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTG---KPEDIANIVLF 227

Query: 224 LGSDESKCVSGHNLVVDGG 242
           L SD+++ ++G  +V DGG
Sbjct: 228 LASDDARYITGQVIVADGG 246

Length = 255

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  107 bits (269), Expect = 4e-28
 Identities = 76/263 (28%), Positives = 118/263 (44%), Gaps = 44/263 (16%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIGSSSSSASGCSY 68
           L G+VAL+TG ARG+G   AR  +  GA VL+       L  +V   + ++  +A   ++
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAV-AALRAAGGAAEALAF 67

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              D+  E+ +  A      ++G+LDI+ NN G  D  +  + + D A    +L  +LV 
Sbjct: 68  ---DIADEEAVAAAFARIDAEHGRLDILVNNVGARD--RRPLAELDDAAIRALLETDLVA 122

Query: 129 AFL--------------GRNMLLGVCGIIGG---AATHAYTSSKHGLLGLMKNTAVELGR 171
             L              GR  ++ +  I G    A    Y ++K GL GLM+  A E G 
Sbjct: 123 PILLSRLAAQRMKRQGYGR--IIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGP 180

Query: 172 FGIRVNCVSP--YAVST-------PLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL 222
            GI  N ++P  +A  T       P    +L               G    PE+ A AA+
Sbjct: 181 HGITSNAIAPGYFATETNAAMAADPAVGPWLAQ---------RTPLGRWGRPEEIAGAAV 231

Query: 223 YLGSDESKCVSGHNLVVDGGFAI 245
           +L S  +  V+GH L VDGG+++
Sbjct: 232 FLASPAASYVNGHVLAVDGGYSV 254

Length = 256

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  106 bits (266), Expect = 7e-28
 Identities = 72/243 (29%), Positives = 105/243 (43%), Gaps = 59/243 (24%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+GKVALITGG++GIG   A      G KV I        E    ++ +  +       +
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLG----L 59

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERILSI 124
             DV  E D++ AV+  V  +G LD++  NAG      V+E+ P        E+  ++  
Sbjct: 60  AADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPE-------EWRLVIDT 112

Query: 125 NLVGAF---------LGRN--------MLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
           NL GAF         L R          L G     GGA   AY +SK GL+G  +   +
Sbjct: 113 NLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGA---AYNASKFGLVGFSEAAML 169

Query: 168 ELGRFGIRVNCVSPYAVST------PLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAA 221
           +L ++GI+V+ + P +V+T      P  KD  K+                  PED A+  
Sbjct: 170 DLRQYGIKVSTIMPGSVATHFNGHTPSEKDAWKIQ-----------------PEDIAQLV 212

Query: 222 LYL 224
           L L
Sbjct: 213 LDL 215

Length = 237

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  111 bits (278), Expect = 9e-28
 Identities = 78/264 (29%), Positives = 117/264 (44%), Gaps = 33/264 (12%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L  +VA +TGGA GIG  TAR  +  GA V++AD+  +  E+V  +I     +    + +
Sbjct: 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVA-L 470

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             DVT E+ ++ A       YG +DI+ NNAG          +    E++  L I   G 
Sbjct: 471 KMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIA--TSSPFEETTLQEWQLNLDILATGY 528

Query: 130 FL--------------GRNMLL--GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
           FL              G N++       +  G    AY+++K     L +  A E G +G
Sbjct: 529 FLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYG 588

Query: 174 IRVNCVSPYAV---STPLAKDFL-------KLADDGLGGMY---SNLKGAVLEPEDAAEA 220
           IRVN V+P AV   S     ++         +  D L   Y   + LK  +  P D AEA
Sbjct: 589 IRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIF-PADIAEA 647

Query: 221 ALYLGSDESKCVSGHNLVVDGGFA 244
             +L S +S+  +G  + VDGG  
Sbjct: 648 VFFLASSKSEKTTGCIITVDGGVP 671

Length = 676

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  106 bits (266), Expect = 1e-27
 Identities = 74/255 (29%), Positives = 109/255 (42%), Gaps = 42/255 (16%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L G+V L+TGG RGIG   AR F   GA V+           VC      +       + 
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVV-----------VCGRRAPETVDGRPAEFH 52

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERILSI 124
             DV     +   V+  V ++G+LD++ NNAG        E  P          E+I+ +
Sbjct: 53  AADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRF-------HEKIVEL 105

Query: 125 NLVGAFL-------------GRNMLLGVCGIIGGAA---THAYTSSKHGLLGLMKNTAVE 168
           NL+   L             G   ++ +  + G      T AY ++K GLL L ++ AVE
Sbjct: 106 NLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVE 165

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSD 227
                +RVN V    V T  ++       +G+  + + +  G +  P D A A L+L SD
Sbjct: 166 WAP-KVRVNAVVVGLVRTEQSELHYG-DAEGIAAVAATVPLGRLATPADIAWACLFLASD 223

Query: 228 ESKCVSGHNLVVDGG 242
            +  VSG NL V GG
Sbjct: 224 LASYVSGANLEVHGG 238

Length = 252

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 3e-27
 Identities = 70/254 (27%), Positives = 105/254 (41%), Gaps = 30/254 (11%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
              GK  L+TG + GIG   A   ++ GA+V+ A       + +  + G        C  
Sbjct: 6   DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETG--------CEP 57

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  DV  +     A+  A+   G  D + N AG         LD     F+R++++N  G
Sbjct: 58  LRLDVGDDA----AIRAALAAAGAFDGLVNCAGIASLESA--LDMTAEGFDRVMAVNARG 111

Query: 129 AFLG-----RNMLLG-----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           A L      R M+                ++G     AY +SK  L  + +   VELG  
Sbjct: 112 AALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPH 171

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV 232
           GIRVN V+P    TP+A +           + +   G   E +D A   L+L SD +  V
Sbjct: 172 GIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMV 231

Query: 233 SGHNLVVDGGFAIV 246
           SG +L VDGG+   
Sbjct: 232 SGVSLPVDGGYTAR 245

Length = 245

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  104 bits (261), Expect = 9e-27
 Identities = 81/272 (29%), Positives = 126/272 (46%), Gaps = 44/272 (16%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+ KVA+ITGG   +G   AR  ++ GAKV       + G+ V K+I +    A     +
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIA---L 59

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG------TVD------EVKPNILDNDQAE 117
             DV     +E A    V Q+G +DI+ N AG      T D      E + N  D D+  
Sbjct: 60  AADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEG 119

Query: 118 FERILSINLVGAFL-----GRNMLLGVCG-IIGGAATHAYTS---------SKHGLLGLM 162
           +E +  +NL G+FL     G++ML    G II  ++ +A++          +K  +    
Sbjct: 120 WEFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFT 179

Query: 163 KNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------E 213
           +  AVE    G+RVN ++P    TP  +  L   D    G Y++    +L         +
Sbjct: 180 QWLAVEFATTGVRVNAIAPGFFVTPQNRKLLINPD----GSYTDRSNKILGRTPMGRFGK 235

Query: 214 PEDAAEAALYLGSDE-SKCVSGHNLVVDGGFA 244
           PE+   A L+L S++ S  V+G  + VDGGF+
Sbjct: 236 PEELLGALLFLASEKASSFVTGVVIPVDGGFS 267

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  102 bits (257), Expect = 2e-26
 Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 27/232 (11%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L+GKVALITG + GIGE TAR  ++ GAKV++A  +++  E++  +IG+ +        
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGA-----ALA 57

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  DVT    +E A+     ++G++DI+ NNAG +    P + + D  +++R++  N+ G
Sbjct: 58  LALDVTDRAAVEAAIEALPEEFGRIDILVNNAG-LALGDP-LDEADLDDWDRMIDTNVKG 115

Query: 129 AFLG-----RNMLLGVCGII---GGAATH-------AYTSSKHGLLGLMKNTAVELGRFG 173
              G       M+    G I   G  A          Y ++K  +         EL   G
Sbjct: 116 LLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTG 175

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--GAVLEPEDAAEAALY 223
           IRV  +SP  V T           +G       +   G  L PED AEA L+
Sbjct: 176 IRVTVISPGLVETTEFSTV---RFEGDDERADKVYKGGTALTPEDIAEAVLF 224

Length = 246

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  103 bits (258), Expect = 2e-26
 Identities = 72/261 (27%), Positives = 111/261 (42%), Gaps = 40/261 (15%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
            KVAL+TG  +GIG   A+   + G KV I D  ++  ++    +      A     V  
Sbjct: 2   SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIA---VKA 58

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGT-----VDEVKPNILDNDQAEFERILSINL 126
           DV+    +  AV   V  +G L+++ NNAG      ++ +           F+++ +IN+
Sbjct: 59  DVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQ-------FDKVYNINV 111

Query: 127 VGAFLGRNML------LGVCGIIGGAATHA----------YTSSKHGLLGLMKNTAVELG 170
            G   G          LG  G I  A + A          Y+S+K  + GL +  A +L 
Sbjct: 112 GGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLA 171

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLG-----GMYSNLK----GAVLEPEDAAEAA 221
             GI VN  +P  V TP+  D      +  G     GM    K    G + EPED A   
Sbjct: 172 SEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCV 231

Query: 222 LYLGSDESKCVSGHNLVVDGG 242
            +L   +S  ++G  ++VDGG
Sbjct: 232 SFLAGPDSDYITGQTIIVDGG 252

Length = 256

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  102 bits (257), Expect = 2e-26
 Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 24/256 (9%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG-ESVCKDIGSSSSSASGCSYVHC 71
           +VA++T    GIG+  A L ++ G  + I    D+ G +   +++ S    A        
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAE---IRQL 59

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           D++   +   A++  + + G++D++ NNAG +   K   LD D  E+ +I ++++ GAFL
Sbjct: 60  DLSDLPEGAQALDKLIQRLGRIDVLVNNAGAM--TKAPFLDMDFDEWRKIFTVDVDGAFL 117

Query: 132 -----GRNMLLGVCG--IIGGAATH---------AYTSSKHGLLGLMKNTAVELGRFGIR 175
                 R+M+    G  II   + H         AYT++KH L GL K  A+EL   GI 
Sbjct: 118 CSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGIL 177

Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGH 235
           VN V+P A++TP+    +  +D           G   +  + A    +L S+ +   +G 
Sbjct: 178 VNAVAPGAIATPMNG--MDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQ 235

Query: 236 NLVVDGGFAIVNAGFS 251
           +L+VDGGF + N  F+
Sbjct: 236 SLIVDGGFMLANPQFN 251

Length = 256

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  102 bits (257), Expect = 2e-26
 Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 41/261 (15%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
           GKVAL+T  + GIG   AR  ++ GA+V I     +  E    ++    +  +G   V  
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELR---AGGAGVLAVVA 57

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERILS--I 124
           D+T  +DI+  V  A   +G++DI+ NNAG        E+     ++    F+  L   I
Sbjct: 58  DLTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTD---EDWLEAFDLKLLSVI 114

Query: 125 NLVGAFL--------GRNMLLGVCGIIGGAA----THAYTSS--KHGLLGLMKNTAVELG 170
            +V A L        GR     +  I          +   S+  + GL+GL+K  + EL 
Sbjct: 115 RIVRAVLPGMKERGWGR-----IVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELA 169

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAAEAA 221
             G+ VN V P  + T   +  L+   +  G      +  V          +PE+ A   
Sbjct: 170 PDGVTVNSVLPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALI 229

Query: 222 LYLGSDESKCVSGHNLVVDGG 242
            +L S+++  ++G  ++VDGG
Sbjct: 230 AFLASEKASYITGQAILVDGG 250

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  102 bits (256), Expect = 3e-26
 Identities = 79/255 (30%), Positives = 119/255 (46%), Gaps = 23/255 (9%)

Query: 6   MLRR--LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSA 63
           + RR  L  KVAL+T    GIG   AR  ++ GA V+++  K    +     +     S 
Sbjct: 2   VTRRDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSV 61

Query: 64  SGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILS 123
           +G     C V K +D E  V TAV  +G +DI+ +NA  V+    NILD+ +  +++IL 
Sbjct: 62  TGTV---CHVGKAEDRERLVATAVNLHGGVDILVSNA-AVNPFFGNILDSTEEVWDKILD 117

Query: 124 INLVGAFLGRNMLL--------GVCGIIGGAATHA-------YTSSKHGLLGLMKNTAVE 168
           +N+    L    ++        G   I+   A          Y  SK  LLGL KN A E
Sbjct: 118 VNVKATALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPE 177

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSD 227
           L    IRVNC++P  + T  +   L +       M   L+   L +PED A    +L S+
Sbjct: 178 LAPRNIRVNCLAPGLIKTSFSS-ALWMDKAVEESMKETLRIRRLGQPEDCAGIVSFLCSE 236

Query: 228 ESKCVSGHNLVVDGG 242
           ++  ++G  +VV GG
Sbjct: 237 DASYITGETVVVGGG 251

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  101 bits (253), Expect = 7e-26
 Identities = 58/226 (25%), Positives = 92/226 (40%), Gaps = 26/226 (11%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVL-IADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
           KV LITG + GIG   A   +  G +V+  A   D L                    +  
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLG-------ELLNDNLEVLEL 53

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG--- 128
           DVT E+ I+ AV   + ++G++D++ NNAG      P + +    E   +  +N+ G   
Sbjct: 54  DVTDEESIKAAVKEVIERFGRIDVLVNNAG-YGLFGP-LEETSIEEVRELFEVNVFGPLR 111

Query: 129 ---AFL--------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV 176
              AFL        GR + +  V G++       Y +SK  L  L ++  +EL  FGI+V
Sbjct: 112 VTRAFLPLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKV 171

Query: 177 NCVSPYAVSTPLAKDFLKLAD-DGLGGMYSNLKGAVLEPEDAAEAA 221
             + P  V T  A +    A  D     Y+  +  + E      + 
Sbjct: 172 TIIEPGPVRTGFADNAAGSALEDPEISPYAPERKEIKENAAGVGSN 217

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  101 bits (253), Expect = 9e-26
 Identities = 65/254 (25%), Positives = 105/254 (41%), Gaps = 34/254 (13%)

Query: 15  ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT 74
            L+TG A+GIG   AR  ++ GA+V   D   +    +  D+       +       DV 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFAT---YKLDVA 57

Query: 75  KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRN 134
               ++  V     +YG +D++ N AG +  +   I      +++   ++N  G F   N
Sbjct: 58  DSAAVDEVVQRLEREYGPIDVLVNVAG-ILRLGA-IDSLSDEDWQATFAVNTFGVF---N 112

Query: 135 MLLGVCG-----------IIGGAATH-------AYTSSKHGLLGLMKNTAVELGRFGIRV 176
           +   V              +G  A +       AY +SK  L  L K   +EL  +GIR 
Sbjct: 113 VSQAVSPRMKRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRC 172

Query: 177 NCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--------GAVLEPEDAAEAALYLGSDE 228
           N VSP +  T + +            +  + +        G + EP D A A L+L SD 
Sbjct: 173 NVVSPGSTDTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVLFLASDL 232

Query: 229 SKCVSGHNLVVDGG 242
           +  ++ H+LVVDGG
Sbjct: 233 ASHITMHDLVVDGG 246

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 1e-25
 Identities = 75/263 (28%), Positives = 117/263 (44%), Gaps = 40/263 (15%)

Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG-ESVCKDIGSSSSSASG 65
           L  L G+VA +TG   GIG+  A   ++ GA V + D++ D G     + I ++   A  
Sbjct: 3   LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAI- 61

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              +  DVT + D+  AV     + G L +  N AG  +      ++ +Q  ++ ++ IN
Sbjct: 62  --QIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQ--WQTVMDIN 117

Query: 126 LVGAFL-----GRNML----------LGVCGII---GGAATHAYTSSKHGLLGLMKNTAV 167
           L G FL      R ML            + GII   G    H Y +SK G++ L K+ A+
Sbjct: 118 LTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAH-YNASKAGVIHLSKSLAM 176

Query: 168 ELGRFGIRVNCVSPYAVSTPLAK-------DFLKLADDGLGGMYSNLKGAVLEPEDAAEA 220
           E    GIRVN +SP   +TP+           L      +  M           ++    
Sbjct: 177 EWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAK--------VDEMVGP 228

Query: 221 ALYLGSDESKCVSGHNLVVDGGF 243
           A++L SD +   +G +L+VDGGF
Sbjct: 229 AVFLLSDAASFCTGVDLLVDGGF 251

Length = 254

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  100 bits (250), Expect = 2e-25
 Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 31/256 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L+GK AL+TGG +GIG       +  GA+V          +    +         G   
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEG--- 59

Query: 69  VHCDVTKEKDIENAVNTAVTQY-GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
             CDV+   + +  ++T  + + GKL+I+ NNAGT   ++    D  + ++  I+S N  
Sbjct: 60  SVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTN--IRKEAKDYTEEDYSLIMSTNFE 117

Query: 128 GAF-LGR--NMLL------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            A+ L R  + LL             V G+I   +   Y ++K  L  L ++ A E  + 
Sbjct: 118 AAYHLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKD 177

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-----KGAVLEPEDAAEAALYLGSD 227
            IRVN V+P+ ++TPL +  ++  ++        +          EPE+ A    +L   
Sbjct: 178 NIRVNAVAPWVIATPLVEPVIQQKEN-----LDKVIERTPLKRFGEPEEVAALVAFLCMP 232

Query: 228 ESKCVSGHNLVVDGGF 243
            +  ++G  + VDGG 
Sbjct: 233 AASYITGQIIAVDGGL 248

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 3e-25
 Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 34/194 (17%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           LQGK+ ++TGG+ GIG    +    +GA V+ ADI                       +V
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHG------------GDGQHENYQFV 54

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGT------VDEVKPN-ILDNDQAEFERIL 122
             DV+  +++ + V   + ++G++D + NNAG       VDE  P    + ++A F+++ 
Sbjct: 55  PTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMF 114

Query: 123 SINLVGAFL-----GRNMLLGVCGII----------GGAATHAYTSSKHGLLGLMKNTAV 167
           +IN  G FL      R M+    G+I          G      Y ++K  L    ++ A 
Sbjct: 115 NINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAK 174

Query: 168 ELGRFGIRVNCVSP 181
           ELG+  IRV  V+P
Sbjct: 175 ELGKHNIRVVGVAP 188

Length = 266

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 4e-25
 Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 37/260 (14%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIA--DIKDDLGESVCKDIGSSSSSASG- 65
           +L+GKVALITGG  GIG   A LF+K GA + I   D  +D  E+             G 
Sbjct: 43  KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANET------KQRVEKEGV 96

Query: 66  -CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
            C  +  DV+ E   ++AV   V + G+LDI+ NNA      + ++ D    + ++    
Sbjct: 97  KCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAA-FQYPQQSLEDITAEQLDKTFKT 155

Query: 125 NLVGAF---------LGRN----MLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           N+   F         L +         + G  G      Y+++K  +    ++ A  L +
Sbjct: 156 NIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQ 215

Query: 172 FGIRVNCVSPYAVSTPL------AKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG 225
            GIRVN V+P  + TPL       +   +   +      + ++    +PE+ A A ++L 
Sbjct: 216 KGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSN------TPMQRPG-QPEELAPAYVFLA 268

Query: 226 SDESKCVSGHNLVVDGGFAI 245
           S +S  ++G  L V+GG  +
Sbjct: 269 SPDSSYITGQMLHVNGGVIV 288

Length = 290

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 98.7 bits (246), Expect = 6e-25
 Identities = 77/256 (30%), Positives = 113/256 (44%), Gaps = 34/256 (13%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSY 68
           L  KVA++TG +RGIG   AR  +  G  V +         + +  +I ++   A     
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIA--- 59

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  DV     +    + A T +G++D++ NNAG +      I D D  +F+R ++ NL G
Sbjct: 60  VQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGT--IADFDLEDFDRTIATNLRG 117

Query: 129 AFL------------GR--NMLLGVCGII--GGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           AF+            GR  N+   V  +   G      Y +SK  + GL+   A EL   
Sbjct: 118 AFVVLREAARHLGQGGRIINLSTSVIALPLPGYG---PYAASKAAVEGLVHVLANELRGR 174

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE----PEDAAEAALYLGSDE 228
           GI VN V+P  V+T L   F            + L  A LE    PE+ A A  +L   +
Sbjct: 175 GITVNAVAPGPVATEL---FFNGKSAEQIDQLAGL--APLERLGTPEEIAAAVAFLAGPD 229

Query: 229 SKCVSGHNLVVDGGFA 244
              V+G  L V+GGFA
Sbjct: 230 GAWVNGQVLRVNGGFA 245

Length = 245

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 98.6 bits (246), Expect = 8e-25
 Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 52/268 (19%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSSSASGC 66
            ++  +  L+TGG+RG+G   AR F++ GA+V++   + +D  E++  ++G  + +    
Sbjct: 1   MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIA---- 56

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGK-LDIMFNNAGTVD-----EVKPNILDNDQAEFER 120
             +  DVT  + ++    TA   +GK +  + NNA   D     + +    D    +F++
Sbjct: 57  --LQADVTDREQVQAMFATATEHFGKPITTVVNNA-LADFSFDGDARKKADDITWEDFQQ 113

Query: 121 ILSINLVGAFLGRNMLLGVC--------GIIGGAAT----------HAYTSSKHGLLGLM 162
            L  ++ GA    N +            G I    T          H YT++K  LLGL 
Sbjct: 114 QLEGSVKGAL---NTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLT 170

Query: 163 KNTAVELGRFGIRVNCVS--------PYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEP 214
           +N A ELG +GI VN VS          A +     D +           +     V  P
Sbjct: 171 RNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIA---------ATTPLRKVTTP 221

Query: 215 EDAAEAALYLGSDESKCVSGHNLVVDGG 242
           ++ A+A L+  S  ++ V+G NLVVDGG
Sbjct: 222 QEFADAVLFFASPWARAVTGQNLVVDGG 249

Length = 253

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 98.9 bits (247), Expect = 8e-25
 Identities = 72/267 (26%), Positives = 111/267 (41%), Gaps = 47/267 (17%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+GK  LITG    IG    +   + G  V+ ADI  +    + + +G    S      V
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLS-LV 60

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNA-------GTV-DEVKPNILDNDQAEFERI 121
             D+T ++ +E  ++ +  +YGK+D   N A       G    +V          +F   
Sbjct: 61  ELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSL-------DDFNEN 113

Query: 122 LSINLVGAFL------------GRNMLLGVCGIIGGAATH-------------AYTSSKH 156
           LS++L  +FL            G   L+ +  I G  A                Y + K 
Sbjct: 114 LSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKA 173

Query: 157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPED 216
           G++ L K  A       IRVNCVSP  +     + FL            N KG +L+P+D
Sbjct: 174 GIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKK-----CCNGKG-MLDPDD 227

Query: 217 AAEAALYLGSDESKCVSGHNLVVDGGF 243
                ++L SD+SK ++G N++VD GF
Sbjct: 228 ICGTLVFLLSDQSKYITGQNIIVDDGF 254

Length = 256

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 98.1 bits (245), Expect = 9e-25
 Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 24/195 (12%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSS-SSASGCSYVH 70
           GK  LITGG+ GIG+  A+   K GA V+I    +   E   ++I + + +S    SY+ 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF 130
            D++  +++E A   AV + G  D++ N AG          D    EFER + +N  G+ 
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGIS-IPGL-FEDLTAEEFERGMDVNYFGSL 118

Query: 131 L-------------GRNMLL-----GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
                           +++       + GI G +   AY  SK  L GL ++   EL  +
Sbjct: 119 NVAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYS---AYCPSKFALRGLAESLRQELKPY 175

Query: 173 GIRVNCVSPYAVSTP 187
            IRV+ V P    TP
Sbjct: 176 NIRVSVVYPPDTDTP 190

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 98.0 bits (245), Expect = 2e-24
 Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 45/273 (16%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+GKVA+ITGG   +G   A+  ++ GAKV I D   +  E+V  +I ++   A     V
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALA---V 64

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-------TVDEVKPNI------LDNDQA 116
             DV  ++ +E A    +  +G  DI+ N AG       T +E    I       D D+ 
Sbjct: 65  KADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEE 124

Query: 117 EFERILSINLVGAFL-----GRNMLLGVCG-IIGGAATHAYT---------SSKHGLLGL 161
            FE +  +NL+G  L      ++M+    G II  ++ +A+T         ++K  +   
Sbjct: 125 GFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNF 184

Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL--------- 212
            +  AV   + GIRVN ++P    T   +  L   D    G  +     +L         
Sbjct: 185 TQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNED----GSLTERANKILAHTPMGRFG 240

Query: 213 EPEDAAEAALYLGSDE-SKCVSGHNLVVDGGFA 244
           +PE+     L+L  ++ S  V+G  L VDGGF+
Sbjct: 241 KPEELLGTLLWLADEKASSFVTGVVLPVDGGFS 273

Length = 278

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 96.3 bits (240), Expect = 7e-24
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 27/190 (14%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI----GSSSSSASGCS 67
            +VA++ GG + +G       ++ G +V +ADI  +   +V ++I    G   +      
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYG---- 57

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
               D T E+ +          +G++D++  NAG        I D    +F+R L +NLV
Sbjct: 58  -FGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAF--ITDFQLGDFDRSLQVNLV 114

Query: 128 GAFL-----GRNMLL-GVCGII----------GGAATHAYTSSKHGLLGLMKNTAVELGR 171
           G FL      R M+  G+ G I          G      Y+++K G +GL ++ A++L  
Sbjct: 115 GYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAE 174

Query: 172 FGIRVNCVSP 181
           +GI V+ +  
Sbjct: 175 YGITVHSLML 184

Length = 259

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 96.1 bits (239), Expect = 8e-24
 Identities = 77/247 (31%), Positives = 110/247 (44%), Gaps = 26/247 (10%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
           G+VAL+TG ARGIG   A      G +V++AD+  + G  V K +G ++       ++  
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENA------WFIAM 63

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           DV  E  +   V   + Q+G+LD +  NA   D     +     A + R+L++NL G  L
Sbjct: 64  DVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPML 123

Query: 132 GRN----MLLGVCGIIGGAA----------THAYTSSKHGLLGLMKNTAVELGRFGIRVN 177
                   L    G I   A          T AY +SK GLL L    A+ LG   IRVN
Sbjct: 124 LAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGP-EIRVN 182

Query: 178 CVSPYAVST--PLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGH 235
            VSP  +    P  +    L++        +  G V   ED A    +L S ++  V+G 
Sbjct: 183 AVSPGWIDARDPSQRRAEPLSE---ADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQ 239

Query: 236 NLVVDGG 242
             VVDGG
Sbjct: 240 EFVVDGG 246

Length = 255

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 95.4 bits (238), Expect = 2e-23
 Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 31/231 (13%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
           GKV +ITG + GIG   A   ++ GA++++A   +    S+ +++      A     V  
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALV---VPT 57

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERILSINL 126
           DV+  +  E  +  AV ++G +DI+ NNAG       DE+       D + FER++ +N 
Sbjct: 58  DVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELT------DLSVFERVMRVNY 111

Query: 127 VGAFL-------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           +GA               G+ +++  + G+ G      Y +SKH L G   +  +EL   
Sbjct: 112 LGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADD 171

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGA-VLEPEDAAEAAL 222
           G+ V  V P  V+T + K  L      LG   S ++ + ++  E+ AEA L
Sbjct: 172 GVAVTVVCPGFVATDIRKRALDGDGKPLGK--SPMQESKIMSAEECAEAIL 220

Length = 263

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 95.0 bits (237), Expect = 2e-23
 Identities = 77/267 (28%), Positives = 108/267 (40%), Gaps = 40/267 (14%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L G+VALITGG  GIG      F   GA+V + +   +   S+ +  G       G   
Sbjct: 3   WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEG--- 59

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVD------EVKPNILDNDQAEFERIL 122
              DVT   D + AV+  V  +GKLD    NAG  D      ++    LD     F+ I 
Sbjct: 60  ---DVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLD---TAFDEIF 113

Query: 123 SINLVGAFLGRN--------------MLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
           ++N+ G  LG                  L       G     YT+SKH ++GL++  A E
Sbjct: 114 NVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYE 173

Query: 169 LGRFGIRVNCVSPYAVSTPLAK-DFLKLADD------GLGGMYSNLK--GAVLEPEDAAE 219
           L    IRVN V+P    T L     L   +       GL  M + +       +PED   
Sbjct: 174 LAP-KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTG 232

Query: 220 AALYLGSDE-SKCVSGHNLVVDGGFAI 245
             + L S   S+ ++G  +  DGG  I
Sbjct: 233 PYVLLASRRNSRALTGVVINADGGLGI 259

Length = 263

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 94.3 bits (234), Expect = 3e-23
 Identities = 81/258 (31%), Positives = 124/258 (48%), Gaps = 26/258 (10%)

Query: 5   LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSAS 64
           L L  L GK ALITG + GIG+  A  + + GA+V IA    D  E +  +I    +S  
Sbjct: 2   LDLFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEI---GTSGG 58

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
               V CDV++ + + + ++    + G +DI   NAG +  V P +LD    EF+R+ + 
Sbjct: 59  KVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGII-TVTP-MLDMPLEEFQRLQNT 116

Query: 125 NLVGAFL-----GRNML-LGVCGIIGGAATHA------------YTSSKHGLLGLMKNTA 166
           N+ G FL      + M+  G  G+I   A+ +            Y +SK  ++ L K  A
Sbjct: 117 NVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMA 176

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS 226
           VEL    IRVN VSP  + T L +      +           G +  PE+ A   LYL S
Sbjct: 177 VELAPHKIRVNSVSPGYILTELVE---PYTEYQPLWEPKIPLGRLGRPEELAGLYLYLAS 233

Query: 227 DESKCVSGHNLVVDGGFA 244
           + S  ++G ++V+DGG+ 
Sbjct: 234 EASSYMTGSDIVIDGGYT 251

Length = 253

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 94.2 bits (235), Expect = 4e-23
 Identities = 67/263 (25%), Positives = 105/263 (39%), Gaps = 40/263 (15%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
             L GK AL+TGG +GIG  T     + GA+V+          S   D+        G  
Sbjct: 5   LELAGKRALVTGGTKGIGAATVARLLEAGARVVTT------ARSRPDDL------PEGVE 52

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
           +V  D+T  +         + + G +DI+ +  G               E++  L++NL+
Sbjct: 53  FVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLL 112

Query: 128 GAF-LGRNMLLGVCGIIGGAATH---------------AYTSSKHGLLGLMKNTAVELGR 171
            A  L R +L G+     G   H               AY ++K  L    K+ + E+  
Sbjct: 113 AAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAP 172

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL------------EPEDAAE 219
            G+RVN VSP  + T  A    +   +  G  Y   K  ++            EPE+ AE
Sbjct: 173 KGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAE 232

Query: 220 AALYLGSDESKCVSGHNLVVDGG 242
              +L SD +  ++G   V+DGG
Sbjct: 233 LIAFLASDRAASITGTEYVIDGG 255

Length = 260

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 93.5 bits (233), Expect = 8e-23
 Identities = 71/257 (27%), Positives = 122/257 (47%), Gaps = 31/257 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L+ KV +ITGGA+G+G   A   ++ GAK+ + D+  +  E    + G+  +   G  Y
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRG--Y 59

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDE-----VKPNILDNDQ--AEFERI 121
              +VT E+D+E         +G+L+ + NNAG + +      K   + +     +F+ +
Sbjct: 60  A-ANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSV 118

Query: 122 LSINLVGAFL-GRN----ML-LGVCGII---------GGAATHAYTSSKHGLLGLMKNTA 166
           + +NL G FL GR     M+  G  G+I         G      Y++SK G+  +    A
Sbjct: 119 IDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQTNYSASKAGVAAMTVTWA 178

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLG 225
            EL R+GIRV  ++P  + T +      +  + L  +   +  G + EPE+ A    ++ 
Sbjct: 179 KELARYGIRVAAIAPGVIETEMTAA---MKPEALERLEKMIPVGRLGEPEEIAHTVRFI- 234

Query: 226 SDESKCVSGHNLVVDGG 242
             E+  V+G  L +DGG
Sbjct: 235 -IENDYVTGRVLEIDGG 250

Length = 253

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 93.2 bits (232), Expect = 9e-23
 Identities = 77/267 (28%), Positives = 108/267 (40%), Gaps = 41/267 (15%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L+G+VALITGG  G+G      F   GAKV + D   +    +  D G +     G   
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEG--- 57

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG------TVDEVKPNILDNDQAEFERIL 122
              DV    D E AV   V ++GKLD    NAG      ++ ++    LD     F+ + 
Sbjct: 58  ---DVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLD---EAFDELF 111

Query: 123 SINLVGAFLGRN--------------MLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
            IN+ G  LG                  +   G   G     YT+SKH ++GL+K  A E
Sbjct: 112 HINVKGYILGAKAALPALYATEGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYE 171

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK---------GAVLEPEDAAE 219
           L    IRVN V+P  + T L      L           L          G   EPED   
Sbjct: 172 LAPH-IRVNGVAPGGMVTDLRG-PASLGQGETSISTPPLDDMLKSILPLGFAPEPEDYTG 229

Query: 220 AALYLGS-DESKCVSGHNLVVDGGFAI 245
           A ++L S  +++  +G  +  DGG  +
Sbjct: 230 AYVFLASRGDNRPATGTVINYDGGMGV 256

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 92.8 bits (231), Expect = 1e-22
 Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 57/266 (21%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           R  G+V L+TG   G+G   A  F++ GAKV++ D+  D   S     G SSS+A     
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGS-----GKSSSAAD---- 52

Query: 69  VHCDVTKE------------KDIENA---VNTAVTQYGKLDIMFNNAGTVDEVKPNILDN 113
               V  E              +E+    V TA+  +G++DI+ NNAG + +   +    
Sbjct: 53  ---KVVDEIKAAGGKAVANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRDR--SFAKM 107

Query: 114 DQAEFERILSINLVGAFL--------------GR-NMLLGVCGIIGGAATHAYTSSKHGL 158
            + +++ ++ ++L G+F               GR        G+ G      Y+++K GL
Sbjct: 108 SEEDWDLVMRVHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGL 167

Query: 159 LGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAA 218
           LGL    A+E  ++ I  N ++P A  + + +    + +D             L+PE  A
Sbjct: 168 LGLSNTLAIEGAKYNITCNTIAPAA-GSRMTETV--MPEDLF---------DALKPEYVA 215

Query: 219 EAALYLGSDESKCVSGHNLVVDGGFA 244
              LYL  +  + V+G    V  G+ 
Sbjct: 216 PLVLYLCHESCE-VTGGLFEVGAGWI 240

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 92.5 bits (230), Expect = 1e-22
 Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 31/259 (11%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASG-- 65
              GKVAL+TG +RGIG+  A   ++ G  + +   +     E   ++I      A G  
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI-----EALGRK 55

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              V  +V   + I+        ++G+LD+  NNA +   ++P  ++ +++ ++  ++IN
Sbjct: 56  ALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAAS-GVLRP-AMELEESHWDWTMNIN 113

Query: 126 ----LVGAFLGRNMLLGVCG--IIGGAATHA------YTS---SKHGLLGLMKNTAVELG 170
               L  A     ++  V G  II  ++  +      YT+   SK  L  L +  AVEL 
Sbjct: 114 AKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELA 173

Query: 171 RFGIRVNCVSPYAVSTPLAKDFL---KLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD 227
             GI VN VS  AV T   K F    +L +D          G ++EPED A A L+L S 
Sbjct: 174 PKGIAVNAVSGGAVDTDALKHFPNREELLEDARA---KTPAGRMVEPEDVANAVLFLCSP 230

Query: 228 ESKCVSGHNLVVDGGFAIV 246
           E+  + G  ++VDGG +++
Sbjct: 231 EADMIRGQTIIVDGGRSLL 249

Length = 250

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 92.7 bits (231), Expect = 2e-22
 Identities = 77/256 (30%), Positives = 115/256 (44%), Gaps = 25/256 (9%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD--DLGESVCKDIGSSSSSASGC 66
           +L+GK ALITGG  GIG   A  F++ GA V I  + +  D  E   K I         C
Sbjct: 23  KLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRK---C 79

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
             +  D+  E    + V   V ++GKLDI+ NNA      + +I D    + E+    N+
Sbjct: 80  LLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAA-YQHPQESIEDITTEQLEKTFRTNI 138

Query: 127 VGAF-LGRNML-LGVCG--II---------GGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
              F L +  L     G  II         G      Y ++K  ++   +  +++L   G
Sbjct: 139 FSMFYLTKAALPHLKKGSSIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAEKG 198

Query: 174 IRVNCVSPYAVSTPL-AKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKC 231
           IRVN V+P  + TPL    F +      G   S +  G   +P + A A ++L S +S  
Sbjct: 199 IRVNAVAPGPIWTPLIPSSFPEEKVSEFG---SQVPMGRAGQPAEVAPAYVFLASQDSSY 255

Query: 232 VSGHNLVVDGGFAIVN 247
           V+G  L V+GG  I+N
Sbjct: 256 VTGQVLHVNGG-EIIN 270

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 92.3 bits (230), Expect = 2e-22
 Identities = 66/266 (24%), Positives = 103/266 (38%), Gaps = 57/266 (21%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
             GK   +TG A+GIG   A  F + GAKV+  D            +       +     
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFD---------QAFLTQEDYPFAT---F 53

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE------FERILS 123
             DV+    +       + + G LD++ N AG        IL     +      +++  +
Sbjct: 54  VLDVSDAAAVAQVCQRLLAETGPLDVLVNAAG--------ILRMGATDSLSDEDWQQTFA 105

Query: 124 INLVGAFLGRNMLLGVCG-----------IIGGAATH-------AYTSSKHGLLGLMKNT 165
           +N  GAF   N+   V              +G  A H       AY +SK  L  L K  
Sbjct: 106 VNAGGAF---NLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCV 162

Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD------GLGGMYSN---LKGAVLEPED 216
            +EL  +G+R N VSP +  T + +      D       G    +     L G +  P++
Sbjct: 163 GLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPL-GKIARPQE 221

Query: 217 AAEAALYLGSDESKCVSGHNLVVDGG 242
            A A L+L SD +  ++  ++VVDGG
Sbjct: 222 IANAVLFLASDLASHITLQDIVVDGG 247

Length = 252

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 91.9 bits (229), Expect = 3e-22
 Identities = 69/234 (29%), Positives = 99/234 (42%), Gaps = 32/234 (13%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESV---CKDIGSSSSSASG 65
           LQGKV +ITG + GIGE  A   ++ GA+ VL A  ++ L E V   C ++G+ S     
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERL-EEVKSECLELGAPS----- 54

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              V  D++  +D E  V  A+  +G LDI+ NNAG    ++    D       +I+ +N
Sbjct: 55  PHVVPLDMSDLEDAEQVVEEALKLFGGLDILINNAGI--SMRSLFHDTSIDVDRKIMEVN 112

Query: 126 LVG------AFLGRNMLLG-----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
             G      A L    L+            + G IG     AY +SKH L G   +   E
Sbjct: 113 YFGPVALTKAAL--PHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAE 170

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL 222
           L    I V  V P  + T +A + L         M       +  PE+ A   L
Sbjct: 171 LSEPNISVTVVCPGLIDTNIAMNALSGDGSMSAKMDDTTANGM-SPEECALEIL 223

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 91.0 bits (226), Expect = 7e-22
 Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 26/251 (10%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L GK  LITG A+GIG   A   +++GA+++I DI  +  E     +      A    + 
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPF- 65

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             +VT ++++E A+       G +D++ NNAG +    P   +  + E+  ++++N    
Sbjct: 66  --NVTHKQEVEAAIEHIEKDIGPIDVLINNAG-IQRRHP-FTEFPEQEWNDVIAVNQTAV 121

Query: 130 FL-----GRNM-------LLGVCGI---IGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           FL      R M       ++ +C +   +G      Y +SK  +  L +   VEL R  I
Sbjct: 122 FLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNI 181

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDG--LGGMYSNLKGAVL-EPEDAAEAALYLGSDESKC 231
           +VN ++P    T + K    L +D      +      A   +P++   AA++L S  S  
Sbjct: 182 QVNGIAPGYFKTEMTK---ALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDF 238

Query: 232 VSGHNLVVDGG 242
           V+GH L VDGG
Sbjct: 239 VNGHLLFVDGG 249

Length = 254

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 89.9 bits (223), Expect = 1e-21
 Identities = 66/229 (28%), Positives = 101/229 (44%), Gaps = 21/229 (9%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           LQGKVAL+TG + GIGE TAR  +  GA V IA  + D  E++  ++ +    A     +
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKA---LVL 57

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             DVT E+ ++ AV   V   G+LDI+ NNAG +  +   + D D  ++ R++  NL+G 
Sbjct: 58  ELDVTDEQQVDAAVERTVEALGRLDILVNNAGIM--LLGPVEDADTTDWTRMIDTNLLGL 115

Query: 130 FLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
               +  L                V G +    +  Y ++K G+    +    E+   G+
Sbjct: 116 MYTTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGV 175

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
           RV  + P  V T L  D +                  L+ ED A A  Y
Sbjct: 176 RVVVIEPGTVDTELR-DHITHTITKEAYEERISTIRKLQAEDIAAAVRY 223

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 90.3 bits (224), Expect = 1e-21
 Identities = 74/264 (28%), Positives = 113/264 (42%), Gaps = 41/264 (15%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           R +GKV ++TG A+GIG   A   +  GA+VL+ D   +L   V  +I ++  +A     
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDR-SELVHEVLAEILAAGDAAHV--- 56

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKP---NILDNDQAEFERILSIN 125
              D+      +  V  AV ++G++D++ NN G     KP      +  +AE  R L   
Sbjct: 57  HTADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPT 116

Query: 126 L--VGAFLGRNMLLGVCGII---GGAATH-----AYTSSKHGLLGLMKNTAVELGRFGIR 175
           L    A L  +ML    G+I      AT       Y+++K G+  L  + A E  R GIR
Sbjct: 117 LWCCRAVLP-HMLERQQGVIVNVSSIATRGIYRIPYSAAKGGVNALTASLAFEHARDGIR 175

Query: 176 VNCVSPYAVSTP-----------------LAKDFLKLADDGLGGMYSNLKGAVLEPEDAA 218
           VN V+P     P                   +  +    D      S+L G     ++  
Sbjct: 176 VNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLD------SSLMGRYGTIDEQV 229

Query: 219 EAALYLGSDESKCVSGHNLVVDGG 242
            A L+L SDE+  ++G  L V GG
Sbjct: 230 RAILFLASDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 90.5 bits (225), Expect = 1e-21
 Identities = 70/275 (25%), Positives = 125/275 (45%), Gaps = 50/275 (18%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIK---------DDLGESVCKDIGSSS 60
           L G+V ++TG   GIG   A  F+  GA+V++ DI              ++V  +I    
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEI---- 59

Query: 61  SSASGCSYVHC-DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTV-DEVKPNILDNDQAEF 118
            +A G +  +  D+       N V+ AV  +G LD++ NNAG + D +   I +  + E+
Sbjct: 60  VAAGGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRM---IANMSEEEW 116

Query: 119 ERILSINLVGAFL---------------GRNMLLGV------CGIIGGAATHAYTSSKHG 157
           + +++++L G F                GR +   +       G+ G      Y+++K G
Sbjct: 117 DAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAG 176

Query: 158 LLGLMKNTAVELGRFGIRVNCVSPYA---VSTPLAKDFLKLADDGLGGMYSNLKGAVLEP 214
           +  L    A ELGR+G+ VN ++P A   ++  +  + +   ++G     +        P
Sbjct: 177 IAALTLVAAAELGRYGVTVNAIAPAARTRMTETVFAEMMAKPEEGEFDAMA--------P 228

Query: 215 EDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAG 249
           E+ +   ++LGS ES+ V+G    V+GG   V  G
Sbjct: 229 ENVSPLVVWLGSAESRDVTGKVFEVEGGKISVAEG 263

Length = 286

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 90.1 bits (224), Expect = 2e-21
 Identities = 80/252 (31%), Positives = 124/252 (49%), Gaps = 41/252 (16%)

Query: 10  LQGKVALITGGA-RGIGECTARLFSKHGAKVLIADIKDD-LGESVCKDIGSSSSSASGCS 67
           L GKV L+T  A  GIG  TAR   + GA+V+I+DI +  LGE+  +      ++  G  
Sbjct: 15  LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADE-----LAAELGLG 69

Query: 68  YVH---CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
            V    CDVT E  ++  ++ AV + G+LD++ NNAG   +    ++D    E+ R+L +
Sbjct: 70  RVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQT--PVVDMTDDEWSRVLDV 127

Query: 125 NLVGAF-LGRNML-----LGVCGII-------GGAATHA---YTSSKHGLLGLMKNTAVE 168
            L G F   R  L      G  G+I       G  A H    Y ++K G++ L + +A+E
Sbjct: 128 TLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALE 187

Query: 169 LGRFGIRVNCVSP-YAVSTPLAK----DFL-KLADDGLGGMYSNLKGAVLEPEDAAEAAL 222
              +G+R+N V+P  A+   LAK    + L +LA     G  +       EP + A    
Sbjct: 188 AAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAA-------EPWEVANVIA 240

Query: 223 YLGSDESKCVSG 234
           +L SD S  ++G
Sbjct: 241 FLASDYSSYLTG 252

Length = 262

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 89.5 bits (222), Expect = 2e-21
 Identities = 67/256 (26%), Positives = 110/256 (42%), Gaps = 45/256 (17%)

Query: 15  ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT 74
            ++TG A+GIG   AR   + GA V+  D+   L       +  +            DV 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTPL----------DVA 50

Query: 75  KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-FERILSINLVGAFLGR 133
               +    +  + ++G +D + N AG +   +P   D    E +E+  ++N+ G F   
Sbjct: 51  DAAAVREVCSRLLAEHGPIDALVNCAGVL---RPGATDPLSTEDWEQTFAVNVTGVF--- 104

Query: 134 NMLLGVCG-----------IIGGAATH-------AYTSSKHGLLGLMKNTAVELGRFGIR 175
           N+L  V              +   A H       AY +SK  L  L K   +EL  +G+R
Sbjct: 105 NLLQAVAPHMKDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVR 164

Query: 176 VNCVSPYAVSTPLAKDFLKLADDG----LGGMYSNLK-----GAVLEPEDAAEAALYLGS 226
            N VSP +  T + +      +DG    + G+    +     G + +P D A A L+L S
Sbjct: 165 CNVVSPGSTDTAMQRTLWH-DEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLAS 223

Query: 227 DESKCVSGHNLVVDGG 242
           D++  ++ H+LVVDGG
Sbjct: 224 DQAGHITMHDLVVDGG 239

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 88.9 bits (221), Expect = 3e-21
 Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 48/237 (20%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKV-LIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
             ALITG + GIG+ TA  F+K G  + L+A  +D L E++  ++ S+   A   +    
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDAL-EALAAELRSTGVKA---AAYSI 62

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           D++  + I   +   + Q+G  D++ NNAG        +L+   ++++ ++ +NL   F 
Sbjct: 63  DLSNPEAIAPGIAELLEQFGCPDVLINNAGMA--YTGPLLEMPLSDWQWVIQLNLTSVFQ 120

Query: 132 GRNMLLGV--------CGIIGGAATHA----------YTSSKHGLLGLMKNTAVELGRFG 173
                  V         G+I   ++ A          Y  SK  L    K  A E    G
Sbjct: 121 ---CCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHG 177

Query: 174 IRVNCVSPYAVSTPL------AKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL 224
           IRV  ++  AV+TPL        DF    D          + A+L PE  A+  L+L
Sbjct: 178 IRVCTITLGAVNTPLWDTETVQADF----D----------RSAMLSPEQVAQTILHL 220

Length = 241

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 89.0 bits (221), Expect = 3e-21
 Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 35/256 (13%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSY 68
           L+GKVAL+TG   G+G+  A   ++ GA ++ A   +    +   + +G    S      
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLS------ 56

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  D++  + I+  V++AV ++G +DI+ NNAG +   + +  +  + +++ ++++NL  
Sbjct: 57  LTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIR--RADAEEFSEKDWDDVMNVNLKS 114

Query: 129 AFL-----GRNMLL-GVCGII----------GGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            F       ++ L  G  G I          GG    +YT+SKH + GL K  A E    
Sbjct: 115 VFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAK 174

Query: 173 GIRVNCVSPYAVST----PLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSD 227
           GI VN ++P  ++T     L  D  + A      +   +  G    P+D    A++L S 
Sbjct: 175 GINVNAIAPGYMATNNTQALRADEDRNAA-----ILERIPAGRWGTPDDIGGPAVFLASS 229

Query: 228 ESKCVSGHNLVVDGGF 243
            S  V+G+ L VDGG+
Sbjct: 230 ASDYVNGYTLAVDGGW 245

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 87.9 bits (218), Expect = 4e-21
 Identities = 75/235 (31%), Positives = 99/235 (42%), Gaps = 52/235 (22%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
           K AL+TG +RGIGE TARL    G +V I A  +  L  +  +++      A        
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEGVLGLA-------G 53

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           DV  E D+  AV+     +G LD + NNAG V  +KP + +    E+  +L  NL GAF 
Sbjct: 54  DVRDEADVRRAVDAMEEAFGGLDALVNNAG-VGVMKP-VEELTPEEWRLVLDTNLTGAFY 111

Query: 132 GR------------------NMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
                                 L G     GGAA   Y +SK GLLGL +   ++L    
Sbjct: 112 CIHKAAPALLRRGGGTIVNVGSLAGKNAFKGGAA---YNASKFGLLGLSEAAMLDLREAN 168

Query: 174 IRVNCVSPYAVSTPLA----KDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL 224
           IRV  V P +V T  A        KLA                 PED A+A L+ 
Sbjct: 169 IRVVNVMPGSVDTGFAGSPEGQAWKLA-----------------PEDVAQAVLFA 206

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 88.8 bits (221), Expect = 4e-21
 Identities = 67/232 (28%), Positives = 92/232 (39%), Gaps = 45/232 (19%)

Query: 16  LITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK 75
            ITG A GIG  TA LF+  G +V   DI +    ++  ++G     A        DVT 
Sbjct: 5   FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG-----AGNAWTGALDVTD 59

Query: 76  EKDIENAVN--TAVTQYGKLDIMFNNAGTVDEVKPNIL------DNDQAEFERILSINLV 127
               + A+    A T  G+LD++FNNAG        IL      D      +R++ IN+ 
Sbjct: 60  RAAWDAALADFAAATG-GRLDVLFNNAG--------ILRGGPFEDIPLEAHDRVIDINVK 110

Query: 128 GAFLGRNMLL-------GVC--------GIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           G   G +  L       G           I G      Y+++K  + GL +   +E  R 
Sbjct: 111 GVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRH 170

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--GAVLEPEDAAEAAL 222
           GIRV  V P  V T +      L          + K  G  L PED AEA  
Sbjct: 171 GIRVADVMPLFVDTAM------LDGTSNEVDAGSTKRLGVRLTPEDVAEAVW 216

Length = 260

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 88.5 bits (220), Expect = 6e-21
 Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 28/242 (11%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKV-LIADIKDDLGESVCKDIGSSSSSASGCSY 68
           ++GK ALITG + GIG   A+  ++ G  + L+A  +D L E++ K++   +        
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKL-EALAKELEDKTGVE--VEV 60

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  D++  + +E   +    + G +D++ NNAG      P  L+    E E ++ +N++ 
Sbjct: 61  IPADLSDPEALERLEDELKERGGPIDVLVNNAGFGT-FGP-FLELSLDEEEEMIQLNILA 118

Query: 129 ------AFL------GRNMLLGVC---GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
                 A L      G   ++ +    G+I       Y+++K  +L   +    EL   G
Sbjct: 119 LTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTG 178

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY-LGSDESKCV 232
           ++V  V P    T    +F       +     +    VL PED AEAAL  L   + + +
Sbjct: 179 VKVTAVCPGPTRT----EFFDAKGSDVYL--LSPGELVLSPEDVAEAALKALEKGKREII 232

Query: 233 SG 234
            G
Sbjct: 233 PG 234

Length = 265

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 88.3 bits (219), Expect = 7e-21
 Identities = 72/260 (27%), Positives = 120/260 (46%), Gaps = 33/260 (12%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+GKVAL+TG + G+G   A++ ++ GAKV++A  + +  + +  +I +   +A     V
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAA---HVV 63

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             DVT  + I+ AV  A T+ G +DI+ NN+G     K  ++D   A+F+ +   N  GA
Sbjct: 64  SLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQK--LVDVTPADFDFVFDTNTRGA 121

Query: 130 F-----LGRNMLLGVCGIIGGAATH------------------AYTSSKHGLLGLMKNTA 166
           F     + + M+    G                           Y  SK  ++ + +  A
Sbjct: 122 FFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMA 181

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG--LGGMYSNLKGAVLEPEDAAEAALYL 224
           +E GR GI VN + P  + T +     +  + G  L  M    +  V +PED     L L
Sbjct: 182 LEWGRHGINVNAICPGYIDTEINHHHWE-TEQGQKLVSMLPRKR--VGKPEDLDGLLLLL 238

Query: 225 GSDESKCVSGHNLVVDGGFA 244
            +DES+ ++G  +  D GF 
Sbjct: 239 AADESQFINGAIISADDGFG 258

Length = 258

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 87.8 bits (218), Expect = 1e-20
 Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 20/192 (10%)

Query: 16  LITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK 75
           +ITG A G+G   A  +++ G ++ +AD+ ++ GE   K +  +        Y  CDV  
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGF---YQRCDVRD 60

Query: 76  EKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG------A 129
              +         ++G +D++ NNAG          +    +++  ++INL+G      A
Sbjct: 61  YSQLTALAQACEEKWGGIDVIVNNAGVASGGF--FEELSLEDWDWQIAINLMGVVKGCKA 118

Query: 130 FL------GRNMLLGV---CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVS 180
           FL          ++ +    G++ G A  +Y  +K G++ L +   VEL    I V+ V 
Sbjct: 119 FLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVC 178

Query: 181 PYAVSTPLAKDF 192
           P    T L   F
Sbjct: 179 PSFFQTNLLDSF 190

Length = 270

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 87.4 bits (216), Expect = 1e-20
 Identities = 67/254 (26%), Positives = 126/254 (49%), Gaps = 26/254 (10%)

Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSSSSSASG 65
           + +L GKVA++TGGA+GIG+      ++ GAKV+I  +   +  E++  ++G        
Sbjct: 1   MVQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYA 60

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              V  DV+K +D    V  AV  +GK+DI+ NNAG   +     L+ +  ++ER++ +N
Sbjct: 61  ---VQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNRE--DWERVIDVN 115

Query: 126 LVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           L   F   + +L                + G  GG     Y+++K G+LG  K+ A+EL 
Sbjct: 116 LSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELA 175

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSDES 229
           +  + VN + P  + T +     ++ ++    + + + K    + ++ A+  +YL  D +
Sbjct: 176 KTNVTVNAICPGFIDTEMV---AEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRDGA 232

Query: 230 KCVSGHNLVVDGGF 243
             ++G  L ++GG 
Sbjct: 233 Y-ITGQQLNINGGL 245

Length = 247

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 87.2 bits (216), Expect = 2e-20
 Identities = 75/262 (28%), Positives = 111/262 (42%), Gaps = 39/262 (14%)

Query: 11  QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVH 70
             +VAL+TG   GIG   AR   K G +V +    ++   +  K++  +   A G +   
Sbjct: 2   DSEVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRT--- 58

Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF 130
           CDV    +IE  V  AV +YG +D++ NNAG         L ++   +  ++  NL G F
Sbjct: 59  CDVRSVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADEL--WLDVVETNLTGVF 116

Query: 131 LGRNMLLGVCG--------IIGGAAT-------HA--YTSSKHGLLGLMKNTAVELGRFG 173
                +L   G        II  A+T       HA  Y++SKHG++G  K   +EL R G
Sbjct: 117 RVTKEVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 176

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE-------------PEDAAEA 220
           I VN V P  V TP+A        +    ++        +             PE+ A  
Sbjct: 177 ITVNAVCPGFVETPMAAS----VREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGM 232

Query: 221 ALYLGSDESKCVSGHNLVVDGG 242
             YL  D +  V+   L V GG
Sbjct: 233 VAYLIGDGAAAVTAQALNVCGG 254

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 86.7 bits (215), Expect = 2e-20
 Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 33/252 (13%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI-GSSSSSASGCSYVHC 71
           K+AL+TG  RGIG   AR     G +V+        G    KD       +         
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFS---GNDCAKDWFEEYGFTEDQVRLKEL 59

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAF 130
           DVT  ++   A+     + G +DI+ NNAG T D V          E+  +++ NL   F
Sbjct: 60  DVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSV---FKRMSHQEWNDVINTNLNSVF 116

Query: 131 -LGRNMLLGVC-----------------GIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            + + +   +C                 G  G      Y+++K G++G  K  A E  R+
Sbjct: 117 NVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTN---YSAAKAGMIGFTKALASEGARY 173

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKC 231
           GI VNC++P  ++TP+ +   ++  + L  + + +    L  PE+ A A  +L S+ +  
Sbjct: 174 GITVNCIAPGYIATPMVE---QMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGF 230

Query: 232 VSGHNLVVDGGF 243
           ++G  + ++GG 
Sbjct: 231 ITGETISINGGL 242

Length = 245

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 84.9 bits (211), Expect = 2e-20
 Identities = 39/172 (22%), Positives = 69/172 (40%), Gaps = 21/172 (12%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLI----ADIKDDLGESVCKDIGSSSSSASGCSY 68
              LITGG  G+G   AR  +  GA+ L+            E +  ++ +  +     + 
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAE-LVAELEALGAEV---TV 56

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
             CDV     +   +       G LD + +NAG +D+    + +     FER+L+  + G
Sbjct: 57  AACDVADRDALAALLAALPAALGPLDGVVHNAGVLDD--GPLEELTPERFERVLAPKVTG 114

Query: 129 AFLG----RNMLLG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           A+      R++ LG       V G++G      Y ++   L  L ++   E 
Sbjct: 115 AWNLHELTRDLDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 86.1 bits (214), Expect = 3e-20
 Identities = 59/257 (22%), Positives = 91/257 (35%), Gaps = 53/257 (20%)

Query: 19  GGARGIGECTARLFSKHGAKVL------------IADIKDDLGESVCKDIGSSSSSASGC 66
                I    A+  ++ GA+V+            + ++  +L   V              
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADV-------------- 48

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDE--VKPNILDNDQAEFERILSI 124
             +  DVT ++DI+          GK+D + ++     E       LD  +  F + L I
Sbjct: 49  --IPLDVTSDEDIDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDI 106

Query: 125 N------LVGAFLGRNMLLG-VCGIIGGAATHA------YTSSKHGLLGLMKNTAVELGR 171
           +      L  A        G +  +   AA            +K  L  L +  A ELGR
Sbjct: 107 SAYSFISLAKAAKPLMNEGGSIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGR 166

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM--YSNLK---GAVLEPEDAAEAALYLGS 226
            GIRVN +S     T            G   M  Y+      G     E+ A AA +L S
Sbjct: 167 KGIRVNTISAGPTKTTAGS-----GIGGFDKMVEYAEEMAPLGRNASAEEVANAAAFLLS 221

Query: 227 DESKCVSGHNLVVDGGF 243
           D ++ ++G  L VDGGF
Sbjct: 222 DLARGITGQILYVDGGF 238

Length = 239

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 86.9 bits (216), Expect = 4e-20
 Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
             L GKV ++TG ARGIG   AR     GAK+ + D+++    ++  ++G          
Sbjct: 5   TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELG----GDDRVL 60

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKP--NILDNDQAEFERILSIN 125
            V  DVT    ++ A   AV ++G +D++  NAG    +    ++   D   F R++ +N
Sbjct: 61  TVVADVTDLAAMQAAAEEAVERFGGIDVVVANAG----IASGGSVAQVDPDAFRRVIDVN 116

Query: 126 LVG------AFL-----GRNMLLGVCGIIGGAATH-------AYTSSKHGLLGLMKNTAV 167
           L+G      A L      R  +L     +   A         AY +SK G+        +
Sbjct: 117 LLGVFHTVRATLPALIERRGYVL----QVSSLAAFAAAPGMAAYCASKAGVEAFANALRL 172

Query: 168 ELGRFGIRVNCVSPYAVSTPLAKD 191
           E+   G+ V       + T L +D
Sbjct: 173 EVAHHGVTVGSAYLSWIDTDLVRD 196

Length = 296

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 85.2 bits (211), Expect = 9e-20
 Identities = 78/259 (30%), Positives = 113/259 (43%), Gaps = 43/259 (16%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHC 71
           KV +ITG +RGIG  TA L ++ G  V +  +++ D  E+V + I      A     V  
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALA---VAA 59

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           DV  E D+         + G+LD + NNAG + E +  +   D A   RI + N+VG+FL
Sbjct: 60  DVADEADVLRLFEAVDRELGRLDALVNNAGIL-EAQMRLEQMDAARLTRIFATNVVGSFL 118

Query: 132 G-----RNMLL---GVCGIIGGAATHA-----------YTSSKHGL----LGLMKNTAVE 168
                 + M     G  G I   ++ A           Y +SK  +    +GL K  A E
Sbjct: 119 CAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAE 178

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-----EPEDAAEAALY 223
               GIRVN V P  + T +       A  G  G    +K  +        E+ A A L+
Sbjct: 179 ----GIRVNAVRPGVIYTEIH------ASGGEPGRVDRVKAGIPMGRGGTAEEVARAILW 228

Query: 224 LGSDESKCVSGHNLVVDGG 242
           L SDE+   +G  + V GG
Sbjct: 229 LLSDEASYTTGTFIDVSGG 247

Length = 248

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 85.3 bits (211), Expect = 9e-20
 Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 37/241 (15%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV---CKDIGSSSSSASG 65
           R +G+VAL+TG + GIG   AR   +HG KV+    + D  E++   C+  G  +     
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFP-- 60

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPN-ILDNDQAEFERILSI 124
                CD++ E+ I +  +   TQ+  +D+  NNAG     +P  +L      ++ +  +
Sbjct: 61  ---YQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGL---ARPEPLLSGKTEGWKEMFDV 114

Query: 125 NLVGAFL----------GRNMLLG-------VCG--IIGGAATHAYTSSKHGLLGLMKNT 165
           N++   +           RN+  G       + G  +   +  H Y ++KH +  L +  
Sbjct: 115 NVLALSICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGL 174

Query: 166 AVELGRFG---IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL 222
             EL R     IR   +SP  V T  A        +     Y ++    L+PED A A L
Sbjct: 175 RQEL-REAKTHIRATSISPGLVETEFAFKLHDNDPEKAAATYESIP--CLKPEDVANAVL 231

Query: 223 Y 223
           Y
Sbjct: 232 Y 232

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 84.8 bits (210), Expect = 1e-19
 Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 24/185 (12%)

Query: 11  QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV- 69
             +VA++ GG + +GE      ++ G  V +ADI  +  E V  +I    ++  G     
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEI----NAEYGEKAYG 56

Query: 70  -HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              D T E+ +          + ++D++  +AG     K  I D +  +F+R L +NLVG
Sbjct: 57  FGADATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAK--ITDFELGDFDRSLQVNLVG 114

Query: 129 AFL-----GRNMLL-GVCGII----------GGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            FL      + M+  G+ G I          G      Y+++K G +GL ++ A++L   
Sbjct: 115 YFLCAREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEH 174

Query: 173 GIRVN 177
           GI VN
Sbjct: 175 GITVN 179

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 84.8 bits (210), Expect = 1e-19
 Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 26/250 (10%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIGSSSSSASGCSY 68
           L+ KV ++TG  RGIG   A   +K G+ V++ A  + +      K +  +     G   
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIG--- 60

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  DV+  +  E      + +YG  DI+ NNAG +    P  L+ D    ++ +S +   
Sbjct: 61  VLADVSTREGCETLAKATIDRYGVADILVNNAG-LGLFSP-FLNVDDKLIDKHISTDFKS 118

Query: 129 AF-----LGRNMLLG--------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
                  L + M  G        V GI        Y + K  ++ L K  A+EL    IR
Sbjct: 119 VIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP-KIR 177

Query: 176 VNCVSPYAVSTPLAK---DFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV 232
           VN ++P  V T L +     L +++      ++ L G +L+PE+ AE    +   ES  +
Sbjct: 178 VNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFT-LMGKILDPEEVAEFVAAILKIES--I 234

Query: 233 SGHNLVVDGG 242
           +G   V+D G
Sbjct: 235 TGQVFVLDSG 244

Length = 252

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 84.4 bits (209), Expect = 1e-19
 Identities = 78/262 (29%), Positives = 115/262 (43%), Gaps = 53/262 (20%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKV---------LIADIKDDLG-ESVCKDIGSS 59
             GK AL+TG  +GIG  T +  +K GA+V         L + +++  G E VC D+   
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGIEPVCVDLSDW 64

Query: 60  SSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFE 119
                                 A   A+   G +D++ NNA  V  ++P  L+  +  F+
Sbjct: 65  D---------------------ATEEALGSVGPVDLLVNNAA-VAILQP-FLEVTKEAFD 101

Query: 120 RILSINLVGAF-----LGRNML-LGVCGIIGGAATHA----------YTSSKHGLLGLMK 163
           R   +N+         + R M+  GV G I   ++ A          Y S+K  L  L K
Sbjct: 102 RSFDVNVRAVIHVSQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTK 161

Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD-DGLGGMYSNLK-GAVLEPEDAAEAA 221
             A+ELG   IRVN V+P  V T + +D    +D +    M + +  G   E ED   A 
Sbjct: 162 VMALELGPHKIRVNSVNPTVVMTDMGRD--NWSDPEKAKKMLNRIPLGKFAEVEDVVNAI 219

Query: 222 LYLGSDESKCVSGHNLVVDGGF 243
           L+L SD+S   +G  L VDGGF
Sbjct: 220 LFLLSDKSSMTTGSTLPVDGGF 241

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 82.9 bits (205), Expect = 5e-19
 Identities = 66/253 (26%), Positives = 109/253 (43%), Gaps = 26/253 (10%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           + GK+ L+TGG+RGIG   A+ F + GA+V+I+  K +     C D     S+   C  +
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAE----ACADAAEELSAYGECIAI 59

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             D++ E+ IE  V     +  +LD++ NNAG        +    ++ +++++ IN+   
Sbjct: 60  PADLSSEEGIEALVARVAERSDRLDVLVNNAGAT--WGAPLEAFPESGWDKVMDINVKSV 117

Query: 130 FLGRNMLL-------------------GVCGIIG-GAATHAYTSSKHGLLGLMKNTAVEL 169
           F     LL                    + GI+  G   ++Y +SK  +  L +  A EL
Sbjct: 118 FFLTQALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKEL 177

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES 229
               I VN ++P    + +    L           S   G    PED A  A+ L S   
Sbjct: 178 AGEHITVNAIAPGRFPSKMTAFLLNDPAALEAEEKSIPLGRWGRPEDMAGLAIMLASRAG 237

Query: 230 KCVSGHNLVVDGG 242
             ++G  + VDGG
Sbjct: 238 AYLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 81.9 bits (203), Expect = 7e-19
 Identities = 66/233 (28%), Positives = 91/233 (39%), Gaps = 51/233 (21%)

Query: 13  KVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCS--YV 69
           KVAL+TG  RGIG    R  +K G   V++     + G++  + +      A G S  + 
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKL-----RAEGLSVRFH 55

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG- 128
             DVT +  IE A +    +YG LDI+ NNAG   +   +     + +    +  N  G 
Sbjct: 56  QLDVTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDD-STPTREQARETMKTNFFGT 114

Query: 129 -----AFL--------GR--NM--LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
                A L        GR  N+   LG         T AY  SK  L  L +  A EL  
Sbjct: 115 VDVTQALLPLLKKSPAGRIVNVSSGLGSL-------TSAYGVSKAALNALTRILAKELKE 167

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL 224
            GI+VN   P  V T +                     A   PE+ AE  +YL
Sbjct: 168 TGIKVNACCPGWVKTDMGG-----------------GKAPKTPEEGAETPVYL 203

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 82.4 bits (204), Expect = 7e-19
 Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 39/234 (16%)

Query: 14  VALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESV--CKDIGSSSSSASGCSYVH 70
           V +ITG + GIG  TA  F++ GAK VL A   + L E     +++G  + +      V 
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIA------VV 55

Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF 130
            DV     +E A +TAV ++G++D   NNAG    V     D    EF R+  +N +G  
Sbjct: 56  ADVADAAQVERAADTAVERFGRIDTWVNNAGV--AVFGRFEDVTPEEFRRVFDVNYLGHV 113

Query: 131 LG-----RNMLLGVCGII---GGAATH-------AYTSSKHGLLGLMKNTAVELGRFG-- 173
            G      ++     G +   G    +       AY++SKH + G  ++   EL   G  
Sbjct: 114 YGTLAALPHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAP 173

Query: 174 IRVNCVSPYAVSTPL---AKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL 224
           I V  V P A++TP    A+ ++        G        + +PE  AEA +  
Sbjct: 174 ISVTLVQPTAMNTPFFGHARSYM--------GKKPKPPPPIYQPERVAEAIVRA 219

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 83.0 bits (206), Expect = 1e-18
 Identities = 69/245 (28%), Positives = 111/245 (45%), Gaps = 45/245 (18%)

Query: 5   LMLRRLQGKVALITGGARGIGECTARLFSKHGAKV-LIADIKDDLGESVCKDIGSSSSSA 63
           +ML+ +  +V +ITG + G+G  TAR F++ GAKV L+A  ++ L E++  +I ++   A
Sbjct: 1   MMLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGL-EALAAEIRAAGGEA 59

Query: 64  SGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNA-----GTVDEVKPNILDNDQAEF 118
                V  DV   + ++ A + A  + G +D   NNA     G  ++V P        EF
Sbjct: 60  ---LAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTP-------EEF 109

Query: 119 ERILSINLVGAFLG-----RNMLLGVCGII---GGAATH-------AYTSSKHGLLGLMK 163
            R+  +  +G   G     R+M     G I   G A  +       AY ++KH + G   
Sbjct: 110 RRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTD 169

Query: 164 NTAVEL--GRFGIRVNCVSPYAVSTPL---AKDFLKLADDGLGGMYSNLKGAVLEPEDAA 218
           +   EL      + V  V P AV+TP    A+  L +    +  +Y        +PE  A
Sbjct: 170 SLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVEPQPVPPIY--------QPEVVA 221

Query: 219 EAALY 223
           +A LY
Sbjct: 222 DAILY 226

Length = 334

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 81.0 bits (200), Expect = 2e-18
 Identities = 66/225 (29%), Positives = 92/225 (40%), Gaps = 29/225 (12%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           K   ITG A GIG  TA LF+++G  V + DI +D   ++  ++G     A        D
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELG-----AENVVAGALD 55

Query: 73  VTKEKDIENAVNT-AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           VT       A+   A    G+LD +FNNAG V    P   D   A  +R++ IN+ G   
Sbjct: 56  VTDRAAWAAALADFAAATGGRLDALFNNAG-VGRGGP-FEDVPLAAHDRMVDINVKGVLN 113

Query: 132 G------------RNMLLGVC---GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV 176
           G               ++       I G      Y+++K  + GL +   VE  R GIRV
Sbjct: 114 GAYAALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRV 173

Query: 177 NCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAA 221
             V P+ V TP+       A    G       G VL   D A+  
Sbjct: 174 ADVWPWFVDTPILTKGETGAAPKKGL------GRVLPVSDVAKVV 212

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 81.8 bits (202), Expect = 2e-18
 Identities = 73/272 (26%), Positives = 109/272 (40%), Gaps = 57/272 (20%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M    Q +  L+TGG  GIG+  A      GA V+I     D   +  ++I +   + + 
Sbjct: 1   MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGA- 59

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             Y   DVT E  +  AV+ A   +G+L  + + AG  + + P I   D   + R + +N
Sbjct: 60  VRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGP-ITQIDSDAWRRTVDLN 118

Query: 126 LVGAFL-----GRNMLLG----VCGI--IGGAATH----AYTSSKHGLLGLMKNTAVELG 170
           + G         R ++ G      GI  I  + TH    AY  +K  +  LMK  A ELG
Sbjct: 119 VNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELG 178

Query: 171 RFGIRVNCVSP--------------------YAVSTPLAKDFLKLADDGLGGMYSNLKGA 210
              +RVN + P                    Y   TPL +                    
Sbjct: 179 PSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPR-------------------- 218

Query: 211 VLEPEDAAEAALYLGSDESKCVSGHNLVVDGG 242
           V E ED A  A++L SD +  ++G  + VDGG
Sbjct: 219 VGEVEDVANLAMFLLSDAASWITGQVINVDGG 250

Length = 276

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 80.5 bits (199), Expect = 3e-18
 Identities = 59/227 (25%), Positives = 93/227 (40%), Gaps = 32/227 (14%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           KVAL+TG +RGIG   AR  ++ G +V        LG    +D+ + S+S      V  D
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVS-------LGLRNPEDLAALSASGGDVEAVPYD 53

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL- 131
               +D    V+    ++G++D++ +NAG        + +   AE E   SIN++     
Sbjct: 54  ARDPEDARALVDALRDRFGRIDVLVHNAGIGRPTT--LREGSDAELEAHFSINVIAPAEL 111

Query: 132 -------------GRNMLL-GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVN 177
                        GR + L  + G    A    Y++SK  L  L      E    G+RV+
Sbjct: 112 TRALLPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVS 171

Query: 178 CVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL 224
            V P  V TP+A     L   G           +++P+D A     +
Sbjct: 172 AVCPGFVDTPMA---QGLTLVGAFPP-----EEMIQPKDIANLVRMV 210

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 80.8 bits (200), Expect = 3e-18
 Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 32/258 (12%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
            VAL+TGG RGIG   AR  +  G  + I D  DD  E +        +      +   D
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDD--EELAATQQELRALGVEVIFFPAD 60

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF-- 130
           V      E  ++ A   +G++D + NNAG   +V+ ++LD     F+R+L+INL G F  
Sbjct: 61  VADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFL 120

Query: 131 ---LGRNMLLG----------VCGIIGGAATHA------YTSSKHGLLGLMKNTAVELGR 171
              + + ML            +  +    A         Y  SK GL    +  A  L  
Sbjct: 121 TQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAE 180

Query: 172 FGIRVNCVSPYAVST----PLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD 227
            GI V  V P  + T    P+   +  L   GL  M         EPED A A   L S 
Sbjct: 181 EGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPM-----PRWGEPEDVARAVAALASG 235

Query: 228 ESKCVSGHNLVVDGGFAI 245
           +    +G  + VDGG +I
Sbjct: 236 DLPYSTGQAIHVDGGLSI 253

Length = 256

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 83.0 bits (206), Expect = 3e-18
 Identities = 76/254 (29%), Positives = 114/254 (44%), Gaps = 49/254 (19%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI---KDDLGESVCKDIGSSSSSAS 64
           R L GKVAL+TG ARGIG   A + ++ GA V+  D+    + L  +V   +G ++    
Sbjct: 206 RPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEAL-AAVANRVGGTA---- 260

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILS 123
               +  D+T              ++G LDI+ +NAG T D+   N+   D+A ++ +L+
Sbjct: 261 ----LALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANM---DEARWDSVLA 313

Query: 124 INLVG------AFLGRNMLLG----VC-----GIIGGAATHAYTSSKHGLLGLMKNTAVE 168
           +NL+       A L    L      V      GI G      Y +SK G++GL++  A  
Sbjct: 314 VNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPL 373

Query: 169 LGRFGIRVNCVSPYAVST------PLAKDFLKLADDGLGG--MYSNLKGAVLEPEDAAEA 220
           L   GI +N V+P  + T      P A    + A     G  M S  +G    P D AE 
Sbjct: 374 LAERGITINAVAPGFIETQMTAAIPFA---TREA-----GRRMNSLQQGG--LPVDVAET 423

Query: 221 ALYLGSDESKCVSG 234
             +L S  S  V+G
Sbjct: 424 IAWLASPASGGVTG 437

Length = 450

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 80.2 bits (198), Expect = 6e-18
 Identities = 71/252 (28%), Positives = 109/252 (43%), Gaps = 26/252 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL  +VA++TG  RG+G   A  F++ GA VLIA   +   + V + I ++   A     
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRA---HV 63

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPN-ILDNDQAEFERILSINLV 127
           V  D+   +        AV  +G+LDI+ NN G      PN +L     +     + N+ 
Sbjct: 64  VAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGG---TMPNPLLSTSTKDLADAFTFNVA 120

Query: 128 GAF-LGR----NML-----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
            A  L       ML               G + G    AY ++K  L    +  A++L  
Sbjct: 121 TAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCP 180

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESK 230
             IRVN ++P ++ T  A + +   D+    M        + +PED A AA+YL S    
Sbjct: 181 -RIRVNAIAPGSILTS-ALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGS 238

Query: 231 CVSGHNLVVDGG 242
            ++G  L VDGG
Sbjct: 239 YLTGKTLEVDGG 250

Length = 263

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 79.7 bits (197), Expect = 6e-18
 Identities = 67/257 (26%), Positives = 104/257 (40%), Gaps = 38/257 (14%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIA---------DIKDDLGESVCKDIGSSS 60
           L GKVA +TG +RGIG   A   +K GA V++A              L  ++ +      
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 61  SSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFER 120
           ++      +  DV  E  +   V   V Q+G+LDI+ NNAG +      + D     F+ 
Sbjct: 61  AAGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWL--SLVEDTPAKRFDL 118

Query: 121 ILSINLVGAFL--------------GRNMLLGVCGIIGGAATH-AYTSSKHGLLGLMKNT 165
           +  +NL G +L              G  + +     +  A    AY + K G+  L    
Sbjct: 119 MQRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGL 178

Query: 166 AVELGRFGIRVNCVSP-YAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL 224
           A EL R GI VN + P  A+ TP A +    +D                PE  ++A L +
Sbjct: 179 AAELRRHGIAVNSLWPSTAIETPAATELSGGSDPARAR----------SPEILSDAVLAI 228

Query: 225 GSDESKCVSGHNLVVDG 241
            S  +   +G  +V+D 
Sbjct: 229 LSRPAAERTG-LVVIDE 244

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 78.8 bits (195), Expect = 2e-17
 Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 37/261 (14%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+GKV +++G   G+G   A   ++ GA V++A    +  + V  +I            V
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRR---ALAV 59

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             D+T E    N V  A+ ++G++D + NNA  V  +KP + D D A +  ++ +N++G 
Sbjct: 60  PTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKP-LADADFAHWRAVIELNVLGT 118

Query: 130 FLGRNMLL----------GVCGIIGGAATH-------AYTSSKHGLLGLMKNTAVELGRF 172
                +            G   +I             AY  +K  LL   ++ A ELG  
Sbjct: 119 L---RLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQ 175

Query: 173 GIRVNCVSP-YAVSTPLAKDFLKLADDGLGGM-----YSNLK-----GAVLEPEDAAEAA 221
           GIRVN V+P Y    PL   F   A  G  G+     Y+          +   ++ A A 
Sbjct: 176 GIRVNSVAPGYIWGDPLKGYFRHQA--GKYGVTVEQIYAETAANSDLKRLPTDDEVASAV 233

Query: 222 LYLGSDESKCVSGHNLVVDGG 242
           L+L SD ++ ++G  L V+ G
Sbjct: 234 LFLASDLARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 78.0 bits (192), Expect = 4e-17
 Identities = 73/261 (27%), Positives = 125/261 (47%), Gaps = 45/261 (17%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS-- 67
           L GKVA+ITG   G+G+  A   +K GA ++   + +            +   A G    
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE-------APETQAQVEALGRKFH 58

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN-- 125
           ++  D+ ++KDI++ V+ AV   G +DI+ NNAG +   + ++L+    +++ +++IN  
Sbjct: 59  FITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIR--RQDLLEFGNKDWDDVININQK 116

Query: 126 ----LVGAFLGRNMLLGVCGII----------GGAATHAYTSSKHGLLGLMKNTAVELGR 171
               L  A   + +  G  G I          GG    +YT+SK  ++GL +  A EL +
Sbjct: 117 TVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQ 176

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE---------PEDAAEAAL 222
           + I VN ++P  ++T    +   L  D      +    A+LE         P+D A  A+
Sbjct: 177 YNINVNAIAPGYMAT---DNTAALRAD------TARNEAILERIPASRWGTPDDLAGPAI 227

Query: 223 YLGSDESKCVSGHNLVVDGGF 243
           +L S  S  V+G+ L VDGG+
Sbjct: 228 FLSSSASDYVTGYTLAVDGGW 248

Length = 251

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 77.0 bits (190), Expect = 9e-17
 Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 30/197 (15%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           K   +TG A GIG  TA   +  GA++ + D   D       D  +   +     +   D
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVP--EHRALD 58

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERILSINLV 127
           ++    +          +G +D++ N AG     TVD      L ++Q  + R++ +NL+
Sbjct: 59  ISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDR-----LTHEQ--WRRMVDVNLM 111

Query: 128 G------AFL------GR-NMLLGV---CGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           G       F+      GR   L+ V    G++      AY++SK GL GL +    +L R
Sbjct: 112 GPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLAR 171

Query: 172 FGIRVNCVSPYAVSTPL 188
            GI V+ V P AV TPL
Sbjct: 172 HGIGVSVVVPGAVKTPL 188

Length = 272

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 78.9 bits (195), Expect = 1e-16
 Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 23/200 (11%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
               GK+ ++TG   GIG  TA  F++ GA+V+ +DI +   E   + I ++ + A   +
Sbjct: 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAH--A 368

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
           Y   DV+    +E        ++G  DI+ NNAG    +    LD    +++R+L +NL 
Sbjct: 369 YR-VDVSDADAMEAFAEWVRAEHGVPDIVVNNAGI--GMAGGFLDTSAEDWDRVLDVNLW 425

Query: 128 G------AFLGRNML-LGVCGII---GGAATH-------AYTSSKHGLLGLMKNTAVELG 170
           G       F GR M+  G  G I     AA +       AY +SK  +L L +    EL 
Sbjct: 426 GVIHGCRLF-GRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELA 484

Query: 171 RFGIRVNCVSPYAVSTPLAK 190
             GI V  + P  V T +  
Sbjct: 485 AAGIGVTAICPGFVDTNIVA 504

Length = 582

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 75.6 bits (186), Expect = 3e-16
 Identities = 73/262 (27%), Positives = 116/262 (44%), Gaps = 48/262 (18%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L G+ AL+TG ++GIG   A   ++ GA+V++         +  + +     SA   ++ 
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAF- 66

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-FERILSINL-- 126
             DVT    +  A++    + G +DI+ NNAG +    P  L++  A+ FER+L  N+  
Sbjct: 67  --DVTDHDAVRAAIDAFEAEIGPIDILVNNAG-MQFRTP--LEDFPADAFERLLRTNISS 121

Query: 127 ---VGAFLGRNML-LGVCGIIGGAATHA---------YTSSKHGLLGLMKNTAVELGRFG 173
              VG  + R+M+  G   II  A+  +         YT++K  +  L K  A +  + G
Sbjct: 122 VFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHG 181

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADD-------------GLGGMYSNLKGAVLEPEDAAEA 220
           ++ N ++P    TPL      L  D             G  G    L G          A
Sbjct: 182 LQCNAIAPGYFDTPLNA---ALVADPEFSAWLEKRTPAGRWGKVEELVG----------A 228

Query: 221 ALYLGSDESKCVSGHNLVVDGG 242
            ++L SD S  V+GH L VDGG
Sbjct: 229 CVFLASDASSFVNGHVLYVDGG 250

Length = 255

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.0 bits (187), Expect = 3e-16
 Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 37/266 (13%)

Query: 1   MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-GESVCKDIGSS 59
                    L GKVA++TG A G+G   A   ++ GA V++ D+   L    V  +I ++
Sbjct: 1   SPRTTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA 60

Query: 60  SSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEF 118
            + A     V  D+++    +  V TAV   G LDI+ NNAG T D +  N+ D    E+
Sbjct: 61  GAKA---VAVAGDISQRATADELVATAV-GLGGLDIVVNNAGITRDRMLFNMSDE---EW 113

Query: 119 ERILSINLVGAFL---------------------GRNM-LLGVCGIIGGAATHAYTSSKH 156
           + +++++L G FL                     GR +      G++G      Y ++K 
Sbjct: 114 DAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKA 173

Query: 157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPED 216
           G+  L  + A  LGR+G+R N + P A +   A  F    D   GG+        L PE 
Sbjct: 174 GITALTLSAARALGRYGVRANAICPRARTAMTADVFGDAPDVEAGGIDP------LSPEH 227

Query: 217 AAEAALYLGSDESKCVSGHNLVVDGG 242
                 +L S  +  V+G   +V G 
Sbjct: 228 VVPLVQFLASPAAAEVNGQVFIVYGP 253

Length = 306

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 75.0 bits (184), Expect = 5e-16
 Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 33/256 (12%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L G+ AL+TG + GIGE  ARL    GA V +   + +  E++  ++G            
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGER------VKIF 57

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVG 128
             +++   +++     A      +DI+ NNAG T D +   + D D   ++ +L +NL  
Sbjct: 58  PANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDED---WDSVLEVNLTA 114

Query: 129 AF-LGRNM--------------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F L R +              +  V G+ G      Y +SK G++G  K+ A E+    
Sbjct: 115 TFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRN 174

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGG---MYSNLKGAVLEPEDAAEAALYLGSDESK 230
           + VNCV+P  + + +         + + G   M     GA     + A A  YL S E+ 
Sbjct: 175 VTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGA-----EVASAVAYLASSEAA 229

Query: 231 CVSGHNLVVDGGFAIV 246
            V+G  + V+GG A++
Sbjct: 230 YVTGQTIHVNGGMAMI 245

Length = 245

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 74.8 bits (184), Expect = 5e-16
 Identities = 77/255 (30%), Positives = 110/255 (43%), Gaps = 35/255 (13%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG-CSYVHC 71
           KV LITG +RGIG  TA L +  G  V I   +D    +  ++   +  +A G    V  
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARD---AAAAEETADAVRAAGGRACVVAG 59

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           DV  E D+    +   + +G+LD + NNAG V    P + D D A   R+   N++GA+L
Sbjct: 60  DVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMP-LADMDAARLRRMFDTNVLGAYL 118

Query: 132 -----GRNMLL---GVCGIIGGAATHA-----------YTSSKHGLLGLMKNTAVELGRF 172
                 R +     G  G I   ++ A           Y  SK  +  L    A ELG  
Sbjct: 119 CAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPH 178

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-----EPEDAAEAALYLGSD 227
           G+RVN V P  + T +       A  G  G  + L          E ++ AE  ++L SD
Sbjct: 179 GVRVNAVRPGLIETEIH------ASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSD 232

Query: 228 ESKCVSGHNLVVDGG 242
            +  V+G  L V GG
Sbjct: 233 AASYVTGALLDVGGG 247

Length = 248

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 74.5 bits (184), Expect = 6e-16
 Identities = 69/262 (26%), Positives = 109/262 (41%), Gaps = 40/262 (15%)

Query: 12  GKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           GK  LITG A  R I    A+   + GA++          E++ K +   +      + V
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTY----QPEALRKRVEKLAERLGESALV 56

Query: 70  -HCDVTKEKDIENAVNTAVTQYGKLDIMFN---NAGTVDEVKPNILDNDQAEFERILSIN 125
             CDV+ +++I+         +GKLD + +    A  V    P  LD  +  F + L I+
Sbjct: 57  LPCDVSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGP-FLDTSRKGFLKALDIS 115

Query: 126 ------LVGAFLGRNM-----LLGVCGIIGGAATHAY---TSSKHGLLGLMKNTAVELGR 171
                 L  A L   M     ++ +  +        Y     +K  L   ++  A ELGR
Sbjct: 116 AYSLVSLAKAAL-PIMNPGGSIVTLSYLGSERVVPGYNVMGVAKAALESSVRYLAYELGR 174

Query: 172 FGIRVNCVSPYAVSTPLA----KDFLKLADDGLGGMYSNLK---GAVLEPEDAAEAALYL 224
            GIRVN +S   + T LA      F K+ +      YS  +   G  +  E+    A +L
Sbjct: 175 KGIRVNAISAGPIKT-LAASGITGFDKMLE------YSEQRAPLGRNVTAEEVGNTAAFL 227

Query: 225 GSDESKCVSGHNLVVDGGFAIV 246
            SD S  ++G  + VDGG+ I+
Sbjct: 228 LSDLSSGITGEIIYVDGGYHIM 249

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 74.4 bits (183), Expect = 8e-16
 Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 38/261 (14%)

Query: 14  VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDV 73
           VA++TG +RGIG   A   +  G  + I D+ DD  +   + +    ++     Y   D+
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDD--DQATEVVAEVLAAGRRAIYFQADI 60

Query: 74  TKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL-- 131
            +  D E  ++ A   +G+LD + NNAG     + ++LD  +  F+R+++INL G F   
Sbjct: 61  GELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLT 120

Query: 132 ---GRNML-------------LGVCGIIGGAAT---HAYTSSKHGLLGLMKNTAVELGRF 172
               R M+             + V  I     +     Y  SK GL    +  A  L   
Sbjct: 121 QAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADE 180

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-------EPEDAAEAALYLG 225
           GI V+ + P  + T +           +   Y  L  A L       +PED A+A   L 
Sbjct: 181 GIAVHEIRPGLIHTDMTAP--------VKEKYDELIAAGLVPIRRWGQPEDIAKAVRTLA 232

Query: 226 SDESKCVSGHNLVVDGGFAIV 246
           S      +G  + +DGG ++ 
Sbjct: 233 SGLLPYSTGQPINIDGGLSMR 253

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 70/257 (27%), Positives = 103/257 (40%), Gaps = 47/257 (18%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVH- 70
           GKV +ITG   GIG+ TAR  +K GA V+IA   ++ GE    +I       +G + V  
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIK----KETGNAKVEV 56

Query: 71  --CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              D++    +       + ++ +LDI+ NNAG +    P  L  D   FE   ++N +G
Sbjct: 57  IQLDLSSLASVRQFAEEFLARFPRLDILINNAGIM--APPRRLTKDG--FELQFAVNYLG 112

Query: 129 AFLGRNMLLGV---CG----IIGGAATH----------------------AYTSSKHGLL 159
            FL  N+LL V         +   +  H                      AY  SK   +
Sbjct: 113 HFLLTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANI 172

Query: 160 GLMKNTAVELGRFGIRVNCVSPYAVSTPL-AKDFLKLADDGLGGMYSNLKGAVLEPEDAA 218
              +  A  L   G+ VN + P  V T L  ++        L   +         PE  A
Sbjct: 173 LFTRELARRLEGTGVTVNALHPGVVRTELLRRNGSFFLLYKLLRPFLK-----KSPEQGA 227

Query: 219 EAALYLG-SDESKCVSG 234
           + ALY   S E + VSG
Sbjct: 228 QTALYAATSPELEGVSG 244

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 73.8 bits (182), Expect = 2e-15
 Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 38/198 (19%)

Query: 11  QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVH 70
             KVAL+TG + GIG  TA   ++ G +V         G S  ++   ++    G   + 
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVF--------GTS--RNPARAAPIP-GVELLE 51

Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGT-----VDEVKPNILDNDQAEFERILSIN 125
            DVT +  ++ AV+  + + G++D++ NNAG       +E          A+ + +   N
Sbjct: 52  LDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSI-------AQAQALFDTN 104

Query: 126 LVG------AFL--------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           + G      A L        GR + +  V G +       Y +SKH + G  ++   E+ 
Sbjct: 105 VFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVR 164

Query: 171 RFGIRVNCVSPYAVSTPL 188
           +FGIRV+ V P    T  
Sbjct: 165 QFGIRVSLVEPAYTKTNF 182

Length = 270

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 73.0 bits (179), Expect = 2e-15
 Identities = 61/246 (24%), Positives = 97/246 (39%), Gaps = 32/246 (13%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI---GSSSSSASGC 66
           L  ++ L+TG + GIG   A  ++++GA V++    ++    V   I   G         
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
             + C  T E   + A   AV  Y +LD + +NAG + +V P    N Q  ++ +  +N+
Sbjct: 62  DLLTC--TSENCQQLAQRIAV-NYPRLDGVLHNAGLLGDVCPLSEQNPQ-VWQDVXQVNV 117

Query: 127 VGAFLGRNMLLGVC---------------GIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
              F+    LL +                G  G A   AY  SK    GL +  A E  +
Sbjct: 118 NATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQ 177

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC 231
             +RVNC++P    T +        D         LK     P D     L+L  D+S+ 
Sbjct: 178 RNLRVNCINPGGTRTAMRASAFPTEDP------QKLK----TPADIMPLYLWLMGDDSRR 227

Query: 232 VSGHNL 237
            +G   
Sbjct: 228 KTGMTF 233

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 73.7 bits (181), Expect = 2e-15
 Identities = 75/262 (28%), Positives = 106/262 (40%), Gaps = 45/262 (17%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD---DLGESV--CKDIGSSSSSA 63
           RLQG+ ALITG   GIG  TA  F++ GA + +  + +   D  E V   +  G  + + 
Sbjct: 52  RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVAL 111

Query: 64  SGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILS 123
            G      D+  E      V  AV + G LDI+ N AG    VK +I D    +F+    
Sbjct: 112 PG------DLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVK-DIADITTEQFDATFK 164

Query: 124 INLVGAF----LGRNMLLGVCGIIGGAATHA---------YTSSKHGLLGLMKNTAVELG 170
            N+   F         L     II   +  +         Y S+K  ++   K  A ++ 
Sbjct: 165 TNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVA 224

Query: 171 RFGIRVNCVSPYAVSTPLA----------KDFLKLADDGLGGMYSNLKGAVLEPEDAAEA 220
             GIRVN V+P  V TPL            DF         G  + +K    +P + A  
Sbjct: 225 EKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDF---------GSETPMKRPG-QPVEMAPL 274

Query: 221 ALYLGSDESKCVSGHNLVVDGG 242
            + L S ES  V+G    V GG
Sbjct: 275 YVLLASQESSYVTGEVFGVTGG 296

Length = 300

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 73.2 bits (180), Expect = 2e-15
 Identities = 67/256 (26%), Positives = 118/256 (46%), Gaps = 37/256 (14%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
            KV +ITGG+ G+G+  A+ F++ GA V+I     +  E    +I            V  
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVL---TVQM 57

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERILSINL 126
           DV   +D++  V     ++G++D + NNA        +++  N        +  ++ I L
Sbjct: 58  DVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVN-------GWNSVIDIVL 110

Query: 127 VGAF-----LGR----NMLLGVCGIIGGAATHAYT---------SSKHGLLGLMKNTAVE 168
            G F     +G+      + G   II   AT+A+          ++K G+L + +  AVE
Sbjct: 111 NGTFYCSQAVGKYWIEKGIKGN--IINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVE 168

Query: 169 LGR-FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGS 226
            GR +GIRVN ++P  +      D L  +++       ++  G +  PE+ A  A +L S
Sbjct: 169 WGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLS 228

Query: 227 DESKCVSGHNLVVDGG 242
           DE+  ++G  + +DGG
Sbjct: 229 DEAAYINGTCITMDGG 244

Length = 252

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 72.5 bits (178), Expect = 3e-15
 Identities = 59/249 (23%), Positives = 109/249 (43%), Gaps = 29/249 (11%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY--VH 70
           ++AL+TGG  GIG    +  +K G +V      +        +       A G  +  V 
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRV----AANCGPNEERAEAWLQEQGALGFDFRVVE 56

Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGA 129
            DV+  +  + AV     + G +D++ NNAG T D     +      ++  ++  NL   
Sbjct: 57  GDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKM---TYEQWSAVIDTNLNSV 113

Query: 130 F-LGRNMLLGVC--------------GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F + + ++ G+               G  G      Y+++K G++G  K  A E    G+
Sbjct: 114 FNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGV 173

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKCVS 233
            VN +SP  ++T +      + +D L  + + +  G +  PE+ A A  +L S+E+  ++
Sbjct: 174 TVNTISPGYIATDMVM---AMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYIT 230

Query: 234 GHNLVVDGG 242
           G  L ++GG
Sbjct: 231 GATLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 71.2 bits (174), Expect = 3e-15
 Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%)

Query: 5   LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSAS 64
           +M  +L GKVA++TGG  GIG  TA L +K GAKV++ DI  + G++  ++I +    A 
Sbjct: 9   VMKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEAL 68

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG--TVDEVKPNILDNDQAEFERIL 122
             SY   D+ K+ D +  ++  +  + ++D++F NAG   +D +     +ND      +L
Sbjct: 69  FVSY---DMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQENDS----NVL 121

Query: 123 SINLV 127
            IN V
Sbjct: 122 CINDV 126

Length = 169

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 72.3 bits (178), Expect = 4e-15
 Identities = 65/270 (24%), Positives = 113/270 (41%), Gaps = 48/270 (17%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
              GK  ++ GG  GI    A+ F++ GA V +A    +  ++    +  +     G S 
Sbjct: 6   DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSA 65

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERILS 123
              DV     +E A      ++G +D++ + A          +  N        F+ ++ 
Sbjct: 66  ---DVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSAN-------GFKTVVD 115

Query: 124 INLVGAFLGRNMLLGV--------CGIIGGAATHAYT---------SSKHGLLGLMKNTA 166
           I+L+G F   N+L             II  +A  A+          ++K G+  L +  A
Sbjct: 116 IDLLGTF---NVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLA 172

Query: 167 VELGRFGIRVNCVSPYAVSTPLA--KDFLKLADDGLGGMYSNLKGAVL-----EPEDAAE 219
           +E G  GIRVN + P     P+A  +   +LA      + + +  +V        +D A 
Sbjct: 173 LEWGPEGIRVNSIVP----GPIAGTEGMARLAPSP--ELQAAVAQSVPLKRNGTKQDIAN 226

Query: 220 AALYLGSDESKCVSGHNLVVDGGFAIVNAG 249
           AAL+L SD +  ++G  L VDGG+++  A 
Sbjct: 227 AALFLASDMASYITGVVLPVDGGWSLGGAS 256

Length = 264

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 72.0 bits (177), Expect = 5e-15
 Identities = 66/262 (25%), Positives = 106/262 (40%), Gaps = 36/262 (13%)

Query: 10  LQGKVALITGGAR--GIGECTARLFSKHGAKV-----------LIADIKDDLGESVCKDI 56
           L  K+AL+TG +R  GIG    R  +  G  +           +   + D     + ++I
Sbjct: 3   LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62

Query: 57  GSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNA-----GTVDEVKPNIL 111
            S       C ++  D+++             + G   I+ NNA       ++E+    L
Sbjct: 63  ESYGVR---CEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQL 119

Query: 112 DNDQAEFERILSINLVGAFL--------GRNMLLGVCGIIGGAATH-AYTSSKHGLLGLM 162
           D   A   R  ++ L  AF         GR + L     +G      AY ++K  +    
Sbjct: 120 DKHYAVNVRA-TMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEAFT 178

Query: 163 KNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL 222
           K+ A EL   GI VN V+P    T    + LK     L   +   +G V EP DAA    
Sbjct: 179 KSLAPELAEKGITVNAVNPGPTDTGWITEELK---HHLVPKF--PQGRVGEPVDAARLIA 233

Query: 223 YLGSDESKCVSGHNLVVDGGFA 244
           +L S+E+K ++G  +  +GGF+
Sbjct: 234 FLVSEEAKWITGQVIHSEGGFS 255

Length = 256

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 71.9 bits (176), Expect = 7e-15
 Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 21/196 (10%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
           G+ A+ITGGA GIG  T   F++ GA+V++ D+           + +      G   V C
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHG---VMC 62

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG--- 128
           DV   +++ +  + A    G +D++F+NAG V  V   I++    ++  ++ ++L G   
Sbjct: 63  DVRHREEVTHLADEAFRLLGHVDVVFSNAGIV--VGGPIVEMTHDDWRWVIDVDLWGSIH 120

Query: 129 ---AFLGRNMLLGV----------CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
              AFL R +  G            G++  A   AY  +K+G++GL +  A E+   GI 
Sbjct: 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180

Query: 176 VNCVSPYAVSTPLAKD 191
           V+ + P  V T L  +
Sbjct: 181 VSVLCPMVVETNLVAN 196

Length = 275

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 71.2 bits (175), Expect = 9e-15
 Identities = 59/259 (22%), Positives = 97/259 (37%), Gaps = 54/259 (20%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLI---------ADIKDDLGESVCKDIGSSSSSA 63
            VAL+TG A+ IG   A   +  G +V++           +KD+L           ++  
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDEL-----------NALR 49

Query: 64  SGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILS 123
           +    V  D++      + V  A   +G+ D++ NNA         +    +  +  +  
Sbjct: 50  NSAVLVQADLSDFAACADLVAAAFRAFGRCDVLVNNASAF--YPTPLGQGSEDAWAELFG 107

Query: 124 IN------LVGAFLGRNMLLGVCGII--------GGAATH-AYTSSKHGLLGLMKNTAVE 168
           IN      L+ AF  R        II             + AY  SK  L GL ++ A+E
Sbjct: 108 INLKAPYLLIQAFARRLAGSRNGSIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALE 167

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-----EPEDAAEAALY 223
           L    IRVN ++P           + L +D       N    V        E+ A+A ++
Sbjct: 168 LAPN-IRVNGIAP---------GLILLPEDMDAEYRENALRKVPLKRRPSAEEIADAVIF 217

Query: 224 LGSDESKCVSGHNLVVDGG 242
           L       ++G  + VDGG
Sbjct: 218 LLDSNY--ITGQIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 70.7 bits (173), Expect = 2e-14
 Identities = 58/252 (23%), Positives = 115/252 (45%), Gaps = 27/252 (10%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+GKVA++TG   G+G+  A   ++ G  ++  +I +   E++ +       +A G  ++
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPT-ETIEQ------VTALGRRFL 60

Query: 70  H--CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
               D+ K   I   +  AV ++G +DI+ NNAG +   + + ++  + +++ ++++N+ 
Sbjct: 61  SLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIR--REDAIEFSEKDWDDVMNLNIK 118

Query: 128 GAFLGRNMLL------GVCGII----------GGAATHAYTSSKHGLLGLMKNTAVELGR 171
             F             G  G I          GG    +YT+SK G++G+ +  A E  +
Sbjct: 119 SVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAK 178

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC 231
             I VN ++P  ++T   +            +     G    P D     ++L S  S  
Sbjct: 179 HNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDY 238

Query: 232 VSGHNLVVDGGF 243
           ++G+ + VDGG+
Sbjct: 239 INGYTIAVDGGW 250

Length = 253

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 56/197 (28%), Positives = 83/197 (42%), Gaps = 24/197 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL+G+V L+TGGA G+G      F   GA+V + D      + +    G +     G   
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEG--- 58

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNI---LDNDQAEFERILSIN 125
              DV    D + AV   V  +GK+D +  NAG  D     +    D     F+ +  IN
Sbjct: 59  ---DVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHIN 115

Query: 126 LVGAFLGRNMLLGV--------------CGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           + G  L     L                 G         YT++KH ++GL+K  A EL  
Sbjct: 116 VKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAP 175

Query: 172 FGIRVNCVSPYAVSTPL 188
           + +RVN V+P  +S+ L
Sbjct: 176 Y-VRVNGVAPGGMSSDL 191

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 70.4 bits (173), Expect = 2e-14
 Identities = 71/268 (26%), Positives = 112/268 (41%), Gaps = 43/268 (16%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M +R  GKV ++TG A+GIG   A   +  GA+V++ D + +L   V  ++ ++   A  
Sbjct: 2   MNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVD-RSELVHEVAAELRAAGGEALA 60

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKP-------NILDNDQAEF 118
              +  D+      + A+  AV  +G++D++ NN G     KP        I    +AE 
Sbjct: 61  ---LTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQI----EAEI 113

Query: 119 ERILSINLVG--AFL------GRNMLLGVCGIIGGAATHA-----YTSSKHGLLGLMKNT 165
            R L   L    A L      G   ++ V  I    AT       Y+++K G+  L  + 
Sbjct: 114 RRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSI----ATRGINRVPYSAAKGGVNALTASL 169

Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG------LGGMY-----SNLKGAVLEP 214
           A E    GIRVN V+P     P  +     A            +      S+L       
Sbjct: 170 AFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTI 229

Query: 215 EDAAEAALYLGSDESKCVSGHNLVVDGG 242
           ++   A L+L SDE+  ++G  L V GG
Sbjct: 230 DEQVAAILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 70.2 bits (172), Expect = 3e-14
 Identities = 58/265 (21%), Positives = 92/265 (34%), Gaps = 57/265 (21%)

Query: 16  LITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK 75
           +ITG A GIG  TA L    G  V+  D+++                    + V  D++ 
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLRE--------------------ADVIADLST 42

Query: 76  EKDIENAVNTAVTQYGK-LDIMFNNAGT--------------------VDEVKPNILDND 114
            +    A+   + +    LD + N AG                     ++ + P +    
Sbjct: 43  PEGRAAAIADVLARCSGVLDGLVNCAGVGGTTVAGLVLKVNYFGLRALMEALLPRLRKGH 102

Query: 115 QAEFERILSI----------NLVGAFLGRNMLLGVCGIIGGAATH--AYTSSKHGL-LGL 161
                 + SI           L  A         V            AY  SK  L +  
Sbjct: 103 GPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSKEALTVWT 162

Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLAKDFL--KLADDGLGGMYSNLKGAVLEPEDAAE 219
            +  A  L   G+RVN V+P  V TP+ + FL      + +    + +     EP++ A 
Sbjct: 163 RRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFVTPMGRRA-EPDEIAP 221

Query: 220 AALYLGSDESKCVSGHNLVVDGGFA 244
              +L SD +  ++G NL VDGG  
Sbjct: 222 VIAFLASDAASWINGANLFVDGGLD 246

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 70.4 bits (173), Expect = 3e-14
 Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 5/126 (3%)

Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGC 66
           ++   GKVA+ITG A G G   AR+ +  G K+++AD++ D  +    ++ +  +   G 
Sbjct: 1   MKDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLG- 59

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
             V  DV+    +E   + A+ ++G + ++FNNAG V      + +N  A++E +L +NL
Sbjct: 60  --VRTDVSDAAQVEALADAALERFGAVHLLFNNAG-VGAGGL-VWENSLADWEWVLGVNL 115

Query: 127 VGAFLG 132
            G   G
Sbjct: 116 WGVIHG 121

Length = 287

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 70.0 bits (172), Expect = 3e-14
 Identities = 71/282 (25%), Positives = 106/282 (37%), Gaps = 92/282 (32%)

Query: 11  QGKVALITGGARGIGECTARLFSKHGAKVLI--------ADI-KDDLGESVCKDIGSSSS 61
             KVALITGGAR IG   AR     G +V I        AD    +L  ++        S
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAEL-NALRPG-----S 58

Query: 62  SASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNA--------GTVDEVKPNILDN 113
           +A+    +  D+     +   V   V  +G+LD + NNA        G++ E        
Sbjct: 59  AAA----LQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITE-------- 106

Query: 114 DQAEFERILSINLVGAFL----GRNMLLGVCG-IIGGAATHA---------YTSSKHGLL 159
             A+++ + + NL   F         L    G I+     HA         Y ++K  L 
Sbjct: 107 --AQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALE 164

Query: 160 GLMKNTAVELGRFGIRVNCVSPYAV-------------------STPLAKDFLKLADDGL 200
            L ++ A+EL    +RVN V+P A+                    TPL +          
Sbjct: 165 MLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKR---------- 213

Query: 201 GGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG 242
                     +  PED AEA  +L   ++  ++G  L VDGG
Sbjct: 214 ----------IGTPEDIAEAVRFL-LADASFITGQILAVDGG 244

Length = 249

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 70.4 bits (172), Expect = 3e-14
 Identities = 71/250 (28%), Positives = 109/250 (43%), Gaps = 21/250 (8%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL--GESVCKDIGSSSSSASGC 66
           RL+ + AL+TGG  GIG   A  +++ GA V I+ +  +    + V K I      A   
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKA--- 102

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
             +  D++ EK   + V+ A    G LDIM   AG    + P+I D    +F++  +IN+
Sbjct: 103 VLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAI-PDIADLTSEQFQKTFAINV 161

Query: 127 VGAFL----GRNMLLGVCGIIGGAATHAYTSSKH---------GLLGLMKNTAVELGRFG 173
              F        +L     II  ++  AY  S H          +L   +  A ++   G
Sbjct: 162 FALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKG 221

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADD-GLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV 232
           IRVN V+P  + T L     +  D     G  + +K A  +P + A   +YL S ES  V
Sbjct: 222 IRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAG-QPAELAPVYVYLASQESSYV 280

Query: 233 SGHNLVVDGG 242
           +     V GG
Sbjct: 281 TAEVHGVCGG 290

Length = 294

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 69.5 bits (171), Expect = 4e-14
 Identities = 64/256 (25%), Positives = 104/256 (40%), Gaps = 58/256 (22%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG------ESVCKDIGSSSSSA 63
           L+ ++ L+TG   GIG   A  +++HGA V++      LG      E+V  +I ++    
Sbjct: 10  LKDRIILVTGAGDGIGREAALTYARHGATVIL------LGRTEEKLEAVYDEIEAAGGPQ 63

Query: 64  --------SGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQ 115
                      +  +             +T   Q+G+LD + +NAG + E+ P +   D 
Sbjct: 64  PAIIPLDLLTATPQNYQ--------QLADTIEEQFGRLDGVLHNAGLLGELGP-MEQQDP 114

Query: 116 AEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAYTSSKHGLL 159
             ++ ++ +N+   F+    LL                 V G  G A   AY  SK    
Sbjct: 115 EVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSV-GRQGRANWGAYAVSKFATE 173

Query: 160 GLMKNTAVELGRFGIRVNCVSPYAVSTPL-AKDFLKLADDGLGGMYSNLKGAVLEPEDAA 218
           G+M+  A E     +RVNC++P    T + A  F    +D        LK     PED  
Sbjct: 174 GMMQVLADEYQGTNLRVNCINPGGTRTAMRASAF--PGEDPQ-----KLK----TPEDIM 222

Query: 219 EAALYLGSDESKCVSG 234
              LYL  D+S+  +G
Sbjct: 223 PLYLYLMGDDSRRKNG 238

Length = 247

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 69.0 bits (169), Expect = 5e-14
 Identities = 68/248 (27%), Positives = 95/248 (38%), Gaps = 30/248 (12%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
             GK  L+ GG+RGIG    R F   GA V           +  KD     +  +G + V
Sbjct: 4   FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFT-------YAGSKDAAERLAQETGATAV 56

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             D         AV   V + G LDI+  NAG         LD D  + +R+  IN+   
Sbjct: 57  QTDSADRD----AVIDVVRKSGALDILVVNAGIAVFGDALELDAD--DIDRLFKINIHAP 110

Query: 130 F-----LGRNMLLG----VCGIIGG-----AATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
           +       R M  G    + G + G     A   AY +SK  L G+ +  A + G  GI 
Sbjct: 111 YHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGIT 170

Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGH 235
           +N V P  + T        + D     M     G    PE+ A    +L   E+  V+G 
Sbjct: 171 INVVQPGPIDTDANPANGPMKDMMHSFMAIKRHG---RPEEVAGMVAWLAGPEASFVTGA 227

Query: 236 NLVVDGGF 243
              +DG F
Sbjct: 228 MHTIDGAF 235

Length = 237

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 68.2 bits (167), Expect = 1e-13
 Identities = 56/232 (24%), Positives = 90/232 (38%), Gaps = 36/232 (15%)

Query: 14  VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDV 73
           VA + G   G+G   AR F+  G  V +A  ++   E++  DI   +  ++    V  D 
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSA--KAVPTDA 58

Query: 74  TKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL-- 131
             E ++    +    + G L+++  NAG    V   IL+     FE++  +   G FL  
Sbjct: 59  RDEDEVIALFDLIEEEIGPLEVLVYNAGA--NVWFPILETTPRVFEKVWEMAAFGGFLAA 116

Query: 132 ---GRNMLLGVCGII----------GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV-- 176
               + ML    G I          G A   A+  +K  L  L ++ A ELG  GI V  
Sbjct: 117 REAAKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHVAH 176

Query: 177 ----NCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL 224
                 +    +     K   +  +DG+           L+P+  AEA   L
Sbjct: 177 VIIDGGIDTDFIRERFPKRDERKEEDGI-----------LDPDAIAEAYWQL 217

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 68.0 bits (167), Expect = 1e-13
 Identities = 70/266 (26%), Positives = 115/266 (43%), Gaps = 45/266 (16%)

Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESV---CKDIGSSSSSAS 64
           L+GK  LI G A  R I    A+  ++ GA++      + L + V    +++GS      
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGS------ 57

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLD-----IMFNNAGTVDEVKPNILDNDQAEFE 119
               + CDVT ++ I+    T   ++GKLD     I F      +E+K + LD  +  F 
Sbjct: 58  -DLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPK---EELKGDYLDTSREGFL 113

Query: 120 RILSIN------LVGAFLGRNMLLGVCGIIG----GA--ATHAY---TSSKHGLLGLMKN 164
             + I+      L  A   R ++     I+     G+      Y     +K  L   ++ 
Sbjct: 114 IAMDISAYSFTALAKAA--RPLMNNGGSILTLTYLGSERVVPNYNVMGVAKAALEASVRY 171

Query: 165 TAVELGRFGIRVNCVSPYAVSTPLA----KDFLKLADDGLGGMYSNLKGAVLEPEDAAEA 220
            A +LG+ GIRVN +S   + T LA     DF K+  +      + L+  V   E+    
Sbjct: 172 LAADLGKEGIRVNAISAGPIRT-LAASGIGDFRKMLKEN--EANAPLRRNV-TIEEVGNT 227

Query: 221 ALYLGSDESKCVSGHNLVVDGGFAIV 246
           A +L SD S  ++G  + VD G+ I+
Sbjct: 228 AAFLLSDLSSGITGEIIYVDSGYHIM 253

Length = 259

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 67.8 bits (165), Expect = 2e-13
 Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 37/259 (14%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLI--ADIKDDLGESVCK---DIGSSSSSAS 64
           L+GKVAL+TG +RGIG   A+  +  GA V I   + K++  E+V +   + GS+ S  +
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 61

Query: 65  GCSYVHCDVTKEKDIENAVNTAV---TQYGKLDIMFNNAGTVDEVKPNILDNDQAE--FE 119
               +H      + + ++++  +   T   K DI+ NNAG    + P     +  E  F+
Sbjct: 62  NLESLH----GVEALYSSLDNELQNRTGSTKFDILINNAG----IGPGAFIEETTEQFFD 113

Query: 120 RILSINLVGAFLGRNMLLGVCGI------IGGAATH-------AYTSSKHGLLGLMKNTA 166
           R++S+N    F      L           I  AAT        AY+ +K  +  +    A
Sbjct: 114 RMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLA 173

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGA---VLEPEDAAEAALY 223
            +LG  GI VN + P  + T +  + L    D +   Y+    A   + E ED A+ A +
Sbjct: 174 KQLGARGITVNAILPGFIKTDMNAELLS---DPMMKQYATTISAFNRLGEVEDIADTAAF 230

Query: 224 LGSDESKCVSGHNLVVDGG 242
           L S +S+ V+G  + V GG
Sbjct: 231 LASPDSRWVTGQLIDVSGG 249

Length = 252

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 67.2 bits (164), Expect = 2e-13
 Identities = 69/256 (26%), Positives = 111/256 (43%), Gaps = 37/256 (14%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHC 71
            +AL+TGG+RGIG  TA L ++ G  V +   ++    + V   I  +   A     +  
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFV---LQA 58

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-FERILSINLVGAF 130
           D++ E  +             L  + NNAG +       ++N  AE   R+LS N+ G F
Sbjct: 59  DISDENQVVAMFTAIDQHDEPLAALVNNAGIL--FTQCTVENLTAERINRVLSTNVTGYF 116

Query: 131 LG-----RNMLL---GVCGIIGGAATHA-----------YTSSKHGLLGLMKNTAVELGR 171
           L      + M L   G  G I   ++ A           Y +SK  +  L    ++E+  
Sbjct: 117 LCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAA 176

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-----EPEDAAEAALYLGS 226
            GIRVNCV P  + T +       A  G  G    +K  +      +PE+ A+A ++L S
Sbjct: 177 QGIRVNCVRPGFIYTEMH------ASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLS 230

Query: 227 DESKCVSGHNLVVDGG 242
           D++  V+G  + + GG
Sbjct: 231 DKASYVTGSFIDLAGG 246

Length = 247

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 67.4 bits (165), Expect = 3e-13
 Identities = 79/273 (28%), Positives = 117/273 (42%), Gaps = 44/273 (16%)

Query: 5   LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSAS 64
           +M  +L+G+VA++TGG+ GIG  T  L  + GA V I    ++   S    +      A 
Sbjct: 1   MMQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGAR 60

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQA--- 116
             +   CDV  E D+         ++G +D++ NNAG     T  +        D A   
Sbjct: 61  LLAAR-CDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADT------TDDAWRD 113

Query: 117 EFE-RILS-INLVGAFLGR------------NMLLGVCGIIGGAATHAYTSSKHGLLGLM 162
           E E +  S IN   AFL              N LL +       AT   ++++ GLL L+
Sbjct: 114 ELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVAT---SAARAGLLNLV 170

Query: 163 KNTAVELGRFGIRVNCVSPYAV-STPLAKDFLKLADDGL------GGMYSNLKGAVL--- 212
           K+ A EL   G+RVN +    V S    + +   AD G         +    KG  L   
Sbjct: 171 KSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARK-KGIPLGRL 229

Query: 213 -EPEDAAEAALYLGSDESKCVSGHNLVVDGGFA 244
             P++AA A  +L S  S   +G ++ V GGFA
Sbjct: 230 GRPDEAARALFFLASPLSSYTTGSHIDVSGGFA 262

Length = 265

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 66.2 bits (161), Expect = 6e-13
 Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 23/258 (8%)

Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGC 66
           ++ L GKVAL+TG +RGIG   A   +  GA V I   ++   ++  + I    S+    
Sbjct: 1   MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNK--QAADETIREIESNGGKA 58

Query: 67  SYVHCDVTK----EKDIENAVNTAVTQYG--KLDIMFNNAGTVDEVKPNILDNDQAEFER 120
             +  D+      +K +E   N    + G  ++DI+ NNAG     +  I +  +  F+ 
Sbjct: 59  FLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGI--GTQGTIENTTEEIFDE 116

Query: 121 ILSINLVGAFL------------GRNMLLGVCGI-IGGAATHAYTSSKHGLLGLMKNTAV 167
           I+++N+   F             GR + +    + +G   + AY  SK  L  +    A 
Sbjct: 117 IMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAK 176

Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD 227
            LG  GI VN + P    T +    L   +       S++ G + + ED A+A  +L S 
Sbjct: 177 HLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASS 236

Query: 228 ESKCVSGHNLVVDGGFAI 245
           +S+ V+G  + V GGF +
Sbjct: 237 DSRWVTGQIIDVSGGFCL 254

Length = 254

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 67.7 bits (166), Expect = 6e-13
 Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 28/142 (19%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKV-LIADIKDDLGESVCKDIGSSSSSASGCS 67
            L GKV LITG + GIG  TA   ++ GA V L+A   + L E +  +I     +  G +
Sbjct: 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDE-LVAEI----RAKGGTA 422

Query: 68  YVH-CDVTKEKDIENAVNTAVTQYGKLDIMFNNAG---------TVDEVKPNILDNDQAE 117
           + + CD+T    +++ V   + ++G +D + NNAG         + D            +
Sbjct: 423 HAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFH---------D 473

Query: 118 FERILSINLVGAFLGRNMLLGV 139
           +ER +++N  GA     ++LG+
Sbjct: 474 YERTMAVNYFGAV---RLILGL 492

Length = 657

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 66.3 bits (162), Expect = 8e-13
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 3/93 (3%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L GK  L+TG + GIGE  A  F++ GA V+    ++DL ++V   I  +   A     
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMA--- 93

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG 101
           V CD++    ++  V     + G +DI+ NNAG
Sbjct: 94  VPCDLSDLDAVDALVADVEKRIGGVDILINNAG 126

Length = 293

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 65.4 bits (160), Expect = 1e-12
 Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 22/191 (11%)

Query: 15  ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT 74
            LITG + GIG   AR F+K G  V +A  + D  + +  ++    +          DVT
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAEL---LNPNPSVEVEILDVT 57

Query: 75  KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-FERILSINLVGAFLGR 133
            E+  +  +     + G LD++  NAG     K   L +   + F   +  NL+GA    
Sbjct: 58  DEERNQLVIAELEAELGGLDLVIINAGVG---KGTSLGDLSFKAFRETIDTNLLGAAAIL 114

Query: 134 NMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNC 178
              L                V  + G     AY++SK  L  L ++   ++ + GIRV  
Sbjct: 115 EAALPQFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTV 174

Query: 179 VSPYAVSTPLA 189
           ++P  + TPL 
Sbjct: 175 INPGFIDTPLT 185

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 65.1 bits (159), Expect = 1e-12
 Identities = 68/262 (25%), Positives = 112/262 (42%), Gaps = 41/262 (15%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLI-----ADIKDDLGESVC--KDIGSSSSS 62
           L+GKV LI GGA+ +G   AR  +  GAK +      A  K D  E+V   K  G+ + +
Sbjct: 6   LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVA 65

Query: 63  ASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL 122
                    D+T    +E   + A   +G+ DI  N  G V  +K  I++  +AE++ + 
Sbjct: 66  FQA------DLTTAAAVEKLFDDAKAAFGRPDIAINTVGKV--LKKPIVEISEAEYDEMF 117

Query: 123 SINLVGAFL-----GRNMLLG--VCGIIG---GAAT---HAYTSSKHGLLGLMKNTAVEL 169
           ++N   AF      GR++     +  ++    GA T    AY  SK  +    +  + E 
Sbjct: 118 AVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAGSKAPVEHFTRAASKEF 177

Query: 170 GRFGIRVNCVSP--------YAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAA 221
           G  GI V  V P        Y      A  + K A       +S  K  + + ED     
Sbjct: 178 GARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTA--AALSPFS--KTGLTDIEDIVPFI 233

Query: 222 LYLGSDESKCVSGHNLVVDGGF 243
            +L +D    ++G  ++++GG+
Sbjct: 234 RFLVTD-GWWITGQTILINGGY 254

Length = 257

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 65.3 bits (160), Expect = 2e-12
 Identities = 67/261 (25%), Positives = 103/261 (39%), Gaps = 50/261 (19%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLI----ADIKDDLG---ESVCKDIGSSSSS 62
           L GK   ITG +RGIG   A   ++ GA ++I    A+    L     +  ++I ++   
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ 63

Query: 63  ASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL 122
           A     +  DV  E  +  AV  AV ++G +DI  NNA  ++       D     F+ + 
Sbjct: 64  ALP---LVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLT--GTEDTPMKRFDLMQ 118

Query: 123 SINLVGAFLGRNMLLGVCGIIGGAATH-------------------AYTSSKHGL----L 159
            IN+ G FL     L    +      H                   AYT +K+G+    L
Sbjct: 119 QINVRGTFLVSQACLP--HLKKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTL 176

Query: 160 GLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAE 219
           GL    A E    GI VN + P       A   L   D+ +    +        PE  A+
Sbjct: 177 GL----AEEFRDDGIAVNALWPRTTIATAAVRNLLGGDEAMRRSRT--------PEIMAD 224

Query: 220 AALYLGSDESKCVSGHNLVVD 240
           AA  + S  ++  +G N ++D
Sbjct: 225 AAYEILSRPAREFTG-NFLID 244

Length = 273

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 64.5 bits (158), Expect = 2e-12
 Identities = 54/229 (23%), Positives = 75/229 (32%), Gaps = 46/229 (20%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           ++GKV L+TG  RGIG          GA KV  A           +D  S +        
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAA----------ARDPESVTDLGPRVVP 53

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  DVT    +  A   A      + I+ NNAG +      +L+ D+      +  N  G
Sbjct: 54  LQLDVTDPASVAAAAEAA----SDVTILVNNAG-IFRTGSLLLEGDEDALRAEMETNYFG 108

Query: 129 ------AF---LGRNM------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
                 AF   L  N       +L V   +       Y++SK     L +    EL   G
Sbjct: 109 PLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQG 168

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL 222
            RV  V P  + T +A                        P D A   L
Sbjct: 169 TRVLGVHPGPIDTDMAAGLDAPKAS---------------PADVARQIL 202

Length = 238

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 65.5 bits (160), Expect = 2e-12
 Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 40/238 (16%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV---CKDIGSSSSS 62
           M+  L G V +ITG + GIG+ TA  F++ GA++++A   ++  ++V   C+ +G+    
Sbjct: 1   MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLV 60

Query: 63  ASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL 122
                 V  DVT    ++     A +  G++D+  NN G V  V     +      E+++
Sbjct: 61  ------VPTDVTDADQVKALATQAASFGGRIDVWVNNVG-VGAVG-RFEETPIEAHEQVI 112

Query: 123 SINLVG----------AFL--GRNMLLGVCGIIGGAAT---HAYTSSKHGLLGLMKNTAV 167
             NL+G           F   G  + + +  + G AA     AY++SK GL G  +    
Sbjct: 113 QTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRG 172

Query: 168 ELGRF-GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK----GAVLEPEDAAEA 220
           EL     I V  V P  + TP  +          G  Y+  +      V +P   A+A
Sbjct: 173 ELADHPDIHVCDVYPAFMDTPGFRH---------GANYTGRRLTPPPPVYDPRRVAKA 221

Length = 330

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 64.2 bits (157), Expect = 4e-12
 Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 50/206 (24%)

Query: 11  QGKVALITGGARGIGECTARLFSKHGAKVLIA----DIKDDLGESVCKDIGSSSSSASGC 66
           Q KVAL+TG + GIG+ TAR  +  G  V  A    D  +DL             ++ G 
Sbjct: 2   QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL-------------ASLGV 48

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNA-----GTVDEVKPNILDNDQAEFERI 121
             +  DVT E  I+ AV+T + + G++D++ NNA     G +++V    +D  + +FE  
Sbjct: 49  HPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVP---IDEARRQFE-- 103

Query: 122 LSINLVGAF------------LGRNMLLGVCGIIG------GAATHAYTSSKHGLLGLMK 163
             +NL GA                  ++ +  + G      GA  HA   +K  L G   
Sbjct: 104 --VNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHA---TKFALEGFSD 158

Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLA 189
              +E+  FGI V  + P  + T   
Sbjct: 159 ALRLEVAPFGIDVVVIEPGGIKTEWG 184

Length = 273

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 63.5 bits (155), Expect = 5e-12
 Identities = 28/83 (33%), Positives = 41/83 (49%)

Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAA 221
           M+      G  GIRVNCV+P  V TP+  DF  +         +   G     ++ A   
Sbjct: 149 MRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVL 208

Query: 222 LYLGSDESKCVSGHNLVVDGGFA 244
           ++L SD ++ ++G NL VDGG A
Sbjct: 209 VFLCSDAARWINGVNLPVDGGLA 231

Length = 241

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 63.6 bits (155), Expect = 5e-12
 Identities = 65/261 (24%), Positives = 103/261 (39%), Gaps = 51/261 (19%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD-----LGE--SVCKDIGSSSSS 62
           L GK   ITG +RGIG+  A   ++ GA V+IA    +      G   +  ++I ++   
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 63  ASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL 122
           A  C     D+  E  +  AV  AV ++G +DI+ NNA  +       LD     ++ ++
Sbjct: 61  ALPCI---VDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLT--GTLDTPMKRYDLMM 115

Query: 123 SINLVGAFLGRNMLLGVCGIIGGAATH-------------------AYTSSKHGL----L 159
            +N  G +L     L    +      H                   AYT +K+G+    L
Sbjct: 116 GVNTRGTYLCSKACLPY--LKKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCVL 173

Query: 160 GLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAE 219
           G+    A E    GI VN + P       A + L   D               +PE  A+
Sbjct: 174 GM----AEEFKPGGIAVNALWPRTAIATAAMNMLGGVDVAACCR---------KPEIMAD 220

Query: 220 AALYLGSDESKCVSGHNLVVD 240
           AA  + +  S   +G N ++D
Sbjct: 221 AAYAILTKPSSEFTG-NFLID 240

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 63.2 bits (154), Expect = 6e-12
 Identities = 70/262 (26%), Positives = 108/262 (41%), Gaps = 57/262 (21%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL+GK   I G + G+G   A    K GA+V I    +   E+  K +  + S      Y
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCI----NSRNENKLKRMKKTLSKYGNIHY 57

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERILS 123
           V  DV+  +   N +  A      +D +    G     TV+E          +  E +L+
Sbjct: 58  VVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEF---------SGLEEMLT 108

Query: 124 INL------VGAFL-----GRNMLL--GVCGIIGGAATH-AYTSSKHGLLGLMKNTAVEL 169
            ++      V A L     G +++L   + GI   +    +Y  +K GL   ++  A EL
Sbjct: 109 NHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASEL 168

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFL---------KLADDGLGGMYSNLKGAVLEPEDAAEA 220
              GIRVN ++P    T ++ DF          KL DD               PED A+ 
Sbjct: 169 LGRGIRVNGIAP----TTISGDFEPERNWKKLRKLGDDMA------------PPEDFAKV 212

Query: 221 ALYLGSDESKCVSGHNLVVDGG 242
            ++L +DE+  V G  + VDGG
Sbjct: 213 IIWLLTDEADWVDGVVIPVDGG 234

Length = 238

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 68/269 (25%), Positives = 112/269 (41%), Gaps = 41/269 (15%)

Query: 6   MLRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSA 63
           M+  L+GK  ++ G A  R I    AR     GAK++     + L + V +   +     
Sbjct: 1   MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQE 60

Query: 64  SGCSYVHCDVTKEKDIENAVNTAVTQYGKLD-----IMFNNAGTVDEVKPNILDNDQAEF 118
           S    + CDVT +++I     T   + G +      I F N    ++++   L+  +  F
Sbjct: 61  S--LLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFAN---KEDLRGEFLETSRDGF 115

Query: 119 ---ERILSINLVG-AFLGRNMLLGVCGII------GGAATHAYT---SSKHGLLGLMKNT 165
              + I + +L   A   + ++     I+      G      Y     +K  L   +K  
Sbjct: 116 LLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGVAKASLEASVKYL 175

Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAV--------LEPEDA 217
           A +LG+ GIRVN +S   + T  AK        G+GG  S LK              E+ 
Sbjct: 176 ANDLGKDGIRVNAISAGPIRTLSAK--------GVGGFNSILKEIEERAPLRRTTTQEEV 227

Query: 218 AEAALYLGSDESKCVSGHNLVVDGGFAIV 246
            + A +L SD S+ V+G N+ VD G+ I+
Sbjct: 228 GDTAAFLFSDLSRGVTGENIHVDSGYHII 256

Length = 257

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 62.4 bits (152), Expect = 2e-11
 Identities = 55/206 (26%), Positives = 81/206 (39%), Gaps = 49/206 (23%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVL--------IADIKDDLGESVCKDIGSSSSSA 63
            KV  ITG +RG G        + G +V+        +AD+ +  G+ +           
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLP--------- 53

Query: 64  SGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGT-----VDEVKPNILDNDQAEF 118
                +  DVT    +  AV TAV  +G+LDI+ NNAG      ++EV        ++E 
Sbjct: 54  -----LALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEV-------TESEA 101

Query: 119 ERILSINLVGAF--------LGRNMLLG-------VCGIIGGAATHAYTSSKHGLLGLMK 163
              +  N  GA           R    G       + GI     +  Y +SK  L G+ +
Sbjct: 102 RAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSE 161

Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLA 189
             A E+  FGI+V  V P   ST  A
Sbjct: 162 ALAQEVAEFGIKVTLVEPGGYSTDWA 187

Length = 275

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 62.1 bits (151), Expect = 2e-11
 Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 36/264 (13%)

Query: 7   LRRLQGKVALITGGAR--GIGECTARLFSKHGAKVLI---ADIKDDLGESVCKD-----I 56
           + +L+ KVA++TG +R  GIG    +  ++ GA +          ++   V +D      
Sbjct: 1   MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQ 60

Query: 57  GSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQA 116
                +    S +  D+T+    +  +N    Q G   I+ NNA        + L     
Sbjct: 61  EELLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNL--TAE 118

Query: 117 EFERILSINLVGAFL--------------GR--NMLLGVC-GIIGGAATHAYTSSKHGLL 159
           E ++   +N+    L              GR  NM  G   G + G    AY ++K  + 
Sbjct: 119 ELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGEL--AYAATKGAID 176

Query: 160 GLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAE 219
            L  + A E+   GI VN ++P    T    + +K    GL  M+    G + EP+DAA 
Sbjct: 177 ALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIK---QGLLPMFP--FGRIGEPKDAAR 231

Query: 220 AALYLGSDESKCVSGHNLVVDGGF 243
              +L S+E++ ++G  +  +GGF
Sbjct: 232 LIKFLASEEAEWITGQIIHSEGGF 255

Length = 256

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 61.2 bits (149), Expect = 3e-11
 Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 22/194 (11%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L G   LITGG  GIG   AR F + G  V+I   +++      K++ +          +
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPN-------IHTI 55

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG- 128
             DV   + +E      +++Y  LDI+ NNAG    +      +D  + +  +  NL+G 
Sbjct: 56  VLDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIGP 115

Query: 129 -----AFL------GRNMLLGVC---GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
                AFL          ++ V      +  AA   Y ++K  L         +L   G+
Sbjct: 116 IRLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTGV 175

Query: 175 RVNCVSPYAVSTPL 188
            V  + P AV T L
Sbjct: 176 EVVEIVPPAVDTEL 189

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 60.8 bits (148), Expect = 4e-11
 Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 26/232 (11%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC- 71
           K  LITG + GIGE TAR F+K GAK+++   + +  + +  ++G+          V   
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVK-----VLPL 55

Query: 72  --DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG- 128
             DV+  + IE A+     ++  +DI+ NNAG    + P   + D  ++E ++  N+ G 
Sbjct: 56  QLDVSDRESIEAALENLPEEFRDIDILVNNAGLALGLDP-AQEADLEDWETMIDTNVKGL 114

Query: 129 ---------AFLGRN----MLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
                      + RN    + LG + G    A  + Y ++K  +     N   +L   GI
Sbjct: 115 LNVTRLILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGI 174

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS 226
           RV  + P  V T  +        +    +Y  ++   L PED AE  L++ S
Sbjct: 175 RVTNIEPGLVETEFSLVRFHGDKEKADKVYEGVEP--LTPEDIAETILWVAS 224

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 60.8 bits (148), Expect = 4e-11
 Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 30/229 (13%)

Query: 14  VALITGGARGIGECTAR-LFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVH-- 70
           V ++TG +RGIG   A  L  +    V++      L  S             G       
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVL-----LARSEEPLQELKEELRPGLRVTTVK 55

Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN----- 125
            D++    +E  +       G+ D++ NNAG++  V   I   D  E ++   +N     
Sbjct: 56  ADLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSK-IEFIDLDELQKYFDLNLTSPV 114

Query: 126 -LVGAFLGRNMLLGVCGII----GGAATH------AYTSSKHGLLGLMKNTAVELGRFGI 174
            L    L      G+   +     GAA +       Y SSK       +  A E     +
Sbjct: 115 CLTSTLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE--PDV 172

Query: 175 RVNCVSPYAVSTPLAKDFL-KLADDGLGGMYSNLK--GAVLEPEDAAEA 220
           RV   +P  V T + ++     AD      + +LK  G +L+PE +AE 
Sbjct: 173 RVLSYAPGVVDTDMQREIRETSADPETRSRFRSLKEKGELLDPEQSAEK 221

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 60.7 bits (148), Expect = 6e-11
 Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 31/230 (13%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L+ K  L+TG + GIG+  A   +  GA++L+     +  E++   +           +
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL----PYPGRHRW 57

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLV 127
           V  D+T E   E AV     + G ++++ NNAG        +L++ D    ER+L++NL 
Sbjct: 58  VVADLTSEAGRE-AVLARAREMGGINVLINNAGVNHF---ALLEDQDPEAIERLLALNLT 113

Query: 128 GAFL------------GRNMLLGV---CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
                              M++ V    G IG     +Y +SK  L G  +    EL   
Sbjct: 114 APMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADT 173

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL 222
           G+RV  ++P A  T        +  + +  +   L  A+ +PED A A L
Sbjct: 174 GVRVLYLAPRATRTA-------MNSEAVQALNRALGNAMDDPEDVAAAVL 216

Length = 263

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 48/199 (24%), Positives = 81/199 (40%), Gaps = 28/199 (14%)

Query: 12  GKVALITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDIGSSSSSASGCS--Y 68
           G  A++TG   GIG+  A   +K G   +LI+  ++ L ++V K+I        G     
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKL-DAVAKEI----EEKYGVETKT 55

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMF--NNAGTVDEVKPNILDNDQAEFERILSINL 126
           +  D +   DI   +   +     LDI    NN G    +    L+  + E + I+++N+
Sbjct: 56  IAADFSAGDDIYERIEKELEG---LDIGILVNNVGISHSIPEYFLETPEDELQDIINVNV 112

Query: 127 VGA-FLGR----NMLLGVCGII----GGAATH------AYTSSKHGLLGLMKNTAVELGR 171
           +    + R     M+    G I      A          Y++SK  L    +    E   
Sbjct: 113 MATLKMTRLILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKS 172

Query: 172 FGIRVNCVSPYAVSTPLAK 190
            GI V  + PY V+T ++K
Sbjct: 173 QGIDVQSLLPYLVATKMSK 191

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 72/278 (25%), Positives = 111/278 (39%), Gaps = 66/278 (23%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           +V ++ G A GIG+  AR     G KVL+AD  ++  E+  K +  +    S       D
Sbjct: 3   EVVVVIG-AGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVST---QEVD 57

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL- 131
           V+  + ++    TA T  G +  + + AG    V P+     QA  E IL ++L G  L 
Sbjct: 58  VSSRESVKALAATAQT-LGPVTGLVHTAG----VSPS-----QASPEAILKVDLYGTALV 107

Query: 132 ----GRNMLLGVCGIIGG------------------AAT--------------------H 149
               G+ +  G  G++                    A T                    H
Sbjct: 108 LEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLH 167

Query: 150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-- 207
           AY  +K      +   AV+ G  G R+N +SP  +STPLA+D L       G  Y N+  
Sbjct: 168 AYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPR---GDGYRNMFA 224

Query: 208 ---KGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG 242
               G    P++ A  A +L       ++G + +VDGG
Sbjct: 225 KSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG 262

Length = 275

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 58.5 bits (142), Expect = 3e-10
 Identities = 55/200 (27%), Positives = 78/200 (39%), Gaps = 24/200 (12%)

Query: 15  ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT 74
            LITG +RGIG    R     G   +IA  +D    +    +G+S S       +  DVT
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLH---ILELDVT 57

Query: 75  KE-KDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGR 133
            E  +   AV         LD++ NNAG +    P   + D  +   +  +N++G  L  
Sbjct: 58  DEIAESAEAV-AERLGDAGLDVLINNAGILHSYGP-ASEVDSEDLLEVFQVNVLGPLLLT 115

Query: 134 NMLL------GVCGII------------GGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
              L          II                 ++Y +SK  L  L K+ AVEL R GI 
Sbjct: 116 QAFLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGIT 175

Query: 176 VNCVSPYAVSTPLAKDFLKL 195
           V  + P  V T +   F K 
Sbjct: 176 VVSLHPGWVRTDMGGPFAKN 195

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 58.1 bits (141), Expect = 3e-10
 Identities = 68/255 (26%), Positives = 99/255 (38%), Gaps = 49/255 (19%)

Query: 16  LITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK 75
           L+ GG+ GIG   AR F+  GA+V IA    D   +  + +G      +       D+T 
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG----GAPVRTAALDITD 56

Query: 76  EKDIENAVNTAVTQYGKLDIMFNNAGTVDEV--------KPNILDNDQAEFERILSINLV 127
           E  ++                F  AG  D V           +     A  +  +     
Sbjct: 57  EAAVDA--------------FFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFW 102

Query: 128 GA-FLGRNMLLGVCGII---GGAATH--AYTSSKHG-----LLGLMKNTAVELGRFGIRV 176
           GA  + R   +   G +    G A    + +    G     L  L +  A+EL    +RV
Sbjct: 103 GAYRVARAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRV 160

Query: 177 NCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-----GAVLEPEDAAEAALYLGSDESKC 231
           N VSP  V TPL   + KLA D    M++          V +PED A A L+L    +  
Sbjct: 161 NTVSPGLVDTPL---WSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLA--ANGF 215

Query: 232 VSGHNLVVDGGFAIV 246
            +G  ++VDGG AIV
Sbjct: 216 TTGSTVLVDGGHAIV 230

Length = 230

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 58.1 bits (141), Expect = 5e-10
 Identities = 68/261 (26%), Positives = 99/261 (37%), Gaps = 33/261 (12%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M   L GK  LITG ++GIG   A  F+  G  + +     D  E++  D+ ++      
Sbjct: 1   MDLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVA 60

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILS-- 123
              +  D++  +  E     A    G +DI+ NNAG +      + D D A +       
Sbjct: 61  VHAL--DLSSPEAREQLAAEA----GDIDILVNNAGAIP--GGGLDDVDDAAWRAGWELK 112

Query: 124 ----INLVGAFLGRNM------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG--- 170
               I+L      R        ++ V G  G      Y     G   LM  T   LG   
Sbjct: 113 VFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRA-LGGKS 171

Query: 171 -RFGIRVNCVSPYAVSTPLAKDFLK---LADDGLGGMYSNLK-----GAVLEPEDAAEAA 221
              G+RV  V+P  V+T      LK    A+ G    +  L      G    PE+ A+  
Sbjct: 172 LDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLV 231

Query: 222 LYLGSDESKCVSGHNLVVDGG 242
            +L S  S   SG  + VDGG
Sbjct: 232 AFLASPRSGYTSGTVVTVDGG 252

Length = 259

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 57.9 bits (140), Expect = 6e-10
 Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 35/260 (13%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L GK+A  T  ++GIG   AR+ ++ GA V++    ++  +   + I S S+     SY+
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVD--VSYI 63

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPN-ILDNDQAEFERILSINLVG 128
             D+TK +D+E  V   +   G+ DI F + G     KP   ++    ++E  + + L  
Sbjct: 64  VADLTKREDLERTVK-ELKNIGEPDIFFFSTGG---PKPGYFMEMSMEDWEGAVKLLLYP 119

Query: 129 A-FLGRNMLLGVCGIIGGAATHAYTSS----------------KHGLLGLMKNTAVELGR 171
           A +L R ++  +     G     Y++S                +  + GL++  A ELG 
Sbjct: 120 AVYLTRALVPAM--ERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGP 177

Query: 172 FGIRVNCVSPYAVSTP----LAKDFLKLADDGLGGMYSNLK-----GAVLEPEDAAEAAL 222
            GI VN + P  + T     LA+D  K     +             G + EPE+      
Sbjct: 178 KGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVA 237

Query: 223 YLGSDESKCVSGHNLVVDGG 242
           +L SD    ++G  + VDGG
Sbjct: 238 FLASDLGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 57.5 bits (139), Expect = 8e-10
 Identities = 61/254 (24%), Positives = 95/254 (37%), Gaps = 52/254 (20%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSAS------G 65
           GK  +ITG   GIG+ TAR  ++ GA+V++A          C+D+     +A+       
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMA----------CRDMAKCEEAAAEIRRDTL 50

Query: 66  CSYV---HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL 122
              V   H D+   K I       + +  +LD++ NNAG +        D     FE   
Sbjct: 51  NHEVIVRHLDLASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTEDG----FEMQF 106

Query: 123 SINLVGAFLGRNMLLG---------------VCGIIGGAATH------------AYTSSK 155
            +N +G FL  N+LL                +    G                 AY  SK
Sbjct: 107 GVNHLGHFLLTNLLLDLLKKSAPSRIVNVSSLAHKAGKINFDDLNSEKSYNTGFAYCQSK 166

Query: 156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGA-VLEP 214
              +   +  A  L   G+ VN + P  V T L +    +    L  + + L    V  P
Sbjct: 167 LANVLFTRELARRLQGTGVTVNALHPGVVRTELGR-HTGIHHLFLSTLLNPLFWPFVKTP 225

Query: 215 EDAAEAALYLGSDE 228
            + A+ ++YL   E
Sbjct: 226 REGAQTSIYLALAE 239

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 55/213 (25%), Positives = 77/213 (36%), Gaps = 46/213 (21%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIA--DIKDDLGESVCKDIGSSSSSASGCS 67
           L GK+AL+TG +RGIG   A    + GA V I    I   L  +         +    C 
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGT----AEEIEARGGKCI 56

Query: 68  YVHCDVTKEKDIENAV-NTAVTQYGKLDIMFNNA-GTVD-----------EVKPNILDND 114
            V CD + + ++E      A  Q G+LDI+ NNA   V            E  P I D+ 
Sbjct: 57  PVRCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDD- 115

Query: 115 QAEFERILSINLVG--------AFLGRNMLLGVCGIIGGAATHAYTSSKHGL-LGLMKNT 165
                    IN VG         +    M+    G+I   ++         +  G+ K  
Sbjct: 116 ---------INNVGLRAHYACSVYAAPLMVKAGKGLIVIISSTGGLEYLFNVAYGVGKAA 166

Query: 166 --------AVELGRFGIRVNCVSPYAVSTPLAK 190
                   A EL   G+ V  + P  V T L  
Sbjct: 167 IDRMAADMAHELKPHGVAVVSLWPGFVRTELVL 199

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 51/192 (26%), Positives = 77/192 (40%), Gaps = 25/192 (13%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
            V LITG + GIG   A  F   G +V     K +  E++         +A+G + V  D
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL---------AAAGFTAVQLD 52

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL---VG- 128
           V     +         ++G LD++ NNAG        +LD       R    N+   VG 
Sbjct: 53  VNDGAALARLAEELEAEHGGLDVLINNAGY--GAMGPLLDGGVEAMRRQFETNVFAVVGV 110

Query: 129 -----AFLGRNMLL-----GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNC 178
                  L R+  L      V G++      AY +SK  +  L     +EL  FG++V  
Sbjct: 111 TRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVME 170

Query: 179 VSPYAVSTPLAK 190
           V P A+++  A 
Sbjct: 171 VQPGAIASQFAS 182

Length = 274

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 18/99 (18%)

Query: 153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL 212
           +SK  +  ++K  A ELG   IRVN VS      P+  D LK   +     Y  +K    
Sbjct: 167 TSKAAVETMVKYAATELGEKNIRVNAVS----GGPIDTDALKAFTN-----YEEVKAKTE 217

Query: 213 E---------PEDAAEAALYLGSDESKCVSGHNLVVDGG 242
           E         PED A A L+L S+++  ++G  +VVDGG
Sbjct: 218 ELSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGG 256

Length = 260

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 11/149 (7%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L GK A++TGG  G+G  T R  ++ GA V++   + D+       I        G   V
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI-------DGVEVV 76

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             D+   + +       +    ++DI+ NNAG +    P     D  E +   + N +G 
Sbjct: 77  MLDLADLESVRAFAERFLDSGRRIDILINNAGVM--ACPETRVGDGWEAQ--FATNHLGH 132

Query: 130 FLGRNMLLGVCGIIGGAATHAYTSSKHGL 158
           F   N+L        GA   A +S+ H  
Sbjct: 133 FALVNLLWPALAAGAGARVVALSSAGHRR 161

Length = 315

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 55.7 bits (134), Expect = 3e-09
 Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 27/245 (11%)

Query: 16  LITGGARGIGECTARLFSKHGAKVLIADIKDDLG-ESVCKDIGSSSSSASGCSYVHCDVT 74
           L+TG +RGIG   A   +  G ++ +         ESV   I +   +A    +   DV 
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQF---DVA 58

Query: 75  KEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAFL-- 131
                   +   + ++G    +  NAG T D   P + +    +++ ++  NL G +   
Sbjct: 59  DRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSE---EDWDIVIHTNLDGFYNVI 115

Query: 132 -------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVN 177
                        GR + L  V G++G      Y+++K GL+G  K  AVEL +  I VN
Sbjct: 116 HPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVN 175

Query: 178 CVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNL 237
           C++P  + T +  +     D+ L  +  N  G   +P + A  A +L SD +  V+   +
Sbjct: 176 CIAPGLIDTEMLAEVEHDLDEALKTVPMNRMG---QPAEVASLAGFLMSDGASYVTRQVI 232

Query: 238 VVDGG 242
            V+GG
Sbjct: 233 SVNGG 237

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 55.1 bits (133), Expect = 5e-09
 Identities = 56/250 (22%), Positives = 95/250 (38%), Gaps = 46/250 (18%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVL-IADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
           +  +ITG ++G+GE  A    + G  V+ I+  ++       +    +    S  ++   
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENK------ELTKLAEQYNSNLTFHSL 55

Query: 72  DVTKEKDIENAVNT---AVTQYGKLDIMF-NNAGTVDEVKPNILDNDQAEFERILSINLV 127
           D+    ++E   N    ++ +     I   NNAG V  +KP I   +  E    + +NL+
Sbjct: 56  DLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKP-IEKAESEELITNVHLNLL 114

Query: 128 GAFL----------GRNMLLGVCGIIGGAATH------AYTSSKHGLLGLMKNTAVE--L 169
              +             +   V  I  GAA +      AY SSK GL    +  A E   
Sbjct: 115 APMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEE 174

Query: 170 GRFGIRVNCVSPYAVSTPLA--------KDFLKLADDGLGGMYSNLK--GAVLEPEDAAE 219
             + +++   SP  + T +         +DF  L        +  LK  G +L PE  A+
Sbjct: 175 EEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDR------FITLKEEGKLLSPEYVAK 228

Query: 220 AALYLGSDES 229
           A   L   E 
Sbjct: 229 ALRNLLETED 238

Length = 251

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 55.1 bits (133), Expect = 5e-09
 Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 22/183 (12%)

Query: 15  ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT 74
           AL+ G + GIG  TA   +  G  V +   + +  E +   I +    A        DVT
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVA---FPLDVT 69

Query: 75  KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVGAF-LG 132
               +++ V  A    G+++++ + AG   +     L      +FE  + I+LVGA  L 
Sbjct: 70  DPDSVKSFVAQAEEALGEIEVLVSGAG---DTYFGKLHEISTEQFESQVQIHLVGANRLA 126

Query: 133 RNMLLGV--------------CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNC 178
             +L G+                +       AY ++K GL  ++ N  +EL   G+R + 
Sbjct: 127 TAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASI 186

Query: 179 VSP 181
           V P
Sbjct: 187 VHP 189

Length = 274

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 29/197 (14%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
            K+A++TG + G G  T    +K G  V IA +++   +       +  +          
Sbjct: 3   KKIAIVTGASSGFGLLTTLELAKKGYLV-IATMRNPEKQENLLSQATQLNLQQNIKVQQL 61

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGT-----VDEVKPNILDNDQAEFERILSINL 126
           DVT +  I N     + + G++D++ NNAG      V+E+    ++    E+ +    N+
Sbjct: 62  DVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIP---VE----EYRKQFETNV 113

Query: 127 VGAFL--------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
            GA                G+ + +  + G +G      Y SSK+ L G  ++  +EL  
Sbjct: 114 FGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKP 173

Query: 172 FGIRVNCVSPYAVSTPL 188
           FGI V  + P + +T +
Sbjct: 174 FGIDVALIEPGSYNTNI 190

Length = 280

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 49/199 (24%), Positives = 77/199 (38%), Gaps = 33/199 (16%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSS----SSSASG 65
           ++ K  L+TG  RGIG+        HGAK + A           +D GS+    +     
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYA---------AVRDPGSAAHLVAKYGDK 51

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              +  DVT  + I+ A   A      +D++ NNAG V +    + +      ++ + +N
Sbjct: 52  VVPLRLDVTDPESIKAAAAQA----KDVDVVINNAG-VLKPATLLEEGALEALKQEMDVN 106

Query: 126 LVG------AF---LGRNM------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           + G      AF   L  N       L  V  +    A   Y++SK     L +    EL 
Sbjct: 107 VFGLLRLAQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELA 166

Query: 171 RFGIRVNCVSPYAVSTPLA 189
             G  V  V P  + T +A
Sbjct: 167 AQGTLVLSVHPGPIDTRMA 185

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 71/265 (26%), Positives = 107/265 (40%), Gaps = 43/265 (16%)

Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           + GK  LI G A  R I    A+     GA++         G+++ K +   ++      
Sbjct: 8   MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTY----QGDALKKRVEPLAAELGAFV 63

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVD--EVKPNILDNDQAEFERILSIN 125
             HCDVT E  I+    T   ++GKLD + +  G  D  E+    +D  +  F   + I+
Sbjct: 64  AGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDIS 123

Query: 126 LVG--AFLGRNMLLGVCGIIGGAATHAYTSS-------------KHGLLGLMKNTAVELG 170
           +    A   R   L   G  G   T  Y  +             K  L   +K  AV+LG
Sbjct: 124 VYSFTAVAQRAEKLMTDG--GSILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLG 181

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY---------SNLKGAVLEPEDAAEAA 221
              IRVN +S   + T        LA  G+G            + L+  V   E+  ++A
Sbjct: 182 PKNIRVNAISAGPIKT--------LAASGIGDFRYILKWNEYNAPLRRTVTI-EEVGDSA 232

Query: 222 LYLGSDESKCVSGHNLVVDGGFAIV 246
           LYL SD S+ V+G    VD G+ +V
Sbjct: 233 LYLLSDLSRGVTGEVHHVDSGYHVV 257

Length = 272

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 4e-08
 Identities = 67/259 (25%), Positives = 105/259 (40%), Gaps = 60/259 (23%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVL-IA--DIKDDLGESVCKDIGSSSSSASGCSYV 69
           +  L+TG  +GIG   +   +  G +V+ IA   I D  GE    D+     +A      
Sbjct: 4   RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTA------ 57

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSIN--- 125
                       A    + +   +D + NN G      P  L   D A  + +  +N   
Sbjct: 58  ------------ATLAQINEIHPVDAIVNNVGIA---LPQPLGKIDLAALQDVYDLNVRA 102

Query: 126 ---LVGAFL--------GRNMLLGVC--GIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
              +  AFL        GR  ++ +C   I G     +Y+++K  L+G  +  A+EL  +
Sbjct: 103 AVQVTQAFLEGMKLREQGR--IVNICSRAIFGALDRTSYSAAKSALVGCTRTWALELAEY 160

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE---------PEDAAEAALY 223
           GI VN V+P  + T L   F +    G     S  +  VL          PE+ A A  +
Sbjct: 161 GITVNAVAPGPIETEL---FRQTRPVG-----SEEEKRVLASIPMRRLGTPEEVAAAIAF 212

Query: 224 LGSDESKCVSGHNLVVDGG 242
           L SD++  ++G  L VDGG
Sbjct: 213 LLSDDAGFITGQVLGVDGG 231

Length = 234

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 52.1 bits (125), Expect = 5e-08
 Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 34/254 (13%)

Query: 16  LITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK 75
           L+T  +RGIG   AR   K GA+V+I+   ++  E   K++            V  D++ 
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKEL----KEYGEVYAVKADLSD 59

Query: 76  EKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN----DQAEFERI-------LSI 124
           + D++N V  A    G +D +  NAG V   +P +L      D  E   +       L+ 
Sbjct: 60  KDDLKNLVKEAWELLGGIDALVWNAGNV-RCEPCMLHEAGYSDWLEAALLHLVAPGYLTT 118

Query: 125 NLVGAFLGRNMLLGVCGIIGGAATHA-------YTSSKHGLLGLMKNTAVELGRFGIRVN 177
            L+ A+L + M  GV   +   +             ++ GL+ L K  +   G  GIR  
Sbjct: 119 LLIQAWLEKKM-KGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAY 177

Query: 178 CVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLE---------PEDAAEAALYLGSD 227
            V   +  TP A++ L    +  G  +    +  VLE          E+      +L S+
Sbjct: 178 TVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSE 237

Query: 228 ESKCVSGHNLVVDG 241
            ++ + G  +V DG
Sbjct: 238 NAEYMLGSTIVFDG 251

Length = 259

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 4/92 (4%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSSSSSASGCSY 68
           L GK AL+TG +RGIG  TA++ +  GA V++    K      V  +I ++   AS    
Sbjct: 4   LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASA--- 60

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNA 100
           V  D+T E+ +   ++TA  ++G LD +  NA
Sbjct: 61  VGADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 11/128 (8%)

Query: 12  GKVALITGGARGIG-ECTARLFSKHGAKVLIAD--IKDDLGESVCKDIGSSSSSASGCSY 68
           G V L+TGGA GIG      L  ++GA++++          E   + + +  +  +   Y
Sbjct: 205 GGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLY 264

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL------ 122
           +  DVT    +   +     +YG +D + + AG + +    +      +FE +L      
Sbjct: 265 ISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDA--LLAQKTAEDFEAVLAPKVDG 322

Query: 123 SINLVGAF 130
            +NL  A 
Sbjct: 323 LLNLAQAL 330

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 1/90 (1%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
           G+VA++TG   G+G  TA   +  GA V++A    D G++    I +++  A   +    
Sbjct: 16  GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGAD-VTLQEL 74

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAG 101
           D+T    +  A +     Y ++D++ NNAG
Sbjct: 75  DLTSLASVRAAADALRAAYPRIDLLINNAG 104

Length = 306

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.6 bits (118), Expect = 3e-07
 Identities = 72/265 (27%), Positives = 103/265 (38%), Gaps = 39/265 (14%)

Query: 10  LQGKVALITGGAR--GIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           LQGK  LITG A    I    A+L  KHGA++      + L + V        +   GC+
Sbjct: 6   LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRV-----KPLAEEIGCN 60

Query: 68  YV-HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVD--EVKPNILDNDQAEFERILSI 124
           +V   DVT  K I N  +    ++G  D + +     D  E+K   +D     F   L I
Sbjct: 61  FVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHI 120

Query: 125 NLVGAFLGRNMLLGVCGIIGGAATHAYTS-------------SKHGLLGLMKNTAVELGR 171
           +             +    G   T  Y               +K  L   +K  A ++G 
Sbjct: 121 SCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLANDMGE 180

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKG-AVLEP-------EDAAEAALY 223
             IRVN +S   + T        LA   +G   + LK  A   P       ED   AA+Y
Sbjct: 181 NNIRVNAISAGPIKT--------LASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVY 232

Query: 224 LGSDESKCVSGHNLVVDGGFAIVNA 248
           L S+ SK V+G    VD G+ I+ +
Sbjct: 233 LFSELSKGVTGEIHYVDCGYNIMGS 257

Length = 260

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 48.3 bits (115), Expect = 6e-07
 Identities = 59/221 (26%), Positives = 84/221 (38%), Gaps = 41/221 (18%)

Query: 15  ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT 74
           ALI G   GIG   AR  +  G ++L+            +D G+ +  A+          
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLL----------SGRDAGALAGLAAE-VGALARPA 49

Query: 75  KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL--- 131
                E  V     + G LD++   AG +   KP +     A + RIL  NL GA L   
Sbjct: 50  DVAA-ELEVWALAQELGPLDLLVYAAGAILG-KP-LARTKPAAWRRILDANLTGAALVLK 106

Query: 132 ---------GRNMLLGV-CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSP 181
                     R + LG    ++      AY ++K  L   ++    E+   G+R+  V P
Sbjct: 107 HALALLAAGARLVFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEVR--GLRLTLVRP 164

Query: 182 YAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL 222
            AV T L     +L            KGA L PED A A L
Sbjct: 165 PAVDTGLWAPPGRLP-----------KGA-LSPEDVAAAIL 193

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 48.8 bits (116), Expect = 6e-07
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 94/297 (31%)

Query: 14  VALITGGARGIGECTARLFSKHGAKVLI---------ADIKDDLGES------VCK-DIG 57
            A++TG A+ IG   A    + G +V++         + +  +L          C+ D+ 
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLS 62

Query: 58  SSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGT--------------V 103
           +S++  S C             E  ++     +G+ D++ NNA                V
Sbjct: 63  NSATLFSRC-------------EAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGV 109

Query: 104 DEVKPNILDNDQAEF---ERILSINLVGAFLGR----------------NM--------L 136
            + K   L+   AE      I    L+ AF  R                N+        L
Sbjct: 110 GDKKS--LEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPL 167

Query: 137 LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA 196
           LG            YT +KH L GL ++ A+EL    IRVN V+P     P A  F ++ 
Sbjct: 168 LGFT---------MYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPF-EVQ 217

Query: 197 DD-----GLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA 248
           +D      LG   ++        E  A+  ++L S ++K ++G  + VDGG ++  A
Sbjct: 218 EDYRRKVPLGQREAS-------AEQIADVVIFLVSPKAKYITGTCIKVDGGLSLTRA 267

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 45/212 (21%), Positives = 75/212 (35%), Gaps = 28/212 (13%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           +  G   LITGGA GIG   A+ F + G  V+I    ++       +     +       
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEV----- 56

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEV----KPNILDNDQAEFERIL-- 122
             CDV         V     +Y  L+++ NNAG           ++LD+ + E    L  
Sbjct: 57  --CDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLA 114

Query: 123 SINLVGAFLGR----------NMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            I L    L            N+  G+   +  A+T  Y ++K  +         +L   
Sbjct: 115 PIRLTALLLPHLLRQPEATIINVSSGL-AFVPMASTPVYCATKAAIHSYTLALREQLKDT 173

Query: 173 GIRVNCVSPYAVSTPL----AKDFLKLADDGL 200
            + V  ++P  V T      A+  + L+    
Sbjct: 174 SVEVIELAPPLVDTTEGNTQARGKMPLSAFIS 205

Length = 245

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 22/96 (22%)

Query: 14  VALITGGARGIGECTARLFSKHGAKVL--------IADIKDDLGESVCKDIGSSSSSASG 65
           + L+TG   G GEC  R F + G KV+        + ++KD+LG+++             
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNL------------- 48

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG 101
                 DV     IE  + +   ++  +D++ NNAG
Sbjct: 49  -YIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAG 83

Length = 248

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 46.8 bits (112), Expect = 3e-06
 Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 27/131 (20%)

Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERILSIN 125
            DVT    I+  V  A   +G +D++ NNAG      ++E       +  AE  R   +N
Sbjct: 57  LDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEE-------SPLAEMRRQFEVN 109

Query: 126 LVG------AFL------GRNMLLGVC---GIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           + G      A L       R  ++ +    G+I       Y  SK  L G+ ++ A E+ 
Sbjct: 110 VFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVA 169

Query: 171 RFGIRVNCVSP 181
            FGI V  V P
Sbjct: 170 PFGIHVTAVEP 180

Length = 277

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 45/197 (22%), Positives = 76/197 (38%), Gaps = 29/197 (14%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           K  LITG   G G   A+     G  VL   +  +   +  K++    S       +  D
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGA--KELRRVCSDR--LRTLQLD 56

Query: 73  VTKEKDIENAVNTAVTQYGKLDI--MFNNAG--TVDEVKPNILDNDQAEFERILSINLVG 128
           VTK + I+ A        G+  +  + NNAG       +  +  +D   + + + +NL G
Sbjct: 57  VTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDD---YRKCMEVNLFG 113

Query: 129 ------AFL-------GRNMLLGVCGIIGGAA---THAYTSSKHGLLGLMKNTAVELGRF 172
                 AFL       GR  ++ V  + G        AY +SK  +     +   EL  +
Sbjct: 114 TVEVTKAFLPLLRRAKGR--VVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPW 171

Query: 173 GIRVNCVSPYAVSTPLA 189
           G++V+ + P    T + 
Sbjct: 172 GVKVSIIEPGNFKTGIT 188

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 31/191 (16%)

Query: 14  VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDV 73
             LITG   GIG+  A  ++K G +V    I     +SV  ++ + S++    ++   DV
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQV----IACGRNQSVLDELHTQSANIFTLAF---DV 55

Query: 74  TKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGR 133
           T     + A++         ++   NAG  + +    +D       R+ ++N++G     
Sbjct: 56  TDHPGTKAALSQLPFI---PELWIFNAGDCEYMDDGKVD--ATLMARVFNVNVLGV---A 107

Query: 134 NMLLGV-----CG----IIGGAATH-------AYTSSKHGLLGLMKNTAVELGRFGIRVN 177
           N + G+     CG    I+G  A+        AY +SK  +    +   ++L   GI V 
Sbjct: 108 NCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVV 167

Query: 178 CVSPYAVSTPL 188
            V P  V+TPL
Sbjct: 168 TVFPGFVATPL 178

Length = 240

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 46.8 bits (112), Expect = 3e-06
 Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 34/194 (17%)

Query: 17  ITGGARGIGECTARLFSKHGAKV-LIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK 75
           ITG + GIG+  AR +++ GA + L+A   D L         +    A+  S    DV  
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQAFA-----ARLPKAARVSVYAADVRD 61

Query: 76  EKDIENAVNTAVTQYGKLDIMFNNAG----TVDEVKPNILDNDQAEFERILSINLVGA-- 129
              +  A    +  +G  D++  NAG    T+ E +      D A F  ++  N  G   
Sbjct: 62  ADALAAAAADFIAAHGLPDVVIANAGISVGTLTEER-----EDLAVFREVMDTNYFGMVA 116

Query: 130 ----FL------GRNMLLG---VCGIIG--GAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
               F+       R  L+G   V G+ G  GA   AY++SK   +  +++  VEL   G+
Sbjct: 117 TFQPFIAPMRAARRGTLVGIASVAGVRGLPGAG--AYSASKAAAIKYLESLRVELRPAGV 174

Query: 175 RVNCVSPYAVSTPL 188
           RV  ++P  + TP+
Sbjct: 175 RVVTIAPGYIRTPM 188

Length = 257

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 48/199 (24%), Positives = 81/199 (40%), Gaps = 29/199 (14%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           +  LITG + GIG   AR     G +V  A  + +      +D+  ++  A G      D
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRV-FATCRKE------EDV--AALEAEGLEAFQLD 55

Query: 73  VTKEKDIENAVNTAVTQY-GKLDIMFNN-----AGTVDEVKPNILDNDQAEFE------R 120
             + + I   V   +    G+LD +FNN      G V+++    L   +A+FE       
Sbjct: 56  YAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEAL---RAQFEANFFGWH 112

Query: 121 ILSINLVGAF--LGRNMLLGVCGIIGGAATH---AYTSSKHGLLGLMKNTAVELGRFGIR 175
            L+  ++      G+  ++    I+G        AY +SK  + GL     +EL   GI 
Sbjct: 113 DLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIH 172

Query: 176 VNCVSPYAVSTPLAKDFLK 194
           V+ + P  + T    + L 
Sbjct: 173 VSLIEPGPIETRFRANALA 191

Length = 277

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 68/273 (24%), Positives = 106/273 (38%), Gaps = 58/273 (21%)

Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           L GK AL+TG A  R I    A+     GA++ I  + D+ G    K +   +   +   
Sbjct: 4   LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKK-VRELTEPLNPSL 62

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIM-----FNNAGTVDEVKPNILDNDQAEFERIL 122
           ++ CDV  +  IE    T   ++GKLDI+     F      +E+  +     +  F R L
Sbjct: 63  FLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGK---EELIGDFSATSREGFARAL 119

Query: 123 SI------NLVGA---------------FLGRNMLLGVCGIIGGAATHAYTSSKHGLLGL 161
            I       L  A               +LG    +    ++G A        K  L   
Sbjct: 120 EISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMGVA--------KAALEAS 171

Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY---------SNLKGAVL 212
           ++  A ELG   IRVN +S   + T        LA   +GG+          + L+  V 
Sbjct: 172 VRYLAAELGPKNIRVNAISAGPIRT--------LASSAVGGILDMIHHVEEKAPLRRTVT 223

Query: 213 EPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI 245
           + E     A +L SD +  ++G  + VD G+ I
Sbjct: 224 QTE-VGNTAAFLLSDLASGITGQTIYVDAGYCI 255

Length = 258

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 46.0 bits (110), Expect = 4e-06
 Identities = 48/198 (24%), Positives = 68/198 (34%), Gaps = 58/198 (29%)

Query: 15  ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT 74
            ++ G    IG   A+L S HG +V+ A              G SS           D+T
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITA--------------GRSSGD------YQVDIT 40

Query: 75  KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL------------ 122
            E  I+        + G  D + + AG   E  P   +   A+F+R L            
Sbjct: 41  DEASIKALF----EKVGHFDAIVSTAGDA-EFAPLA-ELTDADFQRGLNSKLLGQINLVR 94

Query: 123 ----------SINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
                     SI L    L +  + G       A  +        L G ++  A+EL R 
Sbjct: 95  HGLPYLNDGGSITLTSGILAQRPIPGG---AAAATVNG------ALEGFVRAAAIELPR- 144

Query: 173 GIRVNCVSPYAVSTPLAK 190
           GIR+N VSP  V   L  
Sbjct: 145 GIRINAVSPGVVEESLEA 162

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 61/232 (26%), Positives = 90/232 (38%), Gaps = 38/232 (16%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
             ALITG +RGIG   AR  +     +L     + L E +  ++  ++           D
Sbjct: 4   PTALITGASRGIGAAIARELAPTHTLLLGGRPAERLDE-LAAELPGATPFPV-------D 55

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG-AFL 131
           +T  + I      AV Q G+LD++ +NAG  D     + ++   E+   L +N+V  A L
Sbjct: 56  LTDPEAIA----AAVEQLGRLDVLVHNAGVAD--LGPVAESTVDEWRATLEVNVVAPAEL 109

Query: 132 GRNMLLG-------VCGIIGGAATHA------YTSSKHGLLGLMKNTAVELGRFGIRVNC 178
            R +L         V  I  GA   A      Y +SK  L  L      E     +RV  
Sbjct: 110 TRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFALRALADALREE-EPGNVRVTS 168

Query: 179 VSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEA---ALYLGSD 227
           V P    T + +  +       GG Y       L PE  A+A   A+    D
Sbjct: 169 VHPGRTDTDMQRGLV----AQEGGEYD--PERYLRPETVAKAVRFAVDAPPD 214

Length = 227

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 45.8 bits (108), Expect = 6e-06
 Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 27/249 (10%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           ++A +TGG  GIG    +   K G KV+     +    S  +        A G  ++  +
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPN----SPRRVKWLEDQKALGFDFIASE 59

Query: 73  --VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF 130
             V      + A +    + G++D++ NNAG   +V    +   + ++  ++  NL   F
Sbjct: 60  GNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMT--REDWTAVIDTNLTSLF 117

Query: 131 --------------LGRNM-LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
                          GR + +  V G  G      Y+++K G+ G   + A E+   G+ 
Sbjct: 118 NVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVT 177

Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKCVSG 234
           VN VSP  + T + K    +  D L  + + +    L  P++      +L S+ES   +G
Sbjct: 178 VNTVSPGYIGTDMVK---AIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTG 234

Query: 235 HNLVVDGGF 243
            +  ++GG 
Sbjct: 235 ADFSLNGGL 243

Length = 246

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 45.7 bits (109), Expect = 7e-06
 Identities = 59/260 (22%), Positives = 90/260 (34%), Gaps = 56/260 (21%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
           + AL+TG AR IG   A   + HG  V +  +   D  E++  +I +    A     +  
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVA---LQA 66

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF- 130
           D+  E ++   V  A    G + ++ NNA   +    +     +A ++R ++ NL   F 
Sbjct: 67  DLADEAEVRALVARASAALGPITLLVNNASLFEY--DSAASFTRASWDRHMATNLRAPFV 124

Query: 131 LGRNMLLGVCGIIGGAATHA-----------------------YTSSKHGLLGLMKNTAV 167
           L +             A  A                       YT SK  L    +  A 
Sbjct: 125 LAQAF---------ARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAALWTATRTLAQ 175

Query: 168 ELG-RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----EPEDAAEAAL 222
            L  R  IRVN + P           L                  L     PE+ A A  
Sbjct: 176 ALAPR--IRVNAIGPGPT--------LPSGRQSPEDFARQHAATPLGRGSTPEEIAAAVR 225

Query: 223 YLGSDESKCVSGHNLVVDGG 242
           YL   ++  V+G  + VDGG
Sbjct: 226 YLL--DAPSVTGQMIAVDGG 243

Length = 258

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 45.3 bits (107), Expect = 9e-06
 Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 20/196 (10%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L  K  L+TG ++G+GE  A+ ++  GA V++        E V   I  +          
Sbjct: 4   LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRF 63

Query: 70  HCDVTKEKDIEN-AVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQ-AEFERILSINLV 127
                +EK+ E  A   A    GKLD + + AG    + P  LD    AE+     IN V
Sbjct: 64  DLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSP--LDFQTVAEWVNQYRINTV 121

Query: 128 GAFLGRNMLLGV------CGIIGGAATH---------AYTSSKHGLLGLMKNTAVELGRF 172
                   L  +        +I    +H          + +SK  L  L K  A E  RF
Sbjct: 122 APMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWERF 181

Query: 173 G-IRVNCVSPYAVSTP 187
           G +R N + P  +++P
Sbjct: 182 GNLRANVLVPGPINSP 197

Length = 239

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 45.5 bits (108), Expect = 9e-06
 Identities = 71/268 (26%), Positives = 106/268 (39%), Gaps = 49/268 (18%)

Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           +QGK  LI G A    I    A+  +  GA++      + LG+ V K +  S     G  
Sbjct: 5   MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRV-KPLAESL----GSD 59

Query: 68  YV-HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVD--EVKPNILDNDQAEFERILSI 124
           +V  CDV     ++        ++GKLD + +  G  D  E+K    D  +  F R + I
Sbjct: 60  FVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVI 119

Query: 125 NL-----VGAFLGRNMLLGVCGIIGGAATHAYTSS-------------KHGLLGLMKNTA 166
           +      +     + M  G     G   T  Y  S             K  L   ++  A
Sbjct: 120 SCFSFTEIAKRAAKLMPDG-----GSMLTLTYGGSTRVMPNYNVMGVAKAALEASVRYLA 174

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG---GMYS-NLKGAVLEP----EDAA 218
            + G  GIRVN +S   V T        LA  G+G    ++S   + + L      ++  
Sbjct: 175 ADYGPQGIRVNAISAGPVRT--------LAGAGIGDARAIFSYQQRNSPLRRTVTIDEVG 226

Query: 219 EAALYLGSDESKCVSGHNLVVDGGFAIV 246
            +ALYL SD S  V+G    VD G+ IV
Sbjct: 227 GSALYLLSDLSSGVTGEIHFVDSGYNIV 254

Length = 271

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 6/85 (7%)

Query: 166 AVELGRFGIRVNCVSPYAVSTPLA---KDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL 222
           A ELG  GIRV+ +SP  + T  A    DF  L +D      + L+  V + +D    A 
Sbjct: 177 AAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAE--RAPLRRLV-DIDDVGAVAA 233

Query: 223 YLGSDESKCVSGHNLVVDGGFAIVN 247
           +L SD ++ ++G+ L +DGG+ IV 
Sbjct: 234 FLASDAARRLTGNTLYIDGGYHIVG 258

Length = 258

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 51/194 (26%), Positives = 72/194 (37%), Gaps = 34/194 (17%)

Query: 12  GKVALITGGARGIGECTARLFSKHG----AKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
            K  LITG   G G   A   ++ G    A V IA     L        G +        
Sbjct: 2   SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEA-ARRGLA------LR 54

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNI---LDNDQAEFER--IL 122
               D+T   D   A    V      D++ NNAG + E    +   ++  +  FE     
Sbjct: 55  VEKLDLTDAIDRAQAAEWDV------DVLLNNAG-IGEAGAVVDIPVELVRELFETNVFG 107

Query: 123 SINLVGAFLGRNMLL----------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            + L   F+ R M+            + G+I G  T AY +SKH L  + +    EL  F
Sbjct: 108 PLELTQGFV-RKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPF 166

Query: 173 GIRVNCVSPYAVST 186
           GI+V  V+P    T
Sbjct: 167 GIQVATVNPGPYLT 180

Length = 257

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 32/196 (16%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKV--LIADI-----KDDLGESVCKDIGSSSSSASG 65
            V LITG + GIG   A   +   +K   + A +     K  L E+     G +  +   
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETL-- 58

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
                 DV   K +  AV         +D++  NAG V  + P +    +     +  +N
Sbjct: 59  ----QLDVCDSKSVAAAVER--VTERHVDVLVCNAG-VGLLGP-LEALSEDAMASVFDVN 110

Query: 126 LVG------AFL--------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           + G      AFL        GR ++   V G+ G      Y +SK  L GL ++ AV+L 
Sbjct: 111 VFGTVRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLL 170

Query: 171 RFGIRVNCVSPYAVST 186
            F + ++ +    V T
Sbjct: 171 PFNVHLSLIECGPVHT 186

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 43.3 bits (102), Expect = 6e-05
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 5/126 (3%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-GESVCKDIGSSSSSASGCSYVHC 71
              +ITG + G+G   A+  ++ G   ++   +D L  E   +++G    S    S +HC
Sbjct: 2   GTVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDS---YSVLHC 58

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           D+     +   V+        LD +  NA                 FE  + +N +G FL
Sbjct: 59  DLASLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADG-FELTVGVNHLGHFL 117

Query: 132 GRNMLL 137
             N+LL
Sbjct: 118 LTNLLL 123

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 48/204 (23%), Positives = 77/204 (37%), Gaps = 51/204 (25%)

Query: 12  GKVALITGGARGIG-ECTARLFSKHGAKVL--------IADIKDDLGESVCKDIGSSSSS 62
            K   ITG + G G   T RL ++ G +V         + D+K   G+ +   +      
Sbjct: 2   SKTWFITGASSGFGRGMTERLLAR-GDRVAATVRRPDALDDLKARYGDRL--WVLQ---- 54

Query: 63  ASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNA-----GTVDEVKPNILDNDQAE 117
                    DVT    +   V+ A    G++D++ +NA     G  +E+         A+
Sbjct: 55  --------LDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELS-------DAQ 99

Query: 118 FERILSINLVG------AFLGRNMLLGVCGII-----GGAATH----AYTSSKHGLLGLM 162
             R +  NL+G      A L      G   I+     GG   +     Y ++K G+ G +
Sbjct: 100 IRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFV 159

Query: 163 KNTAVELGRFGIRVNCVSPYAVST 186
           +  A E+  FGI    V P    T
Sbjct: 160 EAVAQEVAPFGIEFTIVEPGPART 183

Length = 276

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 3/91 (3%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVH- 70
           G+  LITG   GIG+  A   +K G  V +        E   K+I + S + +   ++H 
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQN--IFLHI 58

Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAG 101
            D++  K +   V     +  KL ++ NNAG
Sbjct: 59  VDMSDPKQVWEFVEEFKEEGKKLHVLINNAG 89

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 71/264 (26%), Positives = 107/264 (40%), Gaps = 51/264 (19%)

Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           L GK  ++ G A  R I    A+     GA V+     D + +S+ K +           
Sbjct: 5   LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDL------ 58

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLD-----IMFNNAGTVDEVKPNILDNDQAEF---E 119
            V CDV  ++ IE A  T   + GK+D     I +      +E+  N+ D  +  +   +
Sbjct: 59  LVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKK---EELGGNVTDTSRDGYALAQ 115

Query: 120 RILSINLVG-AFLGRNMLLGVCGIIGGAATHAYTSS-------------KHGLLGLMKNT 165
            I + +L+  A   R +L     I+    T  Y  S             K  L   ++  
Sbjct: 116 DISAYSLIAVAKYARPLLNPGASIV----TLTYFGSERAIPNYNVMGIAKAALESSVRYL 171

Query: 166 AVELGRFGIRVNCVSPYAVSTPLA-------KDFLKLADDGLGGMYSNLKGAVLEPEDAA 218
           A +LG+ GIRVN +S  AV T LA       KD LK +D         + G  +  E+  
Sbjct: 172 ARDLGKKGIRVNAISAGAVKT-LAVTGIKGHKDLLKESDS------RTVDGVGVTIEEVG 224

Query: 219 EAALYLGSDESKCVSGHNLVVDGG 242
             A +L SD S  V+G  + VD G
Sbjct: 225 NTAAFLLSDLSTGVTGDIIYVDKG 248

Length = 252

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 23/129 (17%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSAS------- 64
           GKV +ITG   GIG  TAR F+ HGA V++A          C+++  +S++ S       
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILA----------CRNMSRASAAVSRILEEWH 50

Query: 65  --GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL 122
                 +  D+   + ++        +   L ++  NA       P  L  D    E   
Sbjct: 51  KARVEAMTLDLASLRSVQRFAEAFKAKNSPLHVLVCNAAVF--ALPWTLTEDG--LETTF 106

Query: 123 SINLVGAFL 131
            +N +G F 
Sbjct: 107 QVNHLGHFY 115

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 61/266 (22%), Positives = 109/266 (40%), Gaps = 39/266 (14%)

Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           ++GK  LI G A  + I    A+   + GA++    + + L + V        +   G  
Sbjct: 3   MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRV-----EPIAQELGSD 57

Query: 68  YVH-CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTV--DEVKPNILDNDQAEFERILSI 124
           YV+  DV+K +  ++   +     GK+D + ++      + ++ + L+  +  F   + I
Sbjct: 58  YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEI 117

Query: 125 NLVGAFLGRNMLLGVCGIIGGAATHAYTSS-----KHGLLGLMKNT--------AVELGR 171
           ++         LL +        T +Y         + ++G+ K          AV+LG+
Sbjct: 118 SVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGK 177

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEP-------EDAAEAALY 223
            GIRVN +S   + T        LA  G+G     LK   +  P       E+   + +Y
Sbjct: 178 KGIRVNAISAGPIKT--------LAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMY 229

Query: 224 LGSDESKCVSGHNLVVDGGFAIVNAG 249
           L SD S  V+G    VD G+ I+  G
Sbjct: 230 LLSDLSSGVTGEIHYVDAGYNIMGMG 255

Length = 274

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 43/243 (17%), Positives = 79/243 (32%), Gaps = 49/243 (20%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
            +V L+ GG   +G    + F   G  V   D+ +             +  A     V  
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVASIDLAE-------------NEEADASIIVLD 47

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERILSINL 126
             +  +  +  V +     GK+D +   AG     +          +    ++ +   NL
Sbjct: 48  SDSFTEQAKQVVASVARLSGKVDALICVAGGWAGGSAKS------KSFVKNWDLMWKQNL 101

Query: 127 VGAFL------------GRNMLLGVCGIIGGAATH-AYTSSKHGLLGLMKNTAVELG--R 171
             +F+            G  +L G    +        Y ++K  +  L ++ A E     
Sbjct: 102 WTSFIASHLATKHLLSGGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLP 161

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC 231
            G   N + P  + TP  +  +  AD      +S+        E  AE  L+  S  ++ 
Sbjct: 162 AGSTANAILPVTLDTPANRKAMPDAD------FSSW----TPLEFIAELILFWASGAARP 211

Query: 232 VSG 234
            SG
Sbjct: 212 KSG 214

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 69/264 (26%), Positives = 106/264 (40%), Gaps = 41/264 (15%)

Query: 10  LQGKVALITG--GARGIGECTARLFSKHGAKVLIADIKDDLGESVCK---DIGSSSSSAS 64
           LQGK  LITG    R I    A+   + GA++    + D L E V K   ++ S      
Sbjct: 4   LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSEL---- 59

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTV--DEVKPNILDNDQAE-FERI 121
                 CDV  + +I          +  LD + ++ G    + +  + LD+   E F   
Sbjct: 60  ---VFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTA 116

Query: 122 LSINLVG----AFLGRNMLLGVCGIIGGAATHAYTSS-----KHGLLGLMKN-------- 164
             I+       A   R M+ G    I      +Y  +      + ++G+ K         
Sbjct: 117 HEISAYSLPALAKAARPMMRGRNSAI---VALSYLGAVRAIPNYNVMGMAKASLEAGIRF 173

Query: 165 TAVELGRFGIRVNCVSPYAVSTPLAK---DFLKLADDGLGGMYSNLKGAVLEPEDAAEAA 221
           TA  LG+ GIR N +S   + T  A    DF KL   G    ++ L+  V   E+    A
Sbjct: 174 TAACLGKEGIRCNGISAGPIKTLAASGIADFGKLL--GHVAAHNPLRRNV-TIEEVGNTA 230

Query: 222 LYLGSDESKCVSGHNLVVDGGFAI 245
            +L SD S  ++G    VDGG++I
Sbjct: 231 AFLLSDLSSGITGEITYVDGGYSI 254

Length = 261

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 38.7 bits (91), Expect = 0.001
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 13/114 (11%)

Query: 16  LITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSS----SASGCS--YV 69
           L+TGG  G+G   AR  ++ GA+ L+      L  S   D  + +      A G     V
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVL-----LSRSGAPDPEAEALLAELEARGAEVTVV 58

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILS 123
            CDV+    +   +         L  + + AG + +    + +    +F R+L+
Sbjct: 59  ACDVSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDAL--LANMTAEDFARVLA 110

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 38.6 bits (91), Expect = 0.001
 Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 21/121 (17%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLI--------ADIKDDLGESVCKDIGSSSSSAS 64
              LITGG  G+G   AR  ++ GA+ L+        A     L   +          A+
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAEL---------EAA 51

Query: 65  GCS--YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL 122
           G     V CDV     +   +       G L  + + AG +D+    +       F  +L
Sbjct: 52  GARVTVVACDVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDG--VLASLTPERFAAVL 109

Query: 123 S 123
           +
Sbjct: 110 A 110

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 6/96 (6%)

Query: 13  KVALITGGARGIGECTA-RLFS----KHGAKVLIADIKDDLGESVCKDIGSSSSSAS-GC 66
           KV L+TG   G+G     RL +         +++A       E+ C+ + +S   A    
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVF 61

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGT 102
            YV  D++    +  A      +Y +LD ++ NAG 
Sbjct: 62  DYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGI 97

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 34/148 (22%), Positives = 56/148 (37%), Gaps = 19/148 (12%)

Query: 92  KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF--------------LGRNMLL 137
           + D++ +NA  +D+ +   L   + E  R +  N+VG                LGR +L+
Sbjct: 31  RRDVVVHNAAILDDGRLIDLTGSRIE--RAIRANVVGTRRLLEAARELMKAKRLGRFILI 88

Query: 138 G-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA 196
             V G+ G      Y +SK  L GL +  A E    G+    V+    +           
Sbjct: 89  SSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTWAGSGMAKGPVAP 148

Query: 197 DDGLGGMYSNLKGAVLEPEDAAEAALYL 224
           ++ LG          + PE+ A A L  
Sbjct: 149 EEILGN--RRHGVRTMPPEEVARALLNA 174

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 37.2 bits (86), Expect = 0.004
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 16/88 (18%)

Query: 166 AVELGRFGIRVNCVSPYAVSTPLA---KDFLKLADDGLGGMYSNLKGA-----VLEPEDA 217
           A  +G  G+RVN +S   + T  A   KDF K        M ++ +        +  ED 
Sbjct: 174 ANAMGPEGVRVNAISAGPIRTLAASGIKDFRK--------MLAHCEAVTPIRRTVTIEDV 225

Query: 218 AEAALYLGSDESKCVSGHNLVVDGGFAI 245
             +A +L SD S  +SG  + VDGGF+I
Sbjct: 226 GNSAAFLCSDLSAGISGEVVHVDGGFSI 253

Length = 262

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	257
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK08643	256	acetoin reductase; Validated	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK05993	277	short chain dehydrogenase; Provisional	99.98
PRK08263	275	short chain dehydrogenase; Provisional	99.98
PRK05855	582	short chain dehydrogenase; Validated	99.98
PRK05866	293	short chain dehydrogenase; Provisional	99.98
PRK06924	251	short chain dehydrogenase; Provisional	99.98
PRK07806	248	short chain dehydrogenase; Provisional	99.98
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.98
PRK05650	270	short chain dehydrogenase; Provisional	99.98
PRK08324	681	short chain dehydrogenase; Validated	99.98
PRK09072	263	short chain dehydrogenase; Provisional	99.97
PRK05854	313	short chain dehydrogenase; Provisional	99.97
PRK06914	280	short chain dehydrogenase; Provisional	99.97
COG1028	251	FabG Dehydrogenases with different specificities (	99.97
PRK06180	277	short chain dehydrogenase; Provisional	99.97
PRK10538	248	malonic semialdehyde reductase; Provisional	99.97
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.97
PRK07904	253	short chain dehydrogenase; Provisional	99.97
PRK06194	287	hypothetical protein; Provisional	99.97
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06197	306	short chain dehydrogenase; Provisional	99.97
PRK07775	274	short chain dehydrogenase; Provisional	99.97
PRK08267	260	short chain dehydrogenase; Provisional	99.97
PRK06179	270	short chain dehydrogenase; Provisional	99.97
PRK08251	248	short chain dehydrogenase; Provisional	99.97
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.97
PRK06181	263	short chain dehydrogenase; Provisional	99.97
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.97
PRK05693	274	short chain dehydrogenase; Provisional	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.97
PRK07102	243	short chain dehydrogenase; Provisional	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
KOG1208	314	consensus Dehydrogenases with different specificit	99.96
PRK06482	276	short chain dehydrogenase; Provisional	99.96
PRK06101	240	short chain dehydrogenase; Provisional	99.96
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.96
PRK07201	657	short chain dehydrogenase; Provisional	99.96
PRK07023	243	short chain dehydrogenase; Provisional	99.96
PRK08177	225	short chain dehydrogenase; Provisional	99.96
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.96
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.96
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.96
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.95
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.95
PRK08264	238	short chain dehydrogenase; Validated	99.95
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.95
PRK08017	256	oxidoreductase; Provisional	99.95
PRK09291	257	short chain dehydrogenase; Provisional	99.95
PRK06953	222	short chain dehydrogenase; Provisional	99.95
PRK12367	245	short chain dehydrogenase; Provisional	99.94
PRK08219	227	short chain dehydrogenase; Provisional	99.94
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.92
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.91
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.91
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.89
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.88
PLN03209	576	translocon at the inner envelope of chloroplast su	99.86
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.86
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.86
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.83
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.83
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.82
PLN02653	340	GDP-mannose 4,6-dehydratase	99.82
PRK06720	169	hypothetical protein; Provisional	99.8
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.8
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.78
PLN02572	442	UDP-sulfoquinovose synthase	99.78
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.77
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.76
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.76
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.76
PLN02240	352	UDP-glucose 4-epimerase	99.75
PLN02650	351	dihydroflavonol-4-reductase	99.74
PLN02214	342	cinnamoyl-CoA reductase	99.74
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.74
PLN02583	297	cinnamoyl-CoA reductase	99.73
PLN00198	338	anthocyanidin reductase; Provisional	99.73
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.72
PLN02686	367	cinnamoyl-CoA reductase	99.71
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.71
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.71
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.7
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.69
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.68
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.68
PLN02427	386	UDP-apiose/xylose synthase	99.67
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.66
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.66
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.65
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.65
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.63
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.63
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.62
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.61
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.61
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.61
PLN02260	668	probable rhamnose biosynthetic enzyme	99.6
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.59
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.58
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.54
CHL00194	317	ycf39 Ycf39; Provisional	99.54
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.52
PLN02206	442	UDP-glucuronate decarboxylase	99.51
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.49
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.48
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.48
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.45
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.45
PRK07201	657	short chain dehydrogenase; Provisional	99.43
PLN02996	491	fatty acyl-CoA reductase	99.42
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.41
PRK05865	854	hypothetical protein; Provisional	99.37
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.36
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.35
PRK08309	177	short chain dehydrogenase; Provisional	99.3
PLN02778	298	3,5-epimerase/4-reductase	99.29
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.28
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.28
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.27
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.27
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.26
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.15
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.14
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.14
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.13
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.11
PLN02503	605	fatty acyl-CoA reductase 2	99.08
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.07
PLN00016	378	RNA-binding protein; Provisional	99.05
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.04
PLN02260	668	probable rhamnose biosynthetic enzyme	99.04
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.96
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.88
PRK12320	699	hypothetical protein; Provisional	98.86
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.85
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.82
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.8
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.79
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.76
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.61
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.59
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.59
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.57
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.54
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.5
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.39
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.33
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.3
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.27
PRK09620	229	hypothetical protein; Provisional	98.2
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.19
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.19
PRK14982	340	acyl-ACP reductase; Provisional	98.18
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.97
COG2910	211	Putative NADH-flavin reductase [General function p	97.93
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.84
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.82
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.75
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.75
KOG2774	366	consensus NAD dependent epimerase [General functio	97.73
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.73
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.67
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.57
PLN00106	323	malate dehydrogenase	97.55
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.54
PRK06849	389	hypothetical protein; Provisional	97.52
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.52
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.46
COG3268	382	Uncharacterized conserved protein [Function unknow	97.45
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.45
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.44
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.44
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.39
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.38
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.37
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.37
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.37
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.36
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.34
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.34
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.31
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.31
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.3
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.3
PTZ00325	321	malate dehydrogenase; Provisional	97.26
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.25
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.25
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.24
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.23
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.19
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.18
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	97.17
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.17
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.14
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.1
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.1
PRK04148	134	hypothetical protein; Provisional	97.07
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.05
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.01
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.01
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.0
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.97
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.95
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.94
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.94
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.94
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.92
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.91
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.9
PRK09496	453	trkA potassium transporter peripheral membrane com	96.89
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.89
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.89
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.88
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.88
PLN00203	519	glutamyl-tRNA reductase	96.87
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.87
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.86
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.84
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.84
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.84
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.78
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.76
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.75
PRK08223	287	hypothetical protein; Validated	96.74
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.73
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.72
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.69
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.66
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.63
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.62
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.62
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.59
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.59
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.59
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.56
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.56
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.55
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.46
PRK08655	437	prephenate dehydrogenase; Provisional	96.45
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.41
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.39
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.39
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	96.39
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.36
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	96.36
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.36
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.34
PLN02740	381	Alcohol dehydrogenase-like	96.33
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.32
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.3
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.28
PLN02178	375	cinnamyl-alcohol dehydrogenase	96.28
PTZ00354	334	alcohol dehydrogenase; Provisional	96.26
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.26
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.25
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	96.2
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.18
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.17
PRK05086	312	malate dehydrogenase; Provisional	96.16
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.15
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.12
PRK09496	453	trkA potassium transporter peripheral membrane com	96.12
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.11
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	96.11
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	96.09
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	96.09
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.09
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	96.09
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	96.09
PRK14851	679	hypothetical protein; Provisional	96.08
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.07
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	96.07
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.07
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.07
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.04
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	96.04
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	96.04
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	96.03
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.02
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.0
PRK07877	722	hypothetical protein; Provisional	95.99
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.95
PLN02494	477	adenosylhomocysteinase	95.95
PRK12480	330	D-lactate dehydrogenase; Provisional	95.93
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	95.92
PRK08328	231	hypothetical protein; Provisional	95.92
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	95.89
PRK07411	390	hypothetical protein; Validated	95.88
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.88
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	95.86
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	95.85
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.85
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.84
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.84
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	95.84
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	95.83
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.82
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	95.82
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	95.81
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.8
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.8
PLN02827	378	Alcohol dehydrogenase-like	95.79
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.78
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.76
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	95.75
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.74
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.73
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.73
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	95.72
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.72
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	95.68
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.66
PLN02928	347	oxidoreductase family protein	95.66
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.64
PRK13771	334	putative alcohol dehydrogenase; Provisional	95.62
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.61
PRK10669	558	putative cation:proton antiport protein; Provision	95.6
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	95.59
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.57
PRK14852	989	hypothetical protein; Provisional	95.56
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.53
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	95.53
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.51
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	95.5
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.5
PRK00048	257	dihydrodipicolinate reductase; Provisional	95.46
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	95.45
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	95.45
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	95.45
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	95.44
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.44
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.43
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.41
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	95.38
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	95.38
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.38
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	95.37
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	95.37
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	95.36
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	95.35
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.33

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=1.6e-45  Score=277.99  Aligned_cols=228  Identities=34%  Similarity=0.556  Sum_probs=203.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+..|.++|||+++|||+++++.|+++|++|++.+++....+++...+...+    +-..+.||++++++++..+++..+
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~----~h~aF~~DVS~a~~v~~~l~e~~k   86 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG----DHSAFSCDVSKAHDVQNTLEEMEK   86 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC----ccceeeeccCcHHHHHHHHHHHHH
Confidence            4667999999999999999999999999999999999988888877775432    256799999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------------HhhhccccCCCCchh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------------~s~~~~~~~~~~~~y  151 (257)
                      .+|+|++||||||+..+  ..+.....++|++.+.+|+.+.|+..+++                 +|+.+..+.-++..|
T Consensus        87 ~~g~psvlVncAGItrD--~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnY  164 (256)
T KOG1200|consen   87 SLGTPSVLVNCAGITRD--GLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNY  164 (256)
T ss_pred             hcCCCcEEEEcCccccc--cceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhh
Confidence            99999999999999876  77888999999999999999999987766                 577888889999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +++|+.+.+|+|++++|++++|||||.|.||++.|||+....+....   .+. -.|.+|++.+||+|..++||+|+.++
T Consensus       165 AAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~---ki~~~iPmgr~G~~EevA~~V~fLAS~~ss  241 (256)
T KOG1200|consen  165 AASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLD---KILGMIPMGRLGEAEEVANLVLFLASDASS  241 (256)
T ss_pred             hhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHH---HHHccCCccccCCHHHHHHHHHHHhccccc
Confidence            99999999999999999999999999999999999999876543221   222 46778999999999999999999999


Q ss_pred             cccccEEEecCceee
Q 044485          231 CVSGHNLVVDGGFAI  245 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~  245 (257)
                      |++|+++.++||+.+
T Consensus       242 YiTG~t~evtGGl~m  256 (256)
T KOG1200|consen  242 YITGTTLEVTGGLAM  256 (256)
T ss_pred             cccceeEEEeccccC
Confidence            999999999999864

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3e-43  Score=290.51  Aligned_cols=233  Identities=24%  Similarity=0.243  Sum_probs=190.0

Q ss_pred             cccccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         6 ~~~~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      |...+++|+++||||+  +|||+++|++|+++|++|++++|+. ..++..+++..     .++..+++|++|++++++++
T Consensus         1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~-----~~~~~~~~Dl~~~~~v~~~~   74 (252)
T PRK06079          1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVD-----EEDLLVECDVASDESIERAF   74 (252)
T ss_pred             CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhcc-----CceeEEeCCCCCHHHHHHHH
Confidence            4456789999999999  7999999999999999999999984 34444444421     23788999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhccccCCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEV--KPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCGIIGGAAT  148 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~~~~~~~  148 (257)
                      +++.+.++++|+||||||...+.  ..++.+.+.++|++.+++|+.+++.+.+.+.+             ..+..+.+..
T Consensus        75 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~  154 (252)
T PRK06079         75 ATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNY  154 (252)
T ss_pred             HHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcc
Confidence            99999999999999999976431  24678899999999999999999998777743             2334455667


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ..|++||+|+.+|+|+++.|++++|||||+|+||+++|++....... ++...... ..|.+++.+|+|+|+.+.||+++
T Consensus       155 ~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~-~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~  233 (252)
T PRK06079        155 NVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGH-KDLLKESDSRTVDGVGVTIEEVGNTAAFLLSD  233 (252)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCCh-HHHHHHHHhcCcccCCCCHHHHHHHHHHHhCc
Confidence            78999999999999999999999999999999999999975432110 00001111 34567889999999999999999


Q ss_pred             CCCcccccEEEecCceee
Q 044485          228 ESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~  245 (257)
                      .+.+++|+++.+|||..+
T Consensus       234 ~~~~itG~~i~vdgg~~~  251 (252)
T PRK06079        234 LSTGVTGDIIYVDKGVHL  251 (252)
T ss_pred             ccccccccEEEeCCceec
Confidence            999999999999999765

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-42  Score=287.26  Aligned_cols=234  Identities=25%  Similarity=0.329  Sum_probs=195.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+  .++.++.+|++|+++++++++++.
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~   81 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESN--VDVSYIVADLTKREDLERTVKELK   81 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--CceEEEEecCCCHHHHHHHHHHHH
Confidence            358899999999999999999999999999999999998888888777754322  347899999999999999999986


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                       .+|++|++|||+|....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|+
T Consensus        82 -~~g~iD~lv~nag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~  158 (263)
T PRK08339         82 -NIGEPDIFFFSTGGPKP--GYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSN  158 (263)
T ss_pred             -hhCCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhH
Confidence             58999999999997654  678899999999999999999999877663               333444556677899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh--------hccccCcc-ccccCCCCCHHHHHHHHHH
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA--------DDGLGGMY-SNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~~a~~~~~  223 (257)
                      ++|+|+++|+|+++.|++++|||||+|+||+++|++........        ++....+. ..|.+++..|+|+|+.++|
T Consensus       159 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~f  238 (263)
T PRK08339        159 VVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAF  238 (263)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999865432100        01111111 3567889999999999999


Q ss_pred             hcCCCCCcccccEEEecCceeee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      |+++.+.+++|+++.+|||...+
T Consensus       239 L~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        239 LASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HhcchhcCccCceEEECCCcccc
Confidence            99999999999999999998654

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=2.1e-42  Score=285.82  Aligned_cols=244  Identities=39%  Similarity=0.569  Sum_probs=201.9

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ++..+.+|++||||+++|||+++|++|++.|++|++++|+++.++++.+++......+.++..+.||+++.+++++++++
T Consensus         2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999999998888776555556689999999999999999999


Q ss_pred             HHHH-cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchh-hhHHHHHH---------------HhhhccccCCCC
Q 044485           86 AVTQ-YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG-AFLGRNML---------------LGVCGIIGGAAT  148 (257)
Q Consensus        86 ~~~~-~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~l~~~~---------------~s~~~~~~~~~~  148 (257)
                      ..+. +|++|+||||||..... .++.+.+.|+|++.+++|+++ .+.+.+..               ++..+..+....
T Consensus        82 ~~~~~~GkidiLvnnag~~~~~-~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~  160 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALGLT-GSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGS  160 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCCCC-CChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCC
Confidence            9998 69999999999988653 379999999999999999995 55554444               233344443444


Q ss_pred             -chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh--hhcccc---CccccccCCCCCHHHHHHHHH
Q 044485          149 -HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL--ADDGLG---GMYSNLKGAVLEPEDAAEAAL  222 (257)
Q Consensus       149 -~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~a~~~~  222 (257)
                       ..|+++|+|+++|+|+++.|++++|||||+|.||.+.|++.......  ......   .....|.+++..|+|+++.+.
T Consensus       161 ~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~  240 (270)
T KOG0725|consen  161 GVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAA  240 (270)
T ss_pred             cccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHH
Confidence             79999999999999999999999999999999999999972111000  011111   112457899999999999999


Q ss_pred             HhcCCCCCcccccEEEecCceeeeecce
Q 044485          223 YLGSDESKCVSGHNLVVDGGFAIVNAGF  250 (257)
Q Consensus       223 ~l~s~~~~~~~G~~~~~dgG~~~~~~~~  250 (257)
                      ||+++.+.|++|+.+.+|||.++....+
T Consensus       241 fla~~~asyitG~~i~vdgG~~~~~~~~  268 (270)
T KOG0725|consen  241 FLASDDASYITGQTIIVDGGFTVVGPSL  268 (270)
T ss_pred             hhcCcccccccCCEEEEeCCEEeecccc
Confidence            9999997799999999999999976544

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.2e-42  Score=288.13  Aligned_cols=234  Identities=24%  Similarity=0.239  Sum_probs=186.3

Q ss_pred             ccCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGAR--GIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .+++|++|||||++  |||+++|++|+++|++|++++|+....++..+.....+   . ...+++|++|+++++.+++++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g---~-~~~~~~Dv~d~~~v~~~~~~~   79 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLG---S-DFVLPCDVEDIASVDAVFEAL   79 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcC---C-ceEEeCCCCCHHHHHHHHHHH
Confidence            46789999999997  99999999999999999999987643333322222221   1 357899999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEV--KPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y  151 (257)
                      .+.+|++|+||||||.....  ..++.+.+.++|++.+++|+.+++.+.+.+.             |..+..+.+.+..|
T Consensus        80 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y  159 (271)
T PRK06505         80 EKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVM  159 (271)
T ss_pred             HHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccchh
Confidence            99999999999999976421  1367789999999999999999999877663             22334455667789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      ++||+|+.+|+|+|+.|++++|||||+|+||+++|++....... ....... ...|.+++.+|+|+|+.++||+++.+.
T Consensus       160 ~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~-~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~  238 (271)
T PRK06505        160 GVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDA-RAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSS  238 (271)
T ss_pred             hhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcch-HHHHHHHhhcCCccccCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999999875322110 0000000 134567889999999999999999999


Q ss_pred             cccccEEEecCceeeee
Q 044485          231 CVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~~  247 (257)
                      +++|+.+.+|||..+..
T Consensus       239 ~itG~~i~vdgG~~~~~  255 (271)
T PRK06505        239 GVTGEIHFVDSGYNIVS  255 (271)
T ss_pred             ccCceEEeecCCcccCC
Confidence            99999999999987553

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.3e-42  Score=284.31  Aligned_cols=234  Identities=25%  Similarity=0.240  Sum_probs=187.5

Q ss_pred             ccCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGAR--GIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .+++|++|||||++  |||+++|++|+++|++|++++|+. ..++..+++....+  . ..++++|++|+++++++++++
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g--~-~~~~~~Dv~~~~~v~~~~~~~   80 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIG--C-NFVSELDVTNPKSISNLFDDI   80 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcC--C-ceEEEccCCCHHHHHHHHHHH
Confidence            46789999999997  999999999999999999999874 33334444432211  1 346789999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEV--KPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y  151 (257)
                      .+.+|++|+||||||.....  ..++.+.+.++|++.+++|+.+++.+.+.+.             |..+..+.+....|
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y  160 (260)
T PRK06603         81 KEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVM  160 (260)
T ss_pred             HHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccch
Confidence            99999999999999975421  2467889999999999999999999877653             23344455667899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      ++||+|+.+|+|+|+.|++++|||||+|+||+++|++....... ++...... ..|.+++..|+|+|++++||+++.+.
T Consensus       161 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~  239 (260)
T PRK06603        161 GVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDF-STMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSK  239 (260)
T ss_pred             hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCc-HHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999999975321110 00011111 34667889999999999999999999


Q ss_pred             cccccEEEecCceeeee
Q 044485          231 CVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~~  247 (257)
                      +++|+++.+|||+.+..
T Consensus       240 ~itG~~i~vdgG~~~~~  256 (260)
T PRK06603        240 GVTGEIHYVDCGYNIMG  256 (260)
T ss_pred             cCcceEEEeCCcccccC
Confidence            99999999999987753

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.5e-42  Score=283.27  Aligned_cols=234  Identities=23%  Similarity=0.257  Sum_probs=190.1

Q ss_pred             cccccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcc---hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHH
Q 044485            6 MLRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKD---DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIE   80 (257)
Q Consensus         6 ~~~~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~   80 (257)
                      |++++.+|+++||||+  +|||+++|++|+++|++|++++|+.   +.++++.++++     +.++.++++|++|+++++
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~   75 (257)
T PRK08594          1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE-----GQESLLLPCDVTSDEEIT   75 (257)
T ss_pred             CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC-----CCceEEEecCCCCHHHHH
Confidence            5668899999999997  8999999999999999999998753   33444444442     134788999999999999


Q ss_pred             HHHHHHHHHcCCccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccC
Q 044485           81 NAVNTAVTQYGKLDIMFNNAGTVDE--VKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGG  145 (257)
Q Consensus        81 ~~~~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~  145 (257)
                      ++++++.+.+|++|++|||||+...  ...++.+.+.++|.+.+++|+.+++.+.+.+.             |..+..+.
T Consensus        76 ~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~  155 (257)
T PRK08594         76 ACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVV  155 (257)
T ss_pred             HHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCC
Confidence            9999999999999999999997532  12467788999999999999999998876653             33444556


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHh
Q 044485          146 AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       146 ~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l  224 (257)
                      +....|++||+|+++|+|+++.|++++|||||+|+||+++|++.+..... ++...... ..|.+++.+|+|+++.++||
T Consensus       156 ~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~p~~r~~~p~~va~~~~~l  234 (257)
T PRK08594        156 QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGF-NSILKEIEERAPLRRTTTQEEVGDTAAFL  234 (257)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccc-cHHHHHHhhcCCccccCCHHHHHHHHHHH
Confidence            67789999999999999999999999999999999999999975432110 01011111 23567789999999999999


Q ss_pred             cCCCCCcccccEEEecCceee
Q 044485          225 GSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       225 ~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      +++.+.+++|+++.+|||..+
T Consensus       235 ~s~~~~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        235 FSDLSRGVTGENIHVDSGYHI  255 (257)
T ss_pred             cCcccccccceEEEECCchhc
Confidence            999999999999999999765

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-41  Score=282.09  Aligned_cols=238  Identities=31%  Similarity=0.494  Sum_probs=199.1

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |+.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++..... ..++.++.+|++|++++++++++
T Consensus         1 ~~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~   79 (260)
T PRK07063          1 MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVA-GARVLAVPADVTDAASVAAAVAA   79 (260)
T ss_pred             CCcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccC-CceEEEEEccCCCHHHHHHHHHH
Confidence            45678899999999999999999999999999999999999888888877754211 23478999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~  150 (257)
                      +.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....
T Consensus        80 ~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  157 (260)
T PRK07063         80 AEEAFGPLDVLVNNAGINVF--ADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFP  157 (260)
T ss_pred             HHHHhCCCcEEEECCCcCCC--CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchH
Confidence            99999999999999997644  456678899999999999999999877663               3334455666778


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc---cccCc-cccccCCCCCHHHHHHHHHHhcC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD---GLGGM-YSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      |+++|+|+++|+|+++.|++++|||||+|+||+++|++..........   ..... ...|.+++.+|+|+|+.++||++
T Consensus       158 Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s  237 (260)
T PRK07063        158 YPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLAS  237 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999999987643221100   01111 13466789999999999999999


Q ss_pred             CCCCcccccEEEecCceeee
Q 044485          227 DESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +.+.+++|+.+.+|||..+.
T Consensus       238 ~~~~~itG~~i~vdgg~~~~  257 (260)
T PRK07063        238 DEAPFINATCITIDGGRSVL  257 (260)
T ss_pred             ccccccCCcEEEECCCeeee
Confidence            99999999999999998765

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-42  Score=282.13  Aligned_cols=229  Identities=27%  Similarity=0.443  Sum_probs=189.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||++++++|+++|++|++++|+..  ++..++++..+   .++.++.+|++++++++++++++.
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~   78 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALG---RKFHFITADLIQQKDIDSIVSQAV   78 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcC---CeEEEEEeCCCCHHHHHHHHHHHH
Confidence            3688999999999999999999999999999999988643  33334443322   348899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhccccCCCCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~~~~~~~y  151 (257)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.+                ..+..+.+....|
T Consensus        79 ~~~g~iD~lv~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y  156 (251)
T PRK12481         79 EVMGHIDILINNAGIIRR--QDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSY  156 (251)
T ss_pred             HHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcch
Confidence            999999999999998754  6688899999999999999999988766532                3333445667789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      ++||+|+++|+|.++.|++++|||||+|+||+++|++....... +...... ...|.+++.+|+|+|+.+.||+++.+.
T Consensus       157 ~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~  235 (251)
T PRK12481        157 TASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRAD-TARNEAILERIPASRWGTPDDLAGPAIFLSSSASD  235 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccC-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999999986543211 1111111 134667889999999999999999999


Q ss_pred             cccccEEEecCcee
Q 044485          231 CVSGHNLVVDGGFA  244 (257)
Q Consensus       231 ~~~G~~~~~dgG~~  244 (257)
                      +++|+.+.+|||+.
T Consensus       236 ~~~G~~i~vdgg~~  249 (251)
T PRK12481        236 YVTGYTLAVDGGWL  249 (251)
T ss_pred             CcCCceEEECCCEe
Confidence            99999999999975

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=5.7e-42  Score=283.81  Aligned_cols=236  Identities=23%  Similarity=0.286  Sum_probs=190.3

Q ss_pred             cccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcch--hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            8 RRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDD--LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         8 ~~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      +++.+|+++||||+  +|||+++|++|+++|++|++++|+.+  ..++..+++....   .++.++++|++|++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~d~~~v~~~~   78 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL---NPSLFLPCDVQDDAQIEETF   78 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc---CcceEeecCcCCHHHHHHHH
Confidence            36789999999986  89999999999999999998876543  2344444453322   13678999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhccccCCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDE--VKPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCGIIGGAAT  148 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~~~~~~~  148 (257)
                      +++.+.+|++|+||||||....  ...++.+.+.++|++.+++|+.+++.+.+.+.+             ..+..+.+..
T Consensus        79 ~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~  158 (258)
T PRK07370         79 ETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNY  158 (258)
T ss_pred             HHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCccc
Confidence            9999999999999999997532  124678899999999999999999999777643             3344456677


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ..|++||+|+.+|+|+|+.|++++||+||+|+||+++|++.+..... ++...... ..|.+++..|+|+++.+.||+++
T Consensus       159 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~-~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~  237 (258)
T PRK07370        159 NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGI-LDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSD  237 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccc-hhhhhhhhhcCCcCcCCCHHHHHHHHHHHhCh
Confidence            88999999999999999999999999999999999999976432110 11111111 34567889999999999999999


Q ss_pred             CCCcccccEEEecCceeeee
Q 044485          228 ESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~~~  247 (257)
                      .+.+++|+++.+|||..+.+
T Consensus       238 ~~~~~tG~~i~vdgg~~~~~  257 (258)
T PRK07370        238 LASGITGQTIYVDAGYCIMG  257 (258)
T ss_pred             hhccccCcEEEECCcccccC
Confidence            99999999999999987653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.6e-42  Score=285.19  Aligned_cols=233  Identities=22%  Similarity=0.278  Sum_probs=186.2

Q ss_pred             ccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .+.+|++|||||+  +|||+++|++|+++|++|++++|+.+. ++..+++....+  .. .++++|++|+++++++++++
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~-~~~~~~~~~~~~--~~-~~~~~Dv~d~~~v~~~~~~i   77 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL-KKRVEPIAQELG--SD-YVYELDVSKPEHFKSLAESL   77 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH-HHHHHHHHHhcC--Cc-eEEEecCCCHHHHHHHHHHH
Confidence            4678999999997  899999999999999999999998532 222232221111  12 57899999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEV--KPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~~~~~~~~~y  151 (257)
                      .+.+|++|+||||||+....  ..++.+.+.++|++++++|+.+++++.+.+.+             ..+..+.+.+..|
T Consensus        78 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~Y  157 (274)
T PRK08415         78 KKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVM  157 (274)
T ss_pred             HHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchhh
Confidence            99999999999999975421  24678899999999999999999999877743             3344455667789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccC-ccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGG-MYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      ++||+|+.+|+|+|+.|++++|||||+|+||+++|++....... ...... ....|.+++.+|+|+|+.++||+++.+.
T Consensus       158 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~~  236 (274)
T PRK08415        158 GVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDF-RMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSS  236 (274)
T ss_pred             hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchh-hHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhhh
Confidence            99999999999999999999999999999999999875422110 000000 0134667889999999999999999999


Q ss_pred             cccccEEEecCceeee
Q 044485          231 CVSGHNLVVDGGFAIV  246 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~  246 (257)
                      +++|+++.+|||..+.
T Consensus       237 ~itG~~i~vdGG~~~~  252 (274)
T PRK08415        237 GVTGEIHYVDAGYNIM  252 (274)
T ss_pred             cccccEEEEcCccccc
Confidence            9999999999998753

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9e-42  Score=283.09  Aligned_cols=234  Identities=22%  Similarity=0.233  Sum_probs=186.4

Q ss_pred             cccCCcEEEEecC--CCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            8 RRLQGKVALITGG--ARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         8 ~~~~~k~~lItGa--s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ..+++|++|||||  ++|||+++|++|+++|++|++++|+.. .++..+++....+   ....++||++|++++++++++
T Consensus         2 ~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~   77 (261)
T PRK08690          2 GFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-LEERVRKMAAELD---SELVFRCDVASDDEINQVFAD   77 (261)
T ss_pred             CccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-HHHHHHHHHhccC---CceEEECCCCCHHHHHHHHHH
Confidence            4578999999997  679999999999999999999988643 3333444432222   145789999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCC---CCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCC
Q 044485           86 AVTQYGKLDIMFNNAGTVDEV---KPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAAT  148 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~  148 (257)
                      +.+.++++|+||||||+....   ...+.+.+.++|++++++|+.+++++.+.+.              +..+..+.+.+
T Consensus        78 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~  157 (261)
T PRK08690         78 LGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNY  157 (261)
T ss_pred             HHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCc
Confidence            999999999999999986431   0124567889999999999999998876653              23344456777


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ..|+++|+|+.+|+|.++.|++++|||||+|+||+++|++....... ........ ..|.+++.+|+|+|+.++||+++
T Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~-~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~  236 (261)
T PRK08690        158 NVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADF-GKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSD  236 (261)
T ss_pred             ccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCch-HHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            89999999999999999999999999999999999999976432110 11111111 34678899999999999999999


Q ss_pred             CCCcccccEEEecCceeee
Q 044485          228 ESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~~  246 (257)
                      .+.+++|+.+.+|||..+.
T Consensus       237 ~~~~~tG~~i~vdgG~~~~  255 (261)
T PRK08690        237 LSSGITGEITYVDGGYSIN  255 (261)
T ss_pred             ccCCcceeEEEEcCCcccc
Confidence            9999999999999998764

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-41  Score=280.15  Aligned_cols=230  Identities=33%  Similarity=0.477  Sum_probs=193.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.+.++++.++++..+   .++..+.+|++|+++++++++++.
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSG---GKVVPVCCDVSQHQQVTSMLDQVT   81 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999988888887776543   247889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhccccC-C-CCc
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIGG-A-ATH  149 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~~-~-~~~  149 (257)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+..                ..+..+. + ...
T Consensus        82 ~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~  159 (253)
T PRK05867         82 AELGGIDIAVCNAGIITV--TPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVS  159 (253)
T ss_pred             HHhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCcc
Confidence            999999999999998654  5678889999999999999999998766532                1122221 2 346


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      .|+++|+|+++|+|++++|++++||+||+|+||+++|++.......... +.  ...+.+++.+|+|+|++++||+++.+
T Consensus       160 ~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~-~~--~~~~~~r~~~p~~va~~~~~L~s~~~  236 (253)
T PRK05867        160 HYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPL-WE--PKIPLGRLGRPEELAGLYLYLASEAS  236 (253)
T ss_pred             chHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHH-HH--hcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            8999999999999999999999999999999999999986543221111 11  13456788999999999999999999


Q ss_pred             CcccccEEEecCceee
Q 044485          230 KCVSGHNLVVDGGFAI  245 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~  245 (257)
                      .+++|+.+.+|||..+
T Consensus       237 ~~~tG~~i~vdgG~~~  252 (253)
T PRK05867        237 SYMTGSDIVIDGGYTC  252 (253)
T ss_pred             CCcCCCeEEECCCccC
Confidence            9999999999999754

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.5e-41  Score=285.36  Aligned_cols=247  Identities=19%  Similarity=0.193  Sum_probs=195.7

Q ss_pred             ccccccCCcEEEEecC--CCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccC----------CCCCCCceeEecC
Q 044485            5 LMLRRLQGKVALITGG--ARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSS----------SSSASGCSYVHCD   72 (257)
Q Consensus         5 ~~~~~~~~k~~lItGa--s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~----------~~~~~~v~~~~~D   72 (257)
                      .+.++++||++|||||  |+|||+++|+.|+++|++|++ +|+.+.++++..++...          +........+.+|
T Consensus         2 ~~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   80 (303)
T PLN02730          2 GLPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLD   80 (303)
T ss_pred             CCCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecc
Confidence            3556799999999999  899999999999999999998 78888887777666421          1011124678899


Q ss_pred             C--CC------------------HHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHH
Q 044485           73 V--TK------------------EKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG  132 (257)
Q Consensus        73 ~--~~------------------~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l  132 (257)
                      +  ++                  +++++++++++.+.+|++|+||||||.......++.+.+.++|++++++|+.+++.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l  160 (303)
T PLN02730         81 AVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSL  160 (303)
T ss_pred             eecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence            8  43                  448999999999999999999999986432236788999999999999999999999


Q ss_pred             HHHHHh-------------hhccccCCCC-chhhhhHHHHHHHHHHHHHHhcc-CCcEEEeecCCCccChhhHhHhhhhh
Q 044485          133 RNMLLG-------------VCGIIGGAAT-HAYTSSKHGLLGLMKNTAVELGR-FGIRVNCVSPYAVSTPLAKDFLKLAD  197 (257)
Q Consensus       133 ~~~~~s-------------~~~~~~~~~~-~~y~~sK~a~~~~~~~l~~e~~~-~gi~v~~i~pg~v~t~~~~~~~~~~~  197 (257)
                      .+.+.+             ..+..+.+.. ..|++||+|+++|+|+|+.|+++ +|||||+|+||+++|++.+.... .+
T Consensus       161 ~~~~~p~m~~~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~-~~  239 (303)
T PLN02730        161 LQHFGPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGF-ID  239 (303)
T ss_pred             HHHHHHHHhcCCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccc-cH
Confidence            877743             3344445544 47999999999999999999986 89999999999999998754210 01


Q ss_pred             ccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeeecceeec
Q 044485          198 DGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSVF  253 (257)
Q Consensus       198 ~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~~~~~~~  253 (257)
                      ...... ...|.+++..|+|++..++||+++.+.+++|+.+.+|||......+.+.+
T Consensus       240 ~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~g~~~~~~  296 (303)
T PLN02730        240 DMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMGLALDSP  296 (303)
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccccccCCCcc
Confidence            100000 12245678899999999999999999999999999999999988776654

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.2e-41  Score=280.00  Aligned_cols=235  Identities=25%  Similarity=0.257  Sum_probs=187.9

Q ss_pred             cccccCCcEEEEecC--CCchHHHHHHHHHHcCCeEEEeeCcc--hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHH
Q 044485            6 MLRRLQGKVALITGG--ARGIGECTARLFSKHGAKVLIADIKD--DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIEN   81 (257)
Q Consensus         6 ~~~~~~~k~~lItGa--s~giG~~ia~~l~~~g~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~   81 (257)
                      ||.++++|+++|||+  ++|||.++|++|+++|++|++++|+.  +.++++.+++..      ++.++.+|++|++++++
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~i~~   74 (256)
T PRK07889          1 MMGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPE------PAPVLELDVTNEEHLAS   74 (256)
T ss_pred             CcccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCC------CCcEEeCCCCCHHHHHH
Confidence            456789999999999  89999999999999999999999864  334555444421      37789999999999999


Q ss_pred             HHHHHHHHcCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh------------ccccCCC
Q 044485           82 AVNTAVTQYGKLDIMFNNAGTVDEV--KPNILDNDQAEFERILSINLVGAFLGRNMLLGVC------------GIIGGAA  147 (257)
Q Consensus        82 ~~~~~~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~------------~~~~~~~  147 (257)
                      +++++.+.++++|++|||||+....  ..++.+.++++|++.+++|+.+++.+.+.+.+..            +..+.+.
T Consensus        75 ~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~~~~  154 (256)
T PRK07889         75 LADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVAWPA  154 (256)
T ss_pred             HHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccccCCc
Confidence            9999999999999999999986421  1357788899999999999999999887775322            1122344


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccC-CCCCHHHHHHHHHHhc
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKG-AVLEPEDAAEAALYLG  225 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~a~~~~~l~  225 (257)
                      +..|++||+|+.+|+|+|+.|++++|||||+|+||+++|++.+..... ....... ...|.+ ++.+|+|+|+.++||+
T Consensus       155 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~  233 (256)
T PRK07889        155 YDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGF-ELLEEGWDERAPLGWDVKDPTPVARAVVALL  233 (256)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCc-HHHHHHHHhcCccccccCCHHHHHHHHHHHh
Confidence            567899999999999999999999999999999999999986533110 0000001 123445 5789999999999999


Q ss_pred             CCCCCcccccEEEecCceeeee
Q 044485          226 SDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       226 s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      ++.+.+++|+++.+|||..+..
T Consensus       234 s~~~~~~tG~~i~vdgg~~~~~  255 (256)
T PRK07889        234 SDWFPATTGEIVHVDGGAHAMG  255 (256)
T ss_pred             CcccccccceEEEEcCceeccC
Confidence            9999999999999999987653

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-41  Score=277.53  Aligned_cols=237  Identities=25%  Similarity=0.358  Sum_probs=198.4

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |+.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++....+ ..++..+.+|++|++++++++++
T Consensus         2 ~~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~   80 (265)
T PRK07062          2 MQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFP-GARLLAARCDVLDEADVAAFAAA   80 (265)
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCC-CceEEEEEecCCCHHHHHHHHHH
Confidence            55678999999999999999999999999999999999999888887777654322 13478899999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~  150 (257)
                      +.+.++++|+||||||....  .++.+.+.++|.+.+++|+.+++.+.+.+.               |..+..+.+....
T Consensus        81 ~~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  158 (265)
T PRK07062         81 VEARFGGVDMLVNNAGQGRV--STFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVA  158 (265)
T ss_pred             HHHhcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchH
Confidence            99999999999999998654  678889999999999999999999877663               3334455667789


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh---hcccc-------CccccccCCCCCHHHHHHH
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA---DDGLG-------GMYSNLKGAVLEPEDAAEA  220 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~---~~~~~-------~~~~~~~~~~~~~~~~a~~  220 (257)
                      |+++|+|+.+|+++++.|++++||++|+|+||+++|++........   ...+.       .....|.+++.+|+|+|+.
T Consensus       159 y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~  238 (265)
T PRK07062        159 TSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARA  238 (265)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHH
Confidence            9999999999999999999999999999999999999865432210   00010       0123466788999999999


Q ss_pred             HHHhcCCCCCcccccEEEecCceee
Q 044485          221 ALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       221 ~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ++||+++.+.+++|+.+.+|||...
T Consensus       239 ~~~L~s~~~~~~tG~~i~vdgg~~~  263 (265)
T PRK07062        239 LFFLASPLSSYTTGSHIDVSGGFAR  263 (265)
T ss_pred             HHHHhCchhcccccceEEEcCceEe
Confidence            9999999899999999999999653

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.6e-41  Score=279.07  Aligned_cols=230  Identities=21%  Similarity=0.303  Sum_probs=186.1

Q ss_pred             cccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcchhh---HhHHHHhccCCCCCCCceeEecCCCCHHHHHHH
Q 044485            8 RRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLG---ESVCKDIGSSSSSASGCSYVHCDVTKEKDIENA   82 (257)
Q Consensus         8 ~~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   82 (257)
                      +++++|++|||||+  +|||+++|++|+++|++|++++|+.+..   +++.+++.       .+.++++|++|+++++++
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~   78 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELD-------APIFLPLDVREPGQLEAV   78 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhc-------cceEEecCcCCHHHHHHH
Confidence            35789999999998  5999999999999999999999986432   23333321       156789999999999999


Q ss_pred             HHHHHHHcCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh-------------hccccCCC
Q 044485           83 VNTAVTQYGKLDIMFNNAGTVDEV--KPNILDNDQAEFERILSINLVGAFLGRNMLLGV-------------CGIIGGAA  147 (257)
Q Consensus        83 ~~~~~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~-------------~~~~~~~~  147 (257)
                      ++++.+.+|++|++|||||.....  ..++.+.+.++|++.+++|+.+++++.+.+.+.             .+..+.+.
T Consensus        79 ~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~  158 (258)
T PRK07533         79 FARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVEN  158 (258)
T ss_pred             HHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCcc
Confidence            999999999999999999975421  246778999999999999999999998777432             23334456


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcC
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      +..|+++|+|+.+|+|+|+.|++++||+||+|+||+++|++.+...... ...... ...|.+++.+|+|+++.++||++
T Consensus       159 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~p~~r~~~p~dva~~~~~L~s  237 (258)
T PRK07533        159 YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFD-ALLEDAAERAPLRRLVDIDDVGAVAAFLAS  237 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcH-HHHHHHHhcCCcCCCCCHHHHHHHHHHHhC
Confidence            6789999999999999999999999999999999999999864321100 000011 13456788999999999999999


Q ss_pred             CCCCcccccEEEecCceee
Q 044485          227 DESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~  245 (257)
                      +.+.+++|+.+.+|||..+
T Consensus       238 ~~~~~itG~~i~vdgg~~~  256 (258)
T PRK07533        238 DAARRLTGNTLYIDGGYHI  256 (258)
T ss_pred             hhhccccCcEEeeCCcccc
Confidence            9989999999999999765

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.3e-41  Score=279.56  Aligned_cols=233  Identities=21%  Similarity=0.211  Sum_probs=186.2

Q ss_pred             ccCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGAR--GIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .+++|++|||||++  |||+++|++|+++|++|++++|+. .+++..+++....+   ++..+.+|++|+++++++++++
T Consensus         3 ~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~v~~~~~~~   78 (262)
T PRK07984          3 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG---SDIVLPCDVAEDASIDAMFAEL   78 (262)
T ss_pred             ccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccC---CceEeecCCCCHHHHHHHHHHH
Confidence            37899999999986  999999999999999999999873 44444555543322   2567899999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCC---CCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhccccCCCCch
Q 044485           87 VTQYGKLDIMFNNAGTVDEVK---PNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCGIIGGAATHA  150 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~~~~~~~~~  150 (257)
                      .+.+|++|++|||||+.....   ..+.+.+.++|++.+++|+.+++.+.+.+.+             ..+..+.+.+..
T Consensus        79 ~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~  158 (262)
T PRK07984         79 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNV  158 (262)
T ss_pred             HhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcch
Confidence            999999999999999753211   1256788999999999999999998776632             223345566789


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      |++||+|+++|+|+++.|++++|||||+|+||+++|++....... ....... ...|.+++..|+|+++.++||+++.+
T Consensus       159 Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~-~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~  237 (262)
T PRK07984        159 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF-RKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLS  237 (262)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCch-HHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999999999999999875321110 0000000 13456788999999999999999999


Q ss_pred             CcccccEEEecCceeee
Q 044485          230 KCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~~  246 (257)
                      .+++|+.+.+|||..+.
T Consensus       238 ~~itG~~i~vdgg~~~~  254 (262)
T PRK07984        238 AGISGEVVHVDGGFSIA  254 (262)
T ss_pred             ccccCcEEEECCCcccc
Confidence            99999999999997654

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-41  Score=275.90  Aligned_cols=232  Identities=35%  Similarity=0.551  Sum_probs=193.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++++++++++++++.+
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEG---GEAVALAGDVRDEAYAKALVALAVE   79 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988888877775443   2478899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhcc-ccCCCCchhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGI-IGGAATHAYT  152 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~-~~~~~~~~y~  152 (257)
                      +++++|+||||||..... .++.+.+.+++++.+++|+.+++.+.+.+.               |..+. .+.+....|+
T Consensus        80 ~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~  158 (254)
T PRK07478         80 RFGGLDIAFNNAGTLGEM-GPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYA  158 (254)
T ss_pred             hcCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhH
Confidence            999999999999986432 467788999999999999999998866553               22233 3456678999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc--ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY--SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +||+|++.|+++++.|++++||++++|+||+++|++.+...... .. ....  ..+.+++.+|+|+|+.++||+++.+.
T Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  236 (254)
T PRK07478        159 ASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTP-EA-LAFVAGLHALKRMAQPEEIAQAALFLASDAAS  236 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCH-HH-HHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence            99999999999999999999999999999999999765432111 00 0111  23456788999999999999999889


Q ss_pred             cccccEEEecCceeee
Q 044485          231 CVSGHNLVVDGGFAIV  246 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~  246 (257)
                      +++|+.+.+|||..+.
T Consensus       237 ~~~G~~~~~dgg~~~~  252 (254)
T PRK07478        237 FVTGTALLVDGGVSIT  252 (254)
T ss_pred             CCCCCeEEeCCchhcc
Confidence            9999999999997653

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1e-40  Score=276.67  Aligned_cols=237  Identities=20%  Similarity=0.293  Sum_probs=193.0

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-cchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      |+.++++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++....+  .++.++++|++|+++++++++
T Consensus         2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~   79 (260)
T PRK08416          2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYG--IKAKAYPLNILEPETYKELFK   79 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHH
Confidence            567899999999999999999999999999999998875 45566666666643322  348899999999999999999


Q ss_pred             HHHHHcCCccEEEeCCCCCCC----CCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccC
Q 044485           85 TAVTQYGKLDIMFNNAGTVDE----VKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGG  145 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~  145 (257)
                      ++.+.++++|+||||||....    ...++.+.+.+++.+.+++|+.+++.+.+.+.               |..+..+.
T Consensus        80 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  159 (260)
T PRK08416         80 KIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYI  159 (260)
T ss_pred             HHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCC
Confidence            999999999999999986531    12457788899999999999999998766553               33344556


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHh
Q 044485          146 AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       146 ~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l  224 (257)
                      +....|++||+|++.|+++++.|++++||+|++|+||+++|++.+...... +....+ ...|.+++.+|+|+++.++||
T Consensus       160 ~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~-~~~~~~~~~~~~~r~~~p~~va~~~~~l  238 (260)
T PRK08416        160 ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYE-EVKAKTEELSPLNRMGQPEDLAGACLFL  238 (260)
T ss_pred             CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCH-HHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            777899999999999999999999999999999999999999865432111 111111 134567789999999999999


Q ss_pred             cCCCCCcccccEEEecCceee
Q 044485          225 GSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       225 ~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      +++.+.+++|+.+.+|||..+
T Consensus       239 ~~~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        239 CSEKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             cChhhhcccCcEEEEcCCeec
Confidence            999889999999999999765

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-40  Score=275.96  Aligned_cols=232  Identities=22%  Similarity=0.184  Sum_probs=183.6

Q ss_pred             cccCCcEEEEecC--CCchHHHHHHHHHHcCCeEEEeeCcc---hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHH
Q 044485            8 RRLQGKVALITGG--ARGIGECTARLFSKHGAKVLIADIKD---DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENA   82 (257)
Q Consensus         8 ~~~~~k~~lItGa--s~giG~~ia~~l~~~g~~Vi~~~r~~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   82 (257)
                      ..+++|++|||||  ++|||+++|++|+++|++|++++|..   +.++++.++.   +    ....+++|++|+++++++
T Consensus         2 ~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~Dv~d~~~v~~~   74 (260)
T PRK06997          2 GFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF---G----SDLVFPCDVASDEQIDAL   74 (260)
T ss_pred             CccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc---C----CcceeeccCCCHHHHHHH
Confidence            3578999999996  68999999999999999999987653   2223222222   1    134689999999999999


Q ss_pred             HHHHHHHcCCccEEEeCCCCCCCCC---CCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhccccCC
Q 044485           83 VNTAVTQYGKLDIMFNNAGTVDEVK---PNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCGIIGGA  146 (257)
Q Consensus        83 ~~~~~~~~~~id~lv~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~~~~~  146 (257)
                      ++++.+.++++|++|||||......   ..+.+.+.++|++.+++|+.+++++.+.+.+             ..+..+.+
T Consensus        75 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~  154 (260)
T PRK06997         75 FASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVP  154 (260)
T ss_pred             HHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCC
Confidence            9999999999999999999764310   1245688999999999999999999877743             33344556


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhc
Q 044485          147 ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       147 ~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~  225 (257)
                      ....|++||+|+.+|+|+|+.|++++|||||+|+||+++|++...... ..+...... ..|.+++.+|+|+++.++||+
T Consensus       155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~r~~~pedva~~~~~l~  233 (260)
T PRK06997        155 NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKD-FGKILDFVESNAPLRRNVTIEEVGNVAAFLL  233 (260)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccc-hhhHHHHHHhcCcccccCCHHHHHHHHHHHh
Confidence            677899999999999999999999999999999999999987542211 011111111 346678899999999999999


Q ss_pred             CCCCCcccccEEEecCceeeee
Q 044485          226 SDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       226 s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      ++.+.+++|+.+.+|||..+..
T Consensus       234 s~~~~~itG~~i~vdgg~~~~~  255 (260)
T PRK06997        234 SDLASGVTGEITHVDSGFNAVV  255 (260)
T ss_pred             CccccCcceeEEEEcCChhhcc
Confidence            9999999999999999987653

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-40  Score=276.54  Aligned_cols=233  Identities=26%  Similarity=0.277  Sum_probs=184.7

Q ss_pred             ccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .+.+|++|||||+  +|||+++|+.|+++|++|++++|+.... +..+++....+   .+..+++|++|+++++++++++
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~-~~~~~l~~~~~---~~~~~~~Dl~~~~~v~~~~~~~   82 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALK-KRVEPLAAELG---AFVAGHCDVTDEASIDAVFETL   82 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHH-HHHHHHHHhcC---CceEEecCCCCHHHHHHHHHHH
Confidence            3578999999997  8999999999999999999998874222 22222221111   1457899999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEV--KPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||+....  ..++.+.+.++|++.+++|+.+++.+.+.+.+             ..+..+.+.+..|
T Consensus        83 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y  162 (272)
T PRK08159         83 EKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVM  162 (272)
T ss_pred             HHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhh
Confidence            99999999999999976421  24677889999999999999999999776642             2333455667789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccC-ccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGG-MYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      ++||+|+.+|+|+|+.|++++|||||+|+||+++|++....... ...... ....|.+++..|+|+|+.++||+++.+.
T Consensus       163 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~  241 (272)
T PRK08159        163 GVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDF-RYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSR  241 (272)
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcc-hHHHHHHHhCCcccccCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999999875322110 000000 0134567889999999999999999999


Q ss_pred             cccccEEEecCceeee
Q 044485          231 CVSGHNLVVDGGFAIV  246 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~  246 (257)
                      +++|+++.+|||..+.
T Consensus       242 ~itG~~i~vdgG~~~~  257 (272)
T PRK08159        242 GVTGEVHHVDSGYHVV  257 (272)
T ss_pred             CccceEEEECCCceee
Confidence            9999999999997654

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-40  Score=273.38  Aligned_cols=238  Identities=31%  Similarity=0.452  Sum_probs=197.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.      .++.++++|++|+++++++++++.
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~~~~   75 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG------ERARFIATDITDDAAIERAVATVV   75 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CeeEEEEecCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999887777766652      237889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~~  153 (257)
                      +.++++|+||||||....  .. .+.+.++|.+.+++|+.+++.+.+.+.              |..+..+.+....|++
T Consensus        76 ~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~a  152 (261)
T PRK08265         76 ARFGRVDILVNLACTYLD--DG-LASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPA  152 (261)
T ss_pred             HHhCCCCEEEECCCCCCC--Cc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHH
Confidence            999999999999997643  22 357899999999999999999876654              3344456667789999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc--ccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY--SNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      +|++++.+++.++.|++++||++|+|+||+++|++................  ..+.+++.+|+|+|+.++||+++.+.+
T Consensus       153 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~  232 (261)
T PRK08265        153 SKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASF  232 (261)
T ss_pred             HHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccC
Confidence            999999999999999999999999999999999986543221111111111  245678899999999999999999999


Q ss_pred             ccccEEEecCceeeeecceeecc
Q 044485          232 VSGHNLVVDGGFAIVNAGFSVFG  254 (257)
Q Consensus       232 ~~G~~~~~dgG~~~~~~~~~~~~  254 (257)
                      ++|+.+.+|||..+..+....++
T Consensus       233 ~tG~~i~vdgg~~~~~~~~~~~~  255 (261)
T PRK08265        233 VTGADYAVDGGYSALGPEQGVPA  255 (261)
T ss_pred             ccCcEEEECCCeeccCCCCCCCc
Confidence            99999999999988877666554

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.9e-40  Score=275.68  Aligned_cols=234  Identities=29%  Similarity=0.541  Sum_probs=194.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+ +.+++..+++...+   .++.++.+|++++++++.+++++.
T Consensus         2 ~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~   77 (272)
T PRK08589          2 KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNG---GKAKAYHVDISDEQQVKDFASEIK   77 (272)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcC---CeEEEEEeecCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999 77777777775432   248899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh--------------hhccccCCCCchhhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG--------------VCGIIGGAATHAYTS  153 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s--------------~~~~~~~~~~~~y~~  153 (257)
                      +.++++|+||||||.... ..++.+.+.+.|++++++|+.+++.+.+.+.+              ..+..+.+....|++
T Consensus        78 ~~~g~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  156 (272)
T PRK08589         78 EQFGRVDVLFNNAGVDNA-AGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNA  156 (272)
T ss_pred             HHcCCcCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCCCchHHH
Confidence            999999999999998642 14677889999999999999999988776643              334445566789999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc----c-c-CccccccCCCCCHHHHHHHHHHhcCC
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG----L-G-GMYSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~----~-~-~~~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ||+|+++|+|+++.|++++||+||+|+||+++|++........+..    . . .....|.+++.+|+|+++.++||+++
T Consensus       157 sKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  236 (272)
T PRK08589        157 AKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASD  236 (272)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999999999875432211100    0 0 00124567788999999999999999


Q ss_pred             CCCcccccEEEecCceeee
Q 044485          228 ESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~~  246 (257)
                      ...+++|+.+.+|||....
T Consensus       237 ~~~~~~G~~i~vdgg~~~~  255 (272)
T PRK08589        237 DSSFITGETIRIDGGVMAY  255 (272)
T ss_pred             hhcCcCCCEEEECCCcccC
Confidence            9999999999999997644

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-40  Score=272.27  Aligned_cols=231  Identities=28%  Similarity=0.414  Sum_probs=190.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch-hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD-LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +++++|++||||+++|||+++|++|+++|++|++++|+.+ .+++..+++...+   .++..+.+|++|+++++++++++
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~~   80 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAG---RRAIQIAADVTSKADLRAAVART   80 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999764 4566666665432   24788999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCC--CCc
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGA--ATH  149 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~--~~~  149 (257)
                      .+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+  ...
T Consensus        81 ~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~  158 (254)
T PRK06114         81 EAELGALTLAVNAAGIANA--NPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQA  158 (254)
T ss_pred             HHHcCCCCEEEECCCCCCC--CChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcc
Confidence            9999999999999998654  567888999999999999999999866652               223333333  257


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      .|+++|+|++.++|+++.|+.++||++|+|+||+++|++..... ..+ ....+ ...|.+++.+|+|+++.++||+++.
T Consensus       159 ~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~-~~~-~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~  236 (254)
T PRK06114        159 HYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPE-MVH-QTKLFEEQTPMQRMAKVDEMVGPAVFLLSDA  236 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccccc-chH-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            89999999999999999999999999999999999999864210 000 00011 1446678999999999999999999


Q ss_pred             CCcccccEEEecCceee
Q 044485          229 SKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~  245 (257)
                      +.+++|+++.+|||..+
T Consensus       237 ~~~~tG~~i~~dgg~~~  253 (254)
T PRK06114        237 ASFCTGVDLLVDGGFVC  253 (254)
T ss_pred             ccCcCCceEEECcCEec
Confidence            99999999999999864

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=3e-40  Score=260.51  Aligned_cols=213  Identities=31%  Similarity=0.465  Sum_probs=183.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ..+++|+++|||||+|||.++|++|++.|++|++++|+.+.++++.+++.+     .+++.+..|++|+++++.+++.+.
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-----~~~~~~~~DVtD~~~~~~~i~~~~   76 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-----GAALALALDVTDRAAVEAAIEALP   76 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-----CceEEEeeccCCHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999999999999865     238999999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~  152 (257)
                      +.++++|+||||||....  .++.+.+.++|++|+++|+.|.++..+.+               +|+.+..++++...||
T Consensus        77 ~~~g~iDiLvNNAGl~~g--~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~  154 (246)
T COG4221          77 EEFGRIDILVNNAGLALG--DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYG  154 (246)
T ss_pred             HhhCcccEEEecCCCCcC--ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccch
Confidence            999999999999998765  88999999999999999999999998877               4677888999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh-hhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL-ADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      ++|+|+.+|++.|++|+..++|||..|+||.+.|..+...... ..+.....+  .......|+|+|+.++|.++.+.
T Consensus       155 ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y--~~~~~l~p~dIA~~V~~~~~~P~  230 (246)
T COG4221         155 ATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVY--KGGTALTPEDIAEAVLFAATQPQ  230 (246)
T ss_pred             hhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHh--ccCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999999999977644333221 111111111  12336799999999999998764

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-40  Score=270.78  Aligned_cols=232  Identities=26%  Similarity=0.388  Sum_probs=196.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++....   .++..+.+|++|+++++++++++.
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~   81 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEG---IKAHAAPFNVTHKQEVEAAIEHIE   81 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC---CeEEEEecCCCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999888888777775432   247789999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|++|||+|....  .++.+.+.++|++.+++|+.+++.+.+.+.               +..+..+.+....|+
T Consensus        82 ~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  159 (254)
T PRK08085         82 KDIGPIDVLINNAGIQRR--HPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYA  159 (254)
T ss_pred             HhcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchH
Confidence            999999999999997644  568889999999999999999999876653               233445566778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccC-ccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGG-MYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++|+|++.++++++.|++++||++|+|+||+++|++.+...... ..... ....|.+++.+|+|+++.+.||+++.+.+
T Consensus       160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~  238 (254)
T PRK08085        160 ASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDE-AFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDF  238 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCH-HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999999875432111 00000 11456678899999999999999999999


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      ++|+.+.+|||...
T Consensus       239 i~G~~i~~dgg~~~  252 (254)
T PRK08085        239 VNGHLLFVDGGMLV  252 (254)
T ss_pred             CcCCEEEECCCeee
Confidence            99999999999764

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-40  Score=269.85  Aligned_cols=236  Identities=35%  Similarity=0.560  Sum_probs=198.0

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |++++.+|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++...+   .++.++.+|+++.++++.++++
T Consensus         1 m~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~   77 (253)
T PRK06172          1 MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAG---GEALFVACDVTRDAEVKALVEQ   77 (253)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHH
Confidence            4456889999999999999999999999999999999999888777777765433   3488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~  150 (257)
                      +.+.++++|++|||+|..... .++.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+....
T Consensus        78 ~~~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~  156 (253)
T PRK06172         78 TIAAYGRLDYAFNNAGIEIEQ-GRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSI  156 (253)
T ss_pred             HHHHhCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCch
Confidence            999999999999999976432 457788999999999999999988765542               3445556677889


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      |+++|+|+++|+++++.|+.++||++++|+||+++|++.+......+.....+. ..+.++..+|+++++.++||+++.+
T Consensus       157 Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~  236 (253)
T PRK06172        157 YAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGA  236 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999999999997764321121111111 3455678899999999999999999


Q ss_pred             CcccccEEEecCceee
Q 044485          230 KCVSGHNLVVDGGFAI  245 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~  245 (257)
                      .+++|+.+.+|||..+
T Consensus       237 ~~~~G~~i~~dgg~~~  252 (253)
T PRK06172        237 SFTTGHALMVDGGATA  252 (253)
T ss_pred             cCcCCcEEEECCCccC
Confidence            9999999999999753

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-39  Score=269.91  Aligned_cols=229  Identities=22%  Similarity=0.248  Sum_probs=189.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +++|||||++|||++++++|+++|++|++++|+++.+++..++++...    ++.++++|++|+++++++++++.+.+++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~Dv~d~~~~~~~~~~~~~~~g~   76 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG----EVYAVKADLSDKDDLKNLVKEAWELLGG   76 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC----CceEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            379999999999999999999999999999999988888877775432    3788999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCchhhhhHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~y~~sK~  156 (257)
                      +|+||||||.......++.+.+.++|.+.+++|+.+++.+.+.+.                |..+..+.+....|+++|+
T Consensus        77 id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKa  156 (259)
T PRK08340         77 IDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRA  156 (259)
T ss_pred             CCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHH
Confidence            999999999764323467788899999999999999887654442                2333445566778999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh--------hhccc-cCcc-ccccCCCCCHHHHHHHHHHhcC
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL--------ADDGL-GGMY-SNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~--------~~~~~-~~~~-~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      |+.+|+|+++.|++++||+||+|+||+++|++.+.....        .++.+ .... ..|.+|+.+|+|+|++++||++
T Consensus       157 a~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s  236 (259)
T PRK08340        157 GLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLS  236 (259)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999987543211        01100 1111 3466789999999999999999


Q ss_pred             CCCCcccccEEEecCceee
Q 044485          227 DESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~  245 (257)
                      +.+++++|+++.+|||...
T Consensus       237 ~~~~~itG~~i~vdgg~~~  255 (259)
T PRK08340        237 ENAEYMLGSTIVFDGAMTR  255 (259)
T ss_pred             cccccccCceEeecCCcCC
Confidence            9999999999999999754

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=6.3e-41  Score=274.91  Aligned_cols=222  Identities=30%  Similarity=0.495  Sum_probs=187.8

Q ss_pred             cCC--CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc-CCccE
Q 044485           19 GGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY-GKLDI   95 (257)
Q Consensus        19 Gas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-~~id~   95 (257)
                      |++  +|||+++|++|+++|++|++++|+.+.+++..+++....+    ..++.+|++++++++++++++.+.+ |+||+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~----~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~   76 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG----AEVIQCDLSDEESVEALFDEAVERFGGRIDI   76 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT----SEEEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC----CceEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence            566  9999999999999999999999999987666655544332    3359999999999999999999999 99999


Q ss_pred             EEeCCCCCCC--CCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchhhhhHHHHHH
Q 044485           96 MFNNAGTVDE--VKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYTSSKHGLLG  160 (257)
Q Consensus        96 lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y~~sK~a~~~  160 (257)
                      ||||++....  ...++.+.+.++|.+.+++|+.+++.+.+.+.             +..+..+.+....|+++|+|+++
T Consensus        77 lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~  156 (241)
T PF13561_consen   77 LVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEG  156 (241)
T ss_dssp             EEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHH
T ss_pred             EEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHH
Confidence            9999998654  23678889999999999999999999987773             34455567778899999999999


Q ss_pred             HHHHHHHHhcc-CCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEe
Q 044485          161 LMKNTAVELGR-FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVV  239 (257)
Q Consensus       161 ~~~~l~~e~~~-~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~  239 (257)
                      |+|+++.|+++ +|||||+|+||+++|++.+................|.+++.+|+|+|++++||+|+.+.++||++|.+
T Consensus       157 l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~v  236 (241)
T PF13561_consen  157 LTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPV  236 (241)
T ss_dssp             HHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEE
T ss_pred             HHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEE
Confidence            99999999999 99999999999999998765543222111111267778889999999999999999999999999999


Q ss_pred             cCcee
Q 044485          240 DGGFA  244 (257)
Q Consensus       240 dgG~~  244 (257)
                      |||++
T Consensus       237 DGG~s  241 (241)
T PF13561_consen  237 DGGFS  241 (241)
T ss_dssp             STTGG
T ss_pred             CCCcC
Confidence            99974

...

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-39  Score=272.13  Aligned_cols=230  Identities=28%  Similarity=0.501  Sum_probs=191.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc---------hhhHhHHHHhccCCCCCCCceeEecCCCCHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD---------DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDI   79 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~---------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v   79 (257)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.         +.+++..+++...+   .++.++.+|++|++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dv~~~~~v   79 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG---GEAVANGDDIADWDGA   79 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcC---CceEEEeCCCCCHHHH
Confidence            47899999999999999999999999999999998876         56666667665432   2478899999999999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------------h
Q 044485           80 ENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------------G  138 (257)
Q Consensus        80 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------------s  138 (257)
                      +++++++.+.+|++|+||||||+...  .++.+.+.++|++.+++|+.+++.+.+.+.                     |
T Consensus        80 ~~~~~~~~~~~g~id~lv~nAG~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS  157 (286)
T PRK07791         80 ANLVDAAVETFGGLDVLVNNAGILRD--RMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSS  157 (286)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCc
Confidence            99999999999999999999998754  578899999999999999999999866553                     2


Q ss_pred             hhccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccC--CCCCHHH
Q 044485          139 VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKG--AVLEPED  216 (257)
Q Consensus       139 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  216 (257)
                      ..+..+.+....|++||+|+++|+|+++.|++++|||||+|+|| ++|++.........   .   ..+.+  +..+|+|
T Consensus       158 ~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~~~---~---~~~~~~~~~~~ped  230 (286)
T PRK07791        158 GAGLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAEMM---A---KPEEGEFDAMAPEN  230 (286)
T ss_pred             hhhCcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHHHH---h---cCcccccCCCCHHH
Confidence            23444566778999999999999999999999999999999999 78987643321100   0   01111  3578999


Q ss_pred             HHHHHHHhcCCCCCcccccEEEecCceeeeecce
Q 044485          217 AAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGF  250 (257)
Q Consensus       217 ~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~~~~  250 (257)
                      +|+.++||+++.+.+++|+.+.+|||.......|
T Consensus       231 va~~~~~L~s~~~~~itG~~i~vdgG~~~~~~~~  264 (286)
T PRK07791        231 VSPLVVWLGSAESRDVTGKVFEVEGGKISVAEGW  264 (286)
T ss_pred             HHHHHHHHhCchhcCCCCcEEEEcCCceEEechh
Confidence            9999999999999999999999999998876555

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=2.5e-39  Score=270.75  Aligned_cols=235  Identities=29%  Similarity=0.441  Sum_probs=195.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+   .++.++++|++++++++.+++++.+
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAG---GEALAVKADVLDKESLEQARQQILE   83 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999888777777765432   2478899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCC-------------CCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhh
Q 044485           89 QYGKLDIMFNNAGTVDEV-------------KPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVC  140 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~-------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~  140 (257)
                      .++++|++|||||...+.             ..++.+.+.++|++.+++|+.+++.+.+.+.               |..
T Consensus        84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~  163 (278)
T PRK08277         84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMN  163 (278)
T ss_pred             HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccch
Confidence            999999999999965321             1346788899999999999999998765552               344


Q ss_pred             ccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc----cccCc-cccccCCCCCHH
Q 044485          141 GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD----GLGGM-YSNLKGAVLEPE  215 (257)
Q Consensus       141 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~  215 (257)
                      +..+.+....|+++|+|++.|+|+++.|++++||++|.|+||+++|++.+........    ..... ...|.+++.+|+
T Consensus       164 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~  243 (278)
T PRK08277        164 AFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPE  243 (278)
T ss_pred             hcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHH
Confidence            5556677789999999999999999999999999999999999999986543221110    00111 135667899999


Q ss_pred             HHHHHHHHhcCC-CCCcccccEEEecCceeee
Q 044485          216 DAAEAALYLGSD-ESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       216 ~~a~~~~~l~s~-~~~~~~G~~~~~dgG~~~~  246 (257)
                      |+|++++||+++ .+.+++|+.+.+|||....
T Consensus       244 dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~~  275 (278)
T PRK08277        244 ELLGTLLWLADEKASSFVTGVVLPVDGGFSAY  275 (278)
T ss_pred             HHHHHHHHHcCccccCCcCCCEEEECCCeecc
Confidence            999999999999 8899999999999997643

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.8e-40  Score=274.86  Aligned_cols=250  Identities=20%  Similarity=0.257  Sum_probs=186.0

Q ss_pred             ccccccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHh---------ccCCCC---CCCceeEe
Q 044485            5 LMLRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI---------GSSSSS---ASGCSYVH   70 (257)
Q Consensus         5 ~~~~~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~---------~~~~~~---~~~v~~~~   70 (257)
                      +|+.++.||++||||++  +|||+++|+.|+++|++|++.+|.+ .+....+..         ....+.   ..++..+.
T Consensus         1 ~~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   79 (299)
T PRK06300          1 MLKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMD   79 (299)
T ss_pred             CCCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhh
Confidence            46778999999999996  9999999999999999999987542 111110000         000000   00122233


Q ss_pred             cCCCCHH------------------HHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHH
Q 044485           71 CDVTKEK------------------DIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG  132 (257)
Q Consensus        71 ~D~~~~~------------------~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l  132 (257)
                      +|+++++                  +++++++++.+++|++|+||||||.......++.+.+.++|++++++|+.+++++
T Consensus        80 ~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l  159 (299)
T PRK06300         80 ASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSL  159 (299)
T ss_pred             hhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence            4444443                  6899999999999999999999987542236788999999999999999999999


Q ss_pred             HHHHHh-------------hhccccCCCCc-hhhhhHHHHHHHHHHHHHHhcc-CCcEEEeecCCCccChhhHhHhhhhh
Q 044485          133 RNMLLG-------------VCGIIGGAATH-AYTSSKHGLLGLMKNTAVELGR-FGIRVNCVSPYAVSTPLAKDFLKLAD  197 (257)
Q Consensus       133 ~~~~~s-------------~~~~~~~~~~~-~y~~sK~a~~~~~~~l~~e~~~-~gi~v~~i~pg~v~t~~~~~~~~~~~  197 (257)
                      .+.+.+             ..+..+.+... .|++||+|+++|+|+|+.|+++ +|||||+|+||+++|++....... +
T Consensus       160 ~~a~~p~m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~-~  238 (299)
T PRK06300        160 LSHFGPIMNPGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFI-E  238 (299)
T ss_pred             HHHHHHHhhcCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccccc-H
Confidence            877743             23444455554 7999999999999999999987 599999999999999986432100 0


Q ss_pred             ccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeeecceeecccC
Q 044485          198 DGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSVFGKS  256 (257)
Q Consensus       198 ~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~~~~~~~~~~  256 (257)
                      ...... ...+.++...|+|+++.++||+++.+.+++|+.+.+|||..+.+..-+.|-++
T Consensus       239 ~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~  298 (299)
T PRK06300        239 RMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMGIGPEMFPKD  298 (299)
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcceecCCcCccccc
Confidence            000000 12345678899999999999999999999999999999999988777766543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-39  Score=268.63  Aligned_cols=232  Identities=31%  Similarity=0.487  Sum_probs=192.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||.+++++|+++|++|++++|+ +..++..+++...+   .++.++.+|+++.++++++++++.
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~   86 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEG---RKVTFVQVDLTKPESAEKVVKEAL   86 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999998 55556655554332   247899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|++|||+|....  .++.+.+.++|++.+++|+.+++.+.+.+.               +..+..+.+....|+
T Consensus        87 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  164 (258)
T PRK06935         87 EEFGKIDILVNNAGTIRR--APLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYT  164 (258)
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhH
Confidence            999999999999998654  677888999999999999999998876663               233444556678999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      ++|+|++++++++++|+.++||+||.|+||+++|++.+................+.+++..|+|+++.+.||+++.+.++
T Consensus       165 asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  244 (258)
T PRK06935        165 ASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYV  244 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCC
Confidence            99999999999999999999999999999999999765332111100001113456789999999999999999999999


Q ss_pred             cccEEEecCceee
Q 044485          233 SGHNLVVDGGFAI  245 (257)
Q Consensus       233 ~G~~~~~dgG~~~  245 (257)
                      +|+++.+|||...
T Consensus       245 ~G~~i~~dgg~~~  257 (258)
T PRK06935        245 NGHILAVDGGWLV  257 (258)
T ss_pred             CCCEEEECCCeec
Confidence            9999999999754

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=4.3e-39  Score=265.89  Aligned_cols=229  Identities=23%  Similarity=0.404  Sum_probs=187.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++||||+++|||++++++|+++|++|++++++..  ++..+++....   .++..+++|++|.++++++++++.+
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALG---RRFLSLTADLRKIDGIPALLERAVA   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            688999999999999999999999999999998877542  33344443322   2478899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhccccCCCCchhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIGGAATHAYT  152 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~~~~~~~y~  152 (257)
                      .++++|++|||||....  .++.+.+.++|++.+++|+.+++.+.+.+..                ..+..+.+....|+
T Consensus        82 ~~~~~D~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  159 (253)
T PRK08993         82 EFGHIDILVNNAGLIRR--EDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYT  159 (253)
T ss_pred             HhCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchH
Confidence            99999999999998654  5678899999999999999999988766532                23334455667999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++|+|+++++|.++.|+.++||+||.|+||+++|++......... ....+. ..|.+++..|+|+|+.+.||+++.+.+
T Consensus       160 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~-~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~  238 (253)
T PRK08993        160 ASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQ-RSAEILDRIPAGRWGLPSDLMGPVVFLASSASDY  238 (253)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchH-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            999999999999999999999999999999999998754321111 000111 345678999999999999999999999


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      ++|+.+.+|||..+
T Consensus       239 ~~G~~~~~dgg~~~  252 (253)
T PRK08993        239 INGYTIAVDGGWLA  252 (253)
T ss_pred             ccCcEEEECCCEec
Confidence            99999999999754

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-39  Score=264.40  Aligned_cols=229  Identities=28%  Similarity=0.367  Sum_probs=186.1

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEee-CcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIAD-IKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +++|++|||||++|||.+++++|+++|++|+++. |+.+..++..+++...+   .++..+.+|+++.+++..+++++.+
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG---GSAFSIGANLESLHGVEALYSSLDN   78 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcC---CceEEEecccCCHHHHHHHHHHHHH
Confidence            3579999999999999999999999999998875 56666666666665432   2377899999999999999988875


Q ss_pred             H----cC--CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCc
Q 044485           89 Q----YG--KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATH  149 (257)
Q Consensus        89 ~----~~--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~  149 (257)
                      .    ++  ++|+||||||....  .++.+.+.++|++++++|+.+++.+.+.+.             |..+..+.+...
T Consensus        79 ~~~~~~g~~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  156 (252)
T PRK12747         79 ELQNRTGSTKFDILINNAGIGPG--AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFI  156 (252)
T ss_pred             HhhhhcCCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCch
Confidence            3    34  79999999997543  568889999999999999999999876663             334445566778


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc--ccccCCCCCHHHHHHHHHHhcCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY--SNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      .|++||+|+++++|+++.|++++|||+|+|+||+++|++.+......  ......  ..+.+++.+|+|+|+.+.||+++
T Consensus       157 ~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  234 (252)
T PRK12747        157 AYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDP--MMKQYATTISAFNRLGEVEDIADTAAFLASP  234 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCH--HHHHHHHhcCcccCCCCHHHHHHHHHHHcCc
Confidence            99999999999999999999999999999999999999865432110  011111  12456788999999999999999


Q ss_pred             CCCcccccEEEecCceee
Q 044485          228 ESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~  245 (257)
                      .+.+++|+.+.+|||..+
T Consensus       235 ~~~~~~G~~i~vdgg~~~  252 (252)
T PRK12747        235 DSRWVTGQLIDVSGGSCL  252 (252)
T ss_pred             cccCcCCcEEEecCCccC
Confidence            889999999999999753

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-39  Score=264.03  Aligned_cols=233  Identities=25%  Similarity=0.370  Sum_probs=196.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||+++||++++++|+++|++|++++|+++.+++..+.++..+   .++.++++|++|+++++.+++++.
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   82 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQG---LSAHALAFDVTDHDAVRAAIDAFE   82 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC---ceEEEEEccCCCHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999999888777777775432   348889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|+||||+|....  .++.+.+.++|++.+++|+.+++.+.+.+.               +..+..+.+....|+
T Consensus        83 ~~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  160 (255)
T PRK07523         83 AEIGPIDILVNNAGMQFR--TPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYT  160 (255)
T ss_pred             HhcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHH
Confidence            999999999999998754  678889999999999999999999877663               333445567788999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++|++++.++|.++.|++++||++++|+||+++|++......... ..... ...+.+++..|+|+|+.++||+++.+.+
T Consensus       161 ~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  239 (255)
T PRK07523        161 ATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPE-FSAWLEKRTPAGRWGKVEELVGACVFLASDASSF  239 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHH-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence            999999999999999999999999999999999998654322111 00011 1345678899999999999999998899


Q ss_pred             ccccEEEecCceeee
Q 044485          232 VSGHNLVVDGGFAIV  246 (257)
Q Consensus       232 ~~G~~~~~dgG~~~~  246 (257)
                      ++|+.+.+|||..++
T Consensus       240 ~~G~~i~~~gg~~~~  254 (255)
T PRK07523        240 VNGHVLYVDGGITAS  254 (255)
T ss_pred             ccCcEEEECCCeecc
Confidence            999999999997653

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=5.3e-39  Score=260.39  Aligned_cols=211  Identities=23%  Similarity=0.313  Sum_probs=185.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+.++++||||||+|||.++|+.|+++|++|++++|++++++++.+++....  +.++.++.+|+++++++..+.+++.+
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~--~v~v~vi~~DLs~~~~~~~l~~~l~~   80 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT--GVEVEVIPADLSDPEALERLEDELKE   80 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh--CceEEEEECcCCChhHHHHHHHHHHh
Confidence            4567999999999999999999999999999999999999999999998755  35589999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~~  153 (257)
                      ..+.||+||||||+...  .++.+.++++.++++++|+.++..+++.+               .|..+..|.|....|++
T Consensus        81 ~~~~IdvLVNNAG~g~~--g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~A  158 (265)
T COG0300          81 RGGPIDVLVNNAGFGTF--GPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSA  158 (265)
T ss_pred             cCCcccEEEECCCcCCc--cchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHH
Confidence            98899999999999876  78999999999999999999999998887               36778889999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      ||+++.+|+++|+.|+.++||+|..++||++.|++.... .     .......+...+.+|+++|+.++..+....
T Consensus       159 TKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~-~-----~~~~~~~~~~~~~~~~~va~~~~~~l~~~k  228 (265)
T COG0300         159 TKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAK-G-----SDVYLLSPGELVLSPEDVAEAALKALEKGK  228 (265)
T ss_pred             HHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccc-c-----cccccccchhhccCHHHHHHHHHHHHhcCC
Confidence            999999999999999999999999999999999987511 0     001112233457899999999999887643

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=8.4e-39  Score=269.56  Aligned_cols=232  Identities=27%  Similarity=0.343  Sum_probs=188.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc--hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD--DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ++++|++|||||++|||++++++|+++|++|++++|+.  +..+++.+.+...+   .++.++.+|++|++++.++++++
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~  122 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECG---RKAVLLPGDLSDEKFARSLVHEA  122 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcC---CeEEEEEccCCCHHHHHHHHHHH
Confidence            47889999999999999999999999999999988753  34445544443322   24788999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchhhh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y~~  153 (257)
                      .+.++++|++|||||..... .++.+.+.++|++.+++|+.+++.+.+.+.             |..+..+.+....|++
T Consensus       123 ~~~~g~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~a  201 (294)
T PRK07985        123 HKALGGLDIMALVAGKQVAI-PDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAA  201 (294)
T ss_pred             HHHhCCCCEEEECCCCCcCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHH
Confidence            99999999999999975321 467888999999999999999999877663             3334445566789999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      +|+|+++|++.++.|++++||++|+|+||+++|++...... ..+....+. ..+.+++..|+|+|++++||+++.+.++
T Consensus       202 sKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~i  280 (294)
T PRK07985        202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ-TQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYV  280 (294)
T ss_pred             HHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCC-CHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCc
Confidence            99999999999999999999999999999999997532100 000000111 3456778999999999999999999999


Q ss_pred             cccEEEecCceee
Q 044485          233 SGHNLVVDGGFAI  245 (257)
Q Consensus       233 ~G~~~~~dgG~~~  245 (257)
                      +|+.+.+|||..+
T Consensus       281 tG~~i~vdgG~~~  293 (294)
T PRK07985        281 TAEVHGVCGGEHL  293 (294)
T ss_pred             cccEEeeCCCeeC
Confidence            9999999999754

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=1.5e-38  Score=263.40  Aligned_cols=222  Identities=29%  Similarity=0.489  Sum_probs=186.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+...              ++.++.+|++|+++++++++++.
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~--------------~~~~~~~D~~~~~~i~~~~~~~~   67 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN--------------DVDYFKVDVSNKEQVIKGIDYVI   67 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC--------------ceEEEEccCCCHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999864321              27889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|+
T Consensus        68 ~~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  145 (258)
T PRK06398         68 SKYGRIDILVNNAGIESY--GAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYV  145 (258)
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhh
Confidence            999999999999998644  678899999999999999999999877663               233445567788999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh----hccc----cCc-cccccCCCCCHHHHHHHHHH
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA----DDGL----GGM-YSNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~----~~~~----~~~-~~~~~~~~~~~~~~a~~~~~  223 (257)
                      ++|+|+++|+|+++.|+.++ |++|+|+||+++|++........    +...    ..+ ...+.+++..|+|+|+.++|
T Consensus       146 ~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~  224 (258)
T PRK06398        146 TSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAF  224 (258)
T ss_pred             hhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHH
Confidence            99999999999999999886 99999999999999875432110    0000    000 12456778899999999999


Q ss_pred             hcCCCCCcccccEEEecCceeee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      |+++.+.+++|+.+.+|||....
T Consensus       225 l~s~~~~~~~G~~i~~dgg~~~~  247 (258)
T PRK06398        225 LASDLASFITGECVTVDGGLRAL  247 (258)
T ss_pred             HcCcccCCCCCcEEEECCccccC
Confidence            99999999999999999998765

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1e-38  Score=265.01  Aligned_cols=231  Identities=31%  Similarity=0.421  Sum_probs=187.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.      .++.++++|++|+++++.+++++.+
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~   76 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFG------DHVLVVEGDVTSYADNQRAVDQTVD   76 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CcceEEEccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999888777766552      2378899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHH----HHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCch
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAE----FERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHA  150 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~  150 (257)
                      .++++|+||||||+.... .++.+.+.++    |++++++|+.+++.+.+.+.              |..+..+.++...
T Consensus        77 ~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  155 (263)
T PRK06200         77 AFGKLDCFVGNAGIWDYN-TSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPL  155 (263)
T ss_pred             hcCCCCEEEECCCCcccC-CCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCch
Confidence            999999999999975421 3455666665    88999999999999876663              3334445566778


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHh-h-------hhhccccCc-cccccCCCCCHHHHHHHH
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFL-K-------LADDGLGGM-YSNLKGAVLEPEDAAEAA  221 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~-~-------~~~~~~~~~-~~~~~~~~~~~~~~a~~~  221 (257)
                      |++||+|++.|++.++.|+++. ||||+|+||+++|++..... .       ..+...... ...|.+++.+|+|+++.+
T Consensus       156 Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~  234 (263)
T PRK06200        156 YTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPY  234 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhh
Confidence            9999999999999999999884 99999999999999753210 0       000001111 134667899999999999


Q ss_pred             HHhcCCC-CCcccccEEEecCceeeee
Q 044485          222 LYLGSDE-SKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       222 ~~l~s~~-~~~~~G~~~~~dgG~~~~~  247 (257)
                      +||+++. +.+++|+.+.+|||..+..
T Consensus       235 ~fl~s~~~~~~itG~~i~vdgG~~~~~  261 (263)
T PRK06200        235 VLLASRRNSRALTGVVINADGGLGIRG  261 (263)
T ss_pred             hheecccccCcccceEEEEcCceeecc
Confidence            9999998 9999999999999987654

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-38  Score=262.48  Aligned_cols=233  Identities=31%  Similarity=0.441  Sum_probs=193.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+   .++..+++|+++.++++++++++.
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   80 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAG---GKAEALACHIGEMEQIDALFAHIR   80 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999999888887777775432   237789999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|+||||||.... ..++.+.+.+++++.+++|+.+++.+.+.+.               +..+..+.+....|+
T Consensus        81 ~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  159 (252)
T PRK07035         81 ERHGRLDILVNNAAANPY-FGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYS  159 (252)
T ss_pred             HHcCCCCEEEECCCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchH
Confidence            999999999999996532 2467788999999999999999998866552               334555667788999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      +||++++.|+++++.|+.++||++++|+||+++|++..................+.+++.+|+|+|+.++||+++...++
T Consensus       160 ~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  239 (252)
T PRK07035        160 ITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYT  239 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCc
Confidence            99999999999999999999999999999999999865432211100001113355678899999999999999999999


Q ss_pred             cccEEEecCcee
Q 044485          233 SGHNLVVDGGFA  244 (257)
Q Consensus       233 ~G~~~~~dgG~~  244 (257)
                      +|+++.+|||..
T Consensus       240 ~g~~~~~dgg~~  251 (252)
T PRK07035        240 TGECLNVDGGYL  251 (252)
T ss_pred             cCCEEEeCCCcC
Confidence            999999999963

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=1e-38  Score=269.92  Aligned_cols=233  Identities=27%  Similarity=0.369  Sum_probs=190.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch--hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD--LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ..+.+|++|||||++|||++++++|+++|++|++++++.+  ..++..++++..+   .++.++.+|++|.+++++++++
T Consensus        51 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~  127 (300)
T PRK06128         51 GRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEG---RKAVALPGDLKDEAFCRQLVER  127 (300)
T ss_pred             cccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcC---CeEEEEecCCCCHHHHHHHHHH
Confidence            3578999999999999999999999999999999887643  3445555554332   3478899999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchhh
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y~  152 (257)
                      +.+.++++|+||||||..... .++.+.+.++|++.+++|+.+++.+.+.+.             |..+..+.+....|+
T Consensus       128 ~~~~~g~iD~lV~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  206 (300)
T PRK06128        128 AVKELGGLDILVNIAGKQTAV-KDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYA  206 (300)
T ss_pred             HHHHhCCCCEEEECCcccCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHH
Confidence            999999999999999975432 568889999999999999999999877764             333444556677899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      +||+|++.|++.++.|+.++||+||+|+||+++|++...... ..+....+ ...+.+++..|+|++..++||+++.+.+
T Consensus       207 asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~-~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~  285 (300)
T PRK06128        207 STKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQ-PPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSY  285 (300)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCC-CHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            999999999999999999999999999999999998532110 00001111 1346678899999999999999998899


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      ++|+.+.+|||..+
T Consensus       286 ~~G~~~~v~gg~~~  299 (300)
T PRK06128        286 VTGEVFGVTGGLLL  299 (300)
T ss_pred             ccCcEEeeCCCEeC
Confidence            99999999999865

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1.9e-38  Score=265.78  Aligned_cols=243  Identities=49%  Similarity=0.833  Sum_probs=196.7

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ..++.+|++|||||++|||++++++|+++|++|++++|+.+..++..+++..    ..++.++++|++|+++++++++++
T Consensus        13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~   88 (280)
T PLN02253         13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG----EPNVCFFHCDVTVEDDVSRAVDFT   88 (280)
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC----CCceEEEEeecCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999988777776666532    234889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||.......++.+.+.+++++.+++|+.+++++.+.+.               |..+..+.+....|
T Consensus        89 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y  168 (280)
T PLN02253         89 VDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAY  168 (280)
T ss_pred             HHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCccc
Confidence            999999999999999864322457889999999999999999998765542               33444455667789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh---cccc---Ccc--ccc-cCCCCCHHHHHHHHH
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD---DGLG---GMY--SNL-KGAVLEPEDAAEAAL  222 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~---~~~~---~~~--~~~-~~~~~~~~~~a~~~~  222 (257)
                      +++|+|++.+++.++.|++++||++++|+||+++|++.........   ....   ...  ..+ .++...|+|++++++
T Consensus       169 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~  248 (280)
T PLN02253        169 TGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVL  248 (280)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999987532211100   0000   000  111 134578999999999


Q ss_pred             HhcCCCCCcccccEEEecCceeeeecceeec
Q 044485          223 YLGSDESKCVSGHNLVVDGGFAIVNAGFSVF  253 (257)
Q Consensus       223 ~l~s~~~~~~~G~~~~~dgG~~~~~~~~~~~  253 (257)
                      ||+++.+.+++|+.+.+|||..+..+++..|
T Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~~~~~~~~~  279 (280)
T PLN02253        249 FLASDEARYISGLNLMIDGGFTCTNHSLRVF  279 (280)
T ss_pred             hhcCcccccccCcEEEECCchhhccchheec
Confidence            9999999999999999999998888877655

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=3.9e-38  Score=260.43  Aligned_cols=229  Identities=28%  Similarity=0.493  Sum_probs=192.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||++|||.+++++|+++|++|++++|+.+.+++..+++....   .++.++.+|++++++++++++++.+.++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDG---GKAIAVKADVSDRDQVFAAVRQVVDTFG   78 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999999999888888777775432   2478899999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCchhhhhH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~y~~sK  155 (257)
                      ++|++|||||....  .++.+.+.+++++.+++|+.+++.+.+.+.                |..+..+.+....|+++|
T Consensus        79 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  156 (256)
T PRK08643         79 DLNVVVNNAGVAPT--TPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTK  156 (256)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHH
Confidence            99999999997644  568888999999999999999987655542                233445556678899999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc------c--ccCcc-ccccCCCCCHHHHHHHHHHhcC
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD------G--LGGMY-SNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~------~--~~~~~-~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ++++.|++.++.|+.++||+++.|+||+++|++.........+      .  ...+. ..+.+++.+|+|+++.+.||++
T Consensus       157 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~  236 (256)
T PRK08643        157 FAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAG  236 (256)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999987654321100      0  01111 3456778899999999999999


Q ss_pred             CCCCcccccEEEecCceee
Q 044485          227 DESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~  245 (257)
                      +.+.+++|+.+.+|||..+
T Consensus       237 ~~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        237 PDSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             ccccCccCcEEEeCCCeec
Confidence            9999999999999999865

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=3.3e-38  Score=259.67  Aligned_cols=230  Identities=27%  Similarity=0.427  Sum_probs=187.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||++|||.+++++|+++|++|++++|+..  ++..+.+....   .++.++.+|+++++++.++++++.+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   76 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALG---RRFLSLTADLSDIEAIKALVDSAVE   76 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcC---CceEEEECCCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999998753  33444443322   2478999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhccccCCCCchhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIGGAATHAYT  152 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~~~~~~~y~  152 (257)
                      .++++|++|||||....  .++.+.+.++|++++++|+.+++.+.+.+..                ..+..+.+....|+
T Consensus        77 ~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  154 (248)
T TIGR01832        77 EFGHIDILVNNAGIIRR--ADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYT  154 (248)
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhH
Confidence            99999999999998754  5677889999999999999999998766532                22333455677899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      ++|+|+++++|.++.|+.++||++|+|+||+++|++.+................+.+++.+|+|+|++++||+++...++
T Consensus       155 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (248)
T TIGR01832       155 ASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYV  234 (248)
T ss_pred             HHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence            99999999999999999999999999999999999865332110100000113455788999999999999999988999


Q ss_pred             cccEEEecCceee
Q 044485          233 SGHNLVVDGGFAI  245 (257)
Q Consensus       233 ~G~~~~~dgG~~~  245 (257)
                      +|+++.+|||..+
T Consensus       235 ~G~~i~~dgg~~~  247 (248)
T TIGR01832       235 NGYTLAVDGGWLA  247 (248)
T ss_pred             CCcEEEeCCCEec
Confidence            9999999999753

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-38  Score=261.47  Aligned_cols=236  Identities=33%  Similarity=0.473  Sum_probs=192.2

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      |..++++|++|||||++|||+++|++|+++|++|++++|+. +..++..+++...+   .++.++.+|++|.++++++++
T Consensus         1 ~~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~i~~~~~   77 (261)
T PRK08936          1 MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAG---GEAIAVKGDVTVESDVVNLIQ   77 (261)
T ss_pred             CccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHH
Confidence            45678999999999999999999999999999999988854 44555666664332   347889999999999999999


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCC
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAAT  148 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~  148 (257)
                      ++.+.++++|++|||||...+  .++.+.+.++|++.+++|+.+++.+.+.+.                |..+..+.+..
T Consensus        78 ~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~  155 (261)
T PRK08936         78 TAVKEFGTLDVMINNAGIENA--VPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLF  155 (261)
T ss_pred             HHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCC
Confidence            999999999999999998654  567888999999999999999997755442                22344455677


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      ..|+++|+|+++|++.++.|+.++||++++|+||+++|++.+................+.+++.+|+|+++.+.||+++.
T Consensus       156 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  235 (261)
T PRK08936        156 VHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSE  235 (261)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            89999999999999999999999999999999999999986432211110000011345678899999999999999999


Q ss_pred             CCcccccEEEecCceeee
Q 044485          229 SKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~~  246 (257)
                      +.+++|+.+.+|||..+.
T Consensus       236 ~~~~~G~~i~~d~g~~~~  253 (261)
T PRK08936        236 ASYVTGITLFADGGMTLY  253 (261)
T ss_pred             cCCccCcEEEECCCcccC
Confidence            999999999999997754

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-38  Score=265.93  Aligned_cols=230  Identities=19%  Similarity=0.235  Sum_probs=179.7

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc----------hhhHhHHHHhccCCCCCCCceeEecCCCC
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD----------DLGESVCKDIGSSSSSASGCSYVHCDVTK   75 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~----------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~   75 (257)
                      ||.++++|+++||||++|||+++|++|+++|++|++++|+.          +.++++.+++...+   .++.++++|++|
T Consensus         2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dv~~   78 (305)
T PRK08303          2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAG---GRGIAVQVDHLV   78 (305)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcC---CceEEEEcCCCC
Confidence            45678999999999999999999999999999999999974          34455555664432   237789999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCC-CCCC--CCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh------------
Q 044485           76 EKDIENAVNTAVTQYGKLDIMFNNA-GTVD--EVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC------------  140 (257)
Q Consensus        76 ~~~v~~~~~~~~~~~~~id~lv~~a-g~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~------------  140 (257)
                      +++++++++++.+.+|++|+||||| |...  ....++.+.+.++|.+.+++|+.+++.+.+.+...+            
T Consensus        79 ~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~is  158 (305)
T PRK08303         79 PEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEIT  158 (305)
T ss_pred             HHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEEC
Confidence            9999999999999999999999999 7431  112567788899999999999999999877664221            


Q ss_pred             ---ccc---cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccc-cCCCC
Q 044485          141 ---GII---GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNL-KGAVL  212 (257)
Q Consensus       141 ---~~~---~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~-~~~~~  212 (257)
                         +..   +.+....|++||+|+.+|+|+|+.|++++|||||+|+||+++|++........+..+... ...| .++..
T Consensus       159 S~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (305)
T PRK08303        159 DGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHFAISE  238 (305)
T ss_pred             CccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccccccCC
Confidence               111   122356799999999999999999999999999999999999998643221111111111 1233 35667


Q ss_pred             CHHHHHHHHHHhcCCCC-CcccccEEE
Q 044485          213 EPEDAAEAALYLGSDES-KCVSGHNLV  238 (257)
Q Consensus       213 ~~~~~a~~~~~l~s~~~-~~~~G~~~~  238 (257)
                      +|+|+|+.++||+++.. .+++|+.+.
T Consensus       239 ~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        239 TPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             CHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence            89999999999999874 589999764

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-38  Score=259.42  Aligned_cols=232  Identities=24%  Similarity=0.311  Sum_probs=189.7

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .+++++|++||||+++|||++++++|+++|++|++++|+.+.+++..+++....+  .++.++.+|+++++++++++++ 
T Consensus         2 ~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~-   78 (259)
T PRK06125          2 DLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG--VDVAVHALDLSSPEAREQLAAE-   78 (259)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcC--CceEEEEecCCCHHHHHHHHHH-
Confidence            3467899999999999999999999999999999999998888777777654322  2478899999999999888764 


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                         ++++|++|||+|....  .++.+.+.++|++++++|+.+++.+.+.+.               +..+..+.+....|
T Consensus        79 ---~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y  153 (259)
T PRK06125         79 ---AGDIDILVNNAGAIPG--GGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICG  153 (259)
T ss_pred             ---hCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHh
Confidence               4789999999998654  678899999999999999999999877663               22233344556788


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh-------hccccCcc-ccccCCCCCHHHHHHHHHH
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA-------DDGLGGMY-SNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~a~~~~~  223 (257)
                      +++|+|+++|+++++.|+.++|||||+|+||+++|++........       .+.+..+. ..+.+++.+|+|+|+.++|
T Consensus       154 ~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (259)
T PRK06125        154 SAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAF  233 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999999765432211       11111111 3455778899999999999


Q ss_pred             hcCCCCCcccccEEEecCceeee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      |+++.+.+++|+.+.+|||....
T Consensus       234 l~~~~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        234 LASPRSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             HcCchhccccCceEEecCCeeec
Confidence            99999999999999999997754

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-37  Score=257.74  Aligned_cols=229  Identities=34%  Similarity=0.510  Sum_probs=192.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+.+|++||||+++|||++++++|+++|++|++++|+.+..++..+++..      ++.++.+|++|+++++.+++++.+
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~   76 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGP------AAIAVSLDVTRQDSIDRIVAAAVE   76 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCC------ceEEEEccCCCHHHHHHHHHHHHH
Confidence            57889999999999999999999999999999999999887777666531      378899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhccccCCCCchhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIGGAATHAYT  152 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~~~~~~~y~  152 (257)
                      .++++|++|||||....  .++.+.+.++++..+++|+.+++.+.+.+..                ..+..+.+....|+
T Consensus        77 ~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  154 (257)
T PRK07067         77 RFGGIDILFNNAALFDM--APILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYC  154 (257)
T ss_pred             HcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhh
Confidence            99999999999998754  6778889999999999999999988766532                23344566778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh--------ccccCc-cccccCCCCCHHHHHHHHHH
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD--------DGLGGM-YSNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~a~~~~~  223 (257)
                      +||++++.|+|.+++|+.++||++++|+||+++|++.........        +..... ...|.+++.+|+|+|++++|
T Consensus       155 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  234 (257)
T PRK07067        155 ATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALF  234 (257)
T ss_pred             hhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Confidence            999999999999999999999999999999999997653321100        000011 13456789999999999999


Q ss_pred             hcCCCCCcccccEEEecCceee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      |+++...+++|+++++|||..+
T Consensus       235 l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        235 LASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             HhCcccccccCcEEeecCCEeC
Confidence            9999999999999999999765

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.1e-40  Score=244.63  Aligned_cols=227  Identities=26%  Similarity=0.304  Sum_probs=198.7

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |.-++.|+.+++||+..|||+++++.|++.|+.|+.+.|+++.+..+.++....      +..+..|+++.+.+.+.+. 
T Consensus         1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~------I~Pi~~Dls~wea~~~~l~-   73 (245)
T KOG1207|consen    1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSL------IIPIVGDLSAWEALFKLLV-   73 (245)
T ss_pred             CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcc------eeeeEecccHHHHHHHhhc-
Confidence            344678999999999999999999999999999999999999998888876543      7789999998766655543 


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------------HhhhccccCCCCc
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------------LGVCGIIGGAATH  149 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------------~s~~~~~~~~~~~  149 (257)
                         ..+++|.+|||||+.-.  .+|.+.+.+++++.|.+|+++.+++.+.+                +|.++..+..+..
T Consensus        74 ---~v~pidgLVNNAgvA~~--~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHt  148 (245)
T KOG1207|consen   74 ---PVFPIDGLVNNAGVATN--HPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHT  148 (245)
T ss_pred             ---ccCchhhhhccchhhhc--chHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCce
Confidence               34689999999998765  78999999999999999999999987764                4667777888888


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      .||++|+|+++++|.|+.|+++++||||++.|..+-|.|.+..+.............|.+|+-..+++.++++||+|+++
T Consensus       149 vYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  149 VYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNS  228 (245)
T ss_pred             EEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCc
Confidence            99999999999999999999999999999999999999998776655544444447888999999999999999999999


Q ss_pred             CcccccEEEecCcee
Q 044485          230 KCVSGHNLVVDGGFA  244 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~  244 (257)
                      +..+|.++.++||++
T Consensus       229 smttGstlpveGGfs  243 (245)
T KOG1207|consen  229 SMTTGSTLPVEGGFS  243 (245)
T ss_pred             CcccCceeeecCCcc
Confidence            999999999999975

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-37  Score=257.57  Aligned_cols=229  Identities=31%  Similarity=0.505  Sum_probs=183.2

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |.+++.+|+++||||++|||+++|++|+++|++|++++++.+...   +++...     ++.++.+|++|++++++++++
T Consensus         1 m~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~-----~~~~~~~Dl~~~~~~~~~~~~   72 (255)
T PRK06463          1 YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK-----GVFTIKCDVGNRDQVKKSKEV   72 (255)
T ss_pred             CCCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC-----CCeEEEecCCCHHHHHHHHHH
Confidence            334678999999999999999999999999999998877654322   222211     277899999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh---------------hccc-cCCCCc
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV---------------CGII-GGAATH  149 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~---------------~~~~-~~~~~~  149 (257)
                      +.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+...               .+.. +.+...
T Consensus        73 ~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~  150 (255)
T PRK06463         73 VEKEFGRVDVLVNNAGIMYL--MPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTT  150 (255)
T ss_pred             HHHHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCcc
Confidence            99999999999999998643  56788899999999999999999886666322               2221 234567


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh--ccccCc-cccccCCCCCHHHHHHHHHHhcC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD--DGLGGM-YSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      .|++||+|+++|+++++.|+.++||++|.|+||+++|++.........  .....+ ...+.+++.+|+|+++.++||++
T Consensus       151 ~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  230 (255)
T PRK06463        151 FYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLAS  230 (255)
T ss_pred             HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcC
Confidence            899999999999999999999999999999999999998643211100  000001 13456778899999999999999


Q ss_pred             CCCCcccccEEEecCcee
Q 044485          227 DESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~  244 (257)
                      +.+.+++|+.+.+|||..
T Consensus       231 ~~~~~~~G~~~~~dgg~~  248 (255)
T PRK06463        231 DDARYITGQVIVADGGRI  248 (255)
T ss_pred             hhhcCCCCCEEEECCCee
Confidence            988999999999999975

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=1.3e-37  Score=257.49  Aligned_cols=238  Identities=26%  Similarity=0.394  Sum_probs=197.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-cchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      +|++|||||++|||.+++++|+++|++|+++.+ +.+..++..+++...+   .++.++.+|++++++++++++++.+.+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHG---VRAEIRQLDLSDLPEGAQALDKLIQRL   78 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            589999999999999999999999999988865 4555666666665432   348899999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhccccCCCCchhhhh
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIGGAATHAYTSS  154 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~~~~~~~y~~s  154 (257)
                      +++|+||||+|....  .++.+.+.+++.+.+++|+.+++.+.+.+..                ..+..+.++...|+++
T Consensus        79 ~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~s  156 (256)
T PRK12743         79 GRIDVLVNNAGAMTK--APFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAA  156 (256)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHH
Confidence            999999999998754  5677889999999999999999998766532                2233455667899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      |++++.++++++.++.++||+++.|+||+++|++.........  .......+.++..+|+|+++.+.||+++...+++|
T Consensus       157 K~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  234 (256)
T PRK12743        157 KHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVK--PDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTG  234 (256)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHH--HHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCC
Confidence            9999999999999999999999999999999997643211100  01111345567889999999999999998899999


Q ss_pred             cEEEecCceeeeecceeecccC
Q 044485          235 HNLVVDGGFAIVNAGFSVFGKS  256 (257)
Q Consensus       235 ~~~~~dgG~~~~~~~~~~~~~~  256 (257)
                      +.+.+|||..+..+.|.+.+++
T Consensus       235 ~~~~~dgg~~~~~~~~~~~~~~  256 (256)
T PRK12743        235 QSLIVDGGFMLANPQFNSELRD  256 (256)
T ss_pred             cEEEECCCccccCCcccccccC
Confidence            9999999999999999887654

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-37  Score=257.95  Aligned_cols=230  Identities=29%  Similarity=0.483  Sum_probs=190.4

Q ss_pred             ccCCcEEEEecCCC-chHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGAR-GIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~-giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+.+|++|||||+| |||+++++.|+++|++|++++|+.+.+++..++++...+. .++.++++|++++++++++++++.
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGL-GRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEEccCCCHHHHHHHHHHHH
Confidence            35689999999985 9999999999999999999999988888777776542221 237889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhccccCCCCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~~~~~~~y  151 (257)
                      +.++++|+||||+|....  .++.+.+.++|.+.+++|+.+++.+.+.+..                ..+..+.+....|
T Consensus        93 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y  170 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGGQ--TPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHY  170 (262)
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcch
Confidence            999999999999997654  6788899999999999999999988666532                2333445667789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +++|+|+++|++.++.|++++||+||.|+||+++|++......  ++..... ...+.+++..|+|+|+.++||+++.+.
T Consensus       171 ~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~--~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~  248 (262)
T PRK07831        171 AAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTS--AELLDELAAREAFGRAAEPWEVANVIAFLASDYSS  248 (262)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence            9999999999999999999999999999999999997643211  0000001 134567889999999999999999999


Q ss_pred             cccccEEEecCce
Q 044485          231 CVSGHNLVVDGGF  243 (257)
Q Consensus       231 ~~~G~~~~~dgG~  243 (257)
                      +++|+++.+|+++
T Consensus       249 ~itG~~i~v~~~~  261 (262)
T PRK07831        249 YLTGEVVSVSSQH  261 (262)
T ss_pred             CcCCceEEeCCCC
Confidence            9999999999975

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=1.5e-37  Score=257.14  Aligned_cols=236  Identities=30%  Similarity=0.391  Sum_probs=196.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++....+ ..++..+.+|++++++++++++++.
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFP-EREVHGLAADVSDDEDRRAILDWVE   83 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCC-CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999888887777754422 2358899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------hhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------VCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------~~~~~~~~~~~~y~  152 (257)
                      +.++++|+||||+|....  .++.+.+.+++++.+++|+.+++.+.+.+.+               ..+..+.+....|+
T Consensus        84 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~  161 (257)
T PRK09242         84 DHWDGLHILVNNAGGNIR--KAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYG  161 (257)
T ss_pred             HHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchH
Confidence            999999999999998543  5677889999999999999999998776632               23344556677899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      ++|++++.|++.++.|+.++||++++|+||+++|++..................+.+++.+|+|++.++.||+++...++
T Consensus       162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  241 (257)
T PRK09242        162 MTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYI  241 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccc
Confidence            99999999999999999999999999999999999865432211100001113455678899999999999999888889


Q ss_pred             cccEEEecCceeee
Q 044485          233 SGHNLVVDGGFAIV  246 (257)
Q Consensus       233 ~G~~~~~dgG~~~~  246 (257)
                      +|+.+.+|||...+
T Consensus       242 ~g~~i~~~gg~~~~  255 (257)
T PRK09242        242 TGQCIAVDGGFLRY  255 (257)
T ss_pred             cCCEEEECCCeEee
Confidence            99999999997654

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=8.9e-38  Score=282.87  Aligned_cols=233  Identities=30%  Similarity=0.475  Sum_probs=195.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ...+|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.      .++..+.+|++|+++++++++++.+
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~  339 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG------DEHLSVQADITDEAAVESAFAQIQA  339 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CceeEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999888877776652      2367899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchhhhhH
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y~~sK  155 (257)
                      .+|++|+||||||..... .++.+.+.++|++++++|+.+++++.+.+.             |..+..+.++...|+++|
T Consensus       340 ~~g~id~li~nAg~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  418 (520)
T PRK06484        340 RWGRLDVLVNNAGIAEVF-KPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASK  418 (520)
T ss_pred             HcCCCCEEEECCCCcCCC-CChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHH
Confidence            999999999999976432 467888999999999999999999877663             445556677788999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      +++++|+|+++.|++++||+||+|+||+++|++..............+. ..+.+++.+|+|+|+.++||+++.+.+++|
T Consensus       419 aal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G  498 (520)
T PRK06484        419 AAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNG  498 (520)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence            9999999999999999999999999999999987543211111111111 345567889999999999999998899999


Q ss_pred             cEEEecCceeeeec
Q 044485          235 HNLVVDGGFAIVNA  248 (257)
Q Consensus       235 ~~~~~dgG~~~~~~  248 (257)
                      +.+.+|||...+..
T Consensus       499 ~~i~vdgg~~~~~~  512 (520)
T PRK06484        499 ATLTVDGGWTAFGD  512 (520)
T ss_pred             cEEEECCCccCCCC
Confidence            99999999865533

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=8e-38  Score=259.56  Aligned_cols=231  Identities=29%  Similarity=0.443  Sum_probs=183.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+..      ..++..+++|++|.++++++++++.+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH------GDAVVGVEGDVRSLDDHKEAVARCVA   75 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc------CCceEEEEeccCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999987766654432      12378899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCH----HHHHHHHhhhchhhhHHHHHHHh--------------hhccccCCCCch
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQ----AEFERILSINLVGAFLGRNMLLG--------------VCGIIGGAATHA  150 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~s--------------~~~~~~~~~~~~  150 (257)
                      .++++|+||||||..... .++.+.+.    ++|++.+++|+.+++.+.+.+..              ..+..+.+....
T Consensus        76 ~~g~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  154 (262)
T TIGR03325        76 AFGKIDCLIPNAGIWDYS-TALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPL  154 (262)
T ss_pred             HhCCCCEEEECCCCCccC-CccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCch
Confidence            999999999999975321 23334333    57999999999999998776643              334445556678


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHh-hhhhc-----cccCcc--ccccCCCCCHHHHHHHHH
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFL-KLADD-----GLGGMY--SNLKGAVLEPEDAAEAAL  222 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~-~~~~~-----~~~~~~--~~~~~~~~~~~~~a~~~~  222 (257)
                      |+++|+|+++|+|+++.|++++ ||||+|+||+++|++..... ...+.     ......  ..|.+++.+|+|+|+.++
T Consensus       155 Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~  233 (262)
T TIGR03325       155 YTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYV  233 (262)
T ss_pred             hHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhhee
Confidence            9999999999999999999987 99999999999999864311 00000     001111  346788999999999999


Q ss_pred             HhcCCC-CCcccccEEEecCceeeee
Q 044485          223 YLGSDE-SKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       223 ~l~s~~-~~~~~G~~~~~dgG~~~~~  247 (257)
                      ||+++. +.+++|+++.+|||+.+..
T Consensus       234 ~l~s~~~~~~~tG~~i~vdgg~~~~~  259 (262)
T TIGR03325       234 FFATRGDTVPATGAVLNYDGGMGVRG  259 (262)
T ss_pred             eeecCCCcccccceEEEecCCeeecc
Confidence            999984 6789999999999987653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-37  Score=255.28  Aligned_cols=233  Identities=33%  Similarity=0.536  Sum_probs=189.9

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+ .++..+++...+   .++.++.+|++++++++++++++.
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~   77 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRG---HRCTAVVADVRDPASVAAAIKRAK   77 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhC---CceEEEECCCCCHHHHHHHHHHHH
Confidence            4578899999999999999999999999999999999875 333444443222   347889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhc-cccCCCCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCG-IIGGAATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~-~~~~~~~~~y  151 (257)
                      +.++++|++|||||....  .++.+.+.+++++.+++|+.+++.+.+.+.               |..+ ..+.+.+..|
T Consensus        78 ~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y  155 (263)
T PRK08226         78 EKEGRIDILVNNAGVCRL--GSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAY  155 (263)
T ss_pred             HHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchH
Confidence            999999999999998654  567888899999999999999998876653               2222 2344667789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh-----hccccCc-cccccCCCCCHHHHHHHHHHhc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA-----DDGLGGM-YSNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~  225 (257)
                      +.+|++++.+++.++.|+.++||++++|+||+++|++........     .+..... ...|.+++.+|+|+|+.+.||+
T Consensus       156 ~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~  235 (263)
T PRK08226        156 ALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLA  235 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999999876532111     0001111 1345677889999999999999


Q ss_pred             CCCCCcccccEEEecCceeee
Q 044485          226 SDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       226 s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ++.+.+++|+.+.+|||..+.
T Consensus       236 ~~~~~~~~g~~i~~dgg~~~~  256 (263)
T PRK08226        236 SDESSYLTGTQNVIDGGSTLP  256 (263)
T ss_pred             CchhcCCcCceEeECCCcccC
Confidence            999999999999999998765

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-37  Score=255.42  Aligned_cols=234  Identities=31%  Similarity=0.480  Sum_probs=196.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++||||++++||++++++|+++|++|++++|+.+.+++..++++..+   .++.++++|++|+++++++++++.
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~   82 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELG---IEAHGYVCDVTDEDGVQAMVSQIE   82 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHHH
Confidence            47789999999999999999999999999999999999888877777775432   348899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|+||||||....  .++.+.+.+++.+++++|+.+++.+.+.+.               |..+..+.+....|+
T Consensus        83 ~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (265)
T PRK07097         83 KEVGVIDILVNNAGIIKR--IPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYA  160 (265)
T ss_pred             HhCCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHH
Confidence            999999999999998754  678889999999999999999998876663               333445566778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc----cccCc--cccccCCCCCHHHHHHHHHHhcC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD----GLGGM--YSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ++|++++.|++++++|+.++||+|++|+||+++|++..........    .....  ...+.+++.+|+|+|+.+.+|++
T Consensus       161 ~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  240 (265)
T PRK07097        161 AAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLAS  240 (265)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999987654321000    00000  13345678899999999999999


Q ss_pred             CCCCcccccEEEecCceeee
Q 044485          227 DESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +...+++|+.+.+|||....
T Consensus       241 ~~~~~~~g~~~~~~gg~~~~  260 (265)
T PRK07097        241 DASNFVNGHILYVDGGILAY  260 (265)
T ss_pred             cccCCCCCCEEEECCCceec
Confidence            98889999999999996543

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.5e-37  Score=254.87  Aligned_cols=226  Identities=23%  Similarity=0.330  Sum_probs=185.5

Q ss_pred             cccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCc-----------chhhHhHHHHhccCCCCCCCceeEecCCC
Q 044485            8 RRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIK-----------DDLGESVCKDIGSSSSSASGCSYVHCDVT   74 (257)
Q Consensus         8 ~~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~-----------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~   74 (257)
                      .++++|++|||||+  +|||+++|++|+++|++|++++|+           .+.+++..+++...+   .++.++++|++
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~D~~   78 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNG---VKVSSMELDLT   78 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcC---CeEEEEEcCCC
Confidence            46889999999999  499999999999999999987643           122334444454332   35889999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hh
Q 044485           75 KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GV  139 (257)
Q Consensus        75 ~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~  139 (257)
                      ++++++++++++.+.++++|++|||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |.
T Consensus        79 ~~~~i~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~  156 (256)
T PRK12859         79 QNDAPKELLNKVTEQLGYPHILVNNAAYSTN--NDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSG  156 (256)
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEccc
Confidence            9999999999999999999999999998654  678899999999999999999999866553               33


Q ss_pred             hccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHH
Q 044485          140 CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAE  219 (257)
Q Consensus       140 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  219 (257)
                      .+..+.+.+..|+++|++++.|+++++.|++++||++++|+||+++|++......   +..  ....+.++..+|+|+|+
T Consensus       157 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~---~~~--~~~~~~~~~~~~~d~a~  231 (256)
T PRK12859        157 QFQGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIK---QGL--LPMFPFGRIGEPKDAAR  231 (256)
T ss_pred             ccCCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHH---HHH--HhcCCCCCCcCHHHHHH
Confidence            4455567778999999999999999999999999999999999999986432111   000  01234566789999999


Q ss_pred             HHHHhcCCCCCcccccEEEecCce
Q 044485          220 AALYLGSDESKCVSGHNLVVDGGF  243 (257)
Q Consensus       220 ~~~~l~s~~~~~~~G~~~~~dgG~  243 (257)
                      .+.||+++...+++|+++.+|||.
T Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        232 LIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHHHHhCccccCccCcEEEeCCCc
Confidence            999999999899999999999995

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-37  Score=255.72  Aligned_cols=223  Identities=32%  Similarity=0.429  Sum_probs=185.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.+|++|||||++|||++++++|+++|++|++++|+.+.     + .  .   ..++.++++|++++++++++++++.+
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~-~--~---~~~~~~~~~D~~~~~~~~~~~~~~~~   71 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----T-V--D---GRPAEFHAADVRDPDQVAALVDAIVE   71 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----h-h--c---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999998654     1 1  1   12378899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCchhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~y~  152 (257)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.                |..+..+.+....|+
T Consensus        72 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~  149 (252)
T PRK07856         72 RHGRLDVLVNNAGGSPY--ALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYG  149 (252)
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhH
Confidence            99999999999997644  567788999999999999999999876553                233444566778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++|++++.|++.++.|+.++ |+++.|+||+++|++......... ..... ...+.+++..|+|+++.++||+++...+
T Consensus       150 ~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~  227 (252)
T PRK07856        150 AAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAE-GIAAVAATVPLGRLATPADIAWACLFLASDLASY  227 (252)
T ss_pred             HHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHH-HHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCC
Confidence            99999999999999999988 999999999999998654321111 11111 1345677889999999999999998899


Q ss_pred             ccccEEEecCceeee
Q 044485          232 VSGHNLVVDGGFAIV  246 (257)
Q Consensus       232 ~~G~~~~~dgG~~~~  246 (257)
                      ++|+.+.+|||....
T Consensus       228 i~G~~i~vdgg~~~~  242 (252)
T PRK07856        228 VSGANLEVHGGGERP  242 (252)
T ss_pred             ccCCEEEECCCcchH
Confidence            999999999997654

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-37  Score=254.62  Aligned_cols=229  Identities=27%  Similarity=0.400  Sum_probs=187.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      ||++|||||++|||++++++|+++|++|++++|+.+.+++..+++....   .++.++++|++|+++++++++++.+.++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFP---GQVLTVQMDVRNPEDVQKMVEQIDEKFG   77 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999999999999999887777777665432   2488999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCchhhhhH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~y~~sK  155 (257)
                      ++|+||||+|....  .++.+.+.++|++.+++|+.+++.+.+.+.                |..+..+.+....|+++|
T Consensus        78 ~id~lI~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  155 (252)
T PRK07677         78 RIDALINNAAGNFI--CPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAK  155 (252)
T ss_pred             CccEEEECCCCCCC--CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHH
Confidence            99999999997543  567889999999999999999999877663                233334455667899999


Q ss_pred             HHHHHHHHHHHHHhcc-CCcEEEeecCCCccChh-hHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          156 HGLLGLMKNTAVELGR-FGIRVNCVSPYAVSTPL-AKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~-~gi~v~~i~pg~v~t~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      +|+++|+|+|+.|+.+ +||+++.|+||+++|+. ...... .+...... ...+.+++.+|+|+++.+.||+++...++
T Consensus       156 aa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (252)
T PRK07677        156 AGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWE-SEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYI  234 (252)
T ss_pred             HHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccC-CHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCcccccc
Confidence            9999999999999975 79999999999999643 221111 11111111 13345678999999999999999988899


Q ss_pred             cccEEEecCceeee
Q 044485          233 SGHNLVVDGGFAIV  246 (257)
Q Consensus       233 ~G~~~~~dgG~~~~  246 (257)
                      +|+.+.+|||..+.
T Consensus       235 ~g~~~~~~gg~~~~  248 (252)
T PRK07677        235 NGTCITMDGGQWLN  248 (252)
T ss_pred             CCCEEEECCCeecC
Confidence            99999999997764

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-37  Score=255.27  Aligned_cols=232  Identities=29%  Similarity=0.433  Sum_probs=194.9

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ++++++|+++||||+++||++++++|+++|++|++++|+.+.+++..++++..+   .++.++.+|+++++++.++++++
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~   82 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAG---GAAEALAFDIADEEAVAAAFARI   82 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHHH
Confidence            446889999999999999999999999999999999999888777777765432   24789999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      .+.++++|++|||+|....  .++.+.+.++|++.+++|+.+++.+.+.+.               +..+..+.+....|
T Consensus        83 ~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y  160 (256)
T PRK06124         83 DAEHGRLDILVNNVGARDR--RPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVY  160 (256)
T ss_pred             HHhcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHh
Confidence            9999999999999998654  678888999999999999999999876663               33444556777899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +++|++++.+++.++.|+.++||+++.|+||+++|++.+....... ....+ ...+.+++.+|+|+++.+++|+++.+.
T Consensus       161 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  239 (256)
T PRK06124        161 PAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPA-VGPWLAQRTPLGRWGRPEEIAGAAVFLASPAAS  239 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChH-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccC
Confidence            9999999999999999999999999999999999997543321111 00001 123456788999999999999999999


Q ss_pred             cccccEEEecCcee
Q 044485          231 CVSGHNLVVDGGFA  244 (257)
Q Consensus       231 ~~~G~~~~~dgG~~  244 (257)
                      +++|+.+.+|||..
T Consensus       240 ~~~G~~i~~dgg~~  253 (256)
T PRK06124        240 YVNGHVLAVDGGYS  253 (256)
T ss_pred             CcCCCEEEECCCcc
Confidence            99999999999965

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-37  Score=254.07  Aligned_cols=228  Identities=35%  Similarity=0.570  Sum_probs=189.5

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++.+|++|||||+++||.+++++|+++|++|++++|+.+. .+..+++..     .++.++.+|++++++++.+++++.
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~   84 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLLG-----GNAKGLVCDVSDSQSVEAAVAAVI   84 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhhC-----CceEEEEecCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999998764 333333321     236789999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|++|||+|....  .++.+.+.+++++.+++|+.+++++.+.+.               |..+..+.+....|+
T Consensus        85 ~~~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  162 (255)
T PRK06841         85 SAFGRIDILVNSAGVALL--APAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYC  162 (255)
T ss_pred             HHhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHH
Confidence            999999999999998654  567788999999999999999999876653               334455677788999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh-ccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD-DGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++|+|++.++++++.|++++||+++.|+||+++|++.+....... ..+.  ...+.+++.+|+|+++.+++|+++...+
T Consensus       163 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~va~~~~~l~~~~~~~  240 (255)
T PRK06841        163 ASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAK--KLIPAGRFAYPEEIAAAALFLASDAAAM  240 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHH--hcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            999999999999999999999999999999999998653321100 0010  1345677899999999999999999999


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      ++|+.+.+|||..+
T Consensus       241 ~~G~~i~~dgg~~~  254 (255)
T PRK06841        241 ITGENLVIDGGYTI  254 (255)
T ss_pred             ccCCEEEECCCccC
Confidence            99999999999764

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-37  Score=256.61  Aligned_cols=220  Identities=29%  Similarity=0.384  Sum_probs=177.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|+++|||+ +|||+++|++|+ +|++|++++|+.+.+++..++++..+   .++.++++|++|+++++++++++ +.++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~i~~~~~~~-~~~g   75 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAG---FDVSTQEVDVSSRESVKALAATA-QTLG   75 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEeecCCHHHHHHHHHHH-HhcC
Confidence            589999998 699999999996 89999999999887777777665432   34788999999999999999988 5678


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhccccC-------------
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCGIIGG-------------  145 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~~~~-------------  145 (257)
                      ++|+||||||...         ..++|++.+++|+.+++++.+.+..             ..+..+.             
T Consensus        76 ~id~li~nAG~~~---------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~  146 (275)
T PRK06940         76 PVTGLVHTAGVSP---------SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATT  146 (275)
T ss_pred             CCCEEEECCCcCC---------chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccc
Confidence            9999999999742         1367899999999999998776632             2222221             


Q ss_pred             -----------------CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh-hccccCc-ccc
Q 044485          146 -----------------AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA-DDGLGGM-YSN  206 (257)
Q Consensus       146 -----------------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~~~-~~~  206 (257)
                                       +....|++||+|+..++|.++.|++++|||||+|+||+++|++........ .+..... ...
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  226 (275)
T PRK06940        147 PTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKS  226 (275)
T ss_pred             ccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhC
Confidence                             235689999999999999999999999999999999999999865422111 0111111 134


Q ss_pred             ccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          207 LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       207 ~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      |.+++.+|+|+|+.++||+++.+.+++|+.+.+|||....
T Consensus       227 p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~~  266 (275)
T PRK06940        227 PAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATAS  266 (275)
T ss_pred             CcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEEE
Confidence            6678999999999999999999999999999999997654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=8.5e-37  Score=252.39  Aligned_cols=230  Identities=31%  Similarity=0.438  Sum_probs=191.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++.+|++|||||++|||.+++++|+++|++|++++|+.+..+...+++...+   .++.++.+|+++.+++.++++.+.
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~~~   83 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG---GQAFACRCDITSEQELSALADFAL   83 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999888777777665432   247889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|++|||||....  .++ +.+.+++++.+++|+.+++.+.+.+.               |..+..+.+....|+
T Consensus        84 ~~~~~~d~li~~ag~~~~--~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  160 (255)
T PRK06113         84 SKLGKVDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA  160 (255)
T ss_pred             HHcCCCCEEEECCCCCCC--CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhH
Confidence            999999999999997653  334 67899999999999999999877663               334445566778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccC-ccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGG-MYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++|+|+++|++++++++.++||++|.|+||+++|++.+.....  ..... ....+.+++..|+|++++++||+++...+
T Consensus       161 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~  238 (255)
T PRK06113        161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP--EIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASW  238 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            9999999999999999999999999999999999986543111  00000 11344567889999999999999998999


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      ++|+.+++|||...
T Consensus       239 ~~G~~i~~~gg~~~  252 (255)
T PRK06113        239 VSGQILTVSGGGVQ  252 (255)
T ss_pred             ccCCEEEECCCccc
Confidence            99999999999543

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-36  Score=251.95  Aligned_cols=226  Identities=27%  Similarity=0.362  Sum_probs=184.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||.+++++|+++|++|++++|+++..      .      ..++.++++|++|+++++++++++.
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~------~~~~~~~~~D~~~~~~~~~~~~~~~   72 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------L------PEGVEFVAADLTTAEGCAAVARAVL   72 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------c------CCceeEEecCCCCHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999986431      1      1237889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCC-CCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGA-ATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~-~~~~y  151 (257)
                      +.++++|+||||||.......++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+ ....|
T Consensus        73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y  152 (260)
T PRK06523         73 ERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAY  152 (260)
T ss_pred             HHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchh
Confidence            99999999999999754333567788999999999999999998866553               223333333 57789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh--------ccccC----ccccccCCCCCHHHHHH
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD--------DGLGG----MYSNLKGAVLEPEDAAE  219 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--------~~~~~----~~~~~~~~~~~~~~~a~  219 (257)
                      +++|++++.|+++++.|++++||++++|+||+++|++.........        +....    ....|.+++.+|+|+++
T Consensus       153 ~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~  232 (260)
T PRK06523        153 AAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAE  232 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHH
Confidence            9999999999999999999999999999999999998654322110        00000    01245677889999999


Q ss_pred             HHHHhcCCCCCcccccEEEecCceee
Q 044485          220 AALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       220 ~~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      .++||+++.+.+++|+.+.+|||..+
T Consensus       233 ~~~~l~s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        233 LIAFLASDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             HHHHHhCcccccccCceEEecCCccC
Confidence            99999999999999999999999764

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.1e-37  Score=251.85  Aligned_cols=184  Identities=28%  Similarity=0.418  Sum_probs=166.1

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +.++.||+|||||||+|||.++|..|+++|+.++++.|....+++..+++.+..... +++++++|++|.++++++++++
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999999988887766555 6999999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y  151 (257)
                      .+.||++|+||||||....  ....+.+.+++.+.|++|+.|++++++.+               +|+.|..+.|....|
T Consensus        86 ~~~fg~vDvLVNNAG~~~~--~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y  163 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISLV--GFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIY  163 (282)
T ss_pred             HHhcCCCCEEEecCccccc--cccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCccccc
Confidence            9999999999999999873  77888899999999999999999998877               466788888888899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCC--cEEEeecCCCccChhhHhHhh
Q 044485          152 TSSKHGLLGLMKNTAVELGRFG--IRVNCVSPYAVSTPLAKDFLK  194 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~g--i~v~~i~pg~v~t~~~~~~~~  194 (257)
                      ++||.|+.+|..+|++|+.+.+  |++ +|+||+|+|++......
T Consensus       164 ~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~  207 (282)
T KOG1205|consen  164 SASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELL  207 (282)
T ss_pred             chHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhhc
Confidence            9999999999999999999977  566 99999999997655433

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=251.25  Aligned_cols=233  Identities=24%  Similarity=0.343  Sum_probs=184.8

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |..++.+|++|||||++|||++++++|+++|++|++++|+.. .++..+++...+   .++.++.+|+++.+++++++++
T Consensus         2 ~~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~   77 (260)
T PRK12823          2 MNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAG---GEALALTADLETYAGAQAAMAA   77 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcC---CeEEEEEEeCCCHHHHHHHHHH
Confidence            445688999999999999999999999999999999999853 445555554322   2478899999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhhcc------------c-cCCCCchhh
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGI------------I-GGAATHAYT  152 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~~~------------~-~~~~~~~y~  152 (257)
                      +.+.++++|+||||||.... ..++.+.+.+++++.+++|+.+++.+.+.+......            . .......|+
T Consensus        78 ~~~~~~~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~Y~  156 (260)
T PRK12823         78 AVEAFGRIDVLINNVGGTIW-AKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGINRVPYS  156 (260)
T ss_pred             HHHHcCCCeEEEECCccccC-CCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCCCCccH
Confidence            99999999999999996432 257888999999999999999999887666432210            0 112346899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh---hh-------ccccCc-cccccCCCCCHHHHHHHH
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL---AD-------DGLGGM-YSNLKGAVLEPEDAAEAA  221 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~---~~-------~~~~~~-~~~~~~~~~~~~~~a~~~  221 (257)
                      +||+|++.|++.++.|++++||++++|+||+++|++.......   .+       +..... ...+.+++..|+|+++++
T Consensus       157 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  236 (260)
T PRK12823        157 AAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAI  236 (260)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHH
Confidence            9999999999999999999999999999999999863221100   00       000001 134567788999999999


Q ss_pred             HHhcCCCCCcccccEEEecCce
Q 044485          222 LYLGSDESKCVSGHNLVVDGGF  243 (257)
Q Consensus       222 ~~l~s~~~~~~~G~~~~~dgG~  243 (257)
                      +||+++...+++|+.+++|||.
T Consensus       237 ~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        237 LFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             HHHcCcccccccCcEEeecCCC
Confidence            9999998889999999999986

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-36  Score=251.63  Aligned_cols=236  Identities=22%  Similarity=0.301  Sum_probs=191.7

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ||+++.+|++|||||++|||.+++++|+++|++|++++|+.+.+++..+++....   .++.++.+|+++++++++++++
T Consensus         3 ~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~i~~~~~~   79 (264)
T PRK07576          3 TMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAG---PEGLGVSADVRDYAAVEAAFAQ   79 (264)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC---CceEEEECCCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999887776666654332   2368899999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchh
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAY  151 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y  151 (257)
                      +.+.++++|++|||||....  .++.+.+.+++.+.+++|+.+++.+.+.+.              +..+..+.+....|
T Consensus        80 ~~~~~~~iD~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y  157 (264)
T PRK07576         80 IADEFGPIDVLVSGAAGNFP--APAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHV  157 (264)
T ss_pred             HHHHcCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHH
Confidence            99999999999999987543  567888999999999999999999876653              22334556677899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCcc-ChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVS-TPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~-t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      +++|++++.|+++++.|+.++||+++.|+||+++ |+..+..... ....... ...+.++...|+|+|+.+++|+++..
T Consensus       158 ~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  236 (264)
T PRK07576        158 CAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPS-PELQAAVAQSVPLKRNGTKQDIANAALFLASDMA  236 (264)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccC-HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhh
Confidence            9999999999999999999999999999999996 6544332110 0000000 12345678899999999999999888


Q ss_pred             CcccccEEEecCceeeee
Q 044485          230 KCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~~~  247 (257)
                      .+++|+.+.+|||..+.+
T Consensus       237 ~~~~G~~~~~~gg~~~~~  254 (264)
T PRK07576        237 SYITGVVLPVDGGWSLGG  254 (264)
T ss_pred             cCccCCEEEECCCcccCc
Confidence            899999999999986543

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-36  Score=251.02  Aligned_cols=235  Identities=28%  Similarity=0.432  Sum_probs=189.7

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |.+++.+|++|||||++|||++++++|+++|++|++++|+.+.. +..+++....   .++.++.+|+++++++++++++
T Consensus         1 ~~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~   76 (258)
T PRK08628          1 MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQ---PRAEFVQVDLTDDAQCRDAVEQ   76 (258)
T ss_pred             CCCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcC---CceEEEEccCCCHHHHHHHHHH
Confidence            34578999999999999999999999999999999999988766 5555554332   3488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchh
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAY  151 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y  151 (257)
                      +.+.++++|++|||||....  ..+.... ++|++.+++|+.+++.+.+.+.              +..+..+.+....|
T Consensus        77 ~~~~~~~id~vi~~ag~~~~--~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y  153 (258)
T PRK08628         77 TVAKFGRIDGLVNNAGVNDG--VGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGY  153 (258)
T ss_pred             HHHhcCCCCEEEECCcccCC--CcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchh
Confidence            99999999999999997543  3344444 9999999999999998866552              33445556678899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh---ccccCcc-cccc-CCCCCHHHHHHHHHHhcC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD---DGLGGMY-SNLK-GAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~---~~~~~~~-~~~~-~~~~~~~~~a~~~~~l~s  226 (257)
                      ++||++++.+++.++.|+.++||+++.|+||.++|++.+.......   ....... ..+. .++.+|+|+|+.++++++
T Consensus       154 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  233 (258)
T PRK08628        154 AAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLS  233 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999998654322111   0001111 1222 367899999999999999


Q ss_pred             CCCCcccccEEEecCceeeee
Q 044485          227 DESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      +.+.+++|+.+.+|||.....
T Consensus       234 ~~~~~~~g~~~~~~gg~~~~~  254 (258)
T PRK08628        234 ERSSHTTGQWLFVDGGYVHLD  254 (258)
T ss_pred             hhhccccCceEEecCCccccc
Confidence            988899999999999987654

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-36  Score=247.92  Aligned_cols=228  Identities=36%  Similarity=0.480  Sum_probs=189.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.+|+++||||+++||++++++|+++|++|++++|+.+.+++..+++.      .++.++++|++|.+++..+++++.+
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~   76 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELG------ESALVIRADAGDVAAQKALAQALAE   76 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC------CceEEEEecCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999877766665552      2378899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhccccCCCCchhhhhH
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCGIIGGAATHAYTSSK  155 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~~~~~~~~~y~~sK  155 (257)
                      .++++|++|||||....  .++.+.+.+++++.+++|+.+++.+.+.+.+             ..+..+.+....|+.+|
T Consensus        77 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK  154 (249)
T PRK06500         77 AFGRLDAVFINAGVAKF--APLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASK  154 (249)
T ss_pred             HhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHH
Confidence            99999999999997654  5677889999999999999999998776642             33445667788999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh---hccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA---DDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++++.|++.++.|+.++||++++|+||+++|++.+......   ........ ..+..++.+|+|+++.+++|+++...+
T Consensus       155 ~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  234 (249)
T PRK06500        155 AALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAF  234 (249)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            99999999999999999999999999999999765321000   00000001 234556789999999999999988889


Q ss_pred             ccccEEEecCcee
Q 044485          232 VSGHNLVVDGGFA  244 (257)
Q Consensus       232 ~~G~~~~~dgG~~  244 (257)
                      ++|+.+.+|||.+
T Consensus       235 ~~g~~i~~~gg~~  247 (249)
T PRK06500        235 IVGSEIIVDGGMS  247 (249)
T ss_pred             ccCCeEEECCCcc
Confidence            9999999999954

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=7.5e-36  Score=246.75  Aligned_cols=230  Identities=31%  Similarity=0.427  Sum_probs=188.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ..+++|+++||||+++||+++|++|+++|++|++++|+.+..++..+++.      .++.++++|++++++++++++++.
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~~~~   79 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG------ENAWFIAMDVADEAQVAAGVAEVL   79 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcC------CceEEEEccCCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999998776666555442      237889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~~  153 (257)
                      +.++++|++|||||...+...++.+.+.++|+..+++|+.+++.+.+.+.              |..+..+.+....|++
T Consensus        80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~  159 (255)
T PRK05717         80 GQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAA  159 (255)
T ss_pred             HHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHH
Confidence            99999999999999875433567888999999999999999999977663              3344455667789999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      +|+|++.+++.+++++.+ +|++++|+||+++|++....... ..........+.++..+|+|+++.+.+++++...+++
T Consensus       160 sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  237 (255)
T PRK05717        160 SKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRAE-PLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVT  237 (255)
T ss_pred             HHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccch-HHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence            999999999999999987 59999999999999874321100 0000000134456788999999999999998888999


Q ss_pred             ccEEEecCceee
Q 044485          234 GHNLVVDGGFAI  245 (257)
Q Consensus       234 G~~~~~dgG~~~  245 (257)
                      |+.+.+|||...
T Consensus       238 g~~~~~~gg~~~  249 (255)
T PRK05717        238 GQEFVVDGGMTR  249 (255)
T ss_pred             CcEEEECCCceE
Confidence            999999999753

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.3e-36  Score=252.41  Aligned_cols=231  Identities=27%  Similarity=0.426  Sum_probs=187.8

Q ss_pred             ccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            5 LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         5 ~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      .|..++++|++|||||++|||+++|++|+++|++|++++++. +..++..+++...+   .++.++.+|++|++++++++
T Consensus         5 ~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g---~~~~~~~~Dv~d~~~~~~~~   81 (306)
T PRK07792          5 TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAG---AKAVAVAGDISQRATADELV   81 (306)
T ss_pred             cCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcC---CeEEEEeCCCCCHHHHHHHH
Confidence            466789999999999999999999999999999999998754 45566667665432   34889999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------------hhhc
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------------GVCG  141 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------------s~~~  141 (257)
                      +++.+ +|++|+||||||....  ..+.+.+.++|++.+++|+.+++.+.+.+.                      |..+
T Consensus        82 ~~~~~-~g~iD~li~nAG~~~~--~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  158 (306)
T PRK07792         82 ATAVG-LGGLDIVVNNAGITRD--RMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAG  158 (306)
T ss_pred             HHHHH-hCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccc
Confidence            99998 9999999999998765  567889999999999999999999866542                      2223


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHH
Q 044485          142 IIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAA  221 (257)
Q Consensus       142 ~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  221 (257)
                      ..+.+....|+++|+|++.|++.++.|+.++||+||+|+|| +.|++............     .......+|+++++.+
T Consensus       159 ~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~~~~~~~~~-----~~~~~~~~pe~va~~v  232 (306)
T PRK07792        159 LVGPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADVFGDAPDVE-----AGGIDPLSPEHVVPLV  232 (306)
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhhccccchhh-----hhccCCCCHHHHHHHH
Confidence            34455667899999999999999999999999999999999 48887644322111000     0011245899999999


Q ss_pred             HHhcCCCCCcccccEEEecCceeeee
Q 044485          222 LYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       222 ~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      .||+++...+++|+.+.+|||.....
T Consensus       233 ~~L~s~~~~~~tG~~~~v~gg~~~~~  258 (306)
T PRK07792        233 QFLASPAAAEVNGQVFIVYGPMVTLV  258 (306)
T ss_pred             HHHcCccccCCCCCEEEEcCCeEEEE
Confidence            99999988899999999999987654

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-36  Score=247.26  Aligned_cols=233  Identities=25%  Similarity=0.349  Sum_probs=192.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....   .++.++.+|++|+++++.+++++.+
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLG---RRALAVPTDITDEDQCANLVALALE   78 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhC---CceEEEecCCCCHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999888777777765332   3478999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYTSS  154 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~~s  154 (257)
                      .++++|++|||||...+. .++.+.+.+++++.+++|+.+++.+.+.+.              |..+..+.+....|+++
T Consensus        79 ~~g~~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~s  157 (258)
T PRK07890         79 RFGRVDALVNNAFRVPSM-KPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMA  157 (258)
T ss_pred             HcCCccEEEECCccCCCC-CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHH
Confidence            999999999999975432 567788999999999999999999876663              23344456677899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh--------hccccCcc-ccccCCCCCHHHHHHHHHHhc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA--------DDGLGGMY-SNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~  225 (257)
                      |++++.+++.++.|++++||++++|+||++.|++........        +....... ..+.+++..|+|+++++++++
T Consensus       158 K~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~  237 (258)
T PRK07890        158 KGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLA  237 (258)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999865432110        00011111 234566789999999999999


Q ss_pred             CCCCCcccccEEEecCceee
Q 044485          226 SDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       226 s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ++...+++|+.+.+|||..+
T Consensus       238 ~~~~~~~~G~~i~~~gg~~~  257 (258)
T PRK07890        238 SDLARAITGQTLDVNCGEYH  257 (258)
T ss_pred             CHhhhCccCcEEEeCCcccc
Confidence            98878999999999999754

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-36  Score=250.79  Aligned_cols=224  Identities=27%  Similarity=0.428  Sum_probs=181.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.+|++||||+++|||++++++|+++|++|++++|+....+.            .++.++.+|++|+++++++++++.+
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~   73 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH------------ENYQFVPTDVSSAEEVNHTVAEIIE   73 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc------------CceEEEEccCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999988754321            1377899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCC-------CCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCC
Q 044485           89 QYGKLDIMFNNAGTVDEV-------KPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGA  146 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~  146 (257)
                      .++++|++|||||.....       ..++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+
T Consensus        74 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  153 (266)
T PRK06171         74 KFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSE  153 (266)
T ss_pred             HcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC
Confidence            999999999999975431       0124568899999999999999999876653               333444556


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCcc-ChhhHhHhhh---------hhccccCcc---ccccCCCCC
Q 044485          147 ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVS-TPLAKDFLKL---------ADDGLGGMY---SNLKGAVLE  213 (257)
Q Consensus       147 ~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~-t~~~~~~~~~---------~~~~~~~~~---~~~~~~~~~  213 (257)
                      ....|+++|+|+++|+|.++.|++++||++|.|+||+++ |++.......         ..+....+.   ..|.+++..
T Consensus       154 ~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  233 (266)
T PRK06171        154 GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGK  233 (266)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCC
Confidence            678999999999999999999999999999999999997 5543211100         000011111   346688999


Q ss_pred             HHHHHHHHHHhcCCCCCcccccEEEecCcee
Q 044485          214 PEDAAEAALYLGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       214 ~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~  244 (257)
                      |+|+|+++.||+++.+.+++|+.+.+|||..
T Consensus       234 ~~eva~~~~fl~s~~~~~itG~~i~vdgg~~  264 (266)
T PRK06171        234 LSEVADLVCYLLSDRASYITGVTTNIAGGKT  264 (266)
T ss_pred             HHHhhhheeeeeccccccceeeEEEecCccc
Confidence            9999999999999999999999999999964

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-36  Score=247.22  Aligned_cols=231  Identities=23%  Similarity=0.380  Sum_probs=188.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||+++||.+++++|+++|++|++++|+.+.+++..+++....+ ..++.++.+|+++++++.++++++.+.++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYG-EGMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC-CceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999999998877777666543321 12488999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhccccCCCCchhhhhH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIGGAATHAYTSSK  155 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~~~~~~~y~~sK  155 (257)
                      ++|++|||||....  .++.+.+.++|++.+++|+.+++.+.+.+..                ..+..+.+....|++||
T Consensus        81 ~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK  158 (259)
T PRK12384         81 RVDLLVYNAGIAKA--AFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAK  158 (259)
T ss_pred             CCCEEEECCCcCCC--CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHH
Confidence            99999999998755  6788899999999999999999987665532                12333445567899999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCc-cChhhHhHhhhh--------hccccCcc-ccccCCCCCHHHHHHHHHHhc
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAV-STPLAKDFLKLA--------DDGLGGMY-SNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v-~t~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~  225 (257)
                      +|+++++++++.|++++||++++|+||.+ .+++........        ++...... ..+.+++..|+|+++.+++|+
T Consensus       159 aa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~  238 (259)
T PRK12384        159 FGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYA  238 (259)
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHc
Confidence            99999999999999999999999999974 677654332210        11111111 346678899999999999999


Q ss_pred             CCCCCcccccEEEecCceee
Q 044485          226 SDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       226 s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ++.+.+++|+++.+|||..+
T Consensus       239 ~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        239 SPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             CcccccccCceEEEcCCEEe
Confidence            98888899999999999875

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-36  Score=246.89  Aligned_cols=229  Identities=30%  Similarity=0.446  Sum_probs=190.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.+|+++||||+++||+++++.|+++|++|++++|+.+.++++.+++....   .++.++.+|++++++++++++++.+
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   82 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEG---GAAHVVSLDVTDYQSIKAAVAHAET   82 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHH
Confidence            5788999999999999999999999999999999999988887777664432   2378999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-----------------------hhccccC
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-----------------------VCGIIGG  145 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-----------------------~~~~~~~  145 (257)
                      .++++|++|||+|....  .++.+.+.++++.++++|+.+++.+.+.+..                       ..+..+.
T Consensus        83 ~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  160 (258)
T PRK06949         83 EAGTIDILVNNSGVSTT--QKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL  160 (258)
T ss_pred             hcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC
Confidence            99999999999998654  5677888999999999999999988766532                       1122334


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhc
Q 044485          146 AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       146 ~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  225 (257)
                      +....|+++|++++.+++.++.++.++||++++|+||+++|++....... ..........+.+++..|+|+++.+.||+
T Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~l~  239 (258)
T PRK06949        161 PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET-EQGQKLVSMLPRKRVGKPEDLDGLLLLLA  239 (258)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh-HHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            55678999999999999999999999999999999999999986543211 10000011234567899999999999999


Q ss_pred             CCCCCcccccEEEecCce
Q 044485          226 SDESKCVSGHNLVVDGGF  243 (257)
Q Consensus       226 s~~~~~~~G~~~~~dgG~  243 (257)
                      ++.+.+++|+.+.+|||.
T Consensus       240 ~~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        240 ADESQFINGAIISADDGF  257 (258)
T ss_pred             ChhhcCCCCcEEEeCCCC
Confidence            999999999999999996

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.6e-36  Score=245.81  Aligned_cols=228  Identities=30%  Similarity=0.441  Sum_probs=181.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-cchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+.+|++|||||++|||++++++|+++|++|+++.+ +.+..++...++.      .++.++.+|++|+++++++++++.
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~   75 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELG------DRAIALQADVTDREQVQAMFATAT   75 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC------CceEEEEcCCCCHHHHHHHHHHHH
Confidence            356799999999999999999999999999988765 4444444444432      247889999999999999999999


Q ss_pred             HHcCC-ccEEEeCCCCCCC----CCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------hhccccCCC
Q 044485           88 TQYGK-LDIMFNNAGTVDE----VKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------VCGIIGGAA  147 (257)
Q Consensus        88 ~~~~~-id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------~~~~~~~~~  147 (257)
                      +.++. +|++|||||....    ...++.+.+.+++++.+++|+.+++.+.+.+..               ..+..+..+
T Consensus        76 ~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  155 (253)
T PRK08642         76 EHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVP  155 (253)
T ss_pred             HHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC
Confidence            98887 9999999986421    113577889999999999999999998776632               112223345


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcC
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ...|+++|+|+++|+|.+++++.++||++|+|+||+++|+.......  +.....+ ...|.+++.+|+|+++.+.||++
T Consensus       156 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  233 (253)
T PRK08642        156 YHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATP--DEVFDLIAATTPLRKVTTPQEFADAVLFFAS  233 (253)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCC--HHHHHHHHhcCCcCCCCCHHHHHHHHHHHcC
Confidence            67899999999999999999999999999999999999985432111  1111111 13455778999999999999999


Q ss_pred             CCCCcccccEEEecCcee
Q 044485          227 DESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~  244 (257)
                      +...+++|+.+.+|||..
T Consensus       234 ~~~~~~~G~~~~vdgg~~  251 (253)
T PRK08642        234 PWARAVTGQNLVVDGGLV  251 (253)
T ss_pred             chhcCccCCEEEeCCCee
Confidence            988999999999999964

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.1e-35  Score=242.93  Aligned_cols=220  Identities=27%  Similarity=0.404  Sum_probs=175.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc-chhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ..+.+|++|||||++|||+++++.|+++|++|++++|+ .+..+++.++..        +.++.+|++|.+++.++++  
T Consensus         2 ~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~--------~~~~~~D~~~~~~~~~~~~--   71 (237)
T PRK12742          2 GAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG--------ATAVQTDSADRDAVIDVVR--   71 (237)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhC--------CeEEecCCCCHHHHHHHHH--
Confidence            35778999999999999999999999999999888764 444444444331        5678899999998877765  


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhc-cccCCCCchhh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCG-IIGGAATHAYT  152 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~-~~~~~~~~~y~  152 (257)
                        .++++|++|||||....  ....+.+.++|++.+++|+.+++.+.+.+.             |..+ ..+.+....|+
T Consensus        72 --~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~  147 (237)
T PRK12742         72 --KSGALDILVVNAGIAVF--GDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYA  147 (237)
T ss_pred             --HhCCCcEEEECCCCCCC--CCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchH
Confidence              35789999999997654  456778899999999999999998865442             2223 23456678999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      .+|++++.+++.++.++.++||+||.|+||+++|++......... ....  ..+.+++.+|+|+++.+.||+++.+.++
T Consensus       148 ~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~-~~~~--~~~~~~~~~p~~~a~~~~~l~s~~~~~~  224 (237)
T PRK12742        148 ASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKD-MMHS--FMAIKRHGRPEEVAGMVAWLAGPEASFV  224 (237)
T ss_pred             HhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHH-HHHh--cCCCCCCCCHHHHHHHHHHHcCcccCcc
Confidence            999999999999999999999999999999999997543211111 0000  2345678899999999999999999999


Q ss_pred             cccEEEecCcee
Q 044485          233 SGHNLVVDGGFA  244 (257)
Q Consensus       233 ~G~~~~~dgG~~  244 (257)
                      +|+.+.+|||+.
T Consensus       225 ~G~~~~~dgg~~  236 (237)
T PRK12742        225 TGAMHTIDGAFG  236 (237)
T ss_pred             cCCEEEeCCCcC
Confidence            999999999963

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-35  Score=244.52  Aligned_cols=233  Identities=27%  Similarity=0.400  Sum_probs=194.3

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ||..+++|+++|||++++||+++++.|+++|++|++++|+.+.+++..++++...   .++.++++|++|++++++++++
T Consensus         1 ~~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~   77 (250)
T PRK12939          1 MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAG---GRAHAIAADLADPASVQRFFDA   77 (250)
T ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHH
Confidence            4567889999999999999999999999999999999999888777777665432   3488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------hhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------VCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------~~~~~~~~~~~~  150 (257)
                      +.+.++++|+||||+|....  .++.+.+.+++++.++.|+.+++.+.+.+.+               ..+..+.+....
T Consensus        78 ~~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  155 (250)
T PRK12939         78 AAAALGGLDGLVNNAGITNS--KSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGA  155 (250)
T ss_pred             HHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcch
Confidence            99999999999999998765  6678889999999999999999998766642               233344556678


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhh-hhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLK-LADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      |+++|++++.+++.++.+++++||+++.|+||+++|++.+.... .......  ...+..++.+|+|+++.+++++++..
T Consensus       156 y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~l~~~~~  233 (250)
T PRK12939        156 YVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYL--KGRALERLQVPDDVAGAVLFLLSDAA  233 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHH--hcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999998754321 0000000  13345678899999999999999888


Q ss_pred             CcccccEEEecCceee
Q 044485          230 KCVSGHNLVVDGGFAI  245 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~  245 (257)
                      ++++|+.|.+|||..+
T Consensus       234 ~~~~G~~i~~~gg~~~  249 (250)
T PRK12939        234 RFVTGQLLPVNGGFVM  249 (250)
T ss_pred             cCccCcEEEECCCccc
Confidence            8999999999999764

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-35  Score=244.44  Aligned_cols=237  Identities=30%  Similarity=0.468  Sum_probs=193.3

Q ss_pred             cccccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHH
Q 044485            2 HANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIEN   81 (257)
Q Consensus         2 ~~~~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~   81 (257)
                      ++-+-..++++|++|||||+++||.+++++|+++|++|++++|+.+.+++..+++....   .++.++.+|++|++++++
T Consensus         2 ~~~~~~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~---~~~~~~~~Dl~d~~~i~~   78 (259)
T PRK08213          2 MTVLELFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALG---IDALWIAADVADEADIER   78 (259)
T ss_pred             CcchhhhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHH
Confidence            33344457889999999999999999999999999999999999888777777665432   247889999999999999


Q ss_pred             HHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh----------------hccccC
Q 044485           82 AVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV----------------CGIIGG  145 (257)
Q Consensus        82 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~----------------~~~~~~  145 (257)
                      +++++.+.++++|++|||||....  .+..+.+.+.|.+++++|+.+++.+.+.+...                .+..+.
T Consensus        79 ~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~  156 (259)
T PRK08213         79 LAEETLERFGHVDILVNNAGATWG--APAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGN  156 (259)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCC
Confidence            999999998999999999997543  56778899999999999999999987755322                122222


Q ss_pred             C----CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHH
Q 044485          146 A----ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAA  221 (257)
Q Consensus       146 ~----~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  221 (257)
                      +    ....|+++|++++.+++++++++.++||+++.++||+++|++...........  .....+.+++..|+++++.+
T Consensus       157 ~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~va~~~  234 (259)
T PRK08213        157 PPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGED--LLAHTPLGRLGDDEDLKGAA  234 (259)
T ss_pred             CccccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHH--HHhcCCCCCCcCHHHHHHHH
Confidence            2    23789999999999999999999999999999999999998765433211111  11134456778999999999


Q ss_pred             HHhcCCCCCcccccEEEecCceee
Q 044485          222 LYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       222 ~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ++|+++.+.+++|+.+.+|||..+
T Consensus       235 ~~l~~~~~~~~~G~~~~~~~~~~~  258 (259)
T PRK08213        235 LLLASDASKHITGQILAVDGGVSA  258 (259)
T ss_pred             HHHhCccccCccCCEEEECCCeec
Confidence            999999999999999999999764

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-35  Score=245.31  Aligned_cols=237  Identities=27%  Similarity=0.402  Sum_probs=194.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.+.+++..+++...+   .++.++.+|+++++++.++++++.
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   82 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAG---RRAHVVAADLAHPEATAGLAGQAV   82 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999888777777665432   347889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~y  151 (257)
                      +.++++|+||||||....  ..+.+.+.+++++++++|+.+++.+.+.+.                |..+..+.++...|
T Consensus        83 ~~~~~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y  160 (263)
T PRK07814         83 EAFGRLDIVVNNVGGTMP--NPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAY  160 (263)
T ss_pred             HHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchh
Confidence            999999999999997654  567788999999999999999999866652                34455566778899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +++|++++.++++++.|+.+ +|+++.|+||++.|++...... .......+. ..+..+..+|+|+|+.++|++++...
T Consensus       161 ~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  238 (263)
T PRK07814        161 GTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAA-NDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGS  238 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            99999999999999999987 6999999999999987543211 011111111 23445678999999999999998888


Q ss_pred             cccccEEEecCceeeeecceeec
Q 044485          231 CVSGHNLVVDGGFAIVNAGFSVF  253 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~~~~~~~~  253 (257)
                      +++|+.+.+|||...  ++.+..
T Consensus       239 ~~~g~~~~~~~~~~~--~~~~~~  259 (263)
T PRK07814        239 YLTGKTLEVDGGLTF--PNLDLP  259 (263)
T ss_pred             CcCCCEEEECCCccC--CCCCCC
Confidence            999999999999776  444433

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.7e-35  Score=243.16  Aligned_cols=228  Identities=21%  Similarity=0.327  Sum_probs=186.1

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEe-eCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +++|++||||+++|||++++++|+++|++|++. +++.+..++..+++....   .++..+.+|++|.++++++++++.+
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   77 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALG---FDFIASEGNVGDWDSTKAAFDKVKA   77 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            457999999999999999999999999998875 445555555555554322   3477889999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               +..+..+.+....|++
T Consensus        78 ~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~  155 (246)
T PRK12938         78 EVGEIDVLVNNAGITRD--VVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYST  155 (246)
T ss_pred             HhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHH
Confidence            99999999999998654  568888999999999999999999866653               3334455567788999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      +|++++.|++++++|+.++||+++.|+||+++|++.+.....   ..... ...+.+++.+|+++++.++||+++...++
T Consensus       156 sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~  232 (246)
T PRK12938        156 AKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPD---VLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFS  232 (246)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChH---HHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCc
Confidence            999999999999999999999999999999999986543111   00011 12345678899999999999999988999


Q ss_pred             cccEEEecCceee
Q 044485          233 SGHNLVVDGGFAI  245 (257)
Q Consensus       233 ~G~~~~~dgG~~~  245 (257)
                      +|+.+.+|||..+
T Consensus       233 ~g~~~~~~~g~~~  245 (246)
T PRK12938        233 TGADFSLNGGLHM  245 (246)
T ss_pred             cCcEEEECCcccC
Confidence            9999999999653

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=1.7e-35  Score=244.02  Aligned_cols=226  Identities=25%  Similarity=0.366  Sum_probs=186.6

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |.+++++|++||||++++||.+++++|+++|++|++++|+.      .+.   .   ..++.++++|+++++++++++++
T Consensus         2 ~~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~~~---~---~~~~~~~~~D~~~~~~~~~~~~~   69 (252)
T PRK08220          2 NAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------LTQ---E---DYPFATFVLDVSDAAAVAQVCQR   69 (252)
T ss_pred             CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------hhh---c---CCceEEEEecCCCHHHHHHHHHH
Confidence            34578899999999999999999999999999999999986      111   1   12378899999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~  150 (257)
                      +.+.++++|++|||+|....  .++.+.+.+++.+.+++|+.+++.+.+.+.               +..+..+.+....
T Consensus        70 ~~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~  147 (252)
T PRK08220         70 LLAETGPLDVLVNAAGILRM--GATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAA  147 (252)
T ss_pred             HHHHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCch
Confidence            99999999999999998654  567888999999999999999999876653               2233344556778


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc---c----cCc-cccccCCCCCHHHHHHHHH
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG---L----GGM-YSNLKGAVLEPEDAAEAAL  222 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~---~----~~~-~~~~~~~~~~~~~~a~~~~  222 (257)
                      |+++|++++.|++.++.|++++||+++.|.||+++|++...........   .    ..+ ...+.+++..|+|+|++++
T Consensus       148 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  227 (252)
T PRK08220        148 YGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVL  227 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999865432211100   0    001 1345677899999999999


Q ss_pred             HhcCCCCCcccccEEEecCceee
Q 044485          223 YLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       223 ~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ||+++...+++|+.+.+|||..+
T Consensus       228 ~l~~~~~~~~~g~~i~~~gg~~~  250 (252)
T PRK08220        228 FLASDLASHITLQDIVVDGGATL  250 (252)
T ss_pred             HHhcchhcCccCcEEEECCCeec
Confidence            99999989999999999999775

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=1.4e-35  Score=242.28  Aligned_cols=217  Identities=19%  Similarity=0.213  Sum_probs=173.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||++|||++++++|+++|++|++++|+++...+   ++...+     +.++.+|++|+++++++++++.+.++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~~   73 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAID---GLRQAG-----AQCIQADFSTNAGIMAFIDELKQHTD   73 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHH---HHHHcC-----CEEEEcCCCCHHHHHHHHHHHHhhCC
Confidence            5899999999999999999999999999999998764332   222211     67899999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh-----------------hccccCCCCchhhhh
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV-----------------CGIIGGAATHAYTSS  154 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~-----------------~~~~~~~~~~~y~~s  154 (257)
                      ++|++|||||....  ....+.+.++|++++++|+.+++.+.+.+...                 .+..+.+....|+++
T Consensus        74 ~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~as  151 (236)
T PRK06483         74 GLRAIIHNASDWLA--EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAAS  151 (236)
T ss_pred             CccEEEECCccccC--CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHH
Confidence            99999999997644  34567789999999999999999876665432                 222345566789999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      |+|++.|+|+++.|+++ +||+|+|+||++.++..... ......   ....+.++...|+|+++.+.||++  ..+++|
T Consensus       152 Kaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G  224 (236)
T PRK06483        152 KAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGDDA-AYRQKA---LAKSLLKIEPGEEEIIDLVDYLLT--SCYVTG  224 (236)
T ss_pred             HHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCCCH-HHHHHH---hccCccccCCCHHHHHHHHHHHhc--CCCcCC
Confidence            99999999999999988 59999999999977532110 000000   113455678899999999999997  578999


Q ss_pred             cEEEecCceee
Q 044485          235 HNLVVDGGFAI  245 (257)
Q Consensus       235 ~~~~~dgG~~~  245 (257)
                      +++.+|||..+
T Consensus       225 ~~i~vdgg~~~  235 (236)
T PRK06483        225 RSLPVDGGRHL  235 (236)
T ss_pred             cEEEeCccccc
Confidence            99999999765

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-35  Score=243.48  Aligned_cols=231  Identities=27%  Similarity=0.379  Sum_probs=189.2

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEE-eeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~-~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +.+|+++||||+++||++++++|+++|++|++ ..|+.+..++..++++..+   .++.++.+|++|+++++++++++.+
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALG---RKALAVKANVGDVEKIKEMFAQIDE   78 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999876 5788777777777665432   3478899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .++++|+||||+|....  .++.+.+.+++...+++|+.+++.+.+.+.               |..+..+.+....|++
T Consensus        79 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  156 (250)
T PRK08063         79 EFGRLDVFVNNAASGVL--RPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGV  156 (250)
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHH
Confidence            99999999999997654  678889999999999999999999876663               2233345566789999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      +|++++.|+++++.++.++||++++|+||+++|++....... ........ ..+.+++++++|+|+.+++++++...++
T Consensus       157 sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~  235 (250)
T PRK08063        157 SKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR-EELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMI  235 (250)
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc-hHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence            999999999999999999999999999999999886432111 11100001 2344568899999999999999888889


Q ss_pred             cccEEEecCceeee
Q 044485          233 SGHNLVVDGGFAIV  246 (257)
Q Consensus       233 ~G~~~~~dgG~~~~  246 (257)
                      +|+.+.+|||..+.
T Consensus       236 ~g~~~~~~gg~~~~  249 (250)
T PRK08063        236 RGQTIIVDGGRSLL  249 (250)
T ss_pred             cCCEEEECCCeeee
Confidence            99999999998764

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-35  Score=243.62  Aligned_cols=228  Identities=34%  Similarity=0.604  Sum_probs=186.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+.+|+++||||++|||.+++++|+++|++|++++|+....++..+++.        ..++++|++++++++++++++.+
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--------~~~~~~D~~~~~~~~~~~~~~~~   75 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG--------GLFVPTDVTDEDAVNALFDTAAE   75 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC--------CcEEEeeCCCHHHHHHHHHHHHH
Confidence            4778999999999999999999999999999999999877666665542        25789999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccC-CCCchhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGG-AATHAYT  152 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~-~~~~~y~  152 (257)
                      .++++|++|||||...+...++.+.+.+.+++.+++|+.+++.+.+.+.               |..+..+. .....|+
T Consensus        76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~  155 (255)
T PRK06057         76 TYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYT  155 (255)
T ss_pred             HcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchH
Confidence            8899999999999764433457788999999999999999998766553               22233333 3566899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc-cccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD-GLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++|++++.+++.++.++.++||+++.|+||+++|++.......... ........+.+++.+|+|+++.+++|+++...+
T Consensus       156 ~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  235 (255)
T PRK06057        156 ASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASF  235 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            9999999999999999999999999999999999986544221111 111111334567889999999999999999999


Q ss_pred             ccccEEEecCcee
Q 044485          232 VSGHNLVVDGGFA  244 (257)
Q Consensus       232 ~~G~~~~~dgG~~  244 (257)
                      ++|+.+.+|||..
T Consensus       236 ~~g~~~~~~~g~~  248 (255)
T PRK06057        236 ITASTFLVDGGIS  248 (255)
T ss_pred             ccCcEEEECCCee
Confidence            9999999999965

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=4.3e-35  Score=241.87  Aligned_cols=228  Identities=30%  Similarity=0.505  Sum_probs=190.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |+++|||++++||.+++++|+++|++|++++|+.+.+++..+++...+   .++.++.+|++|+++++++++++.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   77 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAG---GKAVAYKLDVSDKDQVFSAIDQAAEKFGG   77 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999877777777665432   34789999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCchhhhhHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~y~~sK~  156 (257)
                      +|+||||+|....  .++.+.+.+++++.+++|+.+++.+.+.+.                |..+..+.+....|+++|+
T Consensus        78 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  155 (254)
T TIGR02415        78 FDVMVNNAGVAPI--TPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKF  155 (254)
T ss_pred             CCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHH
Confidence            9999999998654  578889999999999999999998755442                3345556677889999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccc--------cCc-cccccCCCCCHHHHHHHHHHhcCC
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGL--------GGM-YSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      +++.|++.++.|+.++||+++.|+||+++|++.+..........        ..+ ...+.+++.+|+|+++++.||+++
T Consensus       156 a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  235 (254)
T TIGR02415       156 AVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASE  235 (254)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhccc
Confidence            99999999999999999999999999999998755432211100        001 134456789999999999999999


Q ss_pred             CCCcccccEEEecCceee
Q 044485          228 ESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~  245 (257)
                      ....++|+.+.+|||..+
T Consensus       236 ~~~~~~g~~~~~d~g~~~  253 (254)
T TIGR02415       236 DSDYITGQSILVDGGMVY  253 (254)
T ss_pred             ccCCccCcEEEecCCccC
Confidence            988999999999999754

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-35  Score=245.61  Aligned_cols=222  Identities=27%  Similarity=0.340  Sum_probs=182.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh-------hHhHHHHhccCCCCCCCceeEecCCCCHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-------GESVCKDIGSSSSSASGCSYVHCDVTKEKDIEN   81 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~   81 (257)
                      ++.+|++|||||++|||.+++++|+++|++|++++|+.+.       +++..+++...+   .++.++.+|+++++++.+
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAG---GQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcC---CceEEEEecCCCHHHHHH
Confidence            5788999999999999999999999999999999998643       344445554332   348899999999999999


Q ss_pred             HHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh---------------hccccC-
Q 044485           82 AVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV---------------CGIIGG-  145 (257)
Q Consensus        82 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~---------------~~~~~~-  145 (257)
                      +++++.+.++++|+||||||....  .++.+.+.+++++++++|+.+++.+.+.+...               .+..+. 
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~  157 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAINL--TGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKW  157 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCC--CCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccc
Confidence            999999999999999999998654  56788899999999999999999997777422               122233 


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCC-CccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHH
Q 044485          146 -AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPY-AVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       146 -~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  223 (257)
                       +....|++||+|++.|+++++.|+.++||++|+|+|| +++|++.+.....         ..+..++.+|+++|+.+++
T Consensus       158 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~---------~~~~~~~~~p~~va~~~~~  228 (273)
T PRK08278        158 FAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG---------DEAMRRSRTPEIMADAAYE  228 (273)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc---------cccccccCCHHHHHHHHHH
Confidence             5567999999999999999999999999999999999 6899876543210         1123457899999999999


Q ss_pred             hcCCCCCcccccEEEecCceee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ++++...+++|+.+ +|++...
T Consensus       229 l~~~~~~~~~G~~~-~~~~~~~  249 (273)
T PRK08278        229 ILSRPAREFTGNFL-IDEEVLR  249 (273)
T ss_pred             HhcCccccceeEEE-eccchhh
Confidence            99998889999977 6777654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.6e-35  Score=242.61  Aligned_cols=232  Identities=38%  Similarity=0.579  Sum_probs=192.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.++++|||||+++||.+++++|+++|++|++++|+.+..++....+..    +.++.++.+|++|+++++++++++.+
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA----GGRAIAVAADVSDEADVEAAVAAALE   77 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc----CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            57789999999999999999999999999999999999887777666643    23488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .++++|+||||+|..... .++.+.+.+++++.+++|+.+++.+.+.+.               +..+..+.+....|+.
T Consensus        78 ~~~~~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~  156 (251)
T PRK07231         78 RFGSVDILVNNAGTTHRN-GPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNA  156 (251)
T ss_pred             HhCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHH
Confidence            999999999999975432 567788999999999999999999876663               3344445666778999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh-ccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD-DGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      +|++++.+++.++.+++++||+++.++||+++|++......... .....+ ...+.+++..|+|+|+++++|+++...+
T Consensus       157 sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  236 (251)
T PRK07231        157 SKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASW  236 (251)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999998665433110 101111 1334566789999999999999988888


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      ++|+.+.+|||..+
T Consensus       237 ~~g~~~~~~gg~~~  250 (251)
T PRK07231        237 ITGVTLVVDGGRCV  250 (251)
T ss_pred             CCCCeEEECCCccC
Confidence            99999999999754

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=6e-35  Score=241.99  Aligned_cols=235  Identities=30%  Similarity=0.459  Sum_probs=192.3

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ||.++++|++|||||+++||.+++++|+++|++|++++|+++..++..++++..+   .++.++++|++|.+++++++++
T Consensus         1 ~~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~   77 (262)
T PRK13394          1 MMSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAG---GKAIGVAMDVTNEDAVNAGIDK   77 (262)
T ss_pred             CcccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcC---ceEEEEECCCCCHHHHHHHHHH
Confidence            4557889999999999999999999999999999999999988888877775432   3478899999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh----------------hccccCCCCc
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV----------------CGIIGGAATH  149 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~----------------~~~~~~~~~~  149 (257)
                      +.+.++++|+||||+|....  .++.+.+.+++++.+++|+.+++.+.+.++..                .+..+.+...
T Consensus        78 ~~~~~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~  155 (262)
T PRK13394         78 VAERFGSVDILVSNAGIQIV--NPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKS  155 (262)
T ss_pred             HHHHcCCCCEEEECCccCCC--CchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCc
Confidence            99999999999999998654  56677889999999999999988876655332                2333445567


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc--------ccCcc--ccccCCCCCHHHHHH
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG--------LGGMY--SNLKGAVLEPEDAAE  219 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~--------~~~~~--~~~~~~~~~~~~~a~  219 (257)
                      .|+++|++++.++|.++.++.+.||++++|+||+++|++...........        .....  ..+.+++++++|+++
T Consensus       156 ~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  235 (262)
T PRK13394        156 AYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQ  235 (262)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            89999999999999999999999999999999999999765432211000        00001  223457899999999


Q ss_pred             HHHHhcCCCCCcccccEEEecCceee
Q 044485          220 AALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       220 ~~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      +++++++.....++|+.+.+|||..+
T Consensus       236 a~~~l~~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        236 TVLFLSSFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             HHHHHcCccccCCcCCEEeeCCceec
Confidence            99999998777899999999999765

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=4.5e-35  Score=240.35  Aligned_cols=227  Identities=26%  Similarity=0.434  Sum_probs=189.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||+++||++++++|+++|+.|++.+|+.+.+++..+.+.      .++.++.+|+++.++++++++++.+
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELG------ERVKIFPANLSDRDEVKALGQKAEA   76 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC------CceEEEEccCCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999998877776655442      2378899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .++++|++|||||....  .++.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+....|+.
T Consensus        77 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  154 (245)
T PRK12936         77 DLEGVDILVNNAGITKD--GLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCA  154 (245)
T ss_pred             HcCCCCEEEECCCCCCC--CccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHH
Confidence            99999999999998654  567788899999999999999998866552               3345556677889999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      +|+|+..+++.++.++.++||++++|+||+++|++.........+...  ...+..++.+|+++++.+.||+++...+++
T Consensus       155 sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~  232 (245)
T PRK12936        155 SKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIM--GAIPMKRMGTGAEVASAVAYLASSEAAYVT  232 (245)
T ss_pred             HHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHh--cCCCCCCCcCHHHHHHHHHHHcCccccCcC
Confidence            999999999999999999999999999999999876543221111110  123456688999999999999998888899


Q ss_pred             ccEEEecCceee
Q 044485          234 GHNLVVDGGFAI  245 (257)
Q Consensus       234 G~~~~~dgG~~~  245 (257)
                      |+.+.+|||..+
T Consensus       233 G~~~~~~~g~~~  244 (245)
T PRK12936        233 GQTIHVNGGMAM  244 (245)
T ss_pred             CCEEEECCCccc
Confidence            999999999764

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-35  Score=244.19  Aligned_cols=231  Identities=23%  Similarity=0.303  Sum_probs=180.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc----hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD----DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~----~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      ++++|++||||+++|||.++|++|+++|++|+++.++.    +..++..+++....   .++.++++|++++++++++++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~   81 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAG---AKAVAFQADLTTAAAVEKLFD   81 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhC---CcEEEEecCcCCHHHHHHHHH
Confidence            56789999999999999999999999999976665432    33444445443321   347889999999999999999


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh-------------hccccCCCCchh
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV-------------CGIIGGAATHAY  151 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~-------------~~~~~~~~~~~y  151 (257)
                      ++.+.++++|++|||||....  .++.+.+.+++++.+++|+.+++.+.+.+...             ....+.+.+..|
T Consensus        82 ~~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~~~~Y  159 (257)
T PRK12744         82 DAKAAFGRPDIAINTVGKVLK--KPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAY  159 (257)
T ss_pred             HHHHhhCCCCEEEECCcccCC--CCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCCcccc
Confidence            999999999999999998654  56788899999999999999999887666321             111234566789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh-ccccC-cccccc--CCCCCHHHHHHHHHHhcCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD-DGLGG-MYSNLK--GAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-~~~~~-~~~~~~--~~~~~~~~~a~~~~~l~s~  227 (257)
                      ++||+|++.|+++++.|+.++||++++++||+++|++......... ..... ....+.  .++..|+|+++.++||+++
T Consensus       160 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  239 (257)
T PRK12744        160 AGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD  239 (257)
T ss_pred             hhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcc
Confidence            9999999999999999999999999999999999987543211100 00000 001122  2678999999999999996


Q ss_pred             CCCcccccEEEecCceee
Q 044485          228 ESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~  245 (257)
                       +.+++|+.+.+|||..+
T Consensus       240 -~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        240 -GWWITGQTILINGGYTT  256 (257)
T ss_pred             -cceeecceEeecCCccC
Confidence             67899999999999754

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-35  Score=246.89  Aligned_cols=232  Identities=28%  Similarity=0.444  Sum_probs=189.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch-hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD-LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+ ..++..+.+...+   .++.++.+|+++.++++++++++
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~i  118 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEG---VKCLLIPGDVSDEAFCKDAVEET  118 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999864 3444444443322   34789999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhccccCCCCchhhh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCGIIGGAATHAYTS  153 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~~~~~~~~~y~~  153 (257)
                      .+.++++|+||||||..... .++.+.+.++|.+.+++|+.+++.+.+.+..             ..+..+.+....|++
T Consensus       119 ~~~~~~iD~lI~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~  197 (290)
T PRK06701        119 VRELGRLDILVNNAAFQYPQ-QSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSA  197 (290)
T ss_pred             HHHcCCCCEEEECCcccCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHH
Confidence            99999999999999975432 4677899999999999999999998766632             234445566789999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      +|+|++.|+++++.++.++||+++.|+||+++|++......  .+....+ ...+.+++.+|+|+|+.+++|+++.+.++
T Consensus       198 sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~  275 (290)
T PRK06701        198 TKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD--EEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYI  275 (290)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC--HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCc
Confidence            99999999999999999999999999999999987543211  0000011 12345678899999999999999998899


Q ss_pred             cccEEEecCceee
Q 044485          233 SGHNLVVDGGFAI  245 (257)
Q Consensus       233 ~G~~~~~dgG~~~  245 (257)
                      +|+.+.+|||...
T Consensus       276 ~G~~i~idgg~~~  288 (290)
T PRK06701        276 TGQMLHVNGGVIV  288 (290)
T ss_pred             cCcEEEeCCCccc
Confidence            9999999999654

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.5e-35  Score=265.21  Aligned_cols=233  Identities=30%  Similarity=0.515  Sum_probs=192.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+.+|++||||+++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++.+|++|+++++++++++.+
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~   75 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG------PDHHALAMDVSDEAQIREGFEQLHR   75 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CceeEEEeccCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999888777766652      2367899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh----------------hccccCCCCchhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV----------------CGIIGGAATHAYT  152 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~----------------~~~~~~~~~~~y~  152 (257)
                      .++++|+||||||...+...++.+.+.++|++++++|+.+++.+.+.+.+.                .+..+.+....|+
T Consensus        76 ~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~  155 (520)
T PRK06484         76 EFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYS  155 (520)
T ss_pred             HhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHH
Confidence            999999999999975432356788999999999999999999987766433                3344556778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++|+|+++|++++++|+.++||+++.|+||+++|++............... ...+.+++.+|+++++.++||+++...+
T Consensus       156 asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~  235 (520)
T PRK06484        156 ASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASY  235 (520)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            999999999999999999999999999999999998754321100000000 1234456789999999999999999999


Q ss_pred             ccccEEEecCceeeee
Q 044485          232 VSGHNLVVDGGFAIVN  247 (257)
Q Consensus       232 ~~G~~~~~dgG~~~~~  247 (257)
                      ++|+.+.+|||.....
T Consensus       236 ~~G~~~~~~gg~~~~~  251 (520)
T PRK06484        236 ITGSTLVVDGGWTVYG  251 (520)
T ss_pred             ccCceEEecCCeeccc
Confidence            9999999999987553

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-35  Score=247.68  Aligned_cols=223  Identities=24%  Similarity=0.333  Sum_probs=185.4

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +.++++|++|||||++|||.+++++|+++|++|++++|+.+.++++.+++..    ..++..+.+|++|.++++++++++
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~----~~~~~~~~~Dv~d~~~v~~~~~~~   79 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG----DDRVLTVVADVTDLAAMQAAAEEA   79 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC----CCcEEEEEecCCCHHHHHHHHHHH
Confidence            3568899999999999999999999999999999999999888887777642    234677889999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~  152 (257)
                      .+.++++|++|||||+...  .++.+.+.++|++.+++|+.+++.+.+.+.              |..+..+.+....|+
T Consensus        80 ~~~~g~id~vI~nAG~~~~--~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  157 (296)
T PRK05872         80 VERFGGIDVVVANAGIASG--GSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYC  157 (296)
T ss_pred             HHHcCCCCEEEECCCcCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchHHH
Confidence            9999999999999998754  678899999999999999999999876663              334455567778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc--ccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG--LGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +||+++++|+++++.|++++||++++++||+++|++.+.........  .......+.++..+|+|+++.+++++++...
T Consensus       158 asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~  237 (296)
T PRK05872        158 ASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRAR  237 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999876532210000  0001123456788999999999999998887


Q ss_pred             ccccc
Q 044485          231 CVSGH  235 (257)
Q Consensus       231 ~~~G~  235 (257)
                      +++|.
T Consensus       238 ~i~~~  242 (296)
T PRK05872        238 RVYAP  242 (296)
T ss_pred             EEEch
Confidence            77766

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-35  Score=243.12  Aligned_cols=235  Identities=27%  Similarity=0.328  Sum_probs=191.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.+|++||||++++||.+++++|+++|++|++++|+.+..++..+++....+ ..++.++.+|++|+++++++++++.+
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKG-AGAVRYEPADVTDEDQVARAVDAATA   82 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccC-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            57789999999999999999999999999999999998877777666654322 23478899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .++++|++|||+|..... .++.+.+.+++...+++|+.+++.+.+.+.               |..+..+.+....|++
T Consensus        83 ~~~~~d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  161 (276)
T PRK05875         83 WHGRLHGVVHCAGGSETI-GPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGV  161 (276)
T ss_pred             HcCCCCEEEECCCcccCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHH
Confidence            999999999999975332 467778899999999999999998865542               2233344566778999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      +|++++.+++.++.++..+||+++.|+||+++|++..................+.++++.|+|+++++.+|+++...+++
T Consensus       162 sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  241 (276)
T PRK05875        162 TKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWIT  241 (276)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcC
Confidence            99999999999999999999999999999999987643221111000001133456788999999999999998888899


Q ss_pred             ccEEEecCceee
Q 044485          234 GHNLVVDGGFAI  245 (257)
Q Consensus       234 G~~~~~dgG~~~  245 (257)
                      |+++++|+|..+
T Consensus       242 g~~~~~~~g~~~  253 (276)
T PRK05875        242 GQVINVDGGHML  253 (276)
T ss_pred             CCEEEECCCeec
Confidence            999999999876

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=6.4e-35  Score=238.81  Aligned_cols=221  Identities=24%  Similarity=0.372  Sum_probs=185.1

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      +|||||++|||.++|++|+++|++|++++|+. +..++..++++..+   .++.++.+|++|+++++.+++++.+.++++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQG---GNARLLQFDVADRVACRTLLEADIAEHGAY   77 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC---CeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999988754 45556666654432   348899999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------------HhhhccccCCCCchhhhhHHH
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------------LGVCGIIGGAATHAYTSSKHG  157 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------------~s~~~~~~~~~~~~y~~sK~a  157 (257)
                      |++|||+|....  .++.+.+.++|+..+++|+.+++.+.+.+                +|..+..+.+....|+++|++
T Consensus        78 ~~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  155 (239)
T TIGR01831        78 YGVVLNAGITRD--AAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAG  155 (239)
T ss_pred             CEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHH
Confidence            999999998754  56778899999999999999999886543                244456677778899999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEE
Q 044485          158 LLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNL  237 (257)
Q Consensus       158 ~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~  237 (257)
                      ++.++++++.|+.++||+++.|+||+++|++.+........   .....|.+++.+|+|+++.+.||+++.+.+++|+.+
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~  232 (239)
T TIGR01831       156 LIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDE---ALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVI  232 (239)
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHH---HHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEE
Confidence            99999999999999999999999999999987654321111   111345677889999999999999999999999999


Q ss_pred             EecCce
Q 044485          238 VVDGGF  243 (257)
Q Consensus       238 ~~dgG~  243 (257)
                      .+|||.
T Consensus       233 ~~~gg~  238 (239)
T TIGR01831       233 SVNGGM  238 (239)
T ss_pred             EecCCc
Confidence            999995

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.1e-34  Score=238.77  Aligned_cols=230  Identities=31%  Similarity=0.503  Sum_probs=190.9

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +++|++|||||+++||.+++++|+++|++|++++|+.+..+++.+++....   .++.++.+|+++.++++++++++.+.
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~   77 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKG---GNAQAFACDITDRDSVDTAVAAAEQA   77 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457999999999999999999999999999999999887777766665432   23888999999999999999999999


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhh
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSS  154 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~s  154 (257)
                      ++++|++|||+|....  .++.+.+.+++++.+++|+.+++.+.+.+.               +..+..+.+....|+.+
T Consensus        78 ~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~s  155 (250)
T TIGR03206        78 LGPVDVLVNNAGWDKF--GPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAAC  155 (250)
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHH
Confidence            9999999999997643  567788899999999999999999866663               23344455667899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh---ccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD---DGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      |+|++.++++++.++.+.||+++.++||+++|++.........   .....+. ..+.++..+|+|+|+.+.+|+++...
T Consensus       156 K~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  235 (250)
T TIGR03206       156 KGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDAS  235 (250)
T ss_pred             HHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccC
Confidence            9999999999999999899999999999999998665432110   0011111 34456778999999999999999999


Q ss_pred             cccccEEEecCcee
Q 044485          231 CVSGHNLVVDGGFA  244 (257)
Q Consensus       231 ~~~G~~~~~dgG~~  244 (257)
                      +++|+.+.+|||..
T Consensus       236 ~~~g~~~~~~~g~~  249 (250)
T TIGR03206       236 FITGQVLSVSGGLT  249 (250)
T ss_pred             CCcCcEEEeCCCcc
Confidence            99999999999965

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.9e-35  Score=236.90  Aligned_cols=204  Identities=28%  Similarity=0.468  Sum_probs=180.4

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ..+.+|+++|||||++|||+++|++|+++|+.+++.+.+.+..+++.++++..+    +++.+.||+++.+++.+..+++
T Consensus        33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g----~~~~y~cdis~~eei~~~a~~V  108 (300)
T KOG1201|consen   33 LKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG----EAKAYTCDISDREEIYRLAKKV  108 (300)
T ss_pred             hhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC----ceeEEEecCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999999999999998663    5999999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y  151 (257)
                      ++.+|+||+||||||+...  .++.+.+++++++++++|+.++++.++.|               .|++|..+.++..+|
T Consensus       109 k~e~G~V~ILVNNAGI~~~--~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~Y  186 (300)
T KOG1201|consen  109 KKEVGDVDILVNNAGIVTG--KKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADY  186 (300)
T ss_pred             HHhcCCceEEEeccccccC--CCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhh
Confidence            9999999999999999876  78999999999999999999999998887               477888899999999


Q ss_pred             hhhHHHHHHHHHHHHHHhc---cCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcC
Q 044485          152 TSSKHGLLGLMKNTAVELG---RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~---~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      |+||+|+.+|.++|..|+.   ..||+...|+|+.++|+|... ....         ...-...+|+++|+.++.-..
T Consensus       187 caSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~-~~~~---------~~l~P~L~p~~va~~Iv~ai~  254 (300)
T KOG1201|consen  187 CASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG-ATPF---------PTLAPLLEPEYVAKRIVEAIL  254 (300)
T ss_pred             hhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC-CCCC---------ccccCCCCHHHHHHHHHHHHH
Confidence            9999999999999999985   467999999999999998765 1100         011225689999999887553

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-35  Score=238.79  Aligned_cols=228  Identities=29%  Similarity=0.399  Sum_probs=186.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch-hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD-LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++++|+++||||+++||++++++|+++|++|+++.|+.+ ..++..+++....   .++.++.+|++++++++++++++.
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~   78 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAG---GRAIAVQADVADAAAVTRLFDAAE   78 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHHH
Confidence            567899999999999999999999999999988877643 3455555554322   348899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchhhhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYTSS  154 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y~~s  154 (257)
                      +.++++|++|||||....  .++.+.+.+++++++++|+.+++.+.+.+.             +..+..+.+....|+.+
T Consensus        79 ~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  156 (245)
T PRK12937         79 TAFGRIDVLVNNAGVMPL--GTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAAS  156 (245)
T ss_pred             HHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHH
Confidence            999999999999998654  567888999999999999999999766553             22344456677899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      |++++.++++++.|+.+.||+++.|+||+++|++......  ......+ ...+.++..+|+|+++.+.||+++...+++
T Consensus       157 K~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~  234 (245)
T PRK12937        157 KAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKS--AEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVN  234 (245)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCC--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCcc
Confidence            9999999999999999999999999999999998532110  0001111 134556788999999999999999888999


Q ss_pred             ccEEEecCce
Q 044485          234 GHNLVVDGGF  243 (257)
Q Consensus       234 G~~~~~dgG~  243 (257)
                      |+.+.+|||.
T Consensus       235 g~~~~~~~g~  244 (245)
T PRK12937        235 GQVLRVNGGF  244 (245)
T ss_pred             ccEEEeCCCC
Confidence            9999999985

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=238.32  Aligned_cols=231  Identities=32%  Similarity=0.537  Sum_probs=191.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||+++||.+++++|+++|++|++++|+.+..++..+++. .   +.++.++++|++|+++++++++++.+
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~---~~~~~~~~~D~~~~~~~~~~~~~i~~   77 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-A---GGRAFARQGDVGSAEAVEALVDFVAA   77 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-c---CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5788999999999999999999999999999999999887777666664 1   23488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .++++|+||||+|....  ..+.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+....|+.
T Consensus        78 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~  155 (252)
T PRK06138         78 RWGRLDVLVNNAGFGCG--GTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVA  155 (252)
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHH
Confidence            99999999999998654  567788999999999999999998866553               3344556677789999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh--hccccCcc--ccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA--DDGLGGMY--SNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      +|++++.+++.++.|+..+||++++++||+++|++........  +.......  ..+.+++.+++|+++.+++++++..
T Consensus       156 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~  235 (252)
T PRK06138        156 SKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDES  235 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            9999999999999999999999999999999999866543211  00000001  2334457899999999999999988


Q ss_pred             CcccccEEEecCceee
Q 044485          230 KCVSGHNLVVDGGFAI  245 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~  245 (257)
                      .+++|+.+.+|||+++
T Consensus       236 ~~~~g~~~~~~~g~~~  251 (252)
T PRK06138        236 SFATGTTLVVDGGWLA  251 (252)
T ss_pred             cCccCCEEEECCCeec
Confidence            8999999999999764

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.7e-34  Score=238.84  Aligned_cols=226  Identities=25%  Similarity=0.344  Sum_probs=182.7

Q ss_pred             ccCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEeeCc-----------chhhHhHHHHhccCCCCCCCceeEecCCCC
Q 044485            9 RLQGKVALITGGAR--GIGECTARLFSKHGAKVLIADIK-----------DDLGESVCKDIGSSSSSASGCSYVHCDVTK   75 (257)
Q Consensus         9 ~~~~k~~lItGas~--giG~~ia~~l~~~g~~Vi~~~r~-----------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~   75 (257)
                      ++.+|++|||||++  |||.+++++|+++|++|++++|+           ........+++...+   .+++++.+|+++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~   78 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYG---VRCEHMEIDLSQ   78 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcC---CeEEEEECCCCC
Confidence            46789999999994  99999999999999999999987           222222334443222   348899999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------hh
Q 044485           76 EKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------VC  140 (257)
Q Consensus        76 ~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------~~  140 (257)
                      ++++.++++++.+.++++|+||||||....  .++.+.+.+++++.+++|+.+++.+.+.+..               ..
T Consensus        79 ~~~~~~~~~~~~~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~  156 (256)
T PRK12748         79 PYAPNRVFYAVSERLGDPSILINNAAYSTH--TRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQ  156 (256)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCcc
Confidence            999999999999999999999999998654  6788889999999999999999998776632               22


Q ss_pred             ccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHH
Q 044485          141 GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEA  220 (257)
Q Consensus       141 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  220 (257)
                      +..+.++...|+++|+|++.++++++.|+.++||+++.|+||+++|++........   .  ....+..++.+|+|+++.
T Consensus       157 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~---~--~~~~~~~~~~~~~~~a~~  231 (256)
T PRK12748        157 SLGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHH---L--VPKFPQGRVGEPVDAARL  231 (256)
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHh---h--hccCCCCCCcCHHHHHHH
Confidence            33445567789999999999999999999999999999999999998654321100   0  002233567899999999


Q ss_pred             HHHhcCCCCCcccccEEEecCcee
Q 044485          221 ALYLGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       221 ~~~l~s~~~~~~~G~~~~~dgG~~  244 (257)
                      +.||+++...+++|+++.+|||..
T Consensus       232 ~~~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        232 IAFLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             HHHHhCcccccccCCEEEecCCcc
Confidence            999999988899999999999963

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-35  Score=248.05  Aligned_cols=213  Identities=25%  Similarity=0.363  Sum_probs=178.3

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ||+++.+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+   .++.++.+|++|++++++++++
T Consensus         1 ~~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g---~~~~~~~~Dv~d~~~v~~~~~~   77 (330)
T PRK06139          1 MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALG---AEVLVVPTDVTDADQVKALATQ   77 (330)
T ss_pred             CCcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHH
Confidence            4567889999999999999999999999999999999999999888888776543   3478899999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~  150 (257)
                      +.+.++++|++|||||....  .++.+.+.+++++.+++|+.+++.+.+.++               |..+..+.+....
T Consensus        78 ~~~~~g~iD~lVnnAG~~~~--~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~  155 (330)
T PRK06139         78 AASFGGRIDVWVNNVGVGAV--GRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAA  155 (330)
T ss_pred             HHHhcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchh
Confidence            99988999999999998754  678899999999999999999999866652               4445566677889


Q ss_pred             hhhhHHHHHHHHHHHHHHhccC-CcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRF-GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~-gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      |++||+|+.+|+++|+.|+.++ ||+|+.|+||+++|++.........    .. ..+.....+|+++|+.+++++.+.
T Consensus       156 Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~----~~-~~~~~~~~~pe~vA~~il~~~~~~  229 (330)
T PRK06139        156 YSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTG----RR-LTPPPPVYDPRRVAKAVVRLADRP  229 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccccc----cc-ccCCCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999875 9999999999999998653221111    00 111234679999999999998654

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=2.2e-34  Score=237.85  Aligned_cols=228  Identities=28%  Similarity=0.449  Sum_probs=182.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++....+ ...+.++.+|++|++++.++++++.+.
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~   80 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFK-SKKLSLVELDITDQESLEEFLSKSAEK   80 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcC-CCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            4579999999999999999999999999999999998888877777643221 123667799999999999999999999


Q ss_pred             cCCccEEEeCCCCCCC-CCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------hhccccC--------
Q 044485           90 YGKLDIMFNNAGTVDE-VKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------VCGIIGG--------  145 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------~~~~~~~--------  145 (257)
                      ++++|+|||||+.... ...++.+.+.+++.+.+++|+.+++.+.+.+..               ..+..+.        
T Consensus        81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~  160 (256)
T PRK09186         81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGT  160 (256)
T ss_pred             cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccc
Confidence            9999999999986432 124678899999999999999999988666532               1221111        


Q ss_pred             --CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHH
Q 044485          146 --AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       146 --~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  223 (257)
                        .....|+++|+++++|++.+++|+.++||+++.|+||.+.++...........      ..+..++.+|+|+|+.+++
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~------~~~~~~~~~~~dva~~~~~  234 (256)
T PRK09186        161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKK------CCNGKGMLDPDDICGTLVF  234 (256)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHh------cCCccCCCCHHHhhhhHhh
Confidence              11236999999999999999999999999999999999987653332221111      1223467899999999999


Q ss_pred             hcCCCCCcccccEEEecCcee
Q 044485          224 LGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~  244 (257)
                      ++++...+++|+.+.+|||..
T Consensus       235 l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        235 LLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             eeccccccccCceEEecCCcc
Confidence            999988899999999999965

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.6e-34  Score=237.94  Aligned_cols=228  Identities=31%  Similarity=0.466  Sum_probs=184.9

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCc-chhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      ++||||++|||+++++.|+++|++|++++|+ .+.+++..+++....+. ..+..+.+|++|+++++++++++.+.++++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGE-GVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCC-ceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            8999999999999999999999999999998 66666666665433221 125678999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhHHHH
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKHGL  158 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK~a~  158 (257)
                      |++|||||....  .++.+.+.+++.+++++|+.+++.+.+.+.               +..+..+.+....|+++|+++
T Consensus        81 d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~  158 (251)
T PRK07069         81 SVLVNNAGVGSF--GAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAV  158 (251)
T ss_pred             cEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHH
Confidence            999999998754  567888999999999999999988765553               333445567778999999999


Q ss_pred             HHHHHHHHHHhccCC--cEEEeecCCCccChhhHhHhhh-h-hccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          159 LGLMKNTAVELGRFG--IRVNCVSPYAVSTPLAKDFLKL-A-DDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       159 ~~~~~~l~~e~~~~g--i~v~~i~pg~v~t~~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      +.|+|+++.|+.+++  |+++.|+||+++|++....... . ....... ...+.+++.+|+|+++.+++|+++...+++
T Consensus       159 ~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  238 (251)
T PRK07069        159 ASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVT  238 (251)
T ss_pred             HHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence            999999999998765  9999999999999987643221 0 1111111 133456778999999999999999889999


Q ss_pred             ccEEEecCceee
Q 044485          234 GHNLVVDGGFAI  245 (257)
Q Consensus       234 G~~~~~dgG~~~  245 (257)
                      |+.+.+|||...
T Consensus       239 g~~i~~~~g~~~  250 (251)
T PRK07069        239 GAELVIDGGICA  250 (251)
T ss_pred             CCEEEECCCeec
Confidence            999999999764

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.9e-34  Score=239.92  Aligned_cols=224  Identities=21%  Similarity=0.336  Sum_probs=171.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc-chhhHhHHHHhccCCCCCCCceeEecCCCCHHHH----HHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDI----ENAVNTAV   87 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v----~~~~~~~~   87 (257)
                      ++++||||++|||++++++|+++|++|++++|+ .+.+++..+++....+  .++..+.+|++|++++    +++++++.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~d~~~~~~~~~~~~~~~~   79 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRP--NSAVTCQADLSNSATLFSRCEAIIDACF   79 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccC--CceEEEEccCCCchhhHHHHHHHHHHHH
Confidence            689999999999999999999999999988754 5566666666643222  2367799999999866    55566666


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCH-----------HHHHHHHhhhchhhhHHHHHHHhh-----------------
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQ-----------AEFERILSINLVGAFLGRNMLLGV-----------------  139 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~s~-----------------  139 (257)
                      +.++++|+||||||....  .++.+.+.           +++.+++++|+.+++.+.+.+...                 
T Consensus        80 ~~~g~iD~lv~nAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~  157 (267)
T TIGR02685        80 RAFGRCDVLVNNASAFYP--TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVN  157 (267)
T ss_pred             HccCCceEEEECCccCCC--CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEE
Confidence            778899999999997643  33333332           358999999999999987765322                 


Q ss_pred             ----hccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH--hHhhhhhccccCcccccc-CCCC
Q 044485          140 ----CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK--DFLKLADDGLGGMYSNLK-GAVL  212 (257)
Q Consensus       140 ----~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~--~~~~~~~~~~~~~~~~~~-~~~~  212 (257)
                          .+..+.+.+.+|++||+|+++|+++|+.|++++||++++|+||+++++...  .......    .  ..+. .+..
T Consensus       158 ~~s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~----~--~~~~~~~~~  231 (267)
T TIGR02685       158 LCDAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYR----R--KVPLGQREA  231 (267)
T ss_pred             ehhhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHH----H--hCCCCcCCC
Confidence                122344567789999999999999999999999999999999998765321  1111100    0  1122 2567


Q ss_pred             CHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          213 EPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       213 ~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +|+|+++.++||+++.+.+++|+.+.+|||..+.
T Consensus       232 ~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (267)
T TIGR02685       232 SAEQIADVVIFLVSPKAKYITGTCIKVDGGLSLT  265 (267)
T ss_pred             CHHHHHHHHHHHhCcccCCcccceEEECCceecc
Confidence            9999999999999999999999999999998764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-35  Score=235.92  Aligned_cols=210  Identities=17%  Similarity=0.166  Sum_probs=173.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++...+   .++..+.+|++++++++++++++.+
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALT---DNVYSFQLKDFSQESIRHLFDAIEQ   78 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CCeEEEEccCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999888888775543   2478899999999999999999999


Q ss_pred             HcC-CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhccccCCCCchhhhh
Q 044485           89 QYG-KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCGIIGGAATHAYTSS  154 (257)
Q Consensus        89 ~~~-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~~~~~~~~~y~~s  154 (257)
                      +++ ++|++|||||.... ..++.+.+.++|.+.+++|+.+++.+.+.+.+             +.+..+.+.+..|+++
T Consensus        79 ~~g~~iD~li~nag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~Y~as  157 (227)
T PRK08862         79 QFNRAPDVLVNNWTSSPL-PSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQDLTGVESS  157 (227)
T ss_pred             HhCCCCCEEEECCccCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCcchhHHH
Confidence            998 99999999986432 25688899999999999999999887555432             1222344557789999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      |+|+.+|+|+|+.|++++|||||+|+||+++|+....     +..|..          -.++++.+..||++  +.+++|
T Consensus       158 Kaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~-----~~~~~~----------~~~~~~~~~~~l~~--~~~~tg  220 (227)
T PRK08862        158 NALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELD-----AVHWAE----------IQDELIRNTEYIVA--NEYFSG  220 (227)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccC-----HHHHHH----------HHHHHHhheeEEEe--cccccc
Confidence            9999999999999999999999999999999973210     000100          02899999999997  668999


Q ss_pred             cEEEe
Q 044485          235 HNLVV  239 (257)
Q Consensus       235 ~~~~~  239 (257)
                      +.+..
T Consensus       221 ~~~~~  225 (227)
T PRK08862        221 RVVEA  225 (227)
T ss_pred             eEEee
Confidence            98754

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-34  Score=233.58  Aligned_cols=206  Identities=21%  Similarity=0.248  Sum_probs=168.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      +++||||++|||+++++.|+++|++|++++|+.+.+++..+++.        +.++++|++|+++++++++++.+   ++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--------~~~~~~D~~~~~~v~~~~~~~~~---~i   70 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELD--------VDAIVCDNTDPASLEEARGLFPH---HL   70 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc--------CcEEecCCCCHHHHHHHHHHHhh---cC
Confidence            58999999999999999999999999999999887777665542        56789999999999999887653   69


Q ss_pred             cEEEeCCCCCCCC----CCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhhcc---------ccCCCCchhhhhHHHHHH
Q 044485           94 DIMFNNAGTVDEV----KPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGI---------IGGAATHAYTSSKHGLLG  160 (257)
Q Consensus        94 d~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~~~---------~~~~~~~~y~~sK~a~~~  160 (257)
                      |++|||+|.....    ...+.+ +.++|++.+++|+.+++++.+.+.+....         ...+....|+++|+|+.+
T Consensus        71 d~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~Y~asKaal~~  149 (223)
T PRK05884         71 DTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENPPAGSAEAAIKAALSN  149 (223)
T ss_pred             cEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCCccccHHHHHHHHH
Confidence            9999999853210    012334 57899999999999999998888543211         113456789999999999


Q ss_pred             HHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEec
Q 044485          161 LMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVD  240 (257)
Q Consensus       161 ~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~d  240 (257)
                      |+|.++.|++++|||+|+|+||+++|++.....           ..|   ...|+|+++.+.||+++.+.+++|+.+.+|
T Consensus       150 ~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~-----------~~p---~~~~~~ia~~~~~l~s~~~~~v~G~~i~vd  215 (223)
T PRK05884        150 WTAGQAAVFGTRGITINAVACGRSVQPGYDGLS-----------RTP---PPVAAEIARLALFLTTPAARHITGQTLHVS  215 (223)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCccCchhhhhcc-----------CCC---CCCHHHHHHHHHHHcCchhhccCCcEEEeC
Confidence            999999999999999999999999998753210           111   238999999999999999999999999999


Q ss_pred             Cceee
Q 044485          241 GGFAI  245 (257)
Q Consensus       241 gG~~~  245 (257)
                      ||...
T Consensus       216 gg~~~  220 (223)
T PRK05884        216 HGALA  220 (223)
T ss_pred             CCeec
Confidence            99764

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1e-34  Score=237.01  Aligned_cols=217  Identities=29%  Similarity=0.473  Sum_probs=174.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.+|+++|||+++|||++++++|+++|++|++++|+....      .      ..++.++.+|++++      ++++.+
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~------~~~~~~~~~D~~~~------~~~~~~   63 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L------SGNFHFLQLDLSDD------LEPLFD   63 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c------CCcEEEEECChHHH------HHHHHH
Confidence            57789999999999999999999999999999999875421      0      12378899999987      444555


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .++++|++|||||..... .++.+.+.+++++.+++|+.+++.+.+.+.               +..+..+.+....|+.
T Consensus        64 ~~~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  142 (235)
T PRK06550         64 WVPSVDILCNTAGILDDY-KPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTA  142 (235)
T ss_pred             hhCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHH
Confidence            668999999999975422 457788999999999999999999876663               3334455667789999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccC-ccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGG-MYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      +|++++.++++++.|+.++||+++.|+||+++|++....... ...... ....+.+++.+|+|+|+.++||+++.+.++
T Consensus       143 sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  221 (235)
T PRK06550        143 SKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEP-GGLADWVARETPIKRWAEPEEVAELTLFLASGKADYM  221 (235)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCc-hHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccC
Confidence            999999999999999999999999999999999976432211 000000 113456778999999999999999988999


Q ss_pred             cccEEEecCceee
Q 044485          233 SGHNLVVDGGFAI  245 (257)
Q Consensus       233 ~G~~~~~dgG~~~  245 (257)
                      +|+++.+|||+.+
T Consensus       222 ~g~~~~~~gg~~~  234 (235)
T PRK06550        222 QGTIVPIDGGWTL  234 (235)
T ss_pred             CCcEEEECCceec
Confidence            9999999999765

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=1.8e-34  Score=238.65  Aligned_cols=224  Identities=22%  Similarity=0.291  Sum_probs=176.7

Q ss_pred             EEEEecCCCchHHHHHHHHHH----cCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           14 VALITGGARGIGECTARLFSK----HGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~----~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ++|||||++|||+++|++|++    .|++|++++|+.+.+++..+++....+ ..++.++.+|++++++++++++++.+.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERS-GLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCC-CceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            689999999999999999997    799999999999888888887754221 234889999999999999999999887


Q ss_pred             cCC----ccEEEeCCCCCCCCCCCCCCC-CHHHHHHHHhhhchhhhHHHHHHH-----------------hhhccccCCC
Q 044485           90 YGK----LDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVGAFLGRNMLL-----------------GVCGIIGGAA  147 (257)
Q Consensus        90 ~~~----id~lv~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~-----------------s~~~~~~~~~  147 (257)
                      ++.    +|+||||||..........+. +.+++++.+++|+.+++.+.+.+.                 |..+..+.+.
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~  160 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG  160 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence            664    369999999754322233333 578999999999999998866553                 2233345566


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh-hccccCcc--ccccCCCCCHHHHHHHHHHh
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA-DDGLGGMY--SNLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~a~~~~~l  224 (257)
                      ...|++||+|+++|+++++.|++++||+||+|+||+++|++.+...... +......+  ..+.+++.+|+|+|+.+++|
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l  240 (256)
T TIGR01500       161 WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSL  240 (256)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence            7789999999999999999999999999999999999999876542210 00011111  34557789999999999999


Q ss_pred             cCCCCCcccccEEEe
Q 044485          225 GSDESKCVSGHNLVV  239 (257)
Q Consensus       225 ~s~~~~~~~G~~~~~  239 (257)
                      ++ ..++++|+++..
T Consensus       241 ~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       241 LE-KDKFKSGAHVDY  254 (256)
T ss_pred             Hh-cCCcCCcceeec
Confidence            97 467899998865

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-34  Score=235.70  Aligned_cols=232  Identities=29%  Similarity=0.419  Sum_probs=188.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ..+++|+++||||+++||++++++|+++|++ |++++|+.+..++..+++....   .++.++.+|++++++++++++.+
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~   78 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALG---AKAVFVQADLSDVEDCRRVVAAA   78 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999 9999999877766666663322   34778999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhccccCCCCch
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIGGAATHA  150 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~~~~~~~  150 (257)
                      .+.++++|++|||+|....  .++.+.+.+++.+.+++|+.+++.+.+.+..                ..+..+.+....
T Consensus        79 ~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~  156 (260)
T PRK06198         79 DEAFGRLDALVNAAGLTDR--GTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAA  156 (260)
T ss_pred             HHHhCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcch
Confidence            9999999999999998654  5677889999999999999999988665532                223334456678


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh---hccc-cCc-cccccCCCCCHHHHHHHHHHhc
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA---DDGL-GGM-YSNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~---~~~~-~~~-~~~~~~~~~~~~~~a~~~~~l~  225 (257)
                      |+.+|+++++|+++++.|+...||+++.|+||+++|++........   ...+ ... ...+.+++.+++|+++.+.+|+
T Consensus       157 Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  236 (260)
T PRK06198        157 YCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLL  236 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999998753221110   0000 000 1334567889999999999999


Q ss_pred             CCCCCcccccEEEecCcee
Q 044485          226 SDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       226 s~~~~~~~G~~~~~dgG~~  244 (257)
                      ++...+++|+.+.+|||..
T Consensus       237 ~~~~~~~~G~~~~~~~~~~  255 (260)
T PRK06198        237 SDESGLMTGSVIDFDQSVW  255 (260)
T ss_pred             ChhhCCccCceEeECCccc
Confidence            9988899999999999864

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=6.1e-34  Score=234.10  Aligned_cols=229  Identities=29%  Similarity=0.529  Sum_probs=185.9

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-cchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++.+|+++||||+++||.+++++|+++|++|+++.+ +++..++..+++...+   .++.++++|+++++++.++++++
T Consensus         2 ~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~   78 (247)
T PRK12935          2 VQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEG---HDVYAVQADVSKVEDANRLVEEA   78 (247)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHH
Confidence            3467899999999999999999999999999987654 4555566666664332   34889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||....  ..+.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+++..|
T Consensus        79 ~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  156 (247)
T PRK12935         79 VNHFGKVDILVNNAGITRD--RTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNY  156 (247)
T ss_pred             HHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcch
Confidence            9999999999999998754  567788999999999999999998766553               33455566778899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      +++|+|++++++.++.|+.+.||+++.++||+++|++............  ....+.+++..|+|+++.+++++++. .+
T Consensus       157 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~edva~~~~~~~~~~-~~  233 (247)
T PRK12935        157 SAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKI--VAKIPKKRFGQADEIAKGVVYLCRDG-AY  233 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHH--HHhCCCCCCcCHHHHHHHHHHHcCcc-cC
Confidence            9999999999999999999999999999999999987654322111111  01233456789999999999999764 57


Q ss_pred             ccccEEEecCcee
Q 044485          232 VSGHNLVVDGGFA  244 (257)
Q Consensus       232 ~~G~~~~~dgG~~  244 (257)
                      ++|+.+++|||..
T Consensus       234 ~~g~~~~i~~g~~  246 (247)
T PRK12935        234 ITGQQLNINGGLY  246 (247)
T ss_pred             ccCCEEEeCCCcc
Confidence            9999999999963

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-34  Score=234.91  Aligned_cols=232  Identities=28%  Similarity=0.398  Sum_probs=186.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEe-eCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++.+++++||||+++||.++|++|+++|+.|++. .|+.+.+++..+++....   .++.++++|++|++++.++++++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~d~~~i~~~~~~~   78 (254)
T PRK12746          2 KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNG---GKAFLIEADLNSIDGVKKLVEQL   78 (254)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCcCCHHHHHHHHHHH
Confidence            45778999999999999999999999999998774 687777666666654321   24788999999999999999999


Q ss_pred             HHHc------CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCC
Q 044485           87 VTQY------GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAA  147 (257)
Q Consensus        87 ~~~~------~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~  147 (257)
                      .+.+      +++|++|||||....  ..+.+.+.+.++.++++|+.+++.+.+.+.             +..+..+.++
T Consensus        79 ~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~  156 (254)
T PRK12746         79 KNELQIRVGTSEIDILVNNAGIGTQ--GTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTG  156 (254)
T ss_pred             HHHhccccCCCCccEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCC
Confidence            8876      479999999997654  567788999999999999999999866653             2334445667


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcC
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ...|+++|+|++.++++++.++.++|++++.++||+++|++.+....... ..... ...+.+++..++|+++.+.++++
T Consensus       157 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~  235 (254)
T PRK12746        157 SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPE-IRNFATNSSVFGRIGQVEDIADAVAFLAS  235 (254)
T ss_pred             CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChh-HHHHHHhcCCcCCCCCHHHHHHHHHHHcC
Confidence            78899999999999999999999999999999999999998654321110 00000 02234567899999999999999


Q ss_pred             CCCCcccccEEEecCceee
Q 044485          227 DESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~  245 (257)
                      +...+++|+.++++||..|
T Consensus       236 ~~~~~~~g~~~~i~~~~~~  254 (254)
T PRK12746        236 SDSRWVTGQIIDVSGGFCL  254 (254)
T ss_pred             cccCCcCCCEEEeCCCccC
Confidence            8777899999999999643

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=232.96  Aligned_cols=231  Identities=36%  Similarity=0.541  Sum_probs=191.9

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +++|++||||++++||.+++++|+++|++|++++|+.+..++..+++....   .++.++.+|++|+++++++++++.+.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAG---GKAIGVAMDVTDEEAINAGIDYAVET   78 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457999999999999999999999999999999999988887777765432   34889999999999999999999999


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhh
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSS  154 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~s  154 (257)
                      ++++|+||||+|....  ..+.+.+.++++..+++|+.+++.+.+.+.               |..+..+.++...|+++
T Consensus        79 ~~~~d~vi~~a~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~  156 (258)
T PRK12429         79 FGGVDILVNNAGIQHV--APIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSA  156 (258)
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHH
Confidence            9999999999997654  567788999999999999999998866653               34455566778899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc--c--c----Ccc--ccccCCCCCHHHHHHHHHHh
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG--L--G----GMY--SNLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~--~--~----~~~--~~~~~~~~~~~~~a~~~~~l  224 (257)
                      |++++.+++.++.|+.+.||+++.++||+++|++...........  .  .    ...  ..+.+++++++|+|+.+++|
T Consensus       157 k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  236 (258)
T PRK12429        157 KHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFL  236 (258)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999865432211100  0  0    000  12345688999999999999


Q ss_pred             cCCCCCcccccEEEecCceee
Q 044485          225 GSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       225 ~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      +++....++|+.+.+|||++.
T Consensus       237 ~~~~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        237 ASFAAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             cCccccCccCCeEEeCCCEec
Confidence            988777889999999999864

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-33  Score=233.84  Aligned_cols=230  Identities=29%  Similarity=0.365  Sum_probs=185.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      +|++||||++++||.+++++|+++|++|++++|+. +..++..+.++...   .++.++.+|+++++++.++++++.+.+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALG---VEVIFFPADVADLSAHEAMLDAAQAAW   78 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            48999999999999999999999999999999864 34445555553322   348899999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------------hhccccCCCCc
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------------VCGIIGGAATH  149 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------------~~~~~~~~~~~  149 (257)
                      +++|++|||+|.......++.+.+.+++++.+++|+.+++.+.+.+..                     ..+..+.+...
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  158 (256)
T PRK12745         79 GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRG  158 (256)
T ss_pred             CCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCc
Confidence            999999999998654335678889999999999999999988665522                     23334455667


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      .|+.+|++++.+++.++.|+.++||+++.|+||+++|++............. ....+..++.+|+|+++.+.+++++..
T Consensus       159 ~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~a~~i~~l~~~~~  237 (256)
T PRK12745        159 EYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIA-KGLVPMPRWGEPEDVARAVAALASGDL  237 (256)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhh-hcCCCcCCCcCHHHHHHHHHHHhCCcc
Confidence            8999999999999999999999999999999999999876543211111110 012345668899999999999999888


Q ss_pred             CcccccEEEecCceee
Q 044485          230 KCVSGHNLVVDGGFAI  245 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~  245 (257)
                      .+++|+.+++|||..+
T Consensus       238 ~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        238 PYSTGQAIHVDGGLSI  253 (256)
T ss_pred             cccCCCEEEECCCeec
Confidence            8899999999999775

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=8.2e-34  Score=232.85  Aligned_cols=226  Identities=26%  Similarity=0.436  Sum_probs=183.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch-hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDD-LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      |++||||++++||+++|++|+++|++|++++|+.. ..++..+.....   ..++.++.+|+++++++.++++++.+.++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   79 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFT---EDQVRLKELDVTDTEECAEALAEIEEEEG   79 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhcc---CCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999999854 222232322211   23488999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK~  156 (257)
                      ++|++|||+|....  .++.+.+.+++++.+++|+.+++.+.+.+.               +..+..+.+....|+++|+
T Consensus        80 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~  157 (245)
T PRK12824         80 PVDILVNNAGITRD--SVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKA  157 (245)
T ss_pred             CCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHH
Confidence            99999999998754  567788999999999999999999866552               3334455667789999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccE
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHN  236 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~  236 (257)
                      |+++|++.++.++.++||+++.++||+++|++.+...........  ...+.+++.+++++++.+.+|+++...+++|+.
T Consensus       158 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  235 (245)
T PRK12824        158 GMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIV--NQIPMKRLGTPEEIAAAVAFLVSEAAGFITGET  235 (245)
T ss_pred             HHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHH--hcCCCCCCCCHHHHHHHHHHHcCccccCccCcE
Confidence            999999999999999999999999999999876543221110000  133456678999999999999988888899999


Q ss_pred             EEecCceee
Q 044485          237 LVVDGGFAI  245 (257)
Q Consensus       237 ~~~dgG~~~  245 (257)
                      +.+|||..+
T Consensus       236 ~~~~~g~~~  244 (245)
T PRK12824        236 ISINGGLYM  244 (245)
T ss_pred             EEECCCeec
Confidence            999999754

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-34  Score=232.72  Aligned_cols=219  Identities=26%  Similarity=0.264  Sum_probs=180.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC--HHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK--EKDIENAVNT   85 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~v~~~~~~   85 (257)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.....  .++..+.+|+++  .+++.+++++
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   79 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGH--PEPFAIRFDLMSAEEKEFEQFAAT   79 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCC--CCcceEEeeecccchHHHHHHHHH
Confidence            467889999999999999999999999999999999999888777777654322  236788999986  5789999999


Q ss_pred             HHHHc-CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------hhccccCCCCc
Q 044485           86 AVTQY-GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------VCGIIGGAATH  149 (257)
Q Consensus        86 ~~~~~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------~~~~~~~~~~~  149 (257)
                      +.+.+ +++|++|||||..... .++.+.+.+++.+.+++|+.+++.+.+.+..               ..+..+.+...
T Consensus        80 i~~~~~~~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~  158 (239)
T PRK08703         80 IAEATQGKLDGIVHCAGYFYAL-SPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWG  158 (239)
T ss_pred             HHHHhCCCCCEEEEeccccccC-CCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCcc
Confidence            98888 7899999999975432 4678899999999999999999998776632               23444455567


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccC-CcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRF-GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~-gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      .|++||++++.|++.++.|+.++ +|+|+.|+||+++|++......  .        ....++..+++++..++|++++.
T Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~  228 (239)
T PRK08703        159 GFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHP--G--------EAKSERKSYGDVLPAFVWWASAE  228 (239)
T ss_pred             chHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCC--C--------CCccccCCHHHHHHHHHHHhCcc
Confidence            89999999999999999999887 6999999999999997653211  0        00123568999999999999999


Q ss_pred             CCcccccEEEe
Q 044485          229 SKCVSGHNLVV  239 (257)
Q Consensus       229 ~~~~~G~~~~~  239 (257)
                      +.+++|+++.+
T Consensus       229 ~~~~~g~~~~~  239 (239)
T PRK08703        229 SKGRSGEIVYL  239 (239)
T ss_pred             ccCcCCeEeeC
Confidence            99999998864

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-34  Score=234.14  Aligned_cols=234  Identities=28%  Similarity=0.403  Sum_probs=188.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||+++||++++++|+++|++|++++|+.+..+++.+++....   .++.++.+|++|.++++++++++.
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~   78 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADG---GTAIAVQVDVSDPDSAKAMADATV   78 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999877777766664322   237789999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCC-CCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh------------ccccCCCCchhhhh
Q 044485           88 TQYGKLDIMFNNAGTVDE-VKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC------------GIIGGAATHAYTSS  154 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~------------~~~~~~~~~~y~~s  154 (257)
                      +.++++|+||||||.... ...++.+.+.+++.+.+++|+.+++.+.+.+....            +.........|++|
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~Y~~s  158 (250)
T PRK07774         79 SAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSNFYGLA  158 (250)
T ss_pred             HHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCccccHHH
Confidence            999999999999998642 12467788999999999999999999877775432            11223446689999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      |++++.+++++++++.+.||+++.++||.++|++.+......  ...... ..+..+..+|+|+++.+++++++.....+
T Consensus       159 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~  236 (250)
T PRK07774        159 KVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKE--FVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWIT  236 (250)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHH--HHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcC
Confidence            999999999999999999999999999999999865321110  000111 23344567899999999999988766789


Q ss_pred             ccEEEecCceeee
Q 044485          234 GHNLVVDGGFAIV  246 (257)
Q Consensus       234 G~~~~~dgG~~~~  246 (257)
                      |+.+++|+|..+.
T Consensus       237 g~~~~v~~g~~~~  249 (250)
T PRK07774        237 GQIFNVDGGQIIR  249 (250)
T ss_pred             CCEEEECCCeecc
Confidence            9999999998764

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=5.3e-34  Score=234.55  Aligned_cols=212  Identities=18%  Similarity=0.247  Sum_probs=173.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |+++||||++|||+++|++|+ +|++|++++|+.+.++++.+++...++  .++.++++|++|+++++++++++.+.+|+
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   77 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGA--TSVHVLSFDAQDLDTHRELVKQTQELAGE   77 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccC--CceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999 599999999999998888888765432  23778999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------------HhhhccccCCCCchhhhhHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------------LGVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------------~s~~~~~~~~~~~~y~~sK~  156 (257)
                      +|++|||||....  .++.+.+.+++.+.+++|+.+++.+.+.+                +|..+..+.+....|+++|+
T Consensus        78 id~lv~nag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  155 (246)
T PRK05599         78 ISLAVVAFGILGD--QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKA  155 (246)
T ss_pred             CCEEEEecCcCCC--chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHH
Confidence            9999999998654  34556777888899999999998765444                23445556667789999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccE
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHN  236 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~  236 (257)
                      |+++|+++++.|+.++||+||+|+||+++|++.....             +.....+|+|+|+.+++++++...   +..
T Consensus       156 a~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~-------------~~~~~~~pe~~a~~~~~~~~~~~~---~~~  219 (246)
T PRK05599        156 GLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK-------------PAPMSVYPRDVAAAVVSAITSSKR---STT  219 (246)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC-------------CCCCCCCHHHHHHHHHHHHhcCCC---Cce
Confidence            9999999999999999999999999999999753211             011135899999999999987542   566


Q ss_pred             EEecCceee
Q 044485          237 LVVDGGFAI  245 (257)
Q Consensus       237 ~~~dgG~~~  245 (257)
                      ++++++..+
T Consensus       220 ~~~~~~~~~  228 (246)
T PRK05599        220 LWIPGRLRV  228 (246)
T ss_pred             EEeCccHHH
Confidence            888877543

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-33  Score=233.14  Aligned_cols=230  Identities=27%  Similarity=0.445  Sum_probs=185.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +++++++||||+++|||.++++.|+++|++|++++|+.+.+++..+++...+   .++.++++|++++++++++++.+.+
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALG---TEVRGYAANVTDEEDVEATFAQIAE   78 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4779999999999999999999999999999999999888877777765432   3478899999999999999999988


Q ss_pred             HcCCccEEEeCCCCCCCCC------CC-CCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCC
Q 044485           89 QYGKLDIMFNNAGTVDEVK------PN-ILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGA  146 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~------~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~  146 (257)
                      .++++|+||||+|......      .. ..+.+.+++...+++|+.+++.+.+.+.               +..+..+.+
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~  158 (253)
T PRK08217         79 DFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM  158 (253)
T ss_pred             HcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC
Confidence            8889999999999754310      11 2677889999999999999998755442               222334556


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcC
Q 044485          147 ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       147 ~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ....|+++|+|++.++++++.++.++||++++++||+++|++.............  ...+.+++.+|+|+++.+.+|++
T Consensus       159 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~l~~  236 (253)
T PRK08217        159 GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLE--KMIPVGRLGEPEEIAHTVRFIIE  236 (253)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHH--hcCCcCCCcCHHHHHHHHHHHHc
Confidence            7789999999999999999999999999999999999999987543221111111  13345667899999999999996


Q ss_pred             CCCCcccccEEEecCceee
Q 044485          227 DESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~  245 (257)
                      .  .+++|+.+.+|||..+
T Consensus       237 ~--~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        237 N--DYVTGRVLEIDGGLRL  253 (253)
T ss_pred             C--CCcCCcEEEeCCCccC
Confidence            4  5789999999999854

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-34  Score=233.15  Aligned_cols=226  Identities=30%  Similarity=0.378  Sum_probs=179.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEee-CcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIAD-IKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      |++|||||++|||.++++.|+++|++|+++. |+.+.+++..+++....   .++.+++||++++++++++++++.+.++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAG---GRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            7999999999999999999999999988765 56566666666664322   3488999999999999999999999899


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh------------------hhccccCCC-Cchhh
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG------------------VCGIIGGAA-THAYT  152 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s------------------~~~~~~~~~-~~~y~  152 (257)
                      ++|+||||||...+. .++.+.+.++++..+++|+.+++.+.+.+..                  ..+..+.+. ...|+
T Consensus        80 ~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~  158 (248)
T PRK06947         80 RLDALVNNAGIVAPS-MPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYA  158 (248)
T ss_pred             CCCEEEECCccCCCC-CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccH
Confidence            999999999986432 4577889999999999999999887644322                  222333333 46799


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      ++|++++.|+++++.++.++||+++.|+||+++|++....... ..........+.++..+|+++++.+++++++...++
T Consensus       159 ~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~  237 (248)
T PRK06947        159 GSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQP-GRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYV  237 (248)
T ss_pred             hhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCH-HHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence            9999999999999999999999999999999999975321000 000000012344567899999999999999988899


Q ss_pred             cccEEEecCce
Q 044485          233 SGHNLVVDGGF  243 (257)
Q Consensus       233 ~G~~~~~dgG~  243 (257)
                      +|+.+.+|||.
T Consensus       238 ~G~~~~~~gg~  248 (248)
T PRK06947        238 TGALLDVGGGR  248 (248)
T ss_pred             CCceEeeCCCC
Confidence            99999999984

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-33  Score=231.16  Aligned_cols=224  Identities=31%  Similarity=0.454  Sum_probs=182.0

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ++++++|+++|||++++||.++++.|+++|++|++++|+.+.+++..++..        +.++.+|+++.++++++++. 
T Consensus         4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~--------~~~~~~D~~~~~~v~~~~~~-   74 (245)
T PRK07060          4 AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETG--------CEPLRLDVGDDAAIRAALAA-   74 (245)
T ss_pred             ccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--------CeEEEecCCCHHHHHHHHHH-
Confidence            346889999999999999999999999999999999999877666555431        56788999999988887765 


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCch
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHA  150 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~  150 (257)
                         .+++|++|||+|....  .+..+.+.+++++.+.+|+.+++.+.+.+.                |..+..+.+....
T Consensus        75 ---~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  149 (245)
T PRK07060         75 ---AGAFDGLVNCAGIASL--ESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLA  149 (245)
T ss_pred             ---hCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcH
Confidence               4689999999998654  566678899999999999999999866553                2234455667789


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      |+.+|++++.+++.++.++.+.||+++.++||++.|++.+........ ...+ ...+.+++.+++|+++.+++++++..
T Consensus       150 y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~  228 (245)
T PRK07060        150 YCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQK-SGPMLAAIPLGRFAEVDDVAAPILFLLSDAA  228 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHH-HHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999999999999999986532211100 0111 13445678999999999999999988


Q ss_pred             CcccccEEEecCceee
Q 044485          230 KCVSGHNLVVDGGFAI  245 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~  245 (257)
                      ..++|+.+.+|||+.+
T Consensus       229 ~~~~G~~~~~~~g~~~  244 (245)
T PRK07060        229 SMVSGVSLPVDGGYTA  244 (245)
T ss_pred             CCccCcEEeECCCccC
Confidence            8999999999999864

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-33  Score=235.10  Aligned_cols=215  Identities=25%  Similarity=0.393  Sum_probs=175.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+   .++.++.+|++|+++++++++++.
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~   78 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEG---FDVHGVMCDVRHREEVTHLADEAF   78 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEeCCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988888877775432   347889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~y  151 (257)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.                |..+..+.+....|
T Consensus        79 ~~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y  156 (275)
T PRK05876         79 RLLGHVDVVFSNAGIVVG--GPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAY  156 (275)
T ss_pred             HHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchH
Confidence            999999999999998654  678899999999999999999999876653                33444566777889


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccC-----cc-c-cccCCCCCHHHHHHHHHHh
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGG-----MY-S-NLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~-----~~-~-~~~~~~~~~~~~a~~~~~l  224 (257)
                      +++|+|+.+|++.|+.|++++||++++|+||+++|++..............     .. . .....+.+|+++|+.++..
T Consensus       157 ~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~a  236 (275)
T PRK05876        157 GVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADA  236 (275)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999865432211100000     00 0 1112467999999999977


Q ss_pred             cCC
Q 044485          225 GSD  227 (257)
Q Consensus       225 ~s~  227 (257)
                      +..
T Consensus       237 i~~  239 (275)
T PRK05876        237 ILA  239 (275)
T ss_pred             HHc
Confidence            654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=2.6e-33  Score=229.46  Aligned_cols=225  Identities=24%  Similarity=0.392  Sum_probs=183.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-cchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      |++||||++++||.+++++|+++|++|+++.| +.+..++..+++....   .++.++.+|++|+++++++++++.+.++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALG---FDFRVVEGDVSSFESCKAAVAKVEAELG   77 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhC---CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999888 5555555555443222   3488999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK~  156 (257)
                      ++|+||||+|...+  ..+.+.+.+++.+.+++|+.+++.+.+.+.               +..+..+.+....|+++|+
T Consensus        78 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~  155 (242)
T TIGR01829        78 PIDVLVNNAGITRD--ATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKA  155 (242)
T ss_pred             CCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHH
Confidence            99999999998654  567788999999999999999998765553               3334445566788999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccE
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHN  236 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~  236 (257)
                      +++.|++.+++++.++||+++.+.||+++|++...........+  ....+..++.+|+++++.+.||+++...+++|+.
T Consensus       156 a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~  233 (242)
T TIGR01829       156 GMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSI--VAQIPVGRLGRPEEIAAAVAFLASEEAGYITGAT  233 (242)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHH--HhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCE
Confidence            99999999999999999999999999999987654321110001  0134556788999999999999999888999999


Q ss_pred             EEecCcee
Q 044485          237 LVVDGGFA  244 (257)
Q Consensus       237 ~~~dgG~~  244 (257)
                      +.+|||..
T Consensus       234 ~~~~gg~~  241 (242)
T TIGR01829       234 LSINGGLY  241 (242)
T ss_pred             EEecCCcc
Confidence            99999964

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-33  Score=230.58  Aligned_cols=226  Identities=29%  Similarity=0.382  Sum_probs=178.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-cchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      +|++||||++++||.+++++|+++|++|+++.+ +++..++..+++...+   .++.++.+|++|.++++++++++.+.+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQG---GEALAVAADVADEADVLRLFEAVDREL   78 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCC---CcEEEEEeccCCHHHHHHHHHHHHHHh
Confidence            479999999999999999999999999888874 4444555555554322   237789999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh------------------hhccccCCC-Cchh
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG------------------VCGIIGGAA-THAY  151 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s------------------~~~~~~~~~-~~~y  151 (257)
                      +++|+||||||..... .++.+.+.++|++.+++|+.+++.+.+.+..                  ..+..+.+. ...|
T Consensus        79 ~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y  157 (248)
T PRK06123         79 GRLDALVNNAGILEAQ-MRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDY  157 (248)
T ss_pred             CCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccch
Confidence            9999999999986432 4577889999999999999999987555432                  223334444 3579


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +++|++++.|++.++.++.++||+++.|+||++.|++......  +....... ..|.++..+|+|+++.+.+++++...
T Consensus       158 ~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~  235 (248)
T PRK06123        158 AASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGE--PGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEAS  235 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999999997532110  00000011 34556678999999999999998888


Q ss_pred             cccccEEEecCce
Q 044485          231 CVSGHNLVVDGGF  243 (257)
Q Consensus       231 ~~~G~~~~~dgG~  243 (257)
                      +++|+.+++|||.
T Consensus       236 ~~~g~~~~~~gg~  248 (248)
T PRK06123        236 YTTGTFIDVSGGR  248 (248)
T ss_pred             CccCCEEeecCCC
Confidence            8999999999974

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-33  Score=237.81  Aligned_cols=213  Identities=26%  Similarity=0.342  Sum_probs=177.7

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |+..+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|++++++++++
T Consensus         2 ~~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g---~~~~~v~~Dv~d~~~v~~~~~~   78 (334)
T PRK07109          2 MLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAG---GEALAVVADVADAEAVQAAADR   78 (334)
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC---CcEEEEEecCCCHHHHHHHHHH
Confidence            4457889999999999999999999999999999999999988888887776443   3488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~  150 (257)
                      +.+.++++|++|||||....  .++.+.+.+++++.+++|+.+++++.+.++               |..+..+.+....
T Consensus        79 ~~~~~g~iD~lInnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~  156 (334)
T PRK07109         79 AEEELGPIDTWVNNAMVTVF--GPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSA  156 (334)
T ss_pred             HHHHCCCCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchH
Confidence            99999999999999997654  668889999999999999999998766553               3344455666788


Q ss_pred             hhhhHHHHHHHHHHHHHHhcc--CCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGR--FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~--~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      |+++|++++.|+++++.|+..  .+|+++.|+||.++|++.........     ....+..++.+|+++|+.+++++++.
T Consensus       157 Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~-----~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        157 YCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLP-----VEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhcc-----ccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999975  47999999999999997654321111     11223345789999999999999865

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.1e-33  Score=248.17  Aligned_cols=225  Identities=29%  Similarity=0.426  Sum_probs=184.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc--hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD--DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .+.+|++||||+++|||.+++++|+++|++|++++|..  +.+++..+++.        ..++.+|++|+++++++++++
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~--------~~~~~~Dv~~~~~~~~~~~~~  278 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG--------GTALALDITAPDAPARIAEHL  278 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC--------CeEEEEeCCCHHHHHHHHHHH
Confidence            45789999999999999999999999999999998853  23333333331        457899999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||+...  ..+.+.+.++|+..+++|+.+++.+.+.+.               |..+..+.+....|
T Consensus       279 ~~~~g~id~vi~~AG~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y  356 (450)
T PRK08261        279 AERHGGLDIVVHNAGITRD--KTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNY  356 (450)
T ss_pred             HHhCCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHH
Confidence            9999999999999998765  678889999999999999999999876653               33445566778899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      +++|+++++|+++++.|++++||++|+|+||+++|++.........+....  ..+..+...|+|+++++.||+++.+.+
T Consensus       357 ~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~--~~~l~~~~~p~dva~~~~~l~s~~~~~  434 (450)
T PRK08261        357 AASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRR--MNSLQQGGLPVDVAETIAWLASPASGG  434 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhh--cCCcCCCCCHHHHHHHHHHHhChhhcC
Confidence            999999999999999999999999999999999998865432111111111  122345678999999999999999999


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      ++|+++.+|||..+
T Consensus       435 itG~~i~v~g~~~~  448 (450)
T PRK08261        435 VTGNVVRVCGQSLL  448 (450)
T ss_pred             CCCCEEEECCCccc
Confidence            99999999998765

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.8e-33  Score=226.90  Aligned_cols=229  Identities=36%  Similarity=0.605  Sum_probs=188.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEe-eCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++.+|++|||||+++||.+++++|+++|++|+++ +|+.+..++..+.+...   +.++.++.+|++|+++++++++++.
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE---GGDAIAVKADVSSEEDVENLVEQIV   78 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4667999999999999999999999999999998 89887777776666442   2347889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|++|||+|....  .++.+.+.+++++.+++|+.+++.+.+.+.               +..+..+.+....|+
T Consensus        79 ~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~  156 (247)
T PRK05565         79 EKFGKIDILVNNAGISNF--GLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYS  156 (247)
T ss_pred             HHhCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHH
Confidence            988999999999998743  567788999999999999999998866553               223344556677899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      .+|++++.+++.++.++..+||+++.++||+++|++.+.........+..  ..+.++..+++++++.+++++++....+
T Consensus       157 ~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (247)
T PRK05565        157 ASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAE--EIPLGRLGKPEEIAKVVLFLASDDASYI  234 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHh--cCCCCCCCCHHHHHHHHHHHcCCccCCc
Confidence            99999999999999999999999999999999998765433211111110  2233457799999999999999998899


Q ss_pred             cccEEEecCcee
Q 044485          233 SGHNLVVDGGFA  244 (257)
Q Consensus       233 ~G~~~~~dgG~~  244 (257)
                      +|+.+.+|+|.+
T Consensus       235 ~g~~~~~~~~~~  246 (247)
T PRK05565        235 TGQIITVDGGWT  246 (247)
T ss_pred             cCcEEEecCCcc
Confidence            999999999964

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=224.95  Aligned_cols=223  Identities=28%  Similarity=0.399  Sum_probs=185.0

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |++++++|++||||++++||++++++|+++|++|++++|+.+...+..+++...     .+..+.+|++|.+++++++++
T Consensus         1 ~~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~   75 (239)
T PRK12828          1 MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD-----ALRIGGIDLVDPQAARRAVDE   75 (239)
T ss_pred             CCCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc-----CceEEEeecCCHHHHHHHHHH
Confidence            455788999999999999999999999999999999999887766655555432     266788999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~  150 (257)
                      +.+.++++|++||++|....  ..+.+.+.+++.+.+++|+.+++.+.+.+.               |..+..+.+....
T Consensus        76 ~~~~~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  153 (239)
T PRK12828         76 VNRQFGRLDALVNIAGAFVW--GTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGA  153 (239)
T ss_pred             HHHHhCCcCEEEECCcccCc--CChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcch
Confidence            99999999999999997643  556777899999999999999998766553               2233344556678


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      |+.+|++++.+++.+++++.+.||+++.++||++.+++.+....          ......+++++|+++.+++++++...
T Consensus       154 y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~----------~~~~~~~~~~~dva~~~~~~l~~~~~  223 (239)
T PRK12828        154 YAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMP----------DADFSRWVTPEQIAAVIAFLLSDEAQ  223 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCC----------chhhhcCCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999899999999999999986432211          11123467899999999999998777


Q ss_pred             cccccEEEecCceee
Q 044485          231 CVSGHNLVVDGGFAI  245 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~  245 (257)
                      +++|+.+.+|||..+
T Consensus       224 ~~~g~~~~~~g~~~~  238 (239)
T PRK12828        224 AITGASIPVDGGVAL  238 (239)
T ss_pred             cccceEEEecCCEeC
Confidence            899999999999865

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.2e-32  Score=225.32  Aligned_cols=233  Identities=27%  Similarity=0.363  Sum_probs=184.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc-chhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +++.++++|||||+++||++++++|+++|++|++..|+ .+......+.+...+   .++..+.+|+++++++.++++++
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~   78 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENG---GEGIGVLADVSTREGCETLAKAT   78 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcC---CeeEEEEeccCCHHHHHHHHHHH
Confidence            45778999999999999999999999999998877654 344444444443322   23778999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchhhh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y~~  153 (257)
                      .+.++++|++|||||....  .++.+.+.+.+++.+++|+.+++.+.+.+.             |..+..+.++...|++
T Consensus        79 ~~~~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  156 (252)
T PRK06077         79 IDRYGVADILVNNAGLGLF--SPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGA  156 (252)
T ss_pred             HHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHH
Confidence            9999999999999998654  567788889999999999999999876663             3345556677889999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc--ccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY--SNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      +|++++++++.+++|+++ +|+++.+.||+++|++................  ..+.+++++|+|+|+.++++++..  .
T Consensus       157 sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~--~  233 (252)
T PRK06077        157 MKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIE--S  233 (252)
T ss_pred             HHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCcc--c
Confidence            999999999999999988 99999999999999986543321111000111  123456799999999999999643  4


Q ss_pred             ccccEEEecCceeeeec
Q 044485          232 VSGHNLVVDGGFAIVNA  248 (257)
Q Consensus       232 ~~G~~~~~dgG~~~~~~  248 (257)
                      .+|+.+++|+|..+.++
T Consensus       234 ~~g~~~~i~~g~~~~~~  250 (252)
T PRK06077        234 ITGQVFVLDSGESLKGG  250 (252)
T ss_pred             cCCCeEEecCCeeccCC
Confidence            78999999999988764

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=227.18  Aligned_cols=231  Identities=23%  Similarity=0.267  Sum_probs=180.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc-chhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ...+|++|||||++|||++++++|+++|++|+++.++ .+.++++.+++...+   .++.++.+|++|.+++.++++++.
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~d~~~~~~~~~~~~   82 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALG---RRAVALQADLADEAEVRALVARAS   82 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999999887664 455556666554332   248889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh---------------ccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC---------------GIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~---------------~~~~~~~~~~y~  152 (257)
                      +.++++|+||||||....  .++.+.+.+++++.+++|+.+++.+.+.+....               +..+.+.+..|+
T Consensus        83 ~~~~~iD~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~  160 (258)
T PRK09134         83 AALGPITLLVNNASLFEY--DSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYT  160 (258)
T ss_pred             HHcCCCCEEEECCcCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHH
Confidence            989999999999998654  567888999999999999999999877664321               122334556899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      +||++++.+++.+++++.+. |+++.|+||++.|+..........    .....+.++..+|+|+|+.++++++.  .++
T Consensus       161 ~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~~~d~a~~~~~~~~~--~~~  233 (258)
T PRK09134        161 LSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQSPEDFAR----QHAATPLGRGSTPEEIAAAVRYLLDA--PSV  233 (258)
T ss_pred             HHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccChHHHHH----HHhcCCCCCCcCHHHHHHHHHHHhcC--CCc
Confidence            99999999999999999775 999999999998854221110000    01123345678899999999999974  458


Q ss_pred             cccEEEecCceeeeeccee
Q 044485          233 SGHNLVVDGGFAIVNAGFS  251 (257)
Q Consensus       233 ~G~~~~~dgG~~~~~~~~~  251 (257)
                      +|+.+.+|||..+.....+
T Consensus       234 ~g~~~~i~gg~~~~~~~~~  252 (258)
T PRK09134        234 TGQMIAVDGGQHLAWLTPD  252 (258)
T ss_pred             CCCEEEECCCeeccccccc
Confidence            9999999999876654443

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-33  Score=228.72  Aligned_cols=228  Identities=31%  Similarity=0.457  Sum_probs=185.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||+++||.+++++|+++|++|++++|+.+.+++..+.+..     .++.++++|+.|++++..+++++.++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGD-----ARFVPVACDLTDAASLAAALANAAAERG   76 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-----CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            58999999999999999999999999999999998887777766632     2378899999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh---------------hccccCCCCchhhhhHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV---------------CGIIGGAATHAYTSSKH  156 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~---------------~~~~~~~~~~~y~~sK~  156 (257)
                      ++|++|||+|....  .++.+.+.+++.+.+.+|+.+++.+.+.+...               .+. ...+...|+.+|+
T Consensus        77 ~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-~~~~~~~y~~sK~  153 (257)
T PRK07074         77 PVDVLVANAGAARA--ASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGM-AALGHPAYSAAKA  153 (257)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc-CCCCCcccHHHHH
Confidence            99999999998654  56778889999999999999999887666321               111 2234568999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCccccc
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCVSGH  235 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~  235 (257)
                      +++.++++++.++.++||+++.++||+++|++........+...... ...+..++..++|+++++++|+++...+++|+
T Consensus       154 a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~  233 (257)
T PRK07074        154 GLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGV  233 (257)
T ss_pred             HHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCc
Confidence            99999999999999999999999999999987543211111100000 02344678999999999999999888889999


Q ss_pred             EEEecCceeeee
Q 044485          236 NLVVDGGFAIVN  247 (257)
Q Consensus       236 ~~~~dgG~~~~~  247 (257)
                      .+.+|||.....
T Consensus       234 ~~~~~~g~~~~~  245 (257)
T PRK07074        234 CLPVDGGLTAGN  245 (257)
T ss_pred             EEEeCCCcCcCC
Confidence            999999987654

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-32  Score=224.51  Aligned_cols=227  Identities=31%  Similarity=0.497  Sum_probs=184.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc----chhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK----DDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~----~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      .++.+|+++||||+++||+++++.|+++|++|++++|.    .+..++..+++...+   .++.++.+|+++++++++++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~   78 (249)
T PRK12827          2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAG---GKALGLAFDVRDFAATRAAL   78 (249)
T ss_pred             CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHH
Confidence            34678999999999999999999999999999886653    344444555554322   34889999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAA  147 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~  147 (257)
                      +++.+.++++|++|||+|....  .++.+.+.+++.+.+++|+.+++.+.+.+.                |..+..+.+.
T Consensus        79 ~~~~~~~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  156 (249)
T PRK12827         79 DAGVEEFGRLDILVNNAGIATD--AAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRG  156 (249)
T ss_pred             HHHHHHhCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCC
Confidence            9999988999999999998765  567888999999999999999999876664                2233345566


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCC
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ...|+.+|++++.+++.++.++++.||+++.|+||+++|++....... +..   ....+..++.+++++++.+++++++
T Consensus       157 ~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~-~~~---~~~~~~~~~~~~~~va~~~~~l~~~  232 (249)
T PRK12827        157 QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT-EHL---LNPVPVQRLGEPDEVAALVAFLVSD  232 (249)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH-HHH---HhhCCCcCCcCHHHHHHHHHHHcCc
Confidence            789999999999999999999999999999999999999976543211 000   0023334566999999999999988


Q ss_pred             CCCcccccEEEecCce
Q 044485          228 ESKCVSGHNLVVDGGF  243 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~  243 (257)
                      ....++|+.+.+|||.
T Consensus       233 ~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        233 AASYVTGQVIPVDGGF  248 (249)
T ss_pred             ccCCccCcEEEeCCCC
Confidence            8888999999999985

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=1.4e-32  Score=254.16  Aligned_cols=234  Identities=31%  Similarity=0.441  Sum_probs=187.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ..+.+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++....+. .++..+++|++|+++++++++++.
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~-~~~~~v~~Dvtd~~~v~~a~~~i~  488 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGA-GRAVALKMDVTDEQAVKAAFADVA  488 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCC-CcEEEEECCCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988877776666432221 237789999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~y  151 (257)
                      +.+|++|+||||||....  .++.+.+.++|...+++|+.+++.+.+.+.                |..+..+.+....|
T Consensus       489 ~~~g~iDilV~nAG~~~~--~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY  566 (676)
T TIGR02632       489 LAYGGVDIVVNNAGIATS--SPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAY  566 (676)
T ss_pred             HhcCCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHH
Confidence            999999999999997654  667888999999999999999998754442                33344556677899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccCh--hhHhHhhh--------hhccccC-c-cccccCCCCCHHHHHH
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTP--LAKDFLKL--------ADDGLGG-M-YSNLKGAVLEPEDAAE  219 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~--~~~~~~~~--------~~~~~~~-~-~~~~~~~~~~~~~~a~  219 (257)
                      +++|++++++++.++.|++++||+||+|+||.+.++  +.......        ....... + ...+.++.++|+|+|+
T Consensus       567 ~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~  646 (676)
T TIGR02632       567 SAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAE  646 (676)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHH
Confidence            999999999999999999999999999999998642  21110000        0000001 1 1345567889999999


Q ss_pred             HHHHhcCCCCCcccccEEEecCcee
Q 044485          220 AALYLGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       220 ~~~~l~s~~~~~~~G~~~~~dgG~~  244 (257)
                      ++.+|+++...+++|+++.+|||..
T Consensus       647 av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       647 AVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             HHHHHhCCcccCCcCcEEEECCCch
Confidence            9999999888889999999999964

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=223.93  Aligned_cols=217  Identities=24%  Similarity=0.323  Sum_probs=176.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+|+++||||+++||++++++|+++|++|++++|+.+.      .   ..     ..++.+|++|+++++++++++.+.+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~---~~-----~~~~~~D~~~~~~~~~~~~~~~~~~   67 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------D---FP-----GELFACDLADIEQTAATLAQINEIH   67 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------c---cC-----ceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999999998653      0   01     2468899999999999999998876


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh--------------hccccCCCCchhhhhHH
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV--------------CGIIGGAATHAYTSSKH  156 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~--------------~~~~~~~~~~~y~~sK~  156 (257)
                       ++|++|||+|....  .++.+.+.+++.+.+++|+.+++.+.+.+...              .+..+.+....|+++|+
T Consensus        68 -~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~Y~~sK~  144 (234)
T PRK07577         68 -PVDAIVNNVGIALP--QPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALDRTSYSAAKS  144 (234)
T ss_pred             -CCcEEEECCCCCCC--CChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCCchHHHHHHH
Confidence             58999999998765  56778899999999999999999987666321              22234566788999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCccccc
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCVSGH  235 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~  235 (257)
                      +++.|++.++.|++++||++++|+||+++|++.+............. ...+.++...|+|+|+.+++|+++...+++|+
T Consensus       145 a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~  224 (234)
T PRK07577        145 ALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQ  224 (234)
T ss_pred             HHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccce
Confidence            99999999999999999999999999999998654321111100011 13344556789999999999999888889999


Q ss_pred             EEEecCcee
Q 044485          236 NLVVDGGFA  244 (257)
Q Consensus       236 ~~~~dgG~~  244 (257)
                      .+.+|||..
T Consensus       225 ~~~~~g~~~  233 (234)
T PRK07577        225 VLGVDGGGS  233 (234)
T ss_pred             EEEecCCcc
Confidence            999999965

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=5.1e-32  Score=222.29  Aligned_cols=230  Identities=31%  Similarity=0.537  Sum_probs=185.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch-hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD-LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++++|++||||++++||.+++++|+++|++|+++.|+.+ ..++..+++...   ..++.++.+|+++.+++.++++++.
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL---GGKALAVQGDVSDAESVERAVDEAK   78 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999988887654 345555555432   2348889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------hhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------VCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------~~~~~~~~~~~~y~  152 (257)
                      +.++++|++|||+|....  .++.+.+.+.+.+.+++|+.+++.+.+.+..               ..+..+.+....|+
T Consensus        79 ~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~  156 (248)
T PRK05557         79 AEFGGVDILVNNAGITRD--NLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYA  156 (248)
T ss_pred             HHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhH
Confidence            988999999999998655  5667788999999999999999988666632               23444556678899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      ++|++++.+++.+++++...||+++.++||+++|++.+...........  ...+.+++.+++++++.+.+|+.+....+
T Consensus       157 ~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (248)
T PRK05557        157 ASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAIL--AQIPLGRLGQPEEIASAVAFLASDEAAYI  234 (248)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHH--hcCCCCCCcCHHHHHHHHHHHcCcccCCc
Confidence            9999999999999999999999999999999999876543211111000  12234567899999999999998877889


Q ss_pred             cccEEEecCceee
Q 044485          233 SGHNLVVDGGFAI  245 (257)
Q Consensus       233 ~G~~~~~dgG~~~  245 (257)
                      +|+.+++|||++|
T Consensus       235 ~g~~~~i~~~~~~  247 (248)
T PRK05557        235 TGQTLHVNGGMVM  247 (248)
T ss_pred             cccEEEecCCccC
Confidence            9999999999875

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=222.70  Aligned_cols=233  Identities=31%  Similarity=0.520  Sum_probs=189.2

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |+..+++|++|||||+++||++++++|+++|++|++++|+.+..++..++....     ++.++.+|++|++++++++++
T Consensus         5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~   79 (264)
T PRK12829          5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA-----KVTATVADVADPAQVERVFDT   79 (264)
T ss_pred             HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC-----ceEEEEccCCCHHHHHHHHHH
Confidence            556789999999999999999999999999999999999987777666655322     378899999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCc
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATH  149 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~  149 (257)
                      +.+.++++|+||||+|..... ..+...+.+++.+.+++|+.+++.+.+.+.                +..+..+.+...
T Consensus        80 ~~~~~~~~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~  158 (264)
T PRK12829         80 AVERFGGLDVLVNNAGIAGPT-GGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRT  158 (264)
T ss_pred             HHHHhCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCc
Confidence            999999999999999986332 556778899999999999999998766552                222333456667


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc--------cccCcc-ccccCCCCCHHHHHHH
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD--------GLGGMY-SNLKGAVLEPEDAAEA  220 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~a~~  220 (257)
                      .|+.+|++++.+++.++.++...++++++++||+++|++..........        ...... ..+.+++++++++++.
T Consensus       159 ~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~  238 (264)
T PRK12829        159 PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAAT  238 (264)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            8999999999999999999988999999999999999987654321000        000011 2244568999999999


Q ss_pred             HHHhcCCCCCcccccEEEecCcee
Q 044485          221 ALYLGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       221 ~~~l~s~~~~~~~G~~~~~dgG~~  244 (257)
                      +++++++....++|+.+++|||..
T Consensus       239 ~~~l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        239 ALFLASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             HHHHcCccccCccCcEEEeCCCcc
Confidence            999998766778999999999975

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=6.7e-32  Score=222.19  Aligned_cols=231  Identities=34%  Similarity=0.554  Sum_probs=189.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.+|++|||||+++||.+++++|+++|++|++++|+.+.+++..+++....   .++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG---GKARARQVDVRDRAALKAAVAAGVE   79 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999999877777666664332   2378899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhcc-ccCCCCchhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGI-IGGAATHAYT  152 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~-~~~~~~~~y~  152 (257)
                      .++++|++|||+|....  .++.+.+.+++...++.|+.+++.+.+.+.               +..+. .+.+....|+
T Consensus        80 ~~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~  157 (251)
T PRK12826         80 DFGRLDILVANAGIFPL--TPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYA  157 (251)
T ss_pred             HhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHH
Confidence            99999999999998755  567788999999999999999998866552               22233 4556677899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh-hccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA-DDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      .+|++++.+++.++.++.+.|++++.++||.++|+..+...... .....  ...+.+++.+++|+++.+++++++...+
T Consensus       158 ~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~l~~~~~~~  235 (251)
T PRK12826        158 ASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIA--AAIPLGRLGEPEDIAAAVLFLASDEARY  235 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHH--hcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999998765432211 00000  1234457889999999999999887778


Q ss_pred             ccccEEEecCceeee
Q 044485          232 VSGHNLVVDGGFAIV  246 (257)
Q Consensus       232 ~~G~~~~~dgG~~~~  246 (257)
                      ++|+.+.+|||..+.
T Consensus       236 ~~g~~~~~~~g~~~~  250 (251)
T PRK12826        236 ITGQTLPVDGGATLP  250 (251)
T ss_pred             cCCcEEEECCCccCC
Confidence            999999999998753

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-31  Score=221.04  Aligned_cols=221  Identities=25%  Similarity=0.401  Sum_probs=183.3

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCC--CHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT--KEKDIENAVN   84 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~v~~~~~   84 (257)
                      ...+++|++||||++++||.+++++|+++|++|++++|+.+..++..+++......  ++.++.+|++  ++++++.+++
T Consensus         7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~d~~~~~~~~~~~~~~   84 (247)
T PRK08945          7 PDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGP--QPAIIPLDLLTATPQNYQQLAD   84 (247)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCC--CceEEEecccCCCHHHHHHHHH
Confidence            34578999999999999999999999999999999999988887777777554322  3666777775  7899999999


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCc
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATH  149 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~  149 (257)
                      .+.+.++++|+||||||..... .++.+.+.+++++.+++|+.+++.+.+.+.               +..+..+.+...
T Consensus        85 ~~~~~~~~id~vi~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~  163 (247)
T PRK08945         85 TIEEQFGRLDGVLHNAGLLGEL-GPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWG  163 (247)
T ss_pred             HHHHHhCCCCEEEECCcccCCC-CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCc
Confidence            9999999999999999976442 457788899999999999999999877653               334455667778


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      .|+++|++++.+++.++.++...||++++++||+++|++.......          ....++.+|+++++.++|++++..
T Consensus       164 ~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~  233 (247)
T PRK08945        164 AYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPG----------EDPQKLKTPEDIMPLYLYLMGDDS  233 (247)
T ss_pred             ccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCc----------ccccCCCCHHHHHHHHHHHhCccc
Confidence            9999999999999999999999999999999999999875432211          112357899999999999999988


Q ss_pred             CcccccEEEec
Q 044485          230 KCVSGHNLVVD  240 (257)
Q Consensus       230 ~~~~G~~~~~d  240 (257)
                      .+++|+.+...
T Consensus       234 ~~~~g~~~~~~  244 (247)
T PRK08945        234 RRKNGQSFDAQ  244 (247)
T ss_pred             cccCCeEEeCC
Confidence            89999987543

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=229.00  Aligned_cols=230  Identities=23%  Similarity=0.308  Sum_probs=184.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |+++||||++|||.+++++|+++|++|++++|+.+.+++..+++...+.  ..+.++.+|++|+++++++++++.+.+++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGG--TVPEHRALDISDYDAVAAFAADIHAAHGS   78 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            5799999999999999999999999999999998888777777654322  12556899999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCchhhhhHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~y~~sK~  156 (257)
                      +|+||||+|....  ..+.+.+.++++..+++|+.+++.+.+.+.                |..+..+.+....|+++|+
T Consensus        79 id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  156 (272)
T PRK07832         79 MDVVMNIAGISAW--GTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKF  156 (272)
T ss_pred             CCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHH
Confidence            9999999997643  567889999999999999999999977653                2233345566778999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh----hhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL----ADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      ++++|+++++.|+.++||+++.|+||.++|++.......    .............++..+|+++|+.+++++. ...++
T Consensus       157 a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~-~~~~~  235 (272)
T PRK07832        157 GLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILAGVE-KNRYL  235 (272)
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHh-cCCeE
Confidence            999999999999999999999999999999986543110    0000011111223456899999999999995 45678


Q ss_pred             cccEEEecCceeeee
Q 044485          233 SGHNLVVDGGFAIVN  247 (257)
Q Consensus       233 ~G~~~~~dgG~~~~~  247 (257)
                      +++.+..++|..+.-
T Consensus       236 ~~~~~~~~~~~~~~~  250 (272)
T PRK07832        236 VYTSPDIRALYWFKR  250 (272)
T ss_pred             EecCcchHHHHHHHh
Confidence            899889999876653

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-32  Score=224.88  Aligned_cols=201  Identities=32%  Similarity=0.445  Sum_probs=172.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +++++++|||||++|||++++++|+++|++|++++|+.+.+++..+++.       ++.++.+|++|+++++++++++.+
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~   74 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-------LVVGGPLDVTDPASFAAFLDAVEA   74 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-------cceEEEccCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999888877766653       267899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .++++|++|||||....  .++.+.+.+++++++++|+.+++.+.+.+.               |..+..+.+....|++
T Consensus        75 ~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  152 (273)
T PRK07825         75 DLGPIDVLVNNAGVMPV--GPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCA  152 (273)
T ss_pred             HcCCCCEEEECCCcCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHH
Confidence            99999999999998754  678888999999999999999999876653               4445566777889999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      +|+++.+|+++++.|+.++||+++.|+||+++|++......           .......+|+++|+.+++++.+..
T Consensus       153 sKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~-----------~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        153 SKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG-----------AKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc-----------ccCCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999987643210           011236799999999999987654

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.9e-31  Score=218.59  Aligned_cols=230  Identities=30%  Similarity=0.528  Sum_probs=189.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.+|++|||||+++||.+++++|+++|++|++++|+++..++..+++...+   .++.++.+|++|++++.++++++.+
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAG---GEARVLVFDVSDEAAVRALIEAAVE   78 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999887777766665432   3488899999999999999999988


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .++++|++|||+|....  .+..+.+.+++...++.|+.+++.+.+.+.               +..+..+......|+.
T Consensus        79 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~  156 (246)
T PRK05653         79 AFGALDILVNNAGITRD--ALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSA  156 (246)
T ss_pred             HhCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHh
Confidence            88999999999998655  566788899999999999999998866653               2333445566778999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      +|++++.+++++++++.+.|++++.++||.+.++............+.  ...+.+++++++++++.+.+++++....++
T Consensus       157 sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~~~~~~~~~~~  234 (246)
T PRK05653        157 AKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEIL--KEIPLGRLGQPEEVANAVAFLASDAASYIT  234 (246)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHH--hcCCCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence            999999999999999999999999999999999876532221111111  123345678999999999999988878899


Q ss_pred             ccEEEecCceee
Q 044485          234 GHNLVVDGGFAI  245 (257)
Q Consensus       234 G~~~~~dgG~~~  245 (257)
                      |+.+.+|||..+
T Consensus       235 g~~~~~~gg~~~  246 (246)
T PRK05653        235 GQVIPVNGGMYM  246 (246)
T ss_pred             CCEEEeCCCeeC
Confidence            999999999864

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.3e-31  Score=223.50  Aligned_cols=207  Identities=29%  Similarity=0.340  Sum_probs=166.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+    .     .+.++.+|++|+++++++++++.+.+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~----~-----~~~~~~~Dv~~~~~~~~~~~~~~~~~   72 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS----L-----GVHPLSLDVTDEASIKAAVDTIIAEE   72 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----C-----CCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999999999999876654432    1     27789999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhH
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK  155 (257)
                      +++|+||||||....  .++.+.+.++++..+++|+.+++.+.+.++               |..+..+.+....|+++|
T Consensus        73 ~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  150 (273)
T PRK06182         73 GRIDVLVNNAGYGSY--GAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATK  150 (273)
T ss_pred             CCCCEEEECCCcCCC--CchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHH
Confidence            999999999998654  678889999999999999999988766553               223334455566899999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc-----c--------cCcc-ccccCCCCCHHHHHHHH
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG-----L--------GGMY-SNLKGAVLEPEDAAEAA  221 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~-----~--------~~~~-~~~~~~~~~~~~~a~~~  221 (257)
                      +++++|+++++.|++++||++++|+||+++|++...........     .        ..+. ..+.+++.+|+++|+.+
T Consensus       151 aa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i  230 (273)
T PRK06182        151 FALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAI  230 (273)
T ss_pred             HHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHH
Confidence            99999999999999999999999999999999753221110000     0        0000 12345678999999999


Q ss_pred             HHhcCCC
Q 044485          222 LYLGSDE  228 (257)
Q Consensus       222 ~~l~s~~  228 (257)
                      +++++..
T Consensus       231 ~~~~~~~  237 (273)
T PRK06182        231 SKAVTAR  237 (273)
T ss_pred             HHHHhCC
Confidence            9999853

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=1.6e-31  Score=207.41  Aligned_cols=238  Identities=23%  Similarity=0.249  Sum_probs=190.9

Q ss_pred             cccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         8 ~~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ..++||++||+|-.  ..|++.||+.|.++|+++..++.++ ++++-.+++.+..+   ...+++||+++.++++.++++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~---s~~v~~cDV~~d~~i~~~f~~   77 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELG---SDLVLPCDVTNDESIDALFAT   77 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhcc---CCeEEecCCCCHHHHHHHHHH
Confidence            46899999999977  8999999999999999999999887 33333333322211   156899999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCC--CCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhhcc-------------ccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVD--EVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGI-------------IGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~~~-------------~~~~~~~~  150 (257)
                      +.++.|.+|.|||+-+...  .....+.+.+.|.|...+++..++...+.+.+.+++..             .-.|.+..
T Consensus        78 i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNv  157 (259)
T COG0623          78 IKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNV  157 (259)
T ss_pred             HHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCch
Confidence            9999999999999999865  23457888999999999999999999998888554322             22355667


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      .+.+|+|||+-+|-|+.+++++|||||.|+.|++.|=-..................|.++.+++|||++..+||+|+.++
T Consensus       158 MGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLss  237 (259)
T COG0623         158 MGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSS  237 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchhc
Confidence            88999999999999999999999999999999999843222111100000011156778899999999999999999999


Q ss_pred             cccccEEEecCceeeeecc
Q 044485          231 CVSGHNLVVDGGFAIVNAG  249 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~~~~  249 (257)
                      .+||+++.+|+|.+++.-.
T Consensus       238 giTGei~yVD~G~~i~~m~  256 (259)
T COG0623         238 GITGEIIYVDSGYHIMGMG  256 (259)
T ss_pred             ccccceEEEcCCceeeccC
Confidence            9999999999999998654

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=5e-32  Score=229.82  Aligned_cols=224  Identities=22%  Similarity=0.222  Sum_probs=174.6

Q ss_pred             EEecCCCchHHHHHHHHHHcC-CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCcc
Q 044485           16 LITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLD   94 (257)
Q Consensus        16 lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~id   94 (257)
                      |||||++|||.+++++|+++| ++|++++|+.+..++..+++...   ..++.++.+|++|.++++++++++.+.++++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   77 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP---KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD   77 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence            699999999999999999999 99999999988877777776422   13478899999999999999999998888999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh-----------------cccc-------------
Q 044485           95 IMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC-----------------GIIG-------------  144 (257)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~-----------------~~~~-------------  144 (257)
                      +||||||+.... .++.+.+.++|++.+++|+.+++.+.+.+++..                 +..+             
T Consensus        78 ~lInnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~  156 (308)
T PLN00015         78 VLVCNAAVYLPT-AKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLG  156 (308)
T ss_pred             EEEECCCcCCCC-CCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchh
Confidence            999999975431 346678899999999999999999877664321                 1000             


Q ss_pred             ----------------------CCCCchhhhhHHHHHHHHHHHHHHhcc-CCcEEEeecCCCc-cChhhHhHhhhhhccc
Q 044485          145 ----------------------GAATHAYTSSKHGLLGLMKNTAVELGR-FGIRVNCVSPYAV-STPLAKDFLKLADDGL  200 (257)
Q Consensus       145 ----------------------~~~~~~y~~sK~a~~~~~~~l~~e~~~-~gi~v~~i~pg~v-~t~~~~~~~~~~~~~~  200 (257)
                                            ......|++||+|+..+++.+++++.+ +||++++|+||++ +|++.+..........
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~  236 (308)
T PLN00015        157 DLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLF  236 (308)
T ss_pred             hhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHH
Confidence                                  012356999999999999999999975 6999999999999 7888653211110000


Q ss_pred             cCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCce
Q 044485          201 GGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGF  243 (257)
Q Consensus       201 ~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~  243 (257)
                      ..+...+.+++.+|++.|+.+++++++.....+|+++..||+.
T Consensus       237 ~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        237 PPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             HHHHHHHhcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence            0001122345789999999999999988778999999988863

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=3.2e-31  Score=217.87  Aligned_cols=229  Identities=25%  Similarity=0.348  Sum_probs=179.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +.++++|||||+++||++++++|+++|++|++++|+. +..+...+.+....+  ..+.++.+|++|.+++.++++++.+
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRP--GSAAALQADLLDPDALPELVAACVA   81 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC--CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            5679999999999999999999999999999999864 344555444443222  2378899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh--------------hhccccCCCCchhhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG--------------VCGIIGGAATHAYTSS  154 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s--------------~~~~~~~~~~~~y~~s  154 (257)
                      .++++|+||||||....  .++.+.+.++++..+++|+.+++.+.+.+..              ..+..+.++...|+.+
T Consensus        82 ~~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  159 (249)
T PRK09135         82 AFGRLDALVNNASSFYP--TPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAA  159 (249)
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHH
Confidence            99999999999998654  5677788899999999999999999776632              1223345567789999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      |++++.+++.++.++.+ +++++.++||+++|++......... ........+..+..+++|+++++++++.+ ....+|
T Consensus       160 K~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~~g  236 (249)
T PRK09135        160 KAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEA-RQAILARTPLKRIGTPEDIAEAVRFLLAD-ASFITG  236 (249)
T ss_pred             HHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCHHH-HHHHHhcCCcCCCcCHHHHHHHHHHHcCc-cccccC
Confidence            99999999999999965 7999999999999987542111000 00000123345567899999999888875 455799


Q ss_pred             cEEEecCceee
Q 044485          235 HNLVVDGGFAI  245 (257)
Q Consensus       235 ~~~~~dgG~~~  245 (257)
                      +.+++++|...
T Consensus       237 ~~~~i~~g~~~  247 (249)
T PRK09135        237 QILAVDGGRSL  247 (249)
T ss_pred             cEEEECCCeec
Confidence            99999999864

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=217.62  Aligned_cols=216  Identities=27%  Similarity=0.343  Sum_probs=173.0

Q ss_pred             EEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCccE
Q 044485           16 LITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDI   95 (257)
Q Consensus        16 lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~id~   95 (257)
                      |||||++|||++++++|+++|++|++++|+.+..++..++++.    +.++.++.+|++|++++..++++    .+++|+
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~   72 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG----GAPVRTAALDITDEAAVDAFFAE----AGPFDH   72 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc----CCceEEEEccCCCHHHHHHHHHh----cCCCCE
Confidence            6999999999999999999999999999998777776666642    23478899999999999888875    378999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------HhhhccccCCCCchhhhhHHHHHHHHHH
Q 044485           96 MFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------LGVCGIIGGAATHAYTSSKHGLLGLMKN  164 (257)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------~s~~~~~~~~~~~~y~~sK~a~~~~~~~  164 (257)
                      +|||+|....  .++.+.+.+++++++++|+.+++.+.+..           ++..+..+.+....|+.+|+++++|+|+
T Consensus        73 li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  150 (230)
T PRK07041         73 VVITAADTPG--GPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG  150 (230)
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence            9999998754  56788899999999999999999987632           2344445567778999999999999999


Q ss_pred             HHHHhccCCcEEEeecCCCccChhhHhHhhhhh-ccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCc
Q 044485          165 TAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD-DGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG  242 (257)
Q Consensus       165 l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG  242 (257)
                      ++.|+.+  ||++.++||+++|++......... ....... ..+.++...|+|+|+.+++|+++  .+++|+.+.+|||
T Consensus       151 la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~gg  226 (230)
T PRK07041        151 LALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGSTVLVDGG  226 (230)
T ss_pred             HHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCcEEEeCCC
Confidence            9999975  999999999999998653211100 0000111 23345677899999999999985  4689999999999


Q ss_pred             eee
Q 044485          243 FAI  245 (257)
Q Consensus       243 ~~~  245 (257)
                      ..+
T Consensus       227 ~~~  229 (230)
T PRK07041        227 HAI  229 (230)
T ss_pred             eec
Confidence            764

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.2e-31  Score=216.89  Aligned_cols=230  Identities=32%  Similarity=0.534  Sum_probs=184.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch-hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD-LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+.+|++|||||+|+||++++++|+++|++|+++.|+.. ..++..+.++...   .++.++.+|++++++++++++++.
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~   79 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALG---RRAQAVQADVTDKAALEAAVAAAV   79 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC---CceEEEECCcCCHHHHHHHHHHHH
Confidence            455689999999999999999999999999887666544 4444555544332   348899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|++|||+|....  ..+.+.+.+++...+++|+.+++.+.+.+.               |..+..+.+....|+
T Consensus        80 ~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~  157 (249)
T PRK12825         80 ERFGRIDILVNNAGIFED--KPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYA  157 (249)
T ss_pred             HHcCCCCEEEECCccCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHH
Confidence            888999999999997644  567788899999999999999999877663               223334455667899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      .+|++++++++.+++++.++|++++.++||+++|++............  ....+.+++.+++|+++.+.+++++....+
T Consensus       158 ~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~~~~~~~~~~  235 (249)
T PRK12825        158 AAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK--DAETPLGRSGTPEDIARAVAFLCSDASDYI  235 (249)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh--hccCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            999999999999999999899999999999999998654322111110  112344568899999999999998887789


Q ss_pred             cccEEEecCceee
Q 044485          233 SGHNLVVDGGFAI  245 (257)
Q Consensus       233 ~G~~~~~dgG~~~  245 (257)
                      +|+++.++||..+
T Consensus       236 ~g~~~~i~~g~~~  248 (249)
T PRK12825        236 TGQVIEVTGGVDV  248 (249)
T ss_pred             CCCEEEeCCCEee
Confidence            9999999999754

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=2.5e-31  Score=218.39  Aligned_cols=225  Identities=25%  Similarity=0.342  Sum_probs=178.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEe-eCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      |++|||||+++||++++++|+++|++|+++ .|+.+..++...++...+   .++..+++|++|+++++++++++.+.++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~d~~~i~~~~~~~~~~~~   78 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAG---GKAFVLQADISDENQVVAMFTAIDQHDE   78 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCC---CeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999998764 577666666666654332   2378899999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH------------------hhhccccCCC-Cchhh
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL------------------GVCGIIGGAA-THAYT  152 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~------------------s~~~~~~~~~-~~~y~  152 (257)
                      ++|+||||+|..... .++.+.+.++++..+++|+.+++.+.+.+.                  |..+..+.+. ...|+
T Consensus        79 ~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~  157 (247)
T PRK09730         79 PLAALVNNAGILFTQ-CTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYA  157 (247)
T ss_pred             CCCEEEECCCCCCCC-CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchH
Confidence            999999999975332 457788999999999999999987654432                  2233344444 35799


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++|++++.+++.++.|+.++||++++++||+++|++......  +...... ...+..+..+|+|+++.+++++++...+
T Consensus       158 ~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~  235 (247)
T PRK09730        158 ASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGE--PGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASY  235 (247)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCC--HHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcC
Confidence            999999999999999999999999999999999986432100  0000000 1234455678999999999999988888


Q ss_pred             ccccEEEecCce
Q 044485          232 VSGHNLVVDGGF  243 (257)
Q Consensus       232 ~~G~~~~~dgG~  243 (257)
                      ++|+.+.+|||.
T Consensus       236 ~~g~~~~~~g~~  247 (247)
T PRK09730        236 VTGSFIDLAGGK  247 (247)
T ss_pred             ccCcEEecCCCC
Confidence            999999999973

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-31  Score=215.21  Aligned_cols=213  Identities=26%  Similarity=0.320  Sum_probs=175.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      +.|+++|||++++||++++++|+++|++|++++|+.+..+++.+++....   .++.++.+|++|++++..+++++.+.+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTG---VKAAAYSIDLSNPEAIAPGIAELLEQF   81 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCC---CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999999999999999887777766665432   348889999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhH
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK  155 (257)
                      +++|+||||+|....  .++.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+....|+.+|
T Consensus        82 ~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (241)
T PRK07454         82 GCPDVLINNAGMAYT--GPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSK  159 (241)
T ss_pred             CCCCEEEECCCccCC--CchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHH
Confidence            999999999998654  567788899999999999999999866652               333445566678999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccccc
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGH  235 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~  235 (257)
                      ++++.+++.++.|++++||++++|+||+++|++.....      ...  .....+..+|+++|+.++++++++...+.++
T Consensus       160 ~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~------~~~--~~~~~~~~~~~~va~~~~~l~~~~~~~~~~~  231 (241)
T PRK07454        160 AALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTET------VQA--DFDRSAMLSPEQVAQTILHLAQLPPSAVIED  231 (241)
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccc------ccc--ccccccCCCHHHHHHHHHHHHcCCccceeee
Confidence            99999999999999999999999999999999754210      000  0112346799999999999999876655554


Q ss_pred             E
Q 044485          236 N  236 (257)
Q Consensus       236 ~  236 (257)
                      .
T Consensus       232 ~  232 (241)
T PRK07454        232 L  232 (241)
T ss_pred             E
Confidence            4

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.8e-31  Score=227.16  Aligned_cols=221  Identities=22%  Similarity=0.257  Sum_probs=169.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.+|++|||||++|||.+++++|+++|++|++++|+.+..++..+++.       ++.++.+|++|.++++++++++.+
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-------~v~~~~~Dl~d~~~v~~~~~~~~~   95 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-------GVEVVMLDLADLESVRAFAERFLD   95 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-------hCeEEEccCCCHHHHHHHHHHHHh
Confidence            4688999999999999999999999999999999999887777766653       177899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh---------------cc-----------
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC---------------GI-----------  142 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~---------------~~-----------  142 (257)
                      .++++|+||||||....    ....+.++|+..+++|+.+++.+.+.+.+..               ..           
T Consensus        96 ~~~~iD~li~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~  171 (315)
T PRK06196         96 SGRRIDILINNAGVMAC----PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHF  171 (315)
T ss_pred             cCCCCCEEEECCCCCCC----CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCc
Confidence            88999999999997642    2345677899999999999999877663221               10           


Q ss_pred             -ccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc--cccCcccccc-CCCCCHHHHH
Q 044485          143 -IGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD--GLGGMYSNLK-GAVLEPEDAA  218 (257)
Q Consensus       143 -~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~a  218 (257)
                       .+.+....|+.||++++.|++.++.++.++||++++|+||+++|++.+........  .+......+. .++.+|+++|
T Consensus       172 ~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  251 (315)
T PRK06196        172 TRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGA  251 (315)
T ss_pred             cCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHH
Confidence             11223457999999999999999999999999999999999999986433211000  0000001111 1467899999


Q ss_pred             HHHHHhcCCCCCcccccEEEec
Q 044485          219 EAALYLGSDESKCVSGHNLVVD  240 (257)
Q Consensus       219 ~~~~~l~s~~~~~~~G~~~~~d  240 (257)
                      ..++||++.......|..+..|
T Consensus       252 ~~~~~l~~~~~~~~~~g~~~~~  273 (315)
T PRK06196        252 ATQVWAATSPQLAGMGGLYCED  273 (315)
T ss_pred             HHHHHHhcCCccCCCCCeEeCC
Confidence            9999999765433344444444

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.7e-33  Score=205.47  Aligned_cols=229  Identities=28%  Similarity=0.458  Sum_probs=192.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ..+|-++||||+.+|+|++.+.+|+.+|+.|++.+..+.+-++..+++.      .++.+.+.|++++++++..+...+.
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg------~~~vf~padvtsekdv~aala~ak~   79 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG------GKVVFTPADVTSEKDVRAALAKAKA   79 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC------CceEEeccccCcHHHHHHHHHHHHh
Confidence            4568899999999999999999999999999999998888888888884      3489999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCC----CCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------------hhhccc
Q 044485           89 QYGKLDIMFNNAGTVDEVK----PNILDNDQAEFERILSINLVGAFLGRNMLL---------------------GVCGII  143 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------------s~~~~~  143 (257)
                      +||++|.+|||||+.....    +.-...+.|++++.+++|+.++|++.+...                     |...+-
T Consensus        80 kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd  159 (260)
T KOG1199|consen   80 KFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD  159 (260)
T ss_pred             hccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec
Confidence            9999999999999864321    123456889999999999999999865553                     344444


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHH
Q 044485          144 GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       144 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  223 (257)
                      +..+..+|++||+++..++--+++.++..|||++.|.||.++||+.....+.........+..| .|++.|.|-+..+-.
T Consensus       160 gq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfp-srlg~p~eyahlvqa  238 (260)
T KOG1199|consen  160 GQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFP-SRLGHPHEYAHLVQA  238 (260)
T ss_pred             CccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCc-hhcCChHHHHHHHHH
Confidence            5566779999999999999999999999999999999999999998877665554444333332 478999999999887


Q ss_pred             hcCCCCCcccccEEEecCceeee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +..  ..+++|++|++||-..+.
T Consensus       239 iie--np~lngevir~dgalrm~  259 (260)
T KOG1199|consen  239 IIE--NPYLNGEVIRFDGALRMP  259 (260)
T ss_pred             HHh--CcccCCeEEEecceecCC
Confidence            775  457999999999987653

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=1.7e-30  Score=214.32  Aligned_cols=228  Identities=33%  Similarity=0.533  Sum_probs=185.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++||||++++||++++++|+++|++|++++|+.+..+++.+++....   .++.++.+|++|+++++.+++++.+.++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAG---GSVIYLVADVTKEDEIADMIAAAAAEFG   77 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999999999887777776664332   3488899999999999999999999889


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK~  156 (257)
                      ++|++|||+|....  ....+.+.+++++.++.|+.+++.+.+.+.               +..+..+.+....|+.+|+
T Consensus        78 ~~d~vi~~a~~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~  155 (255)
T TIGR01963        78 GLDILVNNAGIQHV--APIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKH  155 (255)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHH
Confidence            99999999998654  456677889999999999999998866652               2334445566788999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccC--------cc--ccccCCCCCHHHHHHHHHHhcC
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGG--------MY--SNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~--------~~--~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      +++.+++.++.++.++||+++.++||++.+++..............        ..  ..+...+++++|+|++++++++
T Consensus       156 a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~  235 (255)
T TIGR01963       156 GLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLAS  235 (255)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcC
Confidence            9999999999999889999999999999999865432211000000        00  2233457899999999999998


Q ss_pred             CCCCcccccEEEecCcee
Q 044485          227 DESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~  244 (257)
                      +....++|+++.+|||..
T Consensus       236 ~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       236 DAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             ccccCccceEEEEcCccc
Confidence            766678999999999975

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=4e-32  Score=210.51  Aligned_cols=219  Identities=29%  Similarity=0.447  Sum_probs=179.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++++||.+++||+.+|||++++++|+++|+.+.+..-+.++.+.. .++++..+ ..++.+++||+++..++++.++++.
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~-akL~ai~p-~~~v~F~~~DVt~~~~~~~~f~ki~   78 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAI-AKLQAINP-SVSVIFIKCDVTNRGDLEAAFDKIL   78 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHH-HHHhccCC-CceEEEEEeccccHHHHHHHHHHHH
Confidence            367899999999999999999999999999987777777765444 44444433 3559999999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH------------------HhhhccccCCCCc
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML------------------LGVCGIIGGAATH  149 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~------------------~s~~~~~~~~~~~  149 (257)
                      .++|.+|++||+||+..          +.+|++.+++|+.|.++.+...                  +|..|+.|.+-.+
T Consensus        79 ~~fg~iDIlINgAGi~~----------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~p  148 (261)
T KOG4169|consen   79 ATFGTIDILINGAGILD----------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFP  148 (261)
T ss_pred             HHhCceEEEEccccccc----------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccch
Confidence            99999999999999864          3669999999999999876655                  5778888899999


Q ss_pred             hhhhhHHHHHHHHHHHHHH--hccCCcEEEeecCCCccChhhHhHhhh-----hhccccCccccccCCCCCHHHHHHHHH
Q 044485          150 AYTSSKHGLLGLMKNTAVE--LGRFGIRVNCVSPYAVSTPLAKDFLKL-----ADDGLGGMYSNLKGAVLEPEDAAEAAL  222 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e--~~~~gi~v~~i~pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~  222 (257)
                      .|++||+++..|+|+|+..  |.+.||+++.+|||++.|++.+++...     ..+...+.....  ...+|.+++..++
T Consensus       149 VY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~--~~q~~~~~a~~~v  226 (261)
T KOG4169|consen  149 VYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERA--PKQSPACCAINIV  226 (261)
T ss_pred             hhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHc--ccCCHHHHHHHHH
Confidence            9999999999999999885  578899999999999999998877442     011111111111  1458999999999


Q ss_pred             HhcCCCCCcccccEEEecCce
Q 044485          223 YLGSDESKCVSGHNLVVDGGF  243 (257)
Q Consensus       223 ~l~s~~~~~~~G~~~~~dgG~  243 (257)
                      -.....   .+|+.+.+|.|.
T Consensus       227 ~aiE~~---~NGaiw~v~~g~  244 (261)
T KOG4169|consen  227 NAIEYP---KNGAIWKVDSGS  244 (261)
T ss_pred             HHHhhc---cCCcEEEEecCc
Confidence            888763   699999999998

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-31  Score=217.29  Aligned_cols=201  Identities=22%  Similarity=0.311  Sum_probs=167.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||++|||.+++++|+++|++|++++|+.+.+++..+++....    ++.++.+|++|++++.++++++.++++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dl~~~~~i~~~~~~~~~~~g   77 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA----RVSVYAADVRDADALAAAAADFIAAHG   77 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC----eeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            3799999999999999999999999999999999888777766664321    488999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK~  156 (257)
                      ++|++|||+|..... ....+.+.++++..+++|+.+++.+.+.++               |..+..+.+....|++||+
T Consensus        78 ~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~  156 (257)
T PRK07024         78 LPDVVIANAGISVGT-LTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKA  156 (257)
T ss_pred             CCCEEEECCCcCCCc-cccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHH
Confidence            999999999976431 223347889999999999999999876552               4445556677889999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      +++.|+++++.|++++||++++|+||+++|++.....          ..  .....+|+++++.++..+.+..
T Consensus       157 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~----------~~--~~~~~~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        157 AAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP----------YP--MPFLMDADRFAARAARAIARGR  217 (257)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC----------CC--CCCccCHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999999998754210          01  1124689999999999887653

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-30  Score=213.75  Aligned_cols=209  Identities=32%  Similarity=0.480  Sum_probs=174.0

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ||.++.+++++|||++++||.+++++|+++|++|++++|+.+.+++..+++...+   .++.++.+|+++++++.+++++
T Consensus         1 ~~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~   77 (239)
T PRK07666          1 MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYG---VKVVIATADVSDYEEVTAAIEQ   77 (239)
T ss_pred             CCccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC---CeEEEEECCCCCHHHHHHHHHH
Confidence            4556788999999999999999999999999999999999887777766664322   3488899999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~  150 (257)
                      +.+.++++|++|||+|....  ..+.+.+.+++++.+++|+.+++.+.+.+.               +..+..+.+....
T Consensus        78 ~~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~  155 (239)
T PRK07666         78 LKNELGSIDILINNAGISKF--GKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSA  155 (239)
T ss_pred             HHHHcCCccEEEEcCccccC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcc
Confidence            99999999999999997643  567788999999999999999998876663               2334445566778


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      |+.+|++++.+++.++.|++++||+++.|+||+++|++.......         ......+.+++++|+.+..+++..
T Consensus       156 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        156 YSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT---------DGNPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc---------ccCCCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999999999976433110         011234678999999999999765

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=3.2e-31  Score=225.57  Aligned_cols=202  Identities=22%  Similarity=0.258  Sum_probs=159.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..|++++|||||+|||+++|++|+++|++|++++|+.+.++++.+++....+ ..++..+.+|+++  ++.+.++++.+.
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~-~~~~~~~~~Dl~~--~~~~~~~~l~~~  127 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYS-KTQIKTVVVDFSG--DIDEGVKRIKET  127 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCC-CcEEEEEEEECCC--CcHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999888888765332 2347889999985  233334444444


Q ss_pred             cC--CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccc-c-CCCCch
Q 044485           90 YG--KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGII-G-GAATHA  150 (257)
Q Consensus        90 ~~--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~-~-~~~~~~  150 (257)
                      ++  ++|++|||||...+...++.+.+.+++++.+++|+.+++.+.+.+.               |..+.. + .+....
T Consensus       128 ~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~  207 (320)
T PLN02780        128 IEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAV  207 (320)
T ss_pred             hcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchH
Confidence            44  4679999999865433467889999999999999999999877763               333432 2 366789


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      |++||+|+++|+++|+.|++++||+|++|+||+++|++....    .   .    .  ....+|+++|+.++..+..
T Consensus       208 Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~----~---~----~--~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        208 YAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR----R---S----S--FLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc----C---C----C--CCCCCHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999999999986421    0   0    0  0135899999999988854

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.98  E-value=8.6e-31  Score=219.14  Aligned_cols=206  Identities=21%  Similarity=0.252  Sum_probs=165.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc-
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY-   90 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-   90 (257)
                      +|++|||||++|||++++++|+++|++|++++|+.+.++++.+.         .+.++.+|++|.++++++++++.+.+ 
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~---------~~~~~~~Dl~d~~~~~~~~~~~~~~~~   74 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAE---------GLEAFQLDYAEPESIAALVAQVLELSG   74 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC---------CceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            58999999999999999999999999999999998776554321         26789999999999999999998776 


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhhhhH
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~~sK  155 (257)
                      +++|+||||||....  .++.+.+.++++..+++|+.+++.+.+.+               +|..+..+.+....|++||
T Consensus        75 g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  152 (277)
T PRK05993         75 GRLDALFNNGAYGQP--GAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASK  152 (277)
T ss_pred             CCccEEEECCCcCCC--CCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHH
Confidence            689999999998655  66888999999999999999999876655               2444556667778999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcccc-------C--------cc--ccccCCCCCHHHHH
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG-------G--------MY--SNLKGAVLEPEDAA  218 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~-------~--------~~--~~~~~~~~~~~~~a  218 (257)
                      +++++|+++++.|++++||++++|+||+++|++.............       .        ..  ........+|+++|
T Consensus       153 ~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  232 (277)
T PRK05993        153 FAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVY  232 (277)
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHH
Confidence            9999999999999999999999999999999987643221110000       0        00  01112246899999


Q ss_pred             HHHHHhcCCC
Q 044485          219 EAALYLGSDE  228 (257)
Q Consensus       219 ~~~~~l~s~~  228 (257)
                      +.++..+..+
T Consensus       233 ~~i~~a~~~~  242 (277)
T PRK05993        233 AVLLHALTAP  242 (277)
T ss_pred             HHHHHHHcCC
Confidence            9999988654

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.98  E-value=4.1e-31  Score=220.84  Aligned_cols=222  Identities=29%  Similarity=0.303  Sum_probs=175.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+|++|||||+++||++++++|+++|++|++++|+.+.+++..++..      .++..+++|++|+++++++++++.+.+
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYG------DRLLPLALDVTDRAAVFAAVETAVEHF   75 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcc------CCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence            36899999999999999999999999999999999887766655432      237789999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhH
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK  155 (257)
                      +++|++|||||....  .++.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+....|+.+|
T Consensus        76 ~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  153 (275)
T PRK08263         76 GRLDIVVNNAGYGLF--GMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASK  153 (275)
T ss_pred             CCCCEEEECCCCccc--cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHH
Confidence            999999999998754  678889999999999999999998877652               334455666778899999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh------hhccccCcc-ccccCCC-CCHHHHHHHHHHhcCC
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL------ADDGLGGMY-SNLKGAV-LEPEDAAEAALYLGSD  227 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~------~~~~~~~~~-~~~~~~~-~~~~~~a~~~~~l~s~  227 (257)
                      ++++.+++.++.|+++.||+++.++||+++|++.......      .......+. ..+..++ ++|+|+++.+++++++
T Consensus       154 aa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~  233 (275)
T PRK08263        154 WALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDA  233 (275)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999886421100      000000000 1123445 8999999999999976


Q ss_pred             CCCcccccEEEecCc
Q 044485          228 ESKCVSGHNLVVDGG  242 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG  242 (257)
                      ..  ..++++...+.
T Consensus       234 ~~--~~~~~~~~~~~  246 (275)
T PRK08263        234 EN--PPLRLFLGSGV  246 (275)
T ss_pred             CC--CCeEEEeCchH
Confidence            43  35565544443

>PRK05855 short chain dehydrogenase; Validated

Probab=99.98  E-value=3.9e-31  Score=242.20  Aligned_cols=217  Identities=25%  Similarity=0.332  Sum_probs=177.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ..+.++++|||||++|||++++++|+++|++|++++|+.+.++++.++++..+   .++.++.+|++|+++++++++++.
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~  387 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAG---AVAHAYRVDVSDADAMEAFAEWVR  387 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999988888877775443   248899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------------HhhhccccCCCCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------------~s~~~~~~~~~~~~y  151 (257)
                      +.+|++|+||||||....  .++.+.+.+++++++++|+.+++.+.+.+                +|..+..+.+....|
T Consensus       388 ~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y  465 (582)
T PRK05855        388 AEHGVPDIVVNNAGIGMA--GGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAY  465 (582)
T ss_pred             HhcCCCcEEEECCccCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHH
Confidence            999999999999998754  67888999999999999999999986654                244455566778899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh--hccc----cCccccccCCCCCHHHHHHHHHHhc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA--DDGL----GGMYSNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~a~~~~~l~  225 (257)
                      ++||+|+++|+++++.|++++||+|++|+||+++|++........  .+..    ......+..+..+|+++|+.+++.+
T Consensus       466 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~  545 (582)
T PRK05855        466 ATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAV  545 (582)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999866432100  0000    0000111223468999999999999


Q ss_pred             CCCC
Q 044485          226 SDES  229 (257)
Q Consensus       226 s~~~  229 (257)
                      +...
T Consensus       546 ~~~~  549 (582)
T PRK05855        546 KRNK  549 (582)
T ss_pred             HcCC
Confidence            7653

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.98  E-value=9.8e-31  Score=220.35  Aligned_cols=205  Identities=23%  Similarity=0.315  Sum_probs=167.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ..+.+|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|+++++++++++.
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~---~~~~~~~~Dl~d~~~v~~~~~~~~  112 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAG---GDAMAVPCDLSDLDAVDALVADVE  112 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999988888877775432   247889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCC--CHHHHHHHHhhhchhhhHHHHHHH---------------hhhccc-cCCCCc
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDN--DQAEFERILSINLVGAFLGRNMLL---------------GVCGII-GGAATH  149 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~-~~~~~~  149 (257)
                      +.++++|++|||||....  .++.+.  +++++...+++|+.+++.+.+.+.               |..+.. +.+...
T Consensus       113 ~~~g~id~li~~AG~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~  190 (293)
T PRK05866        113 KRIGGVDILINNAGRSIR--RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFS  190 (293)
T ss_pred             HHcCCCCEEEECCCCCCC--cchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcc
Confidence            999999999999998654  334432  468899999999999999876653               111221 245567


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      .|+++|+|+++|+++++.|+.++||++++|+||+++|++......     ..      .....+|+++|+.++..+..+
T Consensus       191 ~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~-----~~------~~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        191 VYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKA-----YD------GLPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccccc-----cc------CCCCCCHHHHHHHHHHHHhcC
Confidence            899999999999999999999999999999999999998643211     00      012468999999999888654

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.98  E-value=8.4e-31  Score=215.94  Aligned_cols=221  Identities=20%  Similarity=0.276  Sum_probs=171.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      |++|||||++|||++++++|+++|++|++++|+. +.+++..+..      ..+++++.+|++++++++++++++.+.++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQY------NSNLTFHSLDLQDVHELETNFNEILSSIQ   75 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhcc------CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            7899999999999999999999999999999986 3443333221      13478899999999999999999887665


Q ss_pred             Cc----cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCchh
Q 044485           92 KL----DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAY  151 (257)
Q Consensus        92 ~i----d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~y  151 (257)
                      ..    +++|+|+|...+. .++.+.+.+++.+.+++|+.+++.+.+.+.                |..+..+.+....|
T Consensus        76 ~~~~~~~~~v~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  154 (251)
T PRK06924         76 EDNVSSIHLINNAGMVAPI-KPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAY  154 (251)
T ss_pred             cccCCceEEEEcceecccC-cccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHH
Confidence            32    2899999976443 467889999999999999999998766553                22333455667789


Q ss_pred             hhhHHHHHHHHHHHHHHhc--cCCcEEEeecCCCccChhhHhHhhhhhccc---cCcc-ccccCCCCCHHHHHHHHHHhc
Q 044485          152 TSSKHGLLGLMKNTAVELG--RFGIRVNCVSPYAVSTPLAKDFLKLADDGL---GGMY-SNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~--~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~a~~~~~l~  225 (257)
                      +++|+|+++|+|.++.|++  +.||++++|.||+++|++............   ..+. ..+.+++.+|+|+|+.+++++
T Consensus       155 ~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  234 (251)
T PRK06924        155 CSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLL  234 (251)
T ss_pred             hHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHH
Confidence            9999999999999999975  578999999999999998654322111110   0111 224467889999999999999


Q ss_pred             CCCCCcccccEEEecC
Q 044485          226 SDESKCVSGHNLVVDG  241 (257)
Q Consensus       226 s~~~~~~~G~~~~~dg  241 (257)
                      ++. .+++|+.+.+|+
T Consensus       235 ~~~-~~~~G~~~~v~~  249 (251)
T PRK06924        235 ETE-DFPNGEVIDIDE  249 (251)
T ss_pred             hcc-cCCCCCEeehhh
Confidence            874 789999998886

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.98  E-value=4.8e-31  Score=217.00  Aligned_cols=224  Identities=22%  Similarity=0.227  Sum_probs=171.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch-hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD-LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++.+|++|||||++|||++++++|+++|++|++++|+.+ .+++..++++..+   .++.++.+|++++++++++++++
T Consensus         2 ~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~   78 (248)
T PRK07806          2 GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAG---GRASAVGADLTDEESVAALMDTA   78 (248)
T ss_pred             CCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHH
Confidence            3577899999999999999999999999999999998753 4555555554322   24788999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh-------------hcc-----ccCCCC
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV-------------CGI-----IGGAAT  148 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~-------------~~~-----~~~~~~  148 (257)
                      .+.++.+|++|||||....  .   ..   ++...+++|+.+++.+.+.+...             .+.     .+.+..
T Consensus        79 ~~~~~~~d~vi~~ag~~~~--~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~  150 (248)
T PRK07806         79 REEFGGLDALVLNASGGME--S---GM---DEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEY  150 (248)
T ss_pred             HHhCCCCcEEEECCCCCCC--C---CC---CcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccc
Confidence            9988999999999986422  1   11   24567889999999886666321             111     112335


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh-hhccccCccccccCCCCCHHHHHHHHHHhcCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL-ADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ..|+.+|++++.+++.++.|++++||++++|.||++.|++....... .+..... ...+.+++++|+|+|+.++++++.
T Consensus       151 ~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l~~~  229 (248)
T PRK07806        151 EPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEA-RREAAGKLYTVSEFAAEVARAVTA  229 (248)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHH-HHhhhcccCCHHHHHHHHHHHhhc
Confidence            68999999999999999999999999999999999999875543211 1110001 123456789999999999999983


Q ss_pred             CCCcccccEEEecCceee
Q 044485          228 ESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~  245 (257)
                        .+++|+.++++||..+
T Consensus       230 --~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        230 --PVPSGHIEYVGGADYF  245 (248)
T ss_pred             --cccCccEEEecCccce
Confidence              4689999999999765

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.98  E-value=7.8e-31  Score=214.13  Aligned_cols=207  Identities=23%  Similarity=0.267  Sum_probs=164.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcC--CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           13 KVALITGGARGIGECTARLFSKHG--AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      |+++||||++|||++++++|+++|  +.|++..|+...  +    ..     ..++.++++|+++.++++++.    +.+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~----~~-----~~~~~~~~~Dls~~~~~~~~~----~~~   65 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D----FQ-----HDNVQWHALDVTDEAEIKQLS----EQF   65 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c----cc-----cCceEEEEecCCCHHHHHHHH----Hhc
Confidence            479999999999999999999985  556666665432  1    11     124788999999999988854    455


Q ss_pred             CCccEEEeCCCCCCCC----CCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh---------------cc---ccCCCC
Q 044485           91 GKLDIMFNNAGTVDEV----KPNILDNDQAEFERILSINLVGAFLGRNMLLGVC---------------GI---IGGAAT  148 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~---------------~~---~~~~~~  148 (257)
                      +++|+||||||.....    ...+.+.+.+.+++.+++|+.+++.+.+.+....               +.   .+.+.+
T Consensus        66 ~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~  145 (235)
T PRK09009         66 TQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGW  145 (235)
T ss_pred             CCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCc
Confidence            7899999999987531    1357788899999999999999999877774321               11   112345


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcc--CCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGR--FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~--~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ..|+++|++++.|+++|+.|+.+  +||+++.|+||+++|++..+...          ..+.+++.+|+++|+.++++++
T Consensus       146 ~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~~~~~a~~~~~l~~  215 (235)
T PRK09009        146 YSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQ----------NVPKGKLFTPEYVAQCLLGIIA  215 (235)
T ss_pred             chhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhh----------ccccCCCCCHHHHHHHHHHHHH
Confidence            68999999999999999999986  69999999999999998654221          2234567899999999999999


Q ss_pred             CCCCcccccEEEecCcee
Q 044485          227 DESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~  244 (257)
                      +...+++|+.+.+|||+.
T Consensus       216 ~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        216 NATPAQSGSFLAYDGETL  233 (235)
T ss_pred             cCChhhCCcEEeeCCcCC
Confidence            988889999999999975

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.98  E-value=5.7e-31  Score=219.39  Aligned_cols=211  Identities=23%  Similarity=0.369  Sum_probs=172.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |++|||||++|||.+++++|+++|++|++++|+.+.+++..+++...+   .++.++.+|+++++++..+++++.+.+++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   77 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAG---GDGFYQRCDVRDYSQLTALAQACEEKWGG   77 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            479999999999999999999999999999999988888777775432   34788999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhHHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKHG  157 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK~a  157 (257)
                      +|+||||||....  ..+.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+....|+++|++
T Consensus        78 id~lI~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa  155 (270)
T PRK05650         78 IDVIVNNAGVASG--GFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAG  155 (270)
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHH
Confidence            9999999998755  567888999999999999999999877653               34455566777899999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          158 LLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       158 ~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      +++|+++++.|+.++||+++.|+||+++|++........+..............++++++|+.++..+.+.
T Consensus       156 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        156 VVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999976543221111000000111123579999999999988754

>PRK08324 short chain dehydrogenase; Validated

Probab=99.98  E-value=1.3e-30  Score=242.11  Aligned_cols=230  Identities=34%  Similarity=0.503  Sum_probs=189.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+.+|++|||||+||||++++++|+++|++|++++|+.+.+++..+++...    .++.++.+|++|+++++++++++.+
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~----~~v~~v~~Dvtd~~~v~~~~~~~~~  494 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP----DRALGVACDVTDEAAVQAAFEEAAL  494 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc----CcEEEEEecCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998887777766432    2488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCchhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~y~  152 (257)
                      .+|++|++|||||....  .++.+.+.++|.+.+++|+.+++.+.+.+.                |..+..+.+....|+
T Consensus       495 ~~g~iDvvI~~AG~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~  572 (681)
T PRK08324        495 AFGGVDIVVSNAGIAIS--GPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYG  572 (681)
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHH
Confidence            99999999999998765  678888999999999999999999865553                223444556678899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCc--cChhhHhHhhh--------hhccccCcc--ccccCCCCCHHHHHHH
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAV--STPLAKDFLKL--------ADDGLGGMY--SNLKGAVLEPEDAAEA  220 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v--~t~~~~~~~~~--------~~~~~~~~~--~~~~~~~~~~~~~a~~  220 (257)
                      ++|++++++++.++.+++++||++|.|+||.+  +|++.......        ........+  ..+.++++.++|+|++
T Consensus       573 asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a  652 (681)
T PRK08324        573 AAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEA  652 (681)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHH
Confidence            99999999999999999999999999999999  77754322110        000000011  3345678899999999


Q ss_pred             HHHhcCCCCCcccccEEEecCcee
Q 044485          221 ALYLGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       221 ~~~l~s~~~~~~~G~~~~~dgG~~  244 (257)
                      +++++++....++|+.+++|||..
T Consensus       653 ~~~l~s~~~~~~tG~~i~vdgG~~  676 (681)
T PRK08324        653 VVFLASGLLSKTTGAIITVDGGNA  676 (681)
T ss_pred             HHHHhCccccCCcCCEEEECCCch
Confidence            999998777789999999999964

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4e-30  Score=213.44  Aligned_cols=207  Identities=28%  Similarity=0.405  Sum_probs=171.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +++++++|||||++|||.+++++|+++|++|++++|+.+.+++...++. ..   .++.++.+|++|+++++.+++.+.+
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~---~~~~~~~~D~~d~~~~~~~~~~~~~   77 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP-YP---GRHRWVVADLTSEAGREAVLARARE   77 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHh-cC---CceEEEEccCCCHHHHHHHHHHHHh
Confidence            5678999999999999999999999999999999999888877776662 21   2488999999999999999998876


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                       ++++|+||||||....  .++.+.+.+++.+.+++|+.+++.+.+.+.               |..+..+.+....|+.
T Consensus        78 -~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  154 (263)
T PRK09072         78 -MGGINVLINNAGVNHF--ALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCA  154 (263)
T ss_pred             -cCCCCEEEECCCCCCc--cccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHH
Confidence             7899999999997644  567888999999999999999999876663               3345556677789999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      +|+++.+++++++.|+.++||+++.++||+++|++......       ........+..+|+++|+.+++++....
T Consensus       155 sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~-------~~~~~~~~~~~~~~~va~~i~~~~~~~~  223 (263)
T PRK09072        155 SKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQ-------ALNRALGNAMDDPEDVAAAVLQAIEKER  223 (263)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcc-------cccccccCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999987543211       0011112246789999999999997653

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-30  Score=222.02  Aligned_cols=228  Identities=22%  Similarity=0.224  Sum_probs=170.5

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +.++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++....+ ..++.++.+|++|.++++++++++
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~-~~~v~~~~~Dl~d~~sv~~~~~~~   87 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVP-DAKLSLRALDLSSLASVAALGEQL   87 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-CCceEEEEecCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999888888777754322 234889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh--------------hcccc--------
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV--------------CGIIG--------  144 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~--------------~~~~~--------  144 (257)
                      .+.++++|+||||||....   +..+.+.++++..+++|+.+++.+.+.+.+.              .+..+        
T Consensus        88 ~~~~~~iD~li~nAG~~~~---~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~  164 (313)
T PRK05854         88 RAEGRPIHLLINNAGVMTP---PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLN  164 (313)
T ss_pred             HHhCCCccEEEECCccccC---CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccccc
Confidence            9999999999999998642   3445678899999999999999987766422              11111        


Q ss_pred             ----CCCCchhhhhHHHHHHHHHHHHHHh--ccCCcEEEeecCCCccChhhHhHhhhh---hccccCccccc---cCCCC
Q 044485          145 ----GAATHAYTSSKHGLLGLMKNTAVEL--GRFGIRVNCVSPYAVSTPLAKDFLKLA---DDGLGGMYSNL---KGAVL  212 (257)
Q Consensus       145 ----~~~~~~y~~sK~a~~~~~~~l~~e~--~~~gi~v~~i~pg~v~t~~~~~~~~~~---~~~~~~~~~~~---~~~~~  212 (257)
                          ......|+.||+|+..|++.|++++  ..+||+||+++||+++|++........   ...........   ...+.
T Consensus       165 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (313)
T PRK05854        165 WERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVG  244 (313)
T ss_pred             ccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccC
Confidence                1334579999999999999999864  467899999999999999864311000   00000000000   01245


Q ss_pred             CHHHHHHHHHHhcCCCCCcccccEEEe
Q 044485          213 EPEDAAEAALYLGSDESKCVSGHNLVV  239 (257)
Q Consensus       213 ~~~~~a~~~~~l~s~~~~~~~G~~~~~  239 (257)
                      ++++.+...++++..... .+|.++.-
T Consensus       245 ~~~~ga~~~l~~a~~~~~-~~g~~~~~  270 (313)
T PRK05854        245 TVESAILPALYAATSPDA-EGGAFYGP  270 (313)
T ss_pred             CHHHHHHHhhheeeCCCC-CCCcEECC
Confidence            889999999888865432 24665543

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-30  Score=217.99  Aligned_cols=229  Identities=21%  Similarity=0.310  Sum_probs=179.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+|++|||||+++||.++++.|+++|++|++++|+.+..++..+++..... ..++.++.+|++|+++++. ++++.+.+
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNL-QQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCC-CCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            468999999999999999999999999999999998877777666543321 2348899999999999999 99998888


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhH
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK  155 (257)
                      +++|++|||||....  ..+.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+....|+++|
T Consensus        80 ~~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  157 (280)
T PRK06914         80 GRIDLLVNNAGYANG--GFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSK  157 (280)
T ss_pred             CCeeEEEECCccccc--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhH
Confidence            999999999997654  567788999999999999999998866642               233445566778899999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh---c---c----ccC---ccccccCCCCCHHHHHHHHH
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD---D---G----LGG---MYSNLKGAVLEPEDAAEAAL  222 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~---~---~----~~~---~~~~~~~~~~~~~~~a~~~~  222 (257)
                      ++++.|+++++.|+.++||+++.++||+++|++.........   .   .    ...   ....+.+++.+|+|+|++++
T Consensus       158 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  237 (280)
T PRK06914        158 YALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIV  237 (280)
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHH
Confidence            999999999999999999999999999999997543211000   0   0    000   00123356789999999999


Q ss_pred             HhcCCCCCcccccEEEecCceeee
Q 044485          223 YLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       223 ~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +++++...   +..+.++++..+.
T Consensus       238 ~~~~~~~~---~~~~~~~~~~~~~  258 (280)
T PRK06914        238 EIAESKRP---KLRYPIGKGVKLM  258 (280)
T ss_pred             HHHcCCCC---CcccccCCchHHH
Confidence            99987642   2467777666554

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.97  E-value=4.9e-30  Score=211.36  Aligned_cols=228  Identities=35%  Similarity=0.583  Sum_probs=181.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh--hHhHHHHhccCCCCCCCceeEecCCCC-HHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL--GESVCKDIGSSSSSASGCSYVHCDVTK-EKDIENAVNT   85 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~   85 (257)
                      ++.+|++|||||++|||+++|+.|+++|+.|+++.|+.+.  .++..+... ..+. ..+....+|+++ .++++.+++.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~Dvs~~~~~v~~~~~~   79 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGG-GRAAAVAADVSDDEESVEALVAA   79 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCC-CcEEEEEecCCCCHHHHHHHHHH
Confidence            4678999999999999999999999999998888887654  444444443 1110 247788899998 9999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH------------HhhhccccCCC-Cchhh
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML------------LGVCGIIGGAA-THAYT  152 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~------------~s~~~~~~~~~-~~~y~  152 (257)
                      +.+.+|++|++|||||..... .++.+.+.++|++++++|+.+++.+.+.+            +|..+. +.+. ...|+
T Consensus        80 ~~~~~g~id~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~~~~Y~  157 (251)
T COG1028          80 AEEEFGRIDILVNNAGIAGPD-APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPGQAAYA  157 (251)
T ss_pred             HHHHcCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCCcchHH
Confidence            999999999999999987531 36888999999999999999999876633            233444 4455 48999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh----hccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA----DDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      +||+|+.+|++.++.|+.++||+++.|+||+++|++........    .....   ..+..+...|++++..+.++.+..
T Consensus       158 ~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  234 (251)
T COG1028         158 ASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAA---RIPLGRLGTPEEVAAAVAFLASDE  234 (251)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHh---cCCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999887543221    00000   003346778999999999998774


Q ss_pred             -CCcccccEEEecCce
Q 044485          229 -SKCVSGHNLVVDGGF  243 (257)
Q Consensus       229 -~~~~~G~~~~~dgG~  243 (257)
                       ..+++|+.+.+|||.
T Consensus       235 ~~~~~~g~~~~~~~~~  250 (251)
T COG1028         235 AASYITGQTLPVDGGL  250 (251)
T ss_pred             hhccccCCEEEeCCCC
Confidence             678999999999885

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.3e-30  Score=216.52  Aligned_cols=210  Identities=26%  Similarity=0.270  Sum_probs=168.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+|++|||||+||||++++++|+++|++|++++|+.+.++++.+...      .++.++.+|++|++++.++++++.+.+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~------~~~~~~~~D~~d~~~~~~~~~~~~~~~   76 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHP------DRALARLLDVTDFDAIDAVVADAEATF   76 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcC------CCeeEEEccCCCHHHHHHHHHHHHHHh
Confidence            36899999999999999999999999999999999877665544321      237789999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhhhhH
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~~sK  155 (257)
                      +++|+||||||....  .++.+.+.+++.+.+++|+.+++.+.+.+               +|..+..+.++...|+++|
T Consensus        77 ~~~d~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK  154 (277)
T PRK06180         77 GPIDVLVNNAGYGHE--GAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSK  154 (277)
T ss_pred             CCCCEEEECCCccCC--cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHH
Confidence            999999999998654  56788899999999999999999987764               2344555667788999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh-------hccccC----ccccccCCCCCHHHHHHHHHHh
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA-------DDGLGG----MYSNLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~-------~~~~~~----~~~~~~~~~~~~~~~a~~~~~l  224 (257)
                      ++++.++++++.|+++.|+++++|+||+++|++........       ......    ....+..++.+|+++|+.++++
T Consensus       155 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~  234 (277)
T PRK06180        155 FALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAA  234 (277)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999998643211000       000000    0011234567999999999999


Q ss_pred             cCCC
Q 044485          225 GSDE  228 (257)
Q Consensus       225 ~s~~  228 (257)
                      +...
T Consensus       235 l~~~  238 (277)
T PRK06180        235 VESD  238 (277)
T ss_pred             HcCC
Confidence            8765

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.97  E-value=3.2e-30  Score=212.26  Aligned_cols=216  Identities=21%  Similarity=0.309  Sum_probs=169.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      ++++||||++|||.+++++|+++|++|++++|+.+.+++..+++.      .++.++.+|++|.++++++++++.+.+++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   74 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG------DNLYIAQLDVRNRAAIEEMLASLPAEWRN   74 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            479999999999999999999999999999999887766655542      23788999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhHHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKHG  157 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK~a  157 (257)
                      +|++|||+|..... .++.+.+.+++++++++|+.+++.+.+.+.               +..+..+.++...|+.+|++
T Consensus        75 id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~  153 (248)
T PRK10538         75 IDVLVNNAGLALGL-EPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAF  153 (248)
T ss_pred             CCEEEECCCccCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHH
Confidence            99999999975321 457788999999999999999998876663               22333455667799999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH-hhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccE
Q 044485          158 LLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF-LKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHN  236 (257)
Q Consensus       158 ~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~  236 (257)
                      +++|++.++.++.++||+++.|.||.+.+++.... .............  ...+.+|+|+|+.++++++....+..++.
T Consensus       154 ~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dvA~~~~~l~~~~~~~~~~~~  231 (248)
T PRK10538        154 VRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQ--NTVALTPEDVSEAVWWVATLPAHVNINTL  231 (248)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhcc--ccCCCCHHHHHHHHHHHhcCCCcccchhh
Confidence            99999999999999999999999999985443221 1111100000111  12356999999999999987766666654


Q ss_pred             E
Q 044485          237 L  237 (257)
Q Consensus       237 ~  237 (257)
                      .
T Consensus       232 ~  232 (248)
T PRK10538        232 E  232 (248)
T ss_pred             c
Confidence            3

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.97  E-value=2.3e-30  Score=220.19  Aligned_cols=226  Identities=20%  Similarity=0.179  Sum_probs=169.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcC-CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           12 GKVALITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      +|+++||||++|||.+++++|+++| ++|++++|+.+..+++.+++...   ..++.++.+|++|.++++++++++.+.+
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP---KDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            6899999999999999999999999 99999999988887777776432   2347889999999999999999998888


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhhccc---------------------------
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGII---------------------------  143 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~~~~---------------------------  143 (257)
                      +++|++|||||+..+. .+..+.+.++|++.+++|+.+++.+.+.+.+.....                           
T Consensus        80 ~~iD~lI~nAG~~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  158 (314)
T TIGR01289        80 RPLDALVCNAAVYFPT-AKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPK  158 (314)
T ss_pred             CCCCEEEECCCccccC-ccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCc
Confidence            9999999999975421 234567889999999999999999877664322100                           


Q ss_pred             -----------------------cCCCCchhhhhHHHHHHHHHHHHHHhc-cCCcEEEeecCCCc-cChhhHhHhhhhhc
Q 044485          144 -----------------------GGAATHAYTSSKHGLLGLMKNTAVELG-RFGIRVNCVSPYAV-STPLAKDFLKLADD  198 (257)
Q Consensus       144 -----------------------~~~~~~~y~~sK~a~~~~~~~l~~e~~-~~gi~v~~i~pg~v-~t~~~~~~~~~~~~  198 (257)
                                             +...+..|++||+|+..+++.|++++. ++||++++|+||++ +|++.+........
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~  238 (314)
T TIGR01289       159 ANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRT  238 (314)
T ss_pred             ccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHH
Confidence                                   011345799999999999999999985 47999999999999 69886532111000


Q ss_pred             cccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecC
Q 044485          199 GLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDG  241 (257)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dg  241 (257)
                      ....+.........+|++.++.+++++.+.....+|.++..++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~  281 (314)
T TIGR01289       239 LFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGN  281 (314)
T ss_pred             HHHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeeecCC
Confidence            0000000111235689999999999887654445677665433

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.1e-30  Score=213.01  Aligned_cols=202  Identities=22%  Similarity=0.293  Sum_probs=161.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcC-CeEEEeeCcchh-hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHG-AKVLIADIKDDL-GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      -++|++|||||++|||+++|++|+++| ++|++++|+.+. ++++.+++...+.  .+++++++|++|+++++++++++.
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGA--SSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCC--CceEEEEecCCChHHHHHHHHHHH
Confidence            367899999999999999999999995 999999999875 7777777755432  248899999999999999999888


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~  152 (257)
                      + ++++|++|||+|...+.  .....+.++..+.+++|+.+++.+.+.+               +|..+..+.+....|+
T Consensus        84 ~-~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~  160 (253)
T PRK07904         84 A-GGDVDVAIVAFGLLGDA--EELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYG  160 (253)
T ss_pred             h-cCCCCEEEEeeecCCch--hhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchH
Confidence            6 58999999999986432  1111245556678999999999876555               2344445556677899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      +||+|+.+|+++++.|+.++||++++|+||+++|++.....           .  .....+|+++|+.++..+.+..
T Consensus       161 ~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~-----------~--~~~~~~~~~~A~~i~~~~~~~~  224 (253)
T PRK07904        161 STKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAK-----------E--APLTVDKEDVAKLAVTAVAKGK  224 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCC-----------C--CCCCCCHHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999998764321           0  1124689999999999987653

>PRK06194 hypothetical protein; Provisional

Probab=99.97  E-value=6.6e-30  Score=214.72  Aligned_cols=216  Identities=24%  Similarity=0.374  Sum_probs=170.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+   .++.++.+|++|.++++++++++.
T Consensus         2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~   78 (287)
T PRK06194          2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQG---AEVLGVRTDVSDAAQVEALADAAL   78 (287)
T ss_pred             cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999887777777665332   347889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------------hhhccccCC
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------------GVCGIIGGA  146 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------------s~~~~~~~~  146 (257)
                      +.++++|+||||||....  .++.+.+.++|+..+++|+.+++.+.+.+.                     |..+..+.+
T Consensus        79 ~~~g~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  156 (287)
T PRK06194         79 ERFGAVHLLFNNAGVGAG--GLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP  156 (287)
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC
Confidence            999999999999998765  667888999999999999999999655543                     223334445


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhcc--CCcEEEeecCCCccChhhHhHhhhhhcccc------Ccc-------ccccCCC
Q 044485          147 ATHAYTSSKHGLLGLMKNTAVELGR--FGIRVNCVSPYAVSTPLAKDFLKLADDGLG------GMY-------SNLKGAV  211 (257)
Q Consensus       147 ~~~~y~~sK~a~~~~~~~l~~e~~~--~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~------~~~-------~~~~~~~  211 (257)
                      ....|+++|++++.|++.++.|+..  .+||++.++||+++|++.............      .+.       .......
T Consensus       157 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T PRK06194        157 AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGK  236 (287)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccC
Confidence            6678999999999999999999874  579999999999999886543211111000      000       0001123


Q ss_pred             CCHHHHHHHHHHhcCCC
Q 044485          212 LEPEDAAEAALYLGSDE  228 (257)
Q Consensus       212 ~~~~~~a~~~~~l~s~~  228 (257)
                      .+++|+|+.++.++.+.
T Consensus       237 ~s~~dva~~i~~~~~~~  253 (287)
T PRK06194        237 VTAEEVAQLVFDAIRAG  253 (287)
T ss_pred             CCHHHHHHHHHHHHHcC
Confidence            69999999999977544

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.4e-29  Score=207.04  Aligned_cols=223  Identities=26%  Similarity=0.346  Sum_probs=178.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|+++|||++++||.++++.|+++|++|++++|+.+.+++..+++....    .++++++|++++++++++++++..
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dl~~~~~~~~~~~~~~~   77 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG----NIHYVVGDVSSTESARNVIEKAAK   77 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CeEEEECCCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999887776655554321    378899999999999999999988


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh-------------hcc-ccCCCCchhhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV-------------CGI-IGGAATHAYTSS  154 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~-------------~~~-~~~~~~~~y~~s  154 (257)
                      .++++|.+|+|+|....  .++.+  .+++..++++|+.+++.+.+.+...             .+. .+.+....|+.+
T Consensus        78 ~~~~id~ii~~ag~~~~--~~~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~s  153 (238)
T PRK05786         78 VLNAIDGLVVTVGGYVE--DTVEE--FSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVA  153 (238)
T ss_pred             HhCCCCEEEEcCCCcCC--CchHH--HHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHH
Confidence            88999999999987543  23333  3889999999999999886666432             121 133455679999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      |++++.+++.++.++.++||+++.|+||+++|++.....      +... ........+++++++.+.+++++....++|
T Consensus       154 K~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~------~~~~-~~~~~~~~~~~~va~~~~~~~~~~~~~~~g  226 (238)
T PRK05786        154 KAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERN------WKKL-RKLGDDMAPPEDFAKVIIWLLTDEADWVDG  226 (238)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhh------hhhh-ccccCCCCCHHHHHHHHHHHhcccccCccC
Confidence            999999999999999999999999999999998643210      0000 011123678999999999999988888999


Q ss_pred             cEEEecCceeee
Q 044485          235 HNLVVDGGFAIV  246 (257)
Q Consensus       235 ~~~~~dgG~~~~  246 (257)
                      +.+.+|||..|+
T Consensus       227 ~~~~~~~~~~~~  238 (238)
T PRK05786        227 VVIPVDGGARLK  238 (238)
T ss_pred             CEEEECCccccC
Confidence            999999998763

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-30  Score=220.16  Aligned_cols=228  Identities=23%  Similarity=0.254  Sum_probs=170.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||.++|++|+++|++|++++|+.+..++..+++....+ ..++.++.+|++|.++++++++++.
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATP-GADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHH
Confidence            578899999999999999999999999999999999998877776666643221 2347889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------hhccc---------
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------VCGII---------  143 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------~~~~~---------  143 (257)
                      +.++++|+||||||....    ....+.++++..+++|+.+++.+.+.++.               ..+..         
T Consensus        91 ~~~~~iD~li~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~  166 (306)
T PRK06197         91 AAYPRIDLLINNAGVMYT----PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDL  166 (306)
T ss_pred             hhCCCCCEEEECCccccC----CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCcccc
Confidence            999999999999997643    23456678899999999999987666532               11111         


Q ss_pred             ----cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEee--cCCCccChhhHhHhhhhhccccCccccccCCCCCHHHH
Q 044485          144 ----GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCV--SPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDA  217 (257)
Q Consensus       144 ----~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i--~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (257)
                          +......|+.||+|++.|++.++++++++|++++++  +||+++|++.+............. . + ....++++-
T Consensus       167 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~-~-~-~~~~~~~~g  243 (306)
T PRK06197        167 QWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVL-A-P-LLAQSPEMG  243 (306)
T ss_pred             CcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHH-H-h-hhcCCHHHH
Confidence                122345799999999999999999999889877655  799999998764322111000000 0 1 113467777


Q ss_pred             HHHHHHhcCCCCCcccccEEEecCcee
Q 044485          218 AEAALYLGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       218 a~~~~~l~s~~~~~~~G~~~~~dgG~~  244 (257)
                      +...++++.+ ....+|..+..||+..
T Consensus       244 ~~~~~~~~~~-~~~~~g~~~~~~~~~~  269 (306)
T PRK06197        244 ALPTLRAATD-PAVRGGQYYGPDGFGE  269 (306)
T ss_pred             HHHHHHHhcC-CCcCCCeEEccCcccc
Confidence            7777776654 3446888888777653

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-29  Score=210.85  Aligned_cols=215  Identities=21%  Similarity=0.270  Sum_probs=169.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++..|+++||||+++||++++++|+++|++|++++|+.+.+++..+++...+   .++.++.+|++++++++++++++.+
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADG---GEAVAFPLDVTDPDSVKSFVAQAEE   83 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4667899999999999999999999999999999998877766666554332   2478899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .++++|++|||||....  .++.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+....|+.
T Consensus        84 ~~~~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  161 (274)
T PRK07775         84 ALGEIEVLVSGAGDTYF--GKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGA  161 (274)
T ss_pred             hcCCCCEEEECCCcCCC--cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHH
Confidence            88999999999997654  567788899999999999999998866653               2334444556678999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh-hh---ccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL-AD---DGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      +|++++.+++++++++.++||++++|+||+++|++....... ..   ............++..++|+|++++++++..
T Consensus       162 sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        162 AKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETP  240 (274)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCC
Confidence            999999999999999999999999999999998854321100 00   0000000111245789999999999999764

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-29  Score=209.61  Aligned_cols=204  Identities=30%  Similarity=0.401  Sum_probs=167.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH-cC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ-YG   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~-~~   91 (257)
                      |++|||||++|||++++++|+++|++|++++|+.+.++++.+++.     +.++.++++|+++.+++.++++++.+. ++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   76 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG-----AGNAWTGALDVTDRAAWDAALADFAAATGG   76 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999999999999999999988877776654     124889999999999999999988776 78


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK~  156 (257)
                      ++|+||||||....  ..+.+.+.+++++++++|+.+++.+.+.+.               |..+..+.+....|+.||+
T Consensus        77 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  154 (260)
T PRK08267         77 RLDVLFNNAGILRG--GPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKF  154 (260)
T ss_pred             CCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHH
Confidence            99999999998754  667888999999999999999999876653               3344556677789999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCC
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      +++.|+++++.++.++||++++|+||+++|++......   ........ ......+|+++++.++.++..
T Consensus       155 a~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~---~~~~~~~~-~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        155 AVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSN---EVDAGSTK-RLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccc---hhhhhhHh-hccCCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999988653100   00000001 112346899999999999854

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.5e-30  Score=213.40  Aligned_cols=205  Identities=23%  Similarity=0.353  Sum_probs=166.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ++++++||||+||||++++++|+++|++|++++|+.+..+..           .++.++++|++|+++++++++++.+.+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~D~~d~~~~~~~~~~~~~~~   71 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI-----------PGVELLELDVTDDASVQAAVDEVIARA   71 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc-----------CCCeeEEeecCCHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999999999987544211           137889999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhH
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK  155 (257)
                      +++|+||||||....  .++.+.+.+++.+.+++|+.+++.+.+.+.               |..+..+.+....|+++|
T Consensus        72 g~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  149 (270)
T PRK06179         72 GRIDVLVNNAGVGLA--GAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASK  149 (270)
T ss_pred             CCCCEEEECCCCCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHH
Confidence            999999999998754  667788999999999999999999877653               334445566677899999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc---------ccCccccccCCCCCHHHHHHHHHHhcC
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG---------LGGMYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ++++.|++.++.|++++||++++|+||+++|++...........         .......+..+..+|+++|+.++++++
T Consensus       150 ~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~  229 (270)
T PRK06179        150 HAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAAL  229 (270)
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHc
Confidence            99999999999999999999999999999999765432110000         000011223456789999999999987


Q ss_pred             CC
Q 044485          227 DE  228 (257)
Q Consensus       227 ~~  228 (257)
                      ..
T Consensus       230 ~~  231 (270)
T PRK06179        230 GP  231 (270)
T ss_pred             CC
Confidence            65

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.6e-29  Score=206.73  Aligned_cols=201  Identities=19%  Similarity=0.238  Sum_probs=167.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.... ++.++.++++|+++++++.++++++.+.++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARY-PGIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC-CCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999999888877766664432 123488999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCC-CchhhhhH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAA-THAYTSSK  155 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~-~~~y~~sK  155 (257)
                      ++|++|||||+...  ..+.+.+.+.+.+.+++|+.+++.+.+.+.               |..+..+.+. ...|+.||
T Consensus        81 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK  158 (248)
T PRK08251         81 GLDRVIVNAGIGKG--ARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASK  158 (248)
T ss_pred             CCCEEEECCCcCCC--CCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHH
Confidence            99999999998754  567778889999999999999998876653               2334444443 57899999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      ++++.+++.++.++...||+++.|+||+++|++.+....             .....++++.++.++..+...
T Consensus       159 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------------~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        159 AGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-------------TPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-------------CCccCCHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999998654211             123578999999999887654

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.97  E-value=4.3e-30  Score=196.18  Aligned_cols=172  Identities=23%  Similarity=0.287  Sum_probs=152.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.|.++|||||++|||.++|++|.+.|-.||+++|+++.++++.++...       ++...||+.|.++++++++.+++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~-------~~t~v~Dv~d~~~~~~lvewLkk   74 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE-------IHTEVCDVADRDSRRELVEWLKK   74 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcc-------hheeeecccchhhHHHHHHHHHh
Confidence            56789999999999999999999999999999999999999998887753       78899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .|+.+|+||||||+.......-.+...++...-+.+|+.+|+++...++               |-.+..|....+.||+
T Consensus        75 ~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYca  154 (245)
T COG3967          75 EYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCA  154 (245)
T ss_pred             hCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchh
Confidence            9999999999999987632222355567778889999999999987773               4456667777889999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccCh
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTP  187 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~  187 (257)
                      +|+|+.+|+.+|+.++...+|.|.-+.|-.|+|+
T Consensus       155 TKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         155 TKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             hHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            9999999999999999999999999999999996

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.3e-29  Score=208.82  Aligned_cols=211  Identities=28%  Similarity=0.440  Sum_probs=171.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      ++++|||||+++||.++++.|+++|++|++++|+.+..++..+++...+   .++.++.+|++|++++..+++++.+.++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   77 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHG---GEALVVPTDVSDAEACERLIEAAVARFG   77 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3789999999999999999999999999999999887777777665443   2488899999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCC-CHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhhhhHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~~sK~  156 (257)
                      ++|++|||+|....  ..+.+. +.+++.+.+++|+.+++.+.+.+.              +..+..+.+....|+.+|+
T Consensus        78 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  155 (263)
T PRK06181         78 GIDILVNNAGITMW--SRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKH  155 (263)
T ss_pred             CCCEEEECCCcccc--cchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHH
Confidence            99999999997654  556777 899999999999999999866552              2334445666789999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      +++.+++.++.++.++||+++++.||++.|++.+........... .......++++|+|+|+.++++++..
T Consensus       156 ~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        156 ALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLG-KSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             HHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccc-cccccccCCCCHHHHHHHHHHHhhCC
Confidence            999999999999999999999999999999987643221111110 00111136789999999999999764

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.97  E-value=3.3e-29  Score=204.67  Aligned_cols=222  Identities=31%  Similarity=0.517  Sum_probs=179.4

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      +||||++++||.+++++|+++|++|++++|+. +.+++..+.+...+   .++.++.+|++|+++++++++++.+.++++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYG---VKALGVVCDVSDREDVKAVVEEIEEELGPI   77 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999875 44445555554332   347899999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhHHHH
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKHGL  158 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK~a~  158 (257)
                      |++|||+|....  .++.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+....|+++|+++
T Consensus        78 d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~  155 (239)
T TIGR01830        78 DILVNNAGITRD--NLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGV  155 (239)
T ss_pred             CEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHH
Confidence            999999998654  456778889999999999999998866542               333455667788999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEE
Q 044485          159 LGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLV  238 (257)
Q Consensus       159 ~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~  238 (257)
                      +.+++.++.++...|++++.++||+++|++...........+  ....+..++.+++|+++.+++++.+.....+|+.++
T Consensus       156 ~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~  233 (239)
T TIGR01830       156 IGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKI--LSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIH  233 (239)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHH--HhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEE
Confidence            999999999999999999999999999986543221111000  112334567899999999999998777789999999


Q ss_pred             ecCce
Q 044485          239 VDGGF  243 (257)
Q Consensus       239 ~dgG~  243 (257)
                      +|+|.
T Consensus       234 ~~~g~  238 (239)
T TIGR01830       234 VDGGM  238 (239)
T ss_pred             eCCCc
Confidence            99986

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-29  Score=210.42  Aligned_cols=205  Identities=24%  Similarity=0.303  Sum_probs=163.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+    .     .+.++.+|+++.++++++++++.+.+++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~-----~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   72 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA----A-----GFTAVQLDVNDGAALARLAEELEAEHGG   72 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----C-----CCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            799999999999999999999999999999999876554432    1     1678899999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhhhhHHHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYTSSKHGL  158 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~~sK~a~  158 (257)
                      +|++|||||....  .++.+.+.+++++.+++|+.+++.+.+.+.              |..+..+.+....|+++|+++
T Consensus        73 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al  150 (274)
T PRK05693         73 LDVLINNAGYGAM--GPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAV  150 (274)
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHH
Confidence            9999999997654  567888999999999999999999877663              234444556677899999999


Q ss_pred             HHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccC---c---c-------ccccCCCCCHHHHHHHHHHhc
Q 044485          159 LGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGG---M---Y-------SNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       159 ~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~---~---~-------~~~~~~~~~~~~~a~~~~~l~  225 (257)
                      +.|+++++.|++++||+++.|+||+++|++.+............   .   .       ........+|+++|+.++..+
T Consensus       151 ~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~  230 (274)
T PRK05693        151 HALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAV  230 (274)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999765422111110000   0   0       000123468999999999887


Q ss_pred             CCC
Q 044485          226 SDE  228 (257)
Q Consensus       226 s~~  228 (257)
                      ...
T Consensus       231 ~~~  233 (274)
T PRK05693        231 QQS  233 (274)
T ss_pred             hCC
Confidence            643

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-29  Score=199.48  Aligned_cols=184  Identities=23%  Similarity=0.241  Sum_probs=152.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      +++||||++|||++++++|+++ ++|++++|+..                    .+++|++|++++++++++    ++++
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------------~~~~D~~~~~~~~~~~~~----~~~i   56 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------------DVQVDITDPASIRALFEK----VGKV   56 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------------ceEecCCChHHHHHHHHh----cCCC
Confidence            7999999999999999999999 99999998742                    257999999999998765    4789


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchhhhhHHHHHH
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYTSSKHGLLG  160 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y~~sK~a~~~  160 (257)
                      |+||||||....  .++.+.+.++|.+.+++|+.+++.+.+.+.             +..+..+.+....|+++|+|+++
T Consensus        57 d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  134 (199)
T PRK07578         57 DAVVSAAGKVHF--APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEG  134 (199)
T ss_pred             CEEEECCCCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHH
Confidence            999999997643  667888999999999999999999876653             33455566778899999999999


Q ss_pred             HHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEe
Q 044485          161 LMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVV  239 (257)
Q Consensus       161 ~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~  239 (257)
                      |++.++.|+ ++||+++.|+||+++|++.....         ..  +.....+|+|+|+.+.++++.   ..+|+++.+
T Consensus       135 ~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~~---------~~--~~~~~~~~~~~a~~~~~~~~~---~~~g~~~~~  198 (199)
T PRK07578        135 FVKAAALEL-PRGIRINVVSPTVLTESLEKYGP---------FF--PGFEPVPAARVALAYVRSVEG---AQTGEVYKV  198 (199)
T ss_pred             HHHHHHHHc-cCCeEEEEEcCCcccCchhhhhh---------cC--CCCCCCCHHHHHHHHHHHhcc---ceeeEEecc
Confidence            999999999 88999999999999998742110         00  112367899999999999874   378888765

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.97  E-value=7.2e-29  Score=211.83  Aligned_cols=227  Identities=21%  Similarity=0.217  Sum_probs=168.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ..+.+|+++||||++|||.+++++|+++|++|++++|+.+..++..+++...   ..++.++.+|++|.++++++++++.
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~   78 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP---PDSYTIIHIDLGDLDSVRRFVDDFR   78 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc---CCceEEEEecCCCHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999988888777776432   2347889999999999999999988


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh-----------------ccc-------
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC-----------------GII-------  143 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~-----------------~~~-------  143 (257)
                      +.++++|+||||||+.... ....+.+.++++..+++|+.+++.+.+.+....                 ...       
T Consensus        79 ~~~~~iD~li~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~  157 (322)
T PRK07453         79 ALGKPLDALVCNAAVYMPL-LKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKI  157 (322)
T ss_pred             HhCCCccEEEECCcccCCC-CCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCcc
Confidence            7778899999999976431 233467889999999999999999876664211                 000       


Q ss_pred             ----------------------------cCCCCchhhhhHHHHHHHHHHHHHHhc-cCCcEEEeecCCCc-cChhhHhHh
Q 044485          144 ----------------------------GGAATHAYTSSKHGLLGLMKNTAVELG-RFGIRVNCVSPYAV-STPLAKDFL  193 (257)
Q Consensus       144 ----------------------------~~~~~~~y~~sK~a~~~~~~~l~~e~~-~~gi~v~~i~pg~v-~t~~~~~~~  193 (257)
                                                  +..+...|+.||.+.+.+++.+++++. .+||++++++||+| .|++.+...
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~  237 (322)
T PRK07453        158 PIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTP  237 (322)
T ss_pred             CCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCC
Confidence                                        011235799999999999999999995 47999999999999 587754321


Q ss_pred             hhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEE
Q 044485          194 KLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLV  238 (257)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~  238 (257)
                      .........+.........++++.++.+++++.+.....+|..+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        238 PLFQKLFPWFQKNITGGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             HHHHHHHHHHHHHHhhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence            110000000001111234578888888888876654445777665

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-28  Score=202.58  Aligned_cols=198  Identities=22%  Similarity=0.254  Sum_probs=164.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |+++||||++|||.+++++|+++|++|++++|+.+..++..+++....+  .++.++++|++|+++++++++++.+   .
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~---~   76 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGA--VAVSTHELDILDTASHAAFLDSLPA---L   76 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcC--CeEEEEecCCCChHHHHHHHHHHhh---c
Confidence            7899999999999999999999999999999998877777666643322  3488999999999999999988764   4


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhHHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKHG  157 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK~a  157 (257)
                      +|++|||+|....  ..+.+.+.+++.+.+++|+.+++++.+.+.               |..+..+.+....|+++|++
T Consensus        77 ~d~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  154 (243)
T PRK07102         77 PDIVLIAVGTLGD--QAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAA  154 (243)
T ss_pred             CCEEEECCcCCCC--cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHH
Confidence            7999999997654  567788899999999999999999876653               33344455667789999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          158 LLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       158 ~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      ++++++.++.|+.++||++++|+||+++|++.....            .+.....+|+++++.++.+++++.
T Consensus       155 ~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~i~~~~~~~~  214 (243)
T PRK07102        155 LTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK------------LPGPLTAQPEEVAKDIFRAIEKGK  214 (243)
T ss_pred             HHHHHHHHHHHhhccCcEEEEEecCcccChhhhccC------------CCccccCCHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999999998754321            112236789999999999998754

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.7e-28  Score=199.24  Aligned_cols=211  Identities=28%  Similarity=0.410  Sum_probs=172.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+.+++++||||+|+||.+++++|+++|++|++++|+++.+++..+++...    .+++++.+|+++++++..+++++.+
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~D~~~~~~~~~~~~~~~~   78 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK----GNVLGLAADVRDEADVQRAVDAIVA   78 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc----CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            356799999999999999999999999999999999988877777766432    2488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh--------------hhccccCCCCchhhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG--------------VCGIIGGAATHAYTSS  154 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s--------------~~~~~~~~~~~~y~~s  154 (257)
                      .++++|+||||+|....  .++.+.+.+++.+.+++|+.+++.+.+.+..              ..+..+......|+.+
T Consensus        79 ~~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~s  156 (237)
T PRK07326         79 AFGGLDVLIANAGVGHF--APVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNAS  156 (237)
T ss_pred             HcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHH
Confidence            99999999999997654  5677889999999999999999987665532              2233344556789999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      |+++.++++.++.|+++.|++++.|+||++.|++.......           ......+++|+++.++++++.....+.+
T Consensus       157 k~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~-----------~~~~~~~~~d~a~~~~~~l~~~~~~~~~  225 (237)
T PRK07326        157 KFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSE-----------KDAWKIQPEDIAQLVLDLLKMPPRTLPS  225 (237)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccch-----------hhhccCCHHHHHHHHHHHHhCCcccccc
Confidence            99999999999999999999999999999999764332110           0012468999999999999887665555


Q ss_pred             cE
Q 044485          235 HN  236 (257)
Q Consensus       235 ~~  236 (257)
                      +.
T Consensus       226 ~~  227 (237)
T PRK07326        226 KI  227 (237)
T ss_pred             ce
Confidence            53

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=4e-29  Score=209.69  Aligned_cols=220  Identities=26%  Similarity=0.301  Sum_probs=172.4

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ..++.+++++|||+++|||.++|+.|+.+|++|++++|+.+..++..+.+.. .....++.++++|++|.++|.++++++
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~-~~~~~~i~~~~lDLssl~SV~~fa~~~  108 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQK-GKANQKIRVIQLDLSSLKSVRKFAEEF  108 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh-cCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            4578899999999999999999999999999999999999988999888876 223345889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhhcccc----------------------
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIG----------------------  144 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~~~~~----------------------  144 (257)
                      .+.++++|++|||||+....   . ..+.|.++..+.+|+.|++.+++.+++..-..+                      
T Consensus       109 ~~~~~~ldvLInNAGV~~~~---~-~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~  184 (314)
T KOG1208|consen  109 KKKEGPLDVLINNAGVMAPP---F-SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLS  184 (314)
T ss_pred             HhcCCCccEEEeCcccccCC---c-ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhcc
Confidence            99999999999999998652   2 677789999999999999999887753322111                      


Q ss_pred             ------CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccCh-hhHhHhhhhhccccCccccccCCCCCHHHH
Q 044485          145 ------GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTP-LAKDFLKLADDGLGGMYSNLKGAVLEPEDA  217 (257)
Q Consensus       145 ------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (257)
                            ......|+.||.++..+++.|++.+.+ ||.+++++||.+.|+ ..+ ..........   ......+-++++-
T Consensus       185 ~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r-~~~~~~~l~~---~l~~~~~ks~~~g  259 (314)
T KOG1208|consen  185 GEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR-VNLLLRLLAK---KLSWPLTKSPEQG  259 (314)
T ss_pred             chhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec-chHHHHHHHH---HHHHHhccCHHHH
Confidence                  111124999999999999999999988 999999999999998 444 1111110000   0111123489999


Q ss_pred             HHHHHHhcCCC-CCcccccE
Q 044485          218 AEAALYLGSDE-SKCVSGHN  236 (257)
Q Consensus       218 a~~~~~l~s~~-~~~~~G~~  236 (257)
                      |+..++++-+. -..++|..
T Consensus       260 a~t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  260 AATTCYAALSPELEGVSGKY  279 (314)
T ss_pred             hhheehhccCccccCccccc
Confidence            99999988654 33455554

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.5e-28  Score=201.55  Aligned_cols=222  Identities=20%  Similarity=0.269  Sum_probs=172.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      .|++|||||+|+||++++++|+++|++|++++|+.+.+++..++..      .++.++.+|++|.++++++++++.+.++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYG------DRLWVLQLDVTDSAAVRAVVDRAFAALG   75 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc------CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3789999999999999999999999999999999877666655432      2378899999999999999999999889


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK~  156 (257)
                      ++|+||||||....  .+..+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+....|+.||+
T Consensus        76 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  153 (276)
T PRK06482         76 RIDVVVSNAGYGLF--GAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKW  153 (276)
T ss_pred             CCCEEEECCCCCCC--cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHH
Confidence            99999999998754  567788899999999999999999877652               3333445567789999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh-ccccC-----cc----ccccCCCCCHHHHHHHHHHhcC
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD-DGLGG-----MY----SNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-~~~~~-----~~----~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      +++.|++.+++++.++||+++.++||.+.|++......... .....     +.    .....-..+|++++++++..+.
T Consensus       154 a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~  233 (276)
T PRK06482        154 GIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASAD  233 (276)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHc
Confidence            99999999999999999999999999998887543211000 00000     00    1111224689999999998875


Q ss_pred             CCCCcccccEEEecCcee
Q 044485          227 DESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~  244 (257)
                      ...   .+..+++.+|..
T Consensus       234 ~~~---~~~~~~~g~~~~  248 (276)
T PRK06482        234 QTP---APRRLTLGSDAY  248 (276)
T ss_pred             CCC---CCeEEecChHHH
Confidence            432   345567666643

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.7e-28  Score=199.86  Aligned_cols=192  Identities=20%  Similarity=0.232  Sum_probs=156.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      ++++||||++|||++++++|+++|++|++++|+.+.+++..+..       .++.++++|++|+++++++++++..   .
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~---~   71 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQS-------ANIFTLAFDVTDHPGTKAALSQLPF---I   71 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-------CCCeEEEeeCCCHHHHHHHHHhccc---C
Confidence            78999999999999999999999999999999987666554432       2378899999999999999887642   4


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchhhhhHHHHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYTSSKHGLL  159 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y~~sK~a~~  159 (257)
                      +|.+|||||....  ....+.+.+++++.+++|+.+++++.+.+.             |..+..+.+....|+++|++++
T Consensus        72 ~d~~i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~  149 (240)
T PRK06101         72 PELWIFNAGDCEY--MDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVA  149 (240)
T ss_pred             CCEEEEcCccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHH
Confidence            8999999986532  334567899999999999999999876663             3344556677788999999999


Q ss_pred             HHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          160 GLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       160 ~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      +|++.++.|+.++||++++++||+++|++.....          ..  .....+|+++++.+...+...
T Consensus       150 ~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~----------~~--~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        150 YFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT----------FA--MPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC----------CC--CCcccCHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999998754311          00  112468999999998877654

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.96  E-value=2.7e-28  Score=189.28  Aligned_cols=208  Identities=26%  Similarity=0.289  Sum_probs=163.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc-CCeEEE-eeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH-
Q 044485           13 KVALITGGARGIGECTARLFSKH-GAKVLI-ADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ-   89 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~-g~~Vi~-~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~-   89 (257)
                      |.++||||.+|||..++++|.+. |..+++ +.|+.+..   .+++........+++.+++|+++-++++.+++++.+. 
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            67999999999999999999875 666544 55556653   2222221112245999999999999999999999987 


Q ss_pred             -cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh--------------------------cc
Q 044485           90 -YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC--------------------------GI  142 (257)
Q Consensus        90 -~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~--------------------------~~  142 (257)
                       ..++|+||||||+.... ....+.+.+.|.+.+++|+.+++++.+.+.++.                          +-
T Consensus        81 g~~GlnlLinNaGi~~~y-~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s  159 (249)
T KOG1611|consen   81 GSDGLNLLINNAGIALSY-NTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS  159 (249)
T ss_pred             ccCCceEEEeccceeeec-ccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc
Confidence             45899999999997653 456677889999999999999999988884321                          11


Q ss_pred             c---cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHH
Q 044485          143 I---GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAE  219 (257)
Q Consensus       143 ~---~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  219 (257)
                      +   ......+|.+||+|+.+|+|+++.|+++.+|.|.++|||||.|+|....                 ...++||.+.
T Consensus       160 ~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~-----------------a~ltveeSts  222 (249)
T KOG1611|consen  160 IGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK-----------------AALTVEESTS  222 (249)
T ss_pred             cCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC-----------------cccchhhhHH
Confidence            1   1233568999999999999999999999999999999999999997632                 3567888888


Q ss_pred             HHHHhcCCCCCcccccEEEecC
Q 044485          220 AALYLGSDESKCVSGHNLVVDG  241 (257)
Q Consensus       220 ~~~~l~s~~~~~~~G~~~~~dg  241 (257)
                      .++.........=+|..++-|+
T Consensus       223 ~l~~~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  223 KLLASINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             HHHHHHHhcCcccCcceEccCC
Confidence            8777776665556788877765

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.5e-28  Score=227.00  Aligned_cols=204  Identities=25%  Similarity=0.339  Sum_probs=168.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+   .++.++.+|++|.++++++++++.+
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~  444 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKG---GTAHAYTCDLTDSAAVDHTVKDILA  444 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988888877765432   2488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCC--CHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDN--DQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      .++++|++|||||....  ..+.+.  ..+++++.+++|+.+++.+.+.+.               |..+..+.+....|
T Consensus       445 ~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  522 (657)
T PRK07201        445 EHGHVDYLVNNAGRSIR--RSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAY  522 (657)
T ss_pred             hcCCCCEEEECCCCCCC--CChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchH
Confidence            99999999999997543  223222  368899999999999999866652               33444456677889


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      +++|+++++|+++++.|+.++||++++|+||+++|++......     .    .  .....+|+++|+.++..+.+.
T Consensus       523 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~-----~----~--~~~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        523 VASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR-----Y----N--NVPTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc-----c----c--CCCCCCHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999998643210     0    0  123578999999999877554

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.7e-28  Score=197.14  Aligned_cols=206  Identities=21%  Similarity=0.280  Sum_probs=157.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH-HHHHc-
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT-AVTQY-   90 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~-~~~~~-   90 (257)
                      +++|||||++|||++++++|+++|++|++++|+.+..  ..+   ..   ..++.++++|+++.+++++++++ +.+.+ 
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~~~---~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   73 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--LAA---AA---GERLAEVELDLSDAAAAAAWLAGDLLAAFV   73 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--hhh---cc---CCeEEEEEeccCCHHHHHHHHHHHHHHHhc
Confidence            4799999999999999999999999999999986531  111   11   13488899999999999998877 55544 


Q ss_pred             --CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           91 --GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        91 --~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                        +++|++|||+|..... .++.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+++..|++
T Consensus        74 ~~~~~~~~v~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  152 (243)
T PRK07023         74 DGASRVLLINNAGTVEPI-GPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCA  152 (243)
T ss_pred             cCCCceEEEEcCcccCCC-CccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHH
Confidence              3799999999976532 457778999999999999999998765552               3444456677889999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccc---cCcc-ccccCCCCCHHHHHH-HHHHhcCCC
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGL---GGMY-SNLKGAVLEPEDAAE-AALYLGSDE  228 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~a~-~~~~l~s~~  228 (257)
                      +|++++++++.++.+ .+.||+++.|+||+++|++.........+..   ..+. ..+.++...|+++|+ .+.+|.++.
T Consensus       153 sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        153 TKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             HHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccc
Confidence            999999999999999 7889999999999999998654321111100   0011 233467889999999 566777665

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7e-28  Score=195.53  Aligned_cols=202  Identities=21%  Similarity=0.264  Sum_probs=156.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |+++|||+++|||++++++|+++|++|++++|+.+..++.. +.       .++.++.+|++|+++++++++++.+  ++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~-------~~~~~~~~D~~d~~~~~~~~~~~~~--~~   71 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-AL-------PGVHIEKLDMNDPASLDQLLQRLQG--QR   71 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hc-------cccceEEcCCCCHHHHHHHHHHhhc--CC
Confidence            78999999999999999999999999999999987654432 22       1267889999999999999988754  47


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh--------------hcccc---CCCCchhhhhH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV--------------CGIIG---GAATHAYTSSK  155 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~--------------~~~~~---~~~~~~y~~sK  155 (257)
                      +|+||||||.......++.+.+.+++.+.+++|+.+++.+.+.+...              .+..+   ......|+++|
T Consensus        72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK  151 (225)
T PRK08177         72 FDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASK  151 (225)
T ss_pred             CCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHH
Confidence            99999999987543356778899999999999999999887666321              12211   22456799999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccccc
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGH  235 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~  235 (257)
                      ++++.|++.++.|+.++||+++.|+||+++|++....                 ...++++.++.++.++.....-..+.
T Consensus       152 ~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (225)
T PRK08177        152 AALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN-----------------APLDVETSVKGLVEQIEAASGKGGHR  214 (225)
T ss_pred             HHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC-----------------CCCCHHHHHHHHHHHHHhCCccCCCc
Confidence            9999999999999999999999999999999985321                 12467777777777765543222333


Q ss_pred             EEEecC
Q 044485          236 NLVVDG  241 (257)
Q Consensus       236 ~~~~dg  241 (257)
                      .+..+|
T Consensus       215 ~~~~~~  220 (225)
T PRK08177        215 FIDYQG  220 (225)
T ss_pred             eeCcCC
Confidence            343443

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=6.1e-28  Score=196.08  Aligned_cols=209  Identities=22%  Similarity=0.228  Sum_probs=179.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +.++|||+|+|||.++|++...+|++|.++.|+.+++++++.+++-..+-. +|.+..+|+.|.+++..+++++++..++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~-~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVE-DVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccc-eeeEeccccccHHHHHHHHhhhhhccCC
Confidence            689999999999999999999999999999999999999999887654332 2779999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------------HhhhccccCCCCchhhhhHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------------LGVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------------~s~~~~~~~~~~~~y~~sK~  156 (257)
                      ||.+|||||...+  ..+.+.+.++++..+++|+.+++++.+..                +|..+..+..+..+|+++|+
T Consensus       113 ~d~l~~cAG~~v~--g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~  190 (331)
T KOG1210|consen  113 IDNLFCCAGVAVP--GLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKF  190 (331)
T ss_pred             cceEEEecCcccc--cccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHH
Confidence            9999999998876  88999999999999999999999986655                46677788899999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcC
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      |+.+++..+++|..++||+|....|+.++||.+.+-....++...-.- . ......+|++|.+++.-+-
T Consensus       191 alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~-g-~ss~~~~e~~a~~~~~~~~  258 (331)
T KOG1210|consen  191 ALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIE-G-GSSVIKCEEMAKAIVKGMK  258 (331)
T ss_pred             HHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeec-C-CCCCcCHHHHHHHHHhHHh
Confidence            999999999999999999999999999999988655444333322221 1 1234689999999886543

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=2e-28  Score=188.02  Aligned_cols=171  Identities=26%  Similarity=0.342  Sum_probs=151.2

Q ss_pred             CCcEEEEecCC-CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH-
Q 044485           11 QGKVALITGGA-RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT-   88 (257)
Q Consensus        11 ~~k~~lItGas-~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~-   88 (257)
                      ..|.+||||++ ||||.+++++|+++|+.|+.++|+.+.-..+....        .+..+++|+++++++..+..+++. 
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~--------gl~~~kLDV~~~~~V~~v~~evr~~   77 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF--------GLKPYKLDVSKPEEVVTVSGEVRAN   77 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh--------CCeeEEeccCChHHHHHHHHHHhhC
Confidence            45899999987 99999999999999999999999987655554333        278899999999999999999998 


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH--------------HhhhccccCCCCchhhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML--------------LGVCGIIGGAATHAYTSS  154 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~--------------~s~~~~~~~~~~~~y~~s  154 (257)
                      .+|++|+|+||||..-.  .|..+.+.++.++.+++|+.|.+.+.+.+              .|+.+..|.+....|.+|
T Consensus        78 ~~Gkld~L~NNAG~~C~--~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAs  155 (289)
T KOG1209|consen   78 PDGKLDLLYNNAGQSCT--FPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSAS  155 (289)
T ss_pred             CCCceEEEEcCCCCCcc--cccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHH
Confidence            78999999999997643  78889999999999999999999887766              367778888889999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD  191 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~  191 (257)
                      |+|+.++++.|+.|++++||+|..+.||.+.|+....
T Consensus       156 KAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  156 KAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             HHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence            9999999999999999999999999999999976543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.96  E-value=2.5e-28  Score=198.69  Aligned_cols=198  Identities=25%  Similarity=0.314  Sum_probs=169.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      -|++++|||||.|||++.|++||++|.+|++.+|++++++.+.+|+.+..+  .+++++.+|+++.+.+   .+.+++..
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~--vev~~i~~Dft~~~~~---ye~i~~~l  122 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK--VEVRIIAIDFTKGDEV---YEKLLEKL  122 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC--cEEEEEEEecCCCchh---HHHHHHHh
Confidence            358999999999999999999999999999999999999999999988765  5699999999998873   33333322


Q ss_pred             --CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhhh
Q 044485           91 --GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYTS  153 (257)
Q Consensus        91 --~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~~  153 (257)
                        .+|.+||||+|...+.+.++.+.+...+++.+.+|..+...+++.+               .|..+..|.|.+..|++
T Consensus       123 ~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysa  202 (312)
T KOG1014|consen  123 AGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSA  202 (312)
T ss_pred             cCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHH
Confidence              2688999999998866688999999899999999999999998877               46778888999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcC
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      +|+.++.|+++|..||..+||.|.++.|..|.|.|.....             +.-...+|+..|...+.-.-
T Consensus       203 sK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~-------------~sl~~ps~~tfaksal~tiG  262 (312)
T KOG1014|consen  203 SKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK-------------PSLFVPSPETFAKSALNTIG  262 (312)
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCC-------------CCCcCcCHHHHHHHHHhhcC
Confidence            9999999999999999999999999999999999865321             12234578888888776554

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.95  E-value=1.3e-27  Score=195.93  Aligned_cols=190  Identities=31%  Similarity=0.430  Sum_probs=149.2

Q ss_pred             HHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCC
Q 044485           28 TARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVK  107 (257)
Q Consensus        28 ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~  107 (257)
                      +|++|+++|++|++++|+.+..+     .         ..++++|++|.++++++++++.   +++|+||||||....  
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~---------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~--   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L---------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT--   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h---------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC--
Confidence            47899999999999999876531     1         2457899999999999988764   689999999997521  


Q ss_pred             CCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh-------------hcc---------------------------ccCCC
Q 044485          108 PNILDNDQAEFERILSINLVGAFLGRNMLLGV-------------CGI---------------------------IGGAA  147 (257)
Q Consensus       108 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~-------------~~~---------------------------~~~~~  147 (257)
                              +.+++.+++|+.+++.+.+.+...             .+.                           .+.+.
T Consensus        62 --------~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (241)
T PRK12428         62 --------APVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVAL  133 (241)
T ss_pred             --------CCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCc
Confidence                    247899999999999987776421             121                           13445


Q ss_pred             CchhhhhHHHHHHHHHHHH-HHhccCCcEEEeecCCCccChhhHhHhhhhh-ccccCccccccCCCCCHHHHHHHHHHhc
Q 044485          148 THAYTSSKHGLLGLMKNTA-VELGRFGIRVNCVSPYAVSTPLAKDFLKLAD-DGLGGMYSNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~-~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~l~  225 (257)
                      ...|++||+|+++|++.++ .|++++|||||+|+||+++|++.+....... ..... ...+.+++.+|+|+|+.++||+
T Consensus       134 ~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~~~~~~~pe~va~~~~~l~  212 (241)
T PRK12428        134 ATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDS-DAKRMGRPATADEQAAVLVFLC  212 (241)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhh-cccccCCCCCHHHHHHHHHHHc
Confidence            6789999999999999999 9999999999999999999998654321111 11111 1234567889999999999999


Q ss_pred             CCCCCcccccEEEecCceee
Q 044485          226 SDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       226 s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ++...+++|+.+.+|||...
T Consensus       213 s~~~~~~~G~~i~vdgg~~~  232 (241)
T PRK12428        213 SDAARWINGVNLPVDGGLAA  232 (241)
T ss_pred             ChhhcCccCcEEEecCchHH
Confidence            98888999999999999753

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.95  E-value=6.9e-27  Score=190.35  Aligned_cols=177  Identities=25%  Similarity=0.318  Sum_probs=156.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+..+|.|+|||+.+|+|+.+|++|.++|+.|.+.+.+++..+.+..+..     ..+...++.|++++++++++.+.++
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~-----s~rl~t~~LDVT~~esi~~a~~~V~   99 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK-----SPRLRTLQLDVTKPESVKEAAQWVK   99 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc-----CCcceeEeeccCCHHHHHHHHHHHH
Confidence            36788999999999999999999999999999999988887777766664     1347888999999999999998888


Q ss_pred             HHcC--CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH--------------HhhhccccCCCCchh
Q 044485           88 TQYG--KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML--------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~~--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~--------------~s~~~~~~~~~~~~y  151 (257)
                      +..+  ++-.||||||+.... .+.+-.+.+++.+++++|+.|++.+++.+              +|..|..+.|...+|
T Consensus       100 ~~l~~~gLwglVNNAGi~~~~-g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~g~Y  178 (322)
T KOG1610|consen  100 KHLGEDGLWGLVNNAGISGFL-GPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPALGPY  178 (322)
T ss_pred             HhcccccceeEEecccccccc-CccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCcccccc
Confidence            7653  599999999987543 56777889999999999999999998887              467788888899999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK  190 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~  190 (257)
                      ++||+|++.|+.+|++|+.+.||.|.+|.||.+.|+...
T Consensus       179 ~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  179 CVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             hhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            999999999999999999999999999999999998773

>PRK08264 short chain dehydrogenase; Validated

Probab=99.95  E-value=1.8e-26  Score=188.71  Aligned_cols=192  Identities=24%  Similarity=0.307  Sum_probs=157.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +++.+++++||||+|+||++++++|+++|+ +|++++|+.+.+++       .   +.++.++.+|++|+++++++++. 
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~---~~~~~~~~~D~~~~~~~~~~~~~-   70 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------L---GPRVVPLQLDVTDPASVAAAAEA-   70 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------c---CCceEEEEecCCCHHHHHHHHHh-
Confidence            457889999999999999999999999999 89999998765543       1   12488999999999999887764 


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                         ++++|++||++|.... ..++.+.+.+++.+.+++|+.+++.+.+.+.               |..+..+.+....|
T Consensus        71 ---~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y  146 (238)
T PRK08264         71 ---ASDVTILVNNAGIFRT-GSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTY  146 (238)
T ss_pred             ---cCCCCEEEECCCcCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHh
Confidence               4679999999998432 2567888999999999999999999876542               33444555667789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      +.+|++++.+++.++.++.++||+++.++||.++|++....               .....+++++++.++..+....
T Consensus       147 ~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~---------------~~~~~~~~~~a~~~~~~~~~~~  209 (238)
T PRK08264        147 SASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGL---------------DAPKASPADVARQILDALEAGD  209 (238)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccC---------------CcCCCCHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999874321               0125688999999998876543

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.95  E-value=4.4e-27  Score=182.00  Aligned_cols=152  Identities=31%  Similarity=0.607  Sum_probs=137.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCc--chhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGA-KVLIADIK--DDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~--~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      |++|||||++|||++++++|+++|+ .|++++|+  .+..+++.++++..+   .++.++++|++++++++++++++.+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG---AKITFIECDLSDPESIRALIEEVIKR   77 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT---SEEEEEESETTSHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc---cccccccccccccccccccccccccc
Confidence            7899999999999999999999966 58999998  677777777776433   45899999999999999999999999


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhccccCCCCchhhhhHHHH
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGIIGGAATHAYTSSKHGL  158 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~~~~~~~~~y~~sK~a~  158 (257)
                      ++++|++|||+|....  .++.+.+.+++++++++|+.+++.+.+.+.           |..+..|.+....|+++|+|+
T Consensus        78 ~~~ld~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~askaal  155 (167)
T PF00106_consen   78 FGPLDILINNAGIFSD--GSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPGMSAYSASKAAL  155 (167)
T ss_dssp             HSSESEEEEECSCTTS--BSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTTBHHHHHHHHHH
T ss_pred             cccccccccccccccc--cccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCCChhHHHHHHHH
Confidence            9999999999999874  788899999999999999999999988774           467888889999999999999


Q ss_pred             HHHHHHHHHHh
Q 044485          159 LGLMKNTAVEL  169 (257)
Q Consensus       159 ~~~~~~l~~e~  169 (257)
                      ++|++++++|+
T Consensus       156 ~~~~~~la~e~  166 (167)
T PF00106_consen  156 RGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhc
Confidence            99999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08017 oxidoreductase; Provisional

Probab=99.95  E-value=2.2e-26  Score=190.10  Aligned_cols=207  Identities=24%  Similarity=0.249  Sum_probs=161.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc-C
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY-G   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-~   91 (257)
                      |++|||||+|+||.++++.|+++|++|++++|+.+.++...+    .     .+..+.+|++|.++++.+++++.+.. +
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~----~-----~~~~~~~D~~~~~~~~~~~~~i~~~~~~   73 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS----L-----GFTGILLDLDDPESVERAADEVIALTDN   73 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh----C-----CCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            789999999999999999999999999999999876654422    1     26788999999999999999887754 6


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK~  156 (257)
                      ++|.+|||+|....  .++.+.+.+++++.+++|+.+++.+.+.+.               +..+..+.+....|+.+|+
T Consensus        74 ~~~~ii~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~  151 (256)
T PRK08017         74 RLYGLFNNAGFGVY--GPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKY  151 (256)
T ss_pred             CCeEEEECCCCCCc--cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHH
Confidence            89999999997543  567788999999999999999988755442               3334455566778999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +++.++++++.++.++|++++.+.||.+.|++......................+.+|+|+++.+..++++...
T Consensus       152 ~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~  225 (256)
T PRK08017        152 ALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKP  225 (256)
T ss_pred             HHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999987654322110000000000012357999999999999977653

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.95  E-value=8.1e-26  Score=186.79  Aligned_cols=205  Identities=21%  Similarity=0.282  Sum_probs=157.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||++|||++++++|+++|++|++++|+.+..++..+......   .++.++.+|++|++++.++++      +
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~------~   72 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRG---LALRVEKLDLTDAIDRAQAAE------W   72 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcceEEEeeCCCHHHHHHHhc------C
Confidence            4799999999999999999999999999999999877666655544332   237889999999998877653      3


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK~  156 (257)
                      ++|+||||||....  .++.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+....|+++|+
T Consensus        73 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~  150 (257)
T PRK09291         73 DVDVLLNNAGIGEA--GAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKH  150 (257)
T ss_pred             CCCEEEECCCcCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHH
Confidence            79999999998754  678889999999999999999998765442               3334445566778999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccc---cCcc----ccccCCCCCHHHHHHHHHHhcCC
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGL---GGMY----SNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      +++.+++.++.++.+.||++++|+||++.|++............   ....    ........+++++++.+..++..
T Consensus       151 a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        151 ALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             HHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999987543222111100   0000    01112246899998888877654

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.95  E-value=7.1e-26  Score=183.40  Aligned_cols=200  Identities=20%  Similarity=0.262  Sum_probs=159.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |+++|||++++||++++++|+++|++|++++|+.+..+++..    .     .+.++.+|+++.++++++++++..  ++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~-----~~~~~~~D~~~~~~v~~~~~~~~~--~~   70 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----L-----GAEALALDVADPASVAGLAWKLDG--EA   70 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----c-----cceEEEecCCCHHHHHHHHHHhcC--CC
Confidence            689999999999999999999999999999998766554432    1     156789999999999998876642  47


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh--------------hccccCCCC---chhhhhH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV--------------CGIIGGAAT---HAYTSSK  155 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~--------------~~~~~~~~~---~~y~~sK  155 (257)
                      +|++|||+|.......++.+.+.+++++.+++|+.+++.+.+.+.+.              .+..+....   ..|+.+|
T Consensus        71 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK  150 (222)
T PRK06953         71 LDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASK  150 (222)
T ss_pred             CCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhH
Confidence            99999999987433345667799999999999999999987666431              222222222   2599999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccccc
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGH  235 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~  235 (257)
                      ++++.+++.++.++  .+++++.|+||+++|++.+.                 .....+++.++.++.++.......+|.
T Consensus       151 ~a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (222)
T PRK06953        151 AALNDALRAASLQA--RHATCIALHPGWVRTDMGGA-----------------QAALDPAQSVAGMRRVIAQATRRDNGR  211 (222)
T ss_pred             HHHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCC-----------------CCCCCHHHHHHHHHHHHHhcCcccCce
Confidence            99999999999886  47999999999999997542                 124578999999998877766778999


Q ss_pred             EEEecCc
Q 044485          236 NLVVDGG  242 (257)
Q Consensus       236 ~~~~dgG  242 (257)
                      .+..|++
T Consensus       212 ~~~~~~~  218 (222)
T PRK06953        212 FFQYDGV  218 (222)
T ss_pred             EEeeCCc
Confidence            9988876

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.94  E-value=5.5e-26  Score=186.53  Aligned_cols=184  Identities=20%  Similarity=0.195  Sum_probs=139.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|+++||||++|||++++++|+++|++|++++|+.....+  ... . .   . ...+.+|++|.+++++      
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~--~~~-~-~---~-~~~~~~D~~~~~~~~~------   75 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE--SND-E-S---P-NEWIKWECGKEESLDK------   75 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh--hhc-c-C---C-CeEEEeeCCCHHHHHH------
Confidence            35788999999999999999999999999999999998632111  111 1 1   1 3568899999987764      


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhhc-----------------cccCCCCch
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCG-----------------IIGGAATHA  150 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~~-----------------~~~~~~~~~  150 (257)
                       .++++|++|||||...     ..+.+.+++++.+++|+.+++++.+.+....-                 ....+....
T Consensus        76 -~~~~iDilVnnAG~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~~~~~  149 (245)
T PRK12367         76 -QLASLDVLILNHGINP-----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPALSPS  149 (245)
T ss_pred             -hcCCCCEEEECCccCC-----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCCCCch
Confidence             3468999999999742     23467899999999999999999776644321                 011123457


Q ss_pred             hhhhHHHHHHHH---HHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCC
Q 044485          151 YTSSKHGLLGLM---KNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       151 y~~sK~a~~~~~---~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      |++||+|+..+.   +.++.|+.+.|++++.++||+++|++..                  ....+|+++|+.+++.+..
T Consensus       150 Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~------------------~~~~~~~~vA~~i~~~~~~  211 (245)
T PRK12367        150 YEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP------------------IGIMSADFVAKQILDQANL  211 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc------------------cCCCCHHHHHHHHHHHHhc
Confidence            999999986544   5555566789999999999999998621                  1256899999999999976


Q ss_pred             CC
Q 044485          228 ES  229 (257)
Q Consensus       228 ~~  229 (257)
                      ..
T Consensus       212 ~~  213 (245)
T PRK12367        212 GL  213 (245)
T ss_pred             CC
Confidence            53

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.2e-24  Score=176.36  Aligned_cols=205  Identities=24%  Similarity=0.321  Sum_probs=160.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      .|++|||||+++||+++++.|+++ ++|++++|+.+..++..++..       .+.++.+|++|+++++++++++    +
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~----~   70 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELP-------GATPFPVDLTDPEAIAAAVEQL----G   70 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhc-------cceEEecCCCCHHHHHHHHHhc----C
Confidence            379999999999999999999999 999999999876655544331       2778999999999998877653    4


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH--------------HhhhccccCCCCchhhhhHHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML--------------LGVCGIIGGAATHAYTSSKHG  157 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~--------------~s~~~~~~~~~~~~y~~sK~a  157 (257)
                      ++|+|||++|....  .++.+.+.+++.+.+++|+.+++.+.+.+              ++..+..+.++...|+.+|++
T Consensus        71 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~~K~a  148 (227)
T PRK08219         71 RLDVLVHNAGVADL--GPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFA  148 (227)
T ss_pred             CCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCCCchHHHHHHH
Confidence            79999999998654  56778889999999999999988775554              234445556677899999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEE
Q 044485          158 LLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNL  237 (257)
Q Consensus       158 ~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~  237 (257)
                      ++.+++.++.++... |+++.|+||.+++++..........      ..+..++++++|+++.++++++...   .|.++
T Consensus       149 ~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~~~------~~~~~~~~~~~dva~~~~~~l~~~~---~~~~~  218 (227)
T PRK08219        149 LRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQEGG------EYDPERYLRPETVAKAVRFAVDAPP---DAHIT  218 (227)
T ss_pred             HHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhhcc------ccCCCCCCCHHHHHHHHHHHHcCCC---CCccc
Confidence            999999999988776 9999999999999875543221111      1123457899999999999997653   45555


Q ss_pred             Eec
Q 044485          238 VVD  240 (257)
Q Consensus       238 ~~d  240 (257)
                      +++
T Consensus       219 ~~~  221 (227)
T PRK08219        219 EVV  221 (227)
T ss_pred             eEE
Confidence            544

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=1.9e-25  Score=173.51  Aligned_cols=221  Identities=21%  Similarity=0.186  Sum_probs=168.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeE--EEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKV--LIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~V--i~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .++++|+||+|.|||..++..+.+++-..  +...|....++..    ....+  ........|++....+.++++..++
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L----~v~~g--d~~v~~~g~~~e~~~l~al~e~~r~   78 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGL----KVAYG--DDFVHVVGDITEEQLLGALREAPRK   78 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccce----EEEec--CCcceechHHHHHHHHHHHHhhhhh
Confidence            46889999999999999999998888664  4444433322221    11221  1234566788888888899999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCC-CCCCHHHHHHHHhhhchhhhHHHHHH----------------HhhhccccCCCCchh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNI-LDNDQAEFERILSINLVGAFLGRNML----------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~----------------~s~~~~~~~~~~~~y  151 (257)
                      .++..|++|||||...+....+ +..+.++|.+.|+.|+++.+.+...+                +|.+...|...|..|
T Consensus        79 k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~y  158 (253)
T KOG1204|consen   79 KGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAY  158 (253)
T ss_pred             cCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHh
Confidence            9999999999999887653332 46788999999999999999986655                456677788888999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh---hccccCcc-ccccCCCCCHHHHHHHHHHhcCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA---DDGLGGMY-SNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      |++|+|.++|.+.|+.|-. +++++.++.||.+||+|.....+..   +.....+. ....+++.+|+..++.+..|+..
T Consensus       159 c~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~  237 (253)
T KOG1204|consen  159 CSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEK  237 (253)
T ss_pred             hhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHh
Confidence            9999999999999999866 7999999999999999987665432   22222221 23346788999999999999876


Q ss_pred             CCCcccccEEEe
Q 044485          228 ESKCVSGHNLVV  239 (257)
Q Consensus       228 ~~~~~~G~~~~~  239 (257)
                      .. +++|+.+..
T Consensus       238 ~~-f~sG~~vdy  248 (253)
T KOG1204|consen  238 GD-FVSGQHVDY  248 (253)
T ss_pred             cC-ccccccccc
Confidence            54 789998754

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.91  E-value=8.8e-23  Score=207.06  Aligned_cols=172  Identities=17%  Similarity=0.188  Sum_probs=145.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcch------------------------------------------
Q 044485           11 QGKVALITGGARGIGECTARLFSKH-GAKVLIADIKDD------------------------------------------   47 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~------------------------------------------   47 (257)
                      +++++|||||++|||.++|++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5799999999999999999999998 699999999820                                          


Q ss_pred             -----hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHH
Q 044485           48 -----LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL  122 (257)
Q Consensus        48 -----~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~  122 (257)
                           ..++..+++...   +.++.++.||++|.++++++++++.+. ++||+||||||+...  ..+.+.+.++|.+.+
T Consensus      2076 ~~~~~ei~~~la~l~~~---G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~--~~i~~~t~e~f~~v~ 2149 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAA---GASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLAD--KHIQDKTLEEFNAVY 2149 (2582)
T ss_pred             cchhHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCC--CCcccCCHHHHHHHH
Confidence                 011112222222   235889999999999999999999877 689999999998765  678899999999999


Q ss_pred             hhhchhhhHHHHHH-----------HhhhccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH
Q 044485          123 SINLVGAFLGRNML-----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK  190 (257)
Q Consensus       123 ~~n~~~~~~l~~~~-----------~s~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~  190 (257)
                      ++|+.|++.+.+.+           +|..+..+.+++..|+++|++++.+++.++.++.  +++|++|+||+++|+|..
T Consensus      2150 ~~nv~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2150 GTKVDGLLSLLAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence            99999999886555           5677788888899999999999999999999874  499999999999998864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.91  E-value=7e-23  Score=177.94  Aligned_cols=183  Identities=18%  Similarity=0.178  Sum_probs=139.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.   ..   ..+..+.+|++|++++.+.+     
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~---~~---~~v~~v~~Dvsd~~~v~~~l-----  243 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEING---ED---LPVKTLHWQVGQEAALAELL-----  243 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cC---CCeEEEEeeCCCHHHHHHHh-----
Confidence            56899999999999999999999999999999999987655432221   11   12678899999998876543     


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhhc-----------------cccCCCCchh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCG-----------------IIGGAATHAY  151 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~~-----------------~~~~~~~~~y  151 (257)
                        +++|++|||||...     ..+.+.+++++.+++|+.+++.+.+.+.+.+.                 ....+....|
T Consensus       244 --~~IDiLInnAGi~~-----~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~~~~~~~~Y  316 (406)
T PRK07424        244 --EKVDILIINHGINV-----HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEVNPAFSPLY  316 (406)
T ss_pred             --CCCCEEEECCCcCC-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccccCCCchHH
Confidence              57999999999743     23678899999999999999999877754321                 1111234579


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      ++||+|+..|++ ++++.  .++.+..+.||++.|++..                  ....+||++|+.++++++++..
T Consensus       317 ~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~------------------~~~~spe~vA~~il~~i~~~~~  374 (406)
T PRK07424        317 ELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP------------------IGVMSADWVAKQILKLAKRDFR  374 (406)
T ss_pred             HHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc------------------CCCCCHHHHHHHHHHHHHCCCC
Confidence            999999999985 44443  4677778889999887521                  1246899999999999977654

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.89  E-value=8.5e-22  Score=153.04  Aligned_cols=164  Identities=20%  Similarity=0.320  Sum_probs=134.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHH---HHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVC---KDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~---~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      |+++||||+++||.+++++|+++|+ .|++++|+.+..+...   ++++..   +.++.++.+|++++++++++++++..
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL---GAEVTVVACDVADRAALAAALAAIPA   77 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999997 5888888765443322   333222   23478899999999999999999988


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------HhhhccccCCCCchhhhhHHH
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------LGVCGIIGGAATHAYTSSKHG  157 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------~s~~~~~~~~~~~~y~~sK~a  157 (257)
                      .++++|.+|||+|....  .++.+.+.+++++.+++|+.+++.+.+.+           ++..+..+.+....|+++|++
T Consensus        78 ~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~  155 (180)
T smart00822       78 RLGPLRGVIHAAGVLDD--GLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQANYAAANAF  155 (180)
T ss_pred             HcCCeeEEEEccccCCc--cccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCchhhHHHHHH
Confidence            88999999999997654  56778889999999999999999987766           344555667778899999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEeecCCCcc
Q 044485          158 LLGLMKNTAVELGRFGIRVNCVSPYAVS  185 (257)
Q Consensus       158 ~~~~~~~l~~e~~~~gi~v~~i~pg~v~  185 (257)
                      ++.+++.++    ..|+++..+.||++.
T Consensus       156 ~~~~~~~~~----~~~~~~~~~~~g~~~  179 (180)
T smart00822      156 LDALAAHRR----ARGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHH----hcCCceEEEeecccc
Confidence            999997765    358999999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.88  E-value=4.1e-21  Score=164.09  Aligned_cols=207  Identities=15%  Similarity=0.120  Sum_probs=145.2

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcC--CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHG--AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++|++|||||+|+||++++++|+++|  ++|++.+|+.....++.+++..     .++.++.+|++|++++.++++   
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~-----~~~~~v~~Dl~d~~~l~~~~~---   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPA-----PCLRFFIGDVRDKERLTRALR---   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCC-----CcEEEEEccCCCHHHHHHHHh---
Confidence            357999999999999999999999987  6899999886654444433321     237889999999999888765   


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh--------hccccCCCCchhhhhHHHHH
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV--------CGIIGGAATHAYTSSKHGLL  159 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~--------~~~~~~~~~~~y~~sK~a~~  159 (257)
                          .+|+|||+||....   +..+.+   ....+++|+.++.++...+...        ++..+..+...|+++|++.+
T Consensus        74 ----~iD~Vih~Ag~~~~---~~~~~~---~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~p~~~Y~~sK~~~E  143 (324)
T TIGR03589        74 ----GVDYVVHAAALKQV---PAAEYN---PFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAANPINLYGATKLASD  143 (324)
T ss_pred             ----cCCEEEECcccCCC---chhhcC---HHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCHHHHHHHHHH
Confidence                59999999996431   222223   3468999999999987766321        11122334567999999999


Q ss_pred             HHHHHHHHHhccCCcEEEeecCCCccChhhH---hHhhhhhccc--cCcc-ccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          160 GLMKNTAVELGRFGIRVNCVSPYAVSTPLAK---DFLKLADDGL--GGMY-SNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       160 ~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~---~~~~~~~~~~--~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      .+++.++.+.++.|+++++++||.+.++...   .+........  -... ....+.++.++|++++++.++...   ..
T Consensus       144 ~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~---~~  220 (324)
T TIGR03589       144 KLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM---LG  220 (324)
T ss_pred             HHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC---CC
Confidence            9999998888889999999999999875321   1111000000  0000 112234789999999999887642   24


Q ss_pred             ccEE
Q 044485          234 GHNL  237 (257)
Q Consensus       234 G~~~  237 (257)
                      |+.+
T Consensus       221 ~~~~  224 (324)
T TIGR03589       221 GEIF  224 (324)
T ss_pred             CCEE
Confidence            5655

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.86  E-value=1.9e-20  Score=166.85  Aligned_cols=216  Identities=15%  Similarity=0.138  Sum_probs=151.0

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccC-----CC-CCCCceeEecCCCCHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSS-----SS-SASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-----~~-~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      ..||++|||||+|+||++++++|+++|++|++++|+.+.++++.+++...     +. ...++.++.+|++|.+++.+. 
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a-  156 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA-  156 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH-
Confidence            46899999999999999999999999999999999998877766554321     10 112478999999999887653 


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhcc-ccCCCCchh
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGI-IGGAATHAY  151 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~-~~~~~~~~y  151 (257)
                            ++++|+||||+|....   .     ..++...+++|+.+..++.+.+.           +..+. .+.+ ...|
T Consensus       157 ------LggiDiVVn~AG~~~~---~-----v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p-~~~~  221 (576)
T PLN03209        157 ------LGNASVVICCIGASEK---E-----VFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFP-AAIL  221 (576)
T ss_pred             ------hcCCCEEEEccccccc---c-----ccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCcc-ccch
Confidence                  3579999999986431   1     12356778899999888876552           11111 1111 1123


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      . +|.++..+.+.+..++...||+++.|+||++++++.... . ...........+.++.++.+|+|+.++|++++... 
T Consensus       222 ~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-~-t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~a-  297 (576)
T PLN03209        222 N-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-E-THNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRL-  297 (576)
T ss_pred             h-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-c-ccceeeccccccCCCccCHHHHHHHHHHHHcCchh-
Confidence            3 788888888999999999999999999999988754311 0 00000000123456778999999999999985421 


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      -.+.++.+-++-..
T Consensus       298 s~~kvvevi~~~~~  311 (576)
T PLN03209        298 SYCKVVEVIAETTA  311 (576)
T ss_pred             ccceEEEEEeCCCC
Confidence            35677777666533

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.86  E-value=3.6e-21  Score=150.89  Aligned_cols=163  Identities=24%  Similarity=0.434  Sum_probs=126.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcch---hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           14 VALITGGARGIGECTARLFSKHGA-KVLIADIKDD---LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ++||||+.+|||..++++|+++|+ +|++++|+..   ..++..++++..+   .++.++.||++|+++++++++++.+.
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g---~~v~~~~~Dv~d~~~v~~~~~~~~~~   78 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAG---ARVEYVQCDVTDPEAVAAALAQLRQR   78 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT----EEEEEE--TTSHHHHHHHHHTSHTT
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCC---CceeeeccCccCHHHHHHHHHHHHhc
Confidence            799999999999999999999985 5999999932   3345566665543   45999999999999999999999999


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------HhhhccccCCCCchhhhhHHHH
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------LGVCGIIGGAATHAYTSSKHGL  158 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------~s~~~~~~~~~~~~y~~sK~a~  158 (257)
                      +++|+.|||+||....  .++.+.+.+++...+...+.+..++.+.+           +|+.+..+.++...|+++.+.+
T Consensus        79 ~~~i~gVih~ag~~~~--~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq~~YaaAN~~l  156 (181)
T PF08659_consen   79 FGPIDGVIHAAGVLAD--APIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQSAYAAANAFL  156 (181)
T ss_dssp             SS-EEEEEE---------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTBHHHHHHHHHH
T ss_pred             cCCcceeeeeeeeecc--cccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcchHhHHHHHHHH
Confidence            9999999999998765  78999999999999999999999997766           6888899999999999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEeecCCCcc
Q 044485          159 LGLMKNTAVELGRFGIRVNCVSPYAVS  185 (257)
Q Consensus       159 ~~~~~~l~~e~~~~gi~v~~i~pg~v~  185 (257)
                      +.|++..+.    .|.++.+|..|..+
T Consensus       157 da~a~~~~~----~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  157 DALARQRRS----RGLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHH----TTSEEEEEEE-EBS
T ss_pred             HHHHHHHHh----CCCCEEEEEccccC
Confidence            999887654    47778888877543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.86  E-value=2.9e-20  Score=160.47  Aligned_cols=218  Identities=13%  Similarity=0.045  Sum_probs=151.0

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ++||++|||||+|+||.+++++|+++|++|++++|+.....+....+..    ..++.++.+|++|.+++.+++++.   
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~---   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL----AKKIEDHFGDIRDAAKLRKAIAEF---   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh----cCCceEEEccCCCHHHHHHHHhhc---
Confidence            4579999999999999999999999999999999987654443332321    123677899999999999888754   


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhccc-------------cC
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGII-------------GG  145 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~~-------------~~  145 (257)
                        ++|+|||+|+...      ...+.+++...+++|+.++..+...+.           |.....             +.
T Consensus        75 --~~d~vih~A~~~~------~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~  146 (349)
T TIGR02622        75 --KPEIVFHLAAQPL------VRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPL  146 (349)
T ss_pred             --CCCEEEECCcccc------cccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCC
Confidence              5999999999532      133445677888999999998865541           111111             11


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhcc----CCcEEEeecCCCccChhhH---h----HhhhhhccccCcc--ccccCCCC
Q 044485          146 AATHAYTSSKHGLLGLMKNTAVELGR----FGIRVNCVSPYAVSTPLAK---D----FLKLADDGLGGMY--SNLKGAVL  212 (257)
Q Consensus       146 ~~~~~y~~sK~a~~~~~~~l~~e~~~----~gi~v~~i~pg~v~t~~~~---~----~~~~~~~~~~~~~--~~~~~~~~  212 (257)
                      .+...|+.+|.+.+.+++.++.++.+    +|+++++++|+.+.+|...   .    +............  ......++
T Consensus       147 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i  226 (349)
T TIGR02622       147 GGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQ  226 (349)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCccccee
Confidence            23457999999999999999988755    5999999999999876421   1    0010100000001  22334578


Q ss_pred             CHHHHHHHHHHhcCCCCC--cccccEEEecCc
Q 044485          213 EPEDAAEAALYLGSDESK--CVSGHNLVVDGG  242 (257)
Q Consensus       213 ~~~~~a~~~~~l~s~~~~--~~~G~~~~~dgG  242 (257)
                      ..+|++++++.++.....  ...|+.+++.+|
T Consensus       227 ~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       227 HVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             eHHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            899999999877653211  123578898764

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.83  E-value=3.9e-19  Score=151.06  Aligned_cols=174  Identities=15%  Similarity=0.096  Sum_probs=119.3

Q ss_pred             cCCcEEEEecCCCchHHH--HHHHHHHcCCeEEEeeCcchhh------------HhHHHHhccCCCCCCCceeEecCCCC
Q 044485           10 LQGKVALITGGARGIGEC--TARLFSKHGAKVLIADIKDDLG------------ESVCKDIGSSSSSASGCSYVHCDVTK   75 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~--ia~~l~~~g~~Vi~~~r~~~~~------------~~~~~~~~~~~~~~~~v~~~~~D~~~   75 (257)
                      -.+|++||||+++|||.+  +|+.| ++|++|+++++..+..            +.+.+++...+   .++..+.||+++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G---~~a~~i~~DVss  114 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAG---LYAKSINGDAFS  114 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcC---CceEEEEcCCCC
Confidence            346999999999999999  89999 9999988888543221            12333443322   236789999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCCCCCCCC---------------CCCC-----------------CCCHHHHHHHHh
Q 044485           76 EKDIENAVNTAVTQYGKLDIMFNNAGTVDEVK---------------PNIL-----------------DNDQAEFERILS  123 (257)
Q Consensus        76 ~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~---------------~~~~-----------------~~~~~~~~~~~~  123 (257)
                      +++++++++++.+.+|+||+||||+|......               .++.                 ..+.+++...  
T Consensus       115 ~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~T--  192 (398)
T PRK13656        115 DEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADT--  192 (398)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHH--
Confidence            99999999999999999999999999763211               0011                 2333343332  


Q ss_pred             hhchhhhH---HHHHHH---------hhh--cccc-CCCCc-----hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCC
Q 044485          124 INLVGAFL---GRNMLL---------GVC--GIIG-GAATH-----AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYA  183 (257)
Q Consensus       124 ~n~~~~~~---l~~~~~---------s~~--~~~~-~~~~~-----~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~  183 (257)
                      ++++|.-.   ..+.+.         ++.  ..++ ...++     .-+.+|++|++-+|.|+.++++.|||+|++.+|.
T Consensus       193 v~vMggedw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~  272 (398)
T PRK13656        193 VKVMGGEDWELWIDALDEAGVLAEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKA  272 (398)
T ss_pred             HHhhccchHHHHHHHHHhcccccCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCc
Confidence            33333311   111110         111  1111 11123     4478999999999999999999999999999999


Q ss_pred             ccChhh
Q 044485          184 VSTPLA  189 (257)
Q Consensus       184 v~t~~~  189 (257)
                      +.|.-.
T Consensus       273 ~~T~As  278 (398)
T PRK13656        273 VVTQAS  278 (398)
T ss_pred             ccchhh
Confidence            999643

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.83  E-value=8.8e-19  Score=149.77  Aligned_cols=212  Identities=15%  Similarity=0.148  Sum_probs=144.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ++|++|||||+|+||++++++|+++|++|+++.|+....++........ +...++.++.+|++|+++++++++      
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALD-GAKERLKLFKADLLDEGSFELAID------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhcc-CCCCceEEEeCCCCCchHHHHHHc------
Confidence            3699999999999999999999999999999988876554443222111 111347889999999999888775      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH------------hhhccccCC------------
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL------------GVCGIIGGA------------  146 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~------------s~~~~~~~~------------  146 (257)
                       ++|+||||||....      ..+.+.+...+++|+.+++++.+.+.            |..+..+..            
T Consensus        77 -~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~  149 (325)
T PLN02989         77 -GCETVFHTASPVAI------TVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDET  149 (325)
T ss_pred             -CCCEEEEeCCCCCC------CCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcC
Confidence             58999999996421      22334567889999999998865541            222211110            


Q ss_pred             ----------CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHh----hhhhccc-c-CccccccCC
Q 044485          147 ----------ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFL----KLADDGL-G-GMYSNLKGA  210 (257)
Q Consensus       147 ----------~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~~-~-~~~~~~~~~  210 (257)
                                ....|+.+|.+.+.+++.+++++   |+.++.++|+.+.+|......    ....... . .......+.
T Consensus       150 ~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~  226 (325)
T PLN02989        150 FFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHR  226 (325)
T ss_pred             CCCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcC
Confidence                      01369999999999998887653   899999999999887643210    0000000 0 011111245


Q ss_pred             CCCHHHHHHHHHHhcCCCCCcccccEEEecCc
Q 044485          211 VLEPEDAAEAALYLGSDESKCVSGHNLVVDGG  242 (257)
Q Consensus       211 ~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG  242 (257)
                      ++.++|+|++++.++....  . +..++++|+
T Consensus       227 ~i~v~Dva~a~~~~l~~~~--~-~~~~ni~~~  255 (325)
T PLN02989        227 FVDVRDVALAHVKALETPS--A-NGRYIIDGP  255 (325)
T ss_pred             eeEHHHHHHHHHHHhcCcc--c-CceEEEecC
Confidence            7889999999998876532  2 346788554

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.82  E-value=8.6e-20  Score=144.04  Aligned_cols=213  Identities=21%  Similarity=0.229  Sum_probs=160.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC-----eEEEeeCcchhhHhHHHHhccCCC-CCCCceeEecCCCCHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGA-----KVLIADIKDDLGESVCKDIGSSSS-SASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~-----~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      .|++||||+++|||.+|+.+|.+..-     ++++++|+.++.++.+..+.+..+ ...++.++.+|+++..|+.++.++
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            48999999999999999999998753     478899999999999988877544 345688999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCC------------C-------------CCCCCHHHHHHHHhhhchhhhHHHHHHHhhh
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKP------------N-------------ILDNDQAEFERILSINLVGAFLGRNMLLGVC  140 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~------------~-------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~  140 (257)
                      +.++|.++|.+..|||++...+-            +             .-..+.+++..+++.|+.|++.+.+.+.+..
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            99999999999999998653211            0             1123567888899999999999977774332


Q ss_pred             ccccC------------------------CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh
Q 044485          141 GIIGG------------------------AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA  196 (257)
Q Consensus       141 ~~~~~------------------------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~  196 (257)
                      .....                        .+..+|..||-+++-+.-++-+.+.+.|+-.+.++||..-|.++.......
T Consensus       163 ~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~~~  242 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLNPF  242 (341)
T ss_pred             hcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhhhH
Confidence            22111                        223379999999999999999999999999999999999888766543321


Q ss_pred             -------hccccCccccccCCCCCHHHHHHHHHHhc
Q 044485          197 -------DDGLGGMYSNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       197 -------~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  225 (257)
                             .-........|+. .++|-..|.+.+|+.
T Consensus       243 ~~~~~~~~fyl~rllgspwh-~id~y~aa~A~vw~~  277 (341)
T KOG1478|consen  243 TYFGMLCGFYLARLLGSPWH-NIDPYKAANAPVWVT  277 (341)
T ss_pred             HHHHHHHHHHHHHHhcCccc-ccCccccccchhhhh
Confidence                   1111122234432 245666666666655

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.82  E-value=1.8e-18  Score=148.87  Aligned_cols=224  Identities=16%  Similarity=0.060  Sum_probs=144.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhh-HhHHHHhcc-CCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG-ESVCKDIGS-SSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~-~~~~~~~~~-~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      .++++|++|||||+|+||.+++++|+++|++|++++|+.+.. ....+.+.. ......++.++.+|++|.+++.++++.
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            367889999999999999999999999999999998875431 111122211 111123478999999999999998876


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccC-----
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGG-----  145 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~-----  145 (257)
                      .     .+|+|||||+....      ....++....+++|+.++..+...+.               |....++.     
T Consensus        82 ~-----~~d~Vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~  150 (340)
T PLN02653         82 I-----KPDEVYNLAAQSHV------AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQ  150 (340)
T ss_pred             c-----CCCEEEECCcccch------hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCC
Confidence            4     59999999997532      11223456777889988888755432               11212221     


Q ss_pred             ------CCCchhhhhHHHHHHHHHHHHHHhcc---CCcEEEeecCCCccChhhHhH---hhh-hhccccCcc---ccccC
Q 044485          146 ------AATHAYTSSKHGLLGLMKNTAVELGR---FGIRVNCVSPYAVSTPLAKDF---LKL-ADDGLGGMY---SNLKG  209 (257)
Q Consensus       146 ------~~~~~y~~sK~a~~~~~~~l~~e~~~---~gi~v~~i~pg~v~t~~~~~~---~~~-~~~~~~~~~---~~~~~  209 (257)
                            .+...|+.||.+.+.+++.++.++.-   .++.++.+.|+...+.+....   ... .........   .....
T Consensus       151 ~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  230 (340)
T PLN02653        151 SETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASR  230 (340)
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCccee
Confidence                  12457999999999999999888642   234556666764332111111   100 010000111   12234


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          210 AVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       210 ~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .++..+|+|++++.++....    +..+++.+|..++
T Consensus       231 d~i~v~D~a~a~~~~~~~~~----~~~yni~~g~~~s  263 (340)
T PLN02653        231 DWGFAGDYVEAMWLMLQQEK----PDDYVVATEESHT  263 (340)
T ss_pred             cceeHHHHHHHHHHHHhcCC----CCcEEecCCCcee
Confidence            67899999999998886531    4568888776544

>PRK06720 hypothetical protein; Provisional

Probab=99.80  E-value=2.2e-18  Score=133.14  Aligned_cols=126  Identities=27%  Similarity=0.514  Sum_probs=99.9

Q ss_pred             cccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            4 NLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         4 ~~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      ..|.+++++|+++||||++|||.++++.|+++|++|++++|+.+.+++..+++...+   .++.++.+|+++.+++++++
T Consensus         8 ~~~~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~v   84 (169)
T PRK06720          8 GVMKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLG---GEALFVSYDMEKQGDWQRVI   84 (169)
T ss_pred             CccccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHH
Confidence            335567899999999999999999999999999999999999887777777765332   23678899999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML  136 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  136 (257)
                      +++.+.+|++|++|||||..... .++++.+.++ ++  .+|+.+.+...+.+
T Consensus        85 ~~~~~~~G~iDilVnnAG~~~~~-~~~~~~~~~~-~~--~~~~~~~~~~~~~~  133 (169)
T PRK06720         85 SITLNAFSRIDMLFQNAGLYKID-SIFSRQQEND-SN--VLCINDVWIEIKQL  133 (169)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCC-CcccccchhH-hh--ceeccHHHHHHHHH
Confidence            99999999999999999986532 5566656555 44  45555555554444

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.80  E-value=1.5e-18  Score=140.35  Aligned_cols=212  Identities=16%  Similarity=0.111  Sum_probs=154.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCe--EEEeeCcc-h-hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAK--VLIADIKD-D-LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~--Vi~~~r~~-~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +++|||||.|.||.++++.+.++..+  |+.++.=. . .++.+ ..+...    .+..++++|+.|.+.+.+++++.  
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~~~~----~~~~fv~~DI~D~~~v~~~~~~~--   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADVEDS----PRYRFVQGDICDRELVDRLFKEY--   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-HhhhcC----CCceEEeccccCHHHHHHHHHhc--
Confidence            47999999999999999999998754  66665421 1 22222 222221    23889999999999999998864  


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hh--------------hccc
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GV--------------CGII  143 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~--------------~~~~  143 (257)
                         .+|+++|-|+-.      -.+.+.++....+++|+.|++.+..++.           |+              ....
T Consensus        74 ---~~D~VvhfAAES------HVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~t  144 (340)
T COG1088          74 ---QPDAVVHFAAES------HVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETT  144 (340)
T ss_pred             ---CCCeEEEechhc------cccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCC
Confidence               699999999843      4566677788999999999999865551           11              1223


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc---------ccccCCCCCH
Q 044485          144 GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY---------SNLKGAVLEP  214 (257)
Q Consensus       144 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~  214 (257)
                      |..+.++|++||||-+.|+|+..+.|   |+.++...+..-..|...+..-++....+...         ....+.|+.+
T Consensus       145 p~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~V  221 (340)
T COG1088         145 PYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYV  221 (340)
T ss_pred             CCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEe
Confidence            45667899999999999999999886   89999999988877764322212111111111         2333568889


Q ss_pred             HHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          215 EDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       215 ~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +|-++++...+.+..   .|+++++.||.-..
T Consensus       222 eDh~~ai~~Vl~kg~---~GE~YNIgg~~E~~  250 (340)
T COG1088         222 EDHCRAIDLVLTKGK---IGETYNIGGGNERT  250 (340)
T ss_pred             HhHHHHHHHHHhcCc---CCceEEeCCCccch
Confidence            999999999887754   39999999987554

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.78  E-value=1.1e-17  Score=142.91  Aligned_cols=212  Identities=18%  Similarity=0.168  Sum_probs=141.1

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .+||++|||||+|+||.+++++|+++|++|+++.|+....++..+..... +...++.++.+|++++++++++++     
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~-----   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALD-GAKERLKLFKADLLEESSFEQAIE-----   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhcc-CCCCceEEEecCCCCcchHHHHHh-----
Confidence            56899999999999999999999999999999998876544433322211 111247889999999998888776     


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH------------Hhhhcc-ccCC----------
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML------------LGVCGI-IGGA----------  146 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~------------~s~~~~-~~~~----------  146 (257)
                        ++|+|||+|+....   ...    +...+.+++|+.++.++...+            +|.... .+.+          
T Consensus        77 --~~d~vih~A~~~~~---~~~----~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E  147 (322)
T PLN02986         77 --GCDAVFHTASPVFF---TVK----DPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDE  147 (322)
T ss_pred             --CCCEEEEeCCCcCC---CCC----CchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCc
Confidence              59999999996421   111    113456788888888775443            122111 1110          


Q ss_pred             -----------CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH----hhhhhcccc--CccccccC
Q 044485          147 -----------ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF----LKLADDGLG--GMYSNLKG  209 (257)
Q Consensus       147 -----------~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~----~~~~~~~~~--~~~~~~~~  209 (257)
                                 ....|+.||.+.+.+++.+.+++   |+++++++|+.+.+|.....    .........  ........
T Consensus       148 ~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~  224 (322)
T PLN02986        148 TFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFY  224 (322)
T ss_pred             ccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCc
Confidence                       12469999999999888877653   89999999999988753211    000000000  01111223


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCcccccEEEecCc
Q 044485          210 AVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG  242 (257)
Q Consensus       210 ~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG  242 (257)
                      .++.++|+|++++.++....  ..| .++++|+
T Consensus       225 ~~v~v~Dva~a~~~al~~~~--~~~-~yni~~~  254 (322)
T PLN02986        225 RFVDVRDVALAHIKALETPS--ANG-RYIIDGP  254 (322)
T ss_pred             ceeEHHHHHHHHHHHhcCcc--cCC-cEEEecC
Confidence            57899999999998886542  234 6788544

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.78  E-value=2.6e-17  Score=145.99  Aligned_cols=220  Identities=17%  Similarity=0.098  Sum_probs=144.3

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch---h----hH---------hHHHHhccCCCCCCCceeEe
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD---L----GE---------SVCKDIGSSSSSASGCSYVH   70 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~---~----~~---------~~~~~~~~~~~~~~~v~~~~   70 (257)
                      ...+++|++|||||+|+||++++++|+++|++|++++|...   .    .+         +..+.+....  ..++.++.
T Consensus        42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~v~~v~  119 (442)
T PLN02572         42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVS--GKEIELYV  119 (442)
T ss_pred             CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhh--CCcceEEE
Confidence            45688899999999999999999999999999999874321   0    00         0011111111  12378999


Q ss_pred             cCCCCHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hh
Q 044485           71 CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GV  139 (257)
Q Consensus        71 ~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~  139 (257)
                      +|++|.+++.+++++.     ++|+|||+|+...   ......+++++...+++|+.++.++.....           |.
T Consensus       120 ~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~---~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS  191 (442)
T PLN02572        120 GDICDFEFLSEAFKSF-----EPDAVVHFGEQRS---APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGT  191 (442)
T ss_pred             CCCCCHHHHHHHHHhC-----CCCEEEECCCccc---ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEec
Confidence            9999999999888763     6999999997642   233344455667788999999999854441           11


Q ss_pred             hcccc-------------------------CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh---
Q 044485          140 CGIIG-------------------------GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD---  191 (257)
Q Consensus       140 ~~~~~-------------------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~---  191 (257)
                      ...++                         ..+...|+.||.+.+.+++..++.   +|+.+..++|+.+..|....   
T Consensus       192 ~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~~~~~~~  268 (442)
T PLN02572        192 MGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETMM  268 (442)
T ss_pred             ceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCCCccccc
Confidence            11111                         112347999999999999877655   58999999999998875321   


Q ss_pred             ----------------Hh-hhhhccc-cC---cc--ccccCCCCCHHHHHHHHHHhcCCCCCcccc--cEEEecC
Q 044485          192 ----------------FL-KLADDGL-GG---MY--SNLKGAVLEPEDAAEAALYLGSDESKCVSG--HNLVVDG  241 (257)
Q Consensus       192 ----------------~~-~~~~~~~-~~---~~--~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G--~~~~~dg  241 (257)
                                      .. ....... +.   ..  ....+.++.++|++++++.++....  ..|  ..+++.+
T Consensus       269 ~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~--~~g~~~i~Nigs  341 (442)
T PLN02572        269 DEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA--KPGEFRVFNQFT  341 (442)
T ss_pred             ccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh--hcCceeEEEeCC
Confidence                            00 0000000 00   11  1223467899999999998876431  234  4677744

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.77  E-value=6.4e-17  Score=139.36  Aligned_cols=217  Identities=16%  Similarity=0.076  Sum_probs=134.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh-----hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-----GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++...+......  ..++.++.+|++|.+++.++++.. 
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~-   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVN--KARMKLHYGDLTDSSNLRRIIDEI-   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhcccccc--ccceeEEEeccCCHHHHHHHHHhC-
Confidence            689999999999999999999999999999987642     111111111100  123788999999999998888764 


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhcccc----------
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIG----------  144 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~----------  144 (257)
                          ++|+|||+|+....  .    ...+.....+++|+.++.++...+.             |.....+          
T Consensus        78 ----~~d~ViH~Aa~~~~--~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~  147 (343)
T TIGR01472        78 ----KPTEIYNLAAQSHV--K----VSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNET  147 (343)
T ss_pred             ----CCCEEEECCccccc--c----hhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCC
Confidence                58999999997532  1    1122235566788888887754432             1111112          


Q ss_pred             --CCCCchhhhhHHHHHHHHHHHHHHhcc---CCcEEEeecCCCccChh---hHhHhh-hhhcc-ccCcc--ccccCCCC
Q 044485          145 --GAATHAYTSSKHGLLGLMKNTAVELGR---FGIRVNCVSPYAVSTPL---AKDFLK-LADDG-LGGMY--SNLKGAVL  212 (257)
Q Consensus       145 --~~~~~~y~~sK~a~~~~~~~l~~e~~~---~gi~v~~i~pg~v~t~~---~~~~~~-~~~~~-~~~~~--~~~~~~~~  212 (257)
                        ..+...|+.||.+.+.+++.+++++.-   .++.++...|+.-+...   ...... ..... .....  ......++
T Consensus       148 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i  227 (343)
T TIGR01472       148 TPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWG  227 (343)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCce
Confidence              123457999999999999999887632   12233444454221111   111111 11110 00111  22345678


Q ss_pred             CHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          213 EPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       213 ~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ..+|++++++.++....    +..+++.+|...+
T Consensus       228 ~V~D~a~a~~~~~~~~~----~~~yni~~g~~~s  257 (343)
T TIGR01472       228 HAKDYVEAMWLMLQQDK----PDDYVIATGETHS  257 (343)
T ss_pred             eHHHHHHHHHHHHhcCC----CccEEecCCCcee
Confidence            99999999988775432    3468888776544

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.76  E-value=9e-17  Score=138.70  Aligned_cols=222  Identities=16%  Similarity=0.038  Sum_probs=145.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCC--CCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSS--SASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .+.+|++|||||+|.||.+++++|.++|++|++++|.........+......+  ...++.++.+|+.|.+++..+++  
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--   89 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--   89 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--
Confidence            56779999999999999999999999999999999865432222222111000  01237789999999888777665  


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------HhhhccccC-----------
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGIIGG-----------  145 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~~~-----------  145 (257)
                           .+|+|||+|+.....      .+.++....+++|+.++.++....          .|..+..+.           
T Consensus        90 -----~~d~ViHlAa~~~~~------~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~  158 (348)
T PRK15181         90 -----NVDYVLHQAALGSVP------RSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERI  158 (348)
T ss_pred             -----CCCEEEECccccCch------hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCC
Confidence                 489999999965321      112334567889999999886554          122222221           


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh----------Hhh-hhhccccCcc--ccccCCC
Q 044485          146 -AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD----------FLK-LADDGLGGMY--SNLKGAV  211 (257)
Q Consensus       146 -~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~----------~~~-~~~~~~~~~~--~~~~~~~  211 (257)
                       .+...|+.+|.+.+.+++..+.+   +|+++..+.|+.+..|....          +.. ......-...  ....+.+
T Consensus       159 ~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~  235 (348)
T PRK15181        159 GRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDF  235 (348)
T ss_pred             CCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEee
Confidence             12347999999999998887655   48999999999887764211          111 1100000011  1222457


Q ss_pred             CCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          212 LEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       212 ~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +..+|++++++..+........|+.+++.+|...+
T Consensus       236 i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s  270 (348)
T PRK15181        236 CYIENVIQANLLSATTNDLASKNKVYNVAVGDRTS  270 (348)
T ss_pred             EEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEe
Confidence            88999999998766432222468899998876644

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.76  E-value=8.1e-17  Score=139.30  Aligned_cols=214  Identities=16%  Similarity=0.172  Sum_probs=141.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEE-EeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVL-IADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi-~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      |++|||||+|+||+++++.|.++|+.++ +++|.... .... .+.... ...++.++.+|++|.+++++++++.     
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~~-~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   73 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNLM-SLAPVA-QSERFAFEKVDICDRAELARVFTEH-----   73 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cchh-hhhhcc-cCCceEEEECCCcChHHHHHHHhhc-----
Confidence            6899999999999999999999998754 45544321 1111 111100 1123778899999999998887752     


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------------hhcccc--------
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------------VCGIIG--------  144 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------------~~~~~~--------  144 (257)
                      ++|+|||+||....      ..+.+++...+++|+.++..+...+..                   ..+.++        
T Consensus        74 ~~D~Vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~  147 (355)
T PRK10217         74 QPDCVMHLAAESHV------DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDF  147 (355)
T ss_pred             CCCEEEECCcccCc------chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCC
Confidence            59999999996432      233456788999999999988665432                   111111        


Q ss_pred             ------CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh------Hhhhhhcccc-Ccc--ccccC
Q 044485          145 ------GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD------FLKLADDGLG-GMY--SNLKG  209 (257)
Q Consensus       145 ------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~------~~~~~~~~~~-~~~--~~~~~  209 (257)
                            ..+...|+.||.+.+.+++.+++++   ++++..+.|+.+..|....      .......... ...  .....
T Consensus       148 ~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  224 (355)
T PRK10217        148 FTETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIR  224 (355)
T ss_pred             cCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeee
Confidence                  1234579999999999999988775   6788888887776654310      1110000000 011  11234


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          210 AVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       210 ~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .++.++|++++++.++...   ..|+.+++.+|..++
T Consensus       225 ~~i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~s  258 (355)
T PRK10217        225 DWLYVEDHARALYCVATTG---KVGETYNIGGHNERK  258 (355)
T ss_pred             CcCcHHHHHHHHHHHHhcC---CCCCeEEeCCCCccc
Confidence            5789999999999887653   357889998886643

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.76  E-value=3.9e-17  Score=143.01  Aligned_cols=224  Identities=19%  Similarity=0.181  Sum_probs=169.7

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ...+.||++|||||+|.||+++++++++.+.. +++.+|++-++.....+++...+ ..++.++-+|+.|.+.++.++++
T Consensus       245 ~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~~~~~~~igdVrD~~~~~~~~~~  323 (588)
T COG1086         245 GAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-ELKLRFYIGDVRDRDRVERAMEG  323 (588)
T ss_pred             HhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC-CcceEEEecccccHHHHHHHHhc
Confidence            34589999999999999999999999999866 89999999998888888877544 45689999999999999998885


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------hhhccccCCCCchhhhhHHH
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------GVCGIIGGAATHAYTSSKHG  157 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------s~~~~~~~~~~~~y~~sK~a  157 (257)
                      .     ++|+++|.|+.=+   -|..+.   .+.+.+..|+.|+.++..+..        -++......+...|+++|..
T Consensus       324 ~-----kvd~VfHAAA~KH---VPl~E~---nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvmGaTKr~  392 (588)
T COG1086         324 H-----KVDIVFHAAALKH---VPLVEY---NPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVMGATKRL  392 (588)
T ss_pred             C-----CCceEEEhhhhcc---Ccchhc---CHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchHhhHHHHH
Confidence            4     5999999999633   334443   457888999999999977663        22333444556789999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEeecCCCccC------hhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          158 LLGLMKNTAVELGRFGIRVNCVSPYAVST------PLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       158 ~~~~~~~l~~e~~~~gi~v~~i~pg~v~t------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      .+.++.+++.+....+.+++.|+=|.|-.      |.+++....- ....-......+.+++..|.++.++......   
T Consensus       393 aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~G-gplTvTdp~mtRyfMTI~EAv~LVlqA~a~~---  468 (588)
T COG1086         393 AEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEG-GPLTVTDPDMTRFFMTIPEAVQLVLQAGAIA---  468 (588)
T ss_pred             HHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcC-CCccccCCCceeEEEEHHHHHHHHHHHHhhc---
Confidence            99999999988776689999999998854      2333322211 0000000222345788999999999877554   


Q ss_pred             ccccEEEecCceeee
Q 044485          232 VSGHNLVVDGGFAIV  246 (257)
Q Consensus       232 ~~G~~~~~dgG~~~~  246 (257)
                      -.|+++.+|-|-..+
T Consensus       469 ~gGeifvldMGepvk  483 (588)
T COG1086         469 KGGEIFVLDMGEPVK  483 (588)
T ss_pred             CCCcEEEEcCCCCeE
Confidence            479999999876543

>PLN02240 UDP-glucose 4-epimerase

Probab=99.75  E-value=1.8e-16  Score=136.88  Aligned_cols=226  Identities=15%  Similarity=0.164  Sum_probs=142.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCC-CCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSS-SSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+.+|++|||||+|+||.+++++|+++|++|++++|......+..+.+.... ....++.++.+|++|++++..++++. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            3557999999999999999999999999999999875432222211111110 01123788999999999998887652 


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------Hhhhcccc------------C
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGIIG------------G  145 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~~------------~  145 (257)
                          .+|+|||+|+....      ..+.+++.+.+++|+.++..+...+          .|..+..+            .
T Consensus        81 ----~~d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~  150 (352)
T PLN02240         81 ----RFDAVIHFAGLKAV------GESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPL  150 (352)
T ss_pred             ----CCCEEEEccccCCc------cccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCC
Confidence                69999999996532      1123456778899999999876544          12222222            1


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChh------------hH---hHhh-hhhccccC--cc---
Q 044485          146 AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPL------------AK---DFLK-LADDGLGG--MY---  204 (257)
Q Consensus       146 ~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~------------~~---~~~~-~~~~~~~~--~~---  204 (257)
                      .+...|+.+|.+.+.+++.++.+.  .++++..+.|+.+..+.            ..   .... ........  ..   
T Consensus       151 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  228 (352)
T PLN02240        151 SATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGND  228 (352)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCC
Confidence            234579999999999999887552  35677777654433211            00   0111 00000000  00   


Q ss_pred             -----ccccCCCCCHHHHHHHHHHhcCCC--CCcccccEEEecCceeeee
Q 044485          205 -----SNLKGAVLEPEDAAEAALYLGSDE--SKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       205 -----~~~~~~~~~~~~~a~~~~~l~s~~--~~~~~G~~~~~dgG~~~~~  247 (257)
                           ......++.++|++++++.++...  .....|+.+++.+|..++.
T Consensus       229 ~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~  278 (352)
T PLN02240        229 YPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSV  278 (352)
T ss_pred             CCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeH
Confidence                 111234678999999988766432  1124578999988876653

>PLN02650 dihydroflavonol-4-reductase

Probab=99.74  E-value=3.1e-16  Score=135.51  Aligned_cols=200  Identities=16%  Similarity=0.136  Sum_probs=134.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ..|++|||||+|.||.+++++|+++|++|++++|+.+..++....... .+...++.++.+|++|.+.++++++      
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~v~~Dl~d~~~~~~~~~------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDL-PGATTRLTLWKADLAVEGSFDDAIR------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhc-cCCCCceEEEEecCCChhhHHHHHh------
Confidence            458999999999999999999999999999999987665544332211 1111237889999999998887765      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------Hhhhccc-c----CC--------
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------LGVCGII-G----GA--------  146 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------~s~~~~~-~----~~--------  146 (257)
                       .+|+|||+|+....     ...+  .....+++|+.++.++...+           .|..+.. +    .+        
T Consensus        77 -~~d~ViH~A~~~~~-----~~~~--~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~  148 (351)
T PLN02650         77 -GCTGVFHVATPMDF-----ESKD--PENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWS  148 (351)
T ss_pred             -CCCEEEEeCCCCCC-----CCCC--chhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCC
Confidence             48999999985421     1111  13467788999988875544           1111111 0    00        


Q ss_pred             ----------CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh-----HhhhhhccccC--cc-cccc
Q 044485          147 ----------ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD-----FLKLADDGLGG--MY-SNLK  208 (257)
Q Consensus       147 ----------~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~-----~~~~~~~~~~~--~~-~~~~  208 (257)
                                +...|+.||.+.+.+++.++++   +|++++.++|+.+.+|....     ...........  .. ....
T Consensus       149 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (351)
T PLN02650        149 DLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQ  225 (351)
T ss_pred             chhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCC
Confidence                      1137999999999999988776   58999999999998885321     11000000000  00 0112


Q ss_pred             CCCCCHHHHHHHHHHhcCCC
Q 044485          209 GAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       209 ~~~~~~~~~a~~~~~l~s~~  228 (257)
                      +.++.++|++++++.++...
T Consensus       226 r~~v~V~Dva~a~~~~l~~~  245 (351)
T PLN02650        226 GQFVHLDDLCNAHIFLFEHP  245 (351)
T ss_pred             cceeeHHHHHHHHHHHhcCc
Confidence            46789999999999988653

>PLN02214 cinnamoyl-CoA reductase

Probab=99.74  E-value=4.1e-16  Score=134.28  Aligned_cols=205  Identities=19%  Similarity=0.199  Sum_probs=139.1

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH-HHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV-CKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~-~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+..... .+.+...   ..++.++.+|++|.++++++++    
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~----   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGG---KERLILCKADLQDYEALKAAID----   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCC---CCcEEEEecCcCChHHHHHHHh----
Confidence            5678999999999999999999999999999999986543221 2222211   1237788999999998888775    


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------HhhhccccCC-----------
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------LGVCGIIGGA-----------  146 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------~s~~~~~~~~-----------  146 (257)
                         ++|+|||+|+...           +++...+++|+.++.++...+           +|..+..+.+           
T Consensus        81 ---~~d~Vih~A~~~~-----------~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~  146 (342)
T PLN02214         81 ---GCDGVFHTASPVT-----------DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDES  146 (342)
T ss_pred             ---cCCEEEEecCCCC-----------CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcc
Confidence               5999999998542           124677888999999876554           2222222110           


Q ss_pred             ----------CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH-----hhhhhccccC--ccccccC
Q 044485          147 ----------ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF-----LKLADDGLGG--MYSNLKG  209 (257)
Q Consensus       147 ----------~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~-----~~~~~~~~~~--~~~~~~~  209 (257)
                                ....|+.||.+.+.+++.++.++   |+++..++|+.+..|.....     ..........  .......
T Consensus       147 ~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  223 (342)
T PLN02214        147 CWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQ  223 (342)
T ss_pred             cCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCc
Confidence                      12369999999999998877663   89999999999988753210     0000000000  1111223


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCcccccEEEecC
Q 044485          210 AVLEPEDAAEAALYLGSDESKCVSGHNLVVDG  241 (257)
Q Consensus       210 ~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dg  241 (257)
                      .++.++|+|++++.++....  ..| .+++.+
T Consensus       224 ~~i~V~Dva~a~~~al~~~~--~~g-~yn~~~  252 (342)
T PLN02214        224 AYVDVRDVALAHVLVYEAPS--ASG-RYLLAE  252 (342)
T ss_pred             CeeEHHHHHHHHHHHHhCcc--cCC-cEEEec
Confidence            57899999999998886532  234 566654

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.74  E-value=2.2e-16  Score=131.30  Aligned_cols=214  Identities=18%  Similarity=0.133  Sum_probs=146.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+++|+||||||.||..|++.|+++|+.|..+.|+++..++. +.+....+...+...+..|++|++++++.++      
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~-~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKT-EHLRKLEGAKERLKLFKADLLDEGSFDKAID------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhH-HHHHhcccCcccceEEeccccccchHHHHHh------
Confidence            679999999999999999999999999999999999874442 2222333333458999999999999999988      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH------------HhhhccccC-CC----------
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML------------LGVCGIIGG-AA----------  147 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~------------~s~~~~~~~-~~----------  147 (257)
                       +.|+|+|.|......     ..+  .-.+.++..+.|+.++....            +|.++.... +.          
T Consensus        78 -gcdgVfH~Asp~~~~-----~~~--~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~  149 (327)
T KOG1502|consen   78 -GCDGVFHTASPVDFD-----LED--PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEE  149 (327)
T ss_pred             -CCCEEEEeCccCCCC-----CCC--cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccc
Confidence             699999999865431     111  22467788888888875544            344444332 11          


Q ss_pred             -C----------chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh----hhccccC---ccccccC
Q 044485          148 -T----------HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL----ADDGLGG---MYSNLKG  209 (257)
Q Consensus       148 -~----------~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~----~~~~~~~---~~~~~~~  209 (257)
                       |          .-|+.||..-+.-+-.++.|   .|+....|+|+.|-.|........    .-...++   .......
T Consensus       150 ~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~  226 (327)
T KOG1502|consen  150 SWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWL  226 (327)
T ss_pred             cCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCce
Confidence             1          14778876666555555544   479999999999988765541111    0111111   1112222


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCcccccEEEecCcee
Q 044485          210 AVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       210 ~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~  244 (257)
                      .+++.+|+|.+.+++.....  -.|+.+-......
T Consensus       227 ~~VdVrDVA~AHv~a~E~~~--a~GRyic~~~~~~  259 (327)
T KOG1502|consen  227 AFVDVRDVALAHVLALEKPS--AKGRYICVGEVVS  259 (327)
T ss_pred             eeEeHHHHHHHHHHHHcCcc--cCceEEEecCccc
Confidence            36899999999999887765  3588776665554

>PLN02583 cinnamoyl-CoA reductase

Probab=99.73  E-value=4.6e-16  Score=131.44  Aligned_cols=210  Identities=12%  Similarity=0.023  Sum_probs=137.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh--hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL--GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +-.+|++|||||+|+||++++++|+++|++|+++.|+...  ..+....+...   ..++.++.+|++|.+++.+++.  
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~---~~~~~~~~~Dl~d~~~~~~~l~--   77 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE---EERLKVFDVDPLDYHSILDALK--   77 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC---CCceEEEEecCCCHHHHHHHHc--
Confidence            4457899999999999999999999999999999986432  22222333211   1247889999999998876554  


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH------------hhhccccC-C-------
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL------------GVCGIIGG-A-------  146 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~------------s~~~~~~~-~-------  146 (257)
                           .+|.++|.++....    .   . +++.+.+++|+.+++++.+.+.            |..+.... .       
T Consensus        78 -----~~d~v~~~~~~~~~----~---~-~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~  144 (297)
T PLN02583         78 -----GCSGLFCCFDPPSD----Y---P-SYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKD  144 (297)
T ss_pred             -----CCCEEEEeCccCCc----c---c-ccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCC
Confidence                 58999987653321    1   1 2357889999999999876552            22221101 0       


Q ss_pred             ----CC----------chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCC
Q 044485          147 ----AT----------HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL  212 (257)
Q Consensus       147 ----~~----------~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (257)
                          .+          ..|+.||...+.+++.++++   .|+++++|+|+.+.+|............. .........++
T Consensus       145 ~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~-~~~~~~~~~~v  220 (297)
T PLN02583        145 VDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNPYLKGAA-QMYENGVLVTV  220 (297)
T ss_pred             CCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchhhhcCCc-ccCcccCcceE
Confidence                01          15999999999998877655   48999999999998886432111101000 01111112368


Q ss_pred             CHHHHHHHHHHhcCCCCCcccccEEEecCce
Q 044485          213 EPEDAAEAALYLGSDESKCVSGHNLVVDGGF  243 (257)
Q Consensus       213 ~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~  243 (257)
                      +++|+|++++..+....  ..| .+.+-++.
T Consensus       221 ~V~Dva~a~~~al~~~~--~~~-r~~~~~~~  248 (297)
T PLN02583        221 DVNFLVDAHIRAFEDVS--SYG-RYLCFNHI  248 (297)
T ss_pred             EHHHHHHHHHHHhcCcc--cCC-cEEEecCC
Confidence            89999999998886432  234 45555553

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.73  E-value=6.3e-16  Score=132.89  Aligned_cols=199  Identities=17%  Similarity=0.190  Sum_probs=133.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHH--HhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK--DIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .+.++++|||||+|+||++++++|+++|++|+++.|+.+.......  .+...    .++.++.+|++|++++.++++  
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~d~~~~~~~~~--   79 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQEL----GDLKIFGADLTDEESFEAPIA--   79 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCC----CceEEEEcCCCChHHHHHHHh--
Confidence            3457899999999999999999999999999988888654433221  12111    137889999999998877664  


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhcccc-----------
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGIIG-----------  144 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~~~-----------  144 (257)
                           ++|+|||+|+...     ....  +.....+++|+.++.++...+.           |..+..+           
T Consensus        80 -----~~d~vih~A~~~~-----~~~~--~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~  147 (338)
T PLN00198         80 -----GCDLVFHVATPVN-----FASE--DPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVM  147 (338)
T ss_pred             -----cCCEEEEeCCCCc-----cCCC--ChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCcee
Confidence                 5899999998532     1111  2234567889999988765541           1111111           


Q ss_pred             --------------CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH----h----hh-hhccc-
Q 044485          145 --------------GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF----L----KL-ADDGL-  200 (257)
Q Consensus       145 --------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~----~----~~-~~~~~-  200 (257)
                                    .++...|+.||.+.+.+++.++.+   +|+.+++++|+.+..|.....    .    .. ..... 
T Consensus       148 ~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~  224 (338)
T PLN00198        148 NEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFL  224 (338)
T ss_pred             ccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccc
Confidence                          112346999999999999887765   489999999999988753210    0    00 00000 


Q ss_pred             -cCccccc----cCCCCCHHHHHHHHHHhcCCC
Q 044485          201 -GGMYSNL----KGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       201 -~~~~~~~----~~~~~~~~~~a~~~~~l~s~~  228 (257)
                       ......+    ...++.++|++++++.++...
T Consensus       225 ~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~  257 (338)
T PLN00198        225 INGLKGMQMLSGSISITHVEDVCRAHIFLAEKE  257 (338)
T ss_pred             cccccccccccCCcceeEHHHHHHHHHHHhhCc
Confidence             0000000    135789999999999888654

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.72  E-value=4.9e-16  Score=134.36  Aligned_cols=204  Identities=18%  Similarity=0.155  Sum_probs=134.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .-.++++|||||+|+||++++++|+++|++|++++|+.+..+...+.+..    ..++.++.+|+++.+++.++++    
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~----   78 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE----GDRLRLFRADLQEEGSFDEAVK----   78 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc----CCeEEEEECCCCCHHHHHHHHc----
Confidence            45678999999999999999999999999999999987655555444322    1247889999999998877764    


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHH--HHHHhhhchhhhHHHHHH-----------HhhhccccC----------
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEF--ERILSINLVGAFLGRNML-----------LGVCGIIGG----------  145 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~-----------~s~~~~~~~----------  145 (257)
                         .+|+|||+|+..... ......+.+.+  ...++.|+.++..+...+           .|..+..+.          
T Consensus        79 ---~~d~Vih~A~~~~~~-~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~  154 (353)
T PLN02896         79 ---GCDGVFHVAASMEFD-VSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAV  154 (353)
T ss_pred             ---CCCEEEECCccccCC-ccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCc
Confidence               589999999975431 11112223322  345667778888765443           111111110          


Q ss_pred             ----------------CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH-----hhhhhccccC--
Q 044485          146 ----------------AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF-----LKLADDGLGG--  202 (257)
Q Consensus       146 ----------------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~-----~~~~~~~~~~--  202 (257)
                                      +....|+.||.+.+.+++.+++++   |+++.+++|+.+..|.....     ..........  
T Consensus       155 ~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~  231 (353)
T PLN02896        155 VDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSK  231 (353)
T ss_pred             cCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcc
Confidence                            011379999999999998887664   89999999998888753210     0000000000  


Q ss_pred             ccc------c--ccCCCCCHHHHHHHHHHhcCC
Q 044485          203 MYS------N--LKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       203 ~~~------~--~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ...      .  ....++.++|+|++++.++..
T Consensus       232 ~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        232 LFSILSAVNSRMGSIALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             ccccccccccccCceeEEeHHHHHHHHHHHHhC
Confidence            000      0  012468999999999988854

>PLN02686 cinnamoyl-CoA reductase

Probab=99.71  E-value=6e-16  Score=134.40  Aligned_cols=207  Identities=16%  Similarity=0.138  Sum_probs=127.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCC---CCCCceeEecCCCCHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSS---SASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      .+.++|++|||||+|+||.+++++|+++|++|+++.|+.+..+++. ++.....   ....+.++.+|++|.+++.++++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            3577899999999999999999999999999998888866554442 2211100   01137789999999999988776


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCC-----CCCCCCCHHHHHHHHhhhchhhhHHHHH--HHhhh-ccc--------c----
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVK-----PNILDNDQAEFERILSINLVGAFLGRNM--LLGVC-GII--------G----  144 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~--~~s~~-~~~--------~----  144 (257)
                             .+|.+||.|+......     ..+.+...+.....++...... .+.+.  .+|.. ...        +    
T Consensus       128 -------~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~-~v~r~V~~SS~~~~vyg~~~~~~~~~~i~  199 (367)
T PLN02686        128 -------GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTE-SVRKCVFTSSLLACVWRQNYPHDLPPVID  199 (367)
T ss_pred             -------hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcC-CccEEEEeccHHHhcccccCCCCCCcccC
Confidence                   4789999988754321     1111222333333333322110 00000  01111 000        0    


Q ss_pred             ----------CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh-----HhhhhhccccCccccccC
Q 044485          145 ----------GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD-----FLKLADDGLGGMYSNLKG  209 (257)
Q Consensus       145 ----------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~-----~~~~~~~~~~~~~~~~~~  209 (257)
                                ..+...|+.||.+.+.+++.++.+   +|+++++++|+.+.+|....     ........ .........
T Consensus       200 E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~-~~~~g~g~~  275 (367)
T PLN02686        200 EESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNSTATIAYLKGA-QEMLADGLL  275 (367)
T ss_pred             CCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCChhHHHHhcCC-CccCCCCCc
Confidence                      011236999999999999887765   58999999999999985321     11111110 111111112


Q ss_pred             CCCCHHHHHHHHHHhcCC
Q 044485          210 AVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       210 ~~~~~~~~a~~~~~l~s~  227 (257)
                      .++.++|++++++.++..
T Consensus       276 ~~v~V~Dva~A~~~al~~  293 (367)
T PLN02686        276 ATADVERLAEAHVCVYEA  293 (367)
T ss_pred             CeEEHHHHHHHHHHHHhc
Confidence            367899999999887753

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.71  E-value=9.2e-16  Score=130.25  Aligned_cols=211  Identities=18%  Similarity=0.171  Sum_probs=140.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC--CeEEEeeCcch--hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           14 VALITGGARGIGECTARLFSKHG--AKVLIADIKDD--LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +++||||+|+||.+++++|++.|  ++|++.+|...  ..+.. +.+..    ..++.++.+|++|+++++++++..   
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~---   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENL-ADLED----NPRYRFVKGDIGDRELVSRLFTEH---   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhh-hhhcc----CCCcEEEEcCCcCHHHHHHHHhhc---
Confidence            48999999999999999999987  78988876431  11111 22211    123778999999999998887753   


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-----------hhcccc-------------C
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-----------VCGIIG-------------G  145 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-----------~~~~~~-------------~  145 (257)
                        ++|+|||+|+....      ..+.+.....+++|+.++..+...+..           .....+             .
T Consensus        73 --~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~  144 (317)
T TIGR01181        73 --QPDAVVHFAAESHV------DRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPL  144 (317)
T ss_pred             --CCCEEEEcccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCC
Confidence              59999999996532      223345667889999998887654421           111111             1


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh--Hh----hhhhccc-cCcc--ccccCCCCCHHH
Q 044485          146 AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD--FL----KLADDGL-GGMY--SNLKGAVLEPED  216 (257)
Q Consensus       146 ~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~--~~----~~~~~~~-~~~~--~~~~~~~~~~~~  216 (257)
                      .+...|+.+|.+.+.+++.++.++   ++++..++|+.+..+....  ..    ....... -...  ......++.++|
T Consensus       145 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  221 (317)
T TIGR01181       145 APSSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVED  221 (317)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHH
Confidence            123469999999999999887764   7899999999887654211  11    1000000 0001  111224678999


Q ss_pred             HHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          217 AAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       217 ~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +++++..++.+.   ..|+.+++.++..++
T Consensus       222 ~a~~~~~~~~~~---~~~~~~~~~~~~~~s  248 (317)
T TIGR01181       222 HCRAIYLVLEKG---RVGETYNIGGGNERT  248 (317)
T ss_pred             HHHHHHHHHcCC---CCCceEEeCCCCcee
Confidence            999999888653   357889987776554

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.71  E-value=1e-15  Score=130.58  Aligned_cols=209  Identities=17%  Similarity=0.166  Sum_probs=135.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ++|++|||||+|+||++++++|+++|++|+++.|+............ ..+...++.++.+|++|++++..+++      
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLA-LDGAKERLHLFKANLLEEGSFDSVVD------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHh-ccCCCCceEEEeccccCcchHHHHHc------
Confidence            46899999999999999999999999999999988654333222111 11111247889999999988877765      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH------------Hhhhcc-ccC-C----------
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML------------LGVCGI-IGG-A----------  146 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~------------~s~~~~-~~~-~----------  146 (257)
                       ++|+|||+|+....   ...  ..  ....+++|+.++.++...+            +|.... .+. +          
T Consensus        76 -~~d~Vih~A~~~~~---~~~--~~--~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~  147 (322)
T PLN02662         76 -GCEGVFHTASPFYH---DVT--DP--QAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDET  147 (322)
T ss_pred             -CCCEEEEeCCcccC---CCC--Ch--HHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcc
Confidence             58999999986421   111  11  2467788999988875543            222111 110 0          


Q ss_pred             ----C------CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH----hhhhhccccC--ccccccCC
Q 044485          147 ----A------THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF----LKLADDGLGG--MYSNLKGA  210 (257)
Q Consensus       147 ----~------~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~----~~~~~~~~~~--~~~~~~~~  210 (257)
                          .      ...|+.+|.+.+.+++.+.++   .|++++.++|+.+.+|.....    ..........  ........
T Consensus       148 ~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (322)
T PLN02662        148 WFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYR  224 (322)
T ss_pred             cCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcC
Confidence                0      136999999999988877655   489999999999988753211    0000000000  11112235


Q ss_pred             CCCHHHHHHHHHHhcCCCCCcccccEEEec
Q 044485          211 VLEPEDAAEAALYLGSDESKCVSGHNLVVD  240 (257)
Q Consensus       211 ~~~~~~~a~~~~~l~s~~~~~~~G~~~~~d  240 (257)
                      ++.++|+|++++.++....  ..|. +++.
T Consensus       225 ~i~v~Dva~a~~~~~~~~~--~~~~-~~~~  251 (322)
T PLN02662        225 WVDVRDVANAHIQAFEIPS--ASGR-YCLV  251 (322)
T ss_pred             eEEHHHHHHHHHHHhcCcC--cCCc-EEEe
Confidence            7899999999998886532  2354 4554

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.70  E-value=2.3e-15  Score=129.34  Aligned_cols=219  Identities=15%  Similarity=0.131  Sum_probs=136.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      ++|||||+|+||.+++++|+++|++|++++|...........+....+  .++.++.+|++|+++++++++.     .++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~-----~~~   74 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGG--KHPTFVEGDIRNEALLTEILHD-----HAI   74 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcC--CCceEEEccCCCHHHHHHHHhc-----CCC
Confidence            699999999999999999999999999887654332222222221111  2367789999999998887763     369


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------HhhhccccC-------------CCCch
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGIIGG-------------AATHA  150 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~~~-------------~~~~~  150 (257)
                      |+|||+|+....  ..    ..+.....+++|+.++..+...+          .|..+..+.             .+...
T Consensus        75 d~vvh~a~~~~~--~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~  148 (338)
T PRK10675         75 DTVIHFAGLKAV--GE----SVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSP  148 (338)
T ss_pred             CEEEECCccccc--cc----hhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCCh
Confidence            999999987532  11    12234567788998888875544          122222110             23568


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChh------------hHhHh----hhhhccccCc------c----
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPL------------AKDFL----KLADDGLGGM------Y----  204 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~------------~~~~~----~~~~~~~~~~------~----  204 (257)
                      |+.+|.+.+.+++.++++.  .++++..++|+.+..+.            .....    .........+      .    
T Consensus       149 Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (338)
T PRK10675        149 YGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTED  226 (338)
T ss_pred             hHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCC
Confidence            9999999999999987664  24666666654333321            00111    0000000000      0    


Q ss_pred             ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeee
Q 044485          205 SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       205 ~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      ......++..+|+|++++.++........|+.+++.+|..++-
T Consensus       227 g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  269 (338)
T PRK10675        227 GTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSV  269 (338)
T ss_pred             CcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeH
Confidence            1112347889999999887765421223468899988876543

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.69  E-value=9.7e-17  Score=132.19  Aligned_cols=217  Identities=17%  Similarity=0.154  Sum_probs=140.3

Q ss_pred             EEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCC-CCC--CceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           15 ALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSS-SAS--GCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~-~~~--~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ||||||+|.||+.++++|++.+. .+++++|++..+-++.+++....+ ...  .+..+.+|++|.+.+.+++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            79999999999999999999995 599999999998888888743221 111  1345688999999999988754    


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------hhhccccCCCCchhhhhHHHHHHHH
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------GVCGIIGGAATHAYTSSKHGLLGLM  162 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------s~~~~~~~~~~~~y~~sK~a~~~~~  162 (257)
                       ++|+|+|.|+.=+   -++.+..   ..+.+++|+.|+.++.....        .++......+...|++||...+.++
T Consensus        77 -~pdiVfHaAA~Kh---Vpl~E~~---p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~PtnvmGatKrlaE~l~  149 (293)
T PF02719_consen   77 -KPDIVFHAAALKH---VPLMEDN---PFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTNVMGATKRLAEKLV  149 (293)
T ss_dssp             -T-SEEEE---------HHHHCCC---HHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--SHHHHHHHHHHHHH
T ss_pred             -CCCEEEEChhcCC---CChHHhC---HHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCcHHHHHHHHHHHHH
Confidence             6999999999643   2344433   47889999999999977663        2333344556789999999999999


Q ss_pred             HHHHHHhccCCcEEEeecCCCccCh------hhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccE
Q 044485          163 KNTAVELGRFGIRVNCVSPYAVSTP------LAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHN  236 (257)
Q Consensus       163 ~~l~~e~~~~gi~v~~i~pg~v~t~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~  236 (257)
                      .+.+....+.+.++.+|+=|.|-..      .+.+....-. ...-......+.+++++|.++.++..+...   ..|+.
T Consensus       150 ~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~-PlTvT~p~mtRffmti~EAv~Lvl~a~~~~---~~gei  225 (293)
T PF02719_consen  150 QAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGG-PLTVTDPDMTRFFMTIEEAVQLVLQAAALA---KGGEI  225 (293)
T ss_dssp             HHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTS-SEEECETT-EEEEE-HHHHHHHHHHHHHH-----TTEE
T ss_pred             HHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCC-cceeCCCCcEEEEecHHHHHHHHHHHHhhC---CCCcE
Confidence            9999888778899999999887542      2222221110 000000222245789999999999776544   36889


Q ss_pred             EEecCceeee
Q 044485          237 LVVDGGFAIV  246 (257)
Q Consensus       237 ~~~dgG~~~~  246 (257)
                      +.+|=|..+.
T Consensus       226 fvl~mg~~v~  235 (293)
T PF02719_consen  226 FVLDMGEPVK  235 (293)
T ss_dssp             EEE---TCEE
T ss_pred             EEecCCCCcC
Confidence            8888776554

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.68  E-value=5.6e-15  Score=127.84  Aligned_cols=217  Identities=17%  Similarity=0.140  Sum_probs=133.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC--CeEEEeeCcchhh---HhHHHHhccCCC---C-C-CCceeEecCCCCHHH--HHH
Q 044485           14 VALITGGARGIGECTARLFSKHG--AKVLIADIKDDLG---ESVCKDIGSSSS---S-A-SGCSYVHCDVTKEKD--IEN   81 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~---~~~~~~~~~~~~---~-~-~~v~~~~~D~~~~~~--v~~   81 (257)
                      +++||||||+||++++++|+++|  ++|+++.|+.+..   ++..+.+.....   . . .++.++.+|++++..  -..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  7799999976522   222222211100   0 0 348899999987531  011


Q ss_pred             HHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC------
Q 044485           82 AVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG------  145 (257)
Q Consensus        82 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~------  145 (257)
                      ...++.   ..+|+|||||+.....         ..+....++|+.++..+.....          |..+..+.      
T Consensus        81 ~~~~~~---~~~d~vih~a~~~~~~---------~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~  148 (367)
T TIGR01746        81 EWERLA---ENVDTIVHNGALVNWV---------YPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTV  148 (367)
T ss_pred             HHHHHH---hhCCEEEeCCcEeccC---------CcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCc
Confidence            112221   3699999999975321         1245667788888887755431          12111111      


Q ss_pred             -----------CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH------hH----hhh-hhccccCc
Q 044485          146 -----------AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK------DF----LKL-ADDGLGGM  203 (257)
Q Consensus       146 -----------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~------~~----~~~-~~~~~~~~  203 (257)
                                 .....|+.+|.+.+.+++.++.    .|++++.++||.+.++...      ..    ... .....-..
T Consensus       149 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~  224 (367)
T TIGR01746       149 TEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPD  224 (367)
T ss_pred             cccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCC
Confidence                       1124699999999999876543    3899999999998875110      00    000 00000000


Q ss_pred             cccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          204 YSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       204 ~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .......++++++++++++.++.......+|+++++.++..++
T Consensus       225 ~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s  267 (367)
T TIGR01746       225 SPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVS  267 (367)
T ss_pred             CCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCC
Confidence            0111123788999999999988765433458899998865443

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.68  E-value=4.3e-15  Score=126.65  Aligned_cols=216  Identities=16%  Similarity=0.161  Sum_probs=139.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      ++|||||+|+||.+++++|.++|++|++++|......+....+....    ++.++.+|++++++++++++.     +++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~-----~~~   71 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERIT----RVTFVEGDLRDRELLDRLFEE-----HKI   71 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcccc----ceEEEECCCCCHHHHHHHHHh-----CCC
Confidence            47999999999999999999999999888765433222222222111    377889999999999888763     379


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC------------CCCchh
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG------------AATHAY  151 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~------------~~~~~y  151 (257)
                      |++|||||....  ..    ..++..+.++.|+.++..+...+.          +.....+.            .....|
T Consensus        72 d~vv~~ag~~~~--~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y  145 (328)
T TIGR01179        72 DAVIHFAGLIAV--GE----SVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY  145 (328)
T ss_pred             cEEEECccccCc--ch----hhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence            999999997532  11    222345667788888887755441          11122111            123579


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH-----------hHh----hhhhccccCc------c----cc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK-----------DFL----KLADDGLGGM------Y----SN  206 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~-----------~~~----~~~~~~~~~~------~----~~  206 (257)
                      +.+|++.+.+++.++++.  .++++..+.|+.+..+...           ...    ..........      +    ..
T Consensus       146 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  223 (328)
T TIGR01179       146 GRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT  223 (328)
T ss_pred             HHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence            999999999999987652  4789999999877665211           000    0000000000      0    01


Q ss_pred             ccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          207 LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       207 ~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ....++..+|++++++.++........|+.+++.++..++
T Consensus       224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s  263 (328)
T TIGR01179       224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFS  263 (328)
T ss_pred             eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCccc
Confidence            1134688999999999887543222457888887776544

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.67  E-value=7.9e-15  Score=128.36  Aligned_cols=215  Identities=16%  Similarity=0.193  Sum_probs=136.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKH-GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ..+.++||||||+|.||++++++|.++ |++|++++|+.+......+....  ....++.++.+|++|.+.++++++   
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~--~~~~~~~~~~~Dl~d~~~l~~~~~---   85 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTV--PWSGRIQFHRINIKHDSRLEGLIK---   85 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccc--cCCCCeEEEEcCCCChHHHHHHhh---
Confidence            456678999999999999999999998 59999999876544332211100  011248899999999988877664   


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------HhhhccccC-------------
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------LGVCGIIGG-------------  145 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------~s~~~~~~~-------------  145 (257)
                          .+|+|||+|+....  ..... .   ..+.+..|+.++..+....         .|....++.             
T Consensus        86 ----~~d~ViHlAa~~~~--~~~~~-~---~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~  155 (386)
T PLN02427         86 ----MADLTINLAAICTP--ADYNT-R---PLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLR  155 (386)
T ss_pred             ----cCCEEEEcccccCh--hhhhh-C---hHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCcccccc
Confidence                48999999996532  11111 1   1233456887777654333         122222110             


Q ss_pred             ---------------------CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh-------------
Q 044485          146 ---------------------AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD-------------  191 (257)
Q Consensus       146 ---------------------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~-------------  191 (257)
                                           .....|+.+|.+.+.+++..++.   +|+++..++|+.+..|....             
T Consensus       156 ~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~  232 (386)
T PLN02427        156 QDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR  232 (386)
T ss_pred             cccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCccccccccccccch
Confidence                                 01136999999999999876544   58999999999888764210             


Q ss_pred             Hhh-hhhccc-cCc---cc--cccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCc
Q 044485          192 FLK-LADDGL-GGM---YS--NLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG  242 (257)
Q Consensus       192 ~~~-~~~~~~-~~~---~~--~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG  242 (257)
                      ... ...... ...   ..  .....++..+|+|++++.++.... ...|+.+++.+|
T Consensus       233 ~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~-~~~g~~yni~~~  289 (386)
T PLN02427        233 VLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA-RANGHIFNVGNP  289 (386)
T ss_pred             HHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc-cccCceEEeCCC
Confidence            000 000000 000   11  112357899999999998876431 245788898775

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.66  E-value=4.2e-15  Score=126.92  Aligned_cols=198  Identities=18%  Similarity=0.197  Sum_probs=134.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      ++++||||+|+||.++++.|+++|++|++++|+.+.....    ..     ..+.++.+|++|.++++++++       .
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-----~~~~~~~~D~~~~~~l~~~~~-------~   64 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----EG-----LDVEIVEGDLRDPASLRKAVA-------G   64 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----cc-----CCceEEEeeCCCHHHHHHHHh-------C
Confidence            3799999999999999999999999999999986543221    11     137889999999998877765       5


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC-C---------------
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG-A---------------  146 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~-~---------------  146 (257)
                      +|+|||+|+....     ..   +++...+++|+.++..+...+.          |.....+. .               
T Consensus        65 ~d~vi~~a~~~~~-----~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~  136 (328)
T TIGR03466        65 CRALFHVAADYRL-----WA---PDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDD  136 (328)
T ss_pred             CCEEEEeceeccc-----CC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCccc
Confidence            8999999985321     11   2246678889988888765442          11111111 0               


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh------H-hhhhhccccCccccccCCCCCHHHHHH
Q 044485          147 ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD------F-LKLADDGLGGMYSNLKGAVLEPEDAAE  219 (257)
Q Consensus       147 ~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~a~  219 (257)
                      ....|+.+|.+.+.+++.+..+   .|+++..++|+.+..+....      . ........ .........++.++|+|+
T Consensus       137 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~  212 (328)
T TIGR03466       137 MIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKM-PAYVDTGLNLVHVDDVAE  212 (328)
T ss_pred             ccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCC-ceeeCCCcceEEHHHHHH
Confidence            1246999999999999988765   48999999998886654211      0 00000000 001111124678999999


Q ss_pred             HHHHhcCCCCCcccccEEEecC
Q 044485          220 AALYLGSDESKCVSGHNLVVDG  241 (257)
Q Consensus       220 ~~~~l~s~~~~~~~G~~~~~dg  241 (257)
                      ++..++...   ..|+.+.+.|
T Consensus       213 a~~~~~~~~---~~~~~~~~~~  231 (328)
T TIGR03466       213 GHLLALERG---RIGERYILGG  231 (328)
T ss_pred             HHHHHHhCC---CCCceEEecC
Confidence            998877653   3677787753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.66  E-value=7.3e-15  Score=126.94  Aligned_cols=210  Identities=19%  Similarity=0.191  Sum_probs=135.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc--hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           14 VALITGGARGIGECTARLFSKHGAK-VLIADIKD--DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ++|||||+|+||.+++++|+++|.. |+.+++..  ...+... .+   .. ..++.++.+|++|.+++++++++.    
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~---~~-~~~~~~~~~Dl~d~~~~~~~~~~~----   72 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DV---SD-SERYVFEHADICDRAELDRIFAQH----   72 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hc---cc-CCceEEEEecCCCHHHHHHHHHhc----
Confidence            6999999999999999999999976 55555432  1122221 11   11 123778999999999998888752    


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------------hhhcccc-------
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------------GVCGIIG-------  144 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------------s~~~~~~-------  144 (257)
                       ++|+|||+|+....  .    ...+.....+++|+.++..+.+...                   |.....+       
T Consensus        73 -~~d~vih~A~~~~~--~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~  145 (352)
T PRK10084         73 -QPDAVMHLAAESHV--D----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDE  145 (352)
T ss_pred             -CCCEEEECCcccCC--c----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccc
Confidence             69999999996532  1    1112345678999999998754332                   1111111       


Q ss_pred             ---------------CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH------hHhhhhhcccc-C
Q 044485          145 ---------------GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK------DFLKLADDGLG-G  202 (257)
Q Consensus       145 ---------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~------~~~~~~~~~~~-~  202 (257)
                                     ..+...|+.+|.+.+.+++.+++++   |+++..+.|+.+..|...      ........... .
T Consensus       146 ~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~  222 (352)
T PRK10084        146 VENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP  222 (352)
T ss_pred             ccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeE
Confidence                           1123579999999999999988775   667777777777665421      11010100000 0


Q ss_pred             cc--ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceee
Q 044485          203 MY--SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       203 ~~--~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ..  ......++.++|++++++.++...   ..|+.+++.++...
T Consensus       223 ~~~~g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~~  264 (352)
T PRK10084        223 IYGKGDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNEK  264 (352)
T ss_pred             EeCCCCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCcC
Confidence            11  112234788999999998877643   35788998877654

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.65  E-value=2.9e-15  Score=121.95  Aligned_cols=201  Identities=21%  Similarity=0.284  Sum_probs=142.2

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCcc
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLD   94 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~id   94 (257)
                      ||||||+|.||.+++++|.++|..|+...|+.........+.        ++.++.+|+.|.+.++++++..     .+|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~--------~~~~~~~dl~~~~~~~~~~~~~-----~~d   67 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL--------NVEFVIGDLTDKEQLEKLLEKA-----NID   67 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT--------TEEEEESETTSHHHHHHHHHHH-----TES
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc--------eEEEEEeecccccccccccccc-----Cce
Confidence            799999999999999999999999888887766543333222        2889999999999999998876     699


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccCC------------CCchhh
Q 044485           95 IMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGGA------------ATHAYT  152 (257)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~~------------~~~~y~  152 (257)
                      .|||+|+....      ..+.+.....++.|+.++..+...+.          +.....+..            +...|+
T Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~  141 (236)
T PF01370_consen   68 VVIHLAAFSSN------PESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYG  141 (236)
T ss_dssp             EEEEEBSSSSH------HHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHH
T ss_pred             EEEEeeccccc------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999996421      11224557777888888888765552          223222222            234699


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChh----h-HhH-hhhhhccccCc-c-----ccccCCCCCHHHHHHH
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPL----A-KDF-LKLADDGLGGM-Y-----SNLKGAVLEPEDAAEA  220 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~----~-~~~-~~~~~~~~~~~-~-----~~~~~~~~~~~~~a~~  220 (257)
                      .+|...+.+.+.+.+++   ++++.+++|+.+..+.    . ... ........... .     ......++..+|++++
T Consensus       142 ~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  218 (236)
T PF01370_consen  142 ASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEA  218 (236)
T ss_dssp             HHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHH
T ss_pred             ccccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHH
Confidence            99999999999988775   8999999998887776    1 111 11111111111 1     1222346789999999


Q ss_pred             HHHhcCCCCCcccccEEEe
Q 044485          221 ALYLGSDESKCVSGHNLVV  239 (257)
Q Consensus       221 ~~~l~s~~~~~~~G~~~~~  239 (257)
                      ++.++....  ..|+.+++
T Consensus       219 ~~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  219 IVAALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHHHHSC--TTTEEEEE
T ss_pred             HHHHHhCCC--CCCCEEEe
Confidence            999997765  67888876

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.65  E-value=1.2e-14  Score=119.86  Aligned_cols=202  Identities=14%  Similarity=0.087  Sum_probs=121.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCH-HHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKE-KDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~   87 (257)
                      +..++++|||||+|+||++++++|+++|++|+++.|+.+..++...   .    ...+.++.+|++|. +++.+   .+.
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~----~~~~~~~~~Dl~d~~~~l~~---~~~   83 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---Q----DPSLQIVRADVTEGSDKLVE---AIG   83 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---c----CCceEEEEeeCCCCHHHHHH---Hhh
Confidence            4567899999999999999999999999999999998765433221   1    12378899999983 33222   220


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhcccc----CCCCchhhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIG----GAATHAYTS  153 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~----~~~~~~y~~  153 (257)
                         .++|+||+|+|..... .+.         ..+++|+.++..+.+.+.          |..+..+    .+....|..
T Consensus        84 ---~~~d~vi~~~g~~~~~-~~~---------~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~  150 (251)
T PLN00141         84 ---DDSDAVICATGFRRSF-DPF---------APWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIF  150 (251)
T ss_pred             ---cCCCEEEECCCCCcCC-CCC---------CceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhH
Confidence               2699999999864221 111         113456666665544441          2222211    112334666


Q ss_pred             hHHHHHHHHHHHHHH--hccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          154 SKHGLLGLMKNTAVE--LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       154 sK~a~~~~~~~l~~e--~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      .|.+...+...+..|  +...|++++.|+||++.++..........      .......+++++|+|+.++.++....  
T Consensus       151 ~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~------~~~~~~~~i~~~dvA~~~~~~~~~~~--  222 (251)
T PLN00141        151 LNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEP------EDTLYEGSISRDQVAEVAVEALLCPE--  222 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECC------CCccccCcccHHHHHHHHHHHhcChh--
Confidence            565444433222222  46679999999999997764221100000      01112236899999999999986543  


Q ss_pred             ccccEEEecC
Q 044485          232 VSGHNLVVDG  241 (257)
Q Consensus       232 ~~G~~~~~dg  241 (257)
                      ..+.++.+-+
T Consensus       223 ~~~~~~~~~~  232 (251)
T PLN00141        223 SSYKVVEIVA  232 (251)
T ss_pred             hcCcEEEEec
Confidence            2344444443

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.63  E-value=5.8e-15  Score=123.37  Aligned_cols=209  Identities=18%  Similarity=0.195  Sum_probs=139.8

Q ss_pred             EEecCCCchHHHHHHHHHHcC--CeEEEeeCcchhhH-hHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           16 LITGGARGIGECTARLFSKHG--AKVLIADIKDDLGE-SVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        16 lItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |||||+|.||.+|+++|.++|  .+|.++++...... +..+..   .    ...++.+|++|++++.++++       +
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~---~----~~~~~~~Di~d~~~l~~a~~-------g   66 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKS---G----VKEYIQGDITDPESLEEALE-------G   66 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcc---c----ceeEEEeccccHHHHHHHhc-------C
Confidence            699999999999999999999  78988887765322 111111   1    13389999999999999887       6


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------Hhhhcccc-----------------
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------LGVCGIIG-----------------  144 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------~s~~~~~~-----------------  144 (257)
                      .|+|||+|+......       ....+.++++|+.|+-++....           +|.....+                 
T Consensus        67 ~d~V~H~Aa~~~~~~-------~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~  139 (280)
T PF01073_consen   67 VDVVFHTAAPVPPWG-------DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYP  139 (280)
T ss_pred             CceEEEeCccccccC-------cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCccc
Confidence            899999999764311       2345788999999999986655           22222221                 


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHH-Hhc-cCCcEEEeecCCCccChhhHhHhhh----hhcc-ccCcc--ccccCCCCCHH
Q 044485          145 GAATHAYTSSKHGLLGLMKNTAV-ELG-RFGIRVNCVSPYAVSTPLAKDFLKL----ADDG-LGGMY--SNLKGAVLEPE  215 (257)
Q Consensus       145 ~~~~~~y~~sK~a~~~~~~~l~~-e~~-~~gi~v~~i~pg~v~t~~~~~~~~~----~~~~-~~~~~--~~~~~~~~~~~  215 (257)
                      ......|+.||+..|.++..... ++. ...++..+|+|..|..|........    .... .....  ......++.++
T Consensus       140 ~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~  219 (280)
T PF01073_consen  140 SSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVE  219 (280)
T ss_pred             ccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHH
Confidence            01223799999999999877654 222 1258999999998888754332111    1111 11111  11123467899


Q ss_pred             HHHHHHHHhcC---CC--CCcccccEEEecCceee
Q 044485          216 DAAEAALYLGS---DE--SKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       216 ~~a~~~~~l~s---~~--~~~~~G~~~~~dgG~~~  245 (257)
                      ++|.+.+..+.   +.  ...+.|+.+.+.+|.-.
T Consensus       220 NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~  254 (280)
T PF01073_consen  220 NVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPV  254 (280)
T ss_pred             HHHHHHHHHHHHhccccccccCCCcEEEEECCCcc
Confidence            99998874322   12  35589999999988654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.63  E-value=2.4e-14  Score=123.59  Aligned_cols=206  Identities=17%  Similarity=0.173  Sum_probs=132.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCC-CHHHHHHHHHHHHHHc
Q 044485           13 KVALITGGARGIGECTARLFSKH-GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT-KEKDIENAVNTAVTQY   90 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~v~~~~~~~~~~~   90 (257)
                      |++|||||+|.||++++++|+++ |++|++++|+.+......   ..     ..+.++.+|++ +.+.+.++++      
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~---~~-----~~~~~~~~Dl~~~~~~~~~~~~------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV---NH-----PRMHFFEGDITINKEWIEYHVK------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc---cC-----CCeEEEeCCCCCCHHHHHHHHc------
Confidence            57999999999999999999986 699999998764332211   11     13788999998 6666555443      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------HhhhccccC----------------
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------LGVCGIIGG----------------  145 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------~s~~~~~~~----------------  145 (257)
                       ++|+|||+|+...+.  .    ..++....+++|+.++.++....         .|....++.                
T Consensus        68 -~~d~ViH~aa~~~~~--~----~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~  140 (347)
T PRK11908         68 -KCDVILPLVAIATPA--T----YVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYG  140 (347)
T ss_pred             -CCCEEEECcccCChH--H----hhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccC
Confidence             599999999965321  1    11223566788888887765443         122111110                


Q ss_pred             ---CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH--------------hHhhhhhcccc-Ccc--c
Q 044485          146 ---AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK--------------DFLKLADDGLG-GMY--S  205 (257)
Q Consensus       146 ---~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~--------------~~~~~~~~~~~-~~~--~  205 (257)
                         .+...|+.+|.+.+.+++.++.+   +|+.+..+.|+.+..|...              ........... ...  .
T Consensus       141 ~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g  217 (347)
T PRK11908        141 PINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGG  217 (347)
T ss_pred             cCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCC
Confidence               01226999999999999887755   4788888998877665321              11100000000 011  1


Q ss_pred             cccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCc
Q 044485          206 NLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG  242 (257)
Q Consensus       206 ~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG  242 (257)
                      .....++..+|++++++.++........|+.+++.++
T Consensus       218 ~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        218 SQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             ceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence            2234588999999999988865432245889999775

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.62  E-value=1.6e-14  Score=134.41  Aligned_cols=210  Identities=16%  Similarity=0.169  Sum_probs=136.9

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHH-HHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKH-GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKD-IENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-v~~~~~~~~   87 (257)
                      .++++||||||+|.||++++++|.++ |++|+.++|........   ..     ..++.++.+|++|.++ ++++++   
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~~-----~~~~~~~~gDl~d~~~~l~~~l~---  381 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---LG-----HPRFHFVEGDISIHSEWIEYHIK---  381 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---cC-----CCceEEEeccccCcHHHHHHHhc---
Confidence            45789999999999999999999986 79999999876533221   11     1237888999998655 333332   


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------HhhhccccC-------------
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------LGVCGIIGG-------------  145 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------~s~~~~~~~-------------  145 (257)
                          ++|+|||+|+....  ....    ++....+++|+.++..+....         .|....++.             
T Consensus       382 ----~~D~ViHlAa~~~~--~~~~----~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~  451 (660)
T PRK08125        382 ----KCDVVLPLVAIATP--IEYT----RNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNL  451 (660)
T ss_pred             ----CCCEEEECccccCc--hhhc----cCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCcccccc
Confidence                59999999997543  1111    123456788888888765433         122221211             


Q ss_pred             ---C---CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh-----------Hhhhhhccc-cCcc---
Q 044485          146 ---A---ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD-----------FLKLADDGL-GGMY---  204 (257)
Q Consensus       146 ---~---~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~-----------~~~~~~~~~-~~~~---  204 (257)
                         +   ....|+.||.+.+.+++.++++   +|+++..+.|+.+..|....           ......... ....   
T Consensus       452 ~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~  528 (660)
T PRK08125        452 IVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLV  528 (660)
T ss_pred             ccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEe
Confidence               0   1236999999999999887665   47999999999888764211           000000000 1111   


Q ss_pred             --ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCce
Q 044485          205 --SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGF  243 (257)
Q Consensus       205 --~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~  243 (257)
                        ......++..+|++++++.++........|+.+++.+|.
T Consensus       529 g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        529 DGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             CCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence              112234788999999998887654323468889998763

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.61  E-value=7.9e-14  Score=113.63  Aligned_cols=210  Identities=17%  Similarity=0.166  Sum_probs=141.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +++|||||.|.||.+.+..|++.|++|++++.-.....+......        +.+++.|+.|.+.+++++++.     .
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~--------~~f~~gDi~D~~~L~~vf~~~-----~   67 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ--------FKFYEGDLLDRALLTAVFEEN-----K   67 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc--------CceEEeccccHHHHHHHHHhc-----C
Confidence            479999999999999999999999999999876555444443321        578999999999999998875     7


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------HhhhccccCCC------------Cch
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGIIGGAA------------THA  150 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~~~~~------------~~~  150 (257)
                      ||.|||.||...      -.-+.+...+-++.|+.++..|....          +|++..++.+.            ..+
T Consensus        68 idaViHFAa~~~------VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NP  141 (329)
T COG1087          68 IDAVVHFAASIS------VGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINP  141 (329)
T ss_pred             CCEEEECccccc------cchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCc
Confidence            999999999532      22345667888999999999986655          55555554433            458


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecC---------CCcc------ChhhHhHhhhhhcccc------Ccc----c
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSP---------YAVS------TPLAKDFLKLADDGLG------GMY----S  205 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~p---------g~v~------t~~~~~~~~~~~~~~~------~~~----~  205 (257)
                      |+.||...|.+.+.+++.+   +.++.+++=         |.+.      |..........-....      .-+    .
T Consensus       142 YG~sKlm~E~iL~d~~~a~---~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DG  218 (329)
T COG1087         142 YGRSKLMSEEILRDAAKAN---PFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDG  218 (329)
T ss_pred             chhHHHHHHHHHHHHHHhC---CCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCC
Confidence            9999999999999988875   455555442         2221      1111111110000000      000    2


Q ss_pred             cccCCCCCHHHHHHHHHHhcCCCCCcccc--cEEEecCceeee
Q 044485          206 NLKGAVLEPEDAAEAALYLGSDESKCVSG--HNLVVDGGFAIV  246 (257)
Q Consensus       206 ~~~~~~~~~~~~a~~~~~l~s~~~~~~~G--~~~~~dgG~~~~  246 (257)
                      ...+..+.+.|+|++-+..+.....  .|  ..+++..|...+
T Consensus       219 T~iRDYIHV~DLA~aH~~Al~~L~~--~g~~~~~NLG~G~G~S  259 (329)
T COG1087         219 TCIRDYIHVDDLADAHVLALKYLKE--GGSNNIFNLGSGNGFS  259 (329)
T ss_pred             CeeeeeeehhHHHHHHHHHHHHHHh--CCceeEEEccCCCcee
Confidence            3335567899999987655533222  23  478888877655

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.61  E-value=2.2e-14  Score=121.69  Aligned_cols=204  Identities=16%  Similarity=0.189  Sum_probs=127.8

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH--HcCC
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT--QYGK   92 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~--~~~~   92 (257)
                      +|||||+|.||++++++|+++|+.++++.|+.......             .....+|+.|..+.+.+++++.+  .+++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   68 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------------VNLVDLDIADYMDKEDFLAQIMAGDDFGD   68 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-------------HhhhhhhhhhhhhHHHHHHHHhcccccCC
Confidence            79999999999999999999999766665554321111             11223577776666666655442  2457


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------Hhhhcccc------------CCCCchh
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------LGVCGIIG------------GAATHAY  151 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------~s~~~~~~------------~~~~~~y  151 (257)
                      +|+|||+|+....  .   ....   ...++.|+.++..+....         .|..+..+            ..+...|
T Consensus        69 ~d~Vih~A~~~~~--~---~~~~---~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  140 (308)
T PRK11150         69 IEAIFHEGACSST--T---EWDG---KYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEEREYEKPLNVY  140 (308)
T ss_pred             ccEEEECceecCC--c---CCCh---HHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccCCCCCCCCHH
Confidence            9999999986432  1   1122   346788888888875544         12222211            1123579


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh------Hh-hhhhccc-cC---cc-c--cccCCCCCHHHH
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD------FL-KLADDGL-GG---MY-S--NLKGAVLEPEDA  217 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~------~~-~~~~~~~-~~---~~-~--~~~~~~~~~~~~  217 (257)
                      +.+|.+.+.+++.+..+   .++++..++|+.+..+....      .. ....... +.   .. .  .....++..+|+
T Consensus       141 ~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~  217 (308)
T PRK11150        141 GYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDV  217 (308)
T ss_pred             HHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHH
Confidence            99999999998887654   47889999998877764211      00 0000011 00   11 1  112356899999


Q ss_pred             HHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          218 AEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       218 a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +++++.++...    .|.++++.+|..++
T Consensus       218 a~a~~~~~~~~----~~~~yni~~~~~~s  242 (308)
T PRK11150        218 AAVNLWFWENG----VSGIFNCGTGRAES  242 (308)
T ss_pred             HHHHHHHHhcC----CCCeEEcCCCCcee
Confidence            99988877643    24588998776554

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.61  E-value=4.1e-14  Score=123.77  Aligned_cols=208  Identities=15%  Similarity=0.108  Sum_probs=129.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHh--HHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGES--VCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~--~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ..++++|||||+|+||++++++|+++|++|++++|+....+.  ..++.....   ..+.++.+|++|++++.++++...
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~---~~v~~v~~Dl~d~~~l~~~~~~~~  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKEL---PGAEVVFGDVTDADSLRKVLFSEG  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhc---CCceEEEeeCCCHHHHHHHHHHhC
Confidence            457899999999999999999999999999999998754321  111111111   137889999999999998887431


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------hhhccccCCCCchhhhhHHHHH
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------GVCGIIGGAATHAYTSSKHGLL  159 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------s~~~~~~~~~~~~y~~sK~a~~  159 (257)
                         +++|+||||++....  . .        ...+++|+.+...+.....        -+++.....+...|..+|...+
T Consensus       135 ---~~~D~Vi~~aa~~~~--~-~--------~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p~~~~~~sK~~~E  200 (390)
T PLN02657        135 ---DPVDVVVSCLASRTG--G-V--------KDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKPLLEFQRAKLKFE  200 (390)
T ss_pred             ---CCCcEEEECCccCCC--C-C--------ccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCcchHHHHHHHHHH
Confidence               269999999985321  1 0        1123455555555543331        1111111223446888898888


Q ss_pred             HHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcccc---ccCCCCCHHHHHHHHHHhcCCCCCcccccE
Q 044485          160 GLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSN---LKGAVLEPEDAAEAALYLGSDESKCVSGHN  236 (257)
Q Consensus       160 ~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~  236 (257)
                      ...+.     ...|++...++|+.+..+.............-.+...   +...+++.+|+|..++.++.+..  ..|+.
T Consensus       201 ~~l~~-----~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~--~~~~~  273 (390)
T PLN02657        201 AELQA-----LDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDES--KINKV  273 (390)
T ss_pred             HHHHh-----ccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcc--ccCCE
Confidence            77654     2468999999998776543321111111000001111   11125789999999998875432  35788


Q ss_pred             EEecC
Q 044485          237 LVVDG  241 (257)
Q Consensus       237 ~~~dg  241 (257)
                      +++.|
T Consensus       274 ~~Igg  278 (390)
T PLN02657        274 LPIGG  278 (390)
T ss_pred             EEcCC
Confidence            99876

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.60  E-value=8.8e-14  Score=129.86  Aligned_cols=216  Identities=18%  Similarity=0.119  Sum_probs=140.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHc--CCeEEEeeCcc--hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKH--GAKVLIADIKD--DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~--g~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      ..++|+||||||+|.||++++++|.++  +++|++++|..  +........ .    ...++.++.+|++|.+.+..++.
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~-~----~~~~v~~~~~Dl~d~~~~~~~~~   77 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS-K----SSPNFKFVKGDIASADLVNYLLI   77 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc-c----cCCCeEEEECCCCChHHHHHHHh
Confidence            356789999999999999999999998  67888888753  122221111 0    11248889999999988776543


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhcccc---------
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGIIG---------  144 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~~~---------  144 (257)
                      .     .++|+|||+|+.....      .+..+....+++|+.++..+.....           |....++         
T Consensus        78 ~-----~~~D~ViHlAa~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~  146 (668)
T PLN02260         78 T-----EGIDTIMHFAAQTHVD------NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVG  146 (668)
T ss_pred             h-----cCCCEEEECCCccCch------hhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccC
Confidence            2     2699999999975321      1122335667889888888755441           1111111         


Q ss_pred             ------CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh--Hhh-hhhc-cccCcc-----ccccC
Q 044485          145 ------GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD--FLK-LADD-GLGGMY-----SNLKG  209 (257)
Q Consensus       145 ------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~--~~~-~~~~-~~~~~~-----~~~~~  209 (257)
                            ..+...|+.+|.+.+.+++.+.++   .++++.+++|+.+..+....  ... .... ......     .....
T Consensus       147 ~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r  223 (668)
T PLN02260        147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVR  223 (668)
T ss_pred             ccccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceE
Confidence                  112357999999999999987766   37899999999887764311  100 0000 001111     11123


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          210 AVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       210 ~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .++..+|+|+++..++...   ..|+++++.++..++
T Consensus       224 ~~ihV~Dva~a~~~~l~~~---~~~~vyni~~~~~~s  257 (668)
T PLN02260        224 SYLYCEDVAEAFEVVLHKG---EVGHVYNIGTKKERR  257 (668)
T ss_pred             eeEEHHHHHHHHHHHHhcC---CCCCEEEECCCCeeE
Confidence            4688999999999887543   247889988776554

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.59  E-value=1.9e-13  Score=101.39  Aligned_cols=205  Identities=17%  Similarity=0.217  Sum_probs=147.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      -++++|.|+-|.+|.+++..|.++++.|.-++..+....             ..-..+..|-+=.++-++++.+.-+..+
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-------------d~sI~V~~~~swtEQe~~v~~~vg~sL~   69 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-------------DSSILVDGNKSWTEQEQSVLEQVGSSLQ   69 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-------------cceEEecCCcchhHHHHHHHHHHHHhhc
Confidence            468999999999999999999999999987776543210             1134566676667777777777766543


Q ss_pred             --CccEEEeCCCCCCCCC---CCCCCCCHHHHHHHHhhhchhhhHHHHHH-----H----hhhccccCCCCchhhhhHHH
Q 044485           92 --KLDIMFNNAGTVDEVK---PNILDNDQAEFERILSINLVGAFLGRNML-----L----GVCGIIGGAATHAYTSSKHG  157 (257)
Q Consensus        92 --~id~lv~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----~----s~~~~~~~~~~~~y~~sK~a  157 (257)
                        ++|.++|-||......   +.+.....-.|...+-...++....+..+     +    .-...-+.|+...|+++|+|
T Consensus        70 gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgMIGYGMAKaA  149 (236)
T KOG4022|consen   70 GEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGMIGYGMAKAA  149 (236)
T ss_pred             ccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcccchhHHHHH
Confidence              7999999998765321   22333333344444444444444444333     1    22344566788899999999


Q ss_pred             HHHHHHHHHHHhc--cCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccccc
Q 044485          158 LLGLMKNTAVELG--RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGH  235 (257)
Q Consensus       158 ~~~~~~~l~~e~~--~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~  235 (257)
                      +.+++++|+.+-.  +.|--+..|.|--.||||+|+++...+          +..+.+.+++++.++.+..+..+.-+|.
T Consensus       150 VHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~AD----------fssWTPL~fi~e~flkWtt~~~RPssGs  219 (236)
T KOG4022|consen  150 VHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNAD----------FSSWTPLSFISEHFLKWTTETSRPSSGS  219 (236)
T ss_pred             HHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCc----------ccCcccHHHHHHHHHHHhccCCCCCCCc
Confidence            9999999998864  467788899999999999998765332          4557889999999999998877777888


Q ss_pred             EEEe
Q 044485          236 NLVV  239 (257)
Q Consensus       236 ~~~~  239 (257)
                      .+.+
T Consensus       220 Llqi  223 (236)
T KOG4022|consen  220 LLQI  223 (236)
T ss_pred             eEEE
Confidence            7654

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.58  E-value=7.3e-14  Score=121.50  Aligned_cols=208  Identities=15%  Similarity=0.146  Sum_probs=133.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+|+||||||+|.||+++++.|.++|++|++++|......   .   ...   ..+.++.+|++|.+.+..+++      
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~---~---~~~---~~~~~~~~Dl~d~~~~~~~~~------   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM---S---EDM---FCHEFHLVDLRVMENCLKVTK------   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc---c---ccc---ccceEEECCCCCHHHHHHHHh------
Confidence            5689999999999999999999999999999998643211   0   000   014678899999887766553      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------Hhhhccc-----------------
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGII-----------------  143 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~-----------------  143 (257)
                       .+|+|||+|+.....  .....   +....+..|+.++.++...+          .|....+                 
T Consensus        85 -~~D~Vih~Aa~~~~~--~~~~~---~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~  158 (370)
T PLN02695         85 -GVDHVFNLAADMGGM--GFIQS---NHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDA  158 (370)
T ss_pred             -CCCEEEEcccccCCc--ccccc---CchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccC
Confidence             589999999865321  11111   12334566777777765433          1211111                 


Q ss_pred             -cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH----------hHhhhhhccccCc--c--cccc
Q 044485          144 -GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK----------DFLKLADDGLGGM--Y--SNLK  208 (257)
Q Consensus       144 -~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~----------~~~~~~~~~~~~~--~--~~~~  208 (257)
                       +..+...|+.+|.+.+.+++..+..   .|+++..+.|+.+..|...          .+....-.....+  .  ....
T Consensus       159 ~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~  235 (370)
T PLN02695        159 WPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQT  235 (370)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeE
Confidence             1223457999999999999887654   4899999999988887421          1111000000011  1  1112


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          209 GAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       209 ~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ..++..+|++++++.++...    .++.+++-+|..++
T Consensus       236 r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~~s  269 (370)
T PLN02695        236 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS  269 (370)
T ss_pred             EeEEeHHHHHHHHHHHHhcc----CCCceEecCCCcee
Confidence            34688999999999876543    25678887776544

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.54  E-value=3.2e-13  Score=113.34  Aligned_cols=189  Identities=16%  Similarity=0.124  Sum_probs=124.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      ++|||||+|.||.+++++|.++|++|++++|.                        .+|+.+.+++.++++..     .+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------------~~d~~~~~~~~~~~~~~-----~~   51 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------------QLDLTDPEALERLLRAI-----RP   51 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------------ccCCCCHHHHHHHHHhC-----CC
Confidence            47999999999999999999999999998874                        26899999988887642     58


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccccC------------CCCchhh
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGIIGG------------AATHAYT  152 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~~~------------~~~~~y~  152 (257)
                      |+|||+|+....  . .   ........+++|+.++..+...+.         |....++.            .+...|+
T Consensus        52 d~vi~~a~~~~~--~-~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~  125 (287)
T TIGR01214        52 DAVVNTAAYTDV--D-G---AESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDDATNPLNVYG  125 (287)
T ss_pred             CEEEECCccccc--c-c---cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhh
Confidence            999999996432  1 1   112345677888888888765542         22111111            1234799


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhh-Hh----Hhhhhhcc-ccCccccccCCCCCHHHHHHHHHHhcC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA-KD----FLKLADDG-LGGMYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~-~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      .+|.+.+.+++.+       +.++..++|+.+..+.. ..    ........ .-.........++..+|++++++.++.
T Consensus       126 ~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~  198 (287)
T TIGR01214       126 QSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQ  198 (287)
T ss_pred             HHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHh
Confidence            9999999888764       46789999998876542 11    11111100 000011122345678999999998886


Q ss_pred             CCCCcccccEEEecCceeee
Q 044485          227 DESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ...  ..|+.+++-++..++
T Consensus       199 ~~~--~~~~~~ni~~~~~~s  216 (287)
T TIGR01214       199 RLA--RARGVYHLANSGQCS  216 (287)
T ss_pred             hcc--CCCCeEEEECCCCcC
Confidence            531  235667776655443

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.54  E-value=2.3e-13  Score=116.06  Aligned_cols=194  Identities=11%  Similarity=0.077  Sum_probs=123.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      +++||||||.+|++++++|.++|++|++++|+.+......    ..     .+.++.+|++|++++..+++       ++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~----~~-----~v~~v~~Dl~d~~~l~~al~-------g~   65 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK----EW-----GAELVYGDLSLPETLPPSFK-------GV   65 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh----hc-----CCEEEECCCCCHHHHHHHHC-------CC
Confidence            7999999999999999999999999999999865432221    11     27889999999998877665       68


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------HhhhccccCCCCchhhhhHHHHHHHHH
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGIIGGAATHAYTSSKHGLLGLMK  163 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~~~~~~~~y~~sK~a~~~~~~  163 (257)
                      |+|||+++....           +.....++|+.++.++....          +|..+... .+...|..+|...+.+.+
T Consensus        66 d~Vi~~~~~~~~-----------~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~-~~~~~~~~~K~~~e~~l~  133 (317)
T CHL00194         66 TAIIDASTSRPS-----------DLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ-YPYIPLMKLKSDIEQKLK  133 (317)
T ss_pred             CEEEECCCCCCC-----------CccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc-cCCChHHHHHHHHHHHHH
Confidence            999998764311           01223445555555554333          12111111 123567788888776654


Q ss_pred             HHHHHhccCCcEEEeecCCCccChhhHhHh-hhhhccccCcc---ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEe
Q 044485          164 NTAVELGRFGIRVNCVSPYAVSTPLAKDFL-KLADDGLGGMY---SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVV  239 (257)
Q Consensus       164 ~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~  239 (257)
                             ..|++.+.+.|+.+...+..... .....  ....   ......++..+|+|++++.++....  ..|+++++
T Consensus       134 -------~~~l~~tilRp~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~ni  202 (317)
T CHL00194        134 -------KSGIPYTIFRLAGFFQGLISQYAIPILEK--QPIWITNESTPISYIDTQDAAKFCLKSLSLPE--TKNKTFPL  202 (317)
T ss_pred             -------HcCCCeEEEeecHHhhhhhhhhhhhhccC--CceEecCCCCccCccCHHHHHHHHHHHhcCcc--ccCcEEEe
Confidence                   25899999999865433221110 00000  0000   1111245778999999998886532  35899999


Q ss_pred             cCceeee
Q 044485          240 DGGFAIV  246 (257)
Q Consensus       240 dgG~~~~  246 (257)
                      .|+..++
T Consensus       203 ~g~~~~s  209 (317)
T CHL00194        203 VGPKSWN  209 (317)
T ss_pred             cCCCccC
Confidence            8886654

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.52  E-value=4.3e-13  Score=113.91  Aligned_cols=206  Identities=15%  Similarity=0.179  Sum_probs=128.9

Q ss_pred             EEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           15 ALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      +|||||+|.||.++++.|.++|+ .|++++|..... .. .++.        ...+..|+++.+.++.+.+.   .+.++
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~--------~~~~~~d~~~~~~~~~~~~~---~~~~~   67 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNLA--------DLVIADYIDKEDFLDRLEKG---AFGKI   67 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhhh--------heeeeccCcchhHHHHHHhh---ccCCC
Confidence            68999999999999999999998 688887654321 11 1110        12456788887766665442   23579


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------Hhhhcccc------------CCCCchhh
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------LGVCGIIG------------GAATHAYT  152 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------~s~~~~~~------------~~~~~~y~  152 (257)
                      |+|||+|+....        +.++....+++|+.++..+....         .|..+..+            ..+...|+
T Consensus        68 D~vvh~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~  139 (314)
T TIGR02197        68 EAIFHQGACSDT--------TETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEAGFREGRELERPLNVYG  139 (314)
T ss_pred             CEEEECccccCc--------cccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCCCcccccCcCCCCCHHH
Confidence            999999996421        12345667888998888875544         12222222            11345799


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH----------hHhhh-hhccccCcc--------ccccCCCCC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK----------DFLKL-ADDGLGGMY--------SNLKGAVLE  213 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~----------~~~~~-~~~~~~~~~--------~~~~~~~~~  213 (257)
                      .+|.+.+.+++....+. ..++++..+.|+.+..+...          ..... .....-...        ......++.
T Consensus       140 ~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  218 (314)
T TIGR02197       140 YSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVY  218 (314)
T ss_pred             HHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEE
Confidence            99999999998643221 23567888888777665421          00110 000000000        111134788


Q ss_pred             HHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          214 PEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       214 ~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .+|++++++.++..    ..+..+++.++..++
T Consensus       219 v~D~a~~i~~~~~~----~~~~~yni~~~~~~s  247 (314)
T TIGR02197       219 VKDVVDVNLWLLEN----GVSGIFNLGTGRARS  247 (314)
T ss_pred             HHHHHHHHHHHHhc----ccCceEEcCCCCCcc
Confidence            99999999988865    245688888876554

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.51  E-value=1.3e-12  Score=115.89  Aligned_cols=208  Identities=13%  Similarity=0.105  Sum_probs=131.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHh-HHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGES-VCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .-++++||||||+|.||++++++|.++|++|++++|......+ ......     ..++.++..|+.++.     +    
T Consensus       116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~-----~~~~~~i~~D~~~~~-----l----  181 (442)
T PLN02206        116 KRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFS-----NPNFELIRHDVVEPI-----L----  181 (442)
T ss_pred             ccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhcc-----CCceEEEECCccChh-----h----
Confidence            3467899999999999999999999999999998875432211 111111     123677888987652     1    


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------Hhhhcccc--------------
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------LGVCGIIG--------------  144 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------~s~~~~~~--------------  144 (257)
                         ..+|+|||+|+....  . ...   ++....+++|+.++.++....         .|....++              
T Consensus       182 ---~~~D~ViHlAa~~~~--~-~~~---~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~  252 (442)
T PLN02206        182 ---LEVDQIYHLACPASP--V-HYK---FNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGN  252 (442)
T ss_pred             ---cCCCEEEEeeeecch--h-hhh---cCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCCcccccc
Confidence               158999999986532  1 111   224567889999999886544         12222111              


Q ss_pred             ---CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH----hH-hhhhhcc-ccCcc-----ccccCC
Q 044485          145 ---GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK----DF-LKLADDG-LGGMY-----SNLKGA  210 (257)
Q Consensus       145 ---~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~----~~-~~~~~~~-~~~~~-----~~~~~~  210 (257)
                         ......|+.+|.+.+.+++...++   .|+++..+.|+.+..+...    .. ....... .....     ......
T Consensus       253 ~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rd  329 (442)
T PLN02206        253 VNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  329 (442)
T ss_pred             CCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEe
Confidence               111356999999999988876554   4788888888777665311    10 0000000 01111     111234


Q ss_pred             CCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          211 VLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       211 ~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ++..+|++++++.++...   . +..+++.+|..++
T Consensus       330 fi~V~Dva~ai~~a~e~~---~-~g~yNIgs~~~~s  361 (442)
T PLN02206        330 FQFVSDLVEGLMRLMEGE---H-VGPFNLGNPGEFT  361 (442)
T ss_pred             EEeHHHHHHHHHHHHhcC---C-CceEEEcCCCcee
Confidence            678999999999887543   2 3478888776544

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.49  E-value=8.7e-13  Score=111.64  Aligned_cols=193  Identities=16%  Similarity=0.177  Sum_probs=125.4

Q ss_pred             EEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCccE
Q 044485           16 LITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDI   95 (257)
Q Consensus        16 lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~id~   95 (257)
                      |||||+|.||.++++.|.+.|+.|+++.+.                       ..+|+++.++++++++..     .+|+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------------~~~Dl~~~~~l~~~~~~~-----~~d~   52 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------------KELDLTRQADVEAFFAKE-----KPTY   52 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------------ccCCCCCHHHHHHHHhcc-----CCCE
Confidence            699999999999999999999987765322                       137999999888877652     5899


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------Hhhhcccc----------------C-CCC
Q 044485           96 MFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGIIG----------------G-AAT  148 (257)
Q Consensus        96 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~~----------------~-~~~  148 (257)
                      |||+|+.....   ..  ..++....++.|+.++..+...+          .|.....+                . +..
T Consensus        53 Vih~A~~~~~~---~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  127 (306)
T PLN02725         53 VILAAAKVGGI---HA--NMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN  127 (306)
T ss_pred             EEEeeeeeccc---ch--hhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence            99999864310   00  01123456778888888875554          12222211                1 112


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH----------hHhhh----hhcccc-Cc-c--ccccCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK----------DFLKL----ADDGLG-GM-Y--SNLKGA  210 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~----------~~~~~----~~~~~~-~~-~--~~~~~~  210 (257)
                      ..|+.+|.+.+.+.+.+.+++   ++++..+.|+.+..+...          .....    ...... .. .  ......
T Consensus       128 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~  204 (306)
T PLN02725        128 EWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLRE  204 (306)
T ss_pred             chHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeec
Confidence            249999999999888876654   789999999988776421          01000    000000 00 1  122346


Q ss_pred             CCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeee
Q 044485          211 VLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       211 ~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      ++.++|++++++.++....   .+..+++.+|..++.
T Consensus       205 ~i~v~Dv~~~~~~~~~~~~---~~~~~ni~~~~~~s~  238 (306)
T PLN02725        205 FLHVDDLADAVVFLMRRYS---GAEHVNVGSGDEVTI  238 (306)
T ss_pred             cccHHHHHHHHHHHHhccc---cCcceEeCCCCcccH
Confidence            7899999999999886532   235568887766543

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.48  E-value=3.2e-12  Score=113.19  Aligned_cols=207  Identities=13%  Similarity=0.109  Sum_probs=130.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ..++||||||+|.||++++++|.++|++|++++|...........+..    ..++.++..|+.+..     +       
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~----~~~~~~~~~Di~~~~-----~-------  182 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG----NPRFELIRHDVVEPI-----L-------  182 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc----CCceEEEECcccccc-----c-------
Confidence            457899999999999999999999999999998864322111111111    123677888887642     1       


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------Hhhhcccc-----------------
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------LGVCGIIG-----------------  144 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------~s~~~~~~-----------------  144 (257)
                      .++|+|||+|+.....  . ..   ++....+++|+.++..+....         .|....++                 
T Consensus       183 ~~~D~ViHlAa~~~~~--~-~~---~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p  256 (436)
T PLN02166        183 LEVDQIYHLACPASPV--H-YK---YNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNP  256 (436)
T ss_pred             cCCCEEEECceeccch--h-hc---cCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCC
Confidence            2599999999865321  1 11   123577889999998885544         12222221                 


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH--------hHhhhhhccccC-cc--ccccCCCCC
Q 044485          145 GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK--------DFLKLADDGLGG-MY--SNLKGAVLE  213 (257)
Q Consensus       145 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~--------~~~~~~~~~~~~-~~--~~~~~~~~~  213 (257)
                      ......|+.+|.+.+.+++...+.   .|+++..+.|+.+..+...        .+.......... ..  ......++.
T Consensus       257 ~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~  333 (436)
T PLN02166        257 IGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQY  333 (436)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEE
Confidence            112346999999999999887655   4788888888877766421        111111000000 01  112235788


Q ss_pred             HHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          214 PEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       214 ~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .+|+++++..++...    .+..+++.+|..++
T Consensus       334 V~Dva~ai~~~~~~~----~~giyNIgs~~~~S  362 (436)
T PLN02166        334 VSDLVDGLVALMEGE----HVGPFNLGNPGEFT  362 (436)
T ss_pred             HHHHHHHHHHHHhcC----CCceEEeCCCCcEe
Confidence            999999999887532    23478887776544

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.48  E-value=1.2e-12  Score=110.95  Aligned_cols=201  Identities=20%  Similarity=0.206  Sum_probs=134.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      .|||||++|.||++++++|.++|++|+.++|.........          ..+.++.+|+++.+.+...++       ..
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~~~-------~~   64 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----------SGVEFVVLDLTDRDLVDELAK-------GV   64 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----------cccceeeecccchHHHHHHHh-------cC
Confidence            3999999999999999999999999999999776543222          126788899999855555544       23


Q ss_pred             -cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC------------CCC--
Q 044485           94 -DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG------------AAT--  148 (257)
Q Consensus        94 -d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~------------~~~--  148 (257)
                       |++||+|+......   ... . .....+.+|+.++.++.....          |..+..+.            +..  
T Consensus        65 ~d~vih~aa~~~~~~---~~~-~-~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~  139 (314)
T COG0451          65 PDAVIHLAAQSSVPD---SNA-S-DPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPL  139 (314)
T ss_pred             CCEEEEccccCchhh---hhh-h-CHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCC
Confidence             99999999765311   111 1 345688899999998865552          22111111            111  


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH----hhh-----hhcccc--Ccc--ccccCCCCCHH
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF----LKL-----ADDGLG--GMY--SNLKGAVLEPE  215 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~----~~~-----~~~~~~--~~~--~~~~~~~~~~~  215 (257)
                      ..|+.+|.+.+.+++....   ..|+.+..+.|+.+..|.....    ...     ......  ...  ......++..+
T Consensus       140 ~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  216 (314)
T COG0451         140 NPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVD  216 (314)
T ss_pred             CHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHH
Confidence            1499999999999999887   4689999999988776653321    000     011110  010  01112367799


Q ss_pred             HHHHHHHHhcCCCCCcccccEEEecCce
Q 044485          216 DAAEAALYLGSDESKCVSGHNLVVDGGF  243 (257)
Q Consensus       216 ~~a~~~~~l~s~~~~~~~G~~~~~dgG~  243 (257)
                      |+++++..++.....   + .+++.++.
T Consensus       217 D~a~~~~~~~~~~~~---~-~~ni~~~~  240 (314)
T COG0451         217 DVADALLLALENPDG---G-VFNIGSGT  240 (314)
T ss_pred             HHHHHHHHHHhCCCC---c-EEEeCCCC
Confidence            999999999876542   2 88888775

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.45  E-value=3.5e-12  Score=107.91  Aligned_cols=135  Identities=14%  Similarity=0.116  Sum_probs=95.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      ++|||||+|.||++++++|.++| +|+.++|...                    .+..|++|.+.++++++..     ++
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~--------------------~~~~Dl~d~~~~~~~~~~~-----~~   55 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST--------------------DYCGDFSNPEGVAETVRKI-----RP   55 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc--------------------cccCCCCCHHHHHHHHHhc-----CC
Confidence            69999999999999999999999 7888877531                    1247999999998877743     58


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------Hhhhcccc------------CCCCchhh
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------LGVCGIIG------------GAATHAYT  152 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------~s~~~~~~------------~~~~~~y~  152 (257)
                      |+|||+|+....      +...++....+.+|+.++.++....         +|.....+            ..+...|+
T Consensus        56 D~Vih~Aa~~~~------~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg  129 (299)
T PRK09987         56 DVIVNAAAHTAV------DKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYG  129 (299)
T ss_pred             CEEEECCccCCc------chhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCCCCCCCCCHHH
Confidence            999999997542      1112234566788999998886654         22222221            11234799


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccCh
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTP  187 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~  187 (257)
                      .+|.+.+.+++....       +...++|+++..|
T Consensus       130 ~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp  157 (299)
T PRK09987        130 ETKLAGEKALQEHCA-------KHLIFRTSWVYAG  157 (299)
T ss_pred             HHHHHHHHHHHHhCC-------CEEEEecceecCC
Confidence            999999999876432       2366777766654

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.45  E-value=1.3e-12  Score=107.58  Aligned_cols=148  Identities=20%  Similarity=0.254  Sum_probs=110.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +++||||||+|.||++.+.+|.++|+.|++++.-........+.++...++...+.++..|+.|.+.+++++++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            579999999999999999999999999999986443333333434333333456999999999999999999876     


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------Hhhhcccc------------CC-CC
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGIIG------------GA-AT  148 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~~------------~~-~~  148 (257)
                      .+|.|+|-|+.-.-      .-+.+.....+..|+.+++.+....          +|.+...+            .. +.
T Consensus        77 ~fd~V~Hfa~~~~v------geS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~  150 (343)
T KOG1371|consen   77 KFDAVMHFAALAAV------GESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPT  150 (343)
T ss_pred             CCceEEeehhhhcc------chhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCC
Confidence            59999999986432      1233445777888999999886554          33333332            22 45


Q ss_pred             chhhhhHHHHHHHHHHHHHHhc
Q 044485          149 HAYTSSKHGLLGLMKNTAVELG  170 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~  170 (257)
                      ..|+.+|.+++...+.....+.
T Consensus       151 ~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  151 NPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CcchhhhHHHHHHHHhhhcccc
Confidence            6899999999999998877653

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.43  E-value=1e-11  Score=115.89  Aligned_cols=209  Identities=17%  Similarity=0.133  Sum_probs=128.8

Q ss_pred             EEEEecCCCchHHHHHHHHH--HcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHH--HHHHHHHHHH
Q 044485           14 VALITGGARGIGECTARLFS--KHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDI--ENAVNTAVTQ   89 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~--~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v--~~~~~~~~~~   89 (257)
                      ++|||||+|.||++++++|+  ..|++|++++|+... ...........  ..++.++.+|++|++..  ...++++   
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~~l---   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWG--ADRVVPLVGDLTEPGLGLSEADIAEL---   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcC--CCcEEEEecccCCccCCcCHHHHHHh---
Confidence            79999999999999999999  579999999996532 22211111111  12488899999985321  1112222   


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhcccc--------------C
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIG--------------G  145 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~--------------~  145 (257)
                       .++|+|||+|+.....      .+   .....++|+.++..+.....          |..+..+              .
T Consensus        76 -~~~D~Vih~Aa~~~~~------~~---~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~  145 (657)
T PRK07201         76 -GDIDHVVHLAAIYDLT------AD---EEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQ  145 (657)
T ss_pred             -cCCCEEEECceeecCC------CC---HHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhc
Confidence             3799999999965321      12   24556788888887755441          2221111              1


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh----------Hhhhhhc--cccC---cc--cccc
Q 044485          146 AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD----------FLKLADD--GLGG---MY--SNLK  208 (257)
Q Consensus       146 ~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~----------~~~~~~~--~~~~---~~--~~~~  208 (257)
                      .....|+.+|...+.+++.      ..|+++..++|+.+..+....          .......  ....   ..  ....
T Consensus       146 ~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (657)
T PRK07201        146 GLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGR  219 (657)
T ss_pred             CCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCe
Confidence            1124699999999998863      258999999999887642100          0000000  0000   00  0011


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          209 GAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       209 ~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ..++..+++++++..++....  ..|+.+++.++..++
T Consensus       220 ~~~v~vddva~ai~~~~~~~~--~~g~~~ni~~~~~~s  255 (657)
T PRK07201        220 TNIVPVDYVADALDHLMHKDG--RDGQTFHLTDPKPQR  255 (657)
T ss_pred             eeeeeHHHHHHHHHHHhcCcC--CCCCEEEeCCCCCCc
Confidence            235678999999998876432  578999998876544

>PLN02996 fatty acyl-CoA reductase

Probab=99.42  E-value=3.4e-12  Score=114.66  Aligned_cols=213  Identities=16%  Similarity=0.139  Sum_probs=132.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC---eEEEeeCcchh---hHhHHHHh---------ccCCCC------CCCce
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA---KVLIADIKDDL---GESVCKDI---------GSSSSS------ASGCS   67 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~---~Vi~~~r~~~~---~~~~~~~~---------~~~~~~------~~~v~   67 (257)
                      -++||+++||||||.||..++..|++.+.   +|+++.|....   .+++..++         ....+.      ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            47899999999999999999999998653   47888886532   11211111         000000      13589


Q ss_pred             eEecCCCCH-------HHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----
Q 044485           68 YVHCDVTKE-------KDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----  136 (257)
Q Consensus        68 ~~~~D~~~~-------~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----  136 (257)
                      ++.+|++++       +.++.+++       .+|+|||+|+....     .    +.....+.+|+.++..+....    
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-----~----~~~~~~~~~Nv~gt~~ll~~a~~~~  151 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-----D----ERYDVALGINTLGALNVLNFAKKCV  151 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC-----c----CCHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999843       33444433       59999999997532     1    235678889999998775433    


Q ss_pred             -------HhhhccccC---------------------------------------------------------------C
Q 044485          137 -------LGVCGIIGG---------------------------------------------------------------A  146 (257)
Q Consensus       137 -------~s~~~~~~~---------------------------------------------------------------~  146 (257)
                             .|+....+.                                                               .
T Consensus       152 ~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (491)
T PLN02996        152 KVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHG  231 (491)
T ss_pred             CCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCC
Confidence                   122111110                                                               0


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh--------------hhccccCcc--ccccCC
Q 044485          147 ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL--------------ADDGLGGMY--SNLKGA  210 (257)
Q Consensus       147 ~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~--------------~~~~~~~~~--~~~~~~  210 (257)
                      ....|+.||++.|.+++..+     .|+.+..++|+.+..+...+...-              .......+.  ......
T Consensus       232 ~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D  306 (491)
T PLN02996        232 WPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLD  306 (491)
T ss_pred             CCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecc
Confidence            12359999999999996542     389999999998877643221100              000000011  122345


Q ss_pred             CCCHHHHHHHHHHhcCCCC-CcccccEEEecCc
Q 044485          211 VLEPEDAAEAALYLGSDES-KCVSGHNLVVDGG  242 (257)
Q Consensus       211 ~~~~~~~a~~~~~l~s~~~-~~~~G~~~~~dgG  242 (257)
                      ++.+++++++++.++.... ....++++++.+|
T Consensus       307 ~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        307 VIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             eecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            7889999999887765421 1124678898877

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.41  E-value=7.1e-12  Score=102.97  Aligned_cols=172  Identities=23%  Similarity=0.233  Sum_probs=120.0

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCcc
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLD   94 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~id   94 (257)
                      +||||++|.+|.++++.|. .+++|+.++|..                        +|++|++.+.+++++.     +||
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~------------------------~Ditd~~~v~~~i~~~-----~PD   52 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE------------------------LDITDPDAVLEVIRET-----RPD   52 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc------------------------ccccChHHHHHHHHhh-----CCC
Confidence            9999999999999999999 778999887664                        6999999999999886     699


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhh----cccc--------CCCCchhhh
Q 044485           95 IMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVC----GIIG--------GAATHAYTS  153 (257)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~----~~~~--------~~~~~~y~~  153 (257)
                      +|||+|++..-      +..+.+.+..+.+|..++.++.+...         |+.    |..+        ..+...|+.
T Consensus        53 vVIn~AAyt~v------D~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~  126 (281)
T COG1091          53 VVINAAAYTAV------DKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGR  126 (281)
T ss_pred             EEEECcccccc------ccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhH
Confidence            99999998642      22334468899999999999876652         211    1121        223457999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH----hhhhhcc-ccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF----LKLADDG-LGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      ||.+-|..+++..       -+...++..|+......++    .....+. .-.......+..+..+++|+.+..|+...
T Consensus       127 sKl~GE~~v~~~~-------~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~  199 (281)
T COG1091         127 SKLAGEEAVRAAG-------PRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKE  199 (281)
T ss_pred             HHHHHHHHHHHhC-------CCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhcc
Confidence            9999999998754       2334444445444322221    1111111 11111444566778999999999988765


Q ss_pred             C
Q 044485          229 S  229 (257)
Q Consensus       229 ~  229 (257)
                      .
T Consensus       200 ~  200 (281)
T COG1091         200 K  200 (281)
T ss_pred             c
Confidence            4

>PRK05865 hypothetical protein; Provisional

Probab=99.37  E-value=2.7e-11  Score=113.85  Aligned_cols=185  Identities=12%  Similarity=0.072  Sum_probs=121.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      +++||||+|+||++++++|+++|++|++++|+....      ..      ..+.++.+|++|.+++.++++       .+
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~~------~~v~~v~gDL~D~~~l~~al~-------~v   62 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------WP------SSADFIAADIRDATAVESAMT-------GA   62 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------cc------cCceEEEeeCCCHHHHHHHHh-------CC
Confidence            699999999999999999999999999999875321      11      127789999999999888775       58


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhhccccCCCCchhhhhHHHHHHHHHHHHHHhccCC
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG  173 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~g  173 (257)
                      |+|||+|+....               .+++|+.++.++...+... +.......++  .+|.+.+.+.+.       .|
T Consensus        63 D~VVHlAa~~~~---------------~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS--~~K~aaE~ll~~-------~g  117 (854)
T PRK05865         63 DVVAHCAWVRGR---------------NDHINIDGTANVLKAMAET-GTGRIVFTSS--GHQPRVEQMLAD-------CG  117 (854)
T ss_pred             CEEEECCCcccc---------------hHHHHHHHHHHHHHHHHHc-CCCeEEEECC--cHHHHHHHHHHH-------cC
Confidence            999999985321               3567888888776554321 1000000111  128777766632       48


Q ss_pred             cEEEeecCCCccChhhHhHhhhhhccccCcc--c--cccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMY--S--NLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       174 i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +.+..+.|+.+..+....+......  ....  .  .....++..+|++++++.++....  ..|..+++.+|..++
T Consensus       118 l~~vILRp~~VYGP~~~~~i~~ll~--~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~--~~ggvyNIgsg~~~S  190 (854)
T PRK05865        118 LEWVAVRCALIFGRNVDNWVQRLFA--LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTV--IDSGPVNLAAPGELT  190 (854)
T ss_pred             CCEEEEEeceEeCCChHHHHHHHhc--CceeccCCCCceEeeeeHHHHHHHHHHHHhCCC--cCCCeEEEECCCccc
Confidence            9999999999987753222111000  0011  1  111236889999999998875321  235678888776543

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.36  E-value=4.5e-12  Score=106.47  Aligned_cols=192  Identities=16%  Similarity=0.107  Sum_probs=116.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +++||||++|.||.++.+.|.++|++|+.++|.                        .+|++|.+++.+++++.     +
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------------~~dl~d~~~~~~~~~~~-----~   51 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS------------------------DLDLTDPEAVAKLLEAF-----K   51 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------------CS-TTSHHHHHHHHHHH------
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------------hcCCCCHHHHHHHHHHh-----C
Confidence            489999999999999999999999999998776                        26999999999998876     5


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccc-c-----------CCCCchh
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGII-G-----------GAATHAY  151 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~-~-----------~~~~~~y  151 (257)
                      +|+|||||+....      +...++.+..+.+|+.++..+.+...         |+.... +           ..+...|
T Consensus        52 pd~Vin~aa~~~~------~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~Y  125 (286)
T PF04321_consen   52 PDVVINCAAYTNV------DACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVY  125 (286)
T ss_dssp             -SEEEE------H------HHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHH
T ss_pred             CCeEeccceeecH------HhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCCCHH
Confidence            9999999997532      22344567889999999999876552         222111 1           1223579


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhh----HhHhhhhhc-cccCccccccCCCCCHHHHHHHHHHhcC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA----KDFLKLADD-GLGGMYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      +.+|...|..++...       -....++++++..+..    ......... ..-..........+..+|+|+.+..++.
T Consensus       126 G~~K~~~E~~v~~~~-------~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~  198 (286)
T PF04321_consen  126 GRSKLEGEQAVRAAC-------PNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIE  198 (286)
T ss_dssp             HHHHHHHHHHHHHH--------SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhc-------CCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHH
Confidence            999999999988722       1556667766655522    111111110 0001112223345679999999999987


Q ss_pred             CCC-CcccccEEEecCceeee
Q 044485          227 DES-KCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       227 ~~~-~~~~G~~~~~dgG~~~~  246 (257)
                      ... ..-.+.++.+.|...++
T Consensus       199 ~~~~~~~~~Giyh~~~~~~~S  219 (286)
T PF04321_consen  199 KNLSGASPWGIYHLSGPERVS  219 (286)
T ss_dssp             HHHH-GGG-EEEE---BS-EE
T ss_pred             hcccccccceeEEEecCcccC
Confidence            652 12235567777665544

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.35  E-value=1.2e-11  Score=99.86  Aligned_cols=205  Identities=18%  Similarity=0.127  Sum_probs=143.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh--hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL--GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +|++||||-||.=|..+|+.|.++|+.|+...|+...  .... .....-.....+++.+.+|++|..++.++++++   
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc-eeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            5899999999999999999999999999999887432  2221 111111111234889999999999999999887   


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------Hhhh---------ccccC
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVC---------GIIGG  145 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~---------~~~~~  145 (257)
                        .||-|.|.|+      +++...+.+......+++..|+..+...+               +.+.         ...|+
T Consensus        78 --~PdEIYNLaA------QS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPF  149 (345)
T COG1089          78 --QPDEIYNLAA------QSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPF  149 (345)
T ss_pred             --Cchhheeccc------cccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCC
Confidence              6999999998      44556667777888888999998875544               1111         22345


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhc---cCCcEEEeecCCCccChhhHhH----hhhhhccccCcc---ccccCCCCCHH
Q 044485          146 AATHAYTSSKHGLLGLMKNTAVELG---RFGIRVNCVSPYAVSTPLAKDF----LKLADDGLGGMY---SNLKGAVLEPE  215 (257)
Q Consensus       146 ~~~~~y~~sK~a~~~~~~~l~~e~~---~~gi~v~~i~pg~v~t~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~~  215 (257)
                      .+.++|+++|..-.-++...+..|.   -.||-+|.=+|.==.|-.++++    ........+...   -...+.|+.+.
T Consensus       150 yPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~  229 (345)
T COG1089         150 YPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAK  229 (345)
T ss_pred             CCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchH
Confidence            6667999999998888887777663   4688888877753333333333    222222222222   23346789999


Q ss_pred             HHHHHHHHhcCCC
Q 044485          216 DAAEAALYLGSDE  228 (257)
Q Consensus       216 ~~a~~~~~l~s~~  228 (257)
                      |.+++.|.++..+
T Consensus       230 DYVe~mwlmLQq~  242 (345)
T COG1089         230 DYVEAMWLMLQQE  242 (345)
T ss_pred             HHHHHHHHHHccC
Confidence            9999999888665

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.30  E-value=5.2e-11  Score=92.63  Aligned_cols=171  Identities=12%  Similarity=0.104  Sum_probs=113.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      ++++||||+ |+|.+++++|+++|++|++++|+.+..+++...+..    ..++.++.+|++|+++++++++...+.+++
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~----~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~   75 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT----PESITPLPLDYHDDDALKLAIKSTIEKNGP   75 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc----CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            369999998 677789999999999999999998776666554532    124788999999999999999999998899


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhh-ch-hhhHHHHHHHhhhccccCCCCchhhhhHHHHHHHHHHHHHHhc
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSIN-LV-GAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG  170 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n-~~-~~~~l~~~~~s~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~  170 (257)
                      +|++|+..-...+          +.+....+-+ +. .++.+.+++.|..                +-   .+..+....
T Consensus        76 id~lv~~vh~~~~----------~~~~~~~~~~gv~~~~~~~~h~~gs~~----------------~~---~~~~~~~~~  126 (177)
T PRK08309         76 FDLAVAWIHSSAK----------DALSVVCRELDGSSETYRLFHVLGSAA----------------SD---PRIPSEKIG  126 (177)
T ss_pred             CeEEEEeccccch----------hhHHHHHHHHccCCCCceEEEEeCCcC----------------Cc---hhhhhhhhh
Confidence            9999998865432          1122221111 11 0111222221111                00   022333344


Q ss_pred             cCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC-CCcccccE
Q 044485          171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE-SKCVSGHN  236 (257)
Q Consensus       171 ~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~-~~~~~G~~  236 (257)
                      ..++...-|..|++-++-                   ..||.+=+|+++.++.....+ +.++.|+.
T Consensus       127 ~~~~~~~~i~lgf~~~~~-------------------~~rwlt~~ei~~gv~~~~~~~~~~~~~g~~  174 (177)
T PRK08309        127 PARCSYRRVILGFVLEDT-------------------YSRWLTHEEISDGVIKAIESDADEHVVGTV  174 (177)
T ss_pred             hcCCceEEEEEeEEEeCC-------------------ccccCchHHHHHHHHHHHhcCCCeEEEEEe
Confidence            455666777788776542                   347889999999998877554 44566653

>PLN02778 3,5-epimerase/4-reductase

Probab=99.29  E-value=1.9e-10  Score=97.16  Aligned_cols=187  Identities=15%  Similarity=0.169  Sum_probs=111.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +++|||||+|.||++++++|.++|++|+...                           .|+.+.+.+...++..     +
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~---------------------------~~~~~~~~v~~~l~~~-----~   57 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS---------------------------GRLENRASLEADIDAV-----K   57 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec---------------------------CccCCHHHHHHHHHhc-----C
Confidence            7899999999999999999999999986421                           2344555555544432     6


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------Hhhhcccc-------------------
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------LGVCGIIG-------------------  144 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------~s~~~~~~-------------------  144 (257)
                      +|+|||+|+.....   ..+...++....+++|+.++.++....         .+.....+                   
T Consensus        58 ~D~ViH~Aa~~~~~---~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p  134 (298)
T PLN02778         58 PTHVFNAAGVTGRP---NVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTP  134 (298)
T ss_pred             CCEEEECCcccCCC---CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCCCC
Confidence            99999999976421   111223445778899999999885544         11111110                   


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEe-ecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHH
Q 044485          145 GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNC-VSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       145 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~-i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  223 (257)
                      .+....|+.+|.+.+.+++.....   .++|+.. +.++...   ...+....... ...... ...+...+|++++++.
T Consensus       135 ~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~~~~~~~~~~~---~~~fi~~~~~~-~~~~~~-~~s~~yv~D~v~al~~  206 (298)
T PLN02778        135 NFTGSFYSKTKAMVEELLKNYENV---CTLRVRMPISSDLSN---PRNFITKITRY-EKVVNI-PNSMTILDELLPISIE  206 (298)
T ss_pred             CCCCCchHHHHHHHHHHHHHhhcc---EEeeecccCCccccc---HHHHHHHHHcC-CCeeEc-CCCCEEHHHHHHHHHH
Confidence            011247999999999999876532   3455522 1222111   01111111000 001111 1236678999999998


Q ss_pred             hcCCCCCcccccEEEecCceeee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ++...   ..| .+++.+|..++
T Consensus       207 ~l~~~---~~g-~yNigs~~~iS  225 (298)
T PLN02778        207 MAKRN---LTG-IYNFTNPGVVS  225 (298)
T ss_pred             HHhCC---CCC-eEEeCCCCccc
Confidence            87543   234 88897776554

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.28  E-value=7.4e-11  Score=92.40  Aligned_cols=171  Identities=16%  Similarity=0.166  Sum_probs=106.6

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCcc
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLD   94 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~id   94 (257)
                      |+|+||||.+|+.+++.|.++|++|+++.|++++.++      .     .++.++.+|+.|++++.+.++       +.|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~------~-----~~~~~~~~d~~d~~~~~~al~-------~~d   62 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED------S-----PGVEIIQGDLFDPDSVKAALK-------GAD   62 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH------C-----TTEEEEESCTTCHHHHHHHHT-------TSS
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc------c-----cccccceeeehhhhhhhhhhh-------hcc
Confidence            7999999999999999999999999999999887665      1     238999999999988887776       699


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHH-HHhhhccccCCCC----------chhhhhHHHHHHHHH
Q 044485           95 IMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNM-LLGVCGIIGGAAT----------HAYTSSKHGLLGLMK  163 (257)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~-~~s~~~~~~~~~~----------~~y~~sK~a~~~~~~  163 (257)
                      .+|+++|....      +  .+.....++.--..  ...+. +.|..+.......          ..|...|...+.+. 
T Consensus        63 ~vi~~~~~~~~------~--~~~~~~~~~a~~~~--~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-  131 (183)
T PF13460_consen   63 AVIHAAGPPPK------D--VDAAKNIIEAAKKA--GVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEAL-  131 (183)
T ss_dssp             EEEECCHSTTT------H--HHHHHHHHHHHHHT--TSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHH-
T ss_pred             hhhhhhhhhcc------c--cccccccccccccc--ccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHH-
Confidence            99999975422      1  11111111110000  00000 1122222221111          24555555544443 


Q ss_pred             HHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcC
Q 044485          164 NTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       164 ~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                            .+.+++...++|+++..+....     ...... ........++.+|+|+.++.++.
T Consensus       132 ------~~~~~~~~ivrp~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  132 ------RESGLNWTIVRPGWIYGNPSRS-----YRLIKE-GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             ------HHSTSEEEEEEESEEEBTTSSS-----EEEESS-TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             ------HhcCCCEEEEECcEeEeCCCcc-----eeEEec-cCCCCcCcCCHHHHHHHHHHHhC
Confidence                  2358999999999987765221     011100 11111246789999999988763

...

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.28  E-value=2e-10  Score=96.43  Aligned_cols=200  Identities=18%  Similarity=0.101  Sum_probs=112.5

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCcc
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLD   94 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~id   94 (257)
                      +|||||+|.||.++++.|+++|++|++++|+.+.......           ..  ..|... ...       .+....+|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~--~~~~~~-~~~-------~~~~~~~D   59 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----------EG--YKPWAP-LAE-------SEALEGAD   59 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----------ee--eecccc-cch-------hhhcCCCC
Confidence            6899999999999999999999999999998765432110           00  112211 111       22334799


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH------------hhhccccCCC------------Cch
Q 044485           95 IMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL------------GVCGIIGGAA------------THA  150 (257)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~------------s~~~~~~~~~------------~~~  150 (257)
                      +|||+|+....    ......+.....++.|+.++..+...+.            |..+..+...            ...
T Consensus        60 ~Vvh~a~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~  135 (292)
T TIGR01777        60 AVINLAGEPIA----DKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDF  135 (292)
T ss_pred             EEEECCCCCcc----cccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCCh
Confidence            99999996432    1123344556677889888887754431            1111122110            001


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH---hHhhhhhccccCcc--ccccCCCCCHHHHHHHHHHhc
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK---DFLKLADDGLGGMY--SNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~l~  225 (257)
                      |...+...+...+    ...+.++.+..++|+.+..+...   ..............  ......++..+|+++.+..++
T Consensus       136 ~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l  211 (292)
T TIGR01777       136 LAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFAL  211 (292)
T ss_pred             HHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHh
Confidence            2222222222222    22345899999999998776321   11100000000101  122235788999999999988


Q ss_pred             CCCCCcccccEEEecCceeee
Q 044485          226 SDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       226 s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ....  ..| .+++-++..++
T Consensus       212 ~~~~--~~g-~~~~~~~~~~s  229 (292)
T TIGR01777       212 ENAS--ISG-PVNATAPEPVR  229 (292)
T ss_pred             cCcc--cCC-ceEecCCCccC
Confidence            6532  234 57776665443

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.27  E-value=4.4e-11  Score=98.50  Aligned_cols=155  Identities=15%  Similarity=0.168  Sum_probs=90.7

Q ss_pred             EecCCCchHHHHHHHHHHcCC--eEEEeeCcchh---hHhHHHHhccCCC-------CCCCceeEecCCCCHHH--HHHH
Q 044485           17 ITGGARGIGECTARLFSKHGA--KVLIADIKDDL---GESVCKDIGSSSS-------SASGCSYVHCDVTKEKD--IENA   82 (257)
Q Consensus        17 ItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~---~~~~~~~~~~~~~-------~~~~v~~~~~D~~~~~~--v~~~   82 (257)
                      ||||||.||.++.++|++.+.  +|+++.|....   .+++.+.+.....       ...+++++.+|++++.-  -+..
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999997632   3334333322110       13469999999998651  1122


Q ss_pred             HHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC-------
Q 044485           83 VNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG-------  145 (257)
Q Consensus        83 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~-------  145 (257)
                      ++++.+   .+|+|||||+.....         ..+....++|+.|+..+.+...          |.....+.       
T Consensus        81 ~~~L~~---~v~~IiH~Aa~v~~~---------~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~  148 (249)
T PF07993_consen   81 YQELAE---EVDVIIHCAASVNFN---------APYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEE  148 (249)
T ss_dssp             HHHHHH---H--EEEE--SS-SBS----------S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--S
T ss_pred             hhcccc---ccceeeecchhhhhc---------ccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccc
Confidence            333333   499999999976431         1245577889999998865551          22111111       


Q ss_pred             --------------CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccC
Q 044485          146 --------------AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVST  186 (257)
Q Consensus       146 --------------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t  186 (257)
                                    .....|..||..-|.+++..+++   .|+.+..++||.+-.
T Consensus       149 ~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  149 KVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVG  200 (249)
T ss_dssp             SS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-
T ss_pred             cccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCcccc
Confidence                          11237999999999999988765   488999999997755

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.27  E-value=8e-11  Score=100.10  Aligned_cols=216  Identities=14%  Similarity=0.109  Sum_probs=135.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcC--CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHG--AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +..++|||||+|.+|++++++|.+++  ..+.+++.......--.++....   ..++..+.+|+.|..++...++    
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~---~~~v~~~~~D~~~~~~i~~a~~----   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFR---SGRVTVILGDLLDANSISNAFQ----   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhccc---CCceeEEecchhhhhhhhhhcc----
Confidence            35799999999999999999999998  77999988764211111111111   1348889999999998888776    


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------Hhhh-------------ccccC
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVC-------------GIIGG  145 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~-------------~~~~~  145 (257)
                         ++ .+||+|+...+      .....+.+..+++|+.|+.++....          .|..             ...+.
T Consensus        76 ---~~-~Vvh~aa~~~~------~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~  145 (361)
T KOG1430|consen   76 ---GA-VVVHCAASPVP------DFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPY  145 (361)
T ss_pred             ---Cc-eEEEeccccCc------cccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCC
Confidence               56 78888775432      2222246788899999987764433          1111             11223


Q ss_pred             CCC--chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh-ccccCcc----c--cccCCCCCHHH
Q 044485          146 AAT--HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD-DGLGGMY----S--NLKGAVLEPED  216 (257)
Q Consensus       146 ~~~--~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-~~~~~~~----~--~~~~~~~~~~~  216 (257)
                      +..  ..|+.||+--|.+++....   ..+...++++|..+..|..+....... ......+    .  ..+..+...+-
T Consensus       146 p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~N  222 (361)
T KOG1430|consen  146 PLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGEN  222 (361)
T ss_pred             ccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEech
Confidence            322  3899999999999988665   457889999998888876544322211 1111111    1  11122333333


Q ss_pred             HHHHHH---HhcCCCCCcccccEEEecCceeee
Q 044485          217 AAEAAL---YLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       217 ~a~~~~---~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ++.+.+   ..+......++||.+.+..|....
T Consensus       223 va~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~  255 (361)
T KOG1430|consen  223 VAWAHILAARALLDKSPSVNGQFYFITDDTPVR  255 (361)
T ss_pred             hHHHHHHHHHHHHhcCCccCceEEEEeCCCcch
Confidence            333321   111224556899999999987543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.26  E-value=2.6e-11  Score=98.13  Aligned_cols=96  Identities=15%  Similarity=0.169  Sum_probs=75.3

Q ss_pred             cEEEEecC-CCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGG-ARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGa-s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      .+=.||.. |||||+++|++|+++|++|+++++...        +..       .....+|+++.++++++++++.+.++
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~-------~~~~~~Dv~d~~s~~~l~~~v~~~~g   79 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP-------EPHPNLSIREIETTKDLLITLKELVQ   79 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc-------ccCCcceeecHHHHHHHHHHHHHHcC
Confidence            34455555 689999999999999999999876311        100       00135899999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhh
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN  125 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n  125 (257)
                      ++|++|||||+...  .++.+.+.++|.+++..|
T Consensus        80 ~iDiLVnnAgv~d~--~~~~~~s~e~~~~~~~~~  111 (227)
T TIGR02114        80 EHDILIHSMAVSDY--TPVYMTDLEQVQASDNLN  111 (227)
T ss_pred             CCCEEEECCEeccc--cchhhCCHHHHhhhcchh
Confidence            99999999997643  678889999999886554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.15  E-value=2.8e-09  Score=88.54  Aligned_cols=169  Identities=12%  Similarity=0.070  Sum_probs=131.5

Q ss_pred             CcEEEEecC-CCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           12 GKVALITGG-ARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        12 ~k~~lItGa-s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ..+|+|.|. +.-|++.+|.-|-++|+-|+++..+.+.......+-      ..++.....|..++.++...+.++.+..
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~------~~dI~~L~ld~~~~~~~~~~l~~f~~~L   76 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED------RPDIRPLWLDDSDPSSIHASLSRFASLL   76 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc------CCCCCCcccCCCCCcchHHHHHHHHHHh
Confidence            368899995 799999999999999999999998876644443332      1237888889988888888888887665


Q ss_pred             C--------------CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhhcc--------------
Q 044485           91 G--------------KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGI--------------  142 (257)
Q Consensus        91 ~--------------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~~~--------------  142 (257)
                      .              .+..||....... ...++...+.+.|.+.++.|+..++...+.++++...              
T Consensus        77 ~~p~~p~~~~~~h~l~L~svi~~Psl~y-p~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Ps  155 (299)
T PF08643_consen   77 SRPHVPFPGAPPHHLQLKSVIFIPSLSY-PTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPS  155 (299)
T ss_pred             cCCCCCCCCCCCceeEEEEEEEecCCCC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCc
Confidence            4              2455555544433 3378999999999999999999999888888654433              


Q ss_pred             ----ccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccCh
Q 044485          143 ----IGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTP  187 (257)
Q Consensus       143 ----~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~  187 (257)
                          ...+....-....+++.+|++.|++|++++||.|..+..|.++-.
T Consensus       156 i~ssl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  156 ISSSLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             hhhccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence                223334466778899999999999999999999999999887665

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.14  E-value=1e-09  Score=92.76  Aligned_cols=159  Identities=18%  Similarity=0.167  Sum_probs=105.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchh---hHhHHHHhcc----CCCCCCCceeEecCCCCHHH--HHHH
Q 044485           13 KVALITGGARGIGECTARLFSKH-GAKVLIADIKDDL---GESVCKDIGS----SSSSASGCSYVHCDVTKEKD--IENA   82 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~---~~~~~~~~~~----~~~~~~~v~~~~~D~~~~~~--v~~~   82 (257)
                      +++++|||||.+|..+.++|..+ .++|++.-|-++.   .+++.+..+.    ......+|.++..|++.++-  =+.-
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            57999999999999999999887 4789999886642   2233222220    11224569999999985432  1111


Q ss_pred             HHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccc---------
Q 044485           83 VNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGII---------  143 (257)
Q Consensus        83 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~---------  143 (257)
                      .+++.   ..+|.||||++.+.-.         ..+.+....|+.|+..+.+...          |..+..         
T Consensus        81 ~~~La---~~vD~I~H~gA~Vn~v---------~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~  148 (382)
T COG3320          81 WQELA---ENVDLIIHNAALVNHV---------FPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFT  148 (382)
T ss_pred             HHHHh---hhcceEEecchhhccc---------CcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCc
Confidence            22222   3699999999976521         1146677788888888765542          111111         


Q ss_pred             ------------cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccCh
Q 044485          144 ------------GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTP  187 (257)
Q Consensus       144 ------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~  187 (257)
                                  .......|+.||.+.|.++|....    .|+++..+.||.+-.+
T Consensus       149 ~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~I~gd  200 (382)
T COG3320         149 VDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGYITGD  200 (382)
T ss_pred             cccccccccccccCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCeeecc
Confidence                        011124799999999999987664    4999999999988443

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.14  E-value=4.1e-10  Score=94.52  Aligned_cols=196  Identities=14%  Similarity=0.159  Sum_probs=110.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC-
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK-   92 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~-   92 (257)
                      +++||||||.+|++++++|.++|++|.+..|+.+....            ..+..+.+|+.|++++..+++.. +...+ 
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~------------~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~   67 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG------------PNEKHVKFDWLDEDTWDNPFSSD-DGMEPE   67 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC------------CCCccccccCCCHHHHHHHHhcc-cCcCCc
Confidence            48999999999999999999999999999999764311            11556789999999999888643 22335 


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-HhhhccccCCCCchhhhhHHHHHHHHHHHHHHhcc
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR  171 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-~s~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~  171 (257)
                      +|.++++++....      .  .+.....++.-...  .+.+.+ +|..+...  .    ...+...+.+.+.      .
T Consensus        68 ~d~v~~~~~~~~~------~--~~~~~~~i~aa~~~--gv~~~V~~Ss~~~~~--~----~~~~~~~~~~l~~------~  125 (285)
T TIGR03649        68 ISAVYLVAPPIPD------L--APPMIKFIDFARSK--GVRRFVLLSASIIEK--G----GPAMGQVHAHLDS------L  125 (285)
T ss_pred             eeEEEEeCCCCCC------h--hHHHHHHHHHHHHc--CCCEEEEeeccccCC--C----CchHHHHHHHHHh------c
Confidence            9999998864211      0  11111111110000  000000 12111111  0    1233333332222      1


Q ss_pred             CCcEEEeecCCCccChhhHhHh-h-hhhcc-ccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          172 FGIRVNCVSPYAVSTPLAKDFL-K-LADDG-LGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       172 ~gi~v~~i~pg~v~t~~~~~~~-~-~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .|+..+.++|+++..+...... . ..... ...........+++++|+|++++.++.+..  ..|..+++-|+..++
T Consensus       126 ~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~--~~~~~~~l~g~~~~s  201 (285)
T TIGR03649       126 GGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKV--APNTDYVVLGPELLT  201 (285)
T ss_pred             cCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCC--cCCCeEEeeCCccCC
Confidence            4899999999987654421110 0 00000 000001222347899999999999887643  236667777765544

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.13  E-value=6.7e-10  Score=89.85  Aligned_cols=192  Identities=24%  Similarity=0.219  Sum_probs=111.7

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCcc
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLD   94 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~id   94 (257)
                      |+||||||-||++++.+|.+.|..|+++.|+.+..+...             +..   +..-+.+....    .  .++|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~-------------~~~---v~~~~~~~~~~----~--~~~D   58 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL-------------HPN---VTLWEGLADAL----T--LGID   58 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc-------------Ccc---ccccchhhhcc----c--CCCC
Confidence            589999999999999999999999999999986532221             100   00111111111    1  1699


Q ss_pred             EEEeCCCCCCCCCCCCCC-CCHHHHHHHHhhhchhhhHHHHHHH------------hhhccccCCCCchhhh----hHHH
Q 044485           95 IMFNNAGTVDEVKPNILD-NDQAEFERILSINLVGAFLGRNMLL------------GVCGIIGGAATHAYTS----SKHG  157 (257)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~------------s~~~~~~~~~~~~y~~----sK~a  157 (257)
                      ++||.||..-.     .. .+.+.-+..++.-+.++-.+...+.            |-.|.++......|.-    ..-.
T Consensus        59 avINLAG~~I~-----~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~F  133 (297)
T COG1090          59 AVINLAGEPIA-----ERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDF  133 (297)
T ss_pred             EEEECCCCccc-----cccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCCh
Confidence            99999996432     12 3444455555544444444444332            2333444333222221    2334


Q ss_pred             HHHHHHHHHHHh---ccCCcEEEeecCCCccCh---hhHhHhhhhhccccCcc--ccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          158 LLGLMKNTAVEL---GRFGIRVNCVSPYAVSTP---LAKDFLKLADDGLGGMY--SNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       158 ~~~~~~~l~~e~---~~~gi~v~~i~pg~v~t~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      +..+++.+-.+-   ...|+|++.+.-|.|-++   ................+  ...+-.|+..||.++.+.|++.+..
T Consensus       134 la~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~  213 (297)
T COG1090         134 LAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQ  213 (297)
T ss_pred             HHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcC
Confidence            555665544443   346999999999988553   22333222333333333  2222347899999999999998754


Q ss_pred             Cccccc
Q 044485          230 KCVSGH  235 (257)
Q Consensus       230 ~~~~G~  235 (257)
                        ++|.
T Consensus       214 --lsGp  217 (297)
T COG1090         214 --LSGP  217 (297)
T ss_pred             --CCCc
Confidence              5554

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.11  E-value=7.1e-09  Score=104.50  Aligned_cols=217  Identities=17%  Similarity=0.093  Sum_probs=128.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcC----CeEEEeeCcchhhH---hHHHHhccC----CCCCCCceeEecCCCCHHHH-
Q 044485           12 GKVALITGGARGIGECTARLFSKHG----AKVLIADIKDDLGE---SVCKDIGSS----SSSASGCSYVHCDVTKEKDI-   79 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g----~~Vi~~~r~~~~~~---~~~~~~~~~----~~~~~~v~~~~~D~~~~~~v-   79 (257)
                      .++++|||++|.||.++++.|++++    .+|+++.|......   ...+.....    .....++.++.+|++++.-. 
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5789999999999999999999987    77999998754322   222211110    00012488899999865211 


Q ss_pred             -HHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhcccc----
Q 044485           80 -ENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIG----  144 (257)
Q Consensus        80 -~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~----  144 (257)
                       ...++++.   ..+|++||||+....      ..+   +......|+.++..+.....          |..+..+    
T Consensus      1051 ~~~~~~~l~---~~~d~iiH~Aa~~~~------~~~---~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~ 1118 (1389)
T TIGR03443      1051 SDEKWSDLT---NEVDVIIHNGALVHW------VYP---YSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYY 1118 (1389)
T ss_pred             CHHHHHHHH---hcCCEEEECCcEecC------ccC---HHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccc
Confidence             11122222   369999999996532      122   23344568888887755441          1111110    


Q ss_pred             --------------C-----------CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH------h
Q 044485          145 --------------G-----------AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF------L  193 (257)
Q Consensus       145 --------------~-----------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~------~  193 (257)
                                    .           .....|+.||.+.+.+++....    .|+++..++||.+..+.....      .
T Consensus      1119 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~ 1194 (1389)
T TIGR03443      1119 VNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGATNTDDFL 1194 (1389)
T ss_pred             cchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCCCchhHH
Confidence                          0           0123599999999999876432    489999999999866532110      0


Q ss_pred             h-hhh-c-cccCcc-ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCcee
Q 044485          194 K-LAD-D-GLGGMY-SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       194 ~-~~~-~-~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~  244 (257)
                      . ... . ...... ......+++.++++++++.++........+..+.+.++..
T Consensus      1195 ~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~ 1249 (1389)
T TIGR03443      1195 LRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPR 1249 (1389)
T ss_pred             HHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCC
Confidence            0 000 0 000000 0112346789999999998876442222345677766643

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.08  E-value=2.9e-09  Score=97.22  Aligned_cols=112  Identities=17%  Similarity=0.179  Sum_probs=76.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC---eEEEeeCcchh---hHhHHHHh---------ccCCCC------CCCce
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA---KVLIADIKDDL---GESVCKDI---------GSSSSS------ASGCS   67 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~---~Vi~~~r~~~~---~~~~~~~~---------~~~~~~------~~~v~   67 (257)
                      -+++|+++||||||.||..++.+|++.+.   +|+++.|....   .++..+++         ++..+.      ..++.
T Consensus       116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            36899999999999999999999998764   57888885432   22222222         111111      24688


Q ss_pred             eEecCCCCHH------HHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH
Q 044485           68 YVHCDVTKEK------DIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML  136 (257)
Q Consensus        68 ~~~~D~~~~~------~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  136 (257)
                      .+.+|+++++      ..+.+.+       .+|+|||+|+....     .    +.+...+++|+.++.++....
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-----~----~~~~~a~~vNV~GT~nLLelA  254 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-----D----ERYDVAIDINTRGPCHLMSFA  254 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-----c----cCHHHHHHHHHHHHHHHHHHH
Confidence            9999999873      2332222       59999999997532     1    335778888999998875543

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.07  E-value=7.5e-10  Score=90.18  Aligned_cols=198  Identities=13%  Similarity=0.150  Sum_probs=115.3

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCcc
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLD   94 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~id   94 (257)
                      |+|+||+|.+|+.+++.|.+.++.|.++.|+.+.  +..++++..+     +.++.+|+.|++++.++++       ++|
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g-----~~vv~~d~~~~~~l~~al~-------g~d   66 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALG-----AEVVEADYDDPESLVAALK-------GVD   66 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTT-----TEEEES-TT-HHHHHHHHT-------TCS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhccc-----ceEeecccCCHHHHHHHHc-------CCc
Confidence            6899999999999999999999999999998742  2223333332     6788999999999988876       799


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-HhhhccccCC--C--CchhhhhHHHHHHHHHHHHHHh
Q 044485           95 IMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-LGVCGIIGGA--A--THAYTSSKHGLLGLMKNTAVEL  169 (257)
Q Consensus        95 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-~s~~~~~~~~--~--~~~y~~sK~a~~~~~~~l~~e~  169 (257)
                      .+|++.+...       ....+.....++.-...-  +.+.+ ++........  .  ...+-..|..++.+.+.     
T Consensus        67 ~v~~~~~~~~-------~~~~~~~~~li~Aa~~ag--Vk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~-----  132 (233)
T PF05368_consen   67 AVFSVTPPSH-------PSELEQQKNLIDAAKAAG--VKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEEYLRE-----  132 (233)
T ss_dssp             EEEEESSCSC-------CCHHHHHHHHHHHHHHHT---SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHHHHHH-----
T ss_pred             eEEeecCcch-------hhhhhhhhhHHHhhhccc--cceEEEEEecccccccccccccchhhhhhhhhhhhhhh-----
Confidence            9999888542       112222222222222111  11111 1221111110  0  11222356666555544     


Q ss_pred             ccCCcEEEeecCCCccChhhHhHhhhhhccccC---cccccc---CCC-CCHHHHHHHHHHhcCCCCCcccccEEEecCc
Q 044485          170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGG---MYSNLK---GAV-LEPEDAAEAALYLGSDESKCVSGHNLVVDGG  242 (257)
Q Consensus       170 ~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~---~~~~~~---~~~-~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG  242 (257)
                        .++..+.|.||++..................   .+..+.   ..+ .+.+|+++.+..++.+...+-.|..+.+.|.
T Consensus       133 --~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~~  210 (233)
T PF05368_consen  133 --SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAGE  210 (233)
T ss_dssp             --CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGGG
T ss_pred             --ccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCCC
Confidence              3899999999987665543332211111110   111111   123 3889999999999988554447888888663

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PLN00016 RNA-binding protein; Provisional

Probab=99.05  E-value=3.2e-09  Score=92.81  Aligned_cols=201  Identities=15%  Similarity=0.203  Sum_probs=114.2

Q ss_pred             cCCcEEEEe----cCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHH-------HHhccCCCCCCCceeEecCCCCHHH
Q 044485           10 LQGKVALIT----GGARGIGECTARLFSKHGAKVLIADIKDDLGESVC-------KDIGSSSSSASGCSYVHCDVTKEKD   78 (257)
Q Consensus        10 ~~~k~~lIt----Gas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~-------~~~~~~~~~~~~v~~~~~D~~~~~~   78 (257)
                      ...++||||    ||+|.||.+++++|.++|++|++++|+........       .++..     ..+.++.+|+.|   
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-----~~v~~v~~D~~d---  121 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS-----AGVKTVWGDPAD---  121 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh-----cCceEEEecHHH---
Confidence            344789999    99999999999999999999999999875432221       11111     127788888876   


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHH-HHhhhccccCCC---------C
Q 044485           79 IENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNM-LLGVCGIIGGAA---------T  148 (257)
Q Consensus        79 v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~-~~s~~~~~~~~~---------~  148 (257)
                      +..++.     ..++|+|||+++..           .+.....++.-...-  +.+. +.|..+..+...         .
T Consensus       122 ~~~~~~-----~~~~d~Vi~~~~~~-----------~~~~~~ll~aa~~~g--vkr~V~~SS~~vyg~~~~~p~~E~~~~  183 (378)
T PLN00016        122 VKSKVA-----GAGFDVVYDNNGKD-----------LDEVEPVADWAKSPG--LKQFLFCSSAGVYKKSDEPPHVEGDAV  183 (378)
T ss_pred             HHhhhc-----cCCccEEEeCCCCC-----------HHHHHHHHHHHHHcC--CCEEEEEccHhhcCCCCCCCCCCCCcC
Confidence            333321     13699999997621           111222222110000  1011 122222222111         0


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh-----Hhhhhhcccc-Ccc--ccccCCCCCHHHHHHH
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD-----FLKLADDGLG-GMY--SNLKGAVLEPEDAAEA  220 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~-----~~~~~~~~~~-~~~--~~~~~~~~~~~~~a~~  220 (257)
                      ..+. +|...+.+.+       ..++.++.++|+.+..+....     +......... ...  ......++..+|+|++
T Consensus       184 ~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~a  255 (378)
T PLN00016        184 KPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASM  255 (378)
T ss_pred             CCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHH
Confidence            1122 7888887654       248999999999887764211     1111000000 000  1112246789999999


Q ss_pred             HHHhcCCCCCcccccEEEecCceeee
Q 044485          221 ALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       221 ~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ++.++....  ..|+.+++.++..++
T Consensus       256 i~~~l~~~~--~~~~~yni~~~~~~s  279 (378)
T PLN00016        256 FALVVGNPK--AAGQIFNIVSDRAVT  279 (378)
T ss_pred             HHHHhcCcc--ccCCEEEecCCCccC
Confidence            998886532  357889998876544

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.04  E-value=1.9e-09  Score=87.30  Aligned_cols=212  Identities=17%  Similarity=0.095  Sum_probs=137.1

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHc--CCeEEEeeC-cchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKH--GAKVLIADI-KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~--g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ...+.++|||+.|.||...+..++..  .++.+..+. .--.-.+..+++...    ....++..|+.+...+..++.+ 
T Consensus         4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~----p~ykfv~~di~~~~~~~~~~~~-   78 (331)
T KOG0747|consen    4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNS----PNYKFVEGDIADADLVLYLFET-   78 (331)
T ss_pred             CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccC----CCceEeeccccchHHHHhhhcc-
Confidence            44589999999999999999999886  344443321 100002333333322    3378999999999887776653 


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhcccc-----------
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGIIG-----------  144 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~~~-----------  144 (257)
                          ..+|.|+|-|+...-      +.+.-+-....+.|+.++..+.....           |.....|           
T Consensus        79 ----~~id~vihfaa~t~v------d~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~  148 (331)
T KOG0747|consen   79 ----EEIDTVIHFAAQTHV------DRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEA  148 (331)
T ss_pred             ----CchhhhhhhHhhhhh------hhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccccccccc
Confidence                379999999986542      11222234566788999888865552           2221111           


Q ss_pred             --CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh---h--ccccCc--c--ccccCCCCC
Q 044485          145 --GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA---D--DGLGGM--Y--SNLKGAVLE  213 (257)
Q Consensus       145 --~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~---~--~~~~~~--~--~~~~~~~~~  213 (257)
                        ..+..+|+++|+|.+++++++.+.|   |+.+..++-+.|..|..-...-..   .  ......  .  +...+.++.
T Consensus       149 s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~  225 (331)
T KOG0747|consen  149 SLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLY  225 (331)
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEe
Confidence              1223479999999999999999886   888888888888887542211111   1  001111  1  223345778


Q ss_pred             HHHHHHHHHHhcCCCCCcccccEEEecCc
Q 044485          214 PEDAAEAALYLGSDESKCVSGHNLVVDGG  242 (257)
Q Consensus       214 ~~~~a~~~~~l~s~~~~~~~G~~~~~dgG  242 (257)
                      ++|+++++...+....   .|+.+++.-.
T Consensus       226 veD~~ea~~~v~~Kg~---~geIYNIgtd  251 (331)
T KOG0747|consen  226 VEDVSEAFKAVLEKGE---LGEIYNIGTD  251 (331)
T ss_pred             HHHHHHHHHHHHhcCC---ccceeeccCc
Confidence            9999999998887632   6999887543

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.04  E-value=9e-09  Score=96.41  Aligned_cols=189  Identities=14%  Similarity=0.131  Sum_probs=114.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      .+++|||||+|.||+++++.|.++|++|...                           ..|++|.+.+...+++.     
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~---------------------------~~~l~d~~~v~~~i~~~-----  427 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG---------------------------KGRLEDRSSLLADIRNV-----  427 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEee---------------------------ccccccHHHHHHHHHhh-----
Confidence            4679999999999999999999999887311                           13677888877776653     


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------Hhhhccc------------cC-----
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------LGVCGII------------GG-----  145 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------~s~~~~~------------~~-----  145 (257)
                      ++|+|||+|+....   +..+...++....+++|+.++..+....         .|+....            +.     
T Consensus       428 ~pd~Vih~Aa~~~~---~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~  504 (668)
T PLN02260        428 KPTHVFNAAGVTGR---PNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFATGCIFEYDAKHPEGSGIGFKEEDK  504 (668)
T ss_pred             CCCEEEECCcccCC---CCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcccceecCCcccccccCCCCCcCCC
Confidence            69999999997642   1122334456788899999999886654         1111111            11     


Q ss_pred             --CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHH
Q 044485          146 --AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       146 --~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  223 (257)
                        +....|+.||.+.+.+++....   -..+|+..+..+....+  +++....-.... ....+ ......+++..+++.
T Consensus       505 ~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~~~~~~~~--~nfv~~~~~~~~-~~~vp-~~~~~~~~~~~~~~~  577 (668)
T PLN02260        505 PNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPISSDLSNP--RNFITKISRYNK-VVNIP-NSMTVLDELLPISIE  577 (668)
T ss_pred             CCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEecccCCCCc--cHHHHHHhccce-eeccC-CCceehhhHHHHHHH
Confidence              1125799999999999987642   24567776664332221  111111000000 11111 123345556655566


Q ss_pred             hcCCCCCcccccEEEecCceeee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ++...    .|.++++.++-.++
T Consensus       578 l~~~~----~~giyni~~~~~~s  596 (668)
T PLN02260        578 MAKRN----LRGIWNFTNPGVVS  596 (668)
T ss_pred             HHHhC----CCceEEecCCCcCc
Confidence            66432    14678887765443

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.96  E-value=3.3e-08  Score=88.42  Aligned_cols=156  Identities=19%  Similarity=0.131  Sum_probs=103.0

Q ss_pred             EecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHH---HHHHHHHHH---HHHc
Q 044485           17 ITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEK---DIENAVNTA---VTQY   90 (257)
Q Consensus        17 ItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---~v~~~~~~~---~~~~   90 (257)
                      |+||++|+|.++++.|...|++|+.+.+.......         ....++..+.+|.+..+   .+..+.+.+   ....
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~---------~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~~l~~l  113 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA---------GWGDRFGALVFDATGITDPADLKALYEFFHPVLRSL  113 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccccc---------CcCCcccEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence            88888999999999999999999988765542100         00112444455665443   333222221   1111


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhhccccCCCCchhhhhHHHHHHHHHHHHHHhc
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG  170 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~  170 (257)
                      .+---+|+...                                     .   ........|+++|+++.+|+|++++|+ 
T Consensus       114 ~~~griv~i~s-------------------------------------~---~~~~~~~~~~~akaal~gl~rsla~E~-  152 (450)
T PRK08261        114 APCGRVVVLGR-------------------------------------P---PEAAADPAAAAAQRALEGFTRSLGKEL-  152 (450)
T ss_pred             cCCCEEEEEcc-------------------------------------c---cccCCchHHHHHHHHHHHHHHHHHHHh-
Confidence            11001111111                                     0   000123458999999999999999999 


Q ss_pred             cCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeeecce
Q 044485          171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGF  250 (257)
Q Consensus       171 ~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~~~~  250 (257)
                      ++||+++.|.|+.                            ..++++++.+.|++++...+++|+.+.++++......++
T Consensus       153 ~~gi~v~~i~~~~----------------------------~~~~~~~~~~~~l~s~~~a~~~g~~i~~~~~~~~~~~~~  204 (450)
T PRK08261        153 RRGATAQLVYVAP----------------------------GAEAGLESTLRFFLSPRSAYVSGQVVRVGAADAAPPADW  204 (450)
T ss_pred             hcCCEEEEEecCC----------------------------CCHHHHHHHHHHhcCCccCCccCcEEEecCCcccCCCCc
Confidence            7899999998874                            257889999999999999999999999999875433333

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.88  E-value=8.1e-09  Score=90.07  Aligned_cols=81  Identities=26%  Similarity=0.314  Sum_probs=63.0

Q ss_pred             cccCCcEEEEecC----------------CCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEec
Q 044485            8 RRLQGKVALITGG----------------ARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC   71 (257)
Q Consensus         8 ~~~~~k~~lItGa----------------s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~   71 (257)
                      .++.||++|||||                ||.+|.++|++|+++|++|++++++.+ ++     .    +    .....+
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~----~----~~~~~~  249 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----T----P----AGVKRI  249 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----C----C----CCcEEE
Confidence            4588999999999                555999999999999999999988752 11     0    0    113467


Q ss_pred             CCCCHHHHHHHHHHHHHHcCCccEEEeCCCCCCC
Q 044485           72 DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDE  105 (257)
Q Consensus        72 D~~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~  105 (257)
                      |+++.+++.+.++   +.++.+|++|||||+...
T Consensus       250 dv~~~~~~~~~v~---~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        250 DVESAQEMLDAVL---AALPQADIFIMAAAVADY  280 (399)
T ss_pred             ccCCHHHHHHHHH---HhcCCCCEEEEccccccc
Confidence            9999888776665   457889999999998643

>PRK12320 hypothetical protein; Provisional

Probab=98.86  E-value=5.2e-08  Score=90.21  Aligned_cols=181  Identities=12%  Similarity=0.044  Sum_probs=108.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      ++|||||+|.||++++++|.++|++|++++|.....      .   .   ..+.++.+|++++. +.+++       .++
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~------~---~---~~ve~v~~Dl~d~~-l~~al-------~~~   61 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA------L---D---PRVDYVCASLRNPV-LQELA-------GEA   61 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc------c---c---CCceEEEccCCCHH-HHHHh-------cCC
Confidence            699999999999999999999999999999865321      0   0   13778999999873 43333       258


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh-------hccccCCCCchhhhhHHHHHHHHHHHH
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV-------CGIIGGAATHAYTSSKHGLLGLMKNTA  166 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~-------~~~~~~~~~~~y~~sK~a~~~~~~~l~  166 (257)
                      |+|||+|+....  .            ...+|+.++.++.......       ++..+.  ...|.    ..+.+.+   
T Consensus        62 D~VIHLAa~~~~--~------------~~~vNv~Gt~nLleAA~~~GvRiV~~SS~~G~--~~~~~----~aE~ll~---  118 (699)
T PRK12320         62 DAVIHLAPVDTS--A------------PGGVGITGLAHVANAAARAGARLLFVSQAAGR--PELYR----QAETLVS---  118 (699)
T ss_pred             CEEEEcCccCcc--c------------hhhHHHHHHHHHHHHHHHcCCeEEEEECCCCC--Ccccc----HHHHHHH---
Confidence            999999985321  0            1136777777765444110       000111  11232    2233322   


Q ss_pred             HHhccCCcEEEeecCCCccChhhHhH-hhhhhccccC-ccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCcee
Q 044485          167 VELGRFGIRVNCVSPYAVSTPLAKDF-LKLADDGLGG-MYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       167 ~e~~~~gi~v~~i~pg~v~t~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~  244 (257)
                       .   .++.+..+.|+.+..+..... .......... ....+. .++..+|++++++.++...   .+| ++++.||..
T Consensus       119 -~---~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI-~vIyVdDvv~alv~al~~~---~~G-iyNIG~~~~  189 (699)
T PRK12320        119 -T---GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPI-RVLHLDDLVRFLVLALNTD---RNG-VVDLATPDT  189 (699)
T ss_pred             -h---cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCce-EEEEHHHHHHHHHHHHhCC---CCC-EEEEeCCCe
Confidence             1   347788888888877632110 0000000000 001111 1358999999998887643   245 899999977


Q ss_pred             ee
Q 044485          245 IV  246 (257)
Q Consensus       245 ~~  246 (257)
                      ++
T Consensus       190 ~S  191 (699)
T PRK12320        190 TN  191 (699)
T ss_pred             eE
Confidence            65

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.85  E-value=2.9e-09  Score=99.99  Aligned_cols=150  Identities=14%  Similarity=0.197  Sum_probs=120.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhh---HhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLG---ESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .|+++|+||-||.|..++++|..+|++ +++++|+.-+.   .......++.   +.+|.+-..|++..+....++++..
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~---GVqV~vsT~nitt~~ga~~Li~~s~ 1844 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR---GVQVQVSTSNITTAEGARGLIEESN 1844 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc---CeEEEEecccchhhhhHHHHHHHhh
Confidence            589999999999999999999999998 89999986432   2233333333   3556666778888888888777654


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHH-------------HHHhhhccccCCCCchhhhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRN-------------MLLGVCGIIGGAATHAYTSS  154 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~-------------~~~s~~~~~~~~~~~~y~~s  154 (257)
                       +.+++..++|.|.+...  ..+++.+.+++++..+-.+.++.++-+             +|+|+..-.+..+..-|+-+
T Consensus      1845 -kl~~vGGiFnLA~VLRD--~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQtNYG~a 1921 (2376)
T KOG1202|consen 1845 -KLGPVGGIFNLAAVLRD--GLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQTNYGLA 1921 (2376)
T ss_pred             -hcccccchhhHHHHHHh--hhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcccccchh
Confidence             45789999999998866  789999999999999999999998843             33677777788889999999


Q ss_pred             HHHHHHHHHHHHH
Q 044485          155 KHGLLGLMKNTAV  167 (257)
Q Consensus       155 K~a~~~~~~~l~~  167 (257)
                      .++++.++..-+.
T Consensus      1922 NS~MERiceqRr~ 1934 (2376)
T KOG1202|consen 1922 NSAMERICEQRRH 1934 (2376)
T ss_pred             hHHHHHHHHHhhh
Confidence            9999999976443

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.82  E-value=6.1e-08  Score=78.78  Aligned_cols=195  Identities=16%  Similarity=0.128  Sum_probs=119.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ..+.+++++||||+|.||.+++.+|..+|..|++++.-.....+..+-.-..    ..+..+.-|+..+     ++.   
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~----~~fel~~hdv~~p-----l~~---   90 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGH----PNFELIRHDVVEP-----LLK---   90 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccC----cceeEEEeechhH-----HHH---
Confidence            3467899999999999999999999999999999986554333322222111    1255566666544     333   


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------Hhhhcccc--------------
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------LGVCGIIG--------------  144 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------~s~~~~~~--------------  144 (257)
                          .+|.++|.|+...+.   .....   ..+.+..|++++.......         .|.+..+|              
T Consensus        91 ----evD~IyhLAapasp~---~y~~n---pvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~  160 (350)
T KOG1429|consen   91 ----EVDQIYHLAAPASPP---HYKYN---PVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGN  160 (350)
T ss_pred             ----HhhhhhhhccCCCCc---ccccC---ccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccc
Confidence                488999999877642   22222   2567788888888764333         23333333              


Q ss_pred             ---CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH-------hHhhhhhccccCcc-----ccccC
Q 044485          145 ---GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK-------DFLKLADDGLGGMY-----SNLKG  209 (257)
Q Consensus       145 ---~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~-------~~~~~~~~~~~~~~-----~~~~~  209 (257)
                         ......|...|.+.+.|+.+..++   .||-+....+-.+..|...       ..+.. .....+..     ....+
T Consensus       161 vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm~~~dgrvvsnf~~-q~lr~epltv~g~G~qtR  236 (350)
T KOG1429|consen  161 VNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRMHMDDGRVVSNFIA-QALRGEPLTVYGDGKQTR  236 (350)
T ss_pred             cCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCccccCCChhhHHHHH-HHhcCCCeEEEcCCcceE
Confidence               233346999999999998876655   6887766666554444321       11110 01111111     12223


Q ss_pred             CCCCHHHHHHHHHHhcCCC
Q 044485          210 AVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       210 ~~~~~~~~a~~~~~l~s~~  228 (257)
                      .+.-..|+.+.++.|....
T Consensus       237 SF~yvsD~Vegll~Lm~s~  255 (350)
T KOG1429|consen  237 SFQYVSDLVEGLLRLMESD  255 (350)
T ss_pred             EEEeHHHHHHHHHHHhcCC
Confidence            4667889999998887554

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.80  E-value=3e-08  Score=83.33  Aligned_cols=84  Identities=21%  Similarity=0.328  Sum_probs=64.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc---hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKD---DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      ++++|+++|+|+ ||+|++++..|++.|+. |++++|+.   ++.+++.+++....+   .+.+..+|+++.++++..++
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~---~~~~~~~d~~~~~~~~~~~~  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP---ECIVNVYDLNDTEKLKAEIA  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC---CceeEEechhhhhHHHhhhc
Confidence            467899999999 69999999999999997 99999997   566666666643321   24566788887777665443


Q ss_pred             HHHHHcCCccEEEeCCCCC
Q 044485           85 TAVTQYGKLDIMFNNAGTV  103 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~  103 (257)
                             ..|+||||....
T Consensus       199 -------~~DilINaTp~G  210 (289)
T PRK12548        199 -------SSDILVNATLVG  210 (289)
T ss_pred             -------cCCEEEEeCCCC
Confidence                   469999998654

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.79  E-value=2.3e-07  Score=77.04  Aligned_cols=200  Identities=15%  Similarity=0.087  Sum_probs=118.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +.+|||||||.+|.+++++|.++|+.|.+..|+.+......          ..+.+...|+.+++++...++       +
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~----------~~v~~~~~d~~~~~~l~~a~~-------G   63 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA----------GGVEVVLGDLRDPKSLVAGAK-------G   63 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc----------CCcEEEEeccCCHhHHHHHhc-------c
Confidence            37999999999999999999999999999999988766654          128899999999999988776       7


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhhccccC-CCCchhhhhHHHHHHHHHHHHHHhcc
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGG-AATHAYTSSKHGLLGLMKNTAVELGR  171 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~~~~~~-~~~~~y~~sK~a~~~~~~~l~~e~~~  171 (257)
                      +|.+++..+... ....+.........+..+..-    .....+......-.. .....|..+|...+...++       
T Consensus        64 ~~~~~~i~~~~~-~~~~~~~~~~~~~~~~a~~a~----~~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~l~~-------  131 (275)
T COG0702          64 VDGVLLISGLLD-GSDAFRAVQVTAVVRAAEAAG----AGVKHGVSLSVLGADAASPSALARAKAAVEAALRS-------  131 (275)
T ss_pred             ccEEEEEecccc-cccchhHHHHHHHHHHHHHhc----CCceEEEEeccCCCCCCCccHHHHHHHHHHHHHHh-------
Confidence            889888887653 111111111111111100000    000111111111111 2446788889888888776       


Q ss_pred             CCcEEEeec-CCCccChhhHhHhhhhhccccCccccc--cCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCcee
Q 044485          172 FGIRVNCVS-PYAVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       172 ~gi~v~~i~-pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~  244 (257)
                      .|+.-..+. |+++.............. .......+  .-..+..++++..+...+..+.  ..|..+.+.|-..
T Consensus       132 sg~~~t~lr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~--~~~~~~~l~g~~~  204 (275)
T COG0702         132 SGIPYTTLRRAAFYLGAGAAFIEAAEAA-GLPVIPRGIGRLSPIAVDDVAEALAAALDAPA--TAGRTYELAGPEA  204 (275)
T ss_pred             cCCCeEEEecCeeeeccchhHHHHHHhh-CCceecCCCCceeeeEHHHHHHHHHHHhcCCc--ccCcEEEccCCce
Confidence            466655555 444443322111111010 00011111  1235678999998888876554  5677777777533

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.76  E-value=8.1e-08  Score=76.06  Aligned_cols=85  Identities=18%  Similarity=0.348  Sum_probs=68.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++++++|+|++|++|+.+++.|++.|++|++++|+.++++++.+.+....+    .....+|..+.+++.+.++   
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~----~~~~~~~~~~~~~~~~~~~---   96 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFG----EGVGAVETSDDAARAAAIK---   96 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcC----CcEEEeeCCCHHHHHHHHh---
Confidence            367899999999999999999999999999999999999888888777643221    3455678888888776664   


Q ss_pred             HHcCCccEEEeCCCCC
Q 044485           88 TQYGKLDIMFNNAGTV  103 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~  103 (257)
                          ..|+||++....
T Consensus        97 ----~~diVi~at~~g  108 (194)
T cd01078          97 ----GADVVFAAGAAG  108 (194)
T ss_pred             ----cCCEEEECCCCC
Confidence                589999876543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.61  E-value=7.9e-07  Score=70.11  Aligned_cols=181  Identities=16%  Similarity=0.174  Sum_probs=107.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCe---EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAK---VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~---Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ++++|||++|=.|++|.+.+...|..   .++.+..                        .+|+++..+.++++++.   
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk------------------------d~DLt~~a~t~~lF~~e---   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK------------------------DADLTNLADTRALFESE---   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc------------------------cccccchHHHHHHHhcc---
Confidence            78999999999999999999999872   3333211                        27999999999998864   


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCC--HHHHHHHH--hhhchhhhHH---HHHHHhhh----------------ccc--c
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDND--QAEFERIL--SINLVGAFLG---RNMLLGVC----------------GII--G  144 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~--~~~~~~~~--~~n~~~~~~l---~~~~~s~~----------------~~~--~  144 (257)
                        ++-.+||.|+-+.   ..+...+  .+=+...+  +.|+.-..+-   .+.++..+                -..  +
T Consensus        55 --kPthVIhlAAmVG---Glf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpp  129 (315)
T KOG1431|consen   55 --KPTHVIHLAAMVG---GLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPP  129 (315)
T ss_pred             --CCceeeehHhhhc---chhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCC
Confidence              5778888876543   2222221  22222322  3333332221   22221111                111  1


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccCh--------------hhHhHhhhhhccccCcc----cc
Q 044485          145 GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTP--------------LAKDFLKLADDGLGGMY----SN  206 (257)
Q Consensus       145 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~--------------~~~~~~~~~~~~~~~~~----~~  206 (257)
                      .+....|+.+|-.+.-..++.++++   |-...++.|-.+..|              +.++.............    ..
T Consensus       130 hpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~  206 (315)
T KOG1431|consen  130 HPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGS  206 (315)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCC
Confidence            2334479999987777778888775   445555555444333              12222222222222222    56


Q ss_pred             ccCCCCCHHHHHHHHHHhcCCC
Q 044485          207 LKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       207 ~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      |.+.++..+|+|++++|++.+-
T Consensus       207 PlRqFiys~DLA~l~i~vlr~Y  228 (315)
T KOG1431|consen  207 PLRQFIYSDDLADLFIWVLREY  228 (315)
T ss_pred             hHHHHhhHhHHHHHHHHHHHhh
Confidence            7777889999999999998653

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.59  E-value=4.5e-07  Score=73.59  Aligned_cols=99  Identities=17%  Similarity=0.230  Sum_probs=65.7

Q ss_pred             cEEEEecCCCc-hHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARG-IGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~g-iG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      .+=.||+.|+| +|.++|++|+++|++|++++|......        ...  ..+.++.++     +.+++.+.+.+.++
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--------~~~--~~v~~i~v~-----s~~~m~~~l~~~~~   80 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--------EPH--PNLSIIEIE-----NVDDLLETLEPLVK   80 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--------CCC--CCeEEEEEe-----cHHHHHHHHHHHhc
Confidence            35667766655 999999999999999999987642110        000  124555532     23333344444456


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchh
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG  128 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~  128 (257)
                      .+|++|||||+...  .+....+.+++.+++++|...
T Consensus        81 ~~DivIh~AAvsd~--~~~~~~~~~~~~~~~~v~~~~  115 (229)
T PRK06732         81 DHDVLIHSMAVSDY--TPVYMTDLEEVSASDNLNEFL  115 (229)
T ss_pred             CCCEEEeCCccCCc--eehhhhhhhhhhhhhhhhhhh
Confidence            79999999998643  456667788888888887544

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.59  E-value=3e-07  Score=80.08  Aligned_cols=80  Identities=29%  Similarity=0.337  Sum_probs=61.3

Q ss_pred             ccCCcEEEEecC---------------CCc-hHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecC
Q 044485            9 RLQGKVALITGG---------------ARG-IGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD   72 (257)
Q Consensus         9 ~~~~k~~lItGa---------------s~g-iG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D   72 (257)
                      ++.||++|||||               |+| +|.++|++|+.+|++|+++++.....      .    +    -....+|
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~----~----~~~~~~~  247 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------T----P----PGVKSIK  247 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------C----C----CCcEEEE
Confidence            588999999999               666 99999999999999999988665321      1    1    1124579


Q ss_pred             CCCHHHH-HHHHHHHHHHcCCccEEEeCCCCCCC
Q 044485           73 VTKEKDI-ENAVNTAVTQYGKLDIMFNNAGTVDE  105 (257)
Q Consensus        73 ~~~~~~v-~~~~~~~~~~~~~id~lv~~ag~~~~  105 (257)
                      +++.+++ +.++++.   ++.+|++|+|||+...
T Consensus       248 v~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~  278 (390)
T TIGR00521       248 VSTAEEMLEAALNEL---AKDFDIFISAAAVADF  278 (390)
T ss_pred             eccHHHHHHHHHHhh---cccCCEEEEccccccc
Confidence            9998888 5555443   4679999999998653

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.57  E-value=5.9e-07  Score=78.90  Aligned_cols=168  Identities=13%  Similarity=0.122  Sum_probs=105.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC---eEEEeeCcchh---hHhHHHH--------hc-cCCCCCCCceeEecCC
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA---KVLIADIKDDL---GESVCKD--------IG-SSSSSASGCSYVHCDV   73 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~---~Vi~~~r~~~~---~~~~~~~--------~~-~~~~~~~~v~~~~~D~   73 (257)
                      -+.+|+++||||||.+|+-++..|.+.--   ++++.-|....   .+++.++        +. ..+..-.++..+.+|+
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            37899999999999999999999998642   46777664421   1222222        21 1233346688899999


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhh--
Q 044485           74 TKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVC--  140 (257)
Q Consensus        74 ~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~--  140 (257)
                      ++++---+.-+.- .....+|++||+|+....         .|.++..+.+|+.|+..+.+..-           |.+  
T Consensus        89 ~~~~LGis~~D~~-~l~~eV~ivih~AAtvrF---------de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~  158 (467)
T KOG1221|consen   89 SEPDLGISESDLR-TLADEVNIVIHSAATVRF---------DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYS  158 (467)
T ss_pred             cCcccCCChHHHH-HHHhcCCEEEEeeeeecc---------chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhe
Confidence            8765422111110 111269999999997654         25578888999999988754441           100  


Q ss_pred             -------cccc--------------------------------CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecC
Q 044485          141 -------GIIG--------------------------------GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSP  181 (257)
Q Consensus       141 -------~~~~--------------------------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~p  181 (257)
                             ...+                                ......|.-+|+-.++++..-+     .++.+..++|
T Consensus       159 n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~-----~~lPivIiRP  233 (467)
T KOG1221|consen  159 NCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA-----ENLPLVIIRP  233 (467)
T ss_pred             ecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc-----cCCCeEEEcC
Confidence                   0000                                0112258888887777775533     4688899999


Q ss_pred             CCccChhhHh
Q 044485          182 YAVSTPLAKD  191 (257)
Q Consensus       182 g~v~t~~~~~  191 (257)
                      +.+.+....+
T Consensus       234 siI~st~~EP  243 (467)
T KOG1221|consen  234 SIITSTYKEP  243 (467)
T ss_pred             CceeccccCC
Confidence            8876654433

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.54  E-value=1.3e-06  Score=78.01  Aligned_cols=230  Identities=16%  Similarity=0.080  Sum_probs=132.7

Q ss_pred             ccCCcEEEEecCC-CchHHHHHHHHHHcCCeEEEeeCcch-hhHhHHHHh-ccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            9 RLQGKVALITGGA-RGIGECTARLFSKHGAKVLIADIKDD-LGESVCKDI-GSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         9 ~~~~k~~lItGas-~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~-~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      .+.++++|||||+ +.||.+++.+|++-|++||++..+-. ...+..+.+ ......+....++..++++..+++.+++-
T Consensus       393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew  472 (866)
T COG4982         393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW  472 (866)
T ss_pred             CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence            5678999999999 88999999999999999998865532 223333333 22222334478899999999999999988


Q ss_pred             HHHHcC--------------CccEEEeCCCCCCCCCCCCCCCC--HHHHHHHHhhhchhhhHHHHHH-------------
Q 044485           86 AVTQYG--------------KLDIMFNNAGTVDEVKPNILDND--QAEFERILSINLVGAFLGRNML-------------  136 (257)
Q Consensus        86 ~~~~~~--------------~id~lv~~ag~~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~-------------  136 (257)
                      |-....              .+|.+|--|++...  ..+.+..  .|.-.+.+-.|+.-.+-...-+             
T Consensus       473 Ig~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~--G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVV  550 (866)
T COG4982         473 IGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVS--GELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVV  550 (866)
T ss_pred             hccccccccCCcceecccccCcceeeecccCCcc--CccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEE
Confidence            743211              37788887776544  3333332  2333344333332222111111             


Q ss_pred             Hhhhcccc-CCCCchhhhhHHHHHHHHHHHHHHh--ccCCcEEEeecCCCccChh-hHhHhhhhhccccCccccccCCCC
Q 044485          137 LGVCGIIG-GAATHAYTSSKHGLLGLMKNTAVEL--GRFGIRVNCVSPYAVSTPL-AKDFLKLADDGLGGMYSNLKGAVL  212 (257)
Q Consensus       137 ~s~~~~~~-~~~~~~y~~sK~a~~~~~~~l~~e~--~~~gi~v~~i~pg~v~t~~-~~~~~~~~~~~~~~~~~~~~~~~~  212 (257)
                      ++.+...+ +.+-..|+-+|++++.++.-+..|-  +. -+.++.-.-||+..-. .-...-..     ......--+..
T Consensus       551 LPgSPNrG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~-~vsl~~A~IGWtrGTGLMg~Ndiiv-----~aiEk~GV~ty  624 (866)
T COG4982         551 LPGSPNRGMFGGDGAYGESKLALDAVVNRWHSESSWAA-RVSLAHALIGWTRGTGLMGHNDIIV-----AAIEKAGVRTY  624 (866)
T ss_pred             ecCCCCCCccCCCcchhhHHHHHHHHHHHhhccchhhH-HHHHhhhheeeeccccccCCcchhH-----HHHHHhCceec
Confidence            11111111 1223479999999999886655542  11 1233333346654321 11100000     00011112467


Q ss_pred             CHHHHHHHHHHhcCCCCCc---ccccEEEecCceeee
Q 044485          213 EPEDAAEAALYLGSDESKC---VSGHNLVVDGGFAIV  246 (257)
Q Consensus       213 ~~~~~a~~~~~l~s~~~~~---~~G~~~~~dgG~~~~  246 (257)
                      +++|+|..++-|++.....   -+=-...++||+...
T Consensus       625 S~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~~  661 (866)
T COG4982         625 STDEMAFNLLGLASAEVVELAASSPITADLTGGLGEV  661 (866)
T ss_pred             CHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccccc
Confidence            8999999999999775321   133456788888765

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.50  E-value=4e-06  Score=68.48  Aligned_cols=203  Identities=16%  Similarity=0.140  Sum_probs=124.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +++|-++-|.||||.+|+.++++|++.|-.|++-.|..+.--.-.+-+.+.    .++.+...|+.|++|++++++    
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdL----GQvl~~~fd~~DedSIr~vvk----  129 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDL----GQVLFMKFDLRDEDSIRAVVK----  129 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccc----cceeeeccCCCCHHHHHHHHH----
Confidence            578889999999999999999999999999999999775432222222222    248999999999999999998    


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------HhhhccccCCCCchhhhhHHHH
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGIIGGAATHAYTSSKHGL  158 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~~~~~~~~y~~sK~a~  158 (257)
                         .-+++||..|--.+    -...+      ..++|+.++-.+.+..          +|..+ ......+-|--+|++-
T Consensus       130 ---~sNVVINLIGrd~e----Tknf~------f~Dvn~~~aerlAricke~GVerfIhvS~Lg-anv~s~Sr~LrsK~~g  195 (391)
T KOG2865|consen  130 ---HSNVVINLIGRDYE----TKNFS------FEDVNVHIAERLARICKEAGVERFIHVSCLG-ANVKSPSRMLRSKAAG  195 (391)
T ss_pred             ---hCcEEEEeeccccc----cCCcc------cccccchHHHHHHHHHHhhChhheeehhhcc-ccccChHHHHHhhhhh
Confidence               46799999985322    11111      1234544444443322          12222 1122233466677777


Q ss_pred             HHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccc--------cccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          159 LGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYS--------NLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       159 ~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +--+|..   +    --++.|.|..+...-.+ ++......|+.+..        ...+..+-+-|+|+.|.-.+.+.. 
T Consensus       196 E~aVrda---f----PeAtIirPa~iyG~eDr-fln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~-  266 (391)
T KOG2865|consen  196 EEAVRDA---F----PEATIIRPADIYGTEDR-FLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPD-  266 (391)
T ss_pred             HHHHHhh---C----Ccceeechhhhcccchh-HHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCcc-
Confidence            7666542   2    23567888766543322 11222222221111        111234456789999998887663 


Q ss_pred             cccccEEEecCce
Q 044485          231 CVSGHNLVVDGGF  243 (257)
Q Consensus       231 ~~~G~~~~~dgG~  243 (257)
                       -.|.++..-|=.
T Consensus       267 -s~Gktye~vGP~  278 (391)
T KOG2865|consen  267 -SMGKTYEFVGPD  278 (391)
T ss_pred             -ccCceeeecCCc
Confidence             478887766543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.39  E-value=1.7e-06  Score=74.69  Aligned_cols=78  Identities=21%  Similarity=0.358  Sum_probs=67.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcC-CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +.+||.|+ |++|+.+|+.|++.| .+|++++|+.+++.+..+....      ++...++|+.|.+.+.++++       
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~------~v~~~~vD~~d~~al~~li~-------   67 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGG------KVEALQVDAADVDALVALIK-------   67 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccc------cceeEEecccChHHHHHHHh-------
Confidence            68999999 999999999999999 8899999999988887665532      48899999999999988887       


Q ss_pred             CccEEEeCCCCCC
Q 044485           92 KLDIMFNNAGTVD  104 (257)
Q Consensus        92 ~id~lv~~ag~~~  104 (257)
                      ..|++||++....
T Consensus        68 ~~d~VIn~~p~~~   80 (389)
T COG1748          68 DFDLVINAAPPFV   80 (389)
T ss_pred             cCCEEEEeCCchh
Confidence            3599999998653

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.33  E-value=1.9e-06  Score=64.15  Aligned_cols=78  Identities=22%  Similarity=0.374  Sum_probs=59.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++++++++|.|+ ||.|++++..|+..|+. |+++.|+.++.+++.+++...     .+.++.  +.+..   +.+.  
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~-----~~~~~~--~~~~~---~~~~--   74 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGV-----NIEAIP--LEDLE---EALQ--   74 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGC-----SEEEEE--GGGHC---HHHH--
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCcc-----ccceee--HHHHH---HHHh--
Confidence            4789999999998 99999999999999998 999999999999988887321     133333  33322   2222  


Q ss_pred             HHHcCCccEEEeCCCCC
Q 044485           87 VTQYGKLDIMFNNAGTV  103 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~  103 (257)
                           ..|+||++.+..
T Consensus        75 -----~~DivI~aT~~~   86 (135)
T PF01488_consen   75 -----EADIVINATPSG   86 (135)
T ss_dssp             -----TESEEEE-SSTT
T ss_pred             -----hCCeEEEecCCC
Confidence                 699999998865

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.30  E-value=2.4e-06  Score=68.30  Aligned_cols=204  Identities=16%  Similarity=0.052  Sum_probs=125.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH-HHHh----ccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV-CKDI----GSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~-~~~~----~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .|++||||-+|.=|..++.-|..+|+.|...-|+....... .+.+    ....  +.....+-.|++|...+-+++..+
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~--~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHN--GASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcc--cceeEEeeccccchHHHHHHHhcc
Confidence            46899999999999999999999999998877765433221 1211    1122  234778889999999999998887


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------------H---------hhhc
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------------L---------GVCG  141 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------------~---------s~~~  141 (257)
                           .++-+.|.|+..+-      ..+.+-.+-.-++...|++.+...+                +         +-..
T Consensus       106 -----kPtEiYnLaAQSHV------kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE  174 (376)
T KOG1372|consen  106 -----KPTEVYNLAAQSHV------KVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSE  174 (376)
T ss_pred             -----Cchhhhhhhhhcce------EEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCccc
Confidence                 47777888775432      1111112233355566666654444                1         1122


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHH---HhccCCcEEEeecCCCccChhhHh----HhhhhhccccCcc---ccccCCC
Q 044485          142 IIGGAATHAYTSSKHGLLGLMKNTAV---ELGRFGIRVNCVSPYAVSTPLAKD----FLKLADDGLGGMY---SNLKGAV  211 (257)
Q Consensus       142 ~~~~~~~~~y~~sK~a~~~~~~~l~~---e~~~~gi~v~~i~pg~v~t~~~~~----~~~~~~~~~~~~~---~~~~~~~  211 (257)
                      ..|+.+.++|+++|.+--=++-..+.   -++=.||-+|.=+|.-=++-.++.    ...+.-.....+.   -...+.|
T Consensus       175 ~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDW  254 (376)
T KOG1372|consen  175 TTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDW  254 (376)
T ss_pred             CCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhccc
Confidence            34555667899998764322222222   234568999988885333333333    3222221111111   1234568


Q ss_pred             CCHHHHHHHHHHhcCCC
Q 044485          212 LEPEDAAEAALYLGSDE  228 (257)
Q Consensus       212 ~~~~~~a~~~~~l~s~~  228 (257)
                      +.+.|-+++.|.++..+
T Consensus       255 GhA~dYVEAMW~mLQ~d  271 (376)
T KOG1372|consen  255 GHAGDYVEAMWLMLQQD  271 (376)
T ss_pred             chhHHHHHHHHHHHhcC
Confidence            89999999999888665

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.27  E-value=4.1e-06  Score=74.96  Aligned_cols=77  Identities=25%  Similarity=0.393  Sum_probs=58.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++++|+++|+|+++ +|.++|+.|+++|++|++++++. +..++..+++...+     +.++..|..+            
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~------------   63 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG-----IELVLGEYPE------------   63 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC-----CEEEeCCcch------------
Confidence            67899999999877 99999999999999999999875 34444444453322     5677777765            


Q ss_pred             HHcCCccEEEeCCCCC
Q 044485           88 TQYGKLDIMFNNAGTV  103 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~  103 (257)
                      +..+.+|+||+++|..
T Consensus        64 ~~~~~~d~vv~~~g~~   79 (450)
T PRK14106         64 EFLEGVDLVVVSPGVP   79 (450)
T ss_pred             hHhhcCCEEEECCCCC
Confidence            1224799999999974

>PRK09620 hypothetical protein; Provisional

Probab=98.20  E-value=2.6e-06  Score=69.01  Aligned_cols=83  Identities=24%  Similarity=0.293  Sum_probs=51.1

Q ss_pred             cCCcEEEEecCC----------------CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCC
Q 044485           10 LQGKVALITGGA----------------RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDV   73 (257)
Q Consensus        10 ~~~k~~lItGas----------------~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~   73 (257)
                      +.||++|||+|.                |.+|.++|++|.++|++|+++++.......   ...    ....+..+..|.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~----~~~~~~~V~s~~   73 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN----NQLELHPFEGII   73 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC----CceeEEEEecHH
Confidence            468999999886                999999999999999999988764321110   000    011122333322


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEeCCCCCC
Q 044485           74 TKEKDIENAVNTAVTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        74 ~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~  104 (257)
                          ++.+.+.++.+. ..+|++||+|++..
T Consensus        74 ----d~~~~l~~~~~~-~~~D~VIH~AAvsD   99 (229)
T PRK09620         74 ----DLQDKMKSIITH-EKVDAVIMAAAGSD   99 (229)
T ss_pred             ----HHHHHHHHHhcc-cCCCEEEECccccc
Confidence                222223332221 25899999999854

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.19  E-value=7e-06  Score=72.00  Aligned_cols=76  Identities=24%  Similarity=0.424  Sum_probs=59.3

Q ss_pred             EEEecCCCchHHHHHHHHHHcC-C-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           15 ALITGGARGIGECTARLFSKHG-A-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g-~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |+|.|+ |.+|+.+++.|++.+ . +|++.+|+.+++++..+++.     ..++.++++|+.|.+++.++++       .
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~l~~~~~-------~   67 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLL-----GDRVEAVQVDVNDPESLAELLR-------G   67 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--T-----TTTEEEEE--TTTHHHHHHHHT-------T
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhcc-----ccceeEEEEecCCHHHHHHHHh-------c
Confidence            689999 999999999999997 4 79999999999888877652     1348999999999999888876       4


Q ss_pred             ccEEEeCCCCC
Q 044485           93 LDIMFNNAGTV  103 (257)
Q Consensus        93 id~lv~~ag~~  103 (257)
                      .|++|||+|..
T Consensus        68 ~dvVin~~gp~   78 (386)
T PF03435_consen   68 CDVVINCAGPF   78 (386)
T ss_dssp             SSEEEE-SSGG
T ss_pred             CCEEEECCccc
Confidence            69999999854

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.19  E-value=6.3e-06  Score=69.24  Aligned_cols=83  Identities=14%  Similarity=0.242  Sum_probs=70.3

Q ss_pred             EEEEecCCCchHHHHHHHHHH----cCCeEEEeeCcchhhHhHHHHhccCCCC--CCCceeEecCCCCHHHHHHHHHHHH
Q 044485           14 VALITGGARGIGECTARLFSK----HGAKVLIADIKDDLGESVCKDIGSSSSS--ASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~----~g~~Vi~~~r~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      -++|-||||..|.-++.++..    .|..+-+.+|+++++++..+++.+..+.  ...+ ++.||.+|++++.+++++  
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~--   83 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQ--   83 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhh--
Confidence            479999999999999999999    7788999999999999999888765433  2324 899999999999999885  


Q ss_pred             HHcCCccEEEeCCCCCC
Q 044485           88 TQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~  104 (257)
                           -.+|+||+|...
T Consensus        84 -----~~vivN~vGPyR   95 (423)
T KOG2733|consen   84 -----ARVIVNCVGPYR   95 (423)
T ss_pred             -----hEEEEeccccce
Confidence                 459999999654

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.18  E-value=1.1e-05  Score=68.91  Aligned_cols=75  Identities=17%  Similarity=0.296  Sum_probs=55.9

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHc-C-CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKH-G-AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~-g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      .++++|+++||||+|.||+.++++|+++ | .+|+++.|+.+.+.++.+++..            .|+.   ++.     
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~------------~~i~---~l~-----  210 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG------------GKIL---SLE-----  210 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc------------ccHH---hHH-----
Confidence            4789999999999999999999999865 6 4799999998877776665421            1221   122     


Q ss_pred             HHHHcCCccEEEeCCCCCC
Q 044485           86 AVTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~  104 (257)
                        +.+...|++|++++...
T Consensus       211 --~~l~~aDiVv~~ts~~~  227 (340)
T PRK14982        211 --EALPEADIVVWVASMPK  227 (340)
T ss_pred             --HHHccCCEEEECCcCCc
Confidence              22346999999998653

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.97  E-value=8.1e-05  Score=64.66  Aligned_cols=168  Identities=14%  Similarity=0.082  Sum_probs=90.1

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .+-.+|+|+||+|++|+-+++.|.++|+.|.++-|+.+..++...+.....    ....+..|...+.++..-+-   +.
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~----~~~~v~~~~~~~~d~~~~~~---~~  149 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDL----GLQNVEADVVTAIDILKKLV---EA  149 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhccccccc----ccceeeeccccccchhhhhh---hh
Confidence            445799999999999999999999999999999999887766655111111    12334444444444333222   22


Q ss_pred             cC-CccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhhccccCCCCchhhhhHHHHHHH-H-HH
Q 044485           90 YG-KLDIMFNNAGTVDEV--KPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGL-M-KN  164 (257)
Q Consensus        90 ~~-~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~~~~~~~~~~~y~~sK~a~~~~-~-~~  164 (257)
                      .+ ...+++-|+|.....  ...-+..+++.....++..-.+-+.=..+++++.+.   .....|.........+ . +.
T Consensus       150 ~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~---~~~~~~~~~~~~~~~~~~k~~  226 (411)
T KOG1203|consen  150 VPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGT---KFNQPPNILLLNGLVLKAKLK  226 (411)
T ss_pred             ccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCc---ccCCCchhhhhhhhhhHHHHh
Confidence            11 355777777754431  123334555554444433200000000000122222   2222333333221222 2 23


Q ss_pred             HHHHhccCCcEEEeecCCCccCh
Q 044485          165 TAVELGRFGIRVNCVSPYAVSTP  187 (257)
Q Consensus       165 l~~e~~~~gi~v~~i~pg~v~t~  187 (257)
                      ..++++..|+.-..|.||....+
T Consensus       227 ~e~~~~~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  227 AEKFLQDSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             HHHHHHhcCCCcEEEeccccccC
Confidence            44455678999999999987654

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.93  E-value=3.4e-05  Score=59.14  Aligned_cols=73  Identities=14%  Similarity=0.111  Sum_probs=61.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +++.|.||||-.|..|+++...+|..|+++.|+..++...           ..+..++.|+.|+.++.+.+.       +
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-----------~~~~i~q~Difd~~~~a~~l~-------g   62 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-----------QGVTILQKDIFDLTSLASDLA-------G   62 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-----------ccceeecccccChhhhHhhhc-------C
Confidence            3688999999999999999999999999999998765443           116678999999999877665       7


Q ss_pred             ccEEEeCCCCC
Q 044485           93 LDIMFNNAGTV  103 (257)
Q Consensus        93 id~lv~~ag~~  103 (257)
                      .|+||..-+..
T Consensus        63 ~DaVIsA~~~~   73 (211)
T COG2910          63 HDAVISAFGAG   73 (211)
T ss_pred             CceEEEeccCC
Confidence            99999988865

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.84  E-value=9e-05  Score=56.23  Aligned_cols=76  Identities=20%  Similarity=0.353  Sum_probs=56.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcC-CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++++++++|+|+ |++|.++++.|++.| .+|++++|+.+..++..+++....        +..+..+.++.        
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~~--------   78 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG--------IAIAYLDLEEL--------   78 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc--------cceeecchhhc--------
Confidence            467899999998 899999999999996 779999999888777776653210        12233333322        


Q ss_pred             HHcCCccEEEeCCCCC
Q 044485           88 TQYGKLDIMFNNAGTV  103 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~  103 (257)
                        ....|+||++....
T Consensus        79 --~~~~Dvvi~~~~~~   92 (155)
T cd01065          79 --LAEADLIINTTPVG   92 (155)
T ss_pred             --cccCCEEEeCcCCC
Confidence              24699999999754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.82  E-value=9.4e-05  Score=61.95  Aligned_cols=48  Identities=27%  Similarity=0.365  Sum_probs=43.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcC-CeEEEeeCcchhhHhHHHHhc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDIG   57 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~   57 (257)
                      ++.+|+++|+|+ ||+|++++..|+..| .+|++++|+.++.+++.+++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            578899999997 999999999999999 689999999988888877764

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.75  E-value=0.00017  Score=60.17  Aligned_cols=75  Identities=17%  Similarity=0.245  Sum_probs=55.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..+|+++|+|+ ||+|++++..|++.|+.|++++|+.++.+++.+++...+    .+.....|     ..         .
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~----~~~~~~~~-----~~---------~  175 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG----EIQAFSMD-----EL---------P  175 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC----ceEEechh-----hh---------c
Confidence            45789999999 699999999999999999999999888888877764321    02222111     10         1


Q ss_pred             cCCccEEEeCCCCC
Q 044485           90 YGKLDIMFNNAGTV  103 (257)
Q Consensus        90 ~~~id~lv~~ag~~  103 (257)
                      ....|+|||+.+..
T Consensus       176 ~~~~DivInatp~g  189 (270)
T TIGR00507       176 LHRVDLIINATSAG  189 (270)
T ss_pred             ccCccEEEECCCCC
Confidence            13589999999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.75  E-value=0.00012  Score=65.56  Aligned_cols=80  Identities=23%  Similarity=0.303  Sum_probs=53.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.+|+++|||+++ +|.++|+.|++.|++|++.+++........+++...+     +.+....  +...+   ..    
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g-----~~~~~~~--~~~~~---~~----   66 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEG-----IKVICGS--HPLEL---LD----   66 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcC-----CEEEeCC--CCHHH---hc----
Confidence            46789999999976 9999999999999999999877644333334443322     3332221  12211   11    


Q ss_pred             HcCCccEEEeCCCCCCC
Q 044485           89 QYGKLDIMFNNAGTVDE  105 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~  105 (257)
                        .++|.||+++|+...
T Consensus        67 --~~~d~vV~s~gi~~~   81 (447)
T PRK02472         67 --EDFDLMVKNPGIPYT   81 (447)
T ss_pred             --CcCCEEEECCCCCCC
Confidence              148999999998643

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.73  E-value=7.9e-05  Score=59.39  Aligned_cols=139  Identities=19%  Similarity=0.231  Sum_probs=87.5

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHc-CCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKH-GAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~-g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      .+....++||||+-|.+|..+|.-|..+ |-. |++.+-..+....+     ..      --++-.|+.|.+++++++-.
T Consensus        40 ~~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~-----~~------GPyIy~DILD~K~L~eIVVn  108 (366)
T KOG2774|consen   40 QTQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT-----DV------GPYIYLDILDQKSLEEIVVN  108 (366)
T ss_pred             ccCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc-----cc------CCchhhhhhccccHHHhhcc
Confidence            3556678999999999999999999765 765 77665433221111     01      13456899999998887643


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccc-------cCCC--
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGII-------GGAA--  147 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~-------~~~~--  147 (257)
                           .+||.+||-.+.....+       +...--...+|+.|..++.....         |..|..       |.+.  
T Consensus       109 -----~RIdWL~HfSALLSAvG-------E~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdlt  176 (366)
T KOG2774|consen  109 -----KRIDWLVHFSALLSAVG-------ETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLT  176 (366)
T ss_pred             -----cccceeeeHHHHHHHhc-------ccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCee
Confidence                 37999999776543311       11122345678888777654441         222222       2222  


Q ss_pred             ----CchhhhhHHHHHHHHHHHHHHh
Q 044485          148 ----THAYTSSKHGLLGLMKNTAVEL  169 (257)
Q Consensus       148 ----~~~y~~sK~a~~~~~~~l~~e~  169 (257)
                          ...|+.||.-.+.+-+.+...+
T Consensus       177 IQRPRTIYGVSKVHAEL~GEy~~hrF  202 (366)
T KOG2774|consen  177 IQRPRTIYGVSKVHAELLGEYFNHRF  202 (366)
T ss_pred             eecCceeechhHHHHHHHHHHHHhhc
Confidence                1369999998888777666554

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.73  E-value=4.9e-05  Score=59.45  Aligned_cols=78  Identities=26%  Similarity=0.325  Sum_probs=46.5

Q ss_pred             cCCcEEEEecC----------------CCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCC
Q 044485           10 LQGKVALITGG----------------ARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDV   73 (257)
Q Consensus        10 ~~~k~~lItGa----------------s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~   73 (257)
                      |.||++|||+|                ||-.|.++|+.+..+|++|+++..... +..         +.  .+..  .++
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~---------p~--~~~~--i~v   66 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP---------PP--GVKV--IRV   66 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------T--TEEE--EE-
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc---------cc--cceE--EEe
Confidence            46889999976                578999999999999999999877632 110         10  1333  344


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEeCCCCCC
Q 044485           74 TKEKDIENAVNTAVTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        74 ~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~  104 (257)
                      .+.++..+.+   .+.+..-|++|++|++..
T Consensus        67 ~sa~em~~~~---~~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   67 ESAEEMLEAV---KELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             SSHHHHHHHH---HHHGGGGSEEEE-SB--S
T ss_pred             cchhhhhhhh---ccccCcceeEEEecchhh
Confidence            4555554444   444445699999999864

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.67  E-value=8e-05  Score=59.18  Aligned_cols=49  Identities=24%  Similarity=0.368  Sum_probs=42.4

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHh
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI   56 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~   56 (257)
                      ..+++||+++|+|.+ .+|.++++.|.+.|++|++.+++.+.+++..+++
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~   71 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF   71 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            457899999999995 8999999999999999999999887776665543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.57  E-value=0.00046  Score=59.10  Aligned_cols=77  Identities=23%  Similarity=0.400  Sum_probs=53.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      |+++||+||+||+|...++-..+.|+.++++..+.++.+ .++++...         +..|..+.+    +.+++++..+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd---------~vi~y~~~~----~~~~v~~~t~  208 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGAD---------HVINYREED----FVEQVRELTG  208 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCC---------EEEcCCccc----HHHHHHHHcC
Confidence            899999999999999999999999987766666666555 44444211         123444444    3344443332


Q ss_pred             --CccEEEeCCCC
Q 044485           92 --KLDIMFNNAGT  102 (257)
Q Consensus        92 --~id~lv~~ag~  102 (257)
                        ++|+++...|.
T Consensus       209 g~gvDvv~D~vG~  221 (326)
T COG0604         209 GKGVDVVLDTVGG  221 (326)
T ss_pred             CCCceEEEECCCH
Confidence              59999999984

>PLN00106 malate dehydrogenase

Probab=97.55  E-value=0.00048  Score=58.70  Aligned_cols=137  Identities=14%  Similarity=0.110  Sum_probs=83.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .++|.|||++|.+|.+++..|+..+.  .+++.+.++... +. .++.....   ..  ...++++.++..+.+      
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g-~a-~Dl~~~~~---~~--~i~~~~~~~d~~~~l------   84 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPG-VA-ADVSHINT---PA--QVRGFLGDDQLGDAL------   84 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCe-eE-chhhhCCc---Cc--eEEEEeCCCCHHHHc------
Confidence            46899999999999999999998774  599999877211 11 12221111   01  122333333333323      


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------h------h-----hccccC
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------G------V-----CGIIGG  145 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s------~-----~~~~~~  145 (257)
                       .+.|++|+.||.....     ..+   +...+..|+.....+...+.             +      .     ....+.
T Consensus        85 -~~aDiVVitAG~~~~~-----g~~---R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~  155 (323)
T PLN00106         85 -KGADLVIIPAGVPRKP-----GMT---RDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVY  155 (323)
T ss_pred             -CCCCEEEEeCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCC
Confidence             3799999999975431     222   45566677766666544441             0      1     122344


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhc
Q 044485          146 AATHAYTSSKHGLLGLMKNTAVELG  170 (257)
Q Consensus       146 ~~~~~y~~sK~a~~~~~~~l~~e~~  170 (257)
                      ++...|+.++.-...|-..+++++.
T Consensus       156 p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        156 DPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             CcceEEEEecchHHHHHHHHHHHhC
Confidence            5566788888777778888888874

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.54  E-value=0.00037  Score=59.88  Aligned_cols=82  Identities=18%  Similarity=0.345  Sum_probs=55.5

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..|.++||+|++|++|..+++.+...|++|+.+.++.++.+.+.+.+...       .+  .|..+.++..+.+.+... 
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~-------~v--i~~~~~~~~~~~i~~~~~-  219 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFD-------DA--FNYKEEPDLDAALKRYFP-  219 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCc-------ee--EEcCCcccHHHHHHHhCC-
Confidence            35789999999999999999999999999999988887765554434210       11  232222233333333321 


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                       +++|+++.+.|.
T Consensus       220 -~gvd~v~d~~g~  231 (338)
T cd08295         220 -NGIDIYFDNVGG  231 (338)
T ss_pred             -CCcEEEEECCCH
Confidence             469999998873

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK06849 hypothetical protein; Provisional

Probab=97.52  E-value=0.00093  Score=58.72  Aligned_cols=82  Identities=20%  Similarity=0.205  Sum_probs=55.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      .|+|||||++..+|.++++.|.+.|++|++++.+..........+..       ...+...-.+.+...+.+.++.+++ 
T Consensus         4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~-------~~~~p~p~~d~~~~~~~L~~i~~~~-   75 (389)
T PRK06849          4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVDG-------FYTIPSPRWDPDAYIQALLSIVQRE-   75 (389)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhh-------eEEeCCCCCCHHHHHHHHHHHHHHc-
Confidence            58999999999999999999999999999998876544322222211       2222223345555545555555554 


Q ss_pred             CccEEEeCCC
Q 044485           92 KLDIMFNNAG  101 (257)
Q Consensus        92 ~id~lv~~ag  101 (257)
                      ++|+||-...
T Consensus        76 ~id~vIP~~e   85 (389)
T PRK06849         76 NIDLLIPTCE   85 (389)
T ss_pred             CCCEEEECCh
Confidence            4899998765

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.52  E-value=0.0013  Score=57.34  Aligned_cols=77  Identities=25%  Similarity=0.336  Sum_probs=56.2

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +.+++++|.|+ |.+|...++.+...|++|++++|+.+.++.+.+....         .+..+..+.+.+.+.+      
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~---------~v~~~~~~~~~l~~~l------  228 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG---------RIHTRYSNAYEIEDAV------  228 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc---------eeEeccCCHHHHHHHH------
Confidence            56788999988 7999999999999999999999988776665444321         1223445555554443      


Q ss_pred             cCCccEEEeCCCCC
Q 044485           90 YGKLDIMFNNAGTV  103 (257)
Q Consensus        90 ~~~id~lv~~ag~~  103 (257)
                       ...|++|++++..
T Consensus       229 -~~aDvVI~a~~~~  241 (370)
T TIGR00518       229 -KRADLLIGAVLIP  241 (370)
T ss_pred             -ccCCEEEEccccC
Confidence             2589999998654

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.46  E-value=0.00055  Score=59.21  Aligned_cols=81  Identities=19%  Similarity=0.323  Sum_probs=54.7

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..|.++||+|++|++|..+++.+...|++|+.++++.++.+.+.+++..       -.+  .|..+.+.+.+.+.+... 
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa-------~~v--i~~~~~~~~~~~i~~~~~-  226 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF-------DEA--FNYKEEPDLDAALKRYFP-  226 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCC-------CEE--EECCCcccHHHHHHHHCC-
Confidence            3578999999999999999999999999999988887766555434421       011  233222233333333321 


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                       +++|+++.+.|
T Consensus       227 -~gvD~v~d~vG  237 (348)
T PLN03154        227 -EGIDIYFDNVG  237 (348)
T ss_pred             -CCcEEEEECCC
Confidence             36999999988

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.45  E-value=0.00052  Score=57.48  Aligned_cols=77  Identities=13%  Similarity=0.213  Sum_probs=60.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      ..++|.||+|..|.-++++|+++|.+-.+.+|+..+++.+.+.+...      .-.  .++-++..+++++.       +
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~------~~~--~p~~~p~~~~~~~~-------~   71 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPE------AAV--FPLGVPAALEAMAS-------R   71 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcc------ccc--cCCCCHHHHHHHHh-------c
Confidence            57899999999999999999999999999999999999888877422      222  33434555555544       6


Q ss_pred             ccEEEeCCCCCC
Q 044485           93 LDIMFNNAGTVD  104 (257)
Q Consensus        93 id~lv~~ag~~~  104 (257)
                      .++|+||+|...
T Consensus        72 ~~VVlncvGPyt   83 (382)
T COG3268          72 TQVVLNCVGPYT   83 (382)
T ss_pred             ceEEEecccccc
Confidence            889999999654

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.45  E-value=0.00082  Score=57.79  Aligned_cols=83  Identities=23%  Similarity=0.333  Sum_probs=58.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcc---------------------hhhHhHHHHhccCCCCCCCc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKD---------------------DLGESVCKDIGSSSSSASGC   66 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~---------------------~~~~~~~~~~~~~~~~~~~v   66 (257)
                      .+++++|+|.|+ ||+|.++++.|++.|. ++++++++.                     .+.+.+.+.+.+..+ ..++
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp-~v~i   98 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINS-EVEI   98 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCC-CcEE
Confidence            578899999997 8899999999999998 589898864                     233444455554433 3457


Q ss_pred             eeEecCCCCHHHHHHHHHHHHHHcCCccEEEeCCC
Q 044485           67 SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        67 ~~~~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag  101 (257)
                      ..+..|++ .+.+++++       ...|++|.+..
T Consensus        99 ~~~~~~~~-~~~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475         99 VPVVTDVT-VEELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             EEEeccCC-HHHHHHHh-------cCCCEEEEcCC
Confidence            77777775 33444443       25788888775

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.44  E-value=0.00076  Score=57.47  Aligned_cols=81  Identities=20%  Similarity=0.336  Sum_probs=57.6

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..+++++|+|+++++|.++++.+...|++|++++++.+..+.+ ...   +     .. ...|..+.+..+.+.+.... 
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---~-----~~-~~~~~~~~~~~~~~~~~~~~-  233 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL---G-----AD-YVIDYRKEDFVREVRELTGK-  233 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---C-----CC-eEEecCChHHHHHHHHHhCC-
Confidence            3578999999999999999999999999999999887665544 222   1     11 12456665555554433321 


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                       +++|++++++|.
T Consensus       234 -~~~d~~i~~~g~  245 (342)
T cd08266         234 -RGVDVVVEHVGA  245 (342)
T ss_pred             -CCCcEEEECCcH
Confidence             369999999873

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.44  E-value=0.00047  Score=56.83  Aligned_cols=75  Identities=13%  Similarity=0.225  Sum_probs=55.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +++||+|||+- |+.++++|.++|+.|+...++....+...+    .+     ...+..+..|.+++..++.+     .+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~g-----~~~v~~g~l~~~~l~~~l~~-----~~   65 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----HQ-----ALTVHTGALDPQELREFLKR-----HS   65 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----cC-----CceEEECCCCHHHHHHHHHh-----cC
Confidence            37999999998 999999999999999998888764433321    11     23455667778777666654     26


Q ss_pred             ccEEEeCCCC
Q 044485           93 LDIMFNNAGT  102 (257)
Q Consensus        93 id~lv~~ag~  102 (257)
                      +|+||+.+..
T Consensus        66 i~~VIDAtHP   75 (256)
T TIGR00715        66 IDILVDATHP   75 (256)
T ss_pred             CCEEEEcCCH
Confidence            9999998874

This enzyme was found to be a monomer by gel filtration.

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.39  E-value=0.00073  Score=58.08  Aligned_cols=78  Identities=14%  Similarity=0.269  Sum_probs=53.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      .++||+|++|++|.++++.....|+ +|+.+++++++.+.+.+++..     .  .+  .|..+ +++.+.+.++..  +
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa-----~--~v--i~~~~-~~~~~~i~~~~~--~  223 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGF-----D--AA--INYKT-DNVAERLRELCP--E  223 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCC-----c--EE--EECCC-CCHHHHHHHHCC--C
Confidence            7999999999999999998888999 799998888776665554421     0  11  23322 223333333322  3


Q ss_pred             CccEEEeCCCC
Q 044485           92 KLDIMFNNAGT  102 (257)
Q Consensus        92 ~id~lv~~ag~  102 (257)
                      ++|+++++.|.
T Consensus       224 gvd~vid~~g~  234 (345)
T cd08293         224 GVDVYFDNVGG  234 (345)
T ss_pred             CceEEEECCCc
Confidence            69999998873

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.38  E-value=0.00075  Score=57.64  Aligned_cols=80  Identities=23%  Similarity=0.370  Sum_probs=54.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|.++||+|++|++|..+++.+...|++|+.+.++.++.+.+ +++.        +. ...|..+.+...+.++....  
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lG--------a~-~vi~~~~~~~~~~~~~~~~~--  205 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLG--------FD-VAFNYKTVKSLEETLKKASP--  205 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC--------CC-EEEeccccccHHHHHHHhCC--
Confidence            578999999999999999999989999999998887765555 3332        11 11233333334343333321  


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                      +++|+++.+.|.
T Consensus       206 ~gvdvv~d~~G~  217 (325)
T TIGR02825       206 DGYDCYFDNVGG  217 (325)
T ss_pred             CCeEEEEECCCH
Confidence            369999998873

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.37  E-value=0.00036  Score=63.63  Aligned_cols=47  Identities=26%  Similarity=0.424  Sum_probs=42.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHh
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI   56 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~   56 (257)
                      ++.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            577899999999 69999999999999999999999988877776665

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.37  E-value=0.0007  Score=57.14  Aligned_cols=81  Identities=19%  Similarity=0.302  Sum_probs=56.0

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..+++++|+|+++++|.++++.+...|++|++++++.+..+... ++.        +. ..+|..+.+..+.+.+ ....
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g--------~~-~~~~~~~~~~~~~~~~-~~~~  211 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAG--------AD-AVFNYRAEDLADRILA-ATAG  211 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcC--------CC-EEEeCCCcCHHHHHHH-HcCC
Confidence            36789999999999999999999999999999998876655442 221        11 1244555444444332 2211


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                       .++|.++++++.
T Consensus       212 -~~~d~vi~~~~~  223 (325)
T cd08253         212 -QGVDVIIEVLAN  223 (325)
T ss_pred             -CceEEEEECCch
Confidence             369999999874

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.37  E-value=0.00087  Score=59.16  Aligned_cols=77  Identities=16%  Similarity=0.237  Sum_probs=56.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++.+++++|.|+ ||+|+.+++.|+..|+ +++++.|+.++.+++.+++..       ...+     ..+++...    
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~-------~~~~-----~~~~l~~~----  239 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN-------ASAH-----YLSELPQL----  239 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC-------CeEe-----cHHHHHHH----
Confidence            3688999999998 9999999999999996 599999998887777776531       1111     12222222    


Q ss_pred             HHHcCCccEEEeCCCCCC
Q 044485           87 VTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~  104 (257)
                         ....|+||++.+...
T Consensus       240 ---l~~aDiVI~aT~a~~  254 (414)
T PRK13940        240 ---IKKADIIIAAVNVLE  254 (414)
T ss_pred             ---hccCCEEEECcCCCC
Confidence               236899999988654

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.36  E-value=0.00078  Score=56.51  Aligned_cols=48  Identities=15%  Similarity=0.165  Sum_probs=41.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIG   57 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~   57 (257)
                      ++++|+++|.|+ ||.+++++..|++.|+ +|+++.|+.++.+++.+++.
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            467899999987 9999999999999997 59999999988888877653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.34  E-value=0.0011  Score=55.82  Aligned_cols=81  Identities=25%  Similarity=0.395  Sum_probs=55.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..+++++|+|+++++|.++++.+...|++|++++++.+..+.+ +++.        +. ...|..+.+..+.+.+ ... 
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g--------~~-~~~~~~~~~~~~~~~~-~~~-  205 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALG--------AD-VAINYRTEDFAEEVKE-ATG-  205 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcC--------CC-EEEeCCchhHHHHHHH-HhC-
Confidence            3678999999999999999999999999999999887665544 3331        11 1234444333333222 221 


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      .+++|.+++++|.
T Consensus       206 ~~~~d~vi~~~g~  218 (323)
T cd05276         206 GRGVDVILDMVGG  218 (323)
T ss_pred             CCCeEEEEECCch
Confidence            1369999999883

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.34  E-value=0.00063  Score=58.20  Aligned_cols=35  Identities=23%  Similarity=0.240  Sum_probs=30.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcC-------CeEEEeeCcch
Q 044485           13 KVALITGGARGIGECTARLFSKHG-------AKVLIADIKDD   47 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g-------~~Vi~~~r~~~   47 (257)
                      -+++||||+|.+|.+++..|+..+       .+|++.++++.
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~   44 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPA   44 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCc
Confidence            368999999999999999999855       57999998653

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.31  E-value=0.0012  Score=55.58  Aligned_cols=43  Identities=23%  Similarity=0.269  Sum_probs=38.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHh
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGES   51 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~   51 (257)
                      .++++++++|.|. |++|+++++.|...|++|++.+|+.+..+.
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            4788999999999 779999999999999999999998765444

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.31  E-value=0.0016  Score=54.69  Aligned_cols=49  Identities=14%  Similarity=0.268  Sum_probs=43.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhcc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGS   58 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~   58 (257)
                      ++.+|+++|.|+ ||.|++++..|+..|+ +|++++|+.++.+++.+++..
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~  173 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNA  173 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHh
Confidence            467899999998 8899999999999998 599999999988888877744

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.30  E-value=0.0017  Score=51.70  Aligned_cols=37  Identities=30%  Similarity=0.478  Sum_probs=32.9

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCc
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIK   45 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~   45 (257)
                      ..+.+++++|.|+ ||+|..+++.|+..|. ++++++.+
T Consensus        17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence            3678899999995 8999999999999997 59999877

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.30  E-value=0.00089  Score=60.33  Aligned_cols=47  Identities=21%  Similarity=0.343  Sum_probs=40.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHh
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI   56 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~   56 (257)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..++.
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            567899999996 79999999999999999999999987777666554

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.26  E-value=0.0048  Score=52.62  Aligned_cols=135  Identities=15%  Similarity=0.070  Sum_probs=78.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcC--CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHG--AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +.+++.|+|++|.+|..++..|+.++  ..+++++++..  +....++.....     .+...+.+|+.+..+.+     
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~--~g~a~Dl~~~~~-----~~~v~~~td~~~~~~~l-----   74 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGA--PGVAADLSHIDT-----PAKVTGYADGELWEKAL-----   74 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCC--cccccchhhcCc-----CceEEEecCCCchHHHh-----
Confidence            34699999999999999999999766  46999998321  111112221111     12234555544322222     


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-------------------Hhh-----hcccc
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-------------------LGV-----CGIIG  144 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-------------------~s~-----~~~~~  144 (257)
                        .+.|++|+++|.....     ..+   +...+..|+...-.+...+                   ...     ....+
T Consensus        75 --~gaDvVVitaG~~~~~-----~~t---R~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg  144 (321)
T PTZ00325         75 --RGADLVLICAGVPRKP-----GMT---RDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGV  144 (321)
T ss_pred             --CCCCEEEECCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccC
Confidence              3799999999975321     122   4555666666665554333                   111     13344


Q ss_pred             CCCCchhhhhHHHHH--HHHHHHHHHh
Q 044485          145 GAATHAYTSSKHGLL--GLMKNTAVEL  169 (257)
Q Consensus       145 ~~~~~~y~~sK~a~~--~~~~~l~~e~  169 (257)
                      .++...|+.+-  |+  .|-..+++.+
T Consensus       145 ~p~~~viG~g~--LDs~R~r~~la~~l  169 (321)
T PTZ00325        145 YDPRKLFGVTT--LDVVRARKFVAEAL  169 (321)
T ss_pred             CChhheeechh--HHHHHHHHHHHHHh
Confidence            56666788762  55  4556666665

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.25  E-value=0.0013  Score=54.94  Aligned_cols=79  Identities=18%  Similarity=0.300  Sum_probs=57.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +..+++++|.|| ||.+++++..|++.|+ +++++.|+.++.+++.+.......     .....+..+.+...       
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-----~~~~~~~~~~~~~~-------  189 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-----AVEAAALADLEGLE-------  189 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-----cccccccccccccc-------
Confidence            456899999998 8999999999999995 699999999999888888765431     11112222222111       


Q ss_pred             HHcCCccEEEeCCCCCC
Q 044485           88 TQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~  104 (257)
                          ..|+|||+....-
T Consensus       190 ----~~dliINaTp~Gm  202 (283)
T COG0169         190 ----EADLLINATPVGM  202 (283)
T ss_pred             ----ccCEEEECCCCCC
Confidence                3899999987643

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.25  E-value=0.0016  Score=56.16  Aligned_cols=81  Identities=21%  Similarity=0.345  Sum_probs=55.6

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -.|+.+||.||+||+|.+.++-....|+..+++.++.+.. ++.+++...         ...|..+++-++++.+ ..  
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~lGAd---------~vvdy~~~~~~e~~kk-~~--  222 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKLGAD---------EVVDYKDENVVELIKK-YT--  222 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHcCCc---------EeecCCCHHHHHHHHh-hc--
Confidence            4678999999999999999999999996555555555543 344444321         2357777444443332 22  


Q ss_pred             cCCccEEEeCCCCC
Q 044485           90 YGKLDIMFNNAGTV  103 (257)
Q Consensus        90 ~~~id~lv~~ag~~  103 (257)
                      .+++|+|+.|.|..
T Consensus       223 ~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  223 GKGVDVVLDCVGGS  236 (347)
T ss_pred             CCCccEEEECCCCC
Confidence            46899999999963

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.24  E-value=0.0018  Score=55.10  Aligned_cols=43  Identities=23%  Similarity=0.370  Sum_probs=37.0

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      ..+.+++|+|+++++|.++++.+...|++|+++.++.+..+.+
T Consensus       161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~  203 (332)
T cd08259         161 KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL  203 (332)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            3578999999999999999999999999999998877654444

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.23  E-value=0.002  Score=53.96  Aligned_cols=48  Identities=21%  Similarity=0.387  Sum_probs=42.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIG   57 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~   57 (257)
                      ++++|+++|.|+ ||-+++++..|++.|+ +++++.|+.++.+++.+.+.
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~  172 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVIN  172 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence            467899999998 9999999999999997 58999999988888877764

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.19  E-value=0.0016  Score=52.77  Aligned_cols=74  Identities=24%  Similarity=0.342  Sum_probs=58.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHH-HhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK-DIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      |.++|.|+ |-+|..+|+.|.++|.+|++++++++..++... ++        .++.+.+|-++++-++++=      ..
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~--------~~~~v~gd~t~~~~L~~ag------i~   65 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADEL--------DTHVVIGDATDEDVLEEAG------ID   65 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhc--------ceEEEEecCCCHHHHHhcC------CC
Confidence            36777777 889999999999999999999999988766433 23        2788999999998777651      12


Q ss_pred             CccEEEeCCC
Q 044485           92 KLDIMFNNAG  101 (257)
Q Consensus        92 ~id~lv~~ag  101 (257)
                      ..|++|-..+
T Consensus        66 ~aD~vva~t~   75 (225)
T COG0569          66 DADAVVAATG   75 (225)
T ss_pred             cCCEEEEeeC
Confidence            5788887776

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.18  E-value=0.0025  Score=54.85  Aligned_cols=83  Identities=24%  Similarity=0.368  Sum_probs=56.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcc---------------------hhhHhHHHHhccCCCCCCCc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKD---------------------DLGESVCKDIGSSSSSASGC   66 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~---------------------~~~~~~~~~~~~~~~~~~~v   66 (257)
                      .+.+++|+|.|+ ||+|..+++.|++.|. ++++++++.                     .+.+.+.+.+++..+ ..++
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp-~v~v   98 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINS-DVRV   98 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCC-CcEE
Confidence            577899999998 8999999999999998 699998863                     222333344443332 3346


Q ss_pred             eeEecCCCCHHHHHHHHHHHHHHcCCccEEEeCCC
Q 044485           67 SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        67 ~~~~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag  101 (257)
                      ..+..+++ ++.+..+++       ..|++|.+..
T Consensus        99 ~~~~~~~~-~~~~~~~~~-------~~DlVid~~D  125 (339)
T PRK07688         99 EAIVQDVT-AEELEELVT-------GVDLIIDATD  125 (339)
T ss_pred             EEEeccCC-HHHHHHHHc-------CCCEEEEcCC
Confidence            66666765 334444332       5788887754

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=97.17  E-value=0.0006  Score=44.37  Aligned_cols=36  Identities=28%  Similarity=0.456  Sum_probs=24.4

Q ss_pred             CC-cEEEEecCCCchHHH--HHHHHHHcCCeEEEeeCcch
Q 044485           11 QG-KVALITGGARGIGEC--TARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        11 ~~-k~~lItGas~giG~~--ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      +| |++||+|+|+|.|.+  |+..| ..|++.+-++...+
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk~   75 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEKP   75 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE----
T ss_pred             CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeeccC
Confidence            44 899999999999999  66666 67888888776543

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.17  E-value=0.002  Score=54.92  Aligned_cols=73  Identities=18%  Similarity=0.238  Sum_probs=55.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|++++|+|++ |+|...++.....|++|+.++|++++++...+.-.        -+  ..|.+|++..+.+-+      
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGA--------d~--~i~~~~~~~~~~~~~------  228 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGA--------DH--VINSSDSDALEAVKE------  228 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCC--------cE--EEEcCCchhhHHhHh------
Confidence            58999999998 99999999999999999999999988766654321        11  234445655555433      


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                       .+|+++.+++
T Consensus       229 -~~d~ii~tv~  238 (339)
T COG1064         229 -IADAIIDTVG  238 (339)
T ss_pred             -hCcEEEECCC
Confidence             2999999998

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.14  E-value=0.0031  Score=53.04  Aligned_cols=48  Identities=13%  Similarity=0.286  Sum_probs=38.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcch---hhHhHHHHhc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDD---LGESVCKDIG   57 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~---~~~~~~~~~~   57 (257)
                      ++++|+++|.|+ ||-+++++..|+..|+ +|+++.|+.+   +.+++.+++.
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            568899999997 7779999999999997 5999999854   5566666553

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.10  E-value=0.0011  Score=59.11  Aligned_cols=78  Identities=23%  Similarity=0.260  Sum_probs=54.1

Q ss_pred             ccCCcEEEEecC----------------CCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecC
Q 044485            9 RLQGKVALITGG----------------ARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD   72 (257)
Q Consensus         9 ~~~~k~~lItGa----------------s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D   72 (257)
                      +|.||++|||+|                ||-.|.+||+.++.+|++|++++-... +       .  .+.  .+..+.+ 
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~-------~--~p~--~v~~i~V-  319 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L-------A--DPQ--GVKVIHV-  319 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C-------C--CCC--CceEEEe-
Confidence            689999999986                578999999999999999999874321 1       0  111  1444433 


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEeCCCCCC
Q 044485           73 VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        73 ~~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~  104 (257)
                       .   +.+++.+.+.+.+. .|++|++|++..
T Consensus       320 -~---ta~eM~~av~~~~~-~Di~I~aAAVaD  346 (475)
T PRK13982        320 -E---SARQMLAAVEAALP-ADIAIFAAAVAD  346 (475)
T ss_pred             -c---CHHHHHHHHHhhCC-CCEEEEeccccc
Confidence             3   34444555555444 799999999754

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.10  E-value=0.0066  Score=54.88  Aligned_cols=86  Identities=20%  Similarity=0.248  Sum_probs=58.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCH------------
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKE------------   76 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~------------   76 (257)
                      ...+.+++|+|+ |.+|...++.+...|++|++++++++.++...+ +.        ..++..|..+.            
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lG--------A~~v~i~~~e~~~~~~gya~~~s  231 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MG--------AEFLELDFEEEGGSGDGYAKVMS  231 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC--------CeEEEeccccccccccchhhhcc
Confidence            356889999998 999999999999999999999999887665433 32        23333333221            


Q ss_pred             -HHHHHHHHHHHHHcCCccEEEeCCCCCC
Q 044485           77 -KDIENAVNTAVTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        77 -~~v~~~~~~~~~~~~~id~lv~~ag~~~  104 (257)
                       +..+...+.+.+..+..|++|.+++...
T Consensus       232 ~~~~~~~~~~~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        232 EEFIKAEMALFAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             hhHHHHHHHHHHhccCCCCEEEECCCCCc
Confidence             1122222222333356999999999754

>PRK04148 hypothetical protein; Provisional

Probab=97.07  E-value=0.0017  Score=47.77  Aligned_cols=56  Identities=18%  Similarity=0.086  Sum_probs=45.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEK   77 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   77 (257)
                      +++++++.|.+  .|.++|..|++.|++|++++.++...+++.+..         +.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~---------~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLG---------LNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhC---------CeEEECcCCCCC
Confidence            56789999986  888999999999999999999998766554432         677888888764

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.05  E-value=0.0035  Score=55.76  Aligned_cols=47  Identities=26%  Similarity=0.485  Sum_probs=40.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHh
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDI   56 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~   56 (257)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|++++|+.+..+++.+++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            478899999987 9999999999999997 6999999988776666654

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.01  E-value=0.0044  Score=50.86  Aligned_cols=79  Identities=27%  Similarity=0.378  Sum_probs=53.2

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..++++||+|+++ +|.++++.+...|.+|++++++++..+.. ++...       -.  ..|..+.+..+.+.   ...
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~-------~~--~~~~~~~~~~~~~~---~~~  198 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KELGA-------DH--VIDYKEEDLEEELR---LTG  198 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCC-------ce--eccCCcCCHHHHHH---Hhc
Confidence            4678999999988 99999999999999999999887655444 22210       11  12333333333332   222


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      .+++|+++++++.
T Consensus       199 ~~~~d~vi~~~~~  211 (271)
T cd05188         199 GGGADVVIDAVGG  211 (271)
T ss_pred             CCCCCEEEECCCC
Confidence            3479999999874

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.01  E-value=0.0031  Score=52.24  Aligned_cols=37  Identities=16%  Similarity=0.369  Sum_probs=31.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCc
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIK   45 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~   45 (257)
                      ..+.+.+|+|.|+ ||+|..+|..|++.|. ++++++.+
T Consensus        26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3578899999987 8999999999999995 58888765

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.00  E-value=0.0043  Score=55.07  Aligned_cols=47  Identities=34%  Similarity=0.581  Sum_probs=40.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcC-CeEEEeeCcchhhHhHHHHh
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDI   56 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~   56 (257)
                      ++.+++++|.|+ |.+|..+++.|...| .+|++++|+.+..++..+++
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~  224 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL  224 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            578899999997 999999999999999 67999999987776666554

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.97  E-value=0.0039  Score=54.54  Aligned_cols=36  Identities=28%  Similarity=0.392  Sum_probs=32.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIK   45 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~   45 (257)
                      .+.+++|+|.|+ ||+|..++..|+..|.. +++++++
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            577889999976 89999999999999985 8999887

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.95  E-value=0.0043  Score=52.85  Aligned_cols=80  Identities=20%  Similarity=0.276  Sum_probs=53.6

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..|.++||+|+++++|.++++.....|++|+.+.+++++.+.+.+ +..       -.+  .|..+++..++ +.+... 
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga-------~~v--i~~~~~~~~~~-v~~~~~-  209 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGF-------DAV--FNYKTVSLEEA-LKEAAP-  209 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCC-------CEE--EeCCCccHHHH-HHHHCC-
Confidence            357899999999999999999999999999999888776555433 321       111  23333322222 222221 


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                       +++|+++.+.|.
T Consensus       210 -~gvd~vld~~g~  221 (329)
T cd08294         210 -DGIDCYFDNVGG  221 (329)
T ss_pred             -CCcEEEEECCCH
Confidence             369999998873

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.94  E-value=0.0056  Score=52.12  Aligned_cols=80  Identities=18%  Similarity=0.304  Sum_probs=53.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+.++||.|+++++|.++++.+.+.|++|+.+.++.++.+.+.+.+..       -.+  .|..+.+..++ +.+...  
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~-------~~~--~~~~~~~~~~~-v~~~~~--  212 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGF-------DAA--INYKTPDLAEA-LKEAAP--  212 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCC-------ceE--EecCChhHHHH-HHHhcc--
Confidence            578999999999999999999999999999998887765544332321       011  22333332222 222221  


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                      +++|+++++.|.
T Consensus       213 ~~~d~vi~~~g~  224 (329)
T cd05288         213 DGIDVYFDNVGG  224 (329)
T ss_pred             CCceEEEEcchH
Confidence            469999999873

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.94  E-value=0.0044  Score=52.28  Aligned_cols=80  Identities=24%  Similarity=0.411  Sum_probs=52.7

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..+++++|+|+++++|.++++.+...|++|+++.++++..+.. .+..        +. ...+....+....+. +....
T Consensus       138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--------~~-~~~~~~~~~~~~~~~-~~~~~  206 (325)
T TIGR02824       138 KAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALG--------AD-IAINYREEDFVEVVK-AETGG  206 (325)
T ss_pred             CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC--------Cc-EEEecCchhHHHHHH-HHcCC
Confidence            3578999999999999999999999999999998887665433 3321        11 112333333322222 22111


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                       .++|.+++++|
T Consensus       207 -~~~d~~i~~~~  217 (325)
T TIGR02824       207 -KGVDVILDIVG  217 (325)
T ss_pred             -CCeEEEEECCc
Confidence             25999999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.94  E-value=0.0057  Score=49.63  Aligned_cols=83  Identities=13%  Similarity=0.250  Sum_probs=53.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc-------------------hhhHhHHHHhccCCCCCCCcee
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKD-------------------DLGESVCKDIGSSSSSASGCSY   68 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~v~~   68 (257)
                      .+.+++|+|.|+ ||+|..+++.|++.|.. +++++.+.                   .+.+.+.+.+++..+ ..++..
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~i~~   95 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINP-DVEIEA   95 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCC-CCEEEE
Confidence            577889999996 89999999999999975 77775432                   233334444444432 233555


Q ss_pred             EecCCCCHHHHHHHHHHHHHHcCCccEEEeCCC
Q 044485           69 VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        69 ~~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag  101 (257)
                      +..+++ .+.+.++++       ..|++|.+..
T Consensus        96 ~~~~i~-~~~~~~~~~-------~~DvVi~~~d  120 (228)
T cd00757          96 YNERLD-AENAEELIA-------GYDLVLDCTD  120 (228)
T ss_pred             ecceeC-HHHHHHHHh-------CCCEEEEcCC
Confidence            555553 333333332       5788888765

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.92  E-value=0.0054  Score=51.81  Aligned_cols=41  Identities=24%  Similarity=0.237  Sum_probs=36.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhh
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG   49 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~   49 (257)
                      .++.+++++|.|. |++|+.+++.|...|++|++++|+.+..
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~  188 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL  188 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            3578999999997 7799999999999999999999997653

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.91  E-value=0.0075  Score=49.52  Aligned_cols=37  Identities=19%  Similarity=0.438  Sum_probs=31.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKD   46 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   46 (257)
                      .+++++|+|.|+ ||+|..+++.|+..|.. +++++.+.
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~   66 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT   66 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            578899999998 99999999999999974 78876643

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.90  E-value=0.0058  Score=50.80  Aligned_cols=80  Identities=16%  Similarity=0.306  Sum_probs=57.9

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -.|.+++|++|+|..|.-+.+--.-+|++|+...-..++..-+.+++.-.         ...|-..+ ++.+   .+.+.
T Consensus       149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD---------~~idyk~~-d~~~---~L~~a  215 (340)
T COG2130         149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD---------AGIDYKAE-DFAQ---ALKEA  215 (340)
T ss_pred             CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc---------eeeecCcc-cHHH---HHHHH
Confidence            46899999999999999888877788999999988888776666655211         12354444 3333   33444


Q ss_pred             cC-CccEEEeCCCC
Q 044485           90 YG-KLDIMFNNAGT  102 (257)
Q Consensus        90 ~~-~id~lv~~ag~  102 (257)
                      .+ +||+.+-|.|.
T Consensus       216 ~P~GIDvyfeNVGg  229 (340)
T COG2130         216 CPKGIDVYFENVGG  229 (340)
T ss_pred             CCCCeEEEEEcCCc
Confidence            43 79999999995

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.89  E-value=0.004  Score=55.81  Aligned_cols=58  Identities=14%  Similarity=0.158  Sum_probs=43.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHH
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIE   80 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~   80 (257)
                      +++|.|+ |.+|+++++.|.++|..|++++++++..++..+..        .+.++.+|.++++.++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~--------~~~~~~gd~~~~~~l~   59 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL--------DVRTVVGNGSSPDVLR   59 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc--------CEEEEEeCCCCHHHHH
Confidence            6888887 99999999999999999999999988766554322        1445556666554443

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.89  E-value=0.0042  Score=50.43  Aligned_cols=37  Identities=19%  Similarity=0.398  Sum_probs=31.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKD   46 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   46 (257)
                      .+.+.+++|.|. ||+|..+++.|++.|.. +++++.+.
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            577889999987 89999999999999974 88887653

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.89  E-value=0.0054  Score=52.25  Aligned_cols=74  Identities=24%  Similarity=0.471  Sum_probs=53.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++.+++.+++..        ..+     +.+++.+.+.   
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~--------~~~-----~~~~~~~~l~---  237 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG--------NAV-----PLDELLELLN---  237 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC--------eEE-----eHHHHHHHHh---
Confidence            468999999998 9999999999999774 599999998887777776531        111     2223333222   


Q ss_pred             HHcCCccEEEeCCCCC
Q 044485           88 TQYGKLDIMFNNAGTV  103 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~  103 (257)
                          ..|++|.+.+..
T Consensus       238 ----~aDvVi~at~~~  249 (311)
T cd05213         238 ----EADVVISATGAP  249 (311)
T ss_pred             ----cCCEEEECCCCC
Confidence                479999998854

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.88  E-value=0.0028  Score=48.86  Aligned_cols=45  Identities=22%  Similarity=0.248  Sum_probs=38.5

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      .++.+|+++|.|++.-.|..+++.|.++|++|+++.|+.+.+.+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~~   84 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKEH   84 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHHH
Confidence            478999999999966689999999999999999999986554443

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.88  E-value=0.0049  Score=52.10  Aligned_cols=81  Identities=19%  Similarity=0.338  Sum_probs=53.1

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..+++++|+|+++++|.++++.+...|++|++++++.+..+.+ .+..      . -.++  |.... +..+.+.+....
T Consensus       143 ~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g------~-~~~~--~~~~~-~~~~~~~~~~~~  211 (328)
T cd08268         143 RPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALG------A-AHVI--VTDEE-DLVAEVLRITGG  211 (328)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcC------C-CEEE--ecCCc-cHHHHHHHHhCC
Confidence            3578999999999999999999999999999998887665544 2221      0 1122  22222 222222222211


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                       .++|.++++++.
T Consensus       212 -~~~d~vi~~~~~  223 (328)
T cd08268         212 -KGVDVVFDPVGG  223 (328)
T ss_pred             -CCceEEEECCch
Confidence             259999999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN00203 glutamyl-tRNA reductase

Probab=96.87  E-value=0.0061  Score=55.35  Aligned_cols=47  Identities=11%  Similarity=0.283  Sum_probs=41.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHh
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDI   56 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~   56 (257)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|+++.|+.+..+.+.+++
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            378999999999 9999999999999997 5999999998887777665

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.87  E-value=0.0056  Score=43.86  Aligned_cols=71  Identities=21%  Similarity=0.193  Sum_probs=53.6

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCcc
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLD   94 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~id   94 (257)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..++..++-         +.++.+|.++++.++++=-      ...+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~---------~~~i~gd~~~~~~l~~a~i------~~a~   64 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEG---------VEVIYGDATDPEVLERAGI------EKAD   64 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT---------SEEEES-TTSHHHHHHTTG------GCES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc---------cccccccchhhhHHhhcCc------cccC
Confidence            577777 68999999999998889999999988766665432         6789999999988776511      2577


Q ss_pred             EEEeCCC
Q 044485           95 IMFNNAG  101 (257)
Q Consensus        95 ~lv~~ag  101 (257)
                      .+|....
T Consensus        65 ~vv~~~~   71 (116)
T PF02254_consen   65 AVVILTD   71 (116)
T ss_dssp             EEEEESS
T ss_pred             EEEEccC
Confidence            7777665

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.86  E-value=0.0059  Score=52.61  Aligned_cols=77  Identities=22%  Similarity=0.387  Sum_probs=52.0

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ..+++++|+|+ |++|...++.+...|+ .|+++++++++++.+ +++..        . ...|..+. ++.+    +.+
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~lGa--------~-~vi~~~~~-~~~~----~~~  231 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REMGA--------D-KLVNPQND-DLDH----YKA  231 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHcCC--------c-EEecCCcc-cHHH----Hhc
Confidence            35889999986 8999999998888998 588898888776544 33421        1 11343332 2322    222


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                      ..+.+|++|.++|.
T Consensus       232 ~~g~~D~vid~~G~  245 (343)
T PRK09880        232 EKGYFDVSFEVSGH  245 (343)
T ss_pred             cCCCCCEEEECCCC
Confidence            23569999999984

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.84  E-value=0.0043  Score=51.95  Aligned_cols=40  Identities=25%  Similarity=0.339  Sum_probs=35.5

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      .+++||.++|.|+++-.|++++..|.++|++|+++.|...
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~  194 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ  194 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch
Confidence            4789999999999888999999999999999998877443

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.84  E-value=0.0062  Score=48.85  Aligned_cols=36  Identities=22%  Similarity=0.412  Sum_probs=32.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIK   45 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~   45 (257)
                      .+.+++++|.|+ ||+|..+++.|++.|.. +++++.+
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            577889999996 99999999999999986 8888876

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.84  E-value=0.0018  Score=45.69  Aligned_cols=92  Identities=23%  Similarity=0.289  Sum_probs=51.5

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccC-CCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSS-SSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      +.+++||.+||.|+ |.+|..=++.|.+.|++|++++...+..++..+..++. ...-.....+.+-..|++.-+++.+.
T Consensus         2 ~l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~~~~~~~i~~~~~~~~~~l~~~~lV~~at~d~~~n~~i~~~   80 (103)
T PF13241_consen    2 FLDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEIEFSEGLIQLIRREFEEDLDGADLVFAATDDPELNEAIYAD   80 (103)
T ss_dssp             EE--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSEHHHHTSCEEEESS-GGGCTTESEEEE-SS-HHHHHHHHHH
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCchhhhhhHHHHHhhhHHHHHhhheEEEecCCCHHHHHHHHHH
Confidence            45899999999999 99999999999999999999988852111111111110 00011244444544455444444444


Q ss_pred             HHHHcCCccEEEeCCCCC
Q 044485           86 AVTQYGKLDIMFNNAGTV  103 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~  103 (257)
                      . +.   -.+++|.+-.+
T Consensus        81 a-~~---~~i~vn~~D~p   94 (103)
T PF13241_consen   81 A-RA---RGILVNVVDDP   94 (103)
T ss_dssp             H-HH---TTSEEEETT-C
T ss_pred             H-hh---CCEEEEECCCc
Confidence            3 33   34677776643

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.78  E-value=0.0067  Score=48.20  Aligned_cols=37  Identities=24%  Similarity=0.462  Sum_probs=33.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCc
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIK   45 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~   45 (257)
                      ..+..++++|.|+ ||+|..++..|++.|. ++++++++
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4578899999998 8999999999999998 59999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.76  E-value=0.014  Score=51.18  Aligned_cols=48  Identities=29%  Similarity=0.503  Sum_probs=42.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIG   57 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~   57 (257)
                      ++.++++||.|+ |-+|.-+|++|+++|. .|+++.|+.++.+++++++.
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            589999999998 7899999999999995 59999999999888888774

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.75  E-value=0.0098  Score=51.61  Aligned_cols=83  Identities=13%  Similarity=0.173  Sum_probs=53.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc-------------------hhhHhHHHHhccCCCCCCCcee
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKD-------------------DLGESVCKDIGSSSSSASGCSY   68 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~v~~   68 (257)
                      .+.+++|+|.|+ ||+|..+++.|+..|.. +++++.+.                   .+.+.+.+.+.+..+ ..++..
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np-~v~v~~  102 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNP-DVKVTV  102 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCC-CcEEEE
Confidence            578899999998 89999999999999975 88887653                   234444555554433 234555


Q ss_pred             EecCCCCHHHHHHHHHHHHHHcCCccEEEeCCC
Q 044485           69 VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        69 ~~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag  101 (257)
                      +...++. +....+++       ..|+||.+..
T Consensus       103 ~~~~i~~-~~~~~~~~-------~~DvVvd~~d  127 (355)
T PRK05597        103 SVRRLTW-SNALDELR-------DADVILDGSD  127 (355)
T ss_pred             EEeecCH-HHHHHHHh-------CCCEEEECCC
Confidence            5555543 23222222       4666666653

>PRK08223 hypothetical protein; Validated

Probab=96.74  E-value=0.0063  Score=50.80  Aligned_cols=37  Identities=27%  Similarity=0.361  Sum_probs=32.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKD   46 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   46 (257)
                      .+.+.+|+|.|+ ||+|..++..|++.|.. +.+++.+.
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            578899999988 89999999999999976 88887654

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.73  E-value=0.016  Score=42.26  Aligned_cols=76  Identities=18%  Similarity=0.232  Sum_probs=54.2

Q ss_pred             EEEEecCCCchHHHHHHHHHH-cCCeE-EEeeCcc----------------------hhhHhHHHHhccCCCCCCCceeE
Q 044485           14 VALITGGARGIGECTARLFSK-HGAKV-LIADIKD----------------------DLGESVCKDIGSSSSSASGCSYV   69 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~-~g~~V-i~~~r~~----------------------~~~~~~~~~~~~~~~~~~~v~~~   69 (257)
                      ++.|.|++|-+|+.+++.+.+ .+..+ -.++|+.                      ..++++.++.        +   +
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~--------D---V   70 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEA--------D---V   70 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH---------S---E
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccC--------C---E
Confidence            689999999999999999999 67884 4556665                      1222222221        1   4


Q ss_pred             ecCCCCHHHHHHHHHHHHHHcCCccEEEeCCCC
Q 044485           70 HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGT  102 (257)
Q Consensus        70 ~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag~  102 (257)
                      ..|+|.++.+...++...+.  ++.+|+-..|.
T Consensus        71 vIDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   71 VIDFTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             EEEES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             EEEcCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            57999999999999888777  68888888885

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.72  E-value=0.028  Score=50.88  Aligned_cols=86  Identities=20%  Similarity=0.245  Sum_probs=61.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCC-------------C
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT-------------K   75 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-------------~   75 (257)
                      ...+.+++|.|+ |.+|...++.+...|+.|++++++.+.++...+ +.        ..++..|..             +
T Consensus       161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lG--------a~~v~v~~~e~g~~~~gYa~~~s  230 (511)
T TIGR00561       161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MG--------AEFLELDFKEEGGSGDGYAKVMS  230 (511)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC--------CeEEeccccccccccccceeecC
Confidence            345679999996 999999999999999999999998876554432 31        334444432             2


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCCCCC
Q 044485           76 EKDIENAVNTAVTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        76 ~~~v~~~~~~~~~~~~~id~lv~~ag~~~  104 (257)
                      .+..+...+.+.+.....|++|+++-+..
T Consensus       231 ~~~~~~~~~~~~e~~~~~DIVI~TalipG  259 (511)
T TIGR00561       231 EEFIAAEMELFAAQAKEVDIIITTALIPG  259 (511)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECcccCC
Confidence            34455555556666678999999995543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.69  E-value=0.0098  Score=44.02  Aligned_cols=80  Identities=19%  Similarity=0.325  Sum_probs=51.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc-------------------hhhHhHHHHhccCCCCCCCceeEec
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAK-VLIADIKD-------------------DLGESVCKDIGSSSSSASGCSYVHC   71 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~   71 (257)
                      +++++|.|+ |++|..+++.|++.|.. +++++.+.                   .+.+.+.+.+.+..+ ..++..+..
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np-~~~v~~~~~   79 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP-DVEVEAIPE   79 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST-TSEEEEEES
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcC-ceeeeeeec
Confidence            478999987 89999999999999985 88887532                   122233334433322 234666666


Q ss_pred             CCCCHHHHHHHHHHHHHHcCCccEEEeCCC
Q 044485           72 DVTKEKDIENAVNTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        72 D~~~~~~v~~~~~~~~~~~~~id~lv~~ag  101 (257)
                      ++ +.+...++++       ..|++|.+..
T Consensus        80 ~~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   80 KI-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             HC-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             cc-cccccccccc-------CCCEEEEecC
Confidence            66 3444554442       5788887765

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.66  E-value=0.0087  Score=50.73  Aligned_cols=80  Identities=25%  Similarity=0.337  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+.+++|+|+++++|.++++.+...|++|+.++++.+..+.+ +++.        +. ...|..+.+..+.+. +... .
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g--------~~-~~~~~~~~~~~~~~~-~~~~-~  209 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALG--------AD-VAVDYTRPDWPDQVR-EALG-G  209 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcC--------CC-EEEecCCccHHHHHH-HHcC-C
Confidence            478999999999999999999999999999998887765544 3332        11 112333333333322 2111 1


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                      .++|+++++.|.
T Consensus       210 ~~~d~vl~~~g~  221 (324)
T cd08244         210 GGVTVVLDGVGG  221 (324)
T ss_pred             CCceEEEECCCh
Confidence            259999999873

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd00704 MDH Malate dehydrogenase

Probab=96.63  E-value=0.0067  Score=51.86  Aligned_cols=74  Identities=16%  Similarity=0.094  Sum_probs=47.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-------eEEEeeCcc--hhhHhHHHHhccCCCCCCCceeEecCCCCHHH--HH--
Q 044485           14 VALITGGARGIGECTARLFSKHGA-------KVLIADIKD--DLGESVCKDIGSSSSSASGCSYVHCDVTKEKD--IE--   80 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--v~--   80 (257)
                      ++.||||+|.+|..++..|+..|.       .+++.++++  +.+                 .....|+.|...  ..  
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~-----------------~g~~~Dl~d~~~~~~~~~   64 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL-----------------EGVVMELQDCAFPLLKGV   64 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc-----------------ceeeeehhhhcccccCCc
Confidence            689999999999999999998662       499999876  322                 222334433310  00  


Q ss_pred             HHHHHHHHHcCCccEEEeCCCCCC
Q 044485           81 NAVNTAVTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        81 ~~~~~~~~~~~~id~lv~~ag~~~  104 (257)
                      .+-....+.+...|++|+.||...
T Consensus        65 ~i~~~~~~~~~~aDiVVitAG~~~   88 (323)
T cd00704          65 VITTDPEEAFKDVDVAILVGAFPR   88 (323)
T ss_pred             EEecChHHHhCCCCEEEEeCCCCC
Confidence            000112233347999999999754

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.62  E-value=0.014  Score=50.96  Aligned_cols=36  Identities=22%  Similarity=0.410  Sum_probs=31.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIK   45 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~   45 (257)
                      .+.+.+|+|.|+ ||+|..+++.|+..|. ++++++.+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            577889999988 8999999999999997 58888765

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.62  E-value=0.013  Score=50.94  Aligned_cols=80  Identities=21%  Similarity=0.281  Sum_probs=54.9

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCH-HHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKE-KDIENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~   87 (257)
                      ..+.++||.|+ +++|...++.+...|+ .|+.+++++++++.+ +++.        +. ...|..+. +++.+.+.++.
T Consensus       185 ~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lG--------a~-~~i~~~~~~~~~~~~v~~~~  253 (368)
T cd08300         185 EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFG--------AT-DCVNPKDHDKPIQQVLVEMT  253 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcC--------CC-EEEcccccchHHHHHHHHHh
Confidence            35789999975 8999999999999999 699999988876644 3332        11 11344333 23444444443


Q ss_pred             HHcCCccEEEeCCCC
Q 044485           88 TQYGKLDIMFNNAGT  102 (257)
Q Consensus        88 ~~~~~id~lv~~ag~  102 (257)
                      .  +++|+++.+.|.
T Consensus       254 ~--~g~d~vid~~g~  266 (368)
T cd08300         254 D--GGVDYTFECIGN  266 (368)
T ss_pred             C--CCCcEEEECCCC
Confidence            3  369999999884

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.59  E-value=0.011  Score=57.80  Aligned_cols=77  Identities=16%  Similarity=0.229  Sum_probs=61.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcC-Ce-------------EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHG-AK-------------VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKE   76 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g-~~-------------Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~   76 (257)
                      ..|.|+|.|+ |.+|+.+++.|++.. +.             |++++++.+..+++.+...       .+..++.|++|.
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~-------~~~~v~lDv~D~  639 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE-------NAEAVQLDVSDS  639 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC-------CCceEEeecCCH
Confidence            4578999997 999999999998763 33             8888888877777666542       266789999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCCC
Q 044485           77 KDIENAVNTAVTQYGKLDIMFNNAGT  102 (257)
Q Consensus        77 ~~v~~~~~~~~~~~~~id~lv~~ag~  102 (257)
                      +++.++++       .+|+||++...
T Consensus       640 e~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        640 ESLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHHHHhhc-------CCCEEEECCCc
Confidence            88877765       59999999874

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.59  E-value=0.0071  Score=45.08  Aligned_cols=45  Identities=31%  Similarity=0.342  Sum_probs=39.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      .+++||.++|.|.+.-.|+.++..|.++|++|.++.++...+++.
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~   68 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSK   68 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHH
Confidence            478999999999999999999999999999999998766554443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.59  E-value=0.01  Score=50.87  Aligned_cols=79  Identities=16%  Similarity=0.211  Sum_probs=52.7

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ..+.++||+|+ |++|..+++.+...|++ |+++++++++.+.+ +++..        . ...|..+.+ .+++. ++..
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga--------~-~~i~~~~~~-~~~~~-~~~~  228 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGA--------D-FVINSGQDD-VQEIR-ELTS  228 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCC--------C-EEEcCCcch-HHHHH-HHhC
Confidence            45889999986 89999999999999999 99998887766544 34421        1 123444433 33322 2211


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                       ..++|++|.+.|.
T Consensus       229 -~~~~d~vid~~g~  241 (339)
T cd08239         229 -GAGADVAIECSGN  241 (339)
T ss_pred             -CCCCCEEEECCCC
Confidence             1269999999884

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.56  E-value=0.014  Score=45.34  Aligned_cols=32  Identities=25%  Similarity=0.418  Sum_probs=28.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc
Q 044485           14 VALITGGARGIGECTARLFSKHGAK-VLIADIKD   46 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   46 (257)
                      +++|.|+ ||+|..+++.|++.|.. +++++.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3788886 99999999999999986 99998875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.56  E-value=0.015  Score=50.69  Aligned_cols=79  Identities=22%  Similarity=0.314  Sum_probs=53.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC-HHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK-EKDIENAVNTAVT   88 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~   88 (257)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++++.+ +++..        . ...|..+ .+.+.+.+.++..
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~Ga--------~-~~i~~~~~~~~~~~~v~~~~~  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLGA--------T-DCVNPNDYDKPIQEVIVEITD  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCC--------C-eEEcccccchhHHHHHHHHhC
Confidence            5789999985 9999999999888999 699998888776555 33321        1 1223332 2233333333332


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                        +++|++|.++|.
T Consensus       254 --~g~d~vid~~G~  265 (368)
T TIGR02818       254 --GGVDYSFECIGN  265 (368)
T ss_pred             --CCCCEEEECCCC
Confidence              369999999984

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.55  E-value=0.014  Score=47.71  Aligned_cols=37  Identities=22%  Similarity=0.409  Sum_probs=32.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKD   46 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   46 (257)
                      .+.+.+|+|.|+ ||+|..+++.|++.|.. +++++.+.
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            577889999987 89999999999999975 88887654

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.46  E-value=0.024  Score=48.97  Aligned_cols=42  Identities=24%  Similarity=0.408  Sum_probs=36.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      ..+.+++|.|+ |++|...++.+...|++|+++++++++++.+
T Consensus       165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            35789999999 9999999999999999999999988776554

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.45  E-value=0.016  Score=51.67  Aligned_cols=41  Identities=29%  Similarity=0.529  Sum_probs=35.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHH
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK   54 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   54 (257)
                      ++.|.||+|.+|.++++.|.+.|++|++.+|+++..++..+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~   42 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK   42 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence            68999999999999999999999999999998776544433

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.41  E-value=0.011  Score=43.32  Aligned_cols=90  Identities=17%  Similarity=0.224  Sum_probs=54.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEe-eCcchhhHhHHHHhccCC-----CCCCCceeEecCCCCHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSSS-----SSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~-----~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ..++-|.|+ |-+|.++++.|.+.|+.|..+ +|+.+..++..+.+....     ....+...+-+-+.|. .+..++++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~   87 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQ   87 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHH
Confidence            457889998 899999999999999997666 577666666665543210     0012234444545554 78888888


Q ss_pred             HHHH--cCCccEEEeCCCCC
Q 044485           86 AVTQ--YGKLDIMFNNAGTV  103 (257)
Q Consensus        86 ~~~~--~~~id~lv~~ag~~  103 (257)
                      +.+.  ..+=.+++||.|-.
T Consensus        88 La~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS-
T ss_pred             HHHhccCCCCcEEEECCCCC
Confidence            8754  22335899999965

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.39  E-value=0.025  Score=48.04  Aligned_cols=77  Identities=18%  Similarity=0.288  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+++++|.|+++++|.++++...+.|++|+++.+++++.+.. +++.        +. ...|..+. . .+.+.+..  .
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--------~~-~v~~~~~~-~-~~~~~~~~--~  211 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLG--------AK-EVIPREEL-Q-EESIKPLE--K  211 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcC--------CC-EEEcchhH-H-HHHHHhhc--c
Confidence            367999999999999999999999999999998888765555 3332        11 11222222 1 22222221  2


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                      +++|+++++.|
T Consensus       212 ~~~d~vld~~g  222 (326)
T cd08289         212 QRWAGAVDPVG  222 (326)
T ss_pred             CCcCEEEECCc
Confidence            46999999887

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.39  E-value=0.024  Score=47.79  Aligned_cols=77  Identities=25%  Similarity=0.376  Sum_probs=51.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..+.+++|.|+++++|.++++.....|++|+.+.++.++.+.+ .++.        +..+..+  .. +....+.+.   
T Consensus       141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--------~~~~~~~--~~-~~~~~i~~~---  205 (320)
T cd08243         141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELG--------ADEVVID--DG-AIAEQLRAA---  205 (320)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcC--------CcEEEec--Cc-cHHHHHHHh---
Confidence            3578999999999999999999999999999998887655444 3332        1111111  11 222222222   


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                      -+++|.++++.|
T Consensus       206 ~~~~d~vl~~~~  217 (320)
T cd08243         206 PGGFDKVLELVG  217 (320)
T ss_pred             CCCceEEEECCC
Confidence            236999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=96.39  E-value=0.022  Score=50.45  Aligned_cols=89  Identities=13%  Similarity=0.132  Sum_probs=53.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC---eEEEeeCcchhhHhHHHHhccCC-CCCCCceeEecCCCCHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA---KVLIADIKDDLGESVCKDIGSSS-SSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~---~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .|.+++|.|++|++|...++.+...|+   +|+++++++++++.+.+...... ..+  +.....|..+.++..+.+.++
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~G--a~~~~i~~~~~~~~~~~v~~~  252 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRG--IELLYVNPATIDDLHATLMEL  252 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccC--ceEEEECCCccccHHHHHHHH
Confidence            467999999999999999888777654   69999999887766544321100 000  111223433322333333333


Q ss_pred             HHHcCCccEEEeCCCC
Q 044485           87 VTQYGKLDIMFNNAGT  102 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~  102 (257)
                      ... .++|.+|.+.|.
T Consensus       253 t~g-~g~D~vid~~g~  267 (410)
T cd08238         253 TGG-QGFDDVFVFVPV  267 (410)
T ss_pred             hCC-CCCCEEEEcCCC
Confidence            221 259999998873

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.36  E-value=0.025  Score=49.15  Aligned_cols=75  Identities=16%  Similarity=0.310  Sum_probs=49.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+++++|.|+ |++|..+++.+...|++|++++.+.++..+..+++.        +. ...|..+.+.+.+       ..
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~G--------a~-~vi~~~~~~~~~~-------~~  245 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLG--------AD-SFLVSTDPEKMKA-------AI  245 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCC--------Cc-EEEcCCCHHHHHh-------hc
Confidence            5789999775 999999999999999998888777665544444442        11 1123333322222       22


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                      +++|++|.+.|.
T Consensus       246 ~~~D~vid~~g~  257 (360)
T PLN02586        246 GTMDYIIDTVSA  257 (360)
T ss_pred             CCCCEEEECCCC
Confidence            469999999883

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=96.36  E-value=0.021  Score=48.31  Aligned_cols=81  Identities=17%  Similarity=0.216  Sum_probs=53.0

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..+.+++|.|+++++|.++++.+...|+.|+++.++.++.+.+ +++.        +. ...|..+.+..++ +.+....
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--------~~-~~~~~~~~~~~~~-~~~~~~~  205 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALG--------AD-EVIDSSPEDLAQR-VKEATGG  205 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcC--------CC-EEecccchhHHHH-HHHHhcC
Confidence            3578999999999999999999999999999888887665444 3331        11 1122222222222 2222211


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                       .++|.++.+.|.
T Consensus       206 -~~~d~vl~~~g~  217 (323)
T cd05282         206 -AGARLALDAVGG  217 (323)
T ss_pred             -CCceEEEECCCC
Confidence             269999999873

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.36  E-value=0.019  Score=48.70  Aligned_cols=80  Identities=15%  Similarity=0.226  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+.++||.|+++++|.++++.....|+.++.+.++.+..+.+.+ .. .      -.++  +..+. +....+.+.... 
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g-~------~~~~--~~~~~-~~~~~i~~~~~~-  206 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-LG-I------GPVV--STEQP-GWQDKVREAAGG-  206 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-cC-C------CEEE--cCCCc-hHHHHHHHHhCC-
Confidence            57899999999999999999999999999998887766555533 21 0      1112  22222 222223322211 


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                      .++|+++.+.|.
T Consensus       207 ~~~d~v~d~~g~  218 (324)
T cd08292         207 APISVALDSVGG  218 (324)
T ss_pred             CCCcEEEECCCC
Confidence            259999999884

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.34  E-value=0.0094  Score=45.45  Aligned_cols=46  Identities=26%  Similarity=0.336  Sum_probs=35.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVC   53 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~   53 (257)
                      .+++||+++|.|.|.-+|+.++..|.++|++|.++....+.+++..
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~   77 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEIT   77 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccccee
Confidence            4789999999999999999999999999999998877665554443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PLN02740 Alcohol dehydrogenase-like

Probab=96.33  E-value=0.022  Score=49.89  Aligned_cols=80  Identities=24%  Similarity=0.334  Sum_probs=53.5

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCH-HHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKE-KDIENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~   87 (257)
                      ..|.++||.|+ |++|...++.+...|+ .|+++++++++++.+ +++..       -.+  .|..+. +...+.+.++.
T Consensus       197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~Ga-------~~~--i~~~~~~~~~~~~v~~~~  265 (381)
T PLN02740        197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEMGI-------TDF--INPKDSDKPVHERIREMT  265 (381)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHcCC-------cEE--EecccccchHHHHHHHHh
Confidence            35789999986 9999999999999999 599999888776555 33321       112  243332 12333333333


Q ss_pred             HHcCCccEEEeCCCC
Q 044485           88 TQYGKLDIMFNNAGT  102 (257)
Q Consensus        88 ~~~~~id~lv~~ag~  102 (257)
                      .  +++|++|.++|.
T Consensus       266 ~--~g~dvvid~~G~  278 (381)
T PLN02740        266 G--GGVDYSFECAGN  278 (381)
T ss_pred             C--CCCCEEEECCCC
Confidence            2  269999999984

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.32  E-value=0.04  Score=47.02  Aligned_cols=81  Identities=17%  Similarity=0.259  Sum_probs=55.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +-.++++.|+|+ |.+|.+++..|+..|.  .+++.+++++.++-...++........++... .  .+.+       . 
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~-------~-   70 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYS-------D-   70 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHH-------H-
Confidence            445689999998 9999999999999986  59999998877665555554332110112222 1  1221       1 


Q ss_pred             HHHcCCccEEEeCCCCCC
Q 044485           87 VTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~  104 (257)
                         +..-|++|..||...
T Consensus        71 ---~~~adivIitag~~~   85 (315)
T PRK00066         71 ---CKDADLVVITAGAPQ   85 (315)
T ss_pred             ---hCCCCEEEEecCCCC
Confidence               236999999999753

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.30  E-value=0.012  Score=49.26  Aligned_cols=44  Identities=25%  Similarity=0.327  Sum_probs=38.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHh
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGES   51 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~   51 (257)
                      .+++||.++|+|.|.-+|+.+++.|.++|++|+++.++...+++
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~  197 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMAS  197 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence            37899999999999999999999999999999888876554433

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.28  E-value=0.059  Score=45.77  Aligned_cols=77  Identities=19%  Similarity=0.294  Sum_probs=51.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcC--CeEEEeeCcchhhHhHHHHhccCCC-CCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHG--AKVLIADIKDDLGESVCKDIGSSSS-SASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +++.|.|+ |++|.+++..|+..|  ..|++++++.+..+....++..... ....+... .  .+.+.           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-----------
Confidence            36888996 999999999999999  4799999998877766666543211 00111111 1  22221           


Q ss_pred             cCCccEEEeCCCCCC
Q 044485           90 YGKLDIMFNNAGTVD  104 (257)
Q Consensus        90 ~~~id~lv~~ag~~~  104 (257)
                      ....|++|+++|...
T Consensus        66 l~~aDIVIitag~~~   80 (306)
T cd05291          66 CKDADIVVITAGAPQ   80 (306)
T ss_pred             hCCCCEEEEccCCCC
Confidence            136999999999753

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=96.28  E-value=0.033  Score=48.73  Aligned_cols=75  Identities=15%  Similarity=0.307  Sum_probs=49.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+.+++|.|+ |++|...++.....|++|++++++.+...+..+++.        +. ...|..+.+.+.       +..
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lG--------a~-~~i~~~~~~~v~-------~~~  240 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLG--------AD-SFLVTTDSQKMK-------EAV  240 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCC--------Cc-EEEcCcCHHHHH-------Hhh
Confidence            5789999986 899999999999999999988877654334434332        11 112333322222       222


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                      +++|+++.+.|.
T Consensus       241 ~~~D~vid~~G~  252 (375)
T PLN02178        241 GTMDFIIDTVSA  252 (375)
T ss_pred             CCCcEEEECCCc
Confidence            469999999874

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=96.26  E-value=0.031  Score=47.49  Aligned_cols=42  Identities=31%  Similarity=0.509  Sum_probs=36.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      .+.+++|.|+++++|.++++.+...|+.++++.++.++.+.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999988888887665555

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.26  E-value=0.012  Score=47.52  Aligned_cols=41  Identities=22%  Similarity=0.300  Sum_probs=36.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHH
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK   54 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   54 (257)
                      ++.|.||+|.+|.++++.|++.|++|++.+|+++..++..+
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~   42 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA   42 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence            58999999999999999999999999999999877766554

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.25  E-value=0.035  Score=46.71  Aligned_cols=65  Identities=20%  Similarity=0.275  Sum_probs=50.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCC-CHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT-KEKDIENAVNT   85 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~v~~~~~~   85 (257)
                      .|+++-|+|+.| ||.--++.-.+.|++|++.++...+.++..+.+.+        ..+ +|.+ |++.++++.+.
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGA--------d~f-v~~~~d~d~~~~~~~~  246 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGA--------DVF-VDSTEDPDIMKAIMKT  246 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCc--------cee-EEecCCHHHHHHHHHh
Confidence            789999999977 99988888888899999999998777777776642        112 4666 78877776653

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=96.20  E-value=0.025  Score=47.40  Aligned_cols=43  Identities=21%  Similarity=0.265  Sum_probs=37.1

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      ..+++++|.|+++++|.++++.+...|+.|+.+.++.++.+.+
T Consensus       135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            3578999999999999999999999999999998877665444

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.18  E-value=0.023  Score=48.40  Aligned_cols=79  Identities=22%  Similarity=0.408  Sum_probs=52.4

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..+.+++|.|+++++|.++++.....|+.|+.+.++.+..+.+ +++..     .  .++  |..+. +....+.+... 
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~-----~--~v~--~~~~~-~~~~~~~~~~~-  205 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGC-----D--RPI--NYKTE-DLGEVLKKEYP-  205 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCC-----c--eEE--eCCCc-cHHHHHHHhcC-
Confidence            4578999999999999999999999999999998887665444 33321     0  112  22222 23233333221 


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                       +++|.++++.|
T Consensus       206 -~~vd~v~~~~g  216 (329)
T cd08250         206 -KGVDVVYESVG  216 (329)
T ss_pred             -CCCeEEEECCc
Confidence             36999999877

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.17  E-value=0.038  Score=49.98  Aligned_cols=77  Identities=17%  Similarity=0.130  Sum_probs=52.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch-hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD-LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++.+++++|.|+ |++|.++|+.|+++|+.|++++++.. ......+.+...+     +.++..+-..            
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~g-----v~~~~~~~~~------------   74 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALG-----ATVRLGPGPT------------   74 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcC-----CEEEECCCcc------------
Confidence            577899999997 88999999999999999999986543 3333334444332     4444332211            


Q ss_pred             HHcCCccEEEeCCCCCC
Q 044485           88 TQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~  104 (257)
                       .....|.+|...|+..
T Consensus        75 -~~~~~D~Vv~s~Gi~~   90 (480)
T PRK01438         75 -LPEDTDLVVTSPGWRP   90 (480)
T ss_pred             -ccCCCCEEEECCCcCC
Confidence             0125899999999754

>PRK05086 malate dehydrogenase; Provisional

Probab=96.16  E-value=0.0064  Score=51.77  Aligned_cols=34  Identities=26%  Similarity=0.367  Sum_probs=27.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHH-cC--CeEEEeeCcc
Q 044485           13 KVALITGGARGIGECTARLFSK-HG--AKVLIADIKD   46 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~-~g--~~Vi~~~r~~   46 (257)
                      ++++|.||+|++|.+++..+.. .+  ..+++.+|++
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~   37 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAP   37 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCC
Confidence            4799999999999999999865 33  4588888774

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.15  E-value=0.026  Score=49.94  Aligned_cols=40  Identities=23%  Similarity=0.436  Sum_probs=35.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhh
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG   49 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~   49 (257)
                      .+.|++++|.|. |.+|+.+++.+...|++|+++++++...
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra  248 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA  248 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence            468999999997 7999999999999999999999887654

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.12  E-value=0.031  Score=48.36  Aligned_cols=75  Identities=23%  Similarity=0.473  Sum_probs=49.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc---chhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIK---DDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~---~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ..+++++|+|+ |++|...++.+...|++|++++|+   +++++ ..+++.        +..  .|..+. .+.+ .   
T Consensus       171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~G--------a~~--v~~~~~-~~~~-~---  233 (355)
T cd08230         171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEELG--------ATY--VNSSKT-PVAE-V---  233 (355)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcC--------CEE--ecCCcc-chhh-h---
Confidence            36789999986 999999999888899999999984   33333 333332        222  233332 2222 1   


Q ss_pred             HHHcCCccEEEeCCCC
Q 044485           87 VTQYGKLDIMFNNAGT  102 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~  102 (257)
                       +..+.+|++|.++|.
T Consensus       234 -~~~~~~d~vid~~g~  248 (355)
T cd08230         234 -KLVGEFDLIIEATGV  248 (355)
T ss_pred             -hhcCCCCEEEECcCC
Confidence             112479999999983

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.12  E-value=0.027  Score=50.47  Aligned_cols=78  Identities=22%  Similarity=0.299  Sum_probs=59.6

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ...+.++|.|+ |.+|+.+++.|.+.|.+|++++++++..++..++..       .+.++.+|.++++.++++-      
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~-------~~~~i~gd~~~~~~L~~~~------  294 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELP-------NTLVLHGDGTDQELLEEEG------  294 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCC-------CCeEEECCCCCHHHHHhcC------
Confidence            45688999999 999999999999999999999999887766655431       2567889999887665431      


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                      ....|.+|.+..
T Consensus       295 ~~~a~~vi~~~~  306 (453)
T PRK09496        295 IDEADAFIALTN  306 (453)
T ss_pred             CccCCEEEECCC
Confidence            125777776554

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.11  E-value=0.039  Score=42.25  Aligned_cols=88  Identities=17%  Similarity=0.163  Sum_probs=56.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCC----CCCceeEecCCCCHHHHHHHHHH--H
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSS----ASGCSYVHCDVTKEKDIENAVNT--A   86 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~v~~~~~~--~   86 (257)
                      +++-+.|. |-+|..++++|++.|++|++.+|+++..+++.++-......    ..+..++..=+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            57888887 89999999999999999999999988877765432110000    01134455557788888888777  6


Q ss_pred             HHHcCCccEEEeCCC
Q 044485           87 VTQYGKLDIMFNNAG  101 (257)
Q Consensus        87 ~~~~~~id~lv~~ag  101 (257)
                      .....+=.++|++..
T Consensus        81 ~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   81 LAGLRPGKIIIDMST   95 (163)
T ss_dssp             GGGS-TTEEEEE-SS
T ss_pred             hhccccceEEEecCC
Confidence            554444455665554

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=96.11  E-value=0.043  Score=48.31  Aligned_cols=42  Identities=24%  Similarity=0.324  Sum_probs=35.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      .+.+++|.|+++++|.++++.+...|++++++.++.++.+.+
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~  230 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC  230 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            568999999999999999999999999988887776654433

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=96.09  E-value=0.05  Score=46.73  Aligned_cols=75  Identities=29%  Similarity=0.463  Sum_probs=49.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+.+++|+|+++++|.++++.....|++|+.+.++ +. .+..+++.        +. ...|..+.+..+.    +.. .
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~-~~~~~~~g--------~~-~~~~~~~~~~~~~----l~~-~  225 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DA-IPLVKSLG--------AD-DVIDYNNEDFEEE----LTE-R  225 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-ch-HHHHHHhC--------Cc-eEEECCChhHHHH----HHh-c
Confidence            38999999999999999999999999998887764 22 22333332        11 1123333333222    222 2


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                      +++|.++++.|
T Consensus       226 ~~vd~vi~~~g  236 (350)
T cd08248         226 GKFDVILDTVG  236 (350)
T ss_pred             CCCCEEEECCC
Confidence            46999999987

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=96.09  E-value=0.036  Score=47.46  Aligned_cols=79  Identities=23%  Similarity=0.351  Sum_probs=52.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+.++||.|+++++|.++++.+.+.|++|+.+.+++++.+.. +++.        +. ...+..+.+..+++. +... -
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--------~~-~v~~~~~~~~~~~~~-~~~~-~  232 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELG--------AD-AFVDFKKSDDVEAVK-ELTG-G  232 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcC--------Cc-EEEcCCCccHHHHHH-HHhc-C
Confidence            578999999999999999999999999999999887665444 3332        11 112333333233322 2211 1


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                      +++|.++++.+
T Consensus       233 ~~vd~vl~~~~  243 (341)
T cd08297         233 GGAHAVVVTAV  243 (341)
T ss_pred             CCCCEEEEcCC
Confidence            36999998665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.09  E-value=0.042  Score=41.01  Aligned_cols=31  Identities=23%  Similarity=0.400  Sum_probs=26.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCe-EEEeeCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAK-VLIADIK   45 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~   45 (257)
                      +++|.|+ ||+|..+++.|++.|.. +.+++.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            4788887 99999999999999984 8888755

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=96.09  E-value=0.03  Score=47.74  Aligned_cols=78  Identities=21%  Similarity=0.307  Sum_probs=48.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      ++++++|+++++|...++.....|++|+.+.+++++.+.+.+ +..       -+++  |..+.+..++ +.+.... .+
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~g~-------~~~i--~~~~~~~~~~-v~~~~~~-~~  212 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-IGA-------EYVL--NSSDPDFLED-LKELIAK-LN  212 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCC-------cEEE--ECCCccHHHH-HHHHhCC-CC
Confidence            444445999999999999888889999999888776555533 211       1122  3333222222 2222211 25


Q ss_pred             ccEEEeCCCC
Q 044485           93 LDIMFNNAGT  102 (257)
Q Consensus        93 id~lv~~ag~  102 (257)
                      +|+++++.|.
T Consensus       213 ~d~vid~~g~  222 (324)
T cd08291         213 ATIFFDAVGG  222 (324)
T ss_pred             CcEEEECCCc
Confidence            9999998873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=96.09  E-value=0.039  Score=48.48  Aligned_cols=43  Identities=23%  Similarity=0.322  Sum_probs=36.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      ..+.+++|+|+++++|.++++.+...|++++++.++.++.+.+
T Consensus       192 ~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         192 KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            3578999999999999999999999999988888877765544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK14851 hypothetical protein; Provisional

Probab=96.08  E-value=0.033  Score=52.37  Aligned_cols=83  Identities=14%  Similarity=0.194  Sum_probs=56.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc-------------------hhhHhHHHHhccCCCCCCCcee
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKD-------------------DLGESVCKDIGSSSSSASGCSY   68 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~v~~   68 (257)
                      .+.+.+|+|.|+ ||+|..++..|+..|.. +++++.+.                   .+.+.+.+.+.+..+ ..+|..
T Consensus        40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP-~~~I~~  117 (679)
T PRK14851         40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINP-FLEITP  117 (679)
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCC-CCeEEE
Confidence            578899999995 89999999999999975 77765422                   233334445544443 345777


Q ss_pred             EecCCCCHHHHHHHHHHHHHHcCCccEEEeCCC
Q 044485           69 VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        69 ~~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag  101 (257)
                      +...++ ++.+..+++       ++|+||.+.-
T Consensus       118 ~~~~i~-~~n~~~~l~-------~~DvVid~~D  142 (679)
T PRK14851        118 FPAGIN-ADNMDAFLD-------GVDVVLDGLD  142 (679)
T ss_pred             EecCCC-hHHHHHHHh-------CCCEEEECCC
Confidence            777775 445555544       5777776554

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.07  E-value=0.035  Score=48.37  Aligned_cols=78  Identities=22%  Similarity=0.377  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .++++||.|+ +++|...++.+...|+ .|+++++++++++.+ +++.        +. ...|..+.+..++ +.++.. 
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~G--------a~-~~i~~~~~~~~~~-i~~~~~-  257 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELG--------AT-ATVNAGDPNAVEQ-VRELTG-  257 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcC--------Cc-eEeCCCchhHHHH-HHHHhC-
Confidence            5789999985 8999999999889999 588888888776544 3332        11 1234333332222 222221 


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                       +++|++|.+.|.
T Consensus       258 -~g~d~vid~~G~  269 (371)
T cd08281         258 -GGVDYAFEMAGS  269 (371)
T ss_pred             -CCCCEEEECCCC
Confidence             369999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=96.07  E-value=0.029  Score=48.64  Aligned_cols=79  Identities=18%  Similarity=0.329  Sum_probs=51.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .++++||.|+ +++|...++.+...|+. |+.+++++++++.+ +++..        . ...|..+.+..+. +.+....
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~Ga--------~-~~i~~~~~~~~~~-i~~~~~~  243 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REFGA--------T-HTVNSSGTDPVEA-IRALTGG  243 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCC--------c-eEEcCCCcCHHHH-HHHHhCC
Confidence            5789999985 99999999999899996 88888887765554 33321        1 1123333332222 2222111


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                       .++|++|.+.|.
T Consensus       244 -~g~d~vid~~g~  255 (358)
T TIGR03451       244 -FGADVVIDAVGR  255 (358)
T ss_pred             -CCCCEEEECCCC
Confidence             259999999884

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.07  E-value=0.015  Score=45.31  Aligned_cols=43  Identities=26%  Similarity=0.326  Sum_probs=35.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIG   57 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~   57 (257)
                      +|.|.|+ |-+|+.||..++..|++|++.+++++.+++..+.+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence            4678888 999999999999999999999999988877766554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.07  E-value=0.031  Score=47.46  Aligned_cols=32  Identities=25%  Similarity=0.358  Sum_probs=27.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc
Q 044485           14 VALITGGARGIGECTARLFSKHGAK-VLIADIKD   46 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   46 (257)
                      +|+|.|+ ||+|..+++.|+..|.. +.+++.+.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~   33 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDT   33 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCC
Confidence            4788887 99999999999999976 88877543

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.04  E-value=0.016  Score=48.78  Aligned_cols=79  Identities=19%  Similarity=0.275  Sum_probs=56.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++.||.+.|.|.++-+|+.++..|.++|++|+++.|+...+++..++          ..++..=+.+++.++..+    
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~----------ADIVIsavg~~~~v~~~~----  220 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQ----------ADIVVAAVGRPRLIDADW----  220 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhc----------CCEEEEecCChhcccHhh----
Confidence            378999999999999999999999999999999997776655444332          233334445565555433    


Q ss_pred             HHcCCccEEEeCCCCC
Q 044485           88 TQYGKLDIMFNNAGTV  103 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~  103 (257)
                         -+...+|-..|+.
T Consensus       221 ---ik~GaiVIDvgin  233 (301)
T PRK14194        221 ---LKPGAVVIDVGIN  233 (301)
T ss_pred             ---ccCCcEEEEeccc
Confidence               1355666666654

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=96.04  E-value=0.029  Score=47.19  Aligned_cols=42  Identities=26%  Similarity=0.415  Sum_probs=36.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      .+++++|+|+++++|.++++.+...|+.|+.++++.+..+..
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999998887655444

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=96.04  E-value=0.031  Score=47.75  Aligned_cols=63  Identities=25%  Similarity=0.243  Sum_probs=45.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-cchhhH---------hHHHHhccCCCCCCCceeEecCCCCH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGE---------SVCKDIGSSSSSASGCSYVHCDVTKE   76 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~---------~~~~~~~~~~~~~~~v~~~~~D~~~~   76 (257)
                      ..+.||++-|.|. |.||+++++++...|++|+..++ .....+         .+-+.+.+     .++..+.+.++++
T Consensus       138 ~el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~-----sDiv~lh~PlT~e  210 (324)
T COG0111         138 TELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAE-----ADILTLHLPLTPE  210 (324)
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhh-----CCEEEEcCCCCcc
Confidence            3678999999987 89999999999999999999998 222111         11111221     3488888888765

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=96.03  E-value=0.043  Score=47.77  Aligned_cols=80  Identities=20%  Similarity=0.325  Sum_probs=53.4

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCH-HHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKE-KDIENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~   87 (257)
                      ..+.++||.|+ +++|...++.+...|+ +|+.++++.++.+.+ +++..       -.+  .|..+. +++.+.+.++.
T Consensus       186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga-------~~~--i~~~~~~~~~~~~v~~~~  254 (369)
T cd08301         186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGV-------TEF--VNPKDHDKPVQEVIAEMT  254 (369)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCC-------ceE--EcccccchhHHHHHHHHh
Confidence            35789999985 9999999999989999 799999888766544 33321       111  233321 23444444443


Q ss_pred             HHcCCccEEEeCCCC
Q 044485           88 TQYGKLDIMFNNAGT  102 (257)
Q Consensus        88 ~~~~~id~lv~~ag~  102 (257)
                      .  +++|+++.+.|.
T Consensus       255 ~--~~~d~vid~~G~  267 (369)
T cd08301         255 G--GGVDYSFECTGN  267 (369)
T ss_pred             C--CCCCEEEECCCC
Confidence            2  369999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.02  E-value=0.032  Score=44.23  Aligned_cols=36  Identities=28%  Similarity=0.402  Sum_probs=30.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIK   45 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~   45 (257)
                      .+.+++++|.|+ ||+|..+++.|+..|.. +.+++.+
T Consensus        18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            567889999986 66999999999999986 8888765

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.00  E-value=0.068  Score=42.37  Aligned_cols=73  Identities=15%  Similarity=0.239  Sum_probs=47.0

Q ss_pred             EEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccC--C------CCCCCceeEecCCCCHHHHHHHHHHH
Q 044485           16 LITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSS--S------SSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus        16 lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~--~------~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ...||+|.||.+++++|++.|++|++.+|+. +.++.+.+++...  .      -...+|.++.+.+   +.+..+++++
T Consensus         4 ~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~~~l   80 (211)
T COG2085           4 IAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVLAEL   80 (211)
T ss_pred             EEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHHHHH
Confidence            3445679999999999999999998886555 4555555544321  0      0013355555544   4566667777


Q ss_pred             HHHcC
Q 044485           87 VTQYG   91 (257)
Q Consensus        87 ~~~~~   91 (257)
                      .+.++
T Consensus        81 ~~~~~   85 (211)
T COG2085          81 RDALG   85 (211)
T ss_pred             HHHhC
Confidence            77665

>PRK07877 hypothetical protein; Provisional

Probab=95.99  E-value=0.032  Score=52.63  Aligned_cols=82  Identities=16%  Similarity=0.252  Sum_probs=56.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcc------------------hhhHhHHHHhccCCCCCCCcee
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA--KVLIADIKD------------------DLGESVCKDIGSSSSSASGCSY   68 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~------------------~~~~~~~~~~~~~~~~~~~v~~   68 (257)
                      .+.+++|+|.|+ | +|..++..|++.|.  ++++++.+.                  .+.+.+.+.+.+..+ ..+|..
T Consensus       104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp-~i~v~~  180 (722)
T PRK07877        104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDP-YLPVEV  180 (722)
T ss_pred             HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCC-CCEEEE
Confidence            578899999999 4 99999999999995  688887643                  233334444544433 345777


Q ss_pred             EecCCCCHHHHHHHHHHHHHHcCCccEEEeCCC
Q 044485           69 VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        69 ~~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag  101 (257)
                      +...++ ++.++++++       ..|+||.|.-
T Consensus       181 ~~~~i~-~~n~~~~l~-------~~DlVvD~~D  205 (722)
T PRK07877        181 FTDGLT-EDNVDAFLD-------GLDVVVEECD  205 (722)
T ss_pred             EeccCC-HHHHHHHhc-------CCCEEEECCC
Confidence            777776 566666554       4777777654

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.95  E-value=0.022  Score=44.36  Aligned_cols=44  Identities=32%  Similarity=0.320  Sum_probs=37.1

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGE   50 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~   50 (257)
                      ...++.|+++.|.|. |.||+++|+.+...|++|+..+|.....+
T Consensus        30 ~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   30 PGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            345789999999987 99999999999999999999999887543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PLN02494 adenosylhomocysteinase

Probab=95.95  E-value=0.038  Score=49.30  Aligned_cols=39  Identities=31%  Similarity=0.478  Sum_probs=35.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL   48 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   48 (257)
                      .+.||+++|.|. |.||+.+|+.+...|++|+++++++..
T Consensus       251 ~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        251 MIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            478999999998 699999999999999999999888754

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.93  E-value=0.033  Score=47.84  Aligned_cols=89  Identities=17%  Similarity=0.229  Sum_probs=54.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHH---HhccCCCCCCCceeEecCCCCHHHHHHHH-
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK---DIGSSSSSASGCSYVHCDVTKEKDIENAV-   83 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~---~~~~~~~~~~~v~~~~~D~~~~~~v~~~~-   83 (257)
                      ..+.|+++.|.|. |.||+++|+.|...|++|+..+|+........+   .+.+... ..++..+.+..+..  ...++ 
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~-~aDiVil~lP~t~~--t~~li~  217 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIK-DADIISLHVPANKE--SYHLFD  217 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHh-cCCEEEEeCCCcHH--HHHHHh
Confidence            4689999999987 889999999999999999999987653222111   1111111 13366666666532  22222 


Q ss_pred             HHHHHHcCCccEEEeCCC
Q 044485           84 NTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag  101 (257)
                      ++..... +.+.++-|++
T Consensus       218 ~~~l~~m-k~gavlIN~a  234 (330)
T PRK12480        218 KAMFDHV-KKGAILVNAA  234 (330)
T ss_pred             HHHHhcC-CCCcEEEEcC
Confidence            3333332 3556666655

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=95.92  E-value=0.07  Score=46.93  Aligned_cols=74  Identities=12%  Similarity=0.157  Sum_probs=52.2

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -..|+++|+|++ .+|+.+++.+.+.|++|++++.++......   ..        =..+..|..|.+.+.+++++.   
T Consensus        10 ~~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~a--------d~~~~~~~~d~~~l~~~~~~~---   74 (395)
T PRK09288         10 PSATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---VA--------HRSHVIDMLDGDALRAVIERE---   74 (395)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---hh--------hheEECCCCCHHHHHHHHHHh---
Confidence            356799999874 699999999999999999998776432111   10        024567888888777766532   


Q ss_pred             cCCccEEEeCC
Q 044485           90 YGKLDIMFNNA  100 (257)
Q Consensus        90 ~~~id~lv~~a  100 (257)
                        .+|.++...
T Consensus        75 --~id~vi~~~   83 (395)
T PRK09288         75 --KPDYIVPEI   83 (395)
T ss_pred             --CCCEEEEee
Confidence              589888643

>PRK08328 hypothetical protein; Provisional

Probab=95.92  E-value=0.036  Score=45.06  Aligned_cols=40  Identities=20%  Similarity=0.295  Sum_probs=33.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhh
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLG   49 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~   49 (257)
                      .+.+++|+|.|+ ||+|.++++.|+..|.. +++++.+.-..
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~   64 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPEL   64 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccCh
Confidence            567889999987 89999999999999976 88888765443

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=95.89  E-value=0.044  Score=46.95  Aligned_cols=76  Identities=13%  Similarity=0.121  Sum_probs=47.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-------eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHH--HHH-
Q 044485           14 VALITGGARGIGECTARLFSKHGA-------KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIE--NAV-   83 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~-------~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~--~~~-   83 (257)
                      ++.|+|++|.+|.+++..|+..+.       .+++.++++... +              ......|+.|.....  ... 
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-~--------------a~g~~~Dl~d~~~~~~~~~~~   65 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-V--------------LEGVVMELMDCAFPLLDGVVP   65 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-c--------------cceeEeehhcccchhcCceec
Confidence            478999999999999999998663       599999865421 0              122234444443110  000 


Q ss_pred             -HHHHHHcCCccEEEeCCCCCC
Q 044485           84 -NTAVTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        84 -~~~~~~~~~id~lv~~ag~~~  104 (257)
                       ....+.....|++|+.||...
T Consensus        66 ~~~~~~~~~~aDiVVitAG~~~   87 (324)
T TIGR01758        66 THDPAVAFTDVDVAILVGAFPR   87 (324)
T ss_pred             cCChHHHhCCCCEEEEcCCCCC
Confidence             011223347999999999753

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK07411 hypothetical protein; Validated

Probab=95.88  E-value=0.046  Score=48.07  Aligned_cols=36  Identities=25%  Similarity=0.374  Sum_probs=31.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIK   45 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~   45 (257)
                      .+.+.+|+|.|+ ||+|..+++.|+..|.. +++++.+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            577889999987 89999999999999976 7777654

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.88  E-value=0.057  Score=42.79  Aligned_cols=37  Identities=24%  Similarity=0.362  Sum_probs=31.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKD   46 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   46 (257)
                      .+++.+++|.|+ ||+|..+++.|+..|.. +++++.+.
T Consensus        16 ~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~   53 (198)
T cd01485          16 KLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRL   53 (198)
T ss_pred             HHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCc
Confidence            577889999988 55999999999999987 88887653

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=95.86  E-value=0.021  Score=43.91  Aligned_cols=156  Identities=13%  Similarity=0.083  Sum_probs=88.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcC-C-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHG-A-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g-~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      +.+.++.++|.||||-.|..+.+++.+.+ + .|++..|++..-.++-+          .+.....|++..++...    
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~k----------~v~q~~vDf~Kl~~~a~----   79 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATDK----------VVAQVEVDFSKLSQLAT----   79 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccccc----------eeeeEEechHHHHHHHh----
Confidence            35678999999999999999999999997 3 48888887533222211          14445566654443332    


Q ss_pred             HHHHcCCccEEEeCCCCCCCCC--CCCCCCCHHHHHHHHhhh-chhhhHHHHHHHhhhccccCCCCchhhhhHHHHHHHH
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVK--PNILDNDQAEFERILSIN-LVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLM  162 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~--~~~~~~~~~~~~~~~~~n-~~~~~~l~~~~~s~~~~~~~~~~~~y~~sK~a~~~~~  162 (257)
                         .+.++|+++++-|......  ..+...+.+.....-+.. -.|.-  ...+.|..+.-+. ....|-..|.-++.=+
T Consensus        80 ---~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck--~fvLvSS~GAd~s-SrFlY~k~KGEvE~~v  153 (238)
T KOG4039|consen   80 ---NEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCK--TFVLVSSAGADPS-SRFLYMKMKGEVERDV  153 (238)
T ss_pred             ---hhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhCCCe--EEEEEeccCCCcc-cceeeeeccchhhhhh
Confidence               3347999999988654211  123333332222111000 00000  0001222222221 1346788888887766


Q ss_pred             HHHHHHhccCCcEEEeecCCCccChhh
Q 044485          163 KNTAVELGRFGIRVNCVSPYAVSTPLA  189 (257)
Q Consensus       163 ~~l~~e~~~~gi~v~~i~pg~v~t~~~  189 (257)
                      -.|-.+      ++..+.||++..+..
T Consensus       154 ~eL~F~------~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  154 IELDFK------HIIILRPGPLLGERT  174 (238)
T ss_pred             hhcccc------EEEEecCcceecccc
Confidence            554433      788899999876544

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=95.85  E-value=0.068  Score=46.65  Aligned_cols=79  Identities=22%  Similarity=0.366  Sum_probs=52.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCH-HHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKE-KDIENAVNTAVT   88 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~~   88 (257)
                      .+.+++|.| .+++|.++++.+...|+ +|+.++++.++++.+ +++..        . ...+..+. +.....+.++..
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~lGa--------~-~~i~~~~~~~~~~~~v~~~~~  258 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KELGA--------T-ECINPQDYKKPIQEVLTEMTD  258 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCC--------c-eEecccccchhHHHHHHHHhC
Confidence            578999996 59999999999999999 799999888776555 33321        0 11222221 123333333332


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                        +++|.++++.|.
T Consensus       259 --~~~d~vld~~g~  270 (373)
T cd08299         259 --GGVDFSFEVIGR  270 (373)
T ss_pred             --CCCeEEEECCCC
Confidence              469999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.85  E-value=0.036  Score=46.68  Aligned_cols=79  Identities=20%  Similarity=0.213  Sum_probs=54.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEee-CcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIAD-IKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++.||+++|.|-++-+|+.+|+.|.++|++|+++. |+. .+++..+.          ..++.+=+.+++.++..+   
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~-~l~e~~~~----------ADIVIsavg~~~~v~~~~---  219 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR-DLPAVCRR----------ADILVAAVGRPEMVKGDW---  219 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC-CHHHHHhc----------CCEEEEecCChhhcchhe---
Confidence            378999999999999999999999999999999884 654 33333221          233444455666555433   


Q ss_pred             HHHcCCccEEEeCCCCCC
Q 044485           87 VTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~  104 (257)
                          -+...+|-+.|+..
T Consensus       220 ----lk~GavVIDvGin~  233 (296)
T PRK14188        220 ----IKPGATVIDVGINR  233 (296)
T ss_pred             ----ecCCCEEEEcCCcc
Confidence                14566777777653

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.84  E-value=0.024  Score=43.19  Aligned_cols=38  Identities=29%  Similarity=0.352  Sum_probs=33.7

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI   44 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r   44 (257)
                      ++.+++||.++|.|| |.+|...++.|.+.|++|++++.
T Consensus         7 ~~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719          7 LMFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             eEEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            345899999999998 88999999999999999988853

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.84  E-value=0.076  Score=42.33  Aligned_cols=40  Identities=28%  Similarity=0.482  Sum_probs=35.1

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      +.+++||.+||.|| |.+|..-++.|.+.|++|++++.+..
T Consensus         4 ~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         4 FANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EEEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            35789999999998 88999999999999999999987643

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=95.84  E-value=0.044  Score=39.86  Aligned_cols=66  Identities=23%  Similarity=0.360  Sum_probs=45.5

Q ss_pred             chHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC--CccEEEeCC
Q 044485           23 GIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG--KLDIMFNNA  100 (257)
Q Consensus        23 giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~--~id~lv~~a  100 (257)
                      |+|...++-+...|++|+++++++++++.+. ++.        .. ...|-.+.+    +.+++++..+  ++|++|.|+
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~G--------a~-~~~~~~~~~----~~~~i~~~~~~~~~d~vid~~   66 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELG--------AD-HVIDYSDDD----FVEQIRELTGGRGVDVVIDCV   66 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTT--------ES-EEEETTTSS----HHHHHHHHTTTSSEEEEEESS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhc--------cc-ccccccccc----cccccccccccccceEEEEec
Confidence            6899999999999999999999988765553 332        11 124444444    3444444443  699999999


Q ss_pred             CC
Q 044485          101 GT  102 (257)
Q Consensus       101 g~  102 (257)
                      |.
T Consensus        67 g~   68 (130)
T PF00107_consen   67 GS   68 (130)
T ss_dssp             SS
T ss_pred             Cc
Confidence            93

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=95.83  E-value=0.029  Score=41.95  Aligned_cols=77  Identities=23%  Similarity=0.360  Sum_probs=51.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCCCC-CCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           14 VALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSSS-ASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ++.|+|++|.+|.+++..|...+.  ++++.+++++.++-...++...... ...+....   .+.+.+           
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~-----------   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEAL-----------   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccccc-----------
Confidence            689999999999999999999984  5999999987665555444332110 01122222   233322           


Q ss_pred             CCccEEEeCCCCCC
Q 044485           91 GKLDIMFNNAGTVD  104 (257)
Q Consensus        91 ~~id~lv~~ag~~~  104 (257)
                      ...|++|..+|...
T Consensus        68 ~~aDivvitag~~~   81 (141)
T PF00056_consen   68 KDADIVVITAGVPR   81 (141)
T ss_dssp             TTESEEEETTSTSS
T ss_pred             ccccEEEEeccccc
Confidence            36999999999753

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.82  E-value=0.023  Score=47.80  Aligned_cols=42  Identities=17%  Similarity=0.321  Sum_probs=36.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKD   55 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~   55 (257)
                      ++|.|.|+ |-+|..+|..|+..|+.|++.+++++.+++..+.
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~   47 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNR   47 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH
Confidence            46778887 8999999999999999999999999887765444

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=95.82  E-value=0.13  Score=55.22  Aligned_cols=164  Identities=16%  Similarity=0.107  Sum_probs=93.9

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +.++..+|++.+++++.+++..|.++|+.|+++..... ........      ...+..+.+.-.|..++..+++.+...
T Consensus      1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1825 (2582)
T TIGR02813      1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSHSASPL------ASAIASVTLGTIDDTSIEAVIKDIEEK 1825 (2582)
T ss_pred             ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-cccccccc------ccccccccccccchHHHHHHHHhhhcc
Confidence            45788888888999999999999999999887642211 00000000      111333455556778888888888777


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------hhccccCCCCchh---------
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------VCGIIGGAATHAY---------  151 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------~~~~~~~~~~~~y---------  151 (257)
                      .+.++.+||..+...............+...   ..+...+.+.+.+..         ........+...|         
T Consensus      1826 ~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~---~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~ 1902 (2582)
T TIGR02813      1826 TAQIDGFIHLQPQHKSVADKVDAIELPEAAK---QSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGT 1902 (2582)
T ss_pred             ccccceEEEeccccccccccccccccchhhH---HHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccc
Confidence            7889999997775422001111110000000   111222333333210         1111111111222         


Q ss_pred             -----hhhHHHHHHHHHHHHHHhccCCcEEEeecCCC
Q 044485          152 -----TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYA  183 (257)
Q Consensus       152 -----~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~  183 (257)
                           ....+++.+|+|++++|+..--+|...+.|..
T Consensus      1903 ~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~~ 1939 (2582)
T TIGR02813      1903 QQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPKL 1939 (2582)
T ss_pred             cccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCCc
Confidence                 23578999999999999988777888888864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=95.81  E-value=0.063  Score=46.69  Aligned_cols=80  Identities=20%  Similarity=0.340  Sum_probs=51.6

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCH-HHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKE-KDIENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~   87 (257)
                      ..+.+++|.|+ +++|...++.+...|+ +|+.++++.++.+.+ +++...       .+  .|..+. ..+.+.+.+..
T Consensus       183 ~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-------~~--i~~~~~~~~~~~~~~~~~  251 (365)
T cd08277         183 EPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEFGAT-------DF--INPKDSDKPVSEVIREMT  251 (365)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCC-------cE--eccccccchHHHHHHHHh
Confidence            35789999975 9999999998888999 699998887766544 333210       11  222221 12233333333


Q ss_pred             HHcCCccEEEeCCCC
Q 044485           88 TQYGKLDIMFNNAGT  102 (257)
Q Consensus        88 ~~~~~id~lv~~ag~  102 (257)
                      .  +++|++|.+.|.
T Consensus       252 ~--~g~d~vid~~g~  264 (365)
T cd08277         252 G--GGVDYSFECTGN  264 (365)
T ss_pred             C--CCCCEEEECCCC
Confidence            2  469999999883

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.80  E-value=0.047  Score=47.04  Aligned_cols=79  Identities=25%  Similarity=0.424  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .+++++|+|+ +++|..+++.+...|+ .|++++++.++.+.+ .++.        +. ...|..+.+..+. +.+....
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~g--------a~-~~i~~~~~~~~~~-l~~~~~~  239 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EELG--------AT-IVLDPTEVDVVAE-VRKLTGG  239 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhC--------CC-EEECCCccCHHHH-HHHHhCC
Confidence            5789999985 8999999999999999 788888877765544 3331        11 1134444332222 2222111


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                       +++|+++.+.|.
T Consensus       240 -~~~d~vid~~g~  251 (351)
T cd08233         240 -GGVDVSFDCAGV  251 (351)
T ss_pred             -CCCCEEEECCCC
Confidence             249999999873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.80  E-value=0.029  Score=46.85  Aligned_cols=43  Identities=26%  Similarity=0.295  Sum_probs=37.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGE   50 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~   50 (257)
                      .++.||.++|.|.|.-+|+.++..|.++|++|.++......+.
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~  195 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLS  195 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHH
Confidence            4789999999999999999999999999999988765544443

>PLN02827 Alcohol dehydrogenase-like

Probab=95.79  E-value=0.065  Score=46.89  Aligned_cols=80  Identities=21%  Similarity=0.300  Sum_probs=52.1

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCH-HHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKE-KDIENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~   87 (257)
                      ..+.++||.|+ |++|...++.+...|+. |+++++++++.+.+ +++.        +.. ..|..+. ++..+.++++.
T Consensus       192 ~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~lG--------a~~-~i~~~~~~~~~~~~v~~~~  260 (378)
T PLN02827        192 SKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTFG--------VTD-FINPNDLSEPIQQVIKRMT  260 (378)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcC--------CcE-EEcccccchHHHHHHHHHh
Confidence            35889999985 99999999999899985 77777777665443 3332        111 1233332 23444444433


Q ss_pred             HHcCCccEEEeCCCC
Q 044485           88 TQYGKLDIMFNNAGT  102 (257)
Q Consensus        88 ~~~~~id~lv~~ag~  102 (257)
                      .  +++|++|.+.|.
T Consensus       261 ~--~g~d~vid~~G~  273 (378)
T PLN02827        261 G--GGADYSFECVGD  273 (378)
T ss_pred             C--CCCCEEEECCCC
Confidence            2  369999999984

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.78  E-value=0.056  Score=43.98  Aligned_cols=32  Identities=22%  Similarity=0.353  Sum_probs=26.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc
Q 044485           14 VALITGGARGIGECTARLFSKHGAK-VLIADIKD   46 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   46 (257)
                      +++|.|+ ||+|..+++.|+..|.. +.+++.+.
T Consensus         1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~   33 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDT   33 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3678875 89999999999999976 88887754

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.76  E-value=0.05  Score=48.65  Aligned_cols=41  Identities=22%  Similarity=0.411  Sum_probs=35.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhh
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG   49 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~   49 (257)
                      ..+.||+++|.|.+ .||+.+|+++...|++|+++.+++...
T Consensus       250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            36899999999985 699999999999999999998876543

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=95.75  E-value=0.037  Score=51.13  Aligned_cols=37  Identities=22%  Similarity=0.297  Sum_probs=32.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKD   46 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   46 (257)
                      .+.+.++||.|+ ||+|..+++.|++.|.. +++++.+.
T Consensus       335 kL~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~  372 (664)
T TIGR01381       335 RYSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGK  372 (664)
T ss_pred             HHhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCE
Confidence            567889999998 99999999999999986 88887643

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.74  E-value=0.061  Score=36.38  Aligned_cols=36  Identities=31%  Similarity=0.634  Sum_probs=30.9

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHc-CCeEEEeeC
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKH-GAKVLIADI   44 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r   44 (257)
                      .++.+++++|.|+ |+.|+.+++.|.+. +..|.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            3578999999999 99999999999998 466777766

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.73  E-value=0.057  Score=46.21  Aligned_cols=38  Identities=16%  Similarity=0.221  Sum_probs=33.7

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      ..++++||.|+++++|.++++.....|++|+.+.++.+
T Consensus       145 ~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         145 QPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            36789999999999999999999999999888877653

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.73  E-value=0.058  Score=47.51  Aligned_cols=36  Identities=25%  Similarity=0.430  Sum_probs=30.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIK   45 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~   45 (257)
                      .+.+.+|+|.|+ ||+|..+++.|+..|.. +.+++.+
T Consensus        39 ~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         39 RLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            467889999987 89999999999999975 7777653

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.72  E-value=0.075  Score=45.46  Aligned_cols=76  Identities=20%  Similarity=0.408  Sum_probs=50.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..++++||.| ++++|.++++.+...|++|+.+++++++++.+ +++..       -.+  .|..+.+ ....+.+.   
T Consensus       162 ~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~-------~~~--i~~~~~~-~~~~~~~~---  226 (333)
T cd08296         162 KPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKLGA-------HHY--IDTSKED-VAEALQEL---  226 (333)
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHcCC-------cEE--ecCCCcc-HHHHHHhc---
Confidence            3578999999 79999999999999999999999987765544 44421       011  2332222 22222222   


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                       +++|.++.+.|
T Consensus       227 -~~~d~vi~~~g  237 (333)
T cd08296         227 -GGAKLILATAP  237 (333)
T ss_pred             -CCCCEEEECCC
Confidence             36999998765

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.72  E-value=0.049  Score=45.46  Aligned_cols=41  Identities=32%  Similarity=0.387  Sum_probs=33.7

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHh
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGES   51 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~   51 (257)
                      ..++++||.|+ |++|...++.+...|+. |+++++++++++.
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~  160 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL  160 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            46889999987 89999999999899997 8888777766543

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=95.68  E-value=0.066  Score=45.31  Aligned_cols=41  Identities=22%  Similarity=0.404  Sum_probs=35.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      +.+++|.|+++++|.++++.....|++|+++.+++++.+.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL  187 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            46899999999999999998889999999999888765544

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.66  E-value=0.076  Score=45.96  Aligned_cols=41  Identities=22%  Similarity=0.292  Sum_probs=34.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESV   52 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~   52 (257)
                      .++++||+| ++++|.++++.+...|+ +|+++++++++.+.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~  218 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA  218 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            688999997 59999999999999999 899888877665433

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PLN02928 oxidoreductase family protein

Probab=95.66  E-value=0.053  Score=46.89  Aligned_cols=37  Identities=30%  Similarity=0.301  Sum_probs=34.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      .+.||++.|.|. |.||+++|+.|...|++|+..+|+.
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            688999999997 9999999999999999999998864

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.64  E-value=0.079  Score=47.46  Aligned_cols=79  Identities=22%  Similarity=0.280  Sum_probs=51.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.+|+++|+|.+ ++|.++|+.|+++|+.|.+.+.+....  ..+++....   ..+.++..... ..    ..     
T Consensus         2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~---~gi~~~~g~~~-~~----~~-----   65 (445)
T PRK04308          2 TFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMF---DGLVFYTGRLK-DA----LD-----   65 (445)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhcc---CCcEEEeCCCC-HH----HH-----
Confidence            3668999999985 999999999999999999988765421  112222210   11444433322 11    11     


Q ss_pred             HcCCccEEEeCCCCCCC
Q 044485           89 QYGKLDIMFNNAGTVDE  105 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~  105 (257)
                        ...|.||...|+...
T Consensus        66 --~~~d~vv~spgi~~~   80 (445)
T PRK04308         66 --NGFDILALSPGISER   80 (445)
T ss_pred             --hCCCEEEECCCCCCC
Confidence              258999999998643

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=95.62  E-value=0.058  Score=46.01  Aligned_cols=43  Identities=26%  Similarity=0.426  Sum_probs=37.6

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      ..+.+++|.|+++.+|.++++.+...|+.|+.+.++.++.+.+
T Consensus       161 ~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        161 KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3578999999999999999999999999999998887766554

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.61  E-value=0.028  Score=46.88  Aligned_cols=44  Identities=16%  Similarity=0.259  Sum_probs=38.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHh
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDI   56 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~   56 (257)
                      +++++|.|+ ||.+++++..|++.|+. |+++.|+.++.+++.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            568999997 99999999999999985 999999998877776654

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.60  E-value=0.035  Score=51.29  Aligned_cols=73  Identities=12%  Similarity=0.111  Sum_probs=55.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      ..++|.|. |.+|+.+++.|.++|.+|++++.+++..++..++         ....+.+|.+|++.++++=-      .+
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~---------g~~~i~GD~~~~~~L~~a~i------~~  481 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRER---------GIRAVLGNAANEEIMQLAHL------DC  481 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHC---------CCeEEEcCCCCHHHHHhcCc------cc
Confidence            46777776 8999999999999999999999998776666431         17789999999887665311      25


Q ss_pred             ccEEEeCCC
Q 044485           93 LDIMFNNAG  101 (257)
Q Consensus        93 id~lv~~ag  101 (257)
                      .|.++-+.+
T Consensus       482 a~~viv~~~  490 (558)
T PRK10669        482 ARWLLLTIP  490 (558)
T ss_pred             cCEEEEEcC
Confidence            676665544

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=95.59  E-value=0.057  Score=46.49  Aligned_cols=41  Identities=29%  Similarity=0.310  Sum_probs=34.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESV   52 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~   52 (257)
                      .+++++|+|+ +++|..+++.+...|+. |+.+++++++++.+
T Consensus       160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~  201 (347)
T PRK10309        160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALA  201 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            5789999975 99999999999999997 67888887766544

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.57  E-value=0.032  Score=44.42  Aligned_cols=38  Identities=24%  Similarity=0.282  Sum_probs=34.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      .+++||.+||.|| |.+|...++.|.+.|++|++++++.
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            4799999999998 9999999999999999999988754

>PRK14852 hypothetical protein; Provisional

Probab=95.56  E-value=0.062  Score=52.04  Aligned_cols=83  Identities=16%  Similarity=0.190  Sum_probs=55.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc-------------------hhhHhHHHHhccCCCCCCCcee
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKD-------------------DLGESVCKDIGSSSSSASGCSY   68 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~v~~   68 (257)
                      .+.+.+|+|.|+ ||+|..++..|+..|.. +.+++.+.                   .+.+.+.+.+.+..+ ..+|..
T Consensus       329 kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP-~v~I~~  406 (989)
T PRK14852        329 RLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNP-FLDIRS  406 (989)
T ss_pred             HHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCC-CCeEEE
Confidence            578899999995 89999999999999975 77765432                   233334444544433 345767


Q ss_pred             EecCCCCHHHHHHHHHHHHHHcCCccEEEeCCC
Q 044485           69 VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        69 ~~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag  101 (257)
                      +...++ ++.+.++++       .+|+||.+.-
T Consensus       407 ~~~~I~-~en~~~fl~-------~~DiVVDa~D  431 (989)
T PRK14852        407 FPEGVA-AETIDAFLK-------DVDLLVDGID  431 (989)
T ss_pred             EecCCC-HHHHHHHhh-------CCCEEEECCC
Confidence            766663 455555544       5777777554

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.53  E-value=0.034  Score=46.43  Aligned_cols=45  Identities=27%  Similarity=0.268  Sum_probs=38.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      .++.||+++|.|.|.-+|+.++..|.++|++|+++.+..+.+.+.
T Consensus       154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~  198 (285)
T PRK14189        154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAH  198 (285)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHH
Confidence            468999999999999999999999999999998876655544433

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=95.53  E-value=0.075  Score=44.05  Aligned_cols=89  Identities=15%  Similarity=0.244  Sum_probs=55.9

Q ss_pred             CCcEEEEecCCCchHHHH--HHHHHHcCCeEEEeeCcchhh-----------HhHHHHhccCCCCCCCceeEecCCCCHH
Q 044485           11 QGKVALITGGARGIGECT--ARLFSKHGAKVLIADIKDDLG-----------ESVCKDIGSSSSSASGCSYVHCDVTKEK   77 (257)
Q Consensus        11 ~~k~~lItGas~giG~~i--a~~l~~~g~~Vi~~~r~~~~~-----------~~~~~~~~~~~~~~~~v~~~~~D~~~~~   77 (257)
                      -.|++||.|+|+|.|.+.  +..|. .|++-+.+.-..+..           .....+.....  +....-+..|.-+-+
T Consensus        40 gPKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~k--GlyAksingDaFS~e  116 (398)
T COG3007          40 GPKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQK--GLYAKSINGDAFSDE  116 (398)
T ss_pred             CCceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhc--CceeeecccchhhHH
Confidence            358999999999999873  33333 456655543211100           01111111111  122455778888888


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCCC
Q 044485           78 DIENAVNTAVTQYGKLDIMFNNAGT  102 (257)
Q Consensus        78 ~v~~~~~~~~~~~~~id~lv~~ag~  102 (257)
                      --+.+++.+++.+|.+|.+|+.-+.
T Consensus       117 ~k~kvIe~Ik~~~g~vDlvvYSlAs  141 (398)
T COG3007         117 MKQKVIEAIKQDFGKVDLVVYSLAS  141 (398)
T ss_pred             HHHHHHHHHHHhhccccEEEEeccC
Confidence            8888899999999999999997553

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.51  E-value=0.038  Score=46.11  Aligned_cols=45  Identities=13%  Similarity=0.049  Sum_probs=39.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      .++.||.++|.|-|.-+|+.++..|..+|++|+++.+....+++.
T Consensus       155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~  199 (285)
T PRK10792        155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHH  199 (285)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHH
Confidence            478999999999999999999999999999999988766555443

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=95.50  E-value=0.1  Score=44.78  Aligned_cols=79  Identities=24%  Similarity=0.415  Sum_probs=52.2

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..+++++|.| .+++|..+++.+...|++|+.+.++.++.+.+ ++..        +. ...|..++.+....+..... 
T Consensus       164 ~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g--------~~-~~i~~~~~~~~~~~~~~~~~-  231 (345)
T cd08260         164 KPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELA-RELG--------AV-ATVNASEVEDVAAAVRDLTG-  231 (345)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHhC--------CC-EEEccccchhHHHHHHHHhC-
Confidence            3578999999 69999999999999999999998887765555 3331        11 11233331233333333322 


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                       +++|.++.+.|
T Consensus       232 -~~~d~vi~~~g  242 (345)
T cd08260         232 -GGAHVSVDALG  242 (345)
T ss_pred             -CCCCEEEEcCC
Confidence             26999999876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.50  E-value=0.061  Score=45.81  Aligned_cols=38  Identities=29%  Similarity=0.324  Sum_probs=34.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      .++.||++.|.|- |.||+++|+.+...|++|+..+|..
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~  178 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSG  178 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCc
Confidence            3689999999987 9999999999999999999988753

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=95.46  E-value=0.62  Score=38.51  Aligned_cols=83  Identities=11%  Similarity=0.125  Sum_probs=49.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc-CCeEEE-eeCcchhhHhH-------HHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKH-GAKVLI-ADIKDDLGESV-------CKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~-g~~Vi~-~~r~~~~~~~~-------~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      .++.|+|++|.+|+.+++.+.+. ++.|+. ++++.+.....       ...+...-. .  +. +.+|++.++...+.+
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~~~~~i~~~~dl~~ll~-~--~D-vVid~t~p~~~~~~~   77 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQGALGVAITDDLEAVLA-D--AD-VLIDFTTPEATLENL   77 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccCCCCccccCCHHHhcc-C--CC-EEEECCCHHHHHHHH
Confidence            37899999999999999988864 678554 55554332111       000000000 0  11 346777777777777


Q ss_pred             HHHHHHcCCccEEEeCCC
Q 044485           84 NTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag  101 (257)
                      ....+.  ++++++-..|
T Consensus        78 ~~al~~--G~~vvigttG   93 (257)
T PRK00048         78 EFALEH--GKPLVIGTTG   93 (257)
T ss_pred             HHHHHc--CCCEEEECCC
Confidence            666655  5777755444

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=95.45  E-value=0.099  Score=44.59  Aligned_cols=41  Identities=29%  Similarity=0.433  Sum_probs=35.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchhhHhH
Q 044485           12 GKVALITGGARGIGECTARLFSKH-GAKVLIADIKDDLGESV   52 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~   52 (257)
                      +.++||.|+++++|.++++..... |++|+.+.+++++.+.+
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l  190 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV  190 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH
Confidence            789999999999999998888777 99999998887665444

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.45  E-value=0.12  Score=42.30  Aligned_cols=80  Identities=16%  Similarity=0.277  Sum_probs=57.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|.++||--|.||.|..+++.+...|+.+|.+..+.++.+.+.+.=         + -+..|.+.++-++++ .++..- 
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~akenG---------~-~h~I~y~~eD~v~~V-~kiTng-  213 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKENG---------A-EHPIDYSTEDYVDEV-KKITNG-  213 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcC---------C-cceeeccchhHHHHH-HhccCC-
Confidence            5789999999999999999999999999999988877665554321         1 134566666555443 333221 


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                      .++|++....|.
T Consensus       214 KGVd~vyDsvG~  225 (336)
T KOG1197|consen  214 KGVDAVYDSVGK  225 (336)
T ss_pred             CCceeeeccccc
Confidence            268998888774

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.45  E-value=0.025  Score=48.10  Aligned_cols=39  Identities=26%  Similarity=0.300  Sum_probs=33.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      +++.|+| .|-+|.+++..|++.|++|++.+|+++..+..
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~   41 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAA   41 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHH
Confidence            3688998 68899999999999999999999998766554

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=95.44  E-value=0.069  Score=45.42  Aligned_cols=80  Identities=18%  Similarity=0.272  Sum_probs=52.1

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..+.+++|.|+++.+|.++++.+...|++|+.+.++.++.+.+ +++..       -.++  +..+. +....+.+....
T Consensus       139 ~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~g~-------~~~~--~~~~~-~~~~~~~~~~~~  207 (327)
T PRK10754        139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKAGA-------WQVI--NYREE-NIVERVKEITGG  207 (327)
T ss_pred             CCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCC-------CEEE--cCCCC-cHHHHHHHHcCC
Confidence            3578999999999999999999999999999888877665444 33321       1122  22222 222223332221


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                       .++|+++++.+
T Consensus       208 -~~~d~vl~~~~  218 (327)
T PRK10754        208 -KKVRVVYDSVG  218 (327)
T ss_pred             -CCeEEEEECCc
Confidence             25899999876

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.44  E-value=0.15  Score=43.43  Aligned_cols=39  Identities=13%  Similarity=0.024  Sum_probs=34.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      ..+.+|++.|.|- |.||+.+|+.|...|++|+..+|..+
T Consensus       132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~  170 (312)
T PRK15469        132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRK  170 (312)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            3578999999986 89999999999999999999887653

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.43  E-value=0.039  Score=45.92  Aligned_cols=43  Identities=23%  Similarity=0.213  Sum_probs=36.9

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGE   50 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~   50 (257)
                      .+++||.++|.|.|.-+|+.++..|.++|++|.++....+.+.
T Consensus       153 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~  195 (281)
T PRK14183        153 IDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLK  195 (281)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHH
Confidence            4789999999999999999999999999999987765544443

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.41  E-value=0.047  Score=45.61  Aligned_cols=45  Identities=18%  Similarity=0.240  Sum_probs=38.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      .++.||.++|.|.|.-+|+.++..|.++|++|+++......+++.
T Consensus       154 i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~  198 (284)
T PRK14190        154 IDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAEL  198 (284)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHH
Confidence            478999999999999999999999999999998886655544443

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=95.38  E-value=0.11  Score=44.37  Aligned_cols=142  Identities=11%  Similarity=0.007  Sum_probs=78.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-------eEEEeeCcchh--hHhHHHHhccCC-CCCCCceeEecCCCCHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGA-------KVLIADIKDDL--GESVCKDIGSSS-SSASGCSYVHCDVTKEKDIENA   82 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~-------~Vi~~~r~~~~--~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~   82 (257)
                      +++.|+|++|.+|.+++..|+..|.       .+++.+.++..  ++-...++.... .-...+.   ..-.+.      
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~---i~~~~~------   73 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV---ITDDPN------   73 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE---EecCcH------
Confidence            5899999999999999999998884       69999985432  332222332211 0000111   111111      


Q ss_pred             HHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH--------------------Hhh-hc
Q 044485           83 VNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML--------------------LGV-CG  141 (257)
Q Consensus        83 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~--------------------~s~-~~  141 (257)
                           +....-|++|.+||....   +  ..+..+   .+..|+.-.-.+...+                    ... .-
T Consensus        74 -----~~~~daDivvitaG~~~k---~--g~tR~d---ll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k  140 (322)
T cd01338          74 -----VAFKDADWALLVGAKPRG---P--GMERAD---LLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMK  140 (322)
T ss_pred             -----HHhCCCCEEEEeCCCCCC---C--CCcHHH---HHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHH
Confidence                 122369999999997532   1  223222   2233322221111111                    000 11


Q ss_pred             ccc-CCCCchhhhhHHHHHHHHHHHHHHhcc--CCcEE
Q 044485          142 IIG-GAATHAYTSSKHGLLGLMKNTAVELGR--FGIRV  176 (257)
Q Consensus       142 ~~~-~~~~~~y~~sK~a~~~~~~~l~~e~~~--~gi~v  176 (257)
                      ..+ .+....|+.++.--..|...+++.+.-  ..|+.
T Consensus       141 ~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~  178 (322)
T cd01338         141 NAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN  178 (322)
T ss_pred             HcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence            222 455667888999999999999988753  44554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=95.38  E-value=0.096  Score=40.29  Aligned_cols=98  Identities=13%  Similarity=0.153  Sum_probs=56.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC-------------
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK-------------   75 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-------------   75 (257)
                      .+...+++|+|+ |-.|...++.|...|++|+..+.....+++.....         ...+..+..+             
T Consensus        17 ~~~p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~---------~~~i~~~~~~~~~~~~~~~~~~~   86 (168)
T PF01262_consen   17 GVPPAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLG---------AYFIEVDYEDHLERKDFDKADYY   86 (168)
T ss_dssp             EE-T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTT---------TEESEETTTTTTTSB-CCHHHCH
T ss_pred             CCCCeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhccc---------CceEEEcccccccccccchhhhh
Confidence            466788999985 89999999999999999999988876655443321         2222232111             


Q ss_pred             --HHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHH
Q 044485           76 --EKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERI  121 (257)
Q Consensus        76 --~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~  121 (257)
                        ++.-+..+.+..   ...|++|.|+-++..  ....-++.++...+
T Consensus        87 ~~~~~~~~~f~~~i---~~~d~vI~~~~~~~~--~~P~lvt~~~~~~m  129 (168)
T PF01262_consen   87 EHPESYESNFAEFI---APADIVIGNGLYWGK--RAPRLVTEEMVKSM  129 (168)
T ss_dssp             HHCCHHHHHHHHHH---HH-SEEEEHHHBTTS--S---SBEHHHHHTS
T ss_pred             HHHHHhHHHHHHHH---hhCcEEeeecccCCC--CCCEEEEhHHhhcc
Confidence              122222333322   247999988877654  33444566665554

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.38  E-value=0.042  Score=45.90  Aligned_cols=45  Identities=27%  Similarity=0.293  Sum_probs=38.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      .++.||.++|.|.|.-+|+.++..|.++|++|+++.+....+++.
T Consensus       151 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~  195 (287)
T PRK14173        151 IPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAV  195 (287)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            478999999999999999999999999999998776655554443

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=95.37  E-value=0.058  Score=44.73  Aligned_cols=85  Identities=16%  Similarity=0.218  Sum_probs=64.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|-+++--||+++.|+++.+--...|.+-+-+-|+.+..+++.+.+...+-..  |      +++++--..-.......+
T Consensus       160 ~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~--V------iTeeel~~~~~~k~~~~~  231 (354)
T KOG0025|consen  160 KGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATE--V------ITEEELRDRKMKKFKGDN  231 (354)
T ss_pred             CCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCce--E------ecHHHhcchhhhhhhccC
Confidence            56789999999999999999999999998888899999999999998765321  1      333333333344444456


Q ss_pred             CCccEEEeCCCCC
Q 044485           91 GKLDIMFNNAGTV  103 (257)
Q Consensus        91 ~~id~lv~~ag~~  103 (257)
                      +++..-+||.|.-
T Consensus       232 ~~prLalNcVGGk  244 (354)
T KOG0025|consen  232 PRPRLALNCVGGK  244 (354)
T ss_pred             CCceEEEeccCch
Confidence            7899999999853

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=95.37  E-value=0.048  Score=48.15  Aligned_cols=83  Identities=17%  Similarity=0.225  Sum_probs=57.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +.+.++||.|| ||||..+.+-|+..|+. +.+++.+.-.+..+-.          +..+-+=|+..+++.  +..++.+
T Consensus        10 i~~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNLNR----------QFLFrkkhVgqsKA~--vA~~~v~   76 (603)
T KOG2013|consen   10 IKSGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNLNR----------QFLFRKKHVGQSKAT--VAAKAVK   76 (603)
T ss_pred             hccCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccchhh----------hheeehhhcCchHHH--HHHHHHH
Confidence            45778999998 89999999999999987 8888877654444422          244555566655543  2233444


Q ss_pred             Hc-CCccEEEeCCCCCCC
Q 044485           89 QY-GKLDIMFNNAGTVDE  105 (257)
Q Consensus        89 ~~-~~id~lv~~ag~~~~  105 (257)
                      +| +.++++-++|.+..+
T Consensus        77 ~Fnpn~~l~~yhanI~e~   94 (603)
T KOG2013|consen   77 QFNPNIKLVPYHANIKEP   94 (603)
T ss_pred             HhCCCCceEeccccccCc
Confidence            44 579999999887643

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.36  E-value=0.084  Score=45.30  Aligned_cols=36  Identities=28%  Similarity=0.499  Sum_probs=32.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      .+.++||.|+++++|.++++.....|++|+.+.++.
T Consensus       177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~  212 (350)
T cd08274         177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA  212 (350)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch
Confidence            578999999999999999999999999988887654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>smart00829 PKS_ER Enoylreductase

Probab=95.35  E-value=0.077  Score=43.67  Aligned_cols=43  Identities=23%  Similarity=0.360  Sum_probs=37.2

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      ..+.+++|.|+++++|..+++.+...|++|+.++++.+..+..
T Consensus       103 ~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  145 (288)
T smart00829      103 RPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFL  145 (288)
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3578999999999999999999999999999999887765544

Enoylreductase in Polyketide synthases.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.33  E-value=0.059  Score=44.91  Aligned_cols=81  Identities=16%  Similarity=0.310  Sum_probs=56.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|++++|.||+|..|.-+-+--.-.|+.|+...-+.++..-+..+..-     .    ...|--++..+..++++.... 
T Consensus       153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~-----d----~afNYK~e~~~~~aL~r~~P~-  222 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGF-----D----DAFNYKEESDLSAALKRCFPE-  222 (343)
T ss_pred             CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCC-----c----cceeccCccCHHHHHHHhCCC-
Confidence            579999999999999877776666799999888777765555444321     0    113444555666666554322 


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                       +||+.+-|.|.
T Consensus       223 -GIDiYfeNVGG  233 (343)
T KOG1196|consen  223 -GIDIYFENVGG  233 (343)
T ss_pred             -cceEEEeccCc
Confidence             79999999995

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	257
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		8e-50
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		5e-35
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		3e-34
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		5e-27
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		5e-27
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		8e-27
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		2e-26
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		8e-26
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		2e-25
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		3e-25
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		6e-25
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		7e-25
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		7e-25
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		7e-25
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		1e-24
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-23
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-23
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-23
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		8e-23
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-22
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		2e-22
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-22
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		2e-21
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		3e-21
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-21
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		9e-21
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		1e-20
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		1e-20
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		2e-20
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		2e-20
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-20
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		5e-20
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		7e-20
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		9e-20
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		1e-19
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		1e-19
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		2e-19
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		2e-19
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-19
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		3e-19
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-19
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		3e-19
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		3e-19
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-19
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		4e-19
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-19
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		7e-19
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		8e-19
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		9e-19
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		1e-18
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		1e-18
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		2e-18
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		2e-18
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		2e-18
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		3e-18
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		3e-18
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		3e-18
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		4e-18
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		4e-18
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		9e-18
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		1e-17
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		1e-17
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		1e-17
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		2e-17
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		2e-17
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-17
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-17
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-17
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		2e-17
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		3e-17
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		3e-17
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		3e-17
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		3e-17
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		4e-17
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		4e-17
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		5e-17
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		7e-17
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		8e-17
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		1e-16
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		1e-16
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		1e-16
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		1e-16
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		1e-16
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		2e-16
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		2e-16
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		2e-16
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		2e-16
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-16
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		2e-16
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		3e-16
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-16
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		4e-16
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		5e-16
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		6e-16
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		7e-16
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		8e-16
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		1e-15
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-15
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		1e-15
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		1e-15
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		2e-15
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		2e-15
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		6e-15
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		6e-15
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		6e-15
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		7e-15
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		7e-15
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		8e-15
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		1e-14
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		1e-14
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		1e-14
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		1e-14
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		1e-14
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-14
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		1e-14
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		2e-14
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		3e-14
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		3e-14
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		3e-14
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-14
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		4e-14
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		4e-14
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		9e-14
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		1e-13
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		1e-13
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		1e-13
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		1e-13
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		4e-13
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		5e-13
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		5e-13
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		6e-13
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		7e-13
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		7e-13
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		8e-13
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		9e-13
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-12
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		2e-12
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		2e-12
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		2e-12
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		2e-12
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		3e-12
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		3e-12
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		4e-12
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		4e-12
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		4e-12
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		6e-12
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		6e-12
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		9e-12
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		1e-11
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		1e-11
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		1e-11
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		1e-11
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		3e-11
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		3e-11
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		3e-11
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		4e-11
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		4e-11
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		5e-11
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		6e-11
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		7e-11
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		7e-11
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		1e-10
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		3e-10
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		3e-10
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		5e-10
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		7e-10
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		7e-10
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		1e-09
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		1e-09
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		1e-09
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		1e-09
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		1e-09
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		1e-09
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		2e-09
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		2e-09
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		3e-09
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		3e-09
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		3e-09
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		3e-09
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		3e-09
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-09
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		3e-09
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		3e-09
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		3e-09
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		4e-09
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		5e-09
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		5e-09
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		6e-09
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		7e-09
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		8e-09
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		9e-09
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-08
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		2e-08
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		3e-08
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-08
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		7e-08
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		7e-08
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		8e-08
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-07
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		1e-07
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-07
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-07
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-07
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		1e-07
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		2e-07
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		2e-07
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		2e-07
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		3e-07
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		3e-07
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		3e-07
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		3e-07
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		3e-07
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		6e-07
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		6e-07
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		8e-07
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		8e-07
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		1e-06
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		1e-06
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		1e-06
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		2e-06
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		2e-06
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		2e-06
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		3e-06
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		5e-06
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		6e-06
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		1e-05
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		1e-05
4h15_A	261	Crystal Structure Of A Short Chain Alcohol Dehydrog		2e-05
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		2e-05
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		3e-05
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		3e-05
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		4e-05
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		5e-05
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		5e-05
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		7e-05
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		2e-04
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		2e-04
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		4e-04
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		4e-04
3oif_A	266	Crystal Structure Of Enoyl-Acp Reductases I (Fabi)		5e-04
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		6e-04
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		7e-04
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		7e-04
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		8e-04

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score =  193 bits (490), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 120/261 (45%), Positives = 159/261 (60%), Gaps = 23/261 (8%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           RLQ KVA+ITGGA GIGE TA+LF ++GAKV+IADI DD G+ VC +I           +
Sbjct: 13  RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVIS----F 68
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           VHCDVTK++D+ N V+T + ++GKLDIMF N G +     +IL+    +F+R++ IN+ G
Sbjct: 69  VHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYG 128
Query: 129 AFL-----GRNMLLGVCGII-----------GGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           AFL      R M+    G I           G   +H YT++KH +LGL  +   ELG +
Sbjct: 129 AFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEY 188
Query: 173 GIRVNCVSPYAVSTPLAKDFLKLAD---DGLGGMYSNLKGAVLEPEDAAEAALYLGSDES 229
           GIRVNCVSPY V++PL  D   +     + L    +NLKG +L  ED A+A  YL  DES
Sbjct: 189 GIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDES 248
Query: 230 KCVSGHNLVVDGGFAIVNAGF 250
           K VSG NLV+DGG+   N  F
Sbjct: 249 KYVSGLNLVIDGGYTRTNPAF 269

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  144 bits (363), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 134/252 (53%), Gaps = 30/252 (11%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
           M  RL GKVAL++GGARG+G    R     GAKV+  DI D+ G+++             
Sbjct: 1   MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAA------ELADA 54
Query: 66  XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             YVH DVT+    + AV+TAVT +G L ++ NNAG ++     I D    E++RIL +N
Sbjct: 55  ARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN--IGTIEDYALTEWQRILDVN 112
Query: 126 LVGAFLG------------RNMLLGVC---GIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           L G FLG            R  ++ +    G+ G  A H YT++K  + GL K+TA+ELG
Sbjct: 113 LTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG 172
Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
             GIRVN + P  V TP+  D++   +D    ++    G   EP + +   +YL SDES 
Sbjct: 173 PSGIRVNSIHPGLVKTPM-TDWVP--ED----IFQTALGRAAEPVEVSNLVVYLASDESS 225
Query: 231 CVSGHNLVVDGG 242
             +G   VVDGG
Sbjct: 226 YSTGAEFVVDGG 237

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  141 bits (356), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 131/252 (51%), Gaps = 30/252 (11%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
           M  RL GKVAL++GGARG G    R     GAKV+  DI D+ G++              
Sbjct: 1   MSGRLTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAA------ELADA 54
Query: 66  XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             YVH DVT+    + AV+TAVT +G L ++ NNAG ++     I D    E++RIL +N
Sbjct: 55  ARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN--IGTIEDYALTEWQRILDVN 112
Query: 126 LVGAFLG------------RNMLLGVC---GIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           L G FLG            R  ++ +    G+ G  A H YT++K  + GL K+TA+ELG
Sbjct: 113 LTGVFLGIRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG 172
Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
             GIRVN + P  V TP   D++   +D    ++    G   EP + +   +YL SDES 
Sbjct: 173 PSGIRVNSIHPGLVKTP-XTDWVP--ED----IFQTALGRAAEPVEVSNLVVYLASDESS 225
Query: 231 CVSGHNLVVDGG 242
             +G   VVDGG
Sbjct: 226 YSTGAEFVVDGG 237

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 129/256 (50%), Gaps = 21/256 (8%)
Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
           + L+ KV ++TG   GIG   A+ F+ + + V+  ++ +D    + +++           
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLG-- 60
Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
            V  DV+K+KD+E  V      Y ++D++ NNAG +D V P    +D+  +ER+L++NL 
Sbjct: 61  -VKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDEL-WERVLAVNLY 118
Query: 128 GAFLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            AF     ++                + GI GG A   YT +KHGL+GL ++ A   G  
Sbjct: 119 SAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQ 178
Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYS--NLKGAVLEPEDAAEAALYLGSDESK 230
           GIR   V P  V T +     K ++ G+  +    +L   + EPED A   ++L SDE+ 
Sbjct: 179 GIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEAS 238
Query: 231 CVSGHNLVVDGGFAIV 246
            V+G  +VVDGG  ++
Sbjct: 239 FVNGDAVVVDGGLTVL 254

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 126/263 (47%), Gaps = 39/263 (14%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           R   +V LITGG  G+G  TA   +  GAK+ + D+  + G    K              
Sbjct: 10  RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSE-GLEASKAAVLETAPDAEVLT 68
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLV 127
              DV+ E  +E  V     ++G++D  FNNAG   E K N  ++   AEF++++SINL 
Sbjct: 69  TVADVSDEAQVEAYVTATTERFGRIDGFFNNAGI--EGKQNPTESFTAAEFDKVVSINLR 126
Query: 128 GAFLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           G FLG   +L                V GI G      Y ++KHG++GL +N+AVE GR+
Sbjct: 127 GVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRY 186
Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE-------------PEDAAE 219
           GIR+N ++P A+ TP+ ++ +K  D        N + A  E             PE AA 
Sbjct: 187 GIRINAIAPGAIWTPMVENSMKQLDP------ENPRKAAEEFIQVNPSKRYGEAPEIAAV 240
Query: 220 AALYLGSDESKCVSGHNLVVDGG 242
            A  L SD++  V+   + +DGG
Sbjct: 241 VAFLL-SDDASYVNATVVPIDGG 262

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score =  117 bits (292), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 33/260 (12%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L  +V ++TGG  GIG  TA LF+K+GA V++AD+ +D    V  +I            V
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFG------V 78
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             DV+  KD E+ V     ++G++D++ NNAG       N++   +  ++RI S+N+ G 
Sbjct: 79  RVDVSSAKDAESXVEKTTAKWGRVDVLVNNAGF--GTTGNVVTIPEETWDRIXSVNVKGI 136
Query: 130 FLGRNMLLGVCGIIGG---------------AATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           FL    ++ V    GG               A   AY +SK  +  L +  A +  + GI
Sbjct: 137 FLCSKYVIPVXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGI 196
Query: 175 RVNCVSPYAVSTPL-------AKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD 227
           RVN V+P  + +P        AKD  KL  D       +  G     E+ AEA L+L SD
Sbjct: 197 RVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVXDRXGTA---EEIAEAXLFLASD 253
Query: 228 ESKCVSGHNLVVDGGFAIVN 247
            S+  +G  L VDGG +I N
Sbjct: 254 RSRFATGSILTVDGGSSIGN 273

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 129/252 (51%), Gaps = 31/252 (12%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L GK  +ITGGARG+G   AR     GA+V++AD+ D+ G +  +++           Y 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL------GDAARYQ 56
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-FERILSINLVG 128
           H DVT E+D +  V  A  ++G +D + NNAG    +    L+ +  E F +++ INL G
Sbjct: 57  HLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM---FLETESVERFRKVVEINLTG 113
Query: 129 AFLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F+G   ++                  G++G A T +Y +SK G+ GL K  AVELG   
Sbjct: 114 VFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDR 173
Query: 174 IRVNCVSPYAVSTPL-AKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKC 231
           IRVN V P    TP+ A+  ++  +    G Y N   G V EP + A A + L SD S  
Sbjct: 174 IRVNSVHPGMTYTPMTAETGIRQGE----GNYPNTPMGRVGEPGEIAGAVVKLLSDTSSY 229
Query: 232 VSGHNLVVDGGF 243
           V+G  L VDGG+
Sbjct: 230 VTGAELAVDGGW 241

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score =  113 bits (283), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 121/253 (47%), Gaps = 25/253 (9%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           RL GKVA+ITGG  GIG   A  F + GAKV+I D   D+GE   K +           +
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSV----GTPDQIQF 58
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              D + E       +     +G +  + NNAG    V  ++ +   AE+ ++L++NL G
Sbjct: 59  FQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIA--VNKSVEETTTAEWRKLLAVNLDG 116
Query: 129 AFLG--------RNMLLG--------VCGIIGGAATHAYTSSKHGLLGLMKNTAVE--LG 170
            F G        +N  LG        + G +G  +  AY +SK  +  + K+ A++  L 
Sbjct: 117 VFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALK 176
Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
            + +RVN V P  + TPL  D L  A++ +        G + EP D A   +YL S+ESK
Sbjct: 177 DYDVRVNTVHPGYIKTPLVDD-LPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESK 235
Query: 231 CVSGHNLVVDGGF 243
             +G   VVDGG+
Sbjct: 236 FATGSEFVVDGGY 248

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 132/261 (50%), Gaps = 30/261 (11%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIXXXXXXXX 64
           M + L+GKV +ITG + G+G+  A  F+   AKV++    K+D   SV ++I        
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
               V  DVT E D+ N V +A+ ++GKLD+M NNAG  + V  +  +   +++ +++  
Sbjct: 61  A---VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSH--EMSLSDWNKVIDT 115
Query: 125 NLVGAFLG---------RNMLLGVCGIIGGAATHA---------YTSSKHGLLGLMKNTA 166
           NL GAFLG          N + G   +I  ++ H          Y +SK G+  + K  A
Sbjct: 116 NLTGAFLGSREAIKYFVENDIKGT--VINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLA 173
Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDAAEAALYL 224
           +E    GIRVN + P A++TP+  +  K AD        ++   G + EPE+ A  A +L
Sbjct: 174 LEYAPKGIRVNNIGPGAINTPINAE--KFADPEQRADVESMIPMGYIGEPEEIAAVAAWL 231
Query: 225 GSDESKCVSGHNLVVDGGFAI 245
            S E+  V+G  L  DGG  +
Sbjct: 232 ASSEASYVTGITLFADGGMTL 252

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 128/253 (50%), Gaps = 32/253 (12%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L GK  +ITGGARG+G   AR     GA+V++AD+ D+ G +  +++           Y 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL------GDAARYQ 56
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-FERILSINLVG 128
           H DVT E+D +  V  A  ++G +D + NNAG    +    L+ +  E F +++ INL G
Sbjct: 57  HLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM---FLETESVERFRKVVEINLTG 113
Query: 129 AFLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F+G   ++                  G++G A T +Y +SK G+ GL K  AVELG   
Sbjct: 114 VFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDR 173
Query: 174 IRVNCVSPYAVSTPL-AKDFLKLADDGLGGMYSNLKGAVL--EPEDAAEAALYLGSDESK 230
           IRVN V P    TP+ A+  ++  +    G Y N     +  EP + A A + L SD S 
Sbjct: 174 IRVNSVHPGMTYTPMTAETGIRQGE----GNYPNTPMGRVGNEPGEIAGAVVKLLSDTSS 229
Query: 231 CVSGHNLVVDGGF 243
            V+G  L VDGG+
Sbjct: 230 YVTGAELAVDGGW 242

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 131/259 (50%), Gaps = 30/259 (11%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIXXXXXXXX 64
           M + L+GKV +ITG + G+G+  A  F+   AKV++    K+D   SV ++I        
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
               V  DVT E D+ N V +A+ ++GKLD+M NNAG  + V  +  +   +++ +++  
Sbjct: 61  A---VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSH--EMSLSDWNKVIDT 115
Query: 125 NLVGAFLG---------RNMLLGVCGIIGGAATHA---------YTSSKHGLLGLMKNTA 166
           NL GAFLG          N + G   +I  ++ H          Y +SK G+  + +  A
Sbjct: 116 NLTGAFLGSREAIKYFVENDIKGT--VINMSSVHEKIPWPLFVHYAASKGGMKLMTETLA 173
Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDAAEAALYL 224
           +E    GIRVN + P A++TP+  +  K AD        ++   G + EPE+ A  A +L
Sbjct: 174 LEYAPKGIRVNNIGPGAINTPINAE--KFADPEQRADVESMIPMGYIGEPEEIAAVAAWL 231
Query: 225 GSDESKCVSGHNLVVDGGF 243
            S E+  V+G  L  DGG 
Sbjct: 232 ASSEASYVTGITLFADGGM 250

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score =  110 bits (276), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 132/261 (50%), Gaps = 30/261 (11%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIXXXXXXXX 64
           M + L+GKV +ITG + G+G+  A  F+   AKV++    K+D   SV ++I        
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
               V  DVT E D+ N V +A+ ++GKLD+M NNAG  + V  +  +   +++ +++  
Sbjct: 61  A---VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSH--EMSLSDWNKVIDT 115
Query: 125 NLVGAFLG---------RNMLLGVCGIIGGAATHA---------YTSSKHGLLGLMKNTA 166
           NL GAFLG          N + G   +I  ++ H          Y +SK G+  + +  A
Sbjct: 116 NLTGAFLGSREAIKYFVENDIKGT--VINMSSVHEKIPWPLFVHYAASKGGMKLMTETLA 173
Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDAAEAALYL 224
           +E    GIRVN + P A++TP+  +  K AD        ++   G + EPE+ A  A +L
Sbjct: 174 LEYAPKGIRVNNIGPGAINTPINAE--KFADPEQRADVESMIPMGYIGEPEEIAAVAAWL 231
Query: 225 GSDESKCVSGHNLVVDGGFAI 245
            S E+  V+G  L  DGG  +
Sbjct: 232 ASSEASYVTGITLFADGGMTL 252

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score =  110 bits (275), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 123/267 (46%), Gaps = 22/267 (8%)
Query: 5   LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXX 64
           +++ RL+GK+A++TG + GIG   A LF++ GAKV++       G ++ +          
Sbjct: 1   MVMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARN---GNALAELTDEIAGGGG 57
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
               +  DV  E   E  V  AV ++G LD  FNNAG +  +   I       +   L  
Sbjct: 58  EAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMG-EISSLSVEGWRETLDT 116
Query: 125 NLVGAFLGRNMLLGVCGIIGG----------------AATHAYTSSKHGLLGLMKNTAVE 168
           NL  AFL     +     +GG                A    Y +SK GL+GL++  AVE
Sbjct: 117 NLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVE 176
Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKG--AVLEPEDAAEAALYLGS 226
           LG  GIRVN + P    TP     L  A     G    L     +  PE+ AEAALYL S
Sbjct: 177 LGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLAS 236
Query: 227 DESKCVSGHNLVVDGGFAIVNAGFSVF 253
           D +  V+G  L+ DGG ++  A  +++
Sbjct: 237 DGASFVTGAALLADGGASVTKAAENLY 263

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score =  110 bits (275), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 120/253 (47%), Gaps = 25/253 (9%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           RL GKVA+ITGG  GIG   A  F + GAKV+I     D+GE   K +           +
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV----GTPDQIQF 58
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              D + E       +     +G +  + NNAG    V  ++ +   AE+ ++L++NL G
Sbjct: 59  FQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIA--VNKSVEETTTAEWRKLLAVNLDG 116
Query: 129 AFLG--------RNMLLG--------VCGIIGGAATHAYTSSKHGLLGLMKNTAVE--LG 170
            F G        +N  LG        + G +G  +  AY +SK  +  + K+ A++  L 
Sbjct: 117 VFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALK 176
Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
            + +RVN V P  + TPL  D L  A++ +        G + EP D A   +YL S+ESK
Sbjct: 177 DYDVRVNTVHPGYIKTPLVDD-LPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESK 235
Query: 231 CVSGHNLVVDGGF 243
             +G   VVDGG+
Sbjct: 236 FATGSEFVVDGGY 248

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 131/259 (50%), Gaps = 30/259 (11%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIXXXXXXXX 64
           M + L+GKV +ITG + G+G+  A  F+   AKV++    K+D   SV ++I        
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
               V  DVT E D+ N V +A+ ++GKLD+M NNAG  + V  +  +   +++ +++  
Sbjct: 61  A---VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSH--EMSLSDWNKVIDT 115
Query: 125 NLVGAFLG---------RNMLLGVCGIIGGAATHA---------YTSSKHGLLGLMKNTA 166
           NL GAFLG          N + G   +I  ++ H          Y +SK G+  + +  A
Sbjct: 116 NLTGAFLGSREAIKYFVENDIKGT--VINMSSVHEKIPWPLFVHYAASKGGMKLMTETLA 173
Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDAAEAALYL 224
           +E    GIRVN + P A++TP+  +  K AD        ++   G + EPE+ A  A +L
Sbjct: 174 LEYAPKGIRVNNIGPGAINTPINAE--KFADPEQRADVESMIPMGYIGEPEEIAAVAAWL 231
Query: 225 GSDESKCVSGHNLVVDGGF 243
            S E+  V+G  L  DGG 
Sbjct: 232 ASSEASYVTGITLFADGGM 250

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 122/256 (47%), Gaps = 24/256 (9%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
           M   L+ KV +ITGG+ G+G   A  F +  AKV+I    ++  E               
Sbjct: 9   MYTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNE--EEALDAKKEVEEAGGQ 66
Query: 66  XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              V  DVTKE+D+ N V TA+ ++G LD+M NNAG  + V  + L  D   + +++  N
Sbjct: 67  AIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDN--WNKVIDTN 124
Query: 126 LVGAFLGRNMLLGVC-------GIIGGAATHA---------YTSSKHGLLGLMKNTAVEL 169
           L GAFLG    +           +I  ++ H          Y +SK G+  + +  A+E 
Sbjct: 125 LTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEY 184
Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDAAEAALYLGSD 227
              GIRVN + P A++TP+  +  K AD        ++   G + +PE+ A  A +L S 
Sbjct: 185 APKGIRVNNIGPGAMNTPINAE--KFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASS 242
Query: 228 ESKCVSGHNLVVDGGF 243
           ++  V+G  L  DGG 
Sbjct: 243 QASYVTGITLFADGGM 258

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 122/256 (47%), Gaps = 24/256 (9%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
           M   L+ KV +ITGG+ G+G   A  F +  AKV+I    ++  E               
Sbjct: 9   MYTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNE--EEALDAKKEVEEAGGQ 66
Query: 66  XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              V  DVTKE+D+ N V TA+ ++G LD+M NNAG  + V  + L  D   + +++  N
Sbjct: 67  AIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDN--WNKVIDTN 124
Query: 126 LVGAFLGRNMLLGVC-------GIIGGAATHA---------YTSSKHGLLGLMKNTAVEL 169
           L GAFLG    +           +I  ++ H          Y +SK G+  + +  A+E 
Sbjct: 125 LTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEY 184
Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDAAEAALYLGSD 227
              GIRVN + P A++TP+  +  K AD        ++   G + +PE+ A  A +L S 
Sbjct: 185 APKGIRVNNIGPGAMNTPINAE--KFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASS 242
Query: 228 ESKCVSGHNLVVDGGF 243
           ++  V+G  L  DGG 
Sbjct: 243 QASYVTGITLFADGGM 258

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 122/256 (47%), Gaps = 24/256 (9%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
           M   L+ KV +ITGG+ G+G   A  F +  AKV+I    ++  E               
Sbjct: 9   MYTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNE--EEALDAKKEVEEAGGQ 66
Query: 66  XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              V  DVTKE+D+ N V TA+ ++G LD+M NNAG  + V  + L  D   + +++  N
Sbjct: 67  AIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDN--WNKVIDTN 124
Query: 126 LVGAFLGRNMLLGVC-------GIIGGAATHA---------YTSSKHGLLGLMKNTAVEL 169
           L GAFLG    +           +I  ++ H          Y +SK G+  + +  A+E 
Sbjct: 125 LTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEY 184
Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDAAEAALYLGSD 227
              GIRVN + P A++TP+  +  K AD        ++   G + +PE+ A  A +L S 
Sbjct: 185 APKGIRVNNIGPGAMNTPINAE--KFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASS 242
Query: 228 ESKCVSGHNLVVDGGF 243
           ++  V+G  L  DGG 
Sbjct: 243 QASYVTGITLFADGGM 258

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score =  103 bits (257), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 119/255 (46%), Gaps = 26/255 (10%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+GK+AL+TG + GIG   A  ++K GA ++  DI  +L   V + +             
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQEL---VDRGMAAYKAAGINAHGY 88
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
            CDVT E  I+  V    ++ G +DI+ NNAG +  V   +++   A+F +++ I+L   
Sbjct: 89  VCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVP--MIEMTAAQFRQVIDIDLNAP 146
Query: 130 FL------------GRNMLLGVCGI---IGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F+            G   ++ +C +   +G     AY ++K GL  L KN A E G   I
Sbjct: 147 FIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANI 206
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL------EPEDAAEAALYLGSDE 228
           + N + P  ++TP      +L  DG    +     A        E ED    A++L SD 
Sbjct: 207 QCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAARWGEAEDLMGPAVFLASDA 266
Query: 229 SKCVSGHNLVVDGGF 243
           S  V+GH L VDGG 
Sbjct: 267 SNFVNGHILYVDGGI 281

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 134/257 (52%), Gaps = 28/257 (10%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+GKVALITG   G GE  A+ F+K GAKV+I D      E V  +I            V
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALA------V 60
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             D++KE D++ AV  A++++GK+DI+ NNAG +     N    +  EF+RI+ +N+ G 
Sbjct: 61  AADISKEADVDAAVEAALSKFGKVDILVNNAG-IGHKPQNAELVEPEEFDRIVGVNVRGV 119
Query: 130 FLGRNMLLG----------VCGIIGGAATHA---------YTSSKHGLLGLMKNTAVELG 170
           +L  + L+            C I+  A+T A         Y ++K  ++ + K  A+EL 
Sbjct: 120 YLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELA 179
Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY--SNLKGAVLEPEDAAEAALYLGSDE 228
              IRV  ++P A  TPL   F+    + +   +  S   G +L+P+D AEAA +L S +
Sbjct: 180 PAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQ 239
Query: 229 SKCVSGHNLVVDGGFAI 245
           +  ++G  L VDGG +I
Sbjct: 240 ASMITGVALDVDGGRSI 256

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 121/254 (47%), Gaps = 27/254 (10%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+GKVAL+TG +RGIG   A   +K GA V++    ++  +   + +            V
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNE--QKANEVVDEIKKLGSDAIAV 59
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVG 128
             DV   +D+ N V   V  +G++DI+ NNAG     K N+L    + E++ +++ NL G
Sbjct: 60  RADVANAEDVTNMVKQTVDVFGQVDILVNNAGV---TKDNLLMRMKEEEWDTVINTNLKG 116
Query: 129 AFL-----GRNML----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            FL      R M+            V G+ G      Y ++K G++GL K +A EL    
Sbjct: 117 VFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRN 176
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL--EPEDAAEAALYLGSDESKC 231
           I VN ++P  ++T    D   + D+ +      L  A    E +D A A  +  SD+SK 
Sbjct: 177 ITVNAIAPGFIAT----DMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKY 232
Query: 232 VSGHNLVVDGGFAI 245
           ++G  L VDGG  +
Sbjct: 233 ITGQTLNVDGGMVM 246

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 128/274 (46%), Gaps = 40/274 (14%)
Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI---KDDL------GESVCKDIX 57
           + RLQGKVA ITG ARG G   A   ++ GA ++  D+   + +L       E + + + 
Sbjct: 41  MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVR 100
Query: 58  XXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE 117
                         DV     ++  V+ A+ ++G +DI+ +N G  ++ +   L + Q  
Sbjct: 101 LVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQ-- 158
Query: 118 FERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAYTSSKHGLLGL 161
           +  IL  NL+GA+     +L                   G+ G      Y +SKHG+ GL
Sbjct: 159 WSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGL 218
Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLA--KDFLKL--------ADDGLGGMYSN---LK 208
           M + A E+GR  IRVN V+P AV+T +A  +  LK+          +    ++S    L 
Sbjct: 219 MLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP 278
Query: 209 GAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG 242
              +EPED + A  +L SDE++ + G  + VDGG
Sbjct: 279 IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 128/264 (48%), Gaps = 33/264 (12%)
Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHC 71
           GK  L+TGGARGIG   A+ F++ GA V + D++ + G+ V + I           +   
Sbjct: 6   GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAI--------GGAFFQV 56
Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL----- 126
           D+  E++    V  A    G++D++ NNA        + L     E+ R+L +NL     
Sbjct: 57  DLEDERERVRFVEEAAYALGRVDVLVNNAAIA--APGSALTVRLPEWRRVLEVNLTAPMH 114
Query: 127 VGAFLGRNM----------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV 176
           + A   R M          +  V G+       AY +SK GL+ L ++ A++L    IRV
Sbjct: 115 LSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRV 174
Query: 177 NCVSPYAVSTPLAKDFLKLADDGLGGM--YSNLKG--AVLEPEDAAEAALYLGSDESKCV 232
           N V+P A++T    + + L+ D       + +L     + +PE+ AEA L+L S+++  +
Sbjct: 175 NAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFI 234
Query: 233 SGHNLVVDGGFAIVNAGFSVFGKS 256
           +G  L VDGG   + A F + G+ 
Sbjct: 235 TGAILPVDGG---MTASFMMAGRP 255

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 118/250 (47%), Gaps = 22/250 (8%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           RL GK  L+TG A GIG     LF++ GA ++  D ++ L       +            
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVV---- 58
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              DV+  K +E     A+ ++G+L  + + AG         L  +   +E++L +NL G
Sbjct: 59  --ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEA--WEKVLRVNLTG 114
Query: 129 AFL------------GRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV 176
           +FL            G  +L G    +G      Y + K G++GL +  A+EL R G+RV
Sbjct: 115 SFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRV 174
Query: 177 NCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHN 236
           N + P  + TP+       A +   G  ++  G    PE+ A+AAL+L S+ES  ++G  
Sbjct: 175 NVLLPGLIQTPMTAGLPPWAWEQEVG--ASPLGRAGRPEEVAQAALFLLSEESAYITGQA 232
Query: 237 LVVDGGFAIV 246
           L VDGG +IV
Sbjct: 233 LYVDGGRSIV 242

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 126/280 (45%), Gaps = 49/280 (17%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-------------KDDLGESV 52
           M  +++GKVA ITG ARG G   A   ++ GA ++  D+              DDL E+V
Sbjct: 22  MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETV 81
Query: 53  CKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDE-VKPNIL 111
            +                 DV     ++ AV+  VTQ G+LDI+  NA    E  + N +
Sbjct: 82  RQ----VEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRM 137
Query: 112 DNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAYTSSK 155
           D     +  ++ +NL GA++   + +                 + G+ G      Y +SK
Sbjct: 138 D--PKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASK 195
Query: 156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPL---AKDFLKLADDGLGGMYSNLKGA-- 210
           HGL GLM+  A+ELG   IRVN V P +V+TP+      +     D       + + A  
Sbjct: 196 HGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASR 255
Query: 211 --------VLEPEDAAEAALYLGSDESKCVSGHNLVVDGG 242
                    +EP D + A L+L SD+++ ++G +L VDGG
Sbjct: 256 QMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 97.1 bits (240), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 130/289 (44%), Gaps = 65/289 (22%)
Query: 5   LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-------------KDDLGES 51
           +M  R+ GKVA I+G ARG G   A   ++ GA ++  DI              +DL E+
Sbjct: 8   VMTGRVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAET 67
Query: 52  --VCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKP- 108
             + KD+               DV   + +++AV++ V Q G+LDI+  NAG   + +  
Sbjct: 68  ADLVKDLDRRIVTA------QVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKL 121
Query: 109 -NILDNDQAEFERILSINLVGAFL------------GRNMLLGVCGIIGGAATHA----Y 151
             I DN    ++ ++ INL G +             GR   + +   +GG   +     Y
Sbjct: 122 HKIRDN---VWQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHY 178
Query: 152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVST------------------PLAKDFL 193
            ++KHG++GLM+  AVELG   IRVN V P  VST                  P   DF 
Sbjct: 179 IAAKHGVIGLMRAFAVELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFA 238
Query: 194 KLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG 242
            ++      M   L    ++  D + A L+L SDES+ V+G +L VD G
Sbjct: 239 PISQ-----MMHTLPVPWVDASDISNAVLFLASDESRYVTGVSLPVDAG 282

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 114/232 (49%), Gaps = 29/232 (12%)
Query: 30  RLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQ 89
           R F   GA+V+I D  +  G ++ +++           ++ CDVT+E D++  V+  + +
Sbjct: 27  RAFVNSGARVVICDKDESGGRALEQELPGAV-------FILCDVTQEDDVKTLVSETIRR 79
Query: 90  YGKLDIMFNNAGTVDEVKPNILDNDQAE-FERILSINLVGAFLGRNMLL----------- 137
           +G+LD + NNAG      P   +   A+ F ++L +NL+G +    + L           
Sbjct: 80  FGRLDCVVNNAG--HHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVI 137
Query: 138 ---GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLK 194
               + G IG A    Y ++K  +  + K  A++   +G+RVNC+SP  + TPL ++   
Sbjct: 138 NISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAA 197
Query: 195 LADDGLG----GMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG 242
           L  D       GM +   G + +P +   AA++L S+ + C +G  L+V GG
Sbjct: 198 LMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASEANFC-TGIELLVTGG 248

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 125/295 (42%), Gaps = 75/295 (25%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
           M  R++GKVA +TG ARG G   A   ++ GA ++  DI        CK I         
Sbjct: 5   MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDI--------CKPIRAGVVDTAI 56
Query: 66  XXYVHCD---------------VTKEKDIEN------AVNTAVTQYGKLDIMFNNAG--- 101
                 D               VT E D+ +      AV++ V Q G+LDI+  NAG   
Sbjct: 57  PASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGN 116
Query: 102 ---TVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGG------------- 145
              T+D+         + ++  ++ INL G +  + +  GV  +I G             
Sbjct: 117 GGDTLDKTS-------EEDWTEMIDINLAGVW--KTVKAGVPHMIAGGRGGSIILTSSVG 167
Query: 146 ---AATHA--YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPL----------AK 190
              A  H   Y ++KHG++GLM+   VELG+  IRVN V P  V TP+            
Sbjct: 168 GLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRP 227
Query: 191 DFLKLADDGLGG---MYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG 242
           D      D +     M+  L    +EP D + A L+  SDE++ ++G  L +D G
Sbjct: 228 DLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG 282

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 121/263 (46%), Gaps = 48/263 (18%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVL----------IADIKDDLGESVCKDIXXX 59
           L GKVA++TG   GIG   AR  +  G  VL           A  K   G + C+     
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACR----- 81
Query: 60  XXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFE 119
                       DV+ E+ I   V+  V  +G +D +  NAG V     +++D    +F+
Sbjct: 82  -----------VDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVH--LASLIDTTVEDFD 128
Query: 120 RILSINLVGAFL------------GRNMLLGVCGIIGGAA---THAYTSSKHGLLGLMKN 164
           R+++INL GA+L            G   ++ +  + G  A   T AY  SK G++ L + 
Sbjct: 129 RVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRI 188
Query: 165 TAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGG-----MYSNLKGAVLEPEDAAE 219
           TA EL   GIR N + P  V TP+ +  + + D  LG      M + L+G +  PE+ A 
Sbjct: 189 TAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAG 248
Query: 220 AALYLGSDESKCVSGHNLVVDGG 242
             ++L SD++  ++G   + DGG
Sbjct: 249 IVVFLLSDDASMITGTTQIADGG 271

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 117/253 (46%), Gaps = 30/253 (11%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           RL+ K  LITG A GIG  T  LF+K GA+++  DI++       + +            
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP-------- 53
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLV 127
           V  DV     +E     A+   G+LD + + AG T D         D   +E +L +NL 
Sbjct: 54  VVXDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKXPLED---WELVLRVNLT 110
Query: 128 GAFL--------------GRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
           G+FL              G  +L      +G      Y +S  G++GL +  A+ELGR+G
Sbjct: 111 GSFLVAKAASEAXREKNPGSIVLTASRVYLGNLGQANYAASXAGVVGLTRTLALELGRWG 170
Query: 174 IRVNCVSPYAVST-PLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV 232
           IRVN ++P  + T   AK   K+ +  +        G   +P + A AAL+L SDES  +
Sbjct: 171 IRVNTLAPGFIETRXTAKVPEKVREKAIAATPLGRAG---KPLEVAYAALFLLSDESSFI 227
Query: 233 SGHNLVVDGGFAI 245
           +G  L VDGG  I
Sbjct: 228 TGQVLFVDGGRTI 240

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 121/254 (47%), Gaps = 29/254 (11%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+GKVAL+TG +RGIG+  A L ++ GAKV I     + G     D             +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKG-----M 63
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVG 128
             +VT  + IE  +     ++G +DI+ NNAG T D +   ++   + E+  I+  NL  
Sbjct: 64  ALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL---LMRMKEEEWSDIMETNLTS 120
Query: 129 AF-LGRNMLLG--------------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F L + +L G              V G +G A    Y ++K G++G  K+ A E+   G
Sbjct: 121 IFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRG 180
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKCV 232
           + VN V+P A+ T + K    L D+      + +    L +P + A A  +L S E+  +
Sbjct: 181 VTVNTVAPGAIETDMTK---ALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYI 237
Query: 233 SGHNLVVDGGFAIV 246
           +G  L V+GG  ++
Sbjct: 238 TGETLHVNGGMYMI 251

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 31/257 (12%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           +L+GK A++TG +RG+G+  A      GA +++    +    S   D             
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVL----NGSPASTSLDATAEEFKAAGINV 57
Query: 69  VHC--DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
           V    DV   +D+EN V TA+  +G++DI+ NNAG   +    +L   + +++ +L+ NL
Sbjct: 58  VVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTL--MLKMSEKDWDDVLNTNL 115
Query: 127 VGAFL-----GRNML----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
             A+L      + ML            + GIIG A    Y +SK GL+G  K+ A E   
Sbjct: 116 KSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAA 175
Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSN---LKGAVLEPEDAAEAALYLGSDE 228
            GI  N V+P  + T    D   +  D +  MY N   LK     PE+ A    +L SD+
Sbjct: 176 KGIYCNAVAPGIIKT----DMTDVLPDKVKEMYLNNIPLK-RFGTPEEVANVVGFLASDD 230
Query: 229 SKCVSGHNLVVDGGFAI 245
           S  ++G  + +DGG  +
Sbjct: 231 SNYITGQVINIDGGLVM 247

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 29/258 (11%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           RL  +VA++TGGA+ IG       ++ GA+V+IAD+ + +     +D+            
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSS--- 66
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGT-VDEVKPNILDNDQAEFERILSINLV 127
           V  DVT  + ++NAV +   Q G++DI+   AG  + EVK    D    ++ + + INL 
Sbjct: 67  VVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAE--DMTDGQWLKQVDINLN 124
Query: 128 GAF-----LGRNML---LGVCGIIGGAA---------THAYTSSKHGLLGLMKNTAVELG 170
           G F     +GR ML    GV   IG  +           AY +SK G+   +++ A E  
Sbjct: 125 GMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWA 184
Query: 171 RFGIRVNCVSPYAVSTPLAK---DFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD 227
             GIR N V+P  + T L +   +  +L D  + G      G V +P++ A    +L SD
Sbjct: 185 PHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAG---TPMGRVGQPDEVASVVQFLASD 241
Query: 228 ESKCVSGHNLVVDGGFAI 245
            +  ++G  + VD GF +
Sbjct: 242 AASLMTGAIVNVDAGFTV 259

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 93.6 bits (231), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 114/277 (41%), Gaps = 48/277 (17%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
           M  +L+G+VA ITG ARG G   A   +  GA ++  DI   L   V  D          
Sbjct: 5   MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSET 64
Query: 66  XXYVHC----------DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQ 115
              V            D      +   V+  V   G+LDI+  NAG      P   D+  
Sbjct: 65  VRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVA---APQAWDDIT 121
Query: 116 AE-FERILSINLVGAFLGRNMLLGVCGIIGGAATHA------------------YTSSKH 156
            E F  ++ IN+ G +    ++ G   II G    +                  YT+SKH
Sbjct: 122 PEDFRDVMDINVTGTW--NTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKH 179
Query: 157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG-GMYSN--------- 206
            + GL +  A ELG+  IRVN V P  V+TP+    +  A   +G  M +N         
Sbjct: 180 AVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTA---VGQAMETNPQLSHVLTP 236
Query: 207 -LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG 242
            L   V EPED A+   +L SDES+ V+   + VD G
Sbjct: 237 FLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQG 273

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 121/260 (46%), Gaps = 38/260 (14%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIAD-IKDDLGESVCKDIXXXXXXXX 64
           M +RL+ K+A+ITGGA GIG   A  F+  GA + IAD +     E+  +++        
Sbjct: 1   MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLT-- 58
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
               V CDV++  D+E      ++ +G+ DI+ NNAG    +  + L  +Q  +++   I
Sbjct: 59  ----VKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQ--WKKTFEI 112
Query: 125 NLVGAFL--------------GR--NMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
           N+   FL              GR  N+      +   A TH Y S+K   +G  +  A +
Sbjct: 113 NVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTH-YISTKAANIGFTRALASD 171
Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY---SNLKGAVLE---PEDAAEAAL 222
           LG+ GI VN ++P  V T   +         L  M+    N+  A+     P D   AA 
Sbjct: 172 LGKDGITVNAIAPSLVRTATTE------ASALSAMFDVLPNMLQAIPRLQVPLDLTGAAA 225
Query: 223 YLGSDESKCVSGHNLVVDGG 242
           +L SD++  ++G  L VDGG
Sbjct: 226 FLASDDASFITGQTLAVDGG 245

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 29/254 (11%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+GKVAL+TG +RGIG+  A L ++ GAKV I     + G     D             +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKG-----M 63
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVG 128
             +VT  + IE  +     ++G +DI+ NNAG T D +   ++   + E+  I+  NL  
Sbjct: 64  ALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL---LMRMKEEEWSDIMETNLTS 120
Query: 129 AF-LGRNMLLG--------------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F L + +L G              V G +G A    Y ++K G++G  K+ A E+   G
Sbjct: 121 IFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRG 180
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKCV 232
           + VN V+P  + T + K    L D+      + +    L +P + A A  +L S E+  +
Sbjct: 181 VTVNTVAPGFIETDMTK---ALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYI 237
Query: 233 SGHNLVVDGGFAIV 246
           +G  L V+GG  ++
Sbjct: 238 TGETLHVNGGMYMI 251

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 33/258 (12%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L G+ A++TGG++GIG   AR   K GA V IAD+     ++V   +            V
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFA------V 63
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             DVTK   ++ A+  A+   G  D++  NAG V  ++P +   D+ E++    +N  G 
Sbjct: 64  EVDVTKRASVDAAMQKAIDALGGFDLLCANAG-VSTMRPAVDITDE-EWDFNFDVNARGV 121
Query: 130 FLG-----RNMLLG-VCGIIGGAATHA----------YTSSKHGLLGLMKNTAVELGRFG 173
           FL      R+ L     G+I   A+ A          Y++SK  + G  +  A E+    
Sbjct: 122 FLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKN 181
Query: 174 IRVNCVSPYAVSTPLAK-------DFLKLADDGLGGMYSNLK--GAVLEPEDAAEAALYL 224
           IRVNCV P  V T + +       +   +  + +   Y +L   G + EPED A+  ++L
Sbjct: 182 IRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFL 241
Query: 225 GSDESKCVSGHNLVVDGG 242
            SD ++ ++G  + V GG
Sbjct: 242 ASDAARFMTGQGINVTGG 259

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 24/253 (9%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           +VA++TG + G G   A  F   G +V   D+  +  E   +              V  D
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETAR--THWHAYADKVLRVRAD 60
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-FERILSINLVGAFL 131
           V  E D+  A+   + Q+G +D++ NNAG     +  +L     E F++++++N+ G FL
Sbjct: 61  VADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFL 120
Query: 132 G-----RNMLLGVCGIIGGAAT----------HAYTSSKHGLLGLMKNTAVELGRFGIRV 176
           G      +MLL   G+I   A+           AYT+SK  +L L K+ AV+    GIR 
Sbjct: 121 GCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180
Query: 177 NCVSPYAVSTPLAK---DFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS 233
           N V P  + TP+ +   D  +L D  L  +     G   +    A+A ++L  +++  V+
Sbjct: 181 NAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQ---VADAVMFLAGEDATYVN 237
Query: 234 GHNLVVDGGFAIV 246
           G  LV+DG +  +
Sbjct: 238 GAALVMDGAYTAI 250

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 121/250 (48%), Gaps = 24/250 (9%)
Query: 11  QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVH 70
           + KVAL+TG  RGIG   A++ +K  + V+         +SV  +I              
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA--- 99
Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF 130
            DV+K+++I   +N  +T++  +DI+ NNAG   +     + ND  E+E +L  NL   F
Sbjct: 100 GDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKND--EWEDVLRTNLNSLF 157
Query: 131 -----LGRNML----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
                + + M+            + G+ G      Y+SSK G++G  K+ A EL    I 
Sbjct: 158 YITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNIT 217
Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKCVSG 234
           VN ++P  +S+ +     K+++     + SN+  G +  PE+ A  A +L SD+S  ++G
Sbjct: 218 VNAIAPGFISSDMTD---KISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYING 274
Query: 235 HNLVVDGGFA 244
              V+DGG +
Sbjct: 275 RVFVIDGGLS 284

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 114/257 (44%), Gaps = 39/257 (15%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           RLQGKVAL+TGGA G+G    +L    GAKV  +DI +  G+ +  ++           +
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL------GERSMF 56
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-FERILSINLV 127
           V  DV+ E D    +     + G L+++ NNAG    + P  ++  + E F R+L IN  
Sbjct: 57  VRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGI---LLPGDMETGRLEDFSRLLKINTE 113
Query: 128 GAFLGRNMLLGVCGIIGGAATH--------------AYTSSKHGLLGLMKNTAVELGR-- 171
             F+G    +      GG+  +               Y++SK  +  L +  A+   +  
Sbjct: 114 SVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQG 173
Query: 172 FGIRVNCVSPYAVSTPLAKDFLK--------LADDGLGGMYSNLKGAVLEPEDAAEAALY 223
           + IRVN + P  + TP+ +  L         L D  L     N  G    PE  A+  L+
Sbjct: 174 YAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKL-----NRAGRAYMPERIAQLVLF 228
Query: 224 LGSDESKCVSGHNLVVD 240
           L SDES  +SG  L  D
Sbjct: 229 LASDESSVMSGSELHAD 245

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 119/254 (46%), Gaps = 29/254 (11%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+GKVAL+TG +RGIG+  A L ++ GAKV I     + G     D             +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKG-----M 63
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVG 128
             +VT  + IE  +     ++G +DI+ NNA   D  + N+L    + E+  I+  NL  
Sbjct: 64  ALNVTNPESIEAVLKAITDEFGGVDILVNNA---DITRDNLLMRMKEEEWSDIMETNLTS 120
Query: 129 AF-LGRNMLLG--------------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F L + +L G              V G +G A    Y ++K G++G  K+ A E+   G
Sbjct: 121 IFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRG 180
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKCV 232
           + VN V+P  + T + K    L D+      + +    L +P + A A  +L S E+  +
Sbjct: 181 VTVNTVAPGFIETDMTK---ALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYI 237
Query: 233 SGHNLVVDGGFAIV 246
           +G  L V+GG  ++
Sbjct: 238 TGETLHVNGGMYMI 251

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 121/254 (47%), Gaps = 29/254 (11%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
            +GK+AL+TG +RGIG   A   +  GAKV+     ++  +++   +            +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKG------L 56
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVG 128
             +VT    IE+ +     ++G++DI+ NNAG T D +   + D    E+  I+  NL  
Sbjct: 57  MLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDE---EWNDIIETNLSS 113
Query: 129 AFL--------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F               GR + +G V G +G      Y ++K GL+G  K+ A E+   G
Sbjct: 114 VFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRG 173
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKCV 232
           I VN V+P  + T + +    L+DD   G+ + +    L   ++ A A  +L SDE+  +
Sbjct: 174 ITVNVVAPGFIETDMTR---ALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYI 230
Query: 233 SGHNLVVDGGFAIV 246
           +G  L V+GG  +V
Sbjct: 231 TGETLHVNGGMYMV 244

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 47/267 (17%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
           M   L+ KV ++TG + GIG   A  F   G+KV+   I D  GE+              
Sbjct: 9   MFSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP-GEA-------------K 54
Query: 66  XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             ++ CDVT    ++ +++    +YG + ++ NNAG   E    I      E+ RI+ +N
Sbjct: 55  YDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI--ESYGKIESMSMGEWRRIIDVN 112
Query: 126 LVGAFLGRNM------------LLGVCGIIGGAATH---AYTSSKHGLLGLMKNTAVELG 170
           L G +                 ++ +  +     T    AY +SKH ++GL K+ A++  
Sbjct: 113 LFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYA 172
Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE------------PEDAA 218
              +R N V P  + TPL +   K A+  +G     ++  + E            P++ A
Sbjct: 173 PL-LRCNAVCPATIDTPLVR---KAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVA 228
Query: 219 EAALYLGSDESKCVSGHNLVVDGGFAI 245
            A  +L S E+  ++G  L VDGG +I
Sbjct: 229 SAVAFLASREASFITGTCLYVDGGLSI 255

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 120/254 (47%), Gaps = 29/254 (11%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+GKVAL+TG +RGIG+  A L ++ GAKV I     + G     D             +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKG-----M 63
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVG 128
             +VT  + IE  +     ++G +DI+ NNAG T D +   ++   + E+  I+  NL  
Sbjct: 64  ALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL---LMRMKEEEWSDIMETNLTS 120
Query: 129 AF-LGRNMLLG--------------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F L + +L G              V G +G A    + ++K G++G  K+ A E+   G
Sbjct: 121 IFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRG 180
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKCV 232
           + VN V+P  + T + K    L D+      + +    L +P + A A  +L S E+  +
Sbjct: 181 VTVNTVAPGFIETDMTK---ALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYI 237
Query: 233 SGHNLVVDGGFAIV 246
           +G  L V+GG  ++
Sbjct: 238 TGETLHVNGGMYMI 251

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 116/258 (44%), Gaps = 37/258 (14%)
Query: 5   LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXX 64
           L+ R    +  L+TGG RGIG   AR F+  G KV I     +  E              
Sbjct: 14  LVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLA---------- 63
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILS 123
               V CD+T  + +E A       +G ++++  NAG T D++   ++   + +F  ++ 
Sbjct: 64  ----VKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQL---LMRMSEEDFTSVVE 116
Query: 124 INLVGAFL--------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
            NL G F               GR +L+  V G++G A    Y +SK GL+G  ++ A E
Sbjct: 117 TNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARE 176
Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSD 227
           LG   I  N V+P  V T + K    L D+    + S +  G    PE+ A    +L SD
Sbjct: 177 LGSRNITFNVVAPGFVDTDMTK---VLTDEQRANIVSQVPLGRYARPEEIAATVRFLASD 233
Query: 228 ESKCVSGHNLVVDGGFAI 245
           ++  ++G  + VDGG  +
Sbjct: 234 DASYITGAVIPVDGGLGM 251

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 119/254 (46%), Gaps = 29/254 (11%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+GKVAL+TG +RGIG+  A L ++ GAKV I     + G     D             +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKG-----M 63
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVG 128
             +VT  + IE  +     ++G +DI+ NNA  T D +   ++   + E+  I+  NL  
Sbjct: 64  ALNVTNPESIEAVLKAITDEFGGVDILVNNAAITRDNL---LMRMKEEEWSDIMETNLTS 120
Query: 129 AF-LGRNMLLG--------------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F L + +L G              V G +G A    Y ++K G++G  K+ A E+   G
Sbjct: 121 IFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRG 180
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKCV 232
           + VN V+P  + T + K    L D+      + +    L +P + A A  +L S E+  +
Sbjct: 181 VTVNTVAPGFIETDMTK---ALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYI 237
Query: 233 SGHNLVVDGGFAIV 246
           +G  L V+GG  ++
Sbjct: 238 TGETLHVNGGMYMI 251

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 119/256 (46%), Gaps = 34/256 (13%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L GK ALITG + GIG+  A  +++ GA+V +A    D  + V  +I            +
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALP---I 86
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
            CDVT+   +   ++    + G +DI   NAG V      +LD    EF+RI   N+ G 
Sbjct: 87  RCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVS--VQAMLDMPLEEFQRIQDTNVTGV 144
Query: 130 FL-----GRNML-LGVCGIIGGAATHA------------YTSSKHGLLGLMKNTAVELGR 171
           FL      R M+  G+ G I   A+ +            Y +SK  ++ L K  AVEL  
Sbjct: 145 FLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAP 204
Query: 172 FGIRVNCVSPYAVST----PLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD 227
             IRVN VSP  + T    PLA D+  L +  +        G +  PE+     LYL S 
Sbjct: 205 HQIRVNSVSPGYIRTELVEPLA-DYHALWEPKIP------LGRMGRPEELTGLYLYLASA 257
Query: 228 ESKCVSGHNLVVDGGF 243
            S  ++G ++V+DGG+
Sbjct: 258 ASSYMTGSDIVIDGGY 273

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 90.5 bits (223), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 114/249 (45%), Gaps = 22/249 (8%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           RL GK A+ITG   GIG+  A  F+  GA V+++DI  D    V  +I            
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFA--- 64
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
             CD+T E+++    + A+++ GK+DI+ NNAG      P   D   A+F R   +N+  
Sbjct: 65  CRCDITSEQELSALADFAISKLGKVDILVNNAGGGG---PKPFDMPMADFRRAYELNVFS 121
Query: 129 AFLGRNMLLGVCGIIGGAATHAYTS---------------SKHGLLGLMKNTAVELGRFG 173
            F    ++       GG      TS               SK     L++N A +LG   
Sbjct: 122 FFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKN 181
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS 233
           IRVN ++P A+ T   K  +    +     ++ ++  + +P+D A AAL+L S  +  VS
Sbjct: 182 IRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR-RLGQPQDIANAALFLCSPAASWVS 240
Query: 234 GHNLVVDGG 242
           G  L V GG
Sbjct: 241 GQILTVSGG 249

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 29/254 (11%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
            +GK+AL+TG +RGIG   A   +  GAKV+     ++  +++   +            +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKG------L 56
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVG 128
             +VT    IE+ +     ++G++DI+ NNAG T D +   + D    E+  I+  NL  
Sbjct: 57  MLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDE---EWNDIIETNLSS 113
Query: 129 AFL--------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F               GR + +G V G +G      + ++K GL+G  K+ A E+   G
Sbjct: 114 VFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRG 173
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKCV 232
           I VN V+P  + T + +    L+DD   G+ + +    L   ++ A A  +L SDE+  +
Sbjct: 174 ITVNVVAPGFIETDMTR---ALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYI 230
Query: 233 SGHNLVVDGGFAIV 246
           +G  L V+GG  +V
Sbjct: 231 TGETLHVNGGMYMV 244

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 47/263 (17%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+ KV ++TG + GIG   A  F   G+KV+   I D  GE+                ++
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP-GEA-------------KYDHI 51
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
            CDVT    ++ +++    +YG + ++ NNAG   E    I      E+ RI+ +NL G 
Sbjct: 52  ECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI--ESYGKIESMSMGEWRRIIDVNLFGY 109
Query: 130 FLGRNM------------LLGVCGIIGGAATH---AYTSSKHGLLGLMKNTAVELGRFGI 174
           +                 ++ +  +     T    AY +SKH ++GL K+ A++     +
Sbjct: 110 YYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-L 168
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE------------PEDAAEAAL 222
           R N V P  + TPL +   K A+  +G     ++  + E            P++ A A  
Sbjct: 169 RCNAVCPATIDTPLVR---KAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVA 225
Query: 223 YLGSDESKCVSGHNLVVDGGFAI 245
           +L S E+  ++G  L VDGG +I
Sbjct: 226 FLASREASFITGTCLYVDGGLSI 248

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 111/261 (42%), Gaps = 40/261 (15%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           KVAL+TG  +GIG+  A    K G  V IAD  D   ++V  +I            V  D
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVA---VKVD 59
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERILSINLV 127
           V+    +  AV  A    G  D++ NNAG      ++ + P I+D       ++ +IN+ 
Sbjct: 60  VSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVD-------KVYNINVK 112
Query: 128 GAFLGRNM-------------LLGVC---GIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           G   G                ++  C   G +G      Y+SSK  + GL +  A +L  
Sbjct: 113 GVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAP 172
Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLG-----GMYSNLK----GAVLEPEDAAEAAL 222
            GI VN   P  V TP+  +  +   +  G     G     K    G + EPED A    
Sbjct: 173 LGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVS 232
Query: 223 YLGSDESKCVSGHNLVVDGGF 243
           YL S +S  ++G +L++DGG 
Sbjct: 233 YLASPDSDYMTGQSLLIDGGM 253

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 123/273 (45%), Gaps = 47/273 (17%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG---------ESVCKDIXXXX 60
           L GKVA ITG ARG G   A   +  GA ++  D+ D +          E +   +    
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 61  XXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFER 120
                      DV   + +  A+   + + G+LDI+  NAG    + P    +D   +  
Sbjct: 71  DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAG----IAPMSAGDDG--WHD 124
Query: 121 ILSINLVGAF--------------LGRNMLL-----GVCGIIGGAA---THAYTSSKHGL 158
           ++ +NL G +               G +++L     G+ G+  G+A   +  Y ++KHG+
Sbjct: 125 VIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGV--GSADPGSVGYVAAKHGV 182
Query: 159 LGLMKNTAVELGRFGIRVNCVSPYAVSTPL-----AKDFLK---LADDGLGGMYSNLKGA 210
           +GLM+  A  L    IRVN + P  V TP+      +++L     A D  G M + +   
Sbjct: 183 VGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVE 242
Query: 211 VLEPEDAAEAALYLGSDESKCVSGHNLVVDGGF 243
           VL PED A A  +L SD+++ ++G  L VD GF
Sbjct: 243 VLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 114/249 (45%), Gaps = 37/249 (14%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+ KV LITG   G+G+  A+ F+K+GAKV++ D KD       K +             
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD-----ATKTVDEIKAAGGEAWPD 374
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             DV   KD E  +   + +YG +DI+ NNAG + +   +     + E++ +  ++L+G 
Sbjct: 375 QHDVA--KDSEAIIKNVIDKYGTIDILVNNAGILRDR--SFAKMSKQEWDSVQQVHLIGT 430
Query: 130 F--------------LGRNM-LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F               GR + +    GI G      Y+SSK G+LGL K  A+E  +  I
Sbjct: 431 FNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNI 490
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG 234
           +VN V+P+A  T +    ++  D  L              +  A   +YLG+D+   V+G
Sbjct: 491 KVNIVAPHA-ETAMTLSIMREQDKNL-----------YHADQVAPLLVYLGTDDV-PVTG 537
Query: 235 HNLVVDGGF 243
               + GG+
Sbjct: 538 ETFEIGGGW 546

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 123/268 (45%), Gaps = 31/268 (11%)
Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXX 66
           + R   KVA+ITG + GIG  TA LF++ GAKV I     +  E   + I          
Sbjct: 1   MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNV 60
Query: 67  XYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQA--EFERILSI 124
             V  DVT +   +  ++T + ++GKLDI+ NNAG       +     Q+   ++  L++
Sbjct: 61  NSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNL 120
Query: 125 NLVGAFL-----------GRNMLLGVCGIIGGAATHA------YTSSKHGLLGLMKNTAV 167
           NL                 +  ++ +  I  G   HA      Y+ +K  +    +NTA+
Sbjct: 121 NLRSVIALTKKAVPHLSSTKGEIVNISSIASG--LHATPDFPYYSIAKAAIDQYTRNTAI 178
Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL--------KGAVLEPEDAAE 219
           +L + GIRVN +SP  V+T      + + ++     YS +         G + +P+D AE
Sbjct: 179 DLIQHGIRVNSISPGLVATGFGSA-MGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAE 237
Query: 220 AALYLGSDE-SKCVSGHNLVVDGGFAIV 246
              +L   + S  + GH LVVDGG +++
Sbjct: 238 VIAFLADRKTSSYIIGHQLVVDGGSSLI 265

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 119/253 (47%), Gaps = 21/253 (8%)
Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
           + L+ KVAL+T    GIG   AR  ++ GA V+++  K    E+V + +           
Sbjct: 10  KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQ---ENVDRTVATLQGEGLSVT 66
Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
              C V K +D E  V  AV  +G +DI+ +NA  V+    NI+D  +  +++IL +N+ 
Sbjct: 67  GTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAA-VNPFFGNIIDATEEVWDKILHVNVK 125
Query: 128 GAFLGRNMLLGVCGIIGGA---------ATHA------YTSSKHGLLGLMKNTAVELGRF 172
              L    ++      GG          A H       Y  SK  LLGL KN AVEL   
Sbjct: 126 ATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPR 185
Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKC 231
            IRVNC++P  + T  ++  L +       M  +L+   L  PED A    +L S+++  
Sbjct: 186 NIRVNCLAPGLIKTNFSQ-VLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASY 244
Query: 232 VSGHNLVVDGGFA 244
           ++G  +VV GG A
Sbjct: 245 ITGETVVVGGGTA 257

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 23/260 (8%)
Query: 1   MHANLMLRR--LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXX 58
           M ++ M RR  L  KVAL+T    GIG   AR  ++ GA V+++  K    ++V + +  
Sbjct: 2   MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQ---QNVDQAVAT 58
Query: 59  XXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEF 118
                       C V K +D E  V TAV  +G +DI+ +NA  V+    +I+D  +  +
Sbjct: 59  LQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAA-VNPFFGSIMDVTEEVW 117
Query: 119 ERILSINLVGAFLGRNMLL--------GVCGIIGGAATHA-------YTSSKHGLLGLMK 163
           ++ L IN+    L    ++        G   I+   A  +       Y  SK  LLGL K
Sbjct: 118 DKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTK 177
Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAAL 222
             A+EL    IRVNC++P  + T  ++  L +  +    M   L+   L EPED A    
Sbjct: 178 TLAIELAPRNIRVNCLAPGLIKTSFSR-MLWMDKEKEESMKETLRIRRLGEPEDCAGIVS 236
Query: 223 YLGSDESKCVSGHNLVVDGG 242
           +L S+++  ++G  +VV GG
Sbjct: 237 FLCSEDASYITGETVVVGGG 256

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 19/191 (9%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
           M ++  GKV L+TG    IG  TA   ++ G  + + D+  +  E     +         
Sbjct: 1   MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARS 60
Query: 66  XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             YV CDVT E+ +   V++ V  +GK+D +FNNAG      P + D    +F R+L+IN
Sbjct: 61  --YV-CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAP-VQDYPSDDFARVLTIN 116
Query: 126 LVGAF-----LGRNMLL----------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           + GAF     + R M+            + G+ G     AY +SK  ++ L +  A++L 
Sbjct: 117 VTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLA 176
Query: 171 RFGIRVNCVSP 181
            + IRVN +SP
Sbjct: 177 PYNIRVNAISP 187

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXX 66
           + R   K  +ITG + GIG  TA LF++ GA V I     +  E   + I          
Sbjct: 1   MPRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQV 60
Query: 67  XYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQA--EFERILSI 124
             V  DVT E   +  +N+ + Q+GK+D++ NNAG            DQ    + + L +
Sbjct: 61  NSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKL 120
Query: 125 NLVGAF-----------LGRNMLLGVCGIIGGAATHA----YTSSKHGLLGLMKNTAVEL 169
           NL                 +  ++ V  I+ G         Y  +K  L    ++TA++L
Sbjct: 121 NLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDL 180
Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--------GAVLEPEDAAEAA 221
            +FGIRVN VSP  V T    + + + D      Y+ +         GA  +PE  A   
Sbjct: 181 AKFGIRVNSVSPGMVETGFT-NAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANII 239
Query: 222 LYLGSDE-SKCVSGHNLVVDGGFAIV 246
           L+L     S  + G ++V DGG ++V
Sbjct: 240 LFLADRNLSFYILGQSIVADGGTSLV 265

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+GKVAL+TG +RGIG+  A L ++ GAKV I     + G     D              
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKGXA---- 61
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVG 128
             +VT  + IE  +     ++G +DI+ NNAG     + N+L    + E+  I   NL  
Sbjct: 62  -LNVTNPESIEAVLKAITDEFGGVDILVNNAGI---TRDNLLXRXKEEEWSDIXETNLTS 117
Query: 129 AF-LGRNMLLG--------------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F L + +L G              V G  G A    Y ++K G++G  K+ A E+   G
Sbjct: 118 IFRLSKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRG 177
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKCV 232
           + VN V+P  + T   K    L D+      + +    L +P + A A  +L S E+  +
Sbjct: 178 VTVNTVAPGFIETDXTK---ALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYI 234
Query: 233 SGHNLVVDGG 242
           +G  L V+GG
Sbjct: 235 TGETLHVNGG 244

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 125/266 (46%), Gaps = 50/266 (18%)
Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIA--DIKDDLGESVCKDIXXXXXXXX 64
           +     KVA++TGG+ GIG        ++GAKV+    D K D+  S             
Sbjct: 9   MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVS------------- 55
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
              +   DVT E++++ AV     +YG++DI+ NNAG +++  P  L   +  + RI+ +
Sbjct: 56  --DHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAG-IEQYSPLHLTPTEI-WRRIIDV 111
Query: 125 NLVGAFL------------GRNMLLGVCGIIGGAATH---AYTSSKHGLLGLMKNTAVEL 169
           N+ G++L            G   ++ +  +   AAT    AY +SKH LLGL ++ A++ 
Sbjct: 112 NVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDY 171
Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE------------PEDA 217
               IR N V P  + TP+    +K A   +G   + ++  + E            PE+ 
Sbjct: 172 AP-KIRCNAVCPGTIMTPM---VIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEV 227
Query: 218 AEAALYLGSDESKCVSGHNLVVDGGF 243
           AE   +L SD S  ++G  L VDGG 
Sbjct: 228 AEVVAFLASDRSSFITGACLTVDGGL 253

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 118/265 (44%), Gaps = 27/265 (10%)
Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXX 66
           + R  GK  +ITG + GIG   A +F+K GA+V I    +D  E   + I          
Sbjct: 21  MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKI 80
Query: 67  XYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE--FERILSI 124
             V  DVT+    ++ +NT + ++GK+DI+ NNAG    +     + DQ    +++   +
Sbjct: 81  NAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGA--NLADGTANTDQPVELYQKTFKL 138
Query: 125 NLVGA-----------FLGRNMLLGVCGIIGGAATHA----YTSSKHGLLGLMKNTAVEL 169
           N                  +  ++ V  I+ G   H+    Y  +K  L    + TA++L
Sbjct: 139 NFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDL 198
Query: 170 GRFGIRVNCVSPYAVSTPL--AKDFLKLADDGLGGMYSNLK-----GAVLEPEDAAEAAL 222
            + G+RVN VSP AV+T    A    + A D L     + K     G   +PE+ A   +
Sbjct: 199 IQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIV 258
Query: 223 YLGSDE-SKCVSGHNLVVDGGFAIV 246
           +L     S  + G ++V DGG  +V
Sbjct: 259 FLADRNLSSYIIGQSIVADGGSTLV 283

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 22/251 (8%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+G+VAL+TGG+RG+G   A+  ++ G  V++A    +L E+                  
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVAS--RNLEEASEAAQKLTEKYGVETMAF 76
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
            CDV+  ++++  +     ++GKLD + N AG            D  EF +++ +NL G 
Sbjct: 77  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLD--EFRQVIEVNLFGT 134
Query: 130 FL------------GRNMLLGVCGIIGGAAT----HAYTSSKHGLLGLMKNTAVELGRFG 173
           +                 ++ +  +     T     AY +SK G+  L K  A E GR+G
Sbjct: 135 YYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYG 194
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKCV 232
           IRVN ++P    T + +       + L  M   +  G    PED    A++L S+E+K V
Sbjct: 195 IRVNVIAPGWYRTKMTEAVFS-DPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYV 253
Query: 233 SGHNLVVDGGF 243
           +G  + VDGG+
Sbjct: 254 TGQIIFVDGGW 264

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 117/244 (47%), Gaps = 30/244 (12%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
            +GK+AL+TG +RGIG   A   +  GAKV+     ++  +++   +            +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKG------L 56
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVG 128
             +VT    IE+ +     ++G++DI+ NNAG T D +   + D    E+  I+  NL  
Sbjct: 57  MLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDE---EWNDIIETNLSS 113
Query: 129 AF-----LGRNMLLGVCG---IIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVS 180
            F     + R M+    G    IGG A   Y ++K GL+G  K+ A E+   GI VN V+
Sbjct: 114 VFRLSKAVMRAMMKKRHGRIITIGGQAN--YAAAKAGLIGFSKSLAREVASRGITVNVVA 171
Query: 181 PYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKCVSGHNLVV 239
           P          F++ +DD   G+ + +    L   ++ A A  +L SDE+  ++G  L V
Sbjct: 172 P---------GFIETSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHV 222
Query: 240 DGGF 243
           +GG 
Sbjct: 223 NGGM 226

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 31/209 (14%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
           M   + GKVAL+TG A+GIG   A      GAKV + D   + G   CK           
Sbjct: 1   MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQ-CKAALHEQFEPQK 59
Query: 66  XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             ++ CDV  ++ + +     V  +G+LDI+ NNAG           N++  +E+ L IN
Sbjct: 60  TLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV----------NNEKNWEKTLQIN 109
Query: 126 LV----GAFLGRNM--------------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
           LV    G +LG +               +  + G++  A    Y +SKHG++G  ++ A+
Sbjct: 110 LVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAAL 169
Query: 168 --ELGRFGIRVNCVSPYAVSTPLAKDFLK 194
              L   G+R+N + P  V+T + +   K
Sbjct: 170 AANLMNSGVRLNAICPGFVNTAILESIEK 198

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 31/212 (14%)
Query: 2   HANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXX 61
           H     R ++G VA+ITGGA G+G  TA      GA  ++ D+ +  GE+  K +     
Sbjct: 2   HMAAACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----- 56
Query: 62  XXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQA----E 117
                 +   DVT EKD++ A+  A  ++G++D+  N AG     K   L   Q     +
Sbjct: 57  -GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLED 115
Query: 118 FERILSINLVGAF---------LGRNM------------LLGVCGIIGGAATHAYTSSKH 156
           F+R+L +NL+G F         +G+N                V    G     AY++SK 
Sbjct: 116 FQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKG 175
Query: 157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPL 188
           G++G+    A +L   GIRV  ++P    TPL
Sbjct: 176 GIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 207

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 31/207 (14%)
Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXX 66
           +R ++G VA+ITGGA G+G  TA+     GA  ++ D+ +  GE+  K +          
Sbjct: 4   VRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKL------GGNC 57
Query: 67  XYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQA----EFERIL 122
            +   +VT EK+++ A+  A  ++G++D+  N AG    +K      +Q     +F+R++
Sbjct: 58  IFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVI 117
Query: 123 SINLVGAFLGRNMLLGVCG------------IIGGAAT---------HAYTSSKHGLLGL 161
           ++NL+G F    ++ GV G            II  A+           AY++SK G++G+
Sbjct: 118 NVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 177
Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPL 188
               A +L   GIRV  ++P   +TPL
Sbjct: 178 TLPIARDLAPIGIRVVTIAPGLFATPL 204

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 31/207 (14%)
Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXX 66
           +R ++G VA+ITGGA G+G  TA+     GA  ++ D+ +  GE+  K +          
Sbjct: 5   VRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKL------GGNC 58
Query: 67  XYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQA----EFERIL 122
            +   +VT EK+++ A+  A  ++G++D+  N AG    +K      +Q     +F+R++
Sbjct: 59  IFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVI 118
Query: 123 SINLVGAFLGRNMLLGVCG------------IIGGAAT---------HAYTSSKHGLLGL 161
           ++NL+G F    ++ GV G            II  A+           AY++SK G++G+
Sbjct: 119 NVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPL 188
               A +L   GIRV  ++P   +TPL
Sbjct: 179 TLPIARDLAPIGIRVVTIAPGLFATPL 205

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 31/207 (14%)
Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXX 66
           +R ++G VA+ITGGA G+G  TA+     GA  ++ D+ +  GE+  K +          
Sbjct: 5   VRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKL------GGNC 58
Query: 67  XYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQA----EFERIL 122
            +   +VT EK+++ A+  A  ++G++D+  N AG    +K      +Q     +F+R++
Sbjct: 59  IFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVI 118
Query: 123 SINLVGAFLGRNMLLGVCG------------IIGGAAT---------HAYTSSKHGLLGL 161
           ++NL+G F    ++ GV G            II  A+           AY++SK G++G+
Sbjct: 119 NVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPL 188
               A +L   GIRV  ++P   +TPL
Sbjct: 179 TLPIARDLAPIGIRVVTIAPGLFATPL 205

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 21/249 (8%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           R + KV ++TG   GIG+  A   ++ GA V++ADI  +  E+V K I            
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAIS--- 62
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPN-ILDNDQAEFERILSINLV 127
           V  DV+  +  +   +  + ++G +D + NNA     +K + +L  D   +++ +S+NL 
Sbjct: 63  VAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLD 122
Query: 128 GAFLGRNMLL------GVCGIIGGAATHAYTSSKH------GLLGLMKNTAVELGRFGIR 175
           GA      +       G   I+  ++T A+  S +      G+ GL +  + ELG   IR
Sbjct: 123 GALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNYYGLAKVGINGLTQQLSRELGGRNIR 182
Query: 176 VNCVSPYAVSTPLAKDFL--KLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS 233
           +N ++P  + T   +     ++ DD + G+  +  G    P+D     L+L SDE+  ++
Sbjct: 183 INAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGT---PDDLVGMCLFLLSDEASWIT 239
Query: 234 GHNLVVDGG 242
           G    VDGG
Sbjct: 240 GQIFNVDGG 248

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 31/206 (15%)
Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
           R ++G VA+ITGGA G+G  TA      GA  ++ D+ +  GE+  K +           
Sbjct: 6   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL------GNNCV 59
Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQA----EFERILS 123
           +   DVT EKD++ A+  A  ++G++D+  N AG     K   L   Q     +F+R+L 
Sbjct: 60  FAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLD 119
Query: 124 INLVGAF---------LGRNM------------LLGVCGIIGGAATHAYTSSKHGLLGLM 162
           +NL+G F         +G+N                V    G     AY++SK G++G+ 
Sbjct: 120 VNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMT 179
Query: 163 KNTAVELGRFGIRVNCVSPYAVSTPL 188
              A +L   GIRV  ++P    TPL
Sbjct: 180 LPIARDLAPIGIRVMTIAPGLFGTPL 205

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 31/206 (15%)
Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
           R ++G VA+ITGGA G+G  TA      GA  ++ D+ +  GE+  K +           
Sbjct: 6   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL------GNNCV 59
Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQA----EFERILS 123
           +   DVT EKD++ A+  A  ++G++D+  N AG     K   L   Q     +F+R+L 
Sbjct: 60  FAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLD 119
Query: 124 INLVGAF---------LGRNM------------LLGVCGIIGGAATHAYTSSKHGLLGLM 162
           +NL+G F         +G+N                V    G     AY++SK G++G+ 
Sbjct: 120 VNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMT 179
Query: 163 KNTAVELGRFGIRVNCVSPYAVSTPL 188
              A +L   GIRV  ++P    TPL
Sbjct: 180 LPIARDLAPIGIRVMTIAPGLFGTPL 205

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 119/268 (44%), Gaps = 39/268 (14%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           LQG+VA ITG ARG G   A   +  GA ++  DI   +  SV                V
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72
Query: 70  H----------CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFE 119
                       DV  +  +   V   + Q+G+LD++  NAG +   +   L ++Q  ++
Sbjct: 73  EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQ--WD 130
Query: 120 RILSINLVGAFLGRNMLLGVCGII----GGA-----------ATHA---YTSSKHGLLGL 161
            ++ +NL G +  R +   V  +I    GG+           AT     Y++SKHGL  L
Sbjct: 131 TVIGVNLTGTW--RTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTAL 188
Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPL--AKDFLKLADDGLGGMYSNLKGAV-----LEP 214
               A+ELG +GIRVN + PY+V TP+   +  +++       ++S     V     +  
Sbjct: 189 TNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTA 248
Query: 215 EDAAEAALYLGSDESKCVSGHNLVVDGG 242
           ++ A+   +L  D S  ++G  + VD G
Sbjct: 249 DEVADVVAWLAGDGSGTLTGTQIPVDKG 276

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 119/255 (46%), Gaps = 28/255 (10%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           KVA++TGGA+GIG   +   +  G  + +AD+     E   + I           +V  D
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQ-EEQAAETIKLIEAADQKAVFVGLD 61
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG 132
           VT + + ++A++ A  + G  D++ NNAG + ++KP +L+  + + ++I S+N+   F G
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAG-IAQIKP-LLEVTEEDLKQIYSVNVFSVFFG 119
Query: 133 RNML------LGVCG----------IIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV 176
                     LGV G          I G     AY+++K  + GL +  A EL   G  V
Sbjct: 120 IQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTV 179
Query: 177 NCVSPYAVSTPLAK----DFLKLADDGLGGMYSNLKGAVL-----EPEDAAEAALYLGSD 227
           N  +P  V T + +    +  K+    +G  +     ++       PED A    +L S+
Sbjct: 180 NAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASE 239
Query: 228 ESKCVSGHNLVVDGG 242
            S  V+G  ++VDGG
Sbjct: 240 NSNYVTGQVMLVDGG 254

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 27/254 (10%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           +L G+ AL+TG   GIGE  AR F   GA V +   ++D  + +  D+            
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL------GKDVFV 77
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLV 127
              +++  K I+     A  +   +DI+ NNAG T D +   + D D   ++ +L++NL 
Sbjct: 78  FSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQD---WDDVLAVNLT 134
Query: 128 GA-FLGRNM--------------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            A  L R +              +  + G++G      Y ++K GL+G  K  A E+   
Sbjct: 135 AASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASR 194
Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV 232
            I VNC++P  + + +     +   + +  M    +  +   E+ A A +YL SDE+  +
Sbjct: 195 NITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGI--GEEIAFATVYLASDEAAYL 252
Query: 233 SGHNLVVDGGFAIV 246
           +G  L ++GG A++
Sbjct: 253 TGQTLHINGGMAMI 266

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 114/261 (43%), Gaps = 32/261 (12%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+GKVA++TG   GIG   A   +  GA +++     D  E                 Y 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGF-GDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             D++K + +   V+ AV Q G++DI+ NNAG   +    I D    +++ IL++NL   
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTALIEDFPTEKWDAILALNLSAV 118
Query: 130 FLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F G    L                  G++  A   AY ++KHG++G  K TA+E    GI
Sbjct: 119 FHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178
Query: 175 RVNCVSPYAVSTPLA-KDFLKLADDG-----------LGGMYSNLKGAVLEPEDAAEAAL 222
             N + P  V TPL  K    LA+             L     +L+   + PE     A+
Sbjct: 179 TANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQ--FVTPEQLGGTAV 236
Query: 223 YLGSDESKCVSGHNLVVDGGF 243
           +L SD +  ++G  + VDGG+
Sbjct: 237 FLASDAAAQITGTTVSVDGGW 257

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 25/251 (9%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           RL GK AL+TG A+GIG+  A   +  GA V+++DI  +  ++    I            
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARA------ 56
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  D++    ++          G +DI+ NNA  V  V  + +D D   + +I+ +NL G
Sbjct: 57  IAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDH--WRKIIDVNLTG 114
Query: 129 AFL---------------GRNMLLGVCGIIGGAATH-AYTSSKHGLLGLMKNTAVELGRF 172
            F+               GR + +       G     AY ++K G++G  +  A ELG++
Sbjct: 115 TFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKY 174
Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV 232
            I  N V+P  + +   K        G   M   +KG   +PE  A+   +L SD+++ +
Sbjct: 175 NITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGK-GQPEHIADVVSFLASDDARWI 233
Query: 233 SGHNLVVDGGF 243
           +G  L VD G 
Sbjct: 234 TGQTLNVDAGM 244

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 40/258 (15%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIA--------DIKDDLGESVCKDIXXXXX 61
           L  +  L+TGG +GIG   A +F++ GA V +A         +  +LGE    ++     
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIG--- 95
Query: 62  XXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERI 121
                  V  DV+      +A  T V  +G LD++  NAG   E + + +  +Q     +
Sbjct: 96  -------VRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQ--LSEV 146
Query: 122 LSINLVGAFL------------GRNMLLGVCGIIGGAATHA----YTSSKHGLLGLMKNT 165
           L +N+ G               GR  ++    I G    +     Y +SK   LG M+  
Sbjct: 147 LDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTA 206
Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYL 224
           A+EL   G+ VN + P  +   L +  + + ++ + GM  ++   +L  P D    A +L
Sbjct: 207 AIELAPRGVTVNAILPGNI---LTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFL 263
Query: 225 GSDESKCVSGHNLVVDGG 242
            +DE+  ++G  +VVDGG
Sbjct: 264 ATDEAGYITGQAIVVDGG 281

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 30/266 (11%)
Query: 4   NLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIXXXXXX 62
           NL  +    K A+ITG   GIG   AR  +K GA +++      D   +V  ++      
Sbjct: 17  NLYFQSXXTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSG 76
Query: 63  XXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL 122
                +   D TK  +I +       ++G  DI+ NNAG   +    I D    +++RI+
Sbjct: 77  TVL--HHPADXTKPSEIADXXAXVADRFGGADILVNNAGV--QFVEKIEDFPVEQWDRII 132
Query: 123 SINLVGAF--------------LGRNM-LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
           ++NL  +F               GR + +    G++      AY ++KHG+ GL K  A+
Sbjct: 133 AVNLSSSFHTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVAL 192
Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSN------LKGA----VLEPEDA 217
           E+   G+ VN + P  V TPL +  +       G           LKG      +  E  
Sbjct: 193 EVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVXLKGQPTKKFITVEQV 252
Query: 218 AEAALYLGSDESKCVSGHNLVVDGGF 243
           A  ALYL  D++  ++G ++  DGG+
Sbjct: 253 ASLALYLAGDDAAQITGTHVSXDGGW 278

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 115/248 (46%), Gaps = 22/248 (8%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L   VA++TG A GIG   A  F+K GA V++ D+K +  E+V   I            +
Sbjct: 10  LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIG---L 66
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
            C+VT E+  E  +  A+ Q+GK+ ++ NNAG      P   D   ++FE    +NL   
Sbjct: 67  ECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGG---PKPFDMPMSDFEWAFKLNLFSL 123
Query: 130 F------------LGRNMLLGVCGIIG---GAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F             G   +L +  + G        +Y SSK  +  L +N A ++G  GI
Sbjct: 124 FRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGI 183
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG 234
           RVN ++P A+ T      L    +     ++ L G + E +D A AAL+L S  +  +SG
Sbjct: 184 RVNAIAPGAIKTDALATVLTPEIERAMLKHTPL-GRLGEAQDIANAALFLCSPAAAWISG 242
Query: 235 HNLVVDGG 242
             L V GG
Sbjct: 243 QVLTVSGG 250

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 114/265 (43%), Gaps = 45/265 (16%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           RL GK ALITG ARGIG   A  + + GA+V IADI  +   +   +I            
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACA------ 55
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  DVT +  I+  V   + ++G +DI+ NNA   D + P I++  +  ++R+ +IN+ G
Sbjct: 56  IALDVTDQASIDRCVAELLDRWGSIDILVNNAALFD-LAP-IVEITRESYDRLFAINVSG 113
Query: 129 AF-----LGRNMLLG-----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
                  + R M+ G             G  G A    Y ++K  ++ L ++  + L R 
Sbjct: 114 TLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRH 173
Query: 173 GIRVNCVSPYAVSTPLAKDF-LKLADDGLGGMYSNLK--------------GAVLEPEDA 217
           GI VN ++P  V          K AD      Y NL               G +   ED 
Sbjct: 174 GINVNAIAPGVVDGEHWDGVDAKFAD------YENLPRGEKKRQVGAAVPFGRMGRAEDL 227
Query: 218 AEAALYLGSDESKCVSGHNLVVDGG 242
              A++L + E+  +      VDGG
Sbjct: 228 TGMAIFLATPEADYIVAQTYNVDGG 252

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 114/261 (43%), Gaps = 32/261 (12%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+GKVA++TG   GIG   A   +  GA +++     D  E                 Y 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGF-GDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             D++K + +   V+ AV Q G++DI+ NNAG   +    I D    +++ IL++NL   
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTALIEDFPTEKWDAILALNLSAV 118
Query: 130 FLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F G    L                  G++  A   AY ++KHG++G  K TA+E    GI
Sbjct: 119 FHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178
Query: 175 RVNCVSPYAVSTPLA-KDFLKLADDG-----------LGGMYSNLKGAVLEPEDAAEAAL 222
             N + P  V +PL  K    LA+             L     +L+   + PE     A+
Sbjct: 179 TANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQ--FVTPEQLGGTAV 236
Query: 223 YLGSDESKCVSGHNLVVDGGF 243
           +L SD +  ++G  + VDGG+
Sbjct: 237 FLASDAAAQITGTTVSVDGGW 257

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 120/275 (43%), Gaps = 49/275 (17%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIAD-------------IKDDLGESVCKDI 56
            +GK ALITGGARG+G   A   ++ GA + I D               DDL E+V    
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVA--- 64
Query: 57  XXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQ 115
                          DV     +E+ V  A    G +DI   NAG +   + P +   + 
Sbjct: 65  -LVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEV---ES 120
Query: 116 AEFERILSINLVGAF----------LGRNM--LLGVCGIIGGAATHA---YTSSKHGLLG 160
           A+++ ++  NL G F          + RN   ++ V  ++G +A  A   Y SSK G++G
Sbjct: 121 AQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIG 180
Query: 161 LMKNTAVELGRFGIRVNCVSPYAVSTPLA----------KDFLKLADDGLGGMYSNLK-- 208
           L K  A +L  +GI VN V+P  + TP+            D  K     +  ++++L   
Sbjct: 181 LTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQ 240
Query: 209 -GAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG 242
               L+PE+   A L+L  + S  ++G  L +D G
Sbjct: 241 YAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAG 275

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 127/257 (49%), Gaps = 34/257 (13%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           RL GKV ++T  A+GIG+  A  F++ GAKV+  DI     ES  +++            
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDI----NESKLQELEKYPGIQTRVL- 57
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN--- 125
              DVTK+K I+   N    +  +LD++FN AG V      +LD ++ +++  +++N   
Sbjct: 58  ---DVTKKKQIDQFAN----EVERLDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRS 108
Query: 126 ---LVGAFLGR----------NMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
              ++ AFL +          NM      + G      Y+++K  ++GL K+ A +  + 
Sbjct: 109 MYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQ 168
Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK----GAVLEPEDAAEAALYLGSDE 228
           GIR NCV P  V TP  ++ ++   +        LK    G     E+ A   +YL SDE
Sbjct: 169 GIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDE 228
Query: 229 SKCVSGHNLVVDGGFAI 245
           S  V+G+ +++DGG+++
Sbjct: 229 SAYVTGNPVIIDGGWSL 245

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 36/255 (14%)
Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK---DDLGESVCKDIXXXXXXXX 64
           + L GKVA++TG ARGIG   A +F++ GA V+  D++   ++L E+  K          
Sbjct: 217 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK---------V 267
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQY-GKLDIMFNNAG-TVDEVKPNILDNDQAEFERIL 122
               +  DVT +  ++         + GK DI+ NNAG T D++  N+   D A ++ +L
Sbjct: 268 GGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANM---DDARWDAVL 324
Query: 123 SINLVGAFLGRNMLLG---------------VCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
           ++NL+        L+G               + GI G      Y ++K G++G+ +  A 
Sbjct: 325 AVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAP 384
Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG-GMYSNLKGAVLEPEDAAEAALYLGS 226
            L   GI +N V+P  + T +    + LA   +G  + S L+G   +P D AEA  Y  S
Sbjct: 385 GLAAKGITINAVAPGFIETQMTA-AIPLATREVGRRLNSLLQGG--QPVDVAEAIAYFAS 441
Query: 227 DESKCVSGHNLVVDG 241
             S  V+G+ + V G
Sbjct: 442 PASNAVTGNVIRVCG 456

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 36/255 (14%)
Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK---DDLGESVCKDIXXXXXXXX 64
           + L GKVA++TG ARGIG   A +F++ GA V+  D++   ++L E+  K          
Sbjct: 209 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK---------V 259
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQY-GKLDIMFNNAG-TVDEVKPNILDNDQAEFERIL 122
               +  DVT +  ++         + GK DI+ NNAG T D++  N+   D A ++ +L
Sbjct: 260 GGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANM---DDARWDAVL 316
Query: 123 SINLVGAFLGRNMLLG---------------VCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
           ++NL+        L+G               + GI G      Y ++K G++G+ +  A 
Sbjct: 317 AVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAP 376
Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG-GMYSNLKGAVLEPEDAAEAALYLGS 226
            L   GI +N V+P  + T +    + LA   +G  + S L+G   +P D AEA  Y  S
Sbjct: 377 GLAAKGITINAVAPGFIETQMTA-AIPLATREVGRRLNSLLQGG--QPVDVAEAIAYFAS 433
Query: 227 DESKCVSGHNLVVDG 241
             S  V+G+ + V G
Sbjct: 434 PASNAVTGNVIRVCG 448

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 113/261 (43%), Gaps = 32/261 (12%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+GKVA++TG   GIG   A   +  GA +++     D  E                 Y 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGF-GDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             D++K + +   V+ AV Q G++DI+ NNAG   +    I D    +++ IL++NL   
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTALIEDFPTEKWDAILALNLSAV 118
Query: 130 FLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F G    L                  G++  A   AY ++KHG++G  K TA+E    GI
Sbjct: 119 FHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178
Query: 175 RVNCVSPYAVSTPLA-KDFLKLADDG-----------LGGMYSNLKGAVLEPEDAAEAAL 222
             N + P  V  PL  K    LA+             L     +L+   + PE     A+
Sbjct: 179 TANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQ--FVTPEQLGGTAV 236
Query: 223 YLGSDESKCVSGHNLVVDGGF 243
           +L SD +  ++G  + VDGG+
Sbjct: 237 FLASDAAAQITGTTVSVDGGW 257

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 36/255 (14%)
Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK---DDLGESVCKDIXXXXXXXX 64
           + L GKVA++TG ARGIG   A +F++ GA V+  D++   ++L E+  K          
Sbjct: 201 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK---------V 251
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQY-GKLDIMFNNAG-TVDEVKPNILDNDQAEFERIL 122
               +  DVT +  ++         + GK DI+ NNAG T D++  N+   D A ++ +L
Sbjct: 252 GGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANM---DDARWDAVL 308
Query: 123 SINLVGAFLGRNMLLG---------------VCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
           ++NL+        L+G               + GI G      Y ++K G++G+ +  A 
Sbjct: 309 AVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAP 368
Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG-GMYSNLKGAVLEPEDAAEAALYLGS 226
            L   GI +N V+P  + T +    + LA   +G  + S L+G   +P D AEA  Y  S
Sbjct: 369 GLAAKGITINAVAPGFIETQMTA-AIPLATREVGRRLNSLLQGG--QPVDVAEAIAYFAS 425
Query: 227 DESKCVSGHNLVVDG 241
             S  V+G+ + V G
Sbjct: 426 PASNAVTGNVIRVCG 440

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 36/255 (14%)
Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK---DDLGESVCKDIXXXXXXXX 64
           + L GKVA++TG ARGIG   A +F++ GA V+  D++   ++L E+  K          
Sbjct: 230 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK---------V 280
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQY-GKLDIMFNNAG-TVDEVKPNILDNDQAEFERIL 122
               +  DVT +  ++         + GK DI+ NNAG T D++  N+   D A ++ +L
Sbjct: 281 GGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANM---DDARWDAVL 337
Query: 123 SINLVGAFLGRNMLLG---------------VCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
           ++NL+        L+G               + GI G      Y ++K G++G+ +  A 
Sbjct: 338 AVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAP 397
Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG-GMYSNLKGAVLEPEDAAEAALYLGS 226
            L   GI +N V+P  + T +    + LA   +G  + S L+G   +P D AEA  Y  S
Sbjct: 398 GLAAKGITINAVAPGFIETQMTA-AIPLATREVGRRLNSLLQGG--QPVDVAEAIAYFAS 454
Query: 227 DESKCVSGHNLVVDG 241
             S  V+G+ + V G
Sbjct: 455 PASNAVTGNVIRVCG 469

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 36/255 (14%)
Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK---DDLGESVCKDIXXXXXXXX 64
           + L GKVA++TG ARGIG   A +F++ GA V+  D++   ++L E+  K          
Sbjct: 193 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK---------V 243
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQY-GKLDIMFNNAG-TVDEVKPNILDNDQAEFERIL 122
               +  DVT +  ++         + GK DI+ NNAG T D++  N+   D A ++ +L
Sbjct: 244 GGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANM---DDARWDAVL 300
Query: 123 SINLVGAFLGRNMLLG---------------VCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
           ++NL+        L+G               + GI G      Y ++K G++G+ +  A 
Sbjct: 301 AVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAP 360
Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG-GMYSNLKGAVLEPEDAAEAALYLGS 226
            L   GI +N V+P  + T +    + LA   +G  + S L+G   +P D AEA  Y  S
Sbjct: 361 GLAAKGITINAVAPGFIETQMTA-AIPLATREVGRRLNSLLQGG--QPVDVAEAIAYFAS 417
Query: 227 DESKCVSGHNLVVDG 241
             S  V+G+ + V G
Sbjct: 418 PASNAVTGNVIRVCG 432

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 115/250 (46%), Gaps = 26/250 (10%)
Query: 14  VALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIXXXXXXXXXXXYVHCD 72
           V ++TG +RGIG+  A    K G KVL+   +     E V K I               D
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAIT---FGGD 59
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL- 131
           V+KE D+E  + TA+  +G +D++ NNAG   +    ++   +++++ ++ +NL G FL 
Sbjct: 60  VSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLC 117
Query: 132 -------------GRNM-LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVN 177
                        GR + +  V G+IG      Y ++K G++G  K  A E     I VN
Sbjct: 118 TQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVN 177
Query: 178 CVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLG-SDESKCVSGH 235
            V P  +++ +     KL +D    +   +  G   +PE+ A    +L  S  +  ++G 
Sbjct: 178 VVCPGFIASDMTA---KLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQ 234
Query: 236 NLVVDGGFAI 245
              +DGG AI
Sbjct: 235 AFTIDGGIAI 244

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 33/254 (12%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L GK +LITG + GIG   ARL  K G+KV+I+   ++  +S+   +             
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEV----- 66
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVG 128
            C++  +++  N     +++   LDI+  NAG T D +   + D D   F++++ INL  
Sbjct: 67  -CNLANKEECSN----LISKTSNLDILVCNAGITSDTLAIRMKDQD---FDKVIDINLKA 118
Query: 129 AFL--------------GRNM-LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F+              GR + +  + GI G      Y +SK GL+G+ K+ + E+   G
Sbjct: 119 NFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRG 178
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKCV 232
           I VN V+P  + + +     KL +     +   +  G    PED A A  +L S+ +  +
Sbjct: 179 ITVNAVAPGFIKSDMTD---KLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYI 235
Query: 233 SGHNLVVDGGFAIV 246
           +G  L V+GG  +V
Sbjct: 236 TGQTLHVNGGMLMV 249

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           +LQGKV+L+TG  RGIG   A   +  G+ V+I     +  ++V ++I            
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHG-- 61
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDE---VKPNILDNDQAEFERILSIN 125
           V  ++  E+ I  A          +DI+ NNAG   +   ++ ++LD     +E +L +N
Sbjct: 62  VEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLD-----WEEVLKVN 116
Query: 126 LVGAFL--------------GRNM-LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           L G FL              GR + +  V G  G      Y+++K GL+G  K+ A EL 
Sbjct: 117 LTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELA 176
Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDAAEAALYLGSDE 228
              + VN V+P  + T    D   +  + +   Y      G    PE+ A   L+L S+ 
Sbjct: 177 PRNVLVNAVAPGFIET----DMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSEL 232
Query: 229 SKCVSGHNLVVDGGF 243
           +  ++G  + V+GG 
Sbjct: 233 ASYITGEVIHVNGGM 247

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 36/250 (14%)
Query: 10  LQGKVALITGGA-RGIGECTARLFSKHGAKVLIADIKDD-LGESVCKDIXXXXXXXXXXX 67
           L+GKV L+T  A  GIG  TAR     GA V+I+D  +  LGE+  +D            
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGET--RDQLADLGLGRVEA 77
Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
            V CDVT  + ++  +   V + G+LD++ NNAG   +    ++D    E++R+L++ L 
Sbjct: 78  VV-CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTP--VVDMTDEEWDRVLNVTLT 134
Query: 128 GAFLGRNMLL---------GV----CGIIGGAATHA---YTSSKHGLLGLMKNTAVELGR 171
                    L         GV      ++G  A H+   Y ++K G++ L + +A+E   
Sbjct: 135 SVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVE 194
Query: 172 FGIRVNCVSP------YAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG 225
           FG+R+N VSP      +   T  ++   +LA D          G   EP + A    +L 
Sbjct: 195 FGVRINAVSPSIARHKFLEKTSSSELLDRLASD-------EAFGRAAEPWEVAATIAFLA 247
Query: 226 SDESKCVSGH 235
           SD S  ++G 
Sbjct: 248 SDYSSYMTGE 257

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 111/260 (42%), Gaps = 35/260 (13%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+GK AL+TG   GIG   A++ ++ GA +++    D         +           + 
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-----APALAEIARHGVKAVHH 56
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             D++    IE     A  ++G +DI+ NNAG +  V P +       +++I+++NL   
Sbjct: 57  PADLSDVAQIEALFALAEREFGGVDILVNNAG-IQHVAP-VEQFPLESWDKIIALNLSAV 114
Query: 130 FLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F G  + L                V G++G     AY ++KHG++GL K   +E     +
Sbjct: 115 FHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNV 174
Query: 175 RVNCVSPYAVSTPLAK-----------DFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
             N + P  V TPL +           D L+   D L     +L  A + PE   E  L+
Sbjct: 175 TCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSL--AFVTPEHLGELVLF 232
Query: 224 LGSDESKCVSGHNLVVDGGF 243
           L S+    V G    VDGG+
Sbjct: 233 LCSEAGSQVRGAAWNVDGGW 252

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 40/252 (15%)
Query: 16  LITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVT 74
           L+TGG++GIG+    L  ++    +I  DI+        K             ++  D+T
Sbjct: 8   LVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLK-------------FIKADLT 54
Query: 75  KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF---- 130
           K++DI N ++  + +    D +F NAG +  +K +I D D    +++L +N+  +     
Sbjct: 55  KQQDITNVLD--IIKNVSFDGIFLNAGIL--IKGSIFDIDIESIKKVLDLNVWSSIYFIK 110
Query: 131 -LGRNMLLGVCGIIGGA--------ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSP 181
            L  N+ +G   +  G+         + AYT SK  +    K+ A++L ++ IRVN V P
Sbjct: 111 GLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQXTKSLALDLAKYQIRVNTVCP 170
Query: 182 YAVSTPLAKDFLKLADDGLGGMYSNLK---------GAVLEPEDAAEAALYLGSDESKCV 232
             V T L ++ ++   + +G  +   +           + +P++ AE  ++L SD+SK  
Sbjct: 171 GTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFX 230
Query: 233 SGHNLVVDGGFA 244
           +G  + +DGG+ 
Sbjct: 231 TGGLIPIDGGYT 242

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 110/250 (44%), Gaps = 25/250 (10%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           RL GK AL+TG A+GIG+  A   +  GA V+++DI  +  ++    I            
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARA------ 56
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  D++    ++          G +DI+ NNA  V  V  + +D D   + +I+ +NL G
Sbjct: 57  IAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDH--WRKIIDVNLTG 114
Query: 129 AFL---------------GRNMLLGVCGIIGGAATH-AYTSSKHGLLGLMKNTAVELGRF 172
            F+               GR + +       G     AY ++K G++G  +  A ELG++
Sbjct: 115 TFIVTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKY 174
Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV 232
            I  N V+P  + +   K        G        KG   +PE  A+   +L SD+++ +
Sbjct: 175 NITANAVTPGLIESDGVKASPHNEAFGFVEXLQAXKGK-GQPEHIADVVSFLASDDARWI 233
Query: 233 SGHNLVVDGG 242
           +G  L VD G
Sbjct: 234 TGQTLNVDAG 243

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 124/253 (49%), Gaps = 32/253 (12%)
Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
           + L GKVA++TG ARGIG   A +F++ GA V+  D+     +   +D+           
Sbjct: 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDV-----DGAAEDLKRVADKVGGTA 263
Query: 68  YVHCDVTKEKDIENAVNTAVTQY--GKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSI 124
            +  DVT + D  + +   VT++  GK+DI+ NNAG T D++  N+   D+  ++ ++++
Sbjct: 264 -LTLDVTAD-DAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANM---DEKRWDAVIAV 318
Query: 125 NLVGAFLGRNMLLG---------------VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           NL+        L+G               + GI G      Y ++K G++GL +  A  L
Sbjct: 319 NLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVL 378
Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSDE 228
              GI +N V+P  + T +  + + LA   +G   ++L +G   +P D AE   Y  S  
Sbjct: 379 ADKGITINAVAPGFIETKM-TEAIPLATREVGRRLNSLFQGG--QPVDVAELIAYFASPA 435
Query: 229 SKCVSGHNLVVDG 241
           S  V+G+ + V G
Sbjct: 436 SNAVTGNTIRVCG 448

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 24/254 (9%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
           M   L+ KVA+ITG   GIG  T+R+ ++ GA+V++AD+ +        D+         
Sbjct: 5   MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPE-------TDLAGAAASVGR 57
Query: 66  XXYVH-CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
               H  D+T E  +   ++  +  +G+LDI+ NNA   D     +       ++   ++
Sbjct: 58  GAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTV 117
Query: 125 NLVGAFL------------GRNMLLGVCGIIGGAA---THAYTSSKHGLLGLMKNTAVEL 169
           N  G  L            G   ++ +      AA   + AY  +K  +  L +  A + 
Sbjct: 118 NARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQY 177
Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES 229
           GR G+R N ++P  V TP  +  L      +   + +L G + EP + AE   +L SD +
Sbjct: 178 GRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATH-HLAGRIGEPHEIAELVCFLASDRA 236
Query: 230 KCVSGHNLVVDGGF 243
             ++G  +  D G 
Sbjct: 237 AFITGQVIAADSGL 250

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 110/251 (43%), Gaps = 29/251 (11%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIXXXXXXXXXXXY 68
           L GK A +TGG+RGIG   A+  +  GA V +  +   +  ++V  +I            
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVA--- 85
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  D    + IE A+   V   G LDI+ N+AG        + +   A+F+ + ++N   
Sbjct: 86  IRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAP--LEETTVADFDEVXAVNFRA 143
Query: 129 AFL------------GRNMLLG--VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
            F+            GR + +G  +  ++       Y++SK  L GL K  A +LG  GI
Sbjct: 144 PFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGI 203
Query: 175 RVNCVSPYAVST---PLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC 231
            VN V P +  T   P   D  +   + +        G+  EP+D A    +L   + K 
Sbjct: 204 TVNIVHPGSTDTDXNPADGDHAEAQRERIA------TGSYGEPQDIAGLVAWLAGPQGKF 257
Query: 232 VSGHNLVVDGG 242
           V+G +L +DGG
Sbjct: 258 VTGASLTIDGG 268

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 109/265 (41%), Gaps = 43/265 (16%)
Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
           +RL+GK ALITG ARGIG   A  + + GA V IADI  +       +I           
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYA----- 58
Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
            V  DVT++  I+ A+   V   G LDI+ NNA   D + P I++  +  +E++ +IN+ 
Sbjct: 59  -VQXDVTRQDSIDAAIAATVEHAGGLDILVNNAALFD-LAP-IVEITRESYEKLFAINVA 115
Query: 128 GAFL------------GRNMLL----GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           G               GR   +       G  G A    Y ++K  ++ L ++  ++L +
Sbjct: 116 GTLFTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIK 175
Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--------------GAVLEPEDA 217
             I VN ++P  V             D L   Y N                G     ED 
Sbjct: 176 HRINVNAIAPGVVDGEHWDGV-----DALFARYENRPRGEKKRLVGEAVPFGRXGTAEDL 230
Query: 218 AEAALYLGSDESKCVSGHNLVVDGG 242
              A++L S ES  +      VDGG
Sbjct: 231 TGXAIFLASAESDYIVSQTYNVDGG 255

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 29/250 (11%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLI--ADIKDDLGESVCKDIXXXXXXXXXXXYVH 70
           K AL+TG +RGIG   A   ++ G  V +  A  K+   E+V ++I            + 
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEK-AEAVVEEIKAKGVDSFA---IQ 66
Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGA 129
            +V    +++  +   V+Q+G LD++ NNAG T D +   ++   + E++ ++  NL G 
Sbjct: 67  ANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL---LMRMKEQEWDDVIDTNLKGV 123
Query: 130 F---------LGRNM------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F         + R        L  V G +G      Y ++K G++GL K+ A EL   GI
Sbjct: 124 FNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGI 183
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKCVS 233
            VN V+P  + + +      L+D+    M + +  A   +  D A    +L SD++K ++
Sbjct: 184 TVNAVAPGFIVSDMTD---ALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYIT 240
Query: 234 GHNLVVDGGF 243
           G  + V+GG 
Sbjct: 241 GQTIHVNGGM 250

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 115/261 (44%), Gaps = 30/261 (11%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKV-LIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           L+ K  L+TGG +GIG      F+  GA +   A  + +L E + K              
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSV-- 69
Query: 69  VHCDVTKEKDIENAVNTAVTQYG-KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
             CD +   + E  + T  + +G KLDI+ NN G +   KP  LD    +F   +S NL 
Sbjct: 70  --CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS-KPT-LDYTAEDFSFHISTNLE 125
Query: 128 GAF----LGRNMLLG-----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            A+    L   +L             + G++  +    Y+++K  L  L +N A E    
Sbjct: 126 SAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASD 185
Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--GAVLEPEDAAEAALYLGSDESK 230
           GIR N V+P  ++TPLA+    + DD    +  + K  G   EPE+ +    +L    + 
Sbjct: 186 GIRANAVAPAVIATPLAE---AVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAAS 242
Query: 231 CVSGHNLVVDGGFAIVNAGFS 251
            ++G  + VDGG  +   GFS
Sbjct: 243 YITGQTICVDGGLTV--NGFS 261

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 115/253 (45%), Gaps = 27/253 (10%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L G+ AL+TG   G+GE  AR     GA V +   +++  + +  ++             
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIF------VF 58
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVG 128
             +++  + ++     A  + G +DI+ NNAG T D +   + D D   ++ +L++NL  
Sbjct: 59  PANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDED---WDAVLTVNLTS 115
Query: 129 AF-LGRNM--------------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F L R +              +  + G+ G      Y +SK GL+G  K+ A E+    
Sbjct: 116 VFNLTRELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRN 175
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS 233
           + VNC++P  + + +     +   D + G     +  V    D A A +YL SDE+  V+
Sbjct: 176 VTVNCIAPGFIESAMTGKLNEKQKDAIMGNIPMKRMGV--GADIAAAVVYLASDEAAYVT 233
Query: 234 GHNLVVDGGFAIV 246
           G  L V+GG A++
Sbjct: 234 GQTLHVNGGMAMI 246

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 115/253 (45%), Gaps = 27/253 (10%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L G+ AL+TG   G+GE  AR     GA V +   +++  + +  ++             
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIF------VF 61
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVG 128
             +++  + ++     A  + G +DI+ NNAG T D +   + D D   ++ +L++NL  
Sbjct: 62  PANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDED---WDAVLTVNLTS 118
Query: 129 AF-LGRNM--------------LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F L R +              +  + G+ G      Y +SK GL+G  K+ A E+    
Sbjct: 119 VFNLTRELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRN 178
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS 233
           + VNC++P  + + +     +   D + G     +  V    D A A +YL SDE+  V+
Sbjct: 179 VTVNCIAPGFIESAMTGKLNEKQKDAIMGNIPMKRMGV--GADIAAAVVYLASDEAAYVT 236
Query: 234 GHNLVVDGGFAIV 246
           G  L V+GG A++
Sbjct: 237 GQTLHVNGGMAMI 249

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 77.4 bits (189), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 114/264 (43%), Gaps = 40/264 (15%)
Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
           +RL  K+A+ITG   GIG   A+ F   GA+V I   + D+ ++   +I           
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVG----- 79
Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFER-- 120
            +  D     +++        + G++D++F NAG      + EV     D+    F+R  
Sbjct: 80  -IQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXLPLGEVTEEQYDD---TFDRNV 135
Query: 121 ---ILSINLVGAFLGRN---MLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
              + ++      L R    +L G   G  G  A   Y +SK  L    +N  ++L   G
Sbjct: 136 KGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRG 195
Query: 174 IRVNCVSPYAVST----------PLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAAL 222
           IR+N +SP    T          P+ +  L      L  + + +  G V   E+ A AAL
Sbjct: 196 IRINTLSPGPTETTGLVELAGKDPVQQQGL------LNALAAQVPXGRVGRAEEVAAAAL 249
Query: 223 YLGSDESKCVSGHNLVVDGGFAIV 246
           +L SD+S  V+G  L VDGG A V
Sbjct: 250 FLASDDSSFVTGAELFVDGGSAQV 273

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 35/259 (13%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           +VAL+TG   GIG   AR   K G +V +    ++   +  K++              CD
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT---CD 83
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGT---------VDEVKPNILDNDQAEFERILS 123
           V    +IE  V   V +YG +D++ NNAG           DE+  ++++ +     R+  
Sbjct: 84  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 143
Query: 124 INL-VGAFLGRNMLLGVCGIIGGAAT-------HA--YTSSKHGLLGLMKNTAVELGRFG 173
             L  G  L R    G   I+  A+T       HA  Y++SKHG++G  K   +EL R G
Sbjct: 144 QVLKAGGMLER----GTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 199
Query: 174 IRVNCVSPYAVSTPLA-------KDFLKLA-DDGLGGMYSNLK-GAVLEPEDAAEAALYL 224
           I VN V P  V TP+A        D  +++ ++    + + +  G  ++P + AE   YL
Sbjct: 200 ITVNAVCPGWVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 259
Query: 225 GSDESKCVSGHNLVVDGGF 243
               +  V+   L V GG 
Sbjct: 260 IGPGAAAVTAQALNVCGGL 278

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 113/257 (43%), Gaps = 31/257 (12%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           +VAL+TG   GIG   AR   K G +V +    ++   +  K++              CD
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT---CD 79
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG 132
           V    +IE  V   V +YG +D++ NNAG +       L ++   +  ++  NL G F  
Sbjct: 80  VRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADEL--WLDVVETNLTGVFRV 137
Query: 133 RNMLLGVCGII-------------GG--AATHA--YTSSKHGLLGLMKNTAVELGRFGIR 175
              +L   G++             GG     HA  Y++SKHG++G  K   +EL R GI 
Sbjct: 138 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 197
Query: 176 VNCVSPYAVSTPLA-------KDFLKLA-DDGLGGMYSNLK-GAVLEPEDAAEAALYLGS 226
           VN V P  V TP+A        D  +++ ++    + + +  G  ++P + AE   YL  
Sbjct: 198 VNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIG 257
Query: 227 DESKCVSGHNLVVDGGF 243
             +  V+   L V GG 
Sbjct: 258 PGAAAVTAQALNVCGGL 274

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 113/257 (43%), Gaps = 31/257 (12%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           +VAL+TG   GIG   AR   K G +V +    ++   +  K++              CD
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT---CD 83
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG 132
           V    +IE  V   V +YG +D++ NNAG +       L ++   +  ++  NL G F  
Sbjct: 84  VRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADEL--WLDVVETNLTGVFRV 141
Query: 133 RNMLLGVCGII-------------GG--AATHA--YTSSKHGLLGLMKNTAVELGRFGIR 175
              +L   G++             GG     HA  Y++SKHG++G  K   +EL R GI 
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 176 VNCVSPYAVSTPLA-------KDFLKLA-DDGLGGMYSNLK-GAVLEPEDAAEAALYLGS 226
           VN V P  V TP+A        D  +++ ++    + + +  G  ++P + AE   YL  
Sbjct: 202 VNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIG 261
Query: 227 DESKCVSGHNLVVDGGF 243
             +  V+   L V GG 
Sbjct: 262 PGAAAVTAQALNVCGGL 278

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 111/253 (43%), Gaps = 30/253 (11%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L G+ A++TG   GIG   A  +++ GA VL     D + E V  +I             
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKE-VADEIADGGGS------A 81
Query: 70  HCDVTKEKDIENAVNTA--VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
              V    D+E A N A  +    ++D++ NNAG +        +     +  +L++NL 
Sbjct: 82  EAVVADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAE--EVSLGRWREVLTVNLD 139
Query: 128 GAFL-----GRNMLLGVCGII----------GGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            A++     G  ML    G I          GG    AY +SKH ++GL +  A E    
Sbjct: 140 AAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGR 199
Query: 173 GIRVNCVSP-YAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESK 230
           G+ VN ++P Y V+   A   L+  D+    + + +  G    PED    A++L SD + 
Sbjct: 200 GVGVNALAPGYVVTANTAA--LRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAAS 257
Query: 231 CVSGHNLVVDGGF 243
            V G  L VDGG+
Sbjct: 258 YVHGQVLAVDGGW 270

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 35/259 (13%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           +VAL+TG   GIG   AR   K G +V +    ++   +  K++              CD
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT---CD 83
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGT---------VDEVKPNILDNDQAEFERILS 123
           V    +IE  V   V +YG +D++ NNAG           DE+  ++++ +     R+  
Sbjct: 84  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 143
Query: 124 INL-VGAFLGRNMLLGVCGIIGGAAT-------HA--YTSSKHGLLGLMKNTAVELGRFG 173
             L  G  L R    G   I+  A+T       HA  Y++SKHG++G  K   +EL R G
Sbjct: 144 QVLKAGGMLER----GTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 199
Query: 174 IRVNCVSPYAVSTPLA-------KDFLKLA-DDGLGGMYSNLK-GAVLEPEDAAEAALYL 224
           I VN V P  V TP+A        D  +++ ++    + + +  G  ++P + AE   YL
Sbjct: 200 ITVNAVCPGFVETPMAASVREHFSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 259
Query: 225 GSDESKCVSGHNLVVDGGF 243
               +  V+   L V GG 
Sbjct: 260 IGPGAAAVTAQALNVCGGL 278

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 35/259 (13%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           +VAL+TG   GIG   AR   K G +V +    ++   +  K++              CD
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT---CD 83
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGT---------VDEVKPNILDNDQAEFERILS 123
           V    +IE  V   V +YG +D++ NNAG           DE+  ++++ +     R+  
Sbjct: 84  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 143
Query: 124 INL-VGAFLGRNMLLGVCGIIGGAAT-------HA--YTSSKHGLLGLMKNTAVELGRFG 173
             L  G  L R    G   I+  A+T       HA  Y++SKHG++G  K   +EL R G
Sbjct: 144 QVLKAGGMLER----GTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 199
Query: 174 IRVNCVSPYAVSTPLA-------KDFLKLA-DDGLGGMYSNLK-GAVLEPEDAAEAALYL 224
           I VN V P  V TP+A        D  +++ ++    + + +  G  ++P + AE   YL
Sbjct: 200 ITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 259
Query: 225 GSDESKCVSGHNLVVDGGF 243
               +  V+   L V GG 
Sbjct: 260 IGPGAAAVTAQALNVCGGL 278

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 35/259 (13%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           +VAL+TG   GIG   AR   K G +V +    ++   +  K++              CD
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT---CD 79
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGT---------VDEVKPNILDNDQAEFERILS 123
           V    +IE  V   V +YG +D++ NNAG           DE+  ++++ +     R+  
Sbjct: 80  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 139
Query: 124 INL-VGAFLGRNMLLGVCGIIGGAAT-------HA--YTSSKHGLLGLMKNTAVELGRFG 173
             L  G  L R    G   I+  A+T       HA  Y++SKHG++G  K   +EL R G
Sbjct: 140 QVLKAGGMLER----GTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 195
Query: 174 IRVNCVSPYAVSTPLA-------KDFLKLA-DDGLGGMYSNLK-GAVLEPEDAAEAALYL 224
           I VN V P  V TP+A        D  +++ ++    + + +  G  ++P + AE   YL
Sbjct: 196 ITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 255
Query: 225 GSDESKCVSGHNLVVDGGF 243
               +  V+   L V GG 
Sbjct: 256 IGPGAAAVTAQALNVCGGL 274

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 35/259 (13%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           +VAL+TG   GIG   AR   K G +V +    ++   +  K++              CD
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT---CD 83
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGT---------VDEVKPNILDNDQAEFERILS 123
           V    +IE  V   V +YG +D++ NNAG           DE+  ++++ +     R+  
Sbjct: 84  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 143
Query: 124 INL-VGAFLGRNMLLGVCGIIGGAAT-------HA--YTSSKHGLLGLMKNTAVELGRFG 173
             L  G  L R    G   I+  A+T       HA  Y++SKHG++G  K   +EL R G
Sbjct: 144 QVLKAGGMLER----GTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTG 199
Query: 174 IRVNCVSPYAVSTPLA-------KDFLKLA-DDGLGGMYSNLK-GAVLEPEDAAEAALYL 224
           I VN V P  V TP+A        D  +++ ++    + + +  G  ++P + AE   YL
Sbjct: 200 ITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 259
Query: 225 GSDESKCVSGHNLVVDGGF 243
               +  V+   L V GG 
Sbjct: 260 IGPGAAAVTAQALNVCGGL 278

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 24/254 (9%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
           M + L  +VA++TG +RGIG   A   ++ GA V+     +   E +             
Sbjct: 22  MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRG 81
Query: 66  XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSI 124
                 D T    ++  V + + ++G L+++ NNAG T D++   + D+   E++ ++  
Sbjct: 82  AVLNVNDATA---VDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDD---EWDAVIDT 135
Query: 125 NLVGAF-LGRNML-----------LGVCGIIGGAATHA---YTSSKHGLLGLMKNTAVEL 169
           NL   F L R +L           + +  ++G A       Y ++K G+ G+ +  A E+
Sbjct: 136 NLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREI 195
Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES 229
           G  GI VNCV+P  + T + K   +     L        G +  PED A A  +L S ++
Sbjct: 196 GSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIP--LGRLGSPEDIAHAVAFLASPQA 253
Query: 230 KCVSGHNLVVDGGF 243
             ++G  L V+GG 
Sbjct: 254 GYITGTTLHVNGGM 267

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 35/259 (13%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           +VAL+TG   GIG   AR   K G +V +    ++   +  K++              CD
Sbjct: 7   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT---CD 63
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGT---------VDEVKPNILDNDQAEFERILS 123
           V    +IE  V   V +YG +D++ NNAG           DE+  ++++ +     R+  
Sbjct: 64  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 123
Query: 124 INL-VGAFLGRNMLLGVCGIIGGAAT-------HA--YTSSKHGLLGLMKNTAVELGRFG 173
             L  G  L R    G   I+  A+T       HA  Y++SKHG++G  K   +EL R G
Sbjct: 124 QVLKAGGMLER----GTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 179
Query: 174 IRVNCVSPYAVSTPLA-------KDFLKLA-DDGLGGMYSNLK-GAVLEPEDAAEAALYL 224
           I VN V P  V TP+A        D  +++ ++    + + +  G  ++P + AE   YL
Sbjct: 180 ITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 239
Query: 225 GSDESKCVSGHNLVVDGGF 243
               +  V+   L V GG 
Sbjct: 240 IGPGAAAVTAQALNVCGGL 258

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 29/254 (11%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L  ++AL+TG +RGIG   A   +  GAKV + +     G +                 V
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAV-NYASSAGAADEVV-AAIAAAGGEAFAV 83
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             DV++E ++E      + ++G+LD++ NNAG   +    +L   + +++ +L +NL G 
Sbjct: 84  KADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTL--LLRMKRDDWQSVLDLNLGGV 141
Query: 130 FL--------------GRNM-LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           FL              GR + +  V G +G      Y+++K G++GL K  A EL   GI
Sbjct: 142 FLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGI 201
Query: 175 RVNCVSPYAVSTPLAKDFL--KLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC- 231
            VN V+P  ++T +  +    KL +    G Y        E  + A    +L +D +   
Sbjct: 202 TVNAVAPGFIATDMTSELAAEKLLEVIPLGRYG-------EAAEVAGVVRFLAADPAAAY 254
Query: 232 VSGHNLVVDGGFAI 245
           ++G  + +DGG  +
Sbjct: 255 ITGQVINIDGGLVM 268

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 114/258 (44%), Gaps = 47/258 (18%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLI--ADIKDDLGESVCKDIXXXXXXXXXXXYVH 70
           K AL+TG +RGIG   A   ++ G  V +  A  K+   E+V ++I            + 
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEK-AEAVVEEIKAKGVDSFA---IQ 60
Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVGA 129
            +V    +++  +   V+Q+G LD++ NNAG     + N+L    + E++ ++  NL G 
Sbjct: 61  ANVADADEVKAXIKEVVSQFGSLDVLVNNAGIT---RDNLLXRXKEQEWDDVIDTNLKGV 117
Query: 130 F----------LGRNM-----LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F          L +       L  V G +G      Y ++K G++GL K+ A EL   GI
Sbjct: 118 FNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGI 177
Query: 175 RVNCVSP-YAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAAEAALYL 224
            VN V+P + VS            D    +   LK   L         +  D A    +L
Sbjct: 178 TVNAVAPGFIVS------------DXTDALSDELKEQXLTQIPLARFGQDTDIANTVAFL 225
Query: 225 GSDESKCVSGHNLVVDGG 242
            SD++K ++G  + V+GG
Sbjct: 226 ASDKAKYITGQTIHVNGG 243

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 107/253 (42%), Gaps = 41/253 (16%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           + AL+TGG+RGIG   A      G +V IA    +        +            +  D
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVP-----------LPTD 51
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL- 131
           + K+ D +  V  A+   G L ++ + A  V+  KP  L+    E+ R+L ++L  AFL 
Sbjct: 52  LEKD-DPKGLVKRALEALGGLHVLVH-AAAVNVRKPA-LELSYEEWRRVLYLHLDVAFLL 108
Query: 132 -------------GRNMLLGVCGII---GGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
                        GR + +G        G     AYT++K  LLGL +  A E  R GIR
Sbjct: 109 AQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIR 168
Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-----GAVLEPEDAAEAALYLGSDESK 230
           VN + P  V T       +  +     +Y  +      G    PE+ A  A  L  DE++
Sbjct: 169 VNLLCPGYVETEFTLPLRQNPE-----LYEPITARIPMGRWARPEEIARVAAVLCGDEAE 223
Query: 231 CVSGHNLVVDGGF 243
            ++G  + VDGGF
Sbjct: 224 YLTGQAVAVDGGF 236

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 24/250 (9%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           LQG+  ++TGG +GIG   A +F++ GA V +A       ++   D+            V
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIG--V 65
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             DV+     +     AV ++G +D++  NAG   +     +  +Q     I ++N+ G 
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQ--LNGIFAVNVNGT 123
Query: 130 FL--------------GRNMLL-GVCGIIGGAATHA-YTSSKHGLLGLMKNTAVELGRFG 173
           F               GR +L   + G I G    + Y ++K   LG M+  A+EL    
Sbjct: 124 FYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHK 183
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKCV 232
           I VN + P  + T   +  L+  ++ +  M  ++  GA+  PED    A +L + E+  +
Sbjct: 184 ITVNAIMPGNIMT---EGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYI 240
Query: 233 SGHNLVVDGG 242
           +G  + VDGG
Sbjct: 241 TGQAIAVDGG 250

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 56/280 (20%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL----------GESVCKDIXXX 59
           + G+V ++TG   GIG   A  F+  GA+V++ DI   L           +SV  +I   
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84
Query: 60  XXXXXXXXYVHCDVTKEKDIENA---VNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQA 116
                       D +   D + A   + TAV  +G LD++ NNAG V +    I +  + 
Sbjct: 85  GGEAV------ADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRM--IANTSEE 136
Query: 117 EFERILSINLVGAFL--------------------GR--NMLLGVCGIIGGAATHAYTSS 154
           EF+ +++++L G F                     GR  N   G  G+ G      Y+++
Sbjct: 137 EFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG-AGLQGSVGQGNYSAA 195
Query: 155 KHGLLGLMKNTAVELGRFGIRVNCVSPYA---VSTPLAKDFLKLADDGLGGMYSNLKGAV 211
           K G+  L    A E+GR+G+ VN ++P A   ++  +  + +   D     M        
Sbjct: 196 KAGIATLTLVGAAEMGRYGVTVNAIAPSARTRMTETVFAEMMATQDQDFDAM-------- 247
Query: 212 LEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFS 251
             PE+ +   ++LGS E++ V+G    V+GG   V  G++
Sbjct: 248 -APENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWA 286

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L GK AL+TG ARG+G   A   +  GA+V++ DI+  L   + + +            V
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATL---LAESVDTLTRKGYDAHGV 63
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             DVT E  IE A +    +   +DI+ NNAG +   KP +++ +   +++++  NL  A
Sbjct: 64  AFDVTDELAIEAAFSKLDAEGIHVDILINNAG-IQYRKP-MVELELENWQKVIDTNLTSA 121
Query: 130 FL----------GRN---MLLGVCGIIGGAA---THAYTSSKHGLLGLMKNTAVELGRFG 173
           FL           RN    ++ +  +   AA      YT++K G+  L  + A E  +F 
Sbjct: 122 FLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFN 181
Query: 174 IRVNCVSPYAVSTPLAKDFL--KLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC 231
           I+ N + P  + T +    +  K  D  +     + +     PE+    A++L S  S  
Sbjct: 182 IQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWG--RPEELIGTAIFLSSKASDY 239
Query: 232 VSGHNLVVDGGFAIV 246
           ++G  + VDGG+  V
Sbjct: 240 INGQIIYVDGGWLAV 254

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 116/266 (43%), Gaps = 42/266 (15%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX---- 65
           L+GK A++TG   GIG   A   +K GA V+I    +  G+   +DI             
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVI----NGFGQP--EDIERERSTLESKFGV 55
Query: 66  -XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
              Y++ D++  +   + +  A    G LDI+ NNAG +    P I +    ++  I+++
Sbjct: 56  KAYYLNADLSDAQATRDFIAKAAEALGGLDILVNNAG-IQHTAP-IEEFPVDKWNAIIAL 113
Query: 125 NLVGAFLGRNMLLGVC---------------GIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           NL   F G    L +                G++      AY ++KHG++GL K TA+E 
Sbjct: 114 NLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALEN 173
Query: 170 GRFGIRVNCVSPYAVSTPLAK------------DFLKLADDGLGGMYSNLKGAVLEPEDA 217
              GI  N + P  V TPL +            D    A + L     +L+   + PE  
Sbjct: 174 AGKGITCNAICPGWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQ--FVTPEQL 231
Query: 218 AEAALYLGSDESKCVSGHNLVVDGGF 243
             AA++L S  +  ++G  L +DGG+
Sbjct: 232 GGAAVFLSSAAADQMTGTTLSLDGGW 257

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 113/267 (42%), Gaps = 45/267 (16%)
Query: 5   LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLI---ADIKDDLGESVCKDIXXXXX 61
           L L  L+GKVA +TG + GIG   A  +++ GA V I   +   D+  E + K       
Sbjct: 27  LDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSK 86
Query: 62  XXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERI 121
                    C+++  K +E  ++     +G +D+   NAG      P I  ++   + +I
Sbjct: 87  A------YKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKI 140
Query: 122 LSINLVGAFL------------GRNMLLGVCGIIGGAAT-----HAYTSSKHGLLGLMKN 164
           +S++L G +             G+  L+    I G           Y ++K     L K+
Sbjct: 141 ISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKS 200
Query: 165 TAVELGRFGIRVNCVSPYAVSTPL----AKD----FLKLADDGLGGMYSNLKGAVLEPED 216
            A+E   F  RVN +SP  + T +    +KD    + +L   G  G+   L G       
Sbjct: 201 LAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGY----- 254
Query: 217 AAEAALYLGSDESKCVSGHNLVVDGGF 243
                LYL S+ S   +G ++V+DGG+
Sbjct: 255 -----LYLASNASTFTTGSDVVIDGGY 276

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 27/260 (10%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
           M  RL+  +AL+TG   GIG   +   +  GA V   D+     +   + +         
Sbjct: 1   MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGP 60
Query: 66  XXYVH----CDVTKEKDIENAVNTAVTQYGK-LDIMFNNAG-TVDEVKPNILDNDQAEFE 119
               H     DV++ +     +      + +   ++ + AG T DE    +L   + +++
Sbjct: 61  PRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEF---LLHMSEDDWD 117
Query: 120 RILSINLVGAFL-------------GRNMLLGVCGI---IGGAATHAYTSSKHGLLGLMK 163
           +++++NL G FL              R  ++ +  I   +G      Y +SK G++GL +
Sbjct: 118 KVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQ 177
Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
             A ELGR GIR N V P  ++TP+ +   +   D +  M     G + +PED A+   +
Sbjct: 178 TAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIP--MGHLGDPEDVADVVAF 235
Query: 224 LGSDESKCVSGHNLVVDGGF 243
           L S++S  ++G ++ V GG 
Sbjct: 236 LASEDSGYITGTSVEVTGGL 255

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 31/259 (11%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+GKVAL+TG  RGIG   A    + G KV++        ES  + +            V
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST--ESAEEVVAAIKKNGSDAACV 84
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             +V   +DI      AV  +GKLDI+ +N+G V     ++ D    EF+R+ +IN  G 
Sbjct: 85  KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS--FGHVKDVTPEEFDRVFTINTRGQ 142
Query: 130 FL------------GRNMLLG-VCGIIGGAATHA-YTSSKHGLLGLMKNTAVELGRFGIR 175
           F             GR +L+G + G       HA Y+ SK  +    +  A+++    I 
Sbjct: 143 FFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKIT 202
Query: 176 VNCVSPYAVSTPL----AKDFL--------KLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
           VN V+P  + T +     ++++        +  D+     +S L+   L P D A    +
Sbjct: 203 VNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGL-PIDIARVVCF 261
Query: 224 LGSDESKCVSGHNLVVDGG 242
           L S++   V+G  + +DGG
Sbjct: 262 LASNDGGWVTGKVIGIDGG 280

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 121/261 (46%), Gaps = 20/261 (7%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY- 68
           LQG+VA++TGGA GIG+   +   + G+ V+IA  K +  +S   ++             
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 69  -VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
            + C++  E+++ N V + +  +GK++ + NN G    + P    + +  +  +L  NL 
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG-QFLSPAEHISSKG-WHAVLETNLT 133
Query: 128 GAFL-------------GRNMLLGVCGIIGGAATHAYT-SSKHGLLGLMKNTAVELGRFG 173
           G F              G +++  +     G     ++ +++ G+  L K+ A+E    G
Sbjct: 134 GTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSG 193
Query: 174 IRVNCVSPYAVSTPLA-KDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKC 231
           IR+NCV+P  + +  A +++         G +  +    +  PE+ +    +L S  +  
Sbjct: 194 IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASF 253
Query: 232 VSGHNLVVDGGFAIVNAGFSV 252
           ++G ++ VDGG ++    + V
Sbjct: 254 ITGQSVDVDGGRSLYTHSYEV 274

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 31/259 (11%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+GKVAL+TG  RGIG   A    + G KV++        ES  + +            V
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST--ESAEEVVAAIKKNGSDAACV 84
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             +V   +DI      AV  +GKLDI+ +N+G V     ++ D    EF+R+ +IN  G 
Sbjct: 85  KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS--FGHVKDVTPEEFDRVFTINTRGQ 142
Query: 130 FL------------GRNMLLG-VCGIIGGAATHA-YTSSKHGLLGLMKNTAVELGRFGIR 175
           F             GR +L+G + G       HA Y+ SK  +    +  A+++    I 
Sbjct: 143 FFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKIT 202
Query: 176 VNCVSPYAVSTPL----AKDFL--------KLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
           VN V+P  + T +     ++++        +  D+     +S L+   L P D A    +
Sbjct: 203 VNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGL-PIDIARVVCF 261
Query: 224 LGSDESKCVSGHNLVVDGG 242
           L S++   V+G  + +DGG
Sbjct: 262 LASNDGGWVTGKVIGIDGG 280

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 109/267 (40%), Gaps = 59/267 (22%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKV-------------LIADIKDDLGESVCKDIXXX 59
            V L+TGG+RGIG    RL ++ G +V             ++A I +  GE+V       
Sbjct: 27  PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVA------ 80
Query: 60  XXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-F 118
                    +  DV    DI    +    Q+G+LD + NNAG VD   P  +D    E  
Sbjct: 81  ---------IPGDVGNAADIAAXFSAVDRQFGRLDGLVNNAGIVD--YPQRVDEXSVERI 129
Query: 119 ERILSINLVGAFL--------GRNMLLGVCG----------IIGGAATHA-YTSSKHGL- 158
           ER L +N+ G+ L           +  G  G          I+G A  +  Y +SK  + 
Sbjct: 130 ERXLRVNVTGSILCAAEAVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAID 189
Query: 159 ---LGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPE 215
              +GL +  A E    GIRVN V P  + T L      L D       S        PE
Sbjct: 190 TFTIGLAREVAAE----GIRVNAVRPGIIETDLHASG-GLPDRAREXAPSVPXQRAGXPE 244
Query: 216 DAAEAALYLGSDESKCVSGHNLVVDGG 242
           + A+A LYL S  +  V+G  L V GG
Sbjct: 245 EVADAILYLLSPSASYVTGSILNVSGG 271

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 112/253 (44%), Gaps = 41/253 (16%)
Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXX 66
           +  L G+VA++TG +RGIG   AR     GA+V++     +   +V ++I          
Sbjct: 24  MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESH 83
Query: 67  XYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGT------VDEVKPNILDNDQAEFER 120
               CD++    I       +  +G+ D++ NNAG       +  +KP       AE++ 
Sbjct: 84  A---CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKP-------AEWDA 133
Query: 121 ILSINLVGAFL------------GRNMLLGVCGIIGG---AATHAYTSSKHGLLGLMKNT 165
           ++++NL   +L             R  ++ +  + G    A   AYT+SK GL GLM + 
Sbjct: 134 LIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSA 193
Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG 225
           A EL +  +RV+ V+P +V T            GL    S L GA+ EP+D A+    L 
Sbjct: 194 AEELRQHQVRVSLVAPGSVRTEFGV--------GLSAKKSAL-GAI-EPDDIADVVALLA 243
Query: 226 SDESKCVSGHNLV 238
           +   +      LV
Sbjct: 244 TQADQSFISEVLV 256

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 113/263 (42%), Gaps = 37/263 (14%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           + GKVA+ITG + GIG   A  F+K GA  VL+A   D L E+                 
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARS---LKEKFGVRVLE 61
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  DV   + ++  V +  + +G  DI+ NNAGT       I++    +++    ++++ 
Sbjct: 62  VAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGS--NETIMEAADEKWQFYWELHVMA 119
Query: 129 AF-LGRNMLLGVCGIIGGAATH--------------AYTSSKHGLLGLMKNTAVELGRFG 173
           A  L R ++ G+    GGA  H               Y  +K  L+   K  A E+ +  
Sbjct: 120 AVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDN 179
Query: 174 IRVNCVSPYAVSTPLAKDFLK----LADDGLGGMYSNLKGAVLE---------PEDAAEA 220
           IRVNC++P  + TP   D++K    L  D  G     L+    E         PE+ A  
Sbjct: 180 IRVNCINPGLILTP---DWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANF 236
Query: 221 ALYLGSDESKCVSGHNLVVDGGF 243
            ++L S+ +    G    VDGG 
Sbjct: 237 FVFLCSERATYSVGSAYFVDGGM 259

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 115/255 (45%), Gaps = 30/255 (11%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKV-LIADIKDDLGESVCKDIXXXXXXXXXXXYVHC 71
            VALITG   GIG  TA   +  G  V  +   + ++ E V  +I            +  
Sbjct: 29  PVALITGAGSGIGRATALALAADGVTVGALGRTRTEV-EEVADEIVGAGGQAIA---LEA 84
Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           DV+ E    NAV   V ++G LDI+  NAG ++ V   I D    E++  +++NL G FL
Sbjct: 85  DVSDELQXRNAVRDLVLKFGHLDIVVANAG-INGVWAPIDDLKPFEWDETIAVNLRGTFL 143
Query: 132 GRNMLLGVCGIIGGAA---------THAYTSS--------KHGLLGLMKNTAVELGRFGI 174
             ++ +      GG A         T  +T+         K   + +++  A+ELG+  I
Sbjct: 144 TLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHI 203
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----EP---EDAAEAALYLGSD 227
           RVN V P A+ T ++ +     ++         KG V     +P   ED AE   +L S+
Sbjct: 204 RVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSE 263
Query: 228 ESKCVSGHNLVVDGG 242
            ++ V+G  + +DGG
Sbjct: 264 RARHVTGSPVWIDGG 278

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 115/263 (43%), Gaps = 47/263 (17%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLI--------AD-IKDDLGESVCKDIXXX 59
           +  GK  LITG ++GIG   A+  +  G KV I        AD +K++L E   K     
Sbjct: 26  QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYK----- 80
Query: 60  XXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTV-DEVKPNILDNDQAEF 118
                    +  D   E D   A+ T V   G L  + NNAG V D++   +   D   F
Sbjct: 81  ------AAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTED---F 131
Query: 119 ERILSINLVGAFLG-RNML-----------LGVCGII---GGAATHAYTSSKHGLLGLMK 163
             ++  NL  AF+G R  L           + V  II   G      Y++SK G++ + K
Sbjct: 132 HHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSK 191
Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLA---KDFLKLADDGLGGMYSNLKGAVLEPEDAAEA 220
           + A E     IR N V+P  + T +    KD LK   D +  +  N  G+    ++ AEA
Sbjct: 192 SFAYEGALRNIRFNSVTPGFIETDMNANLKDELKA--DYVKNIPLNRLGS---AKEVAEA 246
Query: 221 ALYLGSDESKCVSGHNLVVDGGF 243
             +L SD S  ++G  L V+GG 
Sbjct: 247 VAFLLSDHSSYITGETLKVNGGL 269

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 16  LITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTK 75
           L+TGG RGIG   A+  +  G KV +       G    K +            V CDVT 
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVTH----RGSGAPKGLFG----------VECDVTD 64
Query: 76  EKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAF---- 130
              ++ A        G ++++ +NAG + D     ++   + +FE++++ NL GAF    
Sbjct: 65  SDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF---LMRMTEEKFEKVINANLTGAFRVAQ 121
Query: 131 ----------LGRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCV 179
                      GR + +G V G  G      Y +SK G++G+ ++ A EL +  +  N V
Sbjct: 122 RASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVV 181
Query: 180 SPYAVSTPLAKDFLKLADDGL--GGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNL 237
           +P  + T    D  +  D+ +  G +       V  P + A    +L S+++  +SG  +
Sbjct: 182 APGYIDT----DMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVI 237
Query: 238 VVDGGFAI 245
            VDGG  +
Sbjct: 238 PVDGGMGM 245

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 20/256 (7%)
Query: 3   ANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXX 62
           +N ++  L G+ AL+TG +RG+G   A   +  GA++LI          V + +      
Sbjct: 17  SNQIIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDP---SRVAQTVQEFRNV 73
Query: 63  XXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL 122
                 V  DVT E +I  A      Q   +DI+ NNAG   + +  +++ + A+++R++
Sbjct: 74  GHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGI--QFRKPMIELETADWQRVI 131
Query: 123 SINLVGAFL-----GRNMLLGVCGII----------GGAATHAYTSSKHGLLGLMKNTAV 167
             NL  AF+      + M+    G I            A    YT +K G+  L +  A 
Sbjct: 132 DTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAA 191
Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD 227
           E  ++GI+ N + P  + T + +  +   +               +P++    A++L + 
Sbjct: 192 EWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSAS 251
Query: 228 ESKCVSGHNLVVDGGF 243
            S  V+G  + VDGG 
Sbjct: 252 ASDYVNGQIIYVDGGM 267

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 16  LITGGARGIGECTARLFSKHGAKV-LIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVT 74
           LITG +RGIGE TARL    G +V L+A  +D+      K +            +  DV 
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLMA--RDE------KRLQALAAELEGALPLPGDVR 60
Query: 75  KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG-R 133
           +E D   AV      +G+L  + NNAG V  +KP + +    E+  +L  NL GAFLG R
Sbjct: 61  EEGDWARAVAAMEEAFGELSALVNNAG-VGVMKP-VHELTLEEWRLVLDTNLTGAFLGIR 118
Query: 134 NMLLGVCGIIGGAATH--------------AYTSSKHGLLGLMKNTAVELGRFGIRVNCV 179
           + +  +    GG   +              AY +SK GLLGL     ++L    +RV  V
Sbjct: 119 HAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNV 178
Query: 180 SPYAVSTPLAKDFLKLADDGLGGMYSNLKGAV--LEPEDAAEAALYLGSDESKCVSGHNL 237
            P +V T               G   N  G    L+PED A+A L+     +  + GH +
Sbjct: 179 LPGSVDT---------------GFAGNTPGQAWKLKPEDVAQAVLF-----ALEMPGHAM 218
Query: 238 VVD 240
           V +
Sbjct: 219 VSE 221

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 110/263 (41%), Gaps = 37/263 (14%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           + GKVA+ITG + GIG   A  F+K GA  VL+A   D L E+                 
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARS---LKEKFGVRVLE 61
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGT-VDEVKPNILDNDQAEFERILSINLV 127
           V  DV   + ++  V +  + +G  DI+ NNAGT  +E      D     +  +L +  V
Sbjct: 62  VAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAV 121
Query: 128 GAFLGRNMLLGVCGIIGGAATH--------------AYTSSKHGLLGLMKNTAVELGRFG 173
              L R ++ G+    GGA  H               Y  +K  L+   K  A E+ +  
Sbjct: 122 R--LARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDN 179
Query: 174 IRVNCVSPYAVSTPLAKDFLK----LADDGLGGMYSNLKGAVLE---------PEDAAEA 220
           IRVNC++P  + TP   D++K    L  D  G     L+    E         PE+ A  
Sbjct: 180 IRVNCINPGLILTP---DWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANF 236
Query: 221 ALYLGSDESKCVSGHNLVVDGGF 243
            ++L S+ +    G    VDGG 
Sbjct: 237 FVFLCSERATYSVGSAYFVDGGM 259

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 39/219 (17%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           ++  VA++TGGA G+G  T +     GA+V++ DI+   GE V  D+           + 
Sbjct: 7   IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADL------GDRARFA 57
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDND----QAEFERILSIN 125
             DVT E  + +A++ A T  G L I+ N AGT + ++  +L  D     A F +I+ IN
Sbjct: 58  AADVTDEAAVASALDLAET-MGTLRIVVNCAGTGNAIR--VLSRDGVFSLAAFRKIVDIN 114
Query: 126 LVGAF---------------LGRNM--------LLGVCGIIGGAATHAYTSSKHGLLGLM 162
           LVG+F               +G N            V    G     AY++SK G++G+ 
Sbjct: 115 LVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMT 174
Query: 163 KNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG 201
              A +L    IRV  ++P    TPL     + A   LG
Sbjct: 175 LPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLG 213

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 32/260 (12%)
Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
            +L+GK  LITGG  GIG   +  F+K GA + IA + ++   +  K             
Sbjct: 43  EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG------ 96
Query: 68  YVHC-----DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-FERI 121
            V C     D++ E+  ++ V   V Q G L+I+ NN     +     L+   AE  E+ 
Sbjct: 97  -VKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVA--QQYPQQGLEYITAEQLEKT 153
Query: 122 LSINLVGAF---------LGR-NMLLGVCGII---GGAATHAYTSSKHGLLGLMKNTAVE 168
             IN+   F         L + ++++    I+   G      Y+++K  ++   ++ +  
Sbjct: 154 FRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQS 213
Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSD 227
           L + GIRVN V+P  + TPL        +  +    SN+      +P + A A +YL S 
Sbjct: 214 LVQKGIRVNGVAPGPIWTPLIPS--SFDEKKVSQFGSNVPXQRPGQPYELAPAYVYLASS 271
Query: 228 ESKCVSGHNLVVDGGFAIVN 247
           +S  V+G  + V+GG  IVN
Sbjct: 272 DSSYVTGQXIHVNGG-VIVN 290

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 23/251 (9%)
Query: 15  ALITGGARGIG-ECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDV 73
           ALIT G +G+G + T +L +K G  V +    D       K+            +V  DV
Sbjct: 10  ALITAGTKGLGKQVTEKLLAK-GYSVTVTYHSDTTAMETMKE--TYKDVEERLQFVQADV 66
Query: 74  TKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF--- 130
           TK++D+   V  A++ +GK+D + NNAG     +  ++D ++ E+  ++  NL   F   
Sbjct: 67  TKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLL 126
Query: 131 -----------LGRNMLLGVCG---IIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV 176
                       GR +  G  G     G     A+ ++K GL+ L K  A E   +GI  
Sbjct: 127 KLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITA 186
Query: 177 NCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHN 236
           N V P  +   + +  ++ A       ++   G     ED A    +L  D+S  ++G  
Sbjct: 187 NMVCPGDIIGEMKEATIQEARQ--LKEHNTPIGRSGTGEDIARTISFLCEDDSDMITGTI 244
Query: 237 LVVDGGFAIVN 247
           + V G   +++
Sbjct: 245 IEVTGAVDVIH 255

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 109/250 (43%), Gaps = 26/250 (10%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L  KVAL+TG +RGIG   A   +  GA V+         E                   
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLN 62
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVG 128
             D+   + I+N       +   +DI+ NNAG T D +     ++   E++ +++ NL  
Sbjct: 63  ISDI---ESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSED---EWQSVINTNLSS 116
Query: 129 AF--------------LGRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F               GR + +G V G  G      Y ++K G++G  K+ A E+    
Sbjct: 117 IFRXSKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRN 176
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSDESKCV 232
           I VN V+P  ++T       KL D+    + + +  G + EP+D A A  +L S+E+K +
Sbjct: 177 ITVNVVAPGFIATDXTD---KLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYI 233
Query: 233 SGHNLVVDGG 242
           +G  L V+GG
Sbjct: 234 TGQTLHVNGG 243

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 108/249 (43%), Gaps = 37/249 (14%)
Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHC 71
           G+  L+TGG+ GIG   A  F++ GA+V+   +  D G    +               H 
Sbjct: 11  GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDAD-GVHAPR---------------HP 54
Query: 72  DVTKEK-DIENA--VNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
            + +E+ DI ++  +        +LD++ NNAG   + +    + D A FER+L +NL  
Sbjct: 55  RIRREELDITDSQRLQRLFEALPRLDVLVNNAGISRDRE----EYDLATFERVLRLNLSA 110
Query: 129 AFLG----RNMLLGVCGII----------GGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           A L     R +L    G I          G A   AY++SK  ++ L ++ A E     I
Sbjct: 111 AMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERI 170
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG 234
           RVN ++P  + TPL        +     M         E  + A AA +L    +  V+G
Sbjct: 171 RVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTG 230
Query: 235 HNLVVDGGF 243
             L VDGG+
Sbjct: 231 AVLAVDGGY 239

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 16  LITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTK 75
           L+TGG RGIG   A+  +  G KV +       G    K +            V  DVT 
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVT----HRGSGAPKGLFG----------VEVDVTD 64
Query: 76  EKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAF---- 130
              ++ A        G ++++ +NAG + D     ++   + +FE++++ NL GAF    
Sbjct: 65  SDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF---LMRMTEEKFEKVINANLTGAFRVAQ 121
Query: 131 ----------LGRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCV 179
                      GR + +G V G+ G      Y +SK G++G+ ++ A EL +  +  N V
Sbjct: 122 RASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVV 181
Query: 180 SPYAVSTPLAKDFLKLADDGL--GGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNL 237
           +P  + T    D  +  D+ +  G +       V  P + A    +L S+++  +SG  +
Sbjct: 182 APGYIDT----DMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVI 237
Query: 238 VVDGGFAI 245
            VDGG  +
Sbjct: 238 PVDGGMGM 245

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 38/263 (14%)
Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
            +L+GK  LITGG  GIG   +  F+K GA + IA + ++   +  K             
Sbjct: 43  EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG------ 96
Query: 68  YVHC-----DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-FERI 121
            V C     D++ E+  ++ V   V Q G L+I+ NN     +     L+   AE  E+ 
Sbjct: 97  -VKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVA--QQYPQQGLEYITAEQLEKT 153
Query: 122 LSINLVGAF---------LGR-NMLLGVCGII---GGAATHAYTSSKHGLLGLMKNTAVE 168
             IN+   F         L + ++++    I+   G      Y+++K  ++   ++ +  
Sbjct: 154 FRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQS 213
Query: 169 LGRFGIRVNCVSPYAVSTPLAK---DFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYL 224
           L + GIRVN V+P  + TPL     D  K++  G     SN+      +P + A A +YL
Sbjct: 214 LVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFG-----SNVPMQRPGQPYELAPAYVYL 268
Query: 225 GSDESKCVSGHNLVVDGGFAIVN 247
            S +S  V+G  + V+GG  IVN
Sbjct: 269 ASSDSSYVTGQMIHVNGG-VIVN 290

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 113/250 (45%), Gaps = 24/250 (9%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           LQGKVAL+TG +RGIG+  A    + GA V+         E + + +            +
Sbjct: 25  LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAG---L 81
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINL-- 126
             DV+ ++ +   +       G+  I+ NNAG T D +   + D+   E+  +++ NL  
Sbjct: 82  VLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDD---EWFDVVNTNLNS 138
Query: 127 ------------VGAFLGRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
                         A  GR + +G V G +G A    Y ++K GL G  +  A E+G   
Sbjct: 139 LYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRA 198
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS 233
           I VN V+P  + T + ++  +   + L G      G + + E+ A+   +L SD +  V+
Sbjct: 199 ITVNAVAPGFIDTDMTRELPEAQREALLGQIP--LGRLGQAEEIAKVVGFLASDGAAYVT 256
Query: 234 GHNLVVDGGF 243
           G  + V+GG 
Sbjct: 257 GATVPVNGGM 266

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 22/247 (8%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           + ALITG +RGIG   A   ++ G  + I     +  ++                 +  +
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAI-HYGQNREKAEEVAEEARRRGSPLVAVLGAN 60
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAF- 130
           + + +     V+ A    G LD + NNAG T D +   + D D   +E +L  NL   F 
Sbjct: 61  LLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDED---WEAVLEANLSAVFR 117
Query: 131 -------------LGRNM-LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV 176
                         GR + +  V GI+G      Y +SK GL+G  +  A E  + GI V
Sbjct: 118 TTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITV 177
Query: 177 NCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHN 236
           N V+P  + T + +   +   +    +     G    PE+ AEA  +L S+++  ++G  
Sbjct: 178 NAVAPGFIETEMTERLPQEVKEAY--LKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQT 235
Query: 237 LVVDGGF 243
           L VDGG 
Sbjct: 236 LCVDGGL 242

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 124/269 (46%), Gaps = 52/269 (19%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIA--DIKD------DLGESVCKDIXXXX 60
           RL GK ALITG  +GIG   AR F+  GA+++++  D+ +       LGE    D+    
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHT-- 74
Query: 61  XXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFER 120
                   V  D+ +          A   +G LD++ NNAG +   +P ++D D   F+ 
Sbjct: 75  --------VAIDLAEPDAPAELARRAAEAFGGLDVLVNNAG-ISHPQP-VVDTDPQLFDA 124
Query: 121 ILSIN-----LVGAFLGRNMLLGVCGIIGGAAT--------------HAYTSSKHGLLGL 161
            +++N     L+ + +G+ M   V    GGA                +AY +SK GL+  
Sbjct: 125 TIAVNLRAPALLASAVGKAM---VAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMA 181
Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLAK----DFLKLADDGLGGMYSNLK-GAVLEPED 216
            K  A ELG  GIR N V P  V T + +    D  K A      M + +  G    P +
Sbjct: 182 TKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAP-----MIARIPLGRFAVPHE 236
Query: 217 AAEAALYLGSDESKCVSGHNLVVDGGFAI 245
            ++A ++L SD +  ++G ++ VDGG+ +
Sbjct: 237 VSDAVVWLASDAASMINGVDIPVDGGYTM 265

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 37/206 (17%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           +L+ +V ++TG + G+G    R  ++ GA VL  D+K   GE    ++           +
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRXLAQEGATVLGLDLKPPAGEEPAAEL------GAAVRF 57
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVK------PNILDNDQAEFERIL 122
            + DVT E D   A+  A  ++G +  + N AGT    K      P+ LD+    F R +
Sbjct: 58  RNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDS----FARTV 113
Query: 123 SINLVGAF-----------LGRNMLLGVCGII----------GGAATHAYTSSKHGLLGL 161
           ++NL+G F            G     G  G+I          G     AY +SK G+  L
Sbjct: 114 AVNLIGTFNXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAAL 173
Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTP 187
               A EL RFGIRV  ++P    TP
Sbjct: 174 TLPAARELARFGIRVVTIAPGIFDTP 199

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
            L    G+ A++TGGA GIG  TA  F++ GA+++++D+     E     +         
Sbjct: 25  FLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHG 84
Query: 66  XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              V CDV    ++    + A    G +D++F+NAG V  V   +   +  ++  ++ I+
Sbjct: 85  ---VVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIV--VAGPLAQMNHDDWRWVIDID 139
Query: 126 LVG------AFLGRNMLLGVCGIIGGAATHA----------YTSSKHGLLGLMKNTAVEL 169
           L G      AFL R +  G  G I   A+ A          Y  +K+G++GL +  A E+
Sbjct: 140 LWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREV 199
Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKL--ADDGL 200
              GI V+ + P  V T L  +  ++  AD G+
Sbjct: 200 KPNGIGVSVLCPMVVETKLVSNSERIRGADYGM 232

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 120/249 (48%), Gaps = 25/249 (10%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIXXXXXXXXXXXYVHC 71
           KV +ITGG+ G G+  A  F+K GA+V+I    K+ L E+  +              V  
Sbjct: 7   KVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLE----IEQFPGQILTVQX 62
Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF- 130
           DV    DI+  +     ++G++DI+ NNA   + + P   D     +  +++I L G F 
Sbjct: 63  DVRNTDDIQKXIEQIDEKFGRIDILINNAAG-NFICP-AEDLSVNGWNSVINIVLNGTFY 120
Query: 131 ----LGRNML-LGVCG-IIGGAATHAY---------TSSKHGLLGLMKNTAVELGR-FGI 174
               +G+  +  G+ G II   AT+A+          ++K G+L   K  AVE GR +GI
Sbjct: 121 CSQAIGKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGI 180
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKCVS 233
           RVN ++P  +      D L ++++       ++  G +  PE+ A  A YL SDE+  ++
Sbjct: 181 RVNAIAPGPIERTGGADKLWISEEXAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYIN 240
Query: 234 GHNLVVDGG 242
           G     DGG
Sbjct: 241 GTCXTXDGG 249

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 111/245 (45%), Gaps = 38/245 (15%)
Query: 7   LRRLQGKVALITGGARGIGECTARLFSKHGAKVL-----IADIKDDLGESVCKDIXXXXX 61
           + R + ++AL+TG + GIG   AR   + G KV+     + +I++   E  CK       
Sbjct: 27  MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAE--CKSAGYPGT 84
Query: 62  XXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPN-ILDNDQAEFER 120
                    CD++ E+DI +  +   +Q+  +DI  NNAG     +P+ +L    + ++ 
Sbjct: 85  LIP----YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL---ARPDTLLSGSTSGWKD 137
Query: 121 ILSINLVG----------AFLGRNM----LLGVCGIIGG-----AATHAYTSSKHGLLGL 161
           + ++N++           +   RN+    ++ +  + G      + TH Y+++K+ +  L
Sbjct: 138 MFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTAL 197
Query: 162 MKNTAVEL--GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAE 219
            +    EL   +  IR  C+SP  V T  A        +     Y  +K   L+PED AE
Sbjct: 198 TEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMK--CLKPEDVAE 255
Query: 220 AALYL 224
           A +Y+
Sbjct: 256 AVIYV 260

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 113/265 (42%), Gaps = 59/265 (22%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKV---------LIADIKDDLG-ESVCKDIXXX 59
             G  AL+TG  +GIG  T +     GAKV         L++  K+  G E VC D+   
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW 64
Query: 60  XXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFE 119
                                +A   A+   G +D++ NNA  V  +    L+  +  F+
Sbjct: 65  ---------------------DATEKALGGIGPVDLLVNNAALV--IMQPFLEVTKEAFD 101
Query: 120 RILSINLVGAF-----LGRNML-LGVCGIIGGAATH----------AYTSSKHGLLGLMK 163
           R  S+NL   F     + R+M+  GV G I   ++            Y+S+K  +  L K
Sbjct: 102 RSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTK 161
Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG-----LGGMYSNLKGAVLEPEDAA 218
             A+ELG   IRVN V+P  V T + K   K++ D      L   +   K A  E ED  
Sbjct: 162 AMAMELGPHKIRVNSVNPTVVLTDMGK---KVSADPEFARKLKERHPLRKFA--EVEDVV 216
Query: 219 EAALYLGSDESKCVSGHNLVVDGGF 243
            + L+L SD S   SG  ++VD G+
Sbjct: 217 NSILFLLSDRSASTSGGGILVDAGY 241

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 39/248 (15%)
Query: 16  LITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTK 75
           L+TGG RGIG   A+  +  G KV +       G    K +            V  DVT 
Sbjct: 39  LVTGGNRGIGLAIAQRLAADGHKVAVT----HRGSGAPKGLFG----------VEVDVTD 84
Query: 76  EKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAF---- 130
              ++ A        G ++++ +NAG + D     ++   + +FE++++ NL GAF    
Sbjct: 85  SDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF---LMRMTEEKFEKVINANLTGAFRVAQ 141
Query: 131 ----------LGRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCV 179
                      GR + +  V G+ G      Y +SK G++G+ ++ A EL +  +  N V
Sbjct: 142 RASRSMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVV 201
Query: 180 SPYAVSTPLAKDFLKLADDGL--GGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNL 237
           +P  + T    D  +  D+ +  G +       V  P + A    +L S+++  +SG  +
Sbjct: 202 APGYIDT----DMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVI 257
Query: 238 VVDGGFAI 245
            VDGG  +
Sbjct: 258 PVDGGMGM 265

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 107/260 (41%), Gaps = 49/260 (18%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVL-IADIKDDLG---------ESVCKDIXXX 59
           L G+  L+TG  +GIG  T +     GA+V+ ++  + DL          E VC D+   
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLG-- 62
Query: 60  XXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFE 119
                             D E A   A+   G +D++ NNA  V  ++P  L+  +  F+
Sbjct: 63  ------------------DWE-ATERALGSVGPVDLLVNNAA-VALLQP-FLEVTKEAFD 101
Query: 120 RILSINL-----VGAFLGRNMLL-GVCGIIGGAATH----------AYTSSKHGLLGLMK 163
           R   +NL     V   + R ++  GV G I   ++            Y S+K  L  L K
Sbjct: 102 RSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTK 161
Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
             A+ELG   IRVN V+P  V T + +            +     G   E E    A L+
Sbjct: 162 VMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILF 221
Query: 224 LGSDESKCVSGHNLVVDGGF 243
           L SD S   +G  L V+GGF
Sbjct: 222 LLSDRSGMTTGSTLPVEGGF 241

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 107/260 (41%), Gaps = 49/260 (18%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVL-IADIKDDLG---------ESVCKDIXXX 59
           L G+  L+TG  +GIG  T +     GA+V+ ++  + DL          E VC D+   
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLG-- 62
Query: 60  XXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFE 119
                             D E A   A+   G +D++ NNA  V  ++P  L+  +  F+
Sbjct: 63  ------------------DWE-ATERALGSVGPVDLLVNNAA-VALLQP-FLEVTKEAFD 101
Query: 120 RILSINL-----VGAFLGRNMLL-GVCGIIGGAATH----------AYTSSKHGLLGLMK 163
           R   +NL     V   + R ++  GV G I   ++            Y S+K  L  L K
Sbjct: 102 RSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTK 161
Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
             A+ELG   IRVN V+P  V T + +            +     G   E E    A L+
Sbjct: 162 VMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILF 221
Query: 224 LGSDESKCVSGHNLVVDGGF 243
           L SD S   +G  L V+GGF
Sbjct: 222 LLSDRSGMTTGSTLPVEGGF 241

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 108/266 (40%), Gaps = 39/266 (14%)
Query: 4   NLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD-LGESVCKDIXXXXXX 62
           NL  +    KV LITGG+RGIG  +A L ++ G  V +    +    + V + I      
Sbjct: 17  NLYFQSXLSKVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQ 76
Query: 63  XXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-FERI 121
                 V  DV KE+++     T   Q G+L  + NNAG VD+     +D    E  +R 
Sbjct: 77  ALA---VQADVAKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTR--VDGITLERLQRX 131
Query: 122 LSINLVGAFL-GRNMLLGVCGIIGGAATHA------------------YTSSKHGL---- 158
             IN+ G+FL  R  +       GG+                      Y ++K  +    
Sbjct: 132 FEINVFGSFLCAREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFT 191
Query: 159 LGLMKNTAVELGRFGIRVNCVSPYAVSTPL--AKDFLKLADDGLGGMYSNLKGAVLEPED 216
           LGL K  A E    GIRVN V P  + T +  +      A D    +     G   E   
Sbjct: 192 LGLAKEVATE----GIRVNAVRPGIIETDIHASGGLPNRARDVAPQVPXQRAGTARE--- 244
Query: 217 AAEAALYLGSDESKCVSGHNLVVDGG 242
            AEA ++L  D++   +G  L V GG
Sbjct: 245 VAEAIVWLLGDQASYTTGALLDVTGG 270

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 112/263 (42%), Gaps = 34/263 (12%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLI--ADIKDDLGESVCKDIXXXXXXXXXX 66
           RL GKVAL+TG  RGIG   A    + GAKV++  A+   D  E V  +I          
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKD-AEKVVSEIKALGSDAIA- 72
Query: 67  XYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
             +  D+ +  +I    + AV  +G LDI  +N+G V     ++ D  + EF+R+ S+N 
Sbjct: 73  --IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS--FGHLKDVTEEEFDRVFSLNT 128
Query: 127 VGAFL-----GRNMLLGVCGIIGGAAT--------HA-YTSSKHGLLGLMKNTAVELGRF 172
            G F       R++  G   ++  + T        H+ Y+ SK  +   ++  + + G  
Sbjct: 129 RGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDK 188
Query: 173 GIRVNCVSPYAVST-----------PLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAA 221
            I VN V+P    T           P    +       +    S L      P+D A   
Sbjct: 189 KITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGW-PQDVANVV 247
Query: 222 LYLGSDESKCVSGHNLVVDGGFA 244
            +L S E + V+G  L +DGG A
Sbjct: 248 GFLVSKEGEWVNGKVLTLDGGAA 270

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 22/195 (11%)
Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
           Y+  ++  +    +AV   +  +G+LD + NNAG  D +    LD  +  F   L  NL+
Sbjct: 59  YLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIG---LDAGRDAFVASLERNLI 115
Query: 128 GAFL-----------GRNMLLGV---CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
             +             R  ++ +     + G   T  Y +SK   L L +  AV L   G
Sbjct: 116 HYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALREHG 175
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYS-----NLKGAVLEPEDAAEAALYLGSDE 228
           +RVN V P  V TPL ++++   +D    +        L      P++ A+ A++L S  
Sbjct: 176 VRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPR 235
Query: 229 SKCVSGHNLVVDGGF 243
           +   +G  L VDGG+
Sbjct: 236 ASHTTGEWLFVDGGY 250

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 110/263 (41%), Gaps = 34/263 (12%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLI--ADIKDDLGESVCKDIXXXXXXXXXX 66
           RL GKVAL+TG  RGIG   A    + GAKV++  A+   D  E V  +I          
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKD-AEKVVSEIKALGSDAIA- 72
Query: 67  XYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
             +  D+ +  +I    + AV  +G LDI  +N+G V     ++ D  + EF+R+ S+N 
Sbjct: 73  --IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS--FGHLKDVTEEEFDRVFSLNT 128
Query: 127 VGAFL-----GRNMLLGVCGIIGGAATHA-YTSSKHGLL--------GLMKNTAVELGRF 172
            G F       R++  G   ++  + T   ++  KH L           ++  + + G  
Sbjct: 129 RGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDK 188
Query: 173 GIRVNCVSPYAVST-----------PLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAA 221
            I VN V+P    T           P    +       +    S L      P+D A   
Sbjct: 189 KITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGW-PQDVANVV 247
Query: 222 LYLGSDESKCVSGHNLVVDGGFA 244
            +L S E + V+G  L +DGG A
Sbjct: 248 GFLVSKEGEWVNGKVLTLDGGAA 270

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 22/196 (11%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADI----KDDLGESVCKDIXXXXXXXX 64
           R  G+VA++TG   G+G   A LF++ GAKV++ D+      D       DI        
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA 75
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
               V  D     D    + TA+  +G++DI+ NNAG + +   +++   + ++  +  +
Sbjct: 76  GGEAV-ADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRD--RSLVKTSEQDWNLVNDV 132
Query: 125 NLVGAF--------------LGRNMLLGV-CGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           +L G+F               GR ++     GI G      YT++K GL+GL    A+E 
Sbjct: 133 HLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEG 192
Query: 170 GRFGIRVNCVSPYAVS 185
            R  +  N + P A S
Sbjct: 193 ARNNVLCNVIVPTAAS 208

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 25/254 (9%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           RL G  A +TG   GIG    R F+  GA++++ D      E+   D             
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILID-----REAAALDRAAQELGAAVAAR 62
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  DVT + +   A          + I+ N+AG       + L+ D A + +++++N+ G
Sbjct: 63  IVADVT-DAEAMTAAAAEAEAVAPVSILVNSAGIAR--LHDALETDDATWRQVMAVNVDG 119
Query: 129 AF-----LGRNMLLGVCGIIGGAAT------------HAYTSSKHGLLGLMKNTAVELGR 171
            F      GR M+    G I    +             +Y +SK  +  L +  A E   
Sbjct: 120 MFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAG 179
Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC 231
            G+RVN ++P  V+T +     +  +     +     G   EP + A AAL+L S  +  
Sbjct: 180 RGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASY 239
Query: 232 VSGHNLVVDGGFAI 245
           V+G  L VDGG+ +
Sbjct: 240 VTGAILAVDGGYTV 253

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           R Q KV +ITG ++GIG    R +     +V+       +  S   DI            
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVAT--SRSIKPSADPDIHT---------- 72
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  D++K +  +  V   + ++G++D + NNAG V   KP  ++  Q +++  L +N+ G
Sbjct: 73  VAGDISKPETADRIVREGIERFGRIDSLVNNAG-VFLAKP-FVEXTQEDYDHNLGVNVAG 130
Query: 129 AF------LGRNMLLGVCGIIG-----------GAATHAYTSSKHGLLGLMKNTAVELGR 171
            F          +  G   I+            G  +   + +K GL  + ++ A E  R
Sbjct: 131 FFHITQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLAXEFSR 190
Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC 231
            G+RVN VSP  + TP            L G++    G   E  D  +A LYL  + +  
Sbjct: 191 SGVRVNAVSPGVIKTPXHP---AETHSTLAGLHP--VGRXGEIRDVVDAVLYL--EHAGF 243
Query: 232 VSGHNLVVDGG 242
           ++G  L VDGG
Sbjct: 244 ITGEILHVDGG 254

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 46/241 (19%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-----GESVCKDIXXXXXXX 63
           R  G+V L+TG   G+G   A  F++ GA V++ D+  D      G      +       
Sbjct: 27  RFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRR 86
Query: 64  XXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTV-DEVKPNILDNDQAEFERIL 122
                 + D  +E   E  V TA+  +G++D++ NNAG + D     I D D   ++ I 
Sbjct: 87  GGKAVANYDSVEEG--EKVVKTALDAFGRIDVVVNNAGILRDRSFARISDED---WDIIH 141
Query: 123 SINLVGAF--------------LGRNMLL-GVCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
            ++L G+F               GR ++     GI G      Y+++K GLLGL  + A+
Sbjct: 142 RVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAI 201
Query: 168 ELGRFGIRVNCVSPYA----VSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
           E  +  I  N ++P A      T + +D ++                 L+PE  A   L+
Sbjct: 202 EGRKSNIHCNTIAPNAGSRMTQTVMPEDLVE----------------ALKPEYVAPLVLW 245
Query: 224 L 224
           L
Sbjct: 246 L 246

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 40/233 (17%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDD------LGESVCKDIXXXXXXXXXX 66
           K+ +ITG + GIGE  AR FS+ G  +L+   + +      L  ++C  +          
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQV---------- 66
Query: 67  XYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
                DVT +   + A+  A   YG  D + NNAG +  +   I   +  E++R+  +N+
Sbjct: 67  -----DVTDKYTFDTAITRAEKIYGPADAIVNNAGMM--LLGQIDTQEANEWQRMFDVNV 119
Query: 127 VGAFLGRNMLLGV-----CGI------IGGAATH----AYTSSKHGLLGLMKNTAVELGR 171
           +G   G   +L       CG       I G  T     AY  +K  +  + +N   E+  
Sbjct: 120 LGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAA 179
Query: 172 FGIRVNCVSPYAVSTP-LAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
             +RV  ++P AV T  L+    +   DG      ++ G VL  +D A A L+
Sbjct: 180 SNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDM-GGVLAADDVARAVLF 231

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 96/243 (39%), Gaps = 41/243 (16%)
Query: 2   HANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESV--CKDIXX 58
           H     + + G++ LITG   GIG  TA  F+K  +K+++ DI K  L E+   CK +  
Sbjct: 21  HMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA 80
Query: 59  XXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEF 118
                        D +  +DI ++      + G + I+ NNAG V     ++      + 
Sbjct: 81  KVHTFV------VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVV--YTSDLFATQDPQI 132
Query: 119 ERILSINLVGAFLGRNMLL--------GVCGIIGGAATH-------AYTSSKHGLLGLMK 163
           E+   +N++  F      L        G    +  AA H       AY SSK   +G  K
Sbjct: 133 EKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHK 192
Query: 164 NTAVELGRF---GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEA 220
               EL      G++  C+ P  V+T     F+K     L        G  LEPE+    
Sbjct: 193 TLTDELAALQITGVKTTCLCPNFVNT----GFIKNPSTSL--------GPTLEPEEVVNR 240
Query: 221 ALY 223
            ++
Sbjct: 241 LMH 243

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 25/255 (9%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L  KV +I+G    +G   AR  ++ GA +++A    +  E V K +            V
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALS---V 65
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKP---NILDN--DQAEFERILSI 124
             D+T +  + + V+  +  YG++D++ NNA  V  +KP      ++  D  E     ++
Sbjct: 66  GTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGAL 125
Query: 125 NLVGAFL-----GRNMLLGVCGII---GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV 176
            L+  F       +  ++ V  ++     A   AY  +K  LL + +  A ELG  GIRV
Sbjct: 126 RLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRV 185
Query: 177 NCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAV--------LEPED-AAEAALYLGSD 227
           N V P  +     K + +      G    ++  A         L  ED  A A L++ SD
Sbjct: 186 NSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASD 245
Query: 228 ESKCVSGHNLVVDGG 242
            +  ++G  L V+ G
Sbjct: 246 LASGITGQALDVNCG 260

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 105/259 (40%), Gaps = 35/259 (13%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVL--IADIKDDLGESVCKDIXXXXXXXXXXXYVH 70
           + A +TG + GIG   AR  +  G  V     D K+     V   +              
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKN-----VSAAVDGLRAAGHDVDGSS 79
Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF 130
           CDVT   ++  AV  AV ++G + I+ N+AG          D D A +  +L  NL G F
Sbjct: 80  CDVTSTDEVHAAVAAAVERFGPIGILVNSAG--RNGGGETADLDDALWADVLDTNLTGVF 137
Query: 131 -LGRNML-------LGVCGIIGGAAT---------HAYTSSKHGLLGLMKNTAVELGRFG 173
            + R +L        G   I+  A+T           YT+SKHG++G  K+   EL + G
Sbjct: 138 RVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTG 197
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK---------GAVLEPEDAAEAALYL 224
           I VN V P  V TP+A+   +      G     +          G    PE+ A    YL
Sbjct: 198 ITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYL 257
Query: 225 GSDESKCVSGHNLVVDGGF 243
            +D +  ++   L V GG 
Sbjct: 258 VTDAAASITAQALNVCGGL 276

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 111/254 (43%), Gaps = 44/254 (17%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           ++ K  L+   +RGIG   A + S+ GA+V I    ++L                   YV
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL------------LKRSGHRYV 64
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERILSI 124
            CD+ K+ D+         +  ++DI+  NAG       DE    + + D  E    L +
Sbjct: 65  VCDLRKDLDL------LFEKVKEVDILVLNAGGPKAGFFDE----LTNEDFKEAIDSLFL 114
Query: 125 NLVGAF-----------LGRNMLLGVCGIIGGAATHAYTS--SKHGLLGLMKNTAVELGR 171
           N++               GR + +    +I     + YTS  ++  L G +K  + E+  
Sbjct: 115 NMIKIVRNYLPAMKEKGWGRIVAITSFSVIS-PIENLYTSNSARMALTGFLKTLSFEVAP 173
Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESK 230
           +GI VNCV+P    T   K+   L+++    + S +    + +PE+ A    +L S+++ 
Sbjct: 174 YGITVNCVAPGWTETERVKEL--LSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKAS 231
Query: 231 CVSGHNLVVDGGFA 244
            ++G  +VVDGG +
Sbjct: 232 YLTGQTIVVDGGLS 245

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 24/248 (9%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           +VA +TGG  G+G   +R    H A + +A    +  + V   +               D
Sbjct: 26  RVAFVTGGMGGLGAAISRRL--HDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVD 83
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF-- 130
           V   +  E      +  +GK+D++ NNAG   +     +   + +++ ++  +L   F  
Sbjct: 84  VADFESCERCAEKVLADFGKVDVLINNAGITRDA--TFMKMTKGDWDAVMRTDLDAMFNV 141
Query: 131 ------------LGRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVN 177
                        GR + +G V G  G      Y S+K G+ G  K  A+E  + GI VN
Sbjct: 142 TKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVN 201
Query: 178 CVSPYAVSTPLAKDFLKLADDGLGG--MYSNLKGAVLEPEDAAEAALYLGSDESKCVSGH 235
            VSP  ++T + +    +  D L    +     G +  P++ A    +L SD++  V+G 
Sbjct: 202 TVSPGYLATAMVE---AVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGA 258
Query: 236 NLVVDGGF 243
           +L ++GG 
Sbjct: 259 DLAINGGM 266

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 106/254 (41%), Gaps = 38/254 (14%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIXXXXXXXXXXXYVHC 71
           KVA++TG +RGIG   A   +  G  V+I    K    E V   I               
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALT---AQA 84
Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKP--NILDNDQAEFERILSINLVGA 129
           DV+    +     TA   +G +D++ NNAG    + P   I +   A F+R++++NL G 
Sbjct: 85  DVSDPAAVRRLFATAEEAFGGVDVLVNNAG----IXPLTTIAETGDAVFDRVIAVNLKGT 140
Query: 130 FLGRNML------LGVCGIIGGAATHA----------YTSSKHGLLGLMKNTAVELGRFG 173
           F   N L      L V G I   +T            Y ++K G+       + EL    
Sbjct: 141 F---NTLREAAQRLRVGGRIINXSTSQVGLLHPSYGIYAAAKAGVEAXTHVLSKELRGRD 197
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE----PEDAAEAALYLGSDES 229
           I VN V+P   +T L   FL+   D +   ++ L  A LE    P+D A A  +L   + 
Sbjct: 198 ITVNAVAPGPTATDL---FLEGKSDEVRDRFAKL--APLERLGTPQDIAGAVAFLAGPDG 252
Query: 230 KCVSGHNLVVDGGF 243
             V+G  L  +GG 
Sbjct: 253 AWVNGQVLRANGGI 266

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
           L+GK ALITG A  R I    A+ F + GA++        L E   ++I           
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKL-EKRVREIAKGFGSDLV-- 75
Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTV--DEVKPNILDNDQAEFERILSIN 125
            V CDV+ ++DI+N        +G LDI+ ++      +E K  ++D  +  F+  + I+
Sbjct: 76  -VKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDIS 134
Query: 126 LVGAF-LGRNMLLGVCGIIGGAATHAYTSSK-----HGLLGLMKNT--------AVELGR 171
           +     L R +L  + G  G   T +Y  ++     + ++G+ K          A ++ +
Sbjct: 135 VYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAK 194
Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY--------SNLKGAVLEPEDAAEAALY 223
            G R+N +S   V T        LA   + G +         N  G  +  ED  + A++
Sbjct: 195 HGHRINAISAGPVKT--------LAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVF 246
Query: 224 LGSDESKCVSGHNLVVDGGFAIVNAGFSVFGKSE 257
           L SD ++ ++G  + VD G+ I+     VFG+ E
Sbjct: 247 LCSDWARAITGEVVHVDNGYHIMG----VFGREE 276

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 102/258 (39%), Gaps = 34/258 (13%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L G++AL+TGG+RGIG+  A+   + GA+V I     +     C D             +
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAE----ACADTATRLSAYGDCQAI 82
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             D++ E               +LDI+ NNAGT       +     + +E+++ +N+   
Sbjct: 83  PADLSSEAGARRLAQALGELSARLDILVNNAGT--SWGAALESYPVSGWEKVMQLNVTSV 140
Query: 130 FLGRNMLL-------------------GVCGIIG-GAATHAYTSSKHGLLGLMKNTAVEL 169
           F     LL                    V GI   G   +AY  SK  L  L +  A EL
Sbjct: 141 FSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKEL 200
Query: 170 GRFGIRVNCVS----PYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG 225
               I VN ++    P  ++  +A D   L  D      S   G    PE+ A  A+ L 
Sbjct: 201 VGEHINVNVIAPGRFPSRMTRHIANDPQALEADSA----SIPMGRWGRPEEMAALAISLA 256
Query: 226 SDESKCVSGHNLVVDGGF 243
                 ++G+ + +DGGF
Sbjct: 257 GTAGAYMTGNVIPIDGGF 274

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 31/261 (11%)
Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIXXXXXXXXXX 66
           + L GKVAL TG  RGIG   A    + GA V++         E V  ++          
Sbjct: 17  KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVA- 75
Query: 67  XYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
             +  D++K  ++    + AV+ +G LD + +N+G   EV  + L+  Q  F+++ ++N 
Sbjct: 76  --IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGM--EVWCDELEVTQELFDKVFNLNT 131
Query: 127 VGAFL------------GRNMLL-GVCGIIGGAATHA-YTSSKHGLLGLMKNTAVELGRF 172
            G F             GR +L   +  ++ G   HA Y  SK  + G  +  AV+ G  
Sbjct: 132 RGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAK 191
Query: 173 GIRVNCVSPYAVSTPL-AKDFLKLADDGLGGMYS----------NLKGAVLEPEDAAEAA 221
           G+ VNC++P  V T +  ++    A  G  GM            N    +  P D   A 
Sbjct: 192 GVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAV 251
Query: 222 LYLGSDESKCVSGHNLVVDGG 242
             L  +ES+ ++G  + + GG
Sbjct: 252 SALCQEESEWINGQVIKLTGG 272

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 92/223 (41%), Gaps = 25/223 (11%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           KV LITG + GIGE  AR     GAK+L+   +    E++  +I               D
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVL---D 61
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG 132
           VT    +      AV  +G++D++ NNAG +       +  D  E+ER++ +N+ G   G
Sbjct: 62  VTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVD--EWERMIDVNIKGVLWG 119
Query: 133 RNMLL--------------GVCGIIGGAATHA-YTSSKHGLLGLMKNTAVELGRFGIRVN 177
              +L              G  G +    T A Y ++K  +  +      E     IRV 
Sbjct: 120 IGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVT 177
Query: 178 CVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEA 220
           CV+P  V + LA       ++ +  M    +   L+P D A A
Sbjct: 178 CVNPGVVESELAGTITH--EETMAAM-DTYRAIALQPADIARA 217

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 105/257 (40%), Gaps = 40/257 (15%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
             GK   +TG  +GIG  TA  F + GAKV   D      ++  ++              
Sbjct: 5   FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFD------QAFTQEQYPFATEV------ 52
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             DV     +       + +  +LD + N AG +     + L  +  ++++  ++N+ GA
Sbjct: 53  -MDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKE--DWQQTFAVNVGGA 109
Query: 130 F--------LGRNMLLGVCGIIGGAATH-------AYTSSKHGLLGLMKNTAVELGRFGI 174
           F          R    G    +   A H       AY +SK  L  L  +  +EL   G+
Sbjct: 110 FNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGV 169
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDG----LGGMYSNLK-----GAVLEPEDAAEAALYLG 225
           R N VSP +  T + +  L ++DD     + G     K     G +  P++ A   L+L 
Sbjct: 170 RCNVVSPGSTDTDMQRT-LWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLA 228
Query: 226 SDESKCVSGHNLVVDGG 242
           SD +  ++  ++VVDGG
Sbjct: 229 SDLASHITLQDIVVDGG 245

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 28/262 (10%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIXXXXXXXXXXXY 68
           L+G  AL+TGG++GIG       +  GA+V      + +L E  C +I            
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDE--CLEIWREKGLNVEGSV 76
Query: 69  VHCDVTKEKDIENAVNTAVTQY-GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
             CD+    + +  + T    + GKL+I+ NNAG V  +     D  + ++  I+  N  
Sbjct: 77  --CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVV--IHKEAKDFTEKDYNIIMGTNFE 132
Query: 128 GAF-----------LGRN----MLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            A+             +N     L  + G     +   Y++SK  +  + K+ A E  + 
Sbjct: 133 AAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKD 192
Query: 173 GIRVNCVSPYAVSTPLAKDFLK----LADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE 228
            IRVN V+P  + TPL +  +K      ++    +     G   +P++ +    +L    
Sbjct: 193 NIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPA 252
Query: 229 SKCVSGHNLVVDGGFAIVNAGF 250
           +  ++G  +  DGGF   N GF
Sbjct: 253 ASYITGQIIWADGGFT-ANGGF 273

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 94/240 (39%), Gaps = 26/240 (10%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           LQ ++ L+TG + GIG   A  ++++GA V++    ++    V + I            +
Sbjct: 12  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 71
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
                  ++     +     Y +LD + +NAG + E+ P + + D   ++ ++ +N+   
Sbjct: 72  DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGP-MSEQDPQIWQDVMQVNVNAT 130
Query: 130 FLGRN---------------MLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F+                        G  G A   AY +SK    G+M+  A E     +
Sbjct: 131 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLADEYQNRSL 190
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG 234
           RVNC++P    T +        D         LK     P D     L+L  D+S+  +G
Sbjct: 191 RVNCINPGGTRTSMRASAFPTEDP------QKLK----TPADIMPLYLWLMGDDSRRKTG 240

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 106/265 (40%), Gaps = 56/265 (21%)
Query: 11  QGKVALITGGARGIGECTARLFSKHGAKVL--------IADIKDDLGESVCKDIXXXXXX 62
           QGK A++ GG  G G  T R   + GA+VL        IA I+++ G  V          
Sbjct: 7   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHA-------- 58
Query: 63  XXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERI 121
                 +  D+    +I      A    G +D++  NAG V E++P   D   +A ++R 
Sbjct: 59  ------LRSDIADLNEIAVLGAAAGQTLGAIDLLHINAG-VSELEP--FDQVSEASYDRQ 109
Query: 122 LSINLVGAFLGRNMLLGVC---GII----------GGAATHAYTSSKHGLLGLMKNTAVE 168
            ++N  GAF     L  +    G I          G      Y++SK  L+      A E
Sbjct: 110 FAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAE 169
Query: 169 LGRFGIRVNCVSPYAVSTPLA----------KDFLKLADDGLGGMYSNLKGAVLEPEDAA 218
           L   GIRVN VSP  + TP             +F  L D+      +         ++ A
Sbjct: 170 LLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTA------DEVA 223
Query: 219 EAALYLGSDESKCVSGHNLVVDGGF 243
            A L+L + E+   +G  L VDGG 
Sbjct: 224 RAVLFL-AFEATFTTGAKLAVDGGL 247

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 106/265 (40%), Gaps = 56/265 (21%)
Query: 11  QGKVALITGGARGIGECTARLFSKHGAKVL--------IADIKDDLGESVCKDIXXXXXX 62
           QGK A++ GG  G G  T R   + GA+VL        IA I+++ G  V          
Sbjct: 6   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHA-------- 57
Query: 63  XXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERI 121
                 +  D+    +I      A    G +D++  NAG V E++P   D   +A ++R 
Sbjct: 58  ------LRSDIADLNEIAVLGAAAGQTLGAIDLLHINAG-VSELEP--FDQVSEASYDRQ 108
Query: 122 LSINLVGAFLGRNMLLGVC---GII----------GGAATHAYTSSKHGLLGLMKNTAVE 168
            ++N  GAF     L  +    G I          G      Y++SK  L+      A E
Sbjct: 109 FAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAE 168
Query: 169 LGRFGIRVNCVSPYAVSTPLA----------KDFLKLADDGLGGMYSNLKGAVLEPEDAA 218
           L   GIRVN VSP  + TP             +F  L D+      +         ++ A
Sbjct: 169 LLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTA------DEVA 222
Query: 219 EAALYLGSDESKCVSGHNLVVDGGF 243
            A L+L + E+   +G  L VDGG 
Sbjct: 223 RAVLFL-AFEATFTTGAKLAVDGGL 246

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 107/256 (41%), Gaps = 31/256 (12%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLI--ADIKDDLGESVCK---DIXXXXXXXX 64
           L+GKVAL+TG +RGIG   A+  +  GA V I   + K++  E+V +   +         
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE--FERIL 122
               +H        ++N +    T   K DI+ NNAG    + P     +  E  F+R +
Sbjct: 65  NLESLHGVEALYSSLDNELQNR-TGSTKFDILINNAG----IGPGAFIEETTEQFFDRXV 119
Query: 123 SINLVGAFLGRNMLLGVCG------IIGGAATH-------AYTSSKHGLLGLMKNTAVEL 169
           S+N    F      L           I  AAT        AY+ +K  +       A +L
Sbjct: 120 SVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSXTKGAINTXTFTLAKQL 179
Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGA---VLEPEDAAEAALYLGS 226
           G  GI VN + P  V T    + L    D     Y+    A   + E ED A+ A +L S
Sbjct: 180 GARGITVNAILPGFVKTDXNAELLS---DPXXKQYATTISAFNRLGEVEDIADTAAFLAS 236
Query: 227 DESKCVSGHNLVVDGG 242
            +S+ V+G  + V GG
Sbjct: 237 PDSRWVTGQLIDVSGG 252

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 23/254 (9%)
Query: 5   LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXX 64
           + L+R   +  ++ G  R IG   A  F++ GA V++    +   E     +        
Sbjct: 1   MSLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVL--TYNGAAEGAATAVAEIEKLGR 58
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
               +  D+T   ++E A++ A  ++G++  + + AG +   +  I + D+A + ++L +
Sbjct: 59  SALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLI-ARKTIAEMDEAFWHQVLDV 117
Query: 125 NLVGAFLGRNMLL---GVCGII-----------GGAATHAYTSSKHGLLGLMKNTAVELG 170
           NL   FL     L      G I           GG    AY +SK  ++   +  A E+G
Sbjct: 118 NLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVG 177
Query: 171 RFGIRVNCVSPYAVSTPLAKDFLK--LADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE 228
              IRVN V P  +ST     F K  + +   G      +G+    ED A    +L SD+
Sbjct: 178 P-KIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGS---SEDVAGLVAFLASDD 233
Query: 229 SKCVSGHNLVVDGG 242
           +  V+G    ++GG
Sbjct: 234 AAYVTGACYDINGG 247

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 109/244 (44%), Gaps = 34/244 (13%)
Query: 16  LITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTK 75
           ++TGG  GIG+     F + G KV   DI +       K+            Y H DV  
Sbjct: 6   IVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE-------RPNLFYFHGDVAD 58
Query: 76  EKDIENAVNTAVTQYGKLDIMFNNAGTVDE-VKPNILDNDQAEFERILSINLVGAF---- 130
              ++  V  A+ +  ++D++ NNA    + +  ++L     EF+ ILS+ L   +    
Sbjct: 59  PLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLL---YEEFDYILSVGLKAPYELSR 115
Query: 131 LGRNMLLGVCG-IIGGAATH---------AYTSSKHGLLGLMKNTAVELGRFGIRVNCVS 180
           L R+ L+   G II  A+T          AY S+K G++ L    A+ LG   + VNC++
Sbjct: 116 LCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIA 174
Query: 181 PYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVD 240
           P  ++    ++F +     +        G V  P+D +   L+L   +   ++G  ++VD
Sbjct: 175 PGWINVTEQQEFTQEDCAAIPA------GKVGTPKDISNMVLFLCQQDF--ITGETIIVD 226
Query: 241 GGFA 244
           GG +
Sbjct: 227 GGMS 230

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 109/265 (41%), Gaps = 35/265 (13%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIA-----DIKDDLGESVCKDIXXXXXXXX 64
           L+G  AL+TGG+RGIG       +  GA V        ++ D L +   K          
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV-- 64
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQY-GKLDIMFNNAGTVDEVKPNILDNDQAEFERILS 123
                 CD++   + +  +NT    + GKL+I+ NNAG V  +     D    ++  I+S
Sbjct: 65  ------CDLSSRSERQELMNTVANHFHGKLNILVNNAGIV--IYKEAKDYTVEDYSLIMS 116
Query: 124 INLVGAF----LGRNMLLG-----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
           IN   A+    L    L             V G +       Y ++K  +  L +  A E
Sbjct: 117 INFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFE 176
Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLAD--DGLGGMYSNLKGAVL-EPEDAAEAALYLG 225
             +  IRVN V P  ++T L +  ++  +  + L  +        + EP++ A    +L 
Sbjct: 177 WAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLC 236
Query: 226 SDESKCVSGHNLVVDGGFAIVNAGF 250
              +  V+G  + VDGG  + N GF
Sbjct: 237 FPAASYVTGQIIYVDGGL-MANCGF 260

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 109/265 (41%), Gaps = 35/265 (13%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIA-----DIKDDLGESVCKDIXXXXXXXX 64
           L+G  AL+TGG+RGIG       +  GA V        ++ D L +   K          
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV-- 63
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQY-GKLDIMFNNAGTVDEVKPNILDNDQAEFERILS 123
                 CD++   + +  +NT    + GKL+I+ NNAG V  +     D    ++  I+S
Sbjct: 64  ------CDLSSRSERQELMNTVANHFHGKLNILVNNAGIV--IYKEAKDYTVEDYSLIMS 115
Query: 124 INLVGAF----LGRNMLLG-----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
           IN   A+    L    L             V G +       Y ++K  +  L +  A E
Sbjct: 116 INFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFE 175
Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLAD--DGLGGMYSNLKGAVL-EPEDAAEAALYLG 225
             +  IRVN V P  ++T L +  ++  +  + L  +        + EP++ A    +L 
Sbjct: 176 WAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLC 235
Query: 226 SDESKCVSGHNLVVDGGFAIVNAGF 250
              +  V+G  + VDGG  + N GF
Sbjct: 236 FPAASYVTGQIIYVDGGL-MANCGF 259

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 37/247 (14%)
Query: 5   LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXX 64
           + +++ +G  A+++GGA G+GE T R     G  V+IAD+  + G+++  ++        
Sbjct: 23  VTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL------GN 76
Query: 65  XXXYVHCDVTKEKDIENAVNTAVTQYGKLDIM------FNNAGTVDEVKPNILD------ 112
              +V  +VT E  +  A+  A  Q G+L         F  A  + +   +  D      
Sbjct: 77  RAEFVSTNVTSEDSVLAAIE-AANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTK 135
Query: 113 ------NDQAEFERILSINLVGAFLGRN-------MLLGVCGIIGGAATHAYTSSKHGLL 159
                 N      R+++ ++  A    N       +   + G  G     AY ++K G++
Sbjct: 136 TIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVI 195
Query: 160 GLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDA 217
           GL    A +L   GIRVN ++P  + TP+ +    + ++ L    +N+     +  P++ 
Sbjct: 196 GLTIAAARDLSSAGIRVNTIAPGTMKTPIMES---VGEEALAKFAANIPFPKRLGTPDEF 252
Query: 218 AEAALYL 224
           A+AA +L
Sbjct: 253 ADAAAFL 259

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIK--DDLGESVCKDIXXXXXXXXXXX 67
           L+G+ AL+TG   G+G+  A   +  GA+V+ A  +  D+  + + KD            
Sbjct: 7   LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKD----GGNASALL 62
Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTV---DEVKPNILDNDQAEFERILSI 124
               D    KD       + T  G  DI+ NNAG +   D V+ + LD D+     ++ +
Sbjct: 63  IDFADPLAAKD-------SFTDAG-FDILVNNAGIIRRADSVEFSELDWDE-----VMDV 109
Query: 125 NLVGAFL------------GRN-MLLGVCGII---GGAATHAYTSSKHGLLGLMKNTAVE 168
           NL   F             GR+  ++ +  ++   GG    +YT++KHG+ GL K  A E
Sbjct: 110 NLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANE 169
Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE 228
               GI VN ++P  + T   +     A      +     G     ED A AA++L S  
Sbjct: 170 WAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAA 229
Query: 229 SKCVSGHNLVVDGGF 243
           +  V G  L VDGG+
Sbjct: 230 ADYVHGAILNVDGGW 244

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 34/256 (13%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+ KVA ITGG  GIG   A +F +HG   +IA     L   +                +
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIAS--RSLPRVLTAARKLAGATGRRCLPL 82
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             DV     +  AV+ A+ ++G++DI+ N A          L  +   F+ ++ I+  G 
Sbjct: 83  SMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFN--AFKTVMDIDTSGT 140
Query: 130 F-LGR-----------NMLLGVCGIIG--GAATHAYT-SSKHGLLGLMKNTAVELGRFGI 174
           F + R            +++ +   +G  G A   +  S+K  +  + ++ AVE G   I
Sbjct: 141 FNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNI 200
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPE--------DAAEAALYLGS 226
           RVN ++P  +S     + L+     LGG  ++L   V            + A + LYL S
Sbjct: 201 RVNSLAPGPIS---GTEGLRR----LGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLAS 253
Query: 227 DESKCVSGHNLVVDGG 242
             +  V+G  LV DGG
Sbjct: 254 PLASYVTGAVLVADGG 269

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 26/198 (13%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-----GESVCKDIXXXXXXX 63
           R  G+V L+TG   G+G   A  F++ GA V++ D+  D      G S    +       
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65
Query: 64  XXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTV-DEVKPNILDNDQAEFERIL 122
                 + D  +    E  V TA+  +G++D++ NNAG + D     I D D   ++ I 
Sbjct: 66  GGKAVANYDSVEAG--EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDED---WDIIQ 120
Query: 123 SINLVGAF--------------LGRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
            ++L G+F               GR +      GI G      Y+++K GLLGL     +
Sbjct: 121 RVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANTLVI 180
Query: 168 ELGRFGIRVNCVSPYAVS 185
           E  +  I  N ++P A S
Sbjct: 181 EGRKNNIHCNTIAPNAGS 198

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 46/199 (23%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLI--------ADIKDDLGESVCKDIXXXX 60
           +L+G+  LITGGA G+G      F   GAKV +        A+++ D G++V        
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLG------ 55
Query: 61  XXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVD------EVKPNILDND 114
                   +  DV   +D + A +  V ++GK+D +  NAG  D      ++    LD  
Sbjct: 56  --------IVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLD-- 105
Query: 115 QAEFERILSINLVG----------AFLGR--NMLLGV--CGIIGGAATHAYTSSKHGLLG 160
            A F+ +  IN+ G          A +    N++  +   G         YT++KH ++G
Sbjct: 106 -AAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVG 164
Query: 161 LMKNTAVELGRFGIRVNCV 179
           L++  A EL  + +RVN V
Sbjct: 165 LVRELAFELAPY-VRVNGV 182

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 84/199 (42%), Gaps = 28/199 (14%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           +L G+VALITGGA G+G      F   GA+V + D      +S  +              
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLD------KSAERLRELEVAHGGNAVG 55
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVK-----PNILDNDQAEFERILS 123
           V  DV   +D + A    +  +GK+D +  NAG  D        P   D   A F+ I  
Sbjct: 56  VVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPE--DKIDAAFDDIFH 113
Query: 124 INLVGAFLGRNMLL--------GVCGIIGGAATHA------YTSSKHGLLGLMKNTAVEL 169
           +N+ G        L         V   I  A  +       YT++KH ++GL++  A EL
Sbjct: 114 VNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFEL 173
Query: 170 GRFGIRVNCVSPYAVSTPL 188
               +RVN V+P  ++T L
Sbjct: 174 APH-VRVNGVAPGGMNTDL 191

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 103/248 (41%), Gaps = 17/248 (6%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           RL+ + AL+TGG  GIG   A  +++ GA V I  +  +  E   +              
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAE-EEDAQQVKALIEECGRKAVL 104
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  D++ E    + V+ A    G LDI+   AG    + P I D    +F++  ++N+  
Sbjct: 105 LPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAI-PEIKDLTSEQFQQTFAVNVFA 163
Query: 129 AFL----GRNMLLGVCGIIGGAATHAYTSSKH---------GLLGLMKNTAVELGRFGIR 175
            F        +L     II  ++  AY  S H          +L   +  A ++   GIR
Sbjct: 164 LFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIR 223
Query: 176 VNCVSPYAVSTPLAKDFLKLADD-GLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG 234
           VN V+P  + T L     +  D     G  + +K A  +P + A   +YL S ES  V+ 
Sbjct: 224 VNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAG-QPAELAPVYVYLASQESSYVTA 282
Query: 235 HNLVVDGG 242
               V GG
Sbjct: 283 EVHGVCGG 290

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 107/248 (43%), Gaps = 25/248 (10%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           +  L+TG ++GIG   AR  +  G  + +   +D  G    + +            +  D
Sbjct: 27  RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQ--ETLNAIVANGGNGRLLSFD 84
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL------ 126
           V   +     +   + Q+G    + +NAG   +     L ND  +++ ++  NL      
Sbjct: 85  VANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSND--DWDAVIHTNLDSFYNV 142
Query: 127 --------VGAFLGRNM--LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV 176
                   +GA  G  +  L  V G++G      Y+++K G++G  K  A+EL +  I V
Sbjct: 143 IQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITV 202
Query: 177 NCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKCVSGH 235
           NC++P  + T +    +++ +  L    S +    + + E+ A  A YL SD +  V+  
Sbjct: 203 NCIAPGLIDTGM----IEMEESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQ 258
Query: 236 NLVVDGGF 243
            + ++GG 
Sbjct: 259 VISINGGM 266

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 119/275 (43%), Gaps = 41/275 (14%)
Query: 2   HANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXX 61
            A L     QGKVA ITGG  G+G+    L S  GA+ +IA  K D+ ++  + I     
Sbjct: 16  KAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG 75
Query: 62  XXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQA 116
                  + CDV     ++N V+  +   G  +I+ NNA        + + PN       
Sbjct: 76  NKVHA--IQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPN------- 126
Query: 117 EFERILSINLVG-AF----LGRNMLLGVCGIIGGAATHAY-----------TSSKHGLLG 160
            ++ I  I L G AF    +G+ ++    G    + T  Y            S+K G+  
Sbjct: 127 AWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEA 186
Query: 161 LMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG------LGGMYSNLKGAVLEP 214
           + K+ A E G++G+R N + P  + T  A  F +L   G      +G +     G V   
Sbjct: 187 MSKSLAAEWGKYGMRFNVIQPGPIKTKGA--FSRLDPTGTFEKEMIGRIPCGRLGTV--- 241
Query: 215 EDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAG 249
           E+ A  A +L SD +  ++G  +  DGG  ++ +G
Sbjct: 242 EELANLAAFLCSDYASWINGAVIKFDGGEEVLISG 276

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 112/272 (41%), Gaps = 46/272 (16%)
Query: 2   HANLMLR-RLQGKVALITG--GARGIGECTARLFSKHGAKVLIADIKDDLG-ESVCKDIX 57
           H +L+ +  L+GKV ++TG  G +G+G   AR  ++ GA V I       G E   K++ 
Sbjct: 9   HESLLDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELE 68
Query: 58  XXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE 117
                        C V   +  E  V   V  +G++D    NAG   +    ILD     
Sbjct: 69  KTYGIKAKA--YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATAD--SGILDGSVEA 124
Query: 118 FERILSINLVGAF------------LGRNMLLGVCGIIGGAATH-----AYTSSKHGLLG 160
           +  ++ ++L G F             G   L+    + G  A       +Y  +K G + 
Sbjct: 125 WNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIH 184
Query: 161 LMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFL---------KLADDGLGGMYSNLKGAV 211
           + ++ A E   F  RVN +SP  + T L+ DF+          +   G  G+   LKGA 
Sbjct: 185 MARSLANEWRDFA-RVNSISPGYIDTGLS-DFVPKETQQLWHSMIPMGRDGLAKELKGAY 242
Query: 212 LEPEDAAEAALYLGSDESKCVSGHNLVVDGGF 243
                     +Y  SD S   +G +L++DGG+
Sbjct: 243 ----------VYFASDASTYTTGADLLIDGGY 264

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 109/276 (39%), Gaps = 42/276 (15%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGE-----SVCKDIXXX---- 59
           R+Q KV L+TGGARG G   A   ++ GA +++ DI  D+       +  +D+       
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66
Query: 60  XXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG--TVDEVKPNILDNDQAE 117
                       DV     +   +  AV ++GKLD++  NAG   +    P     D  +
Sbjct: 67  EKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFD 126
Query: 118 FERILSINLVGAFL-----GRNMLL--GVCGII-----------GGAATHAYTSSKHGLL 159
            + +  IN V A L     G +++    V G+I            G     Y+ +K  + 
Sbjct: 127 VDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVD 186
Query: 160 GLMKNTAVELGRFGIRVNCVSPYAVST------PLAKDFLK------LADDGLG-GMYSN 206
                 A +L    IR N + P  V+T      P+ + F         AD  L       
Sbjct: 187 SYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQA 246
Query: 207 LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG 242
           +    +E  D + A  +L SDES+ V+G    VD G
Sbjct: 247 MPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG 282

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 117/282 (41%), Gaps = 57/282 (20%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLI-----ADIKDDLGESVCKDIXXXXXXXX 64
           ++   A++TG A+ IG   A    + G +V+I     A+    L + + K+         
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSN 54
Query: 65  XXXYVHCDVTKEK----DIENAVNTAVTQYGKLDIMFNNAG---TVDEVKPNILDND--- 114
                  D+T         E  +N+    +G+ D++ NNA        V+ +  DN    
Sbjct: 55  TAVVXQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGK 114
Query: 115 --QAEFERILSINLVGAFL----------GRN--------MLLGVCGIIGGAATHA---Y 151
             + +   ++  N +  FL          G N         ++ +C  +      A   Y
Sbjct: 115 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLY 174
Query: 152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA-----KDFLKLADDGLGGMYSN 206
              KH L+GL ++ A+EL  +GIRVN V+P     P+A     KD  +     LG   ++
Sbjct: 175 NMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWR-RKVPLGRREAS 233
Query: 207 LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA 248
                   E  A+A ++L S  ++ ++G  + VDGG ++V+A
Sbjct: 234 A-------EQIADAVIFLVSGSAQYITGSIIKVDGGLSLVHA 268

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 19/251 (7%)
Query: 11  QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVH 70
           Q K AL+TG +RG+G+  A   +++G  ++I   +    ++  +              V 
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSK--KAALETAEEIEKLGVKVLVVK 60
Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL---- 126
            +V +   I+         +G+LD+  NNA +   ++P +++ ++  ++  ++IN     
Sbjct: 61  ANVGQPAKIKEMFQQIDETFGRLDVFVNNAAS-GVLRP-VMELEETHWDWTMNINAKALL 118
Query: 127 -----VGAFLGRN---MLLGVCGIIGGAATHAYTS---SKHGLLGLMKNTAVELGRFGIR 175
                    + +N    ++ +  +        YT+   SK  L  L +  AVEL    I 
Sbjct: 119 FCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQII 178
Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGH 235
           VN VS  A+ T   K F    D       +   G ++E +D  +   +L S ++  + G 
Sbjct: 179 VNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQ 238
Query: 236 NLVVDGGFAIV 246
            ++VDGG +++
Sbjct: 239 TIIVDGGRSLL 249

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 117/282 (41%), Gaps = 57/282 (20%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLI-----ADIKDDLGESVCKDIXXXXXXXX 64
           ++   A++TG A+ IG   A    + G +V+I     A+    L + + K+         
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSN 74
Query: 65  XXXYVHCDVTKEK----DIENAVNTAVTQYGKLDIMFNNAG---TVDEVKPNILDND--- 114
                  D+T         E  +N+    +G+ D++ NNA        V+ +  DN    
Sbjct: 75  TAVVXQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGK 134
Query: 115 --QAEFERILSINLVGAFL----------GRNM--------LLGVCGIIGGAATHA---Y 151
             + +   ++  N +  FL          G N         ++ +C  +      A   Y
Sbjct: 135 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLY 194
Query: 152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA-----KDFLKLADDGLGGMYSN 206
              KH L+GL ++ A+EL  +GIRVN V+P     P+A     KD  +     LG   ++
Sbjct: 195 NMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWR-RKVPLGRREAS 253
Query: 207 LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA 248
                   E  A+A ++L S  ++ ++G  + VDGG ++V+A
Sbjct: 254 A-------EQIADAVIFLVSGSAQYITGSIIKVDGGLSLVHA 288

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 117/282 (41%), Gaps = 57/282 (20%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLI-----ADIKDDLGESVCKDIXXXXXXXX 64
           ++   A++TG A+ IG   A    + G +V+I     A+    L + + K+         
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSN 74
Query: 65  XXXYVHCDVTKEK----DIENAVNTAVTQYGKLDIMFNNAG---TVDEVKPNILDND--- 114
                  D+T         E  +N+    +G+ D++ NNA        V+ +  DN    
Sbjct: 75  TAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGK 134
Query: 115 --QAEFERILSINLVGAFL----------GRNM--------LLGVCGIIGGAATHA---Y 151
             + +   ++  N +  FL          G N         ++ +C  +      A   Y
Sbjct: 135 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLY 194
Query: 152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA-----KDFLKLADDGLGGMYSN 206
              KH L+GL ++ A+EL  +GIRVN V+P     P+A     KD  +     LG   ++
Sbjct: 195 NMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWR-RKVPLGRREAS 253
Query: 207 LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA 248
                   E  A+A ++L S  ++ ++G  + VDGG ++V+A
Sbjct: 254 A-------EQIADAVIFLVSGSAQYITGSIIKVDGGLSLVHA 288

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 117/282 (41%), Gaps = 57/282 (20%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLI-----ADIKDDLGESVCKDIXXXXXXXX 64
           ++   A++TG A+ IG   A    + G +V+I     A+    L + + K+         
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSN 74
Query: 65  XXXYVHCDVTKEK----DIENAVNTAVTQYGKLDIMFNNAG---TVDEVKPNILDND--- 114
                  D+T         E  +N+    +G+ D++ NNA        V+ +  DN    
Sbjct: 75  TAVVXQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGK 134
Query: 115 --QAEFERILSINLVGAFL----------GRN--------MLLGVCGIIGGAATHA---Y 151
             + +   ++  N +  FL          G N         ++ +C  +      A   Y
Sbjct: 135 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLY 194
Query: 152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA-----KDFLKLADDGLGGMYSN 206
              KH L+GL ++ A+EL  +GIRVN V+P     P+A     KD  +     LG   ++
Sbjct: 195 NMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWR-RKVPLGRREAS 253
Query: 207 LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA 248
                   E  A+A ++L S  ++ ++G  + VDGG ++V+A
Sbjct: 254 A-------EQIADAVIFLVSGSAQYITGSIIKVDGGLSLVHA 288

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 117/282 (41%), Gaps = 57/282 (20%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLI-----ADIKDDLGESVCKDIXXXXXXXX 64
           ++   A++TG A+ IG   A    + G +V+I     A+    L + + K+         
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSN 54
Query: 65  XXXYVHCDVTKEK----DIENAVNTAVTQYGKLDIMFNNAG---TVDEVKPNILDND--- 114
                  D+T         E  +N+    +G+ D++ NNA        V+ +  DN    
Sbjct: 55  TAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGK 114
Query: 115 --QAEFERILSINLVGAFL----------GRN--------MLLGVCGIIGGAATHA---Y 151
             + +   ++  N +  FL          G N         ++ +C  +      A   Y
Sbjct: 115 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLY 174
Query: 152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA-----KDFLKLADDGLGGMYSN 206
              KH L+GL ++ A+EL  +GIRVN V+P     P+A     KD  +     LG   ++
Sbjct: 175 NMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWR-RKVPLGRREAS 233
Query: 207 LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA 248
                   E  A+A ++L S  ++ ++G  + VDGG ++V+A
Sbjct: 234 A-------EQIADAVIFLVSGSAQYITGSIIKVDGGLSLVHA 268

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 117/282 (41%), Gaps = 57/282 (20%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLI-----ADIKDDLGESVCKDIXXXXXXXX 64
           ++   A++TG A+ IG   A    + G +V+I     A+    L + + K+         
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSN 54
Query: 65  XXXYVHCDVTKEK----DIENAVNTAVTQYGKLDIMFNNAG---TVDEVKPNILDND--- 114
                  D+T         E  +N+    +G+ D++ NNA        V+ +  DN    
Sbjct: 55  TAVVXQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGK 114
Query: 115 --QAEFERILSINLVGAFL----------GRN--------MLLGVCGIIGGAATHA---Y 151
             + +   ++  N +  FL          G N         ++ +C  +      A   Y
Sbjct: 115 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLY 174
Query: 152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA-----KDFLKLADDGLGGMYSN 206
              KH L+GL ++ A+EL  +GIRVN V+P     P+A     KD  +     LG   ++
Sbjct: 175 NMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWR-RKVPLGRREAS 233
Query: 207 LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA 248
                   E  A+A ++L S  ++ ++G  + VDGG ++V+A
Sbjct: 234 A-------EQIADAVIFLVSGSAQYITGSIIKVDGGLSLVHA 268

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 117/282 (41%), Gaps = 57/282 (20%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLI-----ADIKDDLGESVCKDIXXXXXXXX 64
           ++   A++TG A+ IG   A    + G +V+I     A+    L + + K+         
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSN 74
Query: 65  XXXYVHCDVTKEK----DIENAVNTAVTQYGKLDIMFNNAG---TVDEVKPNILDND--- 114
                  D+T         E  +N+    +G+ D++ NNA        V+ +  DN    
Sbjct: 75  TAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGK 134
Query: 115 --QAEFERILSINLVGAFL----------GRN--------MLLGVCGIIGGAATHA---Y 151
             + +   ++  N +  FL          G N         ++ +C  +      A   Y
Sbjct: 135 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLY 194
Query: 152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA-----KDFLKLADDGLGGMYSN 206
              KH L+GL ++ A+EL  +GIRVN V+P     P+A     KD  +     LG   ++
Sbjct: 195 NMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWR-RKVPLGRREAS 253
Query: 207 LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA 248
                   E  A+A ++L S  ++ ++G  + VDGG ++V+A
Sbjct: 254 A-------EQIADAVIFLVSGSAQYITGSIIKVDGGLSLVHA 288

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 117/276 (42%), Gaps = 41/276 (14%)
Query: 1   MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXX 60
             A L     QGKVA ITGG  G+G+    L S  GA+ +IA  K D+ ++  + I    
Sbjct: 15  QKAXLPPNSFQGKVAFITGGGTGLGKGXTTLLSSLGAQCVIASRKXDVLKATAEQISSQT 74
Query: 61  XXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQ 115
                   + CDV     ++N V+  +   G  +I+ NNA        + + PN      
Sbjct: 75  GNKVHA--IQCDVRDPDXVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPN------ 126
Query: 116 AEFERILSINLVG-AF----LGRNMLLGVCGIIGGAATHAY-----------TSSKHGLL 159
             ++ I  I L G AF    +G+ ++    G    + T  Y            S+K G+ 
Sbjct: 127 -AWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVE 185
Query: 160 GLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG------LGGMYSNLKGAVLE 213
              K+ A E G++G R N + P  + T  A  F +L   G      +G +     G V  
Sbjct: 186 AXSKSLAAEWGKYGXRFNVIQPGPIKTKGA--FSRLDPTGTFEKEXIGRIPCGRLGTV-- 241
Query: 214 PEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAG 249
            E+ A  A +L SD +  ++G  +  DGG  ++ +G
Sbjct: 242 -EELANLAAFLCSDYASWINGAVIKFDGGEEVLISG 276

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 94/248 (37%), Gaps = 27/248 (10%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L  ++ L+TG + GIG   A  ++++GA V++    ++    V   I            +
Sbjct: 8   LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 67
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
                  ++ +      V  Y +LD + +NAG + +V P    N Q  ++ ++ IN+   
Sbjct: 68  DLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQV-WQDVMQINVNAT 126
Query: 130 FLGRN---------------MLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F+                        G  G A   AY +SK    G+M+  A E  +  +
Sbjct: 127 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RL 185
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG 234
           RVNC++P    T +        D         LK     P D     L+L  D+S+  +G
Sbjct: 186 RVNCINPGGTRTAMRASAFPTEDP------QKLK----TPADIMPLYLWLMGDDSRRKTG 235
Query: 235 HNLVVDGG 242
                  G
Sbjct: 236 MTFDAQPG 243

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 112/261 (42%), Gaps = 56/261 (21%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           + AL+TGGA G+G   A      G +V++ D++ + GE +               YV  D
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GEDLI--------------YVEGD 47
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGT------VDEVKPNILDNDQAEFERILSINL 126
           VT+E+D+  AV  A  +   L  + + AG       + +  P+ L++    F R+L +NL
Sbjct: 48  VTREEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLES----FRRVLEVNL 102
Query: 127 VGAFLGRNMLL--------------GVCGII----------GGAATHAYTSSKHGLLGLM 162
           +G F   N+L               G  G+I          G     AY +SK G++ L 
Sbjct: 103 LGTF---NVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALT 159
Query: 163 KNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL 222
              A EL  +GIRV  V+P    TPL +   + A   L          +  PE+   AAL
Sbjct: 160 LPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVP-FPPRLGRPEEY--AAL 216
Query: 223 YLGSDESKCVSGHNLVVDGGF 243
            L   E+  ++G  + +DG  
Sbjct: 217 VLHILENPMLNGEVVRLDGAL 237

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 107/254 (42%), Gaps = 20/254 (7%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
           M    Q +  L+TGG  GIG+  A      GA V+I     D      +++         
Sbjct: 5   MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGA 64
Query: 66  XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             Y   D+T E +   AV+     +G+L  + + AG  + + P I   D   + R + +N
Sbjct: 65  IRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGP-ITQVDSEAWRRTVDLN 123
Query: 126 LVGAFL-----GRNMLLG----VCGI--IGGAATH----AYTSSKHGLLGLMKNTAVELG 170
           + G         R M+ G      GI  I  + TH    AY  +K  +  LM+  A ELG
Sbjct: 124 VNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELG 183
Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL--EPEDAAEAALYLGSDE 228
              +RVN + P  + T L     + A+  L   Y+         E ED A  A++L SD 
Sbjct: 184 ASWVRVNSIRPGLIRTDLVAAITESAE--LSSDYAMCTPLPRQGEVEDVANMAMFLLSDA 241
Query: 229 SKCVSGHNLVVDGG 242
           +  V+G  + VDGG
Sbjct: 242 ASFVTGQVINVDGG 255

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 24/230 (10%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           LQGKVALITG + GIGE TAR  +  GA V IA  + +   ++  ++            +
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDEL---TAAGAKVHVL 61
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG- 128
             DV   + ++ AV + V   G LDI+ NNAG +  +   + D D  ++ R++  NL+G 
Sbjct: 62  ELDVADRQGVDAAVASTVEALGGLDILVNNAGIM--LLGPVEDADTTDWTRMIDTNLLGL 119
Query: 129 AFLGRNMLL-------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
            ++ R  L               + G +       Y ++K G+    +    E+   G+R
Sbjct: 120 MYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVR 179
Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAV--LEPEDAAEAALY 223
           V  + P    T L       A      MY      +  L+ +D AEA  Y
Sbjct: 180 VVVIEPGTTDTELRGHITHTATK---EMYEQRISQIRKLQAQDIAEAVRY 226

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 91  GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF-LGRNML------------- 136
           G+LDI+ NNAG +   +  I +   A++   L +N+   F + R  +             
Sbjct: 93  GRLDIVVNNAGVISRGR--ITETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGGGAIVN 150
Query: 137 LGVC-GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTP-LAKDFLK 194
           +  C G+  G     Y  +K  L  L +    +    GIR+N V P  V+TP L   F K
Sbjct: 151 VASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXLRTGFAK 210
Query: 195 L---ADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI 245
                D  +  +   +  G + EPED A+  L+L SD ++ + G  + V+GG A+
Sbjct: 211 RGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAV 265

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXX-- 66
           RL G    ITG +RGIG+  A   +K GA ++IA         +   I            
Sbjct: 42  RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 101
Query: 67  XYVHC--DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
             + C  DV  E+ I  AV  A+ ++G +DI+ NNA  +     N LD      + ++++
Sbjct: 102 KALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLT--NTLDTPTKRLDLMMNV 159
Query: 125 NLVGAFL 131
           N  G +L
Sbjct: 160 NTRGTYL 166

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/248 (21%), Positives = 94/248 (37%), Gaps = 27/248 (10%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L  ++ L+TG + GIG   A  ++++GA V++    ++    V   I            +
Sbjct: 12  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 71
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
                  +D +         Y +LD + +NAG + +V P + + D   ++ ++ +N+   
Sbjct: 72  DLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP-MSEQDPQVWQDVMQVNVNAT 130
Query: 130 FLGRN---------------MLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F+                        G  G A   AY +SK    G+M+  A E  +  +
Sbjct: 131 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RL 189
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG 234
           RVNC++P    T +        D         LK     P D     L+L  D+S+  +G
Sbjct: 190 RVNCINPGGTRTAMRASAFPTEDP------QKLK----TPADIMPLYLWLMGDDSRRKTG 239
Query: 235 HNLVVDGG 242
                  G
Sbjct: 240 MTFDAQPG 247

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 106/264 (40%), Gaps = 41/264 (15%)
Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
           L GK  LI G A  R I    A+  S  GA++         GE+  K +           
Sbjct: 12  LYGKRGLILGLANNRSIAWGIAKTASSAGAELAFTY----QGEAXKKRVEPLAEEVKGFV 67
Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVD--EVKPNILDNDQAEFERILSIN 125
             HCDV+    I+   NT   ++GKLD + +  G  D  E+    +D  ++ F    +I+
Sbjct: 68  CGHCDVSDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVDISESNFXXTXNIS 127
Query: 126 L--VGAFLGRNMLLGVCGIIGGAATHAYTS-------------SKHGLLGLMKNTAVELG 170
           +  + A   R   L   G  G   T  Y               +K  L   +K  AV+LG
Sbjct: 128 VYSLTALTKRAEKLXSDG--GSILTLTYYGAEKVVPNYNVXGVAKAALEASVKYLAVDLG 185
Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKG--------AVLEPEDAAEAAL 222
              IRVN +S   + T        LA  G+G     LK           +  E+  ++AL
Sbjct: 186 PKHIRVNAISAGPIKT--------LAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSAL 237
Query: 223 YLGSDESKCVSGHNLVVDGGFAIV 246
           YL SD S+ V+G    VD G+ I+
Sbjct: 238 YLLSDLSRSVTGEVHHVDSGYNII 261

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 95/257 (36%), Gaps = 27/257 (10%)
Query: 1   MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXX 60
           MH       L  ++ L+TG + GIG   A  ++++GA V++    ++    V   I    
Sbjct: 1   MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET 60
Query: 61  XXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFER 120
                   +       ++ +         Y +LD + +NAG + +V P    N Q  ++ 
Sbjct: 61  GRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQV-WQD 119
Query: 121 ILSINLVGAFLGRN---------------MLLGVCGIIGGAATHAYTSSKHGLLGLMKNT 165
           ++ +N+   F+                        G  G A   AY +SK    G+M+  
Sbjct: 120 VMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVL 179
Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG 225
           A E  +  +RVNC++P    T +        D         LK     P D     L+L 
Sbjct: 180 ADEYQQ-RLRVNCINPGGTRTAMRASAFPTEDP------QKLK----TPADIMPLYLWLM 228
Query: 226 SDESKCVSGHNLVVDGG 242
            D+S+  +G       G
Sbjct: 229 GDDSRRKTGMTFDAQPG 245

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 93/253 (36%), Gaps = 35/253 (13%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIAD----IKDDLGESVCKDIXXXXXXXXX 65
           L GK   ITG +RGIG   A   ++ GA V IA         L  ++             
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 66  XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              + CD+ +E  +  AV   V  +G +DI+ NNA  +       LD     F+    +N
Sbjct: 64  GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI--WLRGTLDTPXKRFDLXQQVN 121
Query: 126 LVGAFLGRNMLL------------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
             G+F+     L                   +     GA T  YT +K G   +    A 
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHT-GYTLAKXGXSLVTLGLAA 180
Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD 227
           E G  G+ +N + P  V          +A D +  +      A   PE  A+AA  + + 
Sbjct: 181 EFGPQGVAINALWPRTV----------IATDAINXLPGVDAAACRRPEIXADAAHAVLTR 230
Query: 228 ESKCVSGHNLVVD 240
           E+    G  L+ D
Sbjct: 231 EAAGFHGQFLIDD 243

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/248 (20%), Positives = 89/248 (35%), Gaps = 26/248 (10%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           LQ ++ L+TG + GIG   A  ++++GA V++    ++    V + I            +
Sbjct: 13  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 72
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
                  ++     +     Y +LD + +NAG + E+ P   + D   ++ +  +N+   
Sbjct: 73  DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPXS-EQDPQIWQDVXQVNVNAT 131
Query: 130 FLGRN---------------MLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F                         G  G A   AY +SK    G  +  A E     +
Sbjct: 132 FXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGXXQVLADEYQNRSL 191
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG 234
           RVNC++P    T          D         LK     P D     L+L  D+S+  +G
Sbjct: 192 RVNCINPGGTRTSXRASAFPTEDP------QKLK----TPADIXPLYLWLXGDDSRRKTG 241
Query: 235 HNLVVDGG 242
                  G
Sbjct: 242 XTFDAQPG 249

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 22/197 (11%)
Query: 11  QGKVALITGGARGIGECTARLFSKHGAKV-LIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           Q  +A+ITG ++GIG   A   +  G +V LIA  K +L E V  +I            +
Sbjct: 6   QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNL-EKVHDEIXRSNKHVQEPIVL 64
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTV-DEVKPNILDNDQAEFERILSINLVG 128
             D+T     +  +     +YG +DI+ N A    D      +DN    F +I  IN++ 
Sbjct: 65  PLDITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPVDN----FRKIXEINVIA 120
Query: 129 AFLGRNMLLGVC-----GIIGGAATHA----------YTSSKHGLLGLMKNTAVELGRFG 173
            +     +  +      G I   A+ A          Y S+K  LLGL ++   EL   G
Sbjct: 121 QYGILKTVTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLG 180
Query: 174 IRVNCVSPYAVSTPLAK 190
           IRV  + P  V+T  AK
Sbjct: 181 IRVTTLCPGWVNTDXAK 197

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 24/173 (13%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           K+A++TG   G+G   A   +  G  V +A  + D  +    +I            V  D
Sbjct: 29  KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALC------VPTD 82
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG 132
           VT    +       V ++G++D++FNNAGT     P   D   A++++++  NL G FL 
Sbjct: 83  VTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPX-EDLTFAQWKQVVDTNLTGPFLC 141
Query: 133 RNMLLGVC-------------GIIGGAATH----AYTSSKHGLLGLMKNTAVE 168
                 V              G I   +       YT++KH + GL K+T+++
Sbjct: 142 TQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLD 194

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 97/238 (40%), Gaps = 43/238 (18%)
Query: 14  VALITGGARGIGECTARLFSKHGAKVL--------IADIKDDLGESVCKDIXXXXXXXXX 65
           + L+TG   G GEC  R F + G KV+        + ++KD+LG+++             
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNL------------- 48
Query: 66  XXYV-HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
             Y+   DV     IE  + +   ++  +DI+ NNAG    ++P        ++E ++  
Sbjct: 49  --YIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEP-AHKASVEDWETMIDT 105
Query: 125 NLVG-AFLGRNMLLGVC----------GIIGGAATHA----YTSSKHGLLGLMKNTAVEL 169
           N  G  ++ R +L G+           G   G+  +A    Y ++K  +     N   +L
Sbjct: 106 NNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDL 165
Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG-GMYSNLKGAVLEPEDAAEAALYLGS 226
               +RV  + P  V      +     DDG     Y N     L PED +EA  ++ +
Sbjct: 166 HGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNT--VALTPEDVSEAVWWVST 221

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 33/217 (15%)
Query: 5   LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXX 64
           + L+   G+ A +TGGA G+G    R     G KV IADI+ D   S+ K +        
Sbjct: 1   MSLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQD---SIDKALATLEAEGS 57
Query: 65  XXXY--VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL 122
                 V  DV   +  + A +    ++G + I+ NNAG V+  +P I ++   +++ +L
Sbjct: 58  GPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAG-VNLFQP-IEESSYDDWDWLL 115
Query: 123 SINLVGAFLGRNMLL---------------------GVCGIIGGAATHAYTSSKHGLLGL 161
            +NL G   G    +                      +   +   +   Y ++K  + GL
Sbjct: 116 GVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGL 175
Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD 198
            ++    L ++ I V+ + P      L K ++  +DD
Sbjct: 176 SESLHYSLLKYEIGVSVLCP-----GLVKSYIYASDD 207

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+ KVA+ITG +RGIGE  AR  ++ G  + +     D  E +  ++           Y 
Sbjct: 22  LEMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHEL--MQEQGVEVFYH 79
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG 101
           H DV+K + +E      + ++G +D++  NAG
Sbjct: 80  HLDVSKAESVEEFSKKVLERFGDVDVVVANAG 111

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 115/254 (45%), Gaps = 22/254 (8%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           +QGK+A++T G+ G+G  +A   +++GA++L+     +  E+    I            V
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVD-IV 63
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN---- 125
             D+ +  DI+     A    G   ++++  G        +   D  E  R+L+ +    
Sbjct: 64  AGDIREPGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWV 123
Query: 126 -------LVGAFLGRNMLLGVCGIIGGAATHAYTS-SKHGLLGLMKNTAVELGRFGIRVN 177
                  +V    GR + +G   ++      A ++  +  ++G+++  A+EL   G+ VN
Sbjct: 124 GRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVN 183
Query: 178 CVSPYAVST----PLAKDFLKLA----DDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDE 228
            V P  + T     LA++  + +    ++ L  M S +  G V +PE+ A    +L S++
Sbjct: 184 AVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEK 243
Query: 229 SKCVSGHNLVVDGG 242
           +  ++G  + VDGG
Sbjct: 244 ASFITGAVIPVDGG 257

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 22/229 (9%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           LQGKVALITG + GIGE TAR  +  GA V IA  + +   ++  ++            +
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDEL---TAAGAKVHVL 61
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG- 128
             DV   + ++ AV + V   G LDI+ NNAG +  + P + D D  ++ R +  NL+G 
Sbjct: 62  ELDVADRQGVDAAVASTVEALGGLDILVNNAG-IXLLGP-VEDADTTDWTRXIDTNLLGL 119
Query: 129 AFLGRNMLL-------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
            +  R  L               + G +       Y ++K G+    +    E+   G+R
Sbjct: 120 XYXTRAALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVR 179
Query: 176 VNCVSPYAVSTPLAKDFLKLA-DDGLGGMYSNLKGAVLEPEDAAEAALY 223
           V  + P    T L       A  +      S ++   L+ +D AEA  Y
Sbjct: 180 VVVIEPGTTDTELRGHITHTATKEXYEQRISQIRK--LQAQDIAEAVRY 226

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 106/259 (40%), Gaps = 27/259 (10%)
Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXX 65
           M   L+GK  LITG ++GIG  TARLF++ GAKV +   K     ++ + I         
Sbjct: 1   MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAP--ANIDETIASMRADGGD 58
Query: 66  XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             +   D+   +  +  V+  V ++G +D++ NNAG +   KP + + D   ++ ++  N
Sbjct: 59  AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKP-LPEIDDTFYDAVMDAN 117
Query: 126 LVGAFLGRNMLLGVCGIIGGAA--THAYTSS-------------------KHGLLGLMKN 164
           +    +     L        A+  T A  S+                   K  L  + KN
Sbjct: 118 IRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKN 177
Query: 165 TAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL 224
                 + G+R N VSP  V T    D  +   D +        G     E+ A A L+ 
Sbjct: 178 WVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIP--MGRFGTAEEMAPAFLFF 235
Query: 225 GSD-ESKCVSGHNLVVDGG 242
            S   S  ++G  L ++GG
Sbjct: 236 ASHLASGYITGQVLDINGG 254

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
           KVA+ITG +RGIGE  AR  ++ G  + +     D  E +  ++           Y H D
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHEL--MQEQGVEVFYHHLD 60
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAG 101
           V+K + +E      + ++G +D++  NAG
Sbjct: 61  VSKAESVEEFSKKVLERFGDVDVVVANAG 89

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 94/258 (36%), Gaps = 35/258 (13%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCD 72
            VA++TGG RGIG   AR  +  G  + I  I D   E V   I           ++  D
Sbjct: 30  PVAIVTGGRRGIGLGIARALAASGFDIAITGIGD--AEGVAPVIAELSGLGARVIFLRAD 87
Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG 132
           +      +  V+  V ++G++D + NNAG    V+ + LD     F+ I+ +NL G    
Sbjct: 88  LADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFF 147
Query: 133 RNMLL------------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
              +L                   V  +        Y  SK GL    +  A+ L   GI
Sbjct: 148 TQAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGLALRLAETGI 207
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-------EPEDAAEAALYLGSD 227
            V  V P  + +             + G Y  L  + L       EPED       L   
Sbjct: 208 AVFEVRPGIIRSDXTA--------AVSGKYDGLIESGLVPXRRWGEPEDIGNIVAGLAGG 259
Query: 228 ESKCVSGHNLVVDGGFAI 245
           +    +G  +  DGG +I
Sbjct: 260 QFGFATGSVIQADGGLSI 277

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 89/248 (35%), Gaps = 27/248 (10%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L  ++ L+TG + GIG   A  ++++GA V++    ++    V   I            +
Sbjct: 31  LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 90
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
                  ++ +      V  Y +LD + +NAG + +V P    N Q  ++ +  IN+   
Sbjct: 91  DLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXSEQNPQV-WQDVXQINVNAT 149
Query: 130 FLGRN---------------MLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F                         G  G A   AY +SK    G  +  A E  +  +
Sbjct: 150 FXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEYQQR-L 208
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG 234
           RVNC++P    T          D         LK     P D     L+L  D+S+  +G
Sbjct: 209 RVNCINPGGTRTAXRASAFPTEDP------QKLK----TPADIXPLYLWLXGDDSRRKTG 258
Query: 235 HNLVVDGG 242
                  G
Sbjct: 259 XTFDAQPG 266

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/249 (21%), Positives = 90/249 (36%), Gaps = 27/249 (10%)
Query: 1   MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXX 60
           MH       L  ++ L+TG + GIG   A  ++++GA V++    ++    V   I    
Sbjct: 1   MHYQPKQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEET 60
Query: 61  XXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFER 120
                   +       ++ +         Y +LD + +NAG + +V P    N Q  ++ 
Sbjct: 61  GRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPXSEQNPQV-WQD 119
Query: 121 ILSINLVGAFLGRN---------------MLLGVCGIIGGAATHAYTSSKHGLLGLMKNT 165
           +  +N+   F                         G  G A   AY +SK    G  +  
Sbjct: 120 VXQVNVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVL 179
Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG 225
           A E  +  +RVNC++P    T +        D         LK     P D     L+L 
Sbjct: 180 ADEYQQ-RLRVNCINPGGTRTAMRASAFPTEDP------QKLK----TPADIXPLYLWLX 228
Query: 226 SDESKCVSG 234
            D+S+  +G
Sbjct: 229 GDDSRRKTG 237

>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space Group P21 Length = 261

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 103/266 (38%), Gaps = 51/266 (19%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+GK ALIT G +G G  T  LF + GA+VL         E + +++           +V
Sbjct: 9   LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARP--EGLPEEL-----------FV 55
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             D+T ++           + G +D++ +  G               ++   LS+NL  A
Sbjct: 56  EADLTTKEGCAIVAEATRQRLGGVDVIVHXLGGSSAAGGGFSALSDDDWYNELSLNLFAA 115
Query: 130 F-LGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAV-----------------ELGR 171
             L R ++        G   H   +S   +L L ++T                   E+  
Sbjct: 116 VRLDRQLVPDXVARGSGVVVH--VTSIQRVLPLPESTTAYAAAKAALSTYSKAXSKEVSP 173
Query: 172 FGIRVNCVSPYAVSTP----LAKDFLKLA-----------DDGLGGMYSNLKGAVLEPED 216
            G+RV  VSP  + T     LA+   K A            DGLGG+     G   +PE+
Sbjct: 174 KGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIXDGLGGIP---LGRPAKPEE 230
Query: 217 AAEAALYLGSDESKCVSGHNLVVDGG 242
            A    +L SD +  ++G    +DGG
Sbjct: 231 VANLIAFLASDRAASITGAEYTIDGG 256

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/250 (22%), Positives = 103/250 (41%), Gaps = 23/250 (9%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           +  ++A +TGG  GIG    +   K G +V +A    +    V K +             
Sbjct: 11  MSQRIAYVTGGMGGIGTSICQRLHKDGFRV-VAGCGPNSPRRV-KWLEDQKALGFDFYAS 68
Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             +V      + A +    + G++D++ NNAG   +V    +  +  +++ ++  NL   
Sbjct: 69  EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTRE--DWQAVIDTNLTSL 126
Query: 130 F--------------LGRNM-LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F               GR + +  V G  G      Y+++K G+ G   + A E+   G+
Sbjct: 127 FNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGV 186
Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKCVS 233
            VN VSP  + T + K    +  D L  + + +    L  P++      +L S+ES   +
Sbjct: 187 TVNTVSPGYIGTDMVK---AIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFST 243
Query: 234 GHNLVVDGGF 243
           G +  ++GG 
Sbjct: 244 GADFSLNGGL 253

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG---GMYSN 206
           AY  SK+ L   ++  A   G  G+R+N ++P A  TPL +  L+  D   G     +  
Sbjct: 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ--DPRYGESIAKFVP 211
Query: 207 LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGF 243
             G   EP + A    +L S  +  V G  +V+DGG 
Sbjct: 212 PMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 107/270 (39%), Gaps = 49/270 (18%)
Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY 68
           +L+GK AL+TG   GIG+  A      GA VLI   +++      K+I            
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN--- 125
           V  D+  E+  ++ +     +Y K+DI+ NN G  + V+    D    ++ ++  +N   
Sbjct: 67  V-ADLGTEQGCQDVIE----KYPKVDILINNLGIFEPVE--YFDIPDEDWFKLFEVNIXS 119
Query: 126 ---LVGAFL--------GRNMLLGVCGIIGGAATHA-YTSSKHGLLGLMKNTAVELGRFG 173
              L  ++L        GR + +     I  +   A Y+++K   L L ++ A       
Sbjct: 120 GVRLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTGTN 179
Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE-------------------- 213
           + VN + P +  T       +  +  L  +Y N +  + E                    
Sbjct: 180 VTVNTIXPGSTLT-------EGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRLIR 232
Query: 214 PEDAAEAALYLGSDESKCVSGHNLVVDGGF 243
           PE+ A    +L S  S  ++G  L +DGG 
Sbjct: 233 PEEIAHLVTFLSSPLSSAINGSALRIDGGL 262

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 109/257 (42%), Gaps = 37/257 (14%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIA--DIKDDLGESVCKDIXXXXXXXXXXX 67
           L+ KV +I GG + +G  TA+ F+     +++     KD    +  KD            
Sbjct: 9   LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKD--ELEDQGAKVA 66
Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
               D++ E+++    + A  ++GK+DI  N  G V  +K  I++  +AEF+ + +IN  
Sbjct: 67  LYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKV--LKKPIVETSEAEFDAMDTINNK 124
Query: 128 GAFL-----GRNM-----LLGVCGIIGGAATHAYTS---SKHGLLGLMKNTAVELGRFGI 174
            A+       ++M     ++ +   +  A T  Y++   +K  +    +  + EL +  I
Sbjct: 125 VAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQI 184
Query: 175 RVNCVSP--------YAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS 226
            VN ++P        Y   T  +  F K     +G   + +       ED A    +L +
Sbjct: 185 SVNAIAPGPMDTSFFYGQETKESTAFHK--SQAMGNQLTKI-------EDIAPIIKFLTT 235
Query: 227 DESKCVSGHNLVVDGGF 243
           D    ++G  +  +GG+
Sbjct: 236 D-GWWINGQTIFANGGY 251

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 148 TH-AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSN 206
           TH AY  SK+ +  L +   V+    G+R+N V+P AV TPL +     AD   G     
Sbjct: 149 THLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ--ASKADPRYGESTRR 206
Query: 207 LKGAV---LEPEDAAEAALYLGSDESKCVSGHNLVVDGGF 243
               +    EP + AEA  +L   ++  + G  L VDGG 
Sbjct: 207 FVAPLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGM 246

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 102/264 (38%), Gaps = 41/264 (15%)
Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
           LQGK  LI G A  R I    A+   + GA++         G+++ K +           
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTY----QGDALKKRVEPLAEELGAFV 84
Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG--TVDEVKPNILDNDQAEFER--ILS 123
             HCDV     I+    T   ++GKLD + +  G    DE+    +D  +A F    ++S
Sbjct: 85  AGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLIS 144
Query: 124 INLVGAFLGRNMLLGVCGIIGGAATHAYTS-------------SKHGLLGLMKNTAVELG 170
           +  + A   R   L   G  G   T  Y               +K  L   +K  AV+LG
Sbjct: 145 VYSLTAVSRRAEKLMADG--GSILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAVDLG 202
Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKG--------AVLEPEDAAEAAL 222
              IRVN +S   + T        LA  G+G     LK           +  ++  +  L
Sbjct: 203 PQNIRVNAISAGPIKT--------LAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGL 254
Query: 223 YLGSDESKCVSGHNLVVDGGFAIV 246
           Y  SD S+ V+G     D G+ ++
Sbjct: 255 YFLSDLSRSVTGEVHHADSGYHVI 278

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 92/242 (38%), Gaps = 40/242 (16%)
Query: 14  VALITGGARGIGECTARLFSKHGAK--------VLIADIKDDLGESVCKDIXXXXXXXXX 65
           + LITG  +GIG   A  F++            VL +    DL E +  +          
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADL-EKISLECRAEGALTDT 62
Query: 66  XXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              +  D++   D+       V +YG +D + NNAG V      + D  + +F+  ++ N
Sbjct: 63  ---ITADISDMADVRRLTTHIVERYGHIDCLVNNAG-VGRFG-ALSDLTEEDFDYTMNTN 117
Query: 126 LVGAFLGRNMLLG---------VCGIIGGAATHA------YTSSKHGLLGLMKNTAVELG 170
           L G F     L           +  I   AAT A      Y  SK G  GL++   +   
Sbjct: 118 LKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYAR 177
Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
           +  +R+  V P AV TP+            G +   ++  ++ PED A   +      S+
Sbjct: 178 KCNVRITDVQPGAVYTPM-----------WGKVDDEMQALMMMPEDIAAPVVQAYLQPSR 226
Query: 231 CV 232
            V
Sbjct: 227 TV 228

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG-GMYSNLKG 209
           YT +K  L GL ++ A+EL    IRVN VSP     P    F    D      +Y     
Sbjct: 195 YTMAKEALEGLTRSAALELASLQIRVNGVSPGLSVLPDDMPFSVQEDYRRKVPLYQRNSS 254
Query: 210 AVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA 248
           A    E+ ++  ++L S ++K ++G  + VDGG+++  A
Sbjct: 255 A----EEVSDVVIFLCSPKAKYITGTCIKVDGGYSLTRA 289

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 26/178 (14%)
Query: 11  QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVH 70
           +G++AL+TGG  G+G   A+  S  G  V+I   + D+ ++   +I            V 
Sbjct: 32  EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRA--VV 89
Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFER---ILSINLV 127
           CDV     +         ++ +LD++ NNAG+   V P  L  ++  FE+   I++ NL 
Sbjct: 90  CDVGDPDQVAALFAAVRAEFARLDLLVNNAGS--NVPPVPL--EEVTFEQWNGIVAANLT 145
Query: 128 GAFL----------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
           GAFL                GR +  G +        +  YT++KH + GL K+TA++
Sbjct: 146 GAFLCTQHAFRXXKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALD 203

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 12  GKVALITGGARGIGECTAR-LFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVH 70
           GKV L+TG +RGIG+     LFS     V+    + +      K+            YV 
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKE-----KYGDRFFYVV 56
Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
            D+T++  ++  VN AV  +GK+D +  NAG ++ V+ N+ + D   ++++  IN 
Sbjct: 57  GDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQ-NVNEIDVNAWKKLYDINF 111

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 102/259 (39%), Gaps = 39/259 (15%)
Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYV 69
           L+G+ AL+TG +RGIG   A   +  GA V++  +K     +V + I             
Sbjct: 31  LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGD 90
Query: 70  HCDVTKEKD-IENA----------------VNTAVTQYGKLDIMF----NNAGTVDEVKP 108
             +     D IE A                +N  ++     D+ F    N   TVD ++ 
Sbjct: 91  LSEAGAGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQS 150
Query: 109 NILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
            +      ++ R++SI  +     ++++             AY ++K     L+++ A +
Sbjct: 151 ALPKMVARKWGRVVSIGSINQLRPKSVV------------TAYAATKAAQHNLIQSQARD 198
Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGG----MYSNLKGAVLEPEDAAEAALYL 224
                + +N ++P  V T    D  + A D  G        N  G    PE+   AAL+L
Sbjct: 199 FAGDNVLLNTLAPGLVDTDRNAD--RRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFL 256
Query: 225 GSDESKCVSGHNLVVDGGF 243
            S+    ++G  + + GG+
Sbjct: 257 ASEACSFMTGETIFLTGGY 275

>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 107/273 (39%), Gaps = 57/273 (20%)
Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
           L+G+  ++ G A  R I    AR   + GA+++     + L +SV +             
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHE--LAGTLDRNDSI 62
Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLD-----IMFNNAGTVDEVKPNILDNDQAEF---E 119
            + CDVT + +IE    +   Q G +      I F N    +E+    L+ ++  F    
Sbjct: 63  ILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANK---EELVGEYLNTNRDGFLLAH 119
Query: 120 RILSINLVG------------------AFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGL 161
            I S +L                     +LG  +++    ++G A        K  L   
Sbjct: 120 NISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVMGVA--------KASLDAS 171
Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKG--------AVLE 213
           +K  A +LG+  IRVN +S   + T  AK        G+    S LK             
Sbjct: 172 VKYLAADLGKENIRVNSISAGPIRTLSAK--------GISDFNSILKDIEERAPLRRTTT 223
Query: 214 PEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV 246
           PE+  + A +L SD S+ ++G NL VD GF I 
Sbjct: 224 PEEVGDTAAFLFSDMSRGITGENLHVDSGFHIT 256

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 97/258 (37%), Gaps = 39/258 (15%)
Query: 13  KVALITGGARGIGECTARLFSKHGAKV--LIADIKD--DLGESVCKDIXXXXXXXXXXXY 68
           K  ++TGG RGIG    R  +  GA V  +     D  ++ E V K+             
Sbjct: 15  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKA------ 68
Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
             CDV+    +   +       G +  +  NAG V  VKP   +    +F  +  +N+ G
Sbjct: 69  YQCDVSNTDIVTKTIQQIDADLGPISGLIANAG-VSVVKP-ATELTHEDFAFVYDVNVFG 126
Query: 129 AF----------LGR-------------NMLLGVCGIIGGAATHAYTSSKHGLLGLMKNT 165
            F          L +             + ++    + G      Y SSK     L+K  
Sbjct: 127 VFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGL 186
Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYL 224
           A E    GIRVN +SP  V+T       K   D      SN+      +PE+    A+ L
Sbjct: 187 AAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQA---SNIPLNRFAQPEEMTGQAILL 243
Query: 225 GSDESKCVSGHNLVVDGG 242
            SD +  ++G    +DGG
Sbjct: 244 LSDHATYMTGGEYFIDGG 261

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGA 210
           YT +K  L GL ++ A+EL    IRVN V P             LADD    +  + +  
Sbjct: 194 YTMAKGALEGLTRSAALELAPLQIRVNGVGP---------GLSVLADDMPPAVREDYRSK 244
Query: 211 V-LEPEDAAEA-----ALYLGSDESKCVSGHNLVVDGGFAIVNA 248
           V L   D++ A      ++L S ++K V+G  + VDGG+++  A
Sbjct: 245 VPLYQRDSSAAEVSDVVIFLCSSKAKYVTGTCVKVDGGYSLTRA 288

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 109/269 (40%), Gaps = 49/269 (18%)
Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
           LQGK  ++ G A  R I    AR     GAK++     + L  +V +             
Sbjct: 4   LQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRE--LADTLEGQESL 61
Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLD-----IMFNNAGTVDEVKPNILDNDQAEFERIL 122
            + CDVT ++++     T   + G +      I F N    D++K   +D  +  F  +L
Sbjct: 62  VLPCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANR---DDLKGEFVDTSRDGF--LL 116
Query: 123 SINLVGAFL-------------GRNMLLGVCGIIGGAAT----HAYTSSKHGLLGLMKNT 165
           + N+    L             G N+L      +GG       +    +K  L   +K  
Sbjct: 117 AQNISAFSLTAVAREAKKVMTEGGNIL--TLTYLGGERVVKNYNVMGVAKASLEASVKYL 174
Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--------GAVLEPEDA 217
           A +LG+ GIRVN +S   + T  AK        G+G   S L+              E+ 
Sbjct: 175 ANDLGQHGIRVNAISAGPIRTLSAK--------GVGDFNSILREIEERAPLRRTTTQEEV 226
Query: 218 AEAALYLGSDESKCVSGHNLVVDGGFAIV 246
            + A++L SD ++ V+G N+ VD G+ I+
Sbjct: 227 GDTAVFLFSDLARGVTGENIHVDSGYHIL 255

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 109/269 (40%), Gaps = 49/269 (18%)
Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX 67
           LQGK  ++ G A  R I    AR     GAK++     + L  +V +             
Sbjct: 4   LQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRE--LADTLEGQESL 61
Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLD-----IMFNNAGTVDEVKPNILDNDQAEFERIL 122
            + CDVT ++++     T   + G +      I F N    D++K   +D  +  F  +L
Sbjct: 62  VLPCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANR---DDLKGEFVDTSRDGF--LL 116
Query: 123 SINLVGAFL-------------GRNMLLGVCGIIGGAAT----HAYTSSKHGLLGLMKNT 165
           + N+    L             G N+L      +GG       +    +K  L   +K  
Sbjct: 117 AQNISAFSLTAVAREAKKVMTEGGNIL--TLTYLGGERVVKNYNVMGVAKASLEASVKYL 174
Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--------GAVLEPEDA 217
           A +LG+ GIRVN +S   + T  AK        G+G   S L+              E+ 
Sbjct: 175 ANDLGQHGIRVNAISAGPIRTLSAK--------GVGDFNSILREIEERAPLRRTTTQEEV 226
Query: 218 AEAALYLGSDESKCVSGHNLVVDGGFAIV 246
            + A++L SD ++ V+G N+ VD G+ I+
Sbjct: 227 GDTAVFLFSDLARGVTGENIHVDSGYHIL 255

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	257
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-110
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	4e-93
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-83
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-82
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-81
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	1e-80
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-80
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-78
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	4e-78
4dqx_A	277	Probable oxidoreductase protein; structural genomi	4e-77
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	7e-77
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	3e-76
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-75
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-75
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	6e-74
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	2e-72
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-72
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	3e-72
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	5e-72
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	5e-72
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	9e-71
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	3e-70
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-70
1spx_A	278	Short-chain reductase family member (5L265); paral	9e-70
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	4e-69
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	6e-69
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	4e-68
4e4y_A	244	Short chain dehydrogenase family protein; structur	4e-68
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	7e-68
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	8e-68
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	3e-67
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	4e-67
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-66
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-66
1xkq_A	280	Short-chain reductase family member (5D234); parra	3e-66
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	3e-66
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	4e-66
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	4e-64
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-63
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-63
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	8e-63
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-62
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-62
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-62
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	6e-62
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-61
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	5e-61
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	9e-61
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	2e-60
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-60
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-59
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	3e-59
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	3e-59
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-59
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	9e-59
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	1e-58
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-58
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-58
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-58
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	5e-58
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	5e-58
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	7e-58
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-57
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	2e-57
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	7e-57
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	8e-57
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-56
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	3e-56
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	6e-56
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-55
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	1e-54
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	1e-54
1xq1_A	266	Putative tropinone reducatse; structural genomics,	4e-54
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	6e-54
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	6e-54
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	7e-54
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-53
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-53
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	6e-53
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	8e-53
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-52
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-52
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	3e-52
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	7e-52
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-51
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-51
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-51
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	3e-51
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	3e-51
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	3e-51
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	4e-51
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	4e-51
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	8e-51
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	9e-51
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	9e-51
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	1e-50
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-50
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	4e-49
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	6e-49
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	6e-49
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-48
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	1e-48
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-48
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	3e-48
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	8e-48
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	1e-47
3rih_A	293	Short chain dehydrogenase or reductase; structural	2e-47
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	4e-47
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-46
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-46
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-46
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	3e-46
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	4e-46
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	8e-46
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	9e-46
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-45
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-45
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-45
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	6e-45
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	7e-45
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-44
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-44
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	2e-44
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-44
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	2e-44
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	3e-44
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	4e-44
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	8e-44
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-43
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	4e-43
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	7e-43
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-42
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	2e-42
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	4e-42
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	6e-42
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	1e-41
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	2e-41
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-41
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	3e-41
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	3e-41
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	3e-41
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	3e-41
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	6e-41
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	7e-41
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	8e-41
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-41
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	1e-40
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-40
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	2e-40
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-40
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	5e-40
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-39
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	7e-39
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-38
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-38
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-38
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	2e-38
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-38
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-32
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	5e-38
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-37
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	2e-37
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	5e-37
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-36
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	6e-36
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-35
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	5e-35
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	7e-35
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	3e-32
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	4e-32
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-30
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	3e-30
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	7e-29
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	8e-29
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	1e-28
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-28
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	3e-27
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	1e-25
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-24
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-23
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	3e-23
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	2e-20
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	4e-20
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	7e-19
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	8e-19
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	2e-05
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-18
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	2e-14
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	3e-14
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	3e-14
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	6e-14
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	6e-14
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	7e-14
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	9e-14
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	1e-13
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	2e-13
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	5e-13
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	8e-12
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	3e-11
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	3e-11
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	5e-11
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	2e-09
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	8e-04
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	3e-09
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	4e-07
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	4e-04

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  319 bits (819), Expect = e-110
 Identities = 120/264 (45%), Positives = 161/264 (60%), Gaps = 23/264 (8%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
              RLQ KVA+ITGGA GIGE TA+LF ++GAKV+IADI DD G+ VC +IGS       
Sbjct: 10  STNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS----PDV 65

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
            S+VHCDVTK++D+ N V+T + ++GKLDIMF N G +     +IL+    +F+R++ IN
Sbjct: 66  ISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDIN 125

Query: 126 LVGAFLG-----RNMLLG----------VCGIIGGAA-THAYTSSKHGLLGLMKNTAVEL 169
           + GAFL      R M+            +     G   +H YT++KH +LGL  +   EL
Sbjct: 126 VYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTEL 185

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY---SNLKGAVLEPEDAAEAALYLGS 226
           G +GIRVNCVSPY V++PL  D   +    +  +    +NLKG +L  ED A+A  YL  
Sbjct: 186 GEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAG 245

Query: 227 DESKCVSGHNLVVDGGFAIVNAGF 250
           DESK VSG NLV+DGG+   N  F
Sbjct: 246 DESKYVSGLNLVIDGGYTRTNPAF 269

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  274 bits (702), Expect = 4e-93
 Identities = 94/253 (37%), Positives = 132/253 (52%), Gaps = 30/253 (11%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M  RL GKVAL++GGARG+G    R     GAKV+  DI D+ G+++  ++  +      
Sbjct: 1   MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA------ 54

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             YVH DVT+    + AV+TAVT +G L ++ NNAG ++     I D    E++RIL +N
Sbjct: 55  ARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNI--GTIEDYALTEWQRILDVN 112

Query: 126 LVGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           L G FLG     + M             + G+ G  A H YT++K  + GL K+TA+ELG
Sbjct: 113 LTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG 172

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
             GIRVN + P  V TP       + D     ++    G   EP + +   +YL SDES 
Sbjct: 173 PSGIRVNSIHPGLVKTP-------MTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESS 225

Query: 231 CVSGHNLVVDGGF 243
             +G   VVDGG 
Sbjct: 226 YSTGAEFVVDGGT 238

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  249 bits (639), Expect = 1e-83
 Identities = 70/254 (27%), Positives = 110/254 (43%), Gaps = 27/254 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RLQGKVAL+TGGA G+G    +L    GAKV  +DI +  G+ +  ++G          +
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER------SMF 56

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  DV+ E D    +     + G L+++ NNAG +  +  ++      +F R+L IN   
Sbjct: 57  VRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGIL--LPGDMETGRLEDFSRLLKINTES 114

Query: 129 AFLG-----RNMLLG---------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR--F 172
            F+G       M            V   +       Y++SK  +  L +  A+   +  +
Sbjct: 115 VFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGY 174

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK---GAVLEPEDAAEAALYLGSDES 229
            IRVN + P  + TP+ +  L         ++       G    PE  A+  L+L SDES
Sbjct: 175 AIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDES 234

Query: 230 KCVSGHNLVVDGGF 243
             +SG  L  D   
Sbjct: 235 SVMSGSELHADNSI 248

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  246 bits (631), Expect = 2e-82
 Identities = 88/264 (33%), Positives = 124/264 (46%), Gaps = 28/264 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L GK  +ITGGARG+G   AR     GA+V++AD+ D+ G +  +++G +        Y
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA------ARY 55

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
            H DVT E+D +  V  A  ++G +D + NNAG        +       F +++ INL G
Sbjct: 56  QHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGI--STGMFLETESVERFRKVVEINLTG 113

Query: 129 AFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F+G       M               G++G A T +Y +SK G+ GL K  AVELG   
Sbjct: 114 VFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDR 173

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSN--LKGAVLEPEDAAEAALYLGSDESKC 231
           IRVN V P    TP+  +          G Y N  +     EP + A A + L SD S  
Sbjct: 174 IRVNSVHPGMTYTPMTAE---TGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSY 230

Query: 232 VSGHNLVVDGGFAIVNAGFSVFGK 255
           V+G  L VDGG+        V G+
Sbjct: 231 VTGAELAVDGGWTTGPTVKYVMGQ 254

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  244 bits (626), Expect = 2e-81
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 27/256 (10%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
              R  GKV ++TGG RGIG    R F   GA+V+I D  +  G ++ +++        G
Sbjct: 3   TGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-------G 55

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             ++ CDVT+E D++  V+  + ++G+LD + NNAG     +    +     F ++L +N
Sbjct: 56  AVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQR-PEETSAQGFRQLLELN 114

Query: 126 LVGAFLG-----RNMLLG---------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           L+G +         +            + G IG A    Y ++K  +  + K  A++   
Sbjct: 115 LLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESP 174

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----EPEDAAEAALYLGSD 227
           +G+RVNC+SP  + TPL ++   L  D    +   +    L    +P +   AA++L S+
Sbjct: 175 YGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE 234

Query: 228 ESKCVSGHNLVVDGGF 243
            +   +G  L+V GG 
Sbjct: 235 -ANFCTGIELLVTGGA 249

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  242 bits (621), Expect = 1e-80
 Identities = 87/270 (32%), Positives = 125/270 (46%), Gaps = 22/270 (8%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           ++ RL+GK+A++TG + GIG   A LF++ GAKV++     +    +  +I      A  
Sbjct: 2   VMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEA-- 59

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
            + +  DV  E   E  V  AV ++G LD  FNNAG +  +   I       +   L  N
Sbjct: 60  -AALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGE-ISSLSVEGWRETLDTN 117

Query: 126 LVGAFLG-----RNMLLG----------VCGIIGGAATH-AYTSSKHGLLGLMKNTAVEL 169
           L  AFL        +               G   G A    Y +SK GL+GL++  AVEL
Sbjct: 118 LTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVEL 177

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--GAVLEPEDAAEAALYLGSD 227
           G  GIRVN + P    TP     L  A     G    L     +  PE+ AEAALYL SD
Sbjct: 178 GARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASD 237

Query: 228 ESKCVSGHNLVVDGGFAIVNAGFSVFGKSE 257
            +  V+G  L+ DGG ++  A  +++ +S 
Sbjct: 238 GASFVTGAALLADGGASVTKAAENLYFQSH 267

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  242 bits (619), Expect = 3e-80
 Identities = 78/261 (29%), Positives = 121/261 (46%), Gaps = 28/261 (10%)

Query: 3   ANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSS 62
            ++    L GKVA++TG   GIG   AR  +  G  VL ADI  D  ++    IG     
Sbjct: 20  GSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCG--- 76

Query: 63  ASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL 122
               +    DV+ E+ I   V+  V  +G +D +  NAG V  +   ++D    +F+R++
Sbjct: 77  ---AAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAG-VVHLAS-LIDTTVEDFDRVI 131

Query: 123 SINLVGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
           +INL GA+L        M+            + G +    T AY  SK G++ L + TA 
Sbjct: 132 AINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAA 191

Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-----EPEDAAEAAL 222
           EL   GIR N + P  V TP+ +  + + D  LG   +    A L      PE+ A   +
Sbjct: 192 ELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVV 251

Query: 223 YLGSDESKCVSGHNLVVDGGF 243
           +L SD++  ++G   + DGG 
Sbjct: 252 FLLSDDASMITGTTQIADGGT 272

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  237 bits (607), Expect = 1e-78
 Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 23/259 (8%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
              R   +V LITGG  G+G  TA   +  GAK+ + D+  +  E+    +  ++  A  
Sbjct: 7   PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAE- 65

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
                 DV+ E  +E  V     ++G++D  FNNAG   +  P       AEF++++SIN
Sbjct: 66  VLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNP-TESFTAAEFDKVVSIN 124

Query: 126 LVGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           L G FLG     + M             V GI G      Y ++KHG++GL +N+AVE G
Sbjct: 125 LRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYG 184

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLG-GMYSNLKGAVL-----EPEDAAEAALYL 224
           R+GIR+N ++P A+ TP+ ++ +K  D                     E  + A    +L
Sbjct: 185 RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFL 244

Query: 225 GSDESKCVSGHNLVVDGGF 243
            SD++  V+   + +DGG 
Sbjct: 245 LSDDASYVNATVVPIDGGQ 263

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  236 bits (604), Expect = 4e-78
 Identities = 60/254 (23%), Positives = 107/254 (42%), Gaps = 24/254 (9%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M   L+ KVA+ITG   GIG  T+R+ ++ GA+V++AD+ +         +G        
Sbjct: 5   MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRG------ 58

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             +   D+T E  +   ++  +  +G+LDI+ NNA   D     +       ++   ++N
Sbjct: 59  AVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVN 118

Query: 126 LVGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
             G  L        ++                     + AY  +K  +  L +  A + G
Sbjct: 119 ARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYG 178

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYS-NLKGAVLEPEDAAEAALYLGSDES 229
           R G+R N ++P  V TP  +    L    +    + +L G + EP + AE   +L SD +
Sbjct: 179 RHGVRCNAIAPGLVRTPRLEVG--LPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRA 236

Query: 230 KCVSGHNLVVDGGF 243
             ++G  +  D G 
Sbjct: 237 AFITGQVIAADSGL 250

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  233 bits (598), Expect = 4e-77
 Identities = 80/258 (31%), Positives = 121/258 (46%), Gaps = 27/258 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L  +V ++TGG  GIG  TA LF+K+GA V++AD+ +D    V  +IGS          
Sbjct: 24  DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSK------AFG 77

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  DV+  KD E+ V     ++G++D++ NNAG        ++   +  ++RI+S+N+ G
Sbjct: 78  VRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAG-FGTTGN-VVTIPEETWDRIMSVNVKG 135

Query: 129 AFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            FL        M                    A   AY +SK  +  L +  A++  + G
Sbjct: 136 IFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEG 195

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----EPEDAAEAALYLGSDES 229
           IRVN V+P  + +P        A D           AV+      E+ AEA L+L SD S
Sbjct: 196 IRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRS 255

Query: 230 KCVSGHNLVVDGGFAIVN 247
           +  +G  L VDGG +I N
Sbjct: 256 RFATGSILTVDGGSSIGN 273

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  232 bits (594), Expect = 7e-77
 Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 21/256 (8%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           + L+ KV ++TG   GIG   A+ F+ + + V+  ++ +D    + +++           
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEV---L 59

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
            V  DV+K+KD+E  V      Y ++D++ NNAG +D V P + +     +ER+L++NL 
Sbjct: 60  GVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTP-VAEVSDELWERVLAVNLY 118

Query: 128 GAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            AF         ML            + GI GG A   YT +KHGL+GL ++ A   G  
Sbjct: 119 SAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQ 178

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--GAVLEPEDAAEAALYLGSDESK 230
           GIR   V P  V T +     K ++ G+  +   +     + EPED A   ++L SDE+ 
Sbjct: 179 GIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEAS 238

Query: 231 CVSGHNLVVDGGFAIV 246
            V+G  +VVDGG  ++
Sbjct: 239 FVNGDAVVVDGGLTVL 254

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  231 bits (591), Expect = 3e-76
 Identities = 80/258 (31%), Positives = 127/258 (49%), Gaps = 28/258 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L+GKVALITG   G GE  A+ F+K GAKV+I D      E V  +IG +         
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDA------ALA 59

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  D++KE D++ AV  A++++GK+DI+ NNAG   + +      +  EF+RI+ +N+ G
Sbjct: 60  VAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQN-AELVEPEEFDRIVGVNVRG 118

Query: 129 AFLG-----RNMLLG--------------VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
            +L       +                              Y ++K  ++ + K  A+EL
Sbjct: 119 VYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIEL 178

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--GAVLEPEDAAEAALYLGSD 227
               IRV  ++P A  TPL   F+    + +   + +    G +L+P+D AEAA +L S 
Sbjct: 179 APAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSP 238

Query: 228 ESKCVSGHNLVVDGGFAI 245
           ++  ++G  L VDGG +I
Sbjct: 239 QASMITGVALDVDGGRSI 256

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  229 bits (587), Expect = 1e-75
 Identities = 71/266 (26%), Positives = 112/266 (42%), Gaps = 41/266 (15%)

Query: 2   HANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSS 61
           H + M      KVA++TGG+ GIG        ++GAKV+   + +    +V         
Sbjct: 5   HHHHM-EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSD------- 56

Query: 62  SASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERI 121
                 +   DVT E++++ AV     +YG++DI+ NNAG +++  P +       + RI
Sbjct: 57  ------HFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAG-IEQYSP-LHLTPTEIWRRI 108

Query: 122 LSINLVGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTA 166
           + +N+ G++L        ML            V          AY +SKH LLGL ++ A
Sbjct: 109 IDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVA 168

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDA 217
           ++     IR N V P  + TP+     K+                           PE+ 
Sbjct: 169 IDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEV 227

Query: 218 AEAALYLGSDESKCVSGHNLVVDGGF 243
           AE   +L SD S  ++G  L VDGG 
Sbjct: 228 AEVVAFLASDRSSFITGACLTVDGGL 253

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  228 bits (584), Expect = 2e-75
 Identities = 79/253 (31%), Positives = 120/253 (47%), Gaps = 25/253 (9%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL GKVA+ITGG  GIG   A  F + GAKV+I     D+GE   K +G    +     +
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVG----TPDQIQF 58

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              D + E       +     +G +  + NNAG    V  ++ +   AE+ ++L++NL G
Sbjct: 59  FQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIA--VNKSVEETTTAEWRKLLAVNLDG 116

Query: 129 AFLG-----RNML---LG--------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR- 171
            F G     + M    LG        + G +G  +  AY +SK  +  + K+ A++    
Sbjct: 117 VFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALK 176

Query: 172 -FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
            + +RVN V P  + TPL  D    A++ +        G + EP D A   +YL S+ESK
Sbjct: 177 DYDVRVNTVHPGYIKTPLVDDLPG-AEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESK 235

Query: 231 CVSGHNLVVDGGF 243
             +G   VVDGG+
Sbjct: 236 FATGSEFVVDGGY 248

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  225 bits (577), Expect = 6e-74
 Identities = 65/257 (25%), Positives = 103/257 (40%), Gaps = 20/257 (7%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M    Q +  L+TGG  GIG+  A      GA V+I     D      +++ +  ++   
Sbjct: 5   MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGA 64

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             Y   D+T E +   AV+     +G+L  + + AG  + + P I   D   + R + +N
Sbjct: 65  IRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGP-ITQVDSEAWRRTVDLN 123

Query: 126 LVGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           + G         R M+ G          +          AY  +K  +  LM+  A ELG
Sbjct: 124 VNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELG 183

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--GAVLEPEDAAEAALYLGSDE 228
              +RVN + P  + T L           L   Y+         E ED A  A++L SD 
Sbjct: 184 ASWVRVNSIRPGLIRTDLVAAI--TESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDA 241

Query: 229 SKCVSGHNLVVDGGFAI 245
           +  V+G  + VDGG  +
Sbjct: 242 ASFVTGQVINVDGGQML 258

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  221 bits (566), Expect = 2e-72
 Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 33/266 (12%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M ++  GKV L+TG    IG  TA   ++ G  + + D+  +  E     +      A  
Sbjct: 1   MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARS 60

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
                CDVT E+ +   V++ V  +GK+D +FNNAG      P + D    +F R+L+IN
Sbjct: 61  ---YVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAP-VQDYPSDDFARVLTIN 116

Query: 126 LVGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           + GAF       R M+            + G+ G     AY +SK  ++ L +  A++L 
Sbjct: 117 VTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLA 176

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL--------------EPED 216
            + IRVN +SP  +      +        +G  Y +    V+              +  +
Sbjct: 177 PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINE 236

Query: 217 AAEAALYLGSDESKCVSGHNLVVDGG 242
                 +L  D+S  ++G NL + GG
Sbjct: 237 IPGVVAFLLGDDSSFMTGVNLPIAGG 262

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  222 bits (568), Expect = 2e-72
 Identities = 75/282 (26%), Positives = 121/282 (42%), Gaps = 43/282 (15%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M  R++GKVA +TG ARG G   A   ++ GA ++  DI   +   V      +S+    
Sbjct: 5   MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDL 64

Query: 66  -------------CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILD 112
                              DV     ++ AV++ V Q G+LDI+  NAG  +     +  
Sbjct: 65  AETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDT-LDK 123

Query: 113 NDQAEFERILSINLVGAFLG-----RNMLLG-----------VCGIIGGAATHAYTSSKH 156
             + ++  ++ INL G +        +M+ G           V G+     T  Y ++KH
Sbjct: 124 TSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKH 183

Query: 157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD-------------DGLGGM 203
           G++GLM+   VELG+  IRVN V P  V TP+  +                     +  M
Sbjct: 184 GVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQM 243

Query: 204 YSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI 245
           +  L    +EP D + A L+  SDE++ ++G  L +D G  +
Sbjct: 244 FHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  221 bits (565), Expect = 3e-72
 Identities = 71/265 (26%), Positives = 109/265 (41%), Gaps = 34/265 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
                VALITG   GIG  TA   +  G  V          E V  +I  +   A     
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQA---IA 81

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  DV+ E  + NAV   V ++G LDI+  NAG      P I D    E++  +++NL G
Sbjct: 82  LEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAP-IDDLKPFEWDETIAVNLRG 140

Query: 129 AFLG-----RNML---------------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
            FL        +                       G     AYT++K   + +++  A+E
Sbjct: 141 TFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGAT---AYTATKAAQVAIVQQLALE 197

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-------EPEDAAEAA 221
           LG+  IRVN V P A+ T ++ +     ++         KG V          ED AE  
Sbjct: 198 LGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELI 257

Query: 222 LYLGSDESKCVSGHNLVVDGGFAIV 246
            +L S+ ++ V+G  + +DGG  ++
Sbjct: 258 RFLVSERARHVTGSPVWIDGGQGLL 282

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  220 bits (564), Expect = 5e-72
 Identities = 68/264 (25%), Positives = 112/264 (42%), Gaps = 26/264 (9%)

Query: 1   MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSS 60
           ++   M +RL  K+A+ITG   GIG   A+ F   GA+V I   + D+ ++   +IG  +
Sbjct: 18  LYFQSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGA 77

Query: 61  SSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFER 120
                   +  D     +++        + G++D++F NAG    + P + +  + +++ 
Sbjct: 78  ------VGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAG-GGSMLP-LGEVTEEQYDD 129

Query: 121 ILSINLVGAFLG-----RNMLLG--------VCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
               N+ G           +  G          G  G  A   Y +SK  L    +N  +
Sbjct: 130 TFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWIL 189

Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-----EPEDAAEAAL 222
           +L   GIR+N +SP    T    +          G+ + L   V        E+ A AAL
Sbjct: 190 DLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAAL 249

Query: 223 YLGSDESKCVSGHNLVVDGGFAIV 246
           +L SD+S  V+G  L VDGG A V
Sbjct: 250 FLASDDSSFVTGAELFVDGGSAQV 273

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  219 bits (561), Expect = 5e-72
 Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 18/248 (7%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
            +VA++TG + G G   A  F   G +V   D+  +  E   +    +   A     V  
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY--ADKVLRVRA 59

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAF 130
           DV  E D+  A+   + Q+G +D++ NNAG T +     +      +F++++++N+ G F
Sbjct: 60  DVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIF 119

Query: 131 LG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
           LG      +MLL           V  ++      AYT+SK  +L L K+ AV+    GIR
Sbjct: 120 LGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIR 179

Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGH 235
            N V P  + TP+ +  L   +     +    +  +      A+A ++L  +++  V+G 
Sbjct: 180 CNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGA 239

Query: 236 NLVVDGGF 243
            LV+DG +
Sbjct: 240 ALVMDGAY 247

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  217 bits (554), Expect = 9e-71
 Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 41/261 (15%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L+ KV ++TG + GIG   A  F   G+KV+   I D                     +
Sbjct: 5   DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKY--------------DH 50

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           + CDVT    ++ +++    +YG + ++ NNAG ++     I      E+ RI+ +NL G
Sbjct: 51  IECDVTNPDQVKASIDHIFKEYGSISVLVNNAG-IESYGK-IESMSMGEWRRIIDVNLFG 108

Query: 129 AFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            +         M+            V   I      AY +SKH ++GL K+ A++     
Sbjct: 109 YYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-L 167

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAAEAALYL 224
           +R N V P  + TPL +   +L                          +P++ A A  +L
Sbjct: 168 LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFL 227

Query: 225 GSDESKCVSGHNLVVDGGFAI 245
            S E+  ++G  L VDGG +I
Sbjct: 228 ASREASFITGTCLYVDGGLSI 248

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  215 bits (551), Expect = 3e-70
 Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 27/260 (10%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M   L  KV +I+G    +G   AR  ++ GA +++A    +  E V K +  +   A  
Sbjct: 5   MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALS 64

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              V  D+T +  + + V+  +  YG++D++ NNA  V  +KP   +         + + 
Sbjct: 65  ---VGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKP-FANTTFEHMRDAIELT 120

Query: 126 LVGAFLG-----RNMLLG---------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           + GA          +            +      A   AY  +K  LL + +  A ELG 
Sbjct: 121 VFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGE 180

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAAEAAL 222
            GIRVN V P  +     K + +      G    ++  A             ++ A A L
Sbjct: 181 KGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAIL 240

Query: 223 YLGSDESKCVSGHNLVVDGG 242
           ++ SD +  ++G  L V+ G
Sbjct: 241 FMASDLASGITGQALDVNCG 260

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  215 bits (550), Expect = 3e-70
 Identities = 76/267 (28%), Positives = 120/267 (44%), Gaps = 35/267 (13%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
              GK  L+TGGARGIG   A+ F++ GA V + D++ +  E            A G ++
Sbjct: 3   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA---------EAIGGAF 53

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLV 127
              D+  E++    V  A    G++D++ NNA         + L     E+ R+L +NL 
Sbjct: 54  FQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPG---SALTVRLPEWRRVLEVNLT 110

Query: 128 GAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
                     R M             V G+       AY +SK GL+ L ++ A++L   
Sbjct: 111 APMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPL 170

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----EPEDAAEAALYLGSDE 228
            IRVN V+P A++T    + + L+ D             L    +PE+ AEA L+L S++
Sbjct: 171 RIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEK 230

Query: 229 SKCVSGHNLVVDGGFAIVNAGFSVFGK 255
           +  ++G  L VDGG     A F + G+
Sbjct: 231 ASFITGAILPVDGGMT---ASFMMAGR 254

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  215 bits (549), Expect = 9e-70
 Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 27/265 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           R   KVA+ITG + GIG  TA LF++ GAKV I     +  E   + I ++  S    + 
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 62

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG--TVDEVKPNILDNDQAEFERILSINL 126
           V  DVT +   +  ++T + ++GKLDI+ NNAG    D             ++  L++NL
Sbjct: 63  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 122

Query: 127 VGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
                       ++               G+        Y+ +K  +    +NTA++L +
Sbjct: 123 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 182

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL--------EPEDAAEAALY 223
            GIRVN +SP  V+T      + + ++     YS +             +P+D AE   +
Sbjct: 183 HGIRVNSISPGLVATGFGSA-MGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF 241

Query: 224 LGSDE-SKCVSGHNLVVDGGFAIVN 247
           L   + S  + GH LVVDGG +++ 
Sbjct: 242 LADRKTSSYIIGHQLVVDGGSSLIM 266

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  213 bits (545), Expect = 4e-69
 Identities = 62/263 (23%), Positives = 99/263 (37%), Gaps = 33/263 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           +L G+VALITGGA G+G      F   GA+V + D   +    +    G +         
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGN------AVG 55

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKP---NILDNDQAEFERILSIN 125
           V  DV   +D + A    +  +GK+D +  NAG  D          D   A F+ I  +N
Sbjct: 56  VVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVN 115

Query: 126 LVGAFLG-----RNMLLG---------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           + G           ++             G         YT++KH ++GL++  A EL  
Sbjct: 116 VKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP 175

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--------GAVLEPEDAAEAALY 223
             +RVN V+P  ++T L         +                  G +   E+   A ++
Sbjct: 176 -HVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVF 234

Query: 224 LGSDE-SKCVSGHNLVVDGGFAI 245
             +   S   +G  L  DGG  +
Sbjct: 235 FATRGDSLPATGALLNYDGGMGV 257

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  212 bits (543), Expect = 6e-69
 Identities = 77/272 (28%), Positives = 112/272 (41%), Gaps = 36/272 (13%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSS---- 61
           M  +L+G+VA ITG ARG G   A   +  GA ++  DI   L   V  D  S       
Sbjct: 5   MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSET 64

Query: 62  ----SASG--CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQ 115
                A+         D      +   V+  V   G+LDI+  NAG V   +    D   
Sbjct: 65  VRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAG-VAAPQA-WDDITP 122

Query: 116 AEFERILSINLVGAFLG-----RNMLLG-----------VCGIIGGAATHAYTSSKHGLL 159
            +F  ++ IN+ G +         ++ G             G+        YT+SKH + 
Sbjct: 123 EDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVT 182

Query: 160 GLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLK-------LADDGLGGMYSN-LKGAV 211
           GL +  A ELG+  IRVN V P  V+TP+    +          +  L  + +  L   V
Sbjct: 183 GLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWV 242

Query: 212 LEPEDAAEAALYLGSDESKCVSGHNLVVDGGF 243
            EPED A+   +L SDES+ V+   + VD G 
Sbjct: 243 AEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  210 bits (536), Expect = 4e-68
 Identities = 76/259 (29%), Positives = 116/259 (44%), Gaps = 26/259 (10%)

Query: 1   MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSS 60
            +++ +  RL GK A+ITG   GIG+  A  F+  GA V+++DI  D    V  +I    
Sbjct: 2   FNSDNL--RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG 59

Query: 61  SSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFER 120
             A       CD+T E+++    + A+++ GK+DI+ NNAG      P   D   A+F R
Sbjct: 60  GQAFA---CRCDITSEQELSALADFAISKLGKVDILVNNAGG---GGPKPFDMPMADFRR 113

Query: 121 ILSINLVGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNT 165
              +N+   F         M             +          +Y SSK     L++N 
Sbjct: 114 AYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNM 173

Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYL 224
           A +LG   IRVN ++P A+ T   K    +  +    M  +     + +P+D A AAL+L
Sbjct: 174 AFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTPIRRLGQPQDIANAALFL 231

Query: 225 GSDESKCVSGHNLVVDGGF 243
            S  +  VSG  L V GG 
Sbjct: 232 CSPAASWVSGQILTVSGGG 250

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  209 bits (535), Expect = 4e-68
 Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 40/257 (15%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSSSSSASGCSY 68
                 L+TGG++GIG+    L  ++    +I  DI+        K             +
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLK-------------F 48

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  D+TK++DI N ++    +    D +F NAG + +   +I D D    +++L +N+  
Sbjct: 49  IKADLTKQQDITNVLDII--KNVSFDGIFLNAGILIKG--SIFDIDIESIKKVLDLNVWS 104

Query: 129 AFLG-----RNMLLG--------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
           +         N+ +G            I    + AYT SK  +  + K+ A++L ++ IR
Sbjct: 105 SIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIR 164

Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAAEAALYLGS 226
           VN V P  V T L ++ ++   + +G  +   +             +P++ AE  ++L S
Sbjct: 165 VNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLS 224

Query: 227 DESKCVSGHNLVVDGGF 243
           D+SK ++G  + +DGG+
Sbjct: 225 DKSKFMTGGLIPIDGGY 241

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  210 bits (536), Expect = 7e-68
 Identities = 69/276 (25%), Positives = 111/276 (40%), Gaps = 36/276 (13%)

Query: 1   MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSS 60
           M A      LQG+VA ITG ARG G   A   +  GA ++  DI   +  SV     S  
Sbjct: 5   MVAGQA-GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPE 63

Query: 61  S--------SASG--CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNI 110
                       G        DV  +  +   V   + Q+G+LD++  NAG V      +
Sbjct: 64  DLDETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAG-VLSWGR-V 121

Query: 111 LDNDQAEFERILSINLVGAFLG-----RNMLLG-----------VCGIIGGAATHAYTSS 154
            +    +++ ++ +NL G +         M+               G+        Y++S
Sbjct: 122 WELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSAS 181

Query: 155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTP------LAKDFLKLADDGLGGMYSNLK 208
           KHGL  L    A+ELG +GIRVN + PY+V TP      + + F +            ++
Sbjct: 182 KHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQ 241

Query: 209 -GAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGF 243
               +  ++ A+   +L  D S  ++G  + VD G 
Sbjct: 242 PNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  209 bits (535), Expect = 8e-68
 Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 39/266 (14%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M   + GKVAL+TG A+GIG   A      GAKV + D   + G      +         
Sbjct: 1   MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQK- 59

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             ++ CDV  ++ + +     V  +G+LDI+ NNAG  +E            +E+ L IN
Sbjct: 60  TLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE----------KNWEKTLQIN 109

Query: 126 LVGAFLG-----RNML---LG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
           LV    G       M     G          + G++  A    Y +SKHG++G  ++ A+
Sbjct: 110 LVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAAL 169

Query: 168 --ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL------KGAVLEPEDAAE 219
              L   G+R+N + P  V+T + +   K  + G    Y +          +L+P   A 
Sbjct: 170 AANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIAN 229

Query: 220 AALYLGSDESKCVSGHNLVVDGGFAI 245
             + L  D++  ++G  + +     I
Sbjct: 230 GLITLIEDDA--LNGAIMKITTSKGI 253

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  208 bits (531), Expect = 3e-67
 Identities = 74/262 (28%), Positives = 114/262 (43%), Gaps = 33/262 (12%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M++RL+GK ALITG ARGIG   A  + + GA V IADI  +       +IG ++     
Sbjct: 2   MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAA----- 56

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              V  DVT++  I+ A+   V   G LDI+ NNA  + ++ P I++  +  +E++ +IN
Sbjct: 57  -YAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAA-LFDLAP-IVEITRESYEKLFAIN 113

Query: 126 LVGAFLG-----RNML-LG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           + G         R M+  G            G  G A    Y ++K  ++ L ++  ++L
Sbjct: 114 VAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDL 173

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAAEA 220
            +  I VN ++P  V          L            K  V            ED    
Sbjct: 174 IKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGM 233

Query: 221 ALYLGSDESKCVSGHNLVVDGG 242
           A++L S ES  +      VDGG
Sbjct: 234 AIFLASAESDYIVSQTYNVDGG 255

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  208 bits (533), Expect = 4e-67
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 51/284 (17%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-------------KDDLGESV 52
           M  +++GKVA ITG ARG G   A   ++ GA ++  D+              DDL E+V
Sbjct: 22  MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETV 81

Query: 53  --CKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNI 110
              + +G              DV     ++ AV+  VTQ G+LDI+  NA    E    +
Sbjct: 82  RQVEALGRR------IIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTR-L 134

Query: 111 LDNDQAEFERILSINLVGAFLG-----RNMLLG-----------VCGIIGGAATHAYTSS 154
              D   +  ++ +NL GA++       +++ G           + G+ G      Y +S
Sbjct: 135 NRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIAS 194

Query: 155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA-------------DDGLG 201
           KHGL GLM+  A+ELG   IRVN V P +V+TP+  +                       
Sbjct: 195 KHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVAS 254

Query: 202 GMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI 245
                L    +EP D + A L+L SD+++ ++G +L VDGG  +
Sbjct: 255 RQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL 298

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  205 bits (525), Expect = 1e-66
 Identities = 73/257 (28%), Positives = 124/257 (48%), Gaps = 34/257 (13%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL GKV ++T  A+GIG+  A  F++ GAKV+  DI +   + + K  G  +        
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQT-------- 54

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              DVTK+K I+   N       +LD++FN AG V      +LD ++ +++  +++N+  
Sbjct: 55  RVLDVTKKKQIDQFANE----VERLDVLFNVAGFV--HHGTVLDCEEKDWDFSMNLNVRS 108

Query: 129 AFLG-----RNMLLG----------VCGIIGGAATH-AYTSSKHGLLGLMKNTAVELGRF 172
            +L        ML            V   + G      Y+++K  ++GL K+ A +  + 
Sbjct: 109 MYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQ 168

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----EPEDAAEAALYLGSDE 228
           GIR NCV P  V TP  ++ ++   +        LK          E+ A   +YL SDE
Sbjct: 169 GIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDE 228

Query: 229 SKCVSGHNLVVDGGFAI 245
           S  V+G+ +++DGG+++
Sbjct: 229 SAYVTGNPVIIDGGWSL 245

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  207 bits (528), Expect = 2e-66
 Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 25/263 (9%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           R  GK  +ITG + GIG   A +F+K GA+V I    +D  E   + I  +   A   + 
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  DVT+    ++ +NT + ++GK+DI+ NNAG          D     +++   +N   
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142

Query: 129 AFL-------------GR--NMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
                           G   N+   V G    +    Y  +K  L    + TA++L + G
Sbjct: 143 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 202

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL--------EPEDAAEAALYLG 225
           +RVN VSP AV+T      + L +     +YS +             +PE+ A   ++L 
Sbjct: 203 VRVNSVSPGAVATGFMGA-MGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA 261

Query: 226 S-DESKCVSGHNLVVDGGFAIVN 247
             + S  + G ++V DGG  +V 
Sbjct: 262 DRNLSSYIIGQSIVADGGSTLVM 284

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  206 bits (526), Expect = 3e-66
 Identities = 75/266 (28%), Positives = 108/266 (40%), Gaps = 29/266 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           R   K  +ITG + GIG  TA LF++ GA V I     +  E   + I  S  S    + 
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG--TVDEVKPNILDNDQAEFERILSINL 126
           V  DVT E   +  +N+ + Q+GK+D++ NNAG    D       D     + + L +NL
Sbjct: 63  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122

Query: 127 VGAFL-------------GR--NMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
                             G   N+   V G         Y  +K  L    ++TA++L +
Sbjct: 123 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 182

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE---------PEDAAEAAL 222
           FGIRVN VSP  V T           D     + N   +  E         PE  A   L
Sbjct: 183 FGIRVNSVSPGMVETGFTNAM--GMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL 240

Query: 223 YLGSDE-SKCVSGHNLVVDGGFAIVN 247
           +L     S  + G ++V DGG ++V 
Sbjct: 241 FLADRNLSFYILGQSIVADGGTSLVM 266

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  205 bits (524), Expect = 3e-66
 Identities = 74/262 (28%), Positives = 116/262 (44%), Gaps = 23/262 (8%)

Query: 1   MHANLM--LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGS 58
           M +  +   + L+ KVAL+T    GIG   AR  ++ GA V+++  K +  +     +  
Sbjct: 1   MASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG 60

Query: 59  SSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEF 118
              S +G     C V K +D E  V  AV  +G +DI+ +NA         I+D  +  +
Sbjct: 61  EGLSVTG---TVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGN-IIDATEEVW 116

Query: 119 ERILSINLVGAFL-----GRNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMK 163
           ++IL +N+    L        M             V           Y  SK  LLGL K
Sbjct: 117 DKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTK 176

Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAAL 222
           N AVEL    IRVNC++P  + T  ++  L +       M  +L+   +  PED A    
Sbjct: 177 NLAVELAPRNIRVNCLAPGLIKTNFSQV-LWMDKARKEYMKESLRIRRLGNPEDCAGIVS 235

Query: 223 YLGSDESKCVSGHNLVVDGGFA 244
           +L S+++  ++G  +VV GG A
Sbjct: 236 FLCSEDASYITGETVVVGGGTA 257

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  204 bits (522), Expect = 4e-66
 Identities = 52/260 (20%), Positives = 97/260 (37%), Gaps = 27/260 (10%)

Query: 1   MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSS 60
           MH       L  ++ L+TG + GIG   A  ++++GA V++    ++    V   I   +
Sbjct: 1   MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET 60

Query: 61  SSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFER 120
                   +       ++ +         Y +LD + +NAG + +V P + + +   ++ 
Sbjct: 61  GRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP-MSEQNPQVWQD 119

Query: 121 ILSINLVGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNT 165
           ++ +N+   F+        +L              G  G A   AY +SK    G+M+  
Sbjct: 120 VMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVL 179

Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG 225
           A E  +  +RVNC++P    T +        D                P D     L+L 
Sbjct: 180 ADEYQQ-RLRVNCINPGGTRTAMRASAFPTEDPQKLK----------TPADIMPLYLWLM 228

Query: 226 SDESKCVSGHNLVVDGGFAI 245
            D+S+  +G       G   
Sbjct: 229 GDDSRRKTGMTFDAQPGRKP 248

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  200 bits (512), Expect = 4e-64
 Identities = 74/282 (26%), Positives = 114/282 (40%), Gaps = 57/282 (20%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-------------KDDLGESV 52
               L GKVA ITG ARG G   A   +  GA ++  D+              ++L  +V
Sbjct: 7   SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATV 66

Query: 53  --CKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPN 109
              +DIGS             DV   + +  A+   + + G+LDI+  NAG         
Sbjct: 67  KLVEDIGSR------IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGD- 119

Query: 110 ILDNDQAEFERILSINLVGAFLG-----RNMLLG-----------VCGIIGGAATH---- 149
                   +  ++ +NL G +         ++               G+ G  +      
Sbjct: 120 ------DGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSV 173

Query: 150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLK--------LADDGLG 201
            Y ++KHG++GLM+  A  L    IRVN + P  V TP+  +            A D  G
Sbjct: 174 GYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPG 233

Query: 202 GMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGF 243
            M + +   VL PED A A  +L SD+++ ++G  L VD GF
Sbjct: 234 AMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  198 bits (505), Expect = 2e-63
 Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 25/257 (9%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
              R + KV ++TG   GIG+  A   ++ GA V++ADI  +  E+V K I +   +A  
Sbjct: 3   GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAIS 62

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPN-ILDNDQAEFERILSI 124
              V  DV+  +  +   +  + ++G +D + NNA     +K + +L  D   +++ +S+
Sbjct: 63  ---VAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSV 119

Query: 125 NLVGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           NL GA        + M                 +       Y  +K G+ GL +  + EL
Sbjct: 120 NLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSN---YYGLAKVGINGLTQQLSREL 176

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDE 228
           G   IR+N ++P  + T   +       + +  +   L    +  P+D     L+L SDE
Sbjct: 177 GGRNIRINAIAPGPIDTEANRT--TTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDE 234

Query: 229 SKCVSGHNLVVDGGFAI 245
           +  ++G    VDGG  I
Sbjct: 235 ASWITGQIFNVDGGQII 251

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  198 bits (506), Expect = 2e-63
 Identities = 68/254 (26%), Positives = 115/254 (45%), Gaps = 22/254 (8%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL GK ALITG  +GIG   AR F+  GA+++++       ++  + +G      +    
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF--GTDVHT 74

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  D+ +          A   +G LD++ NNAG     +P ++D D   F+  +++NL  
Sbjct: 75  VAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGIS-HPQP-VVDTDPQLFDATIAVNLRA 132

Query: 129 AFL-----GRNMLLG-----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
             L     G+ M+                +      +AY +SK GL+   K  A ELG  
Sbjct: 133 PALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPH 192

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKC 231
           GIR N V P  V T + +      +     M + +  G    P + ++A ++L SD +  
Sbjct: 193 GIRANSVCPTVVLTEMGQRVWG-DEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASM 251

Query: 232 VSGHNLVVDGGFAI 245
           ++G ++ VDGG+ +
Sbjct: 252 INGVDIPVDGGYTM 265

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  197 bits (502), Expect = 8e-63
 Identities = 63/260 (24%), Positives = 100/260 (38%), Gaps = 36/260 (13%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
            ++  +GKVAL+TG A GIG          GA+V +AD       +              
Sbjct: 22  SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL------------ 69

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
             ++  D+ +    +          G+LDI+ NNAG V      I +   A++   L +N
Sbjct: 70  --HLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAG-VISRGR-ITETTDADWSLSLGVN 125

Query: 126 LVGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           +   F         M               G+  G     Y  +K  L  L +   ++  
Sbjct: 126 VEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHA 185

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAV-----LEPEDAAEAALYLG 225
             GIR+N V P  V+TP+ +              + L   V      EPED A+  L+L 
Sbjct: 186 PQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLA 245

Query: 226 SDESKCVSGHNLVVDGGFAI 245
           SD ++ + G  + V+GG A+
Sbjct: 246 SDAARYLCGSLVEVNGGKAV 265

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  196 bits (501), Expect = 1e-62
 Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 33/267 (12%)

Query: 1   MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSS 60
           M+   +  RL  +VA++TGGA+ IG       ++ GA+V+IAD+ + +     +D+    
Sbjct: 4   MYMEKL--RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG 61

Query: 61  SSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFER 120
              S    V  DVT  + ++NAV +   Q G++DI+   AG          D    ++ +
Sbjct: 62  HDVSS---VVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVK-AEDMTDGQWLK 117

Query: 121 ILSINLVGAFL-----GRNMLLG----------VCGIIG--GAATHAYTSSKHGLLGLMK 163
            + INL G F      GR ML            + G+I        AY +SK G+   ++
Sbjct: 118 QVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIR 177

Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-----EPEDAA 218
           + A E    GIR N V+P  + T L +  ++  +     +Y             +P++ A
Sbjct: 178 SLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPE-----LYDAWIAGTPMGRVGQPDEVA 232

Query: 219 EAALYLGSDESKCVSGHNLVVDGGFAI 245
               +L SD +  ++G  + VD GF +
Sbjct: 233 SVVQFLASDAASLMTGAIVNVDAGFTV 259

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  195 bits (499), Expect = 2e-62
 Identities = 78/259 (30%), Positives = 116/259 (44%), Gaps = 25/259 (9%)

Query: 1   MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSS 60
           M        L   VA++TG A GIG   A  F+K GA V++ D+K +  E+V   I  + 
Sbjct: 2   MSYESPFH-LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG 60

Query: 61  SSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFER 120
             A G   + C+VT E+  E  +  A+ Q+GK+ ++ NNAG      P   D   ++FE 
Sbjct: 61  GKAIG---LECNVTDEQHREAVIKAALDQFGKITVLVNNAGG---GGPKPFDMPMSDFEW 114

Query: 121 ILSINLVGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNT 165
              +NL   F        +M             + G        +Y SSK  +  L +N 
Sbjct: 115 AFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNI 174

Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYL 224
           A ++G  GIRVN ++P A+ T        L  +    M  +   G + E +D A AAL+L
Sbjct: 175 AFDVGPMGIRVNAIAPGAIKTDALATV--LTPEIERAMLKHTPLGRLGEAQDIANAALFL 232

Query: 225 GSDESKCVSGHNLVVDGGF 243
            S  +  +SG  L V GG 
Sbjct: 233 CSPAAAWISGQVLTVSGGG 251

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  195 bits (498), Expect = 2e-62
 Identities = 79/259 (30%), Positives = 124/259 (47%), Gaps = 26/259 (10%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSAS 64
           M + L+GKV +ITG + G+G+  A  F+   AKV++      D   SV ++I      A 
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILS 123
               V  DVT E D+ N V +A+ ++GKLD+M NNAG           +   +++ +++ 
Sbjct: 61  A---VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVS---SHEMSLSDWNKVID 114

Query: 124 INLVGAFLG-----RNML----LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
            NL GAFLG     +  +     G       V   I       Y +SK G+  + +  A+
Sbjct: 115 TNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLAL 174

Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGS 226
           E    GIRVN + P A++TP+  +      +    + S +  G + EPE+ A  A +L S
Sbjct: 175 EYAPKGIRVNNIGPGAINTPINAE-KFADPEQRADVESMIPMGYIGEPEEIAAVAAWLAS 233

Query: 227 DESKCVSGHNLVVDGGFAI 245
            E+  V+G  L  DGG  +
Sbjct: 234 SEASYVTGITLFADGGMTL 252

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  195 bits (498), Expect = 6e-62
 Identities = 66/284 (23%), Positives = 102/284 (35%), Gaps = 52/284 (18%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG--- 65
           R+Q KV L+TGGARG G   A   ++ GA +++ DI  D+ E+    + +S         
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDI-ETNEYPLATSRDLEEAGLE 65

Query: 66  -------CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEF 118
                        DV     +   +  AV ++GKLD++  NAG    + P         F
Sbjct: 66  VEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAG----ICPLGAHLPVQAF 121

Query: 119 ERILSINLVGAFLG-----RNMLLG--------VCGIIGGAATH-----------AYTSS 154
                ++ VG           +  G        V G+I  A               Y+ +
Sbjct: 122 ADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYA 181

Query: 155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFL------------KLADDGLGG 202
           K  +       A +L    IR N + P  V+T +                   AD  L  
Sbjct: 182 KQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAF 241

Query: 203 MYSN-LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI 245
                +    +E  D + A  +L SDES+ V+G    VD G  +
Sbjct: 242 PAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  192 bits (491), Expect = 2e-61
 Identities = 57/246 (23%), Positives = 94/246 (38%), Gaps = 29/246 (11%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L+G+V L+TG ARGIG   AR ++ HGA V++    +     V   I S+         
Sbjct: 11  LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIA 70

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           ++ +    +           ++G+LD + +NA  +    P +      +F +++ +N+  
Sbjct: 71  LNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTP-LEQLPDEDFMQVMHVNVNA 129

Query: 129 AFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL-GRF 172
            F+        +               G  G A   AY  SK    GLM+  A EL G  
Sbjct: 130 TFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVT 189

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLAD-DGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC 231
            +R N ++P A  T +        +                 PED     LYL   +S  
Sbjct: 190 AVRANSINPGATRTGMRAQAYPDENPLNNPA-----------PEDIMPVYLYLMGPDSTG 238

Query: 232 VSGHNL 237
           ++G  L
Sbjct: 239 INGQAL 244

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  192 bits (491), Expect = 5e-61
 Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 30/266 (11%)

Query: 3   ANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSS 61
            NL  + +  K A+ITG   GIG   AR  +K GA +++      D   +V  ++   SS
Sbjct: 16  ENLYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS 75

Query: 62  SASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERI 121
                 +   D+TK  +I + +     ++G  DI+ NNAG V  V+  I D    +++RI
Sbjct: 76  GT--VLHHPADMTKPSEIADMMAMVADRFGGADILVNNAG-VQFVEK-IEDFPVEQWDRI 131

Query: 122 LSINLVGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTA 166
           +++NL  +F         M               G++      AY ++KHG++GL K  A
Sbjct: 132 IAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVA 191

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----------EPED 216
           +E+   G+ VN + P  V TPL +  +       G     +   V+            E 
Sbjct: 192 LEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQ 251

Query: 217 AAEAALYLGSDESKCVSGHNLVVDGG 242
            A  ALYL  D++  ++G ++ +DGG
Sbjct: 252 VASLALYLAGDDAAQITGTHVSMDGG 277

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  191 bits (489), Expect = 9e-61
 Identities = 62/271 (22%), Positives = 110/271 (40%), Gaps = 27/271 (9%)

Query: 1   MHANLMLR-RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSS 59
           M+ N   R  L+G  AL+TGG++GIG       +  GA+V      +   +   +     
Sbjct: 9   MNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK 68

Query: 60  SSSASGCSYVHCDVTKEKDIENAVNTAVTQY-GKLDIMFNNAGTVDEVKPNILDNDQAEF 118
             +  G     CD+    + +  + T    + GKL+I+ NNAG V   K    D  + ++
Sbjct: 69  GLNVEG---SVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVV-IHKE-AKDFTEKDY 123

Query: 119 ERILSINLVGAFL-----GRNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMK 163
             I+  N   A+         +             + G     +   Y++SK  +  + K
Sbjct: 124 NIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTK 183

Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK----GAVLEPEDAAE 219
           + A E  +  IRVN V+P  + TPL +  +K        + + +     G   +P++ + 
Sbjct: 184 SLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSA 243

Query: 220 AALYLGSDESKCVSGHNLVVDGGFAIVNAGF 250
              +L    +  ++G  +  DGGF   N GF
Sbjct: 244 LIAFLCFPAASYITGQIIWADGGF-TANGGF 273

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  190 bits (486), Expect = 2e-60
 Identities = 54/247 (21%), Positives = 96/247 (38%), Gaps = 28/247 (11%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           +   K+A++TG   G+G   A   +  G  V +A  + D  +    +IG           
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDD------ALC 78

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  DVT    +       V ++G++D++FNNAGT     P + D   A++++++  NL G
Sbjct: 79  VPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIP-MEDLTFAQWKQVVDTNLTG 137

Query: 129 AFLG-----RNMLLG------------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
            FL      R M               +        +  YT++KH + GL K+T+++   
Sbjct: 138 PFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRV 197

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD-ESK 230
             I    +      TP+A+            +       V++    A A +Y+ S     
Sbjct: 198 HDIACGQIDIGNADTPMAQKMKAGVPQADLSIKV---EPVMDVAHVASAVVYMASLPLDA 254

Query: 231 CVSGHNL 237
            V    +
Sbjct: 255 NVQFMTI 261

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  190 bits (484), Expect = 2e-60
 Identities = 62/258 (24%), Positives = 102/258 (39%), Gaps = 28/258 (10%)

Query: 5   LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSAS 64
           +++   QGK A++ GG  G+G  T R   + GA+VL+    +     + ++ G       
Sbjct: 1   MVMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG------P 54

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
               +  D+    +I      A    G +D++  NAG V E++P      +A ++R  ++
Sbjct: 55  RVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAG-VSELEP-FDQVSEASYDRQFAV 112

Query: 125 NLVGAFL------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           N  GAF             G  +    V    G      Y++SK  L+      A EL  
Sbjct: 113 NTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLP 172

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-----EPEDAAEAALYLGS 226
            GIRVN VSP  + TP       + +       +              ++ A A L+L  
Sbjct: 173 RGIRVNSVSPGFIDTPTKGV-AGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAF 231

Query: 227 DESKCVSGHNLVVDGGFA 244
           + +   +G  L VDGG  
Sbjct: 232 E-ATFTTGAKLAVDGGLG 248

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  188 bits (480), Expect = 2e-59
 Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 33/262 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L G+ A++TGG++GIG   AR   K GA V IAD+     ++V   + +   +      
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFA------ 62

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  DVTK   ++ A+  A+   G  D++  NAG V  ++P  +D    E++    +N  G
Sbjct: 63  VEVDVTKRASVDAAMQKAIDALGGFDLLCANAG-VSTMRP-AVDITDEEWDFNFDVNARG 120

Query: 129 AFLG-----RNML----LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            FL      R+ L     G       +   +G      Y++SK  + G  +  A E+   
Sbjct: 121 VFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPK 180

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAAEAALY 223
            IRVNCV P  V T + +  +    +  G     ++   +         EPED A+  ++
Sbjct: 181 NIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVF 240

Query: 224 LGSDESKCVSGHNLVVDGGFAI 245
           L SD ++ ++G  + V GG  +
Sbjct: 241 LASDAARFMTGQGINVTGGVRM 262

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  187 bits (478), Expect = 3e-59
 Identities = 65/261 (24%), Positives = 106/261 (40%), Gaps = 32/261 (12%)

Query: 6   MLRRLQGKVALITGGA-RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSAS 64
               L+GKV L+T  A  GIG  TAR     GA V+I+D  +         +        
Sbjct: 16  GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGR- 74

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILS 123
               V CDVT  + ++  +   V + G+LD++ NNAG         ++D    E++R+L+
Sbjct: 75  -VEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTP---VVDMTDEEWDRVLN 130

Query: 124 INLVGAFLG-----RNML--------------LGVCGIIGGAATHAYTSSKHGLLGLMKN 164
           + L           R                 LG       +    Y ++K G++ L + 
Sbjct: 131 VTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSH---YAAAKAGVMALTRC 187

Query: 165 TAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALY 223
           +A+E   FG+R+N VSP        +     + + L  + S+   G   EP + A    +
Sbjct: 188 SAIEAVEFGVRINAVSPSIARHKFLEKT--SSSELLDRLASDEAFGRAAEPWEVAATIAF 245

Query: 224 LGSDESKCVSGHNLVVDGGFA 244
           L SD S  ++G  + V    A
Sbjct: 246 LASDYSSYMTGEVVSVSSQRA 266

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  187 bits (478), Expect = 3e-59
 Identities = 47/267 (17%), Positives = 84/267 (31%), Gaps = 30/267 (11%)

Query: 5   LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSAS 64
           +    L   VA++TGG+ GIG  T  L  + GA V       +   +    +      A 
Sbjct: 1   MKPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGAR 60

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILS 123
                 CDV     +           G   I+ NNAG           +     +   L 
Sbjct: 61  -LFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVS---TFAETTDEAWSEELQ 116

Query: 124 INLVGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
           +               +             +          A ++++ G+  L+++ A E
Sbjct: 117 LKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFE 176

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----------EPEDAA 218
               G+RVN +    V +   +   +  ++                        +P +AA
Sbjct: 177 FAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAA 236

Query: 219 EAALYLGSDESKCVSGHNLVVDGGFAI 245
            A L+L S  S   +G ++ V GG + 
Sbjct: 237 RAILFLASPLSAYTTGSHIDVSGGLSR 263

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  187 bits (477), Expect = 7e-59
 Identities = 56/252 (22%), Positives = 102/252 (40%), Gaps = 24/252 (9%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
             +G++AL+TGG  G+G   A+  S  G  V+I   + D+ ++   +IG  + +      
Sbjct: 30  SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNI--VRA 87

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V CDV     +         ++ +LD++ NNAG+     P + +    ++  I++ NL G
Sbjct: 88  VVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVP-LEEVTFEQWNGIVAANLTG 146

Query: 129 AFLG-----RNMLLG------------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           AFL      R M               +        +  YT++KH + GL K+TA++   
Sbjct: 147 AFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRM 206

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD-ESK 230
             I    +     +T +     +++   L           +  E  AEA +Y+ S   S 
Sbjct: 207 HDIACGQIDIGNAATDMTA---RMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPLSA 263

Query: 231 CVSGHNLVVDGG 242
            V    ++    
Sbjct: 264 NVLTMTVMATRM 275

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  186 bits (474), Expect = 9e-59
 Identities = 75/256 (29%), Positives = 107/256 (41%), Gaps = 30/256 (11%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           KVAL+TG  +GIG+  A    K G  V IAD  D   ++V  +I  +   A     V  D
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVA---VKVD 59

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG 132
           V+    +  AV  A    G  D++ NNAG V    P I        +++ +IN+ G   G
Sbjct: 60  VSDRDQVFAAVEQARKTLGGFDVIVNNAG-VAPSTP-IESITPEIVDKVYNINVKGVIWG 117

Query: 133 -----RNML-LG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV 176
                      G            G +G      Y+SSK  + GL +  A +L   GI V
Sbjct: 118 IQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITV 177

Query: 177 NCVSPYAVSTP----LAKDFLKLADDGLGGMYSNLKGAVL-----EPEDAAEAALYLGSD 227
           N   P  V TP    + +   + A   LG   +     +      EPED A    YL S 
Sbjct: 178 NGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASP 237

Query: 228 ESKCVSGHNLVVDGGF 243
           +S  ++G +L++DGG 
Sbjct: 238 DSDYMTGQSLLIDGGM 253

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  186 bits (475), Expect = 1e-58
 Identities = 77/257 (29%), Positives = 113/257 (43%), Gaps = 34/257 (13%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG--C 66
            L GK ALITG + GIG+  A  +++ GA+V +A    D  + V  +I     +  G   
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEI-----AGVGGKA 83

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
             + CDVT+   +   ++    + G +DI   NAG V      +LD    EF+RI   N+
Sbjct: 84  LPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQA--MLDMPLEEFQRIQDTNV 141

Query: 127 VGAFL-----GRNML----LG-------VCGIIGGAATH--AYTSSKHGLLGLMKNTAVE 168
            G FL      R M+     G       + G I         Y +SK  ++ L K  AVE
Sbjct: 142 TGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVE 201

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGG--MYSNLKGAVLEPEDAAEAALYLGS 226
           L    IRVN VSP  + T L +              +     G +  PE+     LYL S
Sbjct: 202 LAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIPL-----GRMGRPEELTGLYLYLAS 256

Query: 227 DESKCVSGHNLVVDGGF 243
             S  ++G ++V+DGG+
Sbjct: 257 AASSYMTGSDIVIDGGY 273

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  185 bits (473), Expect = 1e-58
 Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 33/256 (12%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           ++ KV +ITGG+ G+G+  A  F+K GA+V+I     +  E    +I            V
Sbjct: 4   MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILT---V 60

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGT-----VDEVKPNILDNDQAEFERILSI 124
             DV    DI+  +     ++G++DI+ NNA        +++  N        +  +++I
Sbjct: 61  QMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVN-------GWNSVINI 113

Query: 125 NLVGAFL-----GRNML-----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
            L G F      G+  +           +       G       ++K G+L + K  AVE
Sbjct: 114 VLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVE 173

Query: 169 LG-RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGS 226
            G ++GIRVN ++P  +      D L ++++       ++  G +  PE+ A  A YL S
Sbjct: 174 WGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCS 233

Query: 227 DESKCVSGHNLVVDGG 242
           DE+  ++G  + +DGG
Sbjct: 234 DEAAYINGTCMTMDGG 249

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  185 bits (472), Expect = 2e-58
 Identities = 65/263 (24%), Positives = 101/263 (38%), Gaps = 29/263 (11%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L+G  AL+TGG+RGIG       +  GA V                  S          
Sbjct: 6   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEA--- 62

Query: 69  VHCDVTKEKDIENAVNTAVTQY-GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
             CD++   + +  +NT    + GKL+I+ NNAG V   K    D    ++  I+SIN  
Sbjct: 63  SVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV-IYKE-AKDYTVEDYSLIMSINFE 120

Query: 128 GAFL-----GRNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            A+         +             V G +       Y ++K  +  L +  A E  + 
Sbjct: 121 AAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKD 180

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-----GAVLEPEDAAEAALYLGSD 227
            IRVN V P  ++T L +    + D       + L        + EP++ A    +L   
Sbjct: 181 NIRVNGVGPGVIATSLVEMT--IQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFP 238

Query: 228 ESKCVSGHNLVVDGGFAIVNAGF 250
            +  V+G  + VDGG  + N GF
Sbjct: 239 AASYVTGQIIYVDGGL-MANCGF 260

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  184 bits (471), Expect = 2e-58
 Identities = 70/259 (27%), Positives = 110/259 (42%), Gaps = 30/259 (11%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M +RL+ K+A+ITGGA GIG   A  F+  GA + IAD+           I +       
Sbjct: 1   MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP--APEAEAAIRNLGRRVLT 58

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSI 124
              V CDV++  D+E      ++ +G+ DI+ NNAG           +    ++++   I
Sbjct: 59  ---VKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIP---FDELTFEQWKKTFEI 112

Query: 125 NLVGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           N+   FL        M                 +   A   Y S+K   +G  +  A +L
Sbjct: 113 NVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDL 172

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---EPEDAAEAALYLGS 226
           G+ GI VN ++P  V T   +     A   +  +  N+  A+     P D   AA +L S
Sbjct: 173 GKDGITVNAIAPSLVRTATTE---ASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLAS 229

Query: 227 DESKCVSGHNLVVDGGFAI 245
           D++  ++G  L VDGG   
Sbjct: 230 DDASFITGQTLAVDGGMVR 248

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  183 bits (468), Expect = 5e-58
 Identities = 66/255 (25%), Positives = 99/255 (38%), Gaps = 31/255 (12%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M   L G+  L+TG  +GIG  T +     GA+V+         +S+ ++         G
Sbjct: 1   MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-------G 53

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              V  D+   +  E A+       G +D++ NNA      +P  L+  +  F+R   +N
Sbjct: 54  IEPVCVDLGDWEATERALG----SVGPVDLLVNNAAVALL-QP-FLEVTKEAFDRSFEVN 107

Query: 126 LVGAFL-----GRNMLLG-----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           L           R ++              C          Y S+K  L  L K  A+EL
Sbjct: 108 LRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALEL 167

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDE 228
           G   IRVN V+P  V T + +            M + +  G   E E    A L+L SD 
Sbjct: 168 GPHKIRVNAVNPTVVMTSMGQATWS-DPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR 226

Query: 229 SKCVSGHNLVVDGGF 243
           S   +G  L V+GGF
Sbjct: 227 SGMTTGSTLPVEGGF 241

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  185 bits (473), Expect = 5e-58
 Identities = 58/275 (21%), Positives = 115/275 (41%), Gaps = 38/275 (13%)

Query: 6   MLR--RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSA 63
            L    LQG+VA++TGGA GIG+   +   + G+ V+IA  K +  +S   ++ ++    
Sbjct: 10  YLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPT 69

Query: 64  SG--CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGT-----VDEVKPNILDNDQA 116
                  + C++  E+++ N V + +  +GK++ + NN G       + +          
Sbjct: 70  KQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSK------- 122

Query: 117 EFERILSINLVGAFL-----GRNML---------LGVCGIIGGAATHAYTSSKHGLLGLM 162
            +  +L  NL G F        + +         + V    G        +++ G+  L 
Sbjct: 123 GWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLT 182

Query: 163 KNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-----EPEDA 217
           K+ A+E    GIR+NCV+P  + +  A +            +      +       PE+ 
Sbjct: 183 KSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQ---SFFEGSFQKIPAKRIGVPEEV 239

Query: 218 AEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSV 252
           +    +L S  +  ++G ++ VDGG ++    + V
Sbjct: 240 SSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEV 274

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  185 bits (472), Expect = 7e-58
 Identities = 69/271 (25%), Positives = 112/271 (41%), Gaps = 39/271 (14%)

Query: 6   MLRR--LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSA 63
           ML     QGKVA ITGG  G+G+    L S  GA+ +IA  K D+ ++  + I  SS + 
Sbjct: 18  MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQI--SSQTG 75

Query: 64  SGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGT-----VDEVKPNILDNDQAEF 118
           +    + CDV     ++N V+  +   G  +I+ NNA        + + PN        +
Sbjct: 76  NKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPN-------AW 128

Query: 119 ERILSINLVGAFL-----GRNMLLG-----------VCGIIGGAATHAYTSSKHGLLGLM 162
           + I  I L G        G+ ++             +    G        S+K G+  + 
Sbjct: 129 KTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMS 188

Query: 163 KNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSN--LK--GAVLEPEDAA 218
           K+ A E G++G+R N + P  + T  A   L         M         G     E+ A
Sbjct: 189 KSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLG---TVEELA 245

Query: 219 EAALYLGSDESKCVSGHNLVVDGGFAIVNAG 249
             A +L SD +  ++G  +  DGG  ++ +G
Sbjct: 246 NLAAFLCSDYASWINGAVIKFDGGEEVLISG 276

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  182 bits (465), Expect = 2e-57
 Identities = 67/252 (26%), Positives = 102/252 (40%), Gaps = 31/252 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
              G  AL+TG  +GIG  T +     GAKV+     +    S+ K+         G   
Sbjct: 4   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-------GIEP 56

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  D+      E A+       G +D++ NNA  V  ++P  L+  +  F+R  S+NL  
Sbjct: 57  VCVDLGDWDATEKALG----GIGPVDLLVNNAALV-IMQP-FLEVTKEAFDRSFSVNLRS 110

Query: 129 AFL-----GRNMLLG-----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            F       R+M+             +   +       Y+S+K  +  L K  A+ELG  
Sbjct: 111 VFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPH 170

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKC 231
            IRVN V+P  V T + K       +    +          E ED   + L+L SD S  
Sbjct: 171 KIRVNSVNPTVVLTDMGKKVSA-DPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSAS 229

Query: 232 VSGHNLVVDGGF 243
            SG  ++VD G+
Sbjct: 230 TSGGGILVDAGY 241

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  183 bits (468), Expect = 2e-57
 Identities = 60/255 (23%), Positives = 102/255 (40%), Gaps = 29/255 (11%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG--C 66
            L+GKVA +TG + GIG   A  +++ GA V I        E              G   
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQ-----KTYGVHS 85

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
               C+++  K +E  ++     +G +D+   NAG      P I  ++   + +I+S++L
Sbjct: 86  KAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDL 145

Query: 127 VGAFL-----GRNML---LG-------VCGIIGGAATH--AYTSSKHGLLGLMKNTAVEL 169
            G +      G+       G       + G I         Y ++K     L K+ A+E 
Sbjct: 146 NGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEW 205

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSDE 228
             F  RVN +SP  + T +       + D     +     G     ++     LYL S+ 
Sbjct: 206 APFA-RVNTISPGYIDTDITD---FASKDMKAKWWQLTPLGREGLTQELVGGYLYLASNA 261

Query: 229 SKCVSGHNLVVDGGF 243
           S   +G ++V+DGG+
Sbjct: 262 STFTTGSDVVIDGGY 276

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  181 bits (461), Expect = 7e-57
 Identities = 66/259 (25%), Positives = 106/259 (40%), Gaps = 31/259 (11%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+GK AL+TG   GIG   A++ ++ GA +++    D        +I      A    + 
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAV---HH 56

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             D++    IE     A  ++G +DI+ NNAG +  V P +       +++I+++NL   
Sbjct: 57  PADLSDVAQIEALFALAEREFGGVDILVNNAG-IQHVAP-VEQFPLESWDKIIALNLSAV 114

Query: 130 FLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F G       M             V G++G     AY ++KHG++GL K   +E     +
Sbjct: 115 FHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNV 174

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAAEAALYLG 225
             N + P  V TPL +  +       G         +           PE   E  L+L 
Sbjct: 175 TCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLC 234

Query: 226 SDESKCVSGHNLVVDGGFA 244
           S+    V G    VDGG+ 
Sbjct: 235 SEAGSQVRGAAWNVDGGWL 253

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  181 bits (462), Expect = 8e-57
 Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 28/255 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL GK  L+TG A GIG     LF++ GA ++  D ++ L       + +          
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE------AIA 56

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLV 127
           V  DV+  K +E     A+ ++G+L  + + AG     +     +     +E++L +NL 
Sbjct: 57  VVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSAL---SWNLPLEAWEKVLRVNLT 113

Query: 128 GAFLG-----RNMLLG--------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           G+FL        +  G        V G +G      Y + K G++GL +  A+EL R G+
Sbjct: 114 GSFLVARKAGEVLEEGGSLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKGV 172

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSDESKCVS 233
           RVN + P  + TP+      L              G    PE+ A+AAL+L S+ES  ++
Sbjct: 173 RVNVLLPGLIQTPMTA---GLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYIT 229

Query: 234 GHNLVVDGGFAIVNA 248
           G  L VDGG +IV  
Sbjct: 230 GQALYVDGGRSIVGP 244

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  180 bits (459), Expect = 2e-56
 Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 32/259 (12%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADI--KDDLGESVCKDIGSSSSSASGCSYV 69
            KVA++TGGA+GIG   +   +  G  + +AD+  +++      K I ++   A     V
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVF---V 58

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             DVT + + ++A++ A  + G  D++ NNAG + ++KP +L+  + + ++I S+N+   
Sbjct: 59  GLDVTDKANFDSAIDEAAEKLGGFDVLVNNAG-IAQIKP-LLEVTEEDLKQIYSVNVFSV 116

Query: 130 FLG-----RNML-LG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
           F G     R    LG          +  I G     AY+++K  + GL +  A EL   G
Sbjct: 117 FFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKG 176

Query: 174 IRVNCVSPYAVSTP----LAKDFLKLADDGLGGMYSNLKGAVL-----EPEDAAEAALYL 224
             VN  +P  V T     +  +  K+    +G  +     ++       PED A    +L
Sbjct: 177 HTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFL 236

Query: 225 GSDESKCVSGHNLVVDGGF 243
            S+ S  V+G  ++VDGG 
Sbjct: 237 ASENSNYVTGQVMLVDGGM 255

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  179 bits (457), Expect = 3e-56
 Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 30/259 (11%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSY 68
           L+GKVA++TG   GIG   A   +  GA +++    D    E V   + +         Y
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK--VLY 59

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              D++K + +   V+ AV Q G++DI+ NNAG +      I D    +++ IL++NL  
Sbjct: 60  DGADLSKGEAVRGLVDNAVRQMGRIDILVNNAG-IQHTAL-IEDFPTEKWDAILALNLSA 117

Query: 129 AFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F G      +M               G++  A   AY ++KHG++G  K TA+E    G
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQG 177

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----------EPEDAAEAALY 223
           I  N + P  V TPL +  +    +  G         +L           PE     A++
Sbjct: 178 ITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVF 237

Query: 224 LGSDESKCVSGHNLVVDGG 242
           L SD +  ++G  + VDGG
Sbjct: 238 LASDAAAQITGTTVSVDGG 256

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  180 bits (460), Expect = 6e-56
 Identities = 77/282 (27%), Positives = 122/282 (43%), Gaps = 54/282 (19%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-------------KDDLGESV--C 53
           RLQGKVA ITG ARG G   A   ++ GA ++  D+              ++L E+V   
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV 102

Query: 54  KDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILD 112
           ++ G              DV     ++  V+ A+ ++G +DI+ +N G +       ++ 
Sbjct: 103 EEQGRR------IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGE---VVS 153

Query: 113 NDQAEFERILSINLVGAFLG-----RNMLLG-----------VCGIIGGAATHAYTSSKH 156
               ++  IL  NL+GA+        +M+               G+ G      Y +SKH
Sbjct: 154 LTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKH 213

Query: 157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTP----------LAKDFLKLADDGLGGMYSN 206
           G+ GLM + A E+GR  IRVN V+P AV+T                     +    ++S 
Sbjct: 214 GVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQ 273

Query: 207 ---LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI 245
              L    +EPED + A  +L SDE++ + G  + VDGG   
Sbjct: 274 LTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA 315

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  177 bits (452), Expect = 2e-55
 Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 37/260 (14%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL G  A +TG   GIG    R F+  GA++++ D +    +   +++G     A+  + 
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG-----AAVAAR 62

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  DVT  + +  A          + I+ N+AG         L+ D A + +++++N+ G
Sbjct: 63  IVADVTDAEAMTAAAA-EAEAVAPVSILVNSAGIARLHD--ALETDDATWRQVMAVNVDG 119

Query: 129 AFL-----GRNML-------------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
            F      GR M+              G        A+ +Y +SK  +  L +  A E  
Sbjct: 120 MFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFAS-SYMASKGAVHQLTRALAAEWA 178

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-----EPEDAAEAALYLG 225
             G+RVN ++P  V+T +      + +     ++             EP + A AAL+L 
Sbjct: 179 GRGVRVNALAPGYVATEMTLK---MRER--PELFETWLDMTPMGRCGEPSEIAAAALFLA 233

Query: 226 SDESKCVSGHNLVVDGGFAI 245
           S  +  V+G  L VDGG+ +
Sbjct: 234 SPAASYVTGAILAVDGGYTV 253

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  175 bits (447), Expect = 1e-54
 Identities = 63/264 (23%), Positives = 108/264 (40%), Gaps = 31/264 (11%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSSSAS 64
           M   L+GK  LITG ++GIG  TARLF++ GAKV +   K     +     + +    A+
Sbjct: 1   MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAA 60

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
                  D+   +  +  V+  V ++G +D++ NNAG +   KP + + D   ++ ++  
Sbjct: 61  F---FAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKP-LPEIDDTFYDAVMDA 116

Query: 125 NLVGAFLG-----RNMLLG---------------VCGIIGGAATHA-YTSSKHGLLGLMK 163
           N+    +       ++                  + G  GG      Y ++K  L  + K
Sbjct: 117 NIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHK 176

Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAAL 222
           N      + G+R N VSP  V T           D    + + +  G     E+ A A L
Sbjct: 177 NWVDFHTKDGVRFNIVSPGTVDTAFHA---DKTQDVRDRISNGIPMGRFGTAEEMAPAFL 233

Query: 223 YLGSDE-SKCVSGHNLVVDGGFAI 245
           +  S   S  ++G  L ++GG   
Sbjct: 234 FFASHLASGYITGQVLDINGGQYK 257

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  176 bits (448), Expect = 1e-54
 Identities = 62/254 (24%), Positives = 99/254 (38%), Gaps = 30/254 (11%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+ KVA ITGG  GIG   A +F +HG   +IA        +  + +  ++     C  +
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRR--CLPL 82

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERILSI 124
             DV     +  AV+ A+ ++G++DI+ N A          +  N        F+ ++ I
Sbjct: 83  SMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFN-------AFKTVMDI 135

Query: 125 NLVGAFL-----GRNML----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           +  G F                         G  G A      S+K  +  + ++ AVE 
Sbjct: 136 DTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEW 195

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSDE 228
           G   IRVN ++P  +S       L      L    +      +    + A + LYL S  
Sbjct: 196 GPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPL 255

Query: 229 SKCVSGHNLVVDGG 242
           +  V+G  LV DGG
Sbjct: 256 ASYVTGAVLVADGG 269

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  174 bits (444), Expect = 4e-54
 Identities = 67/261 (25%), Positives = 106/261 (40%), Gaps = 28/261 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L+ K  L+TGG +GIG      F+  GA +      +                 +G   
Sbjct: 11  SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTG--- 67

Query: 69  VHCDVTKEKDIENAVNTAVTQYG-KLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINL 126
             CD +   + E  + T  + +G KLDI+ NN G      KP  LD    +F   +S NL
Sbjct: 68  SVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS--KP-TLDYTAEDFSFHISTNL 124

Query: 127 VGAFL-----GRNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
             A+         +             + G++  +    Y+++K  L  L +N A E   
Sbjct: 125 ESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWAS 184

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSDESK 230
            GIR N V+P  ++TPLA+      D+    + S    G   EPE+ +    +L    + 
Sbjct: 185 DGIRANAVAPAVIATPLAEAV--YDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAAS 242

Query: 231 CVSGHNLVVDGGFAIVNAGFS 251
            ++G  + VDGG  +   GFS
Sbjct: 243 YITGQTICVDGGLTV--NGFS 261

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  173 bits (442), Expect = 6e-54
 Identities = 69/260 (26%), Positives = 110/260 (42%), Gaps = 39/260 (15%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L GK AL+TG ARG+G   A   +  GA+V++ DI+  L       +      A G   
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHG--- 62

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  DVT E  IE A +    +   +DI+ NNAG     KP +++ +   +++++  NL  
Sbjct: 63  VAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYR-KP-MVELELENWQKVIDTNLTS 120

Query: 129 AFL-----GRNML----LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           AFL      + M+     G       +           YT++K G+  L  + A E  +F
Sbjct: 121 AFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQF 180

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAAEAALY 223
            I+ N + P  + T +      L +D            V           PE+    A++
Sbjct: 181 NIQTNAIGPGYILTDMNTA---LIED------KQFDSWVKSSTPSQRWGRPEELIGTAIF 231

Query: 224 LGSDESKCVSGHNLVVDGGF 243
           L S  S  ++G  + VDGG+
Sbjct: 232 LSSKASDYINGQIIYVDGGW 251

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  174 bits (444), Expect = 6e-54
 Identities = 70/276 (25%), Positives = 114/276 (41%), Gaps = 43/276 (15%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
             +GK ALITGGARG+G   A   ++ GA + I D  ++  + V   + ++   A   + 
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENS-DVVGYPLATADDLAETVAL 65

Query: 69  V----------HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAE 117
           V            DV     +E+ V  A    G +DI   NAG +   +   + + + A+
Sbjct: 66  VEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIAL---LPEVESAQ 122

Query: 118 FERILSINLVGAFL-----GRNMLLG----------VCGIIGGAATHAYTSSKHGLLGLM 162
           ++ ++  NL G F         M+            + G     A  +Y SSK G++GL 
Sbjct: 123 WDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLT 182

Query: 163 KNTAVELGRFGIRVNCVSPYAVSTPLAKDFLK------------LADDGLGGMYSN-LKG 209
           K  A +L  +GI VN V+P  + TP+  +               L D        +    
Sbjct: 183 KCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYA 242

Query: 210 AVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI 245
             L+PE+   A L+L  + S  ++G  L +D G   
Sbjct: 243 PFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA 278

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  173 bits (441), Expect = 7e-54
 Identities = 43/253 (16%), Positives = 77/253 (30%), Gaps = 34/253 (13%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L  K  +      GIG  T+R   K   K  +   + +   ++ +    + +     ++
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELK--AINPKVNITF 59

Query: 69  VHCDVT-KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
              DVT    + +  +     Q   +DI+ N AG +D+           + ER ++IN  
Sbjct: 60  HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDD----------HQIERTIAINFT 109

Query: 128 GAFLG-----RNML---LG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           G                 G          V G         Y++SK  ++    + A   
Sbjct: 110 GLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLA 169

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES 229
              G+    ++P    TPL   F    D         L       E   +  +       
Sbjct: 170 PITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANK 229

Query: 230 KCVSGHNLVVDGG 242
              +G    +D G
Sbjct: 230 ---NGAIWKLDLG 239

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  173 bits (441), Expect = 1e-53
 Identities = 60/263 (22%), Positives = 102/263 (38%), Gaps = 29/263 (11%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M   + GKVA+ITG + GIG   A  F+K GA +++   + D      + +         
Sbjct: 1   MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSL--KEKFGVR 58

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              V  DV   + ++  V +  + +G  DI+ NNAG     +  I++    +++    + 
Sbjct: 59  VLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAG-TGSNET-IMEAADEKWQFYWELL 116

Query: 126 LVGAFLG-----RNML----------LGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           ++ A          M             +C +        Y  +K  L+   K  A E+ 
Sbjct: 117 VMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVI 176

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----------EPEDAAEA 220
           +  IRVNC++P  + TP      K      GG +     +V            PE+ A  
Sbjct: 177 KDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANF 236

Query: 221 ALYLGSDESKCVSGHNLVVDGGF 243
            ++L S+ +    G    VDGG 
Sbjct: 237 FVFLCSERATYSVGSAYFVDGGM 259

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  171 bits (437), Expect = 2e-53
 Identities = 35/257 (13%), Positives = 74/257 (28%), Gaps = 42/257 (16%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSSSASGCSYVHC 71
            +AL+T      G       ++ G  V+  D    D  E    +  +             
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN----------PGT 51

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAF 130
               E+  E  V+  +     +D + +N        +  +    +A+  ++     +   
Sbjct: 52  IALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPI 111

Query: 131 LG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
           L        +               G    A    Y  ++   + L+++ A  L R GI 
Sbjct: 112 LLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGIL 171

Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAAEAALYLGS 226
           +  + P   + P         ++        L+  V           P++      +L S
Sbjct: 172 LYAIGPNFFNNPTYFPTSDWENN------PELRERVDRDVPLGRLGRPDEMGALITFLAS 225

Query: 227 DESKCVSGHNLVVDGGF 243
             +  + G      GG+
Sbjct: 226 RRAAPIVGQFFAFTGGY 242

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  171 bits (436), Expect = 6e-53
 Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 29/245 (11%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L G+VA++TG +RGIG   AR     GA+V++     +   +V ++I ++   A     
Sbjct: 26  SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAES--- 82

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
             CD++    I       +  +G+ D++ NNAG      P +     AE++ ++++NL  
Sbjct: 83  HACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGP-LHTMKPAEWDALIAVNLKA 141

Query: 129 AFLG-----RNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            +L        M+    G       + G    A   AYT+SK GL GLM + A EL +  
Sbjct: 142 PYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQ 201

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS 233
           +RV+ V+P +V T        L+               +EP+D A+    L +   +   
Sbjct: 202 VRVSLVAPGSVRTEFGV---GLSAK-------KSALGAIEPDDIADVVALLATQADQSFI 251

Query: 234 GHNLV 238
              LV
Sbjct: 252 SEVLV 256

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  171 bits (436), Expect = 8e-53
 Identities = 59/260 (22%), Positives = 108/260 (41%), Gaps = 37/260 (14%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           + +G  A+++GGA G+GE T R     G  V+IAD+  + G+++  ++G+         +
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNR------AEF 80

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN---DQAEFERILSIN 125
           V  +VT E  +  A+  A         +  + G     +    D    D   F + + + 
Sbjct: 81  VSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLY 140

Query: 126 LVGAFLG-----RNMLL---------GVC-------GIIGGAATHAYTSSKHGLLGLMKN 164
           L G +        ++           G         G  G     AY ++K G++GL   
Sbjct: 141 LNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIA 200

Query: 165 TAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--GAVLEPEDAAEAAL 222
            A +L   GIRVN ++P  + TP+ +   + A           K  G    P++ A+AA 
Sbjct: 201 AARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLG---TPDEFADAAA 257

Query: 223 YLGSDESKCVSGHNLVVDGG 242
           +L ++    ++G  + +DG 
Sbjct: 258 FLLTNG--YINGEVMRLDGA 275

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  170 bits (433), Expect = 1e-52
 Identities = 35/250 (14%), Positives = 79/250 (31%), Gaps = 42/250 (16%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
               K  L+ GG+  +G    + F       +  D +++                     
Sbjct: 19  SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHS--------------- 63

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
                + E++I++ +    ++  K+D     AG          D      + ++ +NL  
Sbjct: 64  FTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNA-SSDEFLKSVKGMIDMNLYS 122

Query: 129 AFLG-----RNMLLG--------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELG--RFG 173
           AF       + +  G           +   +   AY ++K     ++K+ A E G    G
Sbjct: 123 AFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAG 182

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL-YLGSDESKCV 232
                + P  + TP  + ++  A+                  + AE    +  + +S+  
Sbjct: 183 STSLGILPVTLDTPTNRKYMSDAN----------FDDWTPLSEVAEKLFEWSTNSDSRPT 232

Query: 233 SGHNLVVDGG 242
           +G  +  +  
Sbjct: 233 NGSLVKFETK 242

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  170 bits (432), Expect = 2e-52
 Identities = 55/259 (21%), Positives = 91/259 (35%), Gaps = 42/259 (16%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
              GK   +TG  +GIG  TA  F + GAKV   D              + +      + 
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQ-------------AFTQEQYPFAT 50

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLV 127
              DV     +       + +  +LD + N AG              + ++++  ++N+ 
Sbjct: 51  EVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGA---TDQLSKEDWQQTFAVNVG 107

Query: 128 GAFL-----GRNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           GAF                                  AY +SK  L  L  +  +EL   
Sbjct: 108 GAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGS 167

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAAEAALY 223
           G+R N VSP +  T + +  L ++DD                        P++ A   L+
Sbjct: 168 GVRCNVVSPGSTDTDMQRT-LWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILF 226

Query: 224 LGSDESKCVSGHNLVVDGG 242
           L SD +  ++  ++VVDGG
Sbjct: 227 LASDLASHITLQDIVVDGG 245

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  169 bits (431), Expect = 3e-52
 Identities = 57/256 (22%), Positives = 89/256 (34%), Gaps = 23/256 (8%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
            V  ITG A GIG     L ++ G  V+  D      E+     G   + A       C 
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRET-AVAAVLDRCG 60

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG 132
              +  +  A          L +  N  G    +        + +    + +  + A   
Sbjct: 61  GVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQP 120

Query: 133 -----RNMLLGVCGII---------GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNC 178
                  +   + G            G    AY  SK+ +  L +   V+    G+R+N 
Sbjct: 121 GAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNV 180

Query: 179 VSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----EPEDAAEAALYLGSDESKCVSG 234
           V+P AV TPL +       D   G  +    A L    EP + AEA  +L   ++  + G
Sbjct: 181 VAPGAVETPLLQA---SKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQASFIHG 237

Query: 235 HNLVVDGGF-AIVNAG 249
             L VDGG  A++ A 
Sbjct: 238 SVLFVDGGMDALMRAK 253

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  168 bits (428), Expect = 7e-52
 Identities = 54/258 (20%), Positives = 98/258 (37%), Gaps = 31/258 (12%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSY 68
            Q K AL+TG +RG+G+  A   +++G  ++I   +         ++I            
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLV--- 58

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLV 127
           V  +V +   I+         +G+LD+  NNA   V      +++ ++  ++  ++IN  
Sbjct: 59  VKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRP---VMELEETHWDWTMNINAK 115

Query: 128 GAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
                     + M             +  I           SK  L  L +  AVEL   
Sbjct: 116 ALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPK 175

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----EPEDAAEAALYLGSDE 228
            I VN VS  A+ T   K      +D L       +        E +D  +   +L S +
Sbjct: 176 QIIVNAVSGGAIDTDALKH-FPNREDLLEDA---RQNTPAGRMVEIKDMVDTVEFLVSSK 231

Query: 229 SKCVSGHNLVVDGGFAIV 246
           +  + G  ++VDGG +++
Sbjct: 232 ADMIRGQTIIVDGGRSLL 249

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  168 bits (427), Expect = 1e-51
 Identities = 40/258 (15%), Positives = 77/258 (29%), Gaps = 37/258 (14%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
             A++T      G  +A   S+ G  V   D      + +          A   +Y    
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL---------EAFAETYPQLK 52

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL- 131
              E++    +    + YG++D++ +N     E +P I      ++   +    +  F  
Sbjct: 53  PMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQP-IDKYAVEDYRGAVEALQIRPFAL 111

Query: 132 ----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVN 177
                  M     G                   YTS++ G   L    + ELG + I V 
Sbjct: 112 VNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVF 171

Query: 178 CVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAAEAALYLGSDE 228
            + P  + +  +                     V            ++  E   +L S  
Sbjct: 172 AIGPNYLHSEDSP---YFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGS 228

Query: 229 SKCVSGHNLVVDGGFAIV 246
              ++G    + GGF ++
Sbjct: 229 CDYLTGQVFWLAGGFPMI 246

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  168 bits (428), Expect = 2e-51
 Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 29/241 (12%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
            L    G+ A++TGGA GIG  TA  F++ GA+++++D+     E     +      A G
Sbjct: 25  FLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHG 84

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              V CDV    ++    + A    G +D++F+NAG +    P +   +  ++  ++ I+
Sbjct: 85  ---VVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAG-IVVAGP-LAQMNHDDWRWVIDID 139

Query: 126 LVGAFLG-----RNML----LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           L G+          +L     G         G++  A    Y  +K+G++GL +  A E+
Sbjct: 140 LWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREV 199

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYS--------NLKGAVLEPEDAAEAA 221
              GI V+ + P  V T L  +  ++     G   +          +   +  +D A   
Sbjct: 200 KPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLT 259

Query: 222 L 222
            
Sbjct: 260 A 260

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  167 bits (424), Expect = 3e-51
 Identities = 43/239 (17%), Positives = 78/239 (32%), Gaps = 25/239 (10%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M    +     + G    IG   A+ F+  G  V       +    +  +I ++      
Sbjct: 1   MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVA 60

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
                 D   E ++   +N A   +  L++   N G  +   P IL+     F ++  + 
Sbjct: 61  ---RSLDARNEDEVTAFLN-AADAHAPLEVTIFNVG-ANVNFP-ILETTDRVFRKVWEMA 114

Query: 126 LVGAFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
               F+      R ML               + GG+   A+ S+K GL  + ++ A EL 
Sbjct: 115 CWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELM 174

Query: 171 RFGIRV-NCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE 228
              I V + +    V T   ++     +   G         ++ P   A A   L    
Sbjct: 175 PKNIHVAHLIIDSGVDTAWVRE---RREQMFGKDALANPDLLMPPAAVAGAYWQLYQQP 230

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  167 bits (426), Expect = 3e-51
 Identities = 62/266 (23%), Positives = 103/266 (38%), Gaps = 27/266 (10%)

Query: 1   MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSS 59
           ++   M+ +    VA++TGG RGIG   AR  +  G  + I  I D +    V  ++   
Sbjct: 18  LYFQSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL 77

Query: 60  SSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFE 119
            +       +  D+      +  V+  V ++G++D + NNAG    V+ + LD     F+
Sbjct: 78  GARVIF---LRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFD 134

Query: 120 RILSINLVGAFL-----GRNMLLG-------------VCGIIGGAATHAYTSSKHGLLGL 161
            I+ +NL G         + ML               V  ++       Y  SK GL   
Sbjct: 135 TIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAF 194

Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDAAE 219
            +  A+ L   GI V  V P  + + +      ++    G + S L       EPED   
Sbjct: 195 SQGLALRLAETGIAVFEVRPGIIRSDMTA---AVSGKYDGLIESGLVPMRRWGEPEDIGN 251

Query: 220 AALYLGSDESKCVSGHNLVVDGGFAI 245
               L   +    +G  +  DGG +I
Sbjct: 252 IVAGLAGGQFGFATGSVIQADGGLSI 277

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  166 bits (424), Expect = 3e-51
 Identities = 61/255 (23%), Positives = 104/255 (40%), Gaps = 40/255 (15%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           R Q KV +ITG ++GIG    R +     +V+                    S+      
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVAT------------SRSIKPSADPDIHT 72

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLV 127
           V  D++K +  +  V   + ++G++D + NNAG  + +     ++  Q +++  L +N+ 
Sbjct: 73  VAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKP---FVEMTQEDYDHNLGVNVA 129

Query: 128 GAFL-----GRNMLLG----------VCGIIG--GAATHAYTSSKHGLLGLMKNTAVELG 170
           G F         ML                    G  +   + +K GL  + ++ A+E  
Sbjct: 130 GFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFS 189

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
           R G+RVN VSP  + TP+          GL  +     G + E  D  +A LYL  + + 
Sbjct: 190 RSGVRVNAVSPGVIKTPMHPAETHSTLAGLHPV-----GRMGEIRDVVDAVLYL--EHAG 242

Query: 231 CVSGHNLVVDGGFAI 245
            ++G  L VDGG   
Sbjct: 243 FITGEILHVDGGQNA 257

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  166 bits (423), Expect = 4e-51
 Identities = 55/238 (23%), Positives = 90/238 (37%), Gaps = 30/238 (12%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M    Q  +A+ITG ++GIG   A   +  G +V++        E V  +I  S+     
Sbjct: 1   MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQE 60

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSI 124
              +  D+T     +  +     +YG +DI+ N A   +D      L      F +I+ I
Sbjct: 61  PIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMD----GSLSEPVDNFRKIMEI 116

Query: 125 NLVGAFLG-----RNML---------LG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           N++  +         M          +       G A    Y S+K  LLGL ++   EL
Sbjct: 117 NVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYREL 176

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD 227
              GIRV  + P  V+T +AK   K                +++P+D       L + 
Sbjct: 177 APLGIRVTTLCPGWVNTDMAK---KAGTPFKDEE-------MIQPDDLLNTIRCLLNL 224

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  166 bits (424), Expect = 4e-51
 Identities = 59/267 (22%), Positives = 91/267 (34%), Gaps = 43/267 (16%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG--C 66
               K  ++TGG RGIG    R  +  GA V +          V + +        G   
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKV----GKEFGVKT 66

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSIN 125
               CDV+    +   +       G +  +  NAG +V +      +    +F  +  +N
Sbjct: 67  KAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKP---ATELTHEDFAFVYDVN 123

Query: 126 LVGAFL-----GRNML------------------LGVCGIIGGAATHAYTSSKHGLLGLM 162
           + G F       +  L                  +    + G      Y SSK     L+
Sbjct: 124 VFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLV 183

Query: 163 KNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSN--LK--GAVLEPEDAA 218
           K  A E    GIRVN +SP  V+T        +         SN  L       +PE+  
Sbjct: 184 KGLAAEWASAGIRVNALSPGYVNTDQTA---HMDKKIRDHQASNIPLNRFA---QPEEMT 237

Query: 219 EAALYLGSDESKCVSGHNLVVDGGFAI 245
             A+ L SD +  ++G    +DGG  I
Sbjct: 238 GQAILLLSDHATYMTGGEYFIDGGQLI 264

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  166 bits (422), Expect = 8e-51
 Identities = 61/272 (22%), Positives = 97/272 (35%), Gaps = 43/272 (15%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG-------ESVCKDIGSSSS 61
            L GK   ITG +RGIG   A   ++ GA V IA               S    + ++  
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 62  SASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERI 121
                  + CD+ +E  +  AV   V  +G +DI+ NNA  +       LD     F+ +
Sbjct: 63  QGLA---LKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLR--GTLDTPMKRFDLM 117

Query: 122 LSINLVGAFL-----GRNMLLGVCGII------------GGAATHAYTSSKHGLLGLMKN 164
             +N  G+F+       ++L      I               A   YT +K G+  +   
Sbjct: 118 QQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLG 177

Query: 165 TAVELGRFGIRVNCVSP-YAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
            A E G  G+ +N + P   ++T        +                  PE  A+AA  
Sbjct: 178 LAAEFGPQGVAINALWPRTVIATDAINMLPGVDAAACR-----------RPEIMADAAHA 226

Query: 224 LGSDESKCVSGHNLVVDGGFAIVNAGFSVFGK 255
           + + E+    G  L+ D   A   AG +    
Sbjct: 227 VLTREAAGFHGQFLIDDEVLA--QAGITDLSG 256

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  166 bits (422), Expect = 9e-51
 Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 34/258 (13%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG--C 66
            L+G+VAL+TGG+RG+G   A+  ++ G  V++A    +      + +    +   G   
Sbjct: 18  DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKL----TEKYGVET 73

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
               CDV+  ++++  +     ++GKLD + N AG      P   +    EF +++ +NL
Sbjct: 74  MAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGIN-RRHP-AEEFPLDEFRQVIEVNL 131

Query: 127 VGAFL-----GRNMLLG----------VCGIIGGAATH-AYTSSKHGLLGLMKNTAVELG 170
            G +         +             +           AY +SK G+  L K  A E G
Sbjct: 132 FGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWG 191

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-----EPEDAAEAALYLG 225
           R+GIRVN ++P    T + +    +  D        +   +       PED    A++L 
Sbjct: 192 RYGIRVNVIAPGWYRTKMTEA---VFSD--PEKLDYMLKRIPLGRTGVPEDLKGVAVFLA 246

Query: 226 SDESKCVSGHNLVVDGGF 243
           S+E+K V+G  + VDGG+
Sbjct: 247 SEEAKYVTGQIIFVDGGW 264

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  165 bits (421), Expect = 9e-51
 Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 31/258 (12%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGC 66
           +R   +  ++ G  R IG   A  F++ GA V++      +   +   +I     SA   
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALA- 62

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
             +  D+T   ++E A++ A  ++G++  + + AG +   K  I + D+A + ++L +NL
Sbjct: 63  --IKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKT-IAEMDEAFWHQVLDVNL 119

Query: 127 VGAFLG-----RNMLLG--------VCGIIGGAATHA-YTSSKHGLLGLMKNTAVELGRF 172
              FL        M  G          G  GG      Y +SK  ++   +  A E+G  
Sbjct: 120 TSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP- 178

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-----EPEDAAEAALYLGSD 227
            IRVN V P  +ST                +   + GA         ED A    +L SD
Sbjct: 179 KIRVNAVCPGMISTTF------HDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASD 232

Query: 228 ESKCVSGHNLVVDGGFAI 245
           ++  V+G    ++GG   
Sbjct: 233 DAAYVTGACYDINGGVLF 250

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  165 bits (419), Expect = 1e-50
 Identities = 44/249 (17%), Positives = 86/249 (34%), Gaps = 34/249 (13%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           +     ++TG   G+G        + G +V +   +    +     +G++         +
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNA------VIGI 54

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             D+   +D++ A   AV   G  +++ + AG   E  P +      +  R++  NLV  
Sbjct: 55  VADLAHHEDVDVAFAAAVEWGGLPELVLHCAG-TGEFGP-VGVYTAEQIRRVMESNLVST 112

Query: 130 FLGRNMLL-------G-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
            L     +       G           +G A    Y +SK G+ G +++   EL    +R
Sbjct: 113 ILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLR 172

Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY-LGSDESKCVSG 234
           +  + P  + +                         + PEDAA   L  L +  S  V+ 
Sbjct: 173 LVNLYPSGIRSEFW-----------DNTDHVDPSGFMTPEDAAAYMLDALEARSSCHVTD 221

Query: 235 HNLVVDGGF 243
             +  + G 
Sbjct: 222 LFIGRNEGH 230

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  165 bits (420), Expect = 2e-50
 Identities = 57/271 (21%), Positives = 99/271 (36%), Gaps = 41/271 (15%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG-------ESVCKDIGSSSS 61
            L+GK   I+GG+RGIG   A+  +  GA V +     +          +  K+I  +  
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65

Query: 62  SASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERI 121
            A     +  D+     +  AV   V Q+G +DI  NNA  ++    +I +     F+ +
Sbjct: 66  QALP---IVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLG--SIEEVPLKRFDLM 120

Query: 122 LSINLVGAFLG-----RNMLLGVCGII-----------GGAATHAYTSSKHGLLGLMKNT 165
             I + G +        +M       I                  Y  +K+G+       
Sbjct: 121 NGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGI 180

Query: 166 AVELGRFGIRVNCVSP-YAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL 224
           A EL   GI  N + P   V+T   ++ L   D+ +            +PE  A+AA  +
Sbjct: 181 AEELRDAGIASNTLWPRTTVATAAVQNLL-GGDEAMARSR--------KPEVYADAAYVV 231

Query: 225 GSDESKCVSGHNLVVDGGFAIVNAGFSVFGK 255
            +  S    G+ L+ +       +G +    
Sbjct: 232 LNKPSSYT-GNTLLCEDVLL--ESGVTDLSV 259

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  161 bits (411), Expect = 4e-49
 Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 33/258 (12%)

Query: 9   RLQGKVALITG--GARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASG 65
            L+GKV ++TG  G +G+G   AR  ++ GA V I    +    E   K++        G
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKEL----EKTYG 72

Query: 66  --CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILS 123
                  C V   +  E  V   V  +G++D    NAG   +    ILD     +  ++ 
Sbjct: 73  IKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSG--ILDGSVEAWNHVVQ 130

Query: 124 INLVGAFL-----GRNMLLG----------VCGIIG--GAATHAYTSSKHGLLGLMKNTA 166
           ++L G F      G +              + G I        +Y  +K G + + ++ A
Sbjct: 131 VDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLA 190

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLG 225
            E   F  RVN +SP  + T L+     +  +     +S +  G     ++   A +Y  
Sbjct: 191 NEWRDF-ARVNSISPGYIDTGLSD---FVPKETQQLWHSMIPMGRDGLAKELKGAYVYFA 246

Query: 226 SDESKCVSGHNLVVDGGF 243
           SD S   +G +L++DGG+
Sbjct: 247 SDASTYTTGADLLIDGGY 264

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  160 bits (408), Expect = 6e-49
 Identities = 64/256 (25%), Positives = 106/256 (41%), Gaps = 31/256 (12%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
            RL GK AL+TG A+GIG+  A   +  GA V+++DI  +  ++    IG          
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKK------AR 55

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINL 126
            +  D++    ++          G +DI+ NNA            D D   + +I+ +NL
Sbjct: 56  AIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVA---WDDVDLDHWRKIIDVNL 112

Query: 127 VGAFLG-----RNML----LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
            G F+        M      G            G     AY ++K G++G  +  A ELG
Sbjct: 113 TGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELG 172

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--GAVLEPEDAAEAALYLGSDE 228
           ++ I  N V+P  + +   K       +   G    L+      +PE  A+   +L SD+
Sbjct: 173 KYNITANAVTPGLIESDGVK---ASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDD 229

Query: 229 SKCVSGHNLVVDGGFA 244
           ++ ++G  L VD G  
Sbjct: 230 ARWITGQTLNVDAGMV 245

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  161 bits (409), Expect = 1e-48
 Identities = 69/265 (26%), Positives = 104/265 (39%), Gaps = 39/265 (14%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
              + + A +TG + GIG   AR  +  G  V           +    + ++     G  
Sbjct: 20  HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDG-- 77

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINL 126
              CDVT   ++  AV  AV ++G + I+ N+AG           D D A +  +L  NL
Sbjct: 78  -SSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGE---TADLDDALWADVLDTNL 133

Query: 127 VGAFL----------------GR--NM--LLGVCGIIGGAATHAYTSSKHGLLGLMKNTA 166
            G F                 GR  N+    G  G++  A    YT+SKHG++G  K+  
Sbjct: 134 TGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAP---YTASKHGVVGFTKSVG 190

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDA 217
            EL + GI VN V P  V TP+A+   +      G     +               PE+ 
Sbjct: 191 FELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEV 250

Query: 218 AEAALYLGSDESKCVSGHNLVVDGG 242
           A    YL +D +  ++   L V GG
Sbjct: 251 AGLVGYLVTDAAASITAQALNVCGG 275

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  160 bits (408), Expect = 1e-48
 Identities = 67/259 (25%), Positives = 104/259 (40%), Gaps = 40/259 (15%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L G+ A++TG   GIG   A  +++ GA VL     D + E V  +I     SA     
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKE-VADEIADGGGSAEA--- 83

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  D+   +   N     +    ++D++ NNAG +   +    +     +  +L++NL  
Sbjct: 84  VVADLADLEGAANVAE-ELAATRRVDVLVNNAGII--ARAPAEEVSLGRWREVLTVNLDA 140

Query: 129 AFL-----GRNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
           A++     G  ML            +    GG    AY +SKH ++GL +  A E    G
Sbjct: 141 AWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRG 200

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAAEAALYL 224
           + VN ++P  V T        L  D            +           PED    A++L
Sbjct: 201 VGVNALAPGYVVTANTAA---LRADD------ERAAEITARIPAGRWATPEDMVGPAVFL 251

Query: 225 GSDESKCVSGHNLVVDGGF 243
            SD +  V G  L VDGG+
Sbjct: 252 ASDAASYVHGQVLAVDGGW 270

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  160 bits (406), Expect = 1e-48
 Identities = 50/255 (19%), Positives = 92/255 (36%), Gaps = 33/255 (12%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADI--KDDLGESVCKDIGSSSSSASGCSYV 69
           GKV L+TG +RGIG+    +        ++  +   +   + + +  G          YV
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDR------FFYV 55

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             D+T++  ++  VN AV  +GK+D +  NAG ++ V+  + + D   ++++  IN    
Sbjct: 56  VGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQN-VNEIDVNAWKKLYDINFFSI 114

Query: 130 FLG-----RNMLLG---------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
                     +                +  ++  AY SSK  L       A E     ++
Sbjct: 115 VSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANEE--RQVK 172

Query: 176 VNCVSPYAVSTPLAKDF-----LKLADDGLGGMYSNLK--GAVLEPEDAAEAALYL-GSD 227
              V+P  V T +  +                M+  LK    +L+    A     L    
Sbjct: 173 AIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHG 232

Query: 228 ESKCVSGHNLVVDGG 242
               V+G  L  +  
Sbjct: 233 IPDGVNGQYLSYNDP 247

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  159 bits (405), Expect = 3e-48
 Identities = 71/264 (26%), Positives = 105/264 (39%), Gaps = 39/264 (14%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
               +VAL+TG   GIG   AR   K G +V +    ++   +  K++  +   A G   
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADG--- 75

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLV 127
             CDV    +IE  V   V +YG +D++ NNAG           +     +  ++  NL 
Sbjct: 76  RTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA---TAELADELWLDVVETNLT 132

Query: 128 GAFL----------------GR--NM--LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
           G F                 GR  N+    G  G++  A    Y++SKHG++G  K   +
Sbjct: 133 GVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAA---PYSASKHGVVGFTKALGL 189

Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAA 218
           EL R GI VN V P  V TP+A    +   D            +          +P + A
Sbjct: 190 ELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVA 249

Query: 219 EAALYLGSDESKCVSGHNLVVDGG 242
           E   YL    +  V+   L V GG
Sbjct: 250 EMVAYLIGPGAAAVTAQALNVCGG 273

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  158 bits (402), Expect = 8e-48
 Identities = 63/259 (24%), Positives = 103/259 (39%), Gaps = 30/259 (11%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG-CS 67
            L G++AL+TGG+RGIG+  A+   + GA+V I     +        +     SA G C 
Sbjct: 26  SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRL-----SAYGDCQ 80

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINL 126
            +  D++ E               +LDI+ NNAG +       +     + +E+++ +N+
Sbjct: 81  AIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGA---ALESYPVSGWEKVMQLNV 137

Query: 127 VGAF---------LGRNMLLG----------VCGIIG-GAATHAYTSSKHGLLGLMKNTA 166
              F         L R+              V GI   G   +AY  SK  L  L +  A
Sbjct: 138 TSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLA 197

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS 226
            EL    I VN ++P    + + +              S   G    PE+ A  A+ L  
Sbjct: 198 KELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAG 257

Query: 227 DESKCVSGHNLVVDGGFAI 245
                ++G+ + +DGGF +
Sbjct: 258 TAGAYMTGNVIPIDGGFHL 276

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  158 bits (401), Expect = 1e-47
 Identities = 62/252 (24%), Positives = 109/252 (43%), Gaps = 26/252 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            LQG+  ++TGG +GIG   A +F++ GA V +A       ++   D+      +     
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLD--QLGSGKVIG 64

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLV 127
           V  DV+     +     AV ++G +D++  NAG   D     +      +   I ++N+ 
Sbjct: 65  VQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAP---LATMTPEQLNGIFAVNVN 121

Query: 128 GAFLG-----RNML---LG-------VCGIIGGAATHA-YTSSKHGLLGLMKNTAVELGR 171
           G F         ++    G       + G I G    + Y ++K   LG M+  A+EL  
Sbjct: 122 GTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAP 181

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSDESK 230
             I VN + P  + T       +  ++ +  M  ++  GA+  PED    A +L + E+ 
Sbjct: 182 HKITVNAIMPGNIMTEGLL---ENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAG 238

Query: 231 CVSGHNLVVDGG 242
            ++G  + VDGG
Sbjct: 239 YITGQAIAVDGG 250

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  158 bits (401), Expect = 2e-47
 Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 26/255 (10%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           ++  L  +  L+TGG +GIG   A +F++ GA V +A        SV  ++G     A  
Sbjct: 35  VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELG--ELGAGN 92

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSI 124
              V  DV+      +A  T V  +G LD++  NAG   +     +      +   +L +
Sbjct: 93  VIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEAR---LDTMTPEQLSEVLDV 149

Query: 125 NLVGAFL-----GRNML---LG-------VCGIIGGAATHA-YTSSKHGLLGLMKNTAVE 168
           N+ G           +     G       + G + G    + Y +SK   LG M+  A+E
Sbjct: 150 NVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIE 209

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSD 227
           L   G+ VN + P  + T        + ++ + GM  ++  G +  P D    A +L +D
Sbjct: 210 LAPRGVTVNAILPGNILTEGLV---DMGEEYISGMARSIPMGMLGSPVDIGHLAAFLATD 266

Query: 228 ESKCVSGHNLVVDGG 242
           E+  ++G  +VVDGG
Sbjct: 267 EAGYITGQAIVVDGG 281

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  156 bits (397), Expect = 4e-47
 Identities = 74/274 (27%), Positives = 120/274 (43%), Gaps = 50/274 (18%)

Query: 1   MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSS 60
           M A      ++G VA+ITGGA G+G  TA      GA  ++ D+ +  GE+  K +G++ 
Sbjct: 3   MAAACR--SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN- 59

Query: 61  SSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG------TVDEVKPNILDND 114
                C +   DVT EKD++ A+  A  ++G++D+  N AG      T +  K      +
Sbjct: 60  -----CVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLE 114

Query: 115 QAEFERILSINLVGAFLG-----RNMLL---------GVC----------GIIGGAATHA 150
              F+R+L +NL+G F         M           GV           G +G A   A
Sbjct: 115 D--FQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA---A 169

Query: 151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-- 208
           Y++SK G++G+    A +L   GIRV  ++P    TPL     +   + L          
Sbjct: 170 YSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRL 229

Query: 209 GAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG 242
           G   +P + A     +   E+  ++G  + +DG 
Sbjct: 230 G---DPAEYAHLVQAI--IENPFLNGEVIRLDGA 258

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  156 bits (396), Expect = 1e-46
 Identities = 55/279 (19%), Positives = 106/279 (37%), Gaps = 49/279 (17%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCS 67
            ++   A++TG A+ IG   A    + G +V+I      +   S+  ++  +   ++   
Sbjct: 20  HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADEL--NKERSNTAV 77

Query: 68  YVHCDVTKEK----DIENAVNTAVTQYGKLDIMFNNAG--------TVDEVKPNILDNDQ 115
               D+T         E  +N+    +G+ D++ NNA           D    +     +
Sbjct: 78  VCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVE 137

Query: 116 AEFERILSINLVGAFL-----GRNMLLG----------------VCGIIGGAATHAYTSS 154
            +   ++  N +  FL      +                             A   Y   
Sbjct: 138 TQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMG 197

Query: 155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSN-----LKG 209
           KH L+GL ++ A+EL  +GIRVN V+P     P+A     + ++              + 
Sbjct: 198 KHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA-----MGEEEKDKWRRKVPLGRREA 252

Query: 210 AVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA 248
                E  A+A ++L S  ++ ++G  + VDGG ++V+A
Sbjct: 253 ---SAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVHA 288

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  155 bits (394), Expect = 1e-46
 Identities = 67/264 (25%), Positives = 105/264 (39%), Gaps = 30/264 (11%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSAS 64
           +  RL GKVAL+TG  RGIG   A    + GAKV++         E V  +I +  S A 
Sbjct: 12  IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAI 71

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
               +  D+ +  +I    + AV  +G LDI  +N+G V     ++ D  + EF+R+ S+
Sbjct: 72  A---IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVV--SFGHLKDVTEEEFDRVFSL 126

Query: 125 NLVGAFL------------GR--NMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           N  G F             GR                   Y+ SK  +   ++  + + G
Sbjct: 127 NTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCG 186

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----------EPEDAAEA 220
              I VN V+P    T +  +             +  +  +            P+D A  
Sbjct: 187 DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANV 246

Query: 221 ALYLGSDESKCVSGHNLVVDGGFA 244
             +L S E + V+G  L +DGG A
Sbjct: 247 VGFLVSKEGEWVNGKVLTLDGGAA 270

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  154 bits (392), Expect = 2e-46
 Identities = 71/269 (26%), Positives = 114/269 (42%), Gaps = 50/269 (18%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M+ +L+ +V ++TG + G+G    R+ ++ GA VL  D+K   GE    ++G++      
Sbjct: 1   MVMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAA------ 54

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG------TVDEVKPNILDNDQAEFE 119
             + + DVT E D   A+  A  ++G +  + N AG       +    P+ LD     F 
Sbjct: 55  VRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALD----SFA 110

Query: 120 RILSINLVGAFLG-----RNMLL---------GVC----------GIIGGAATHAYTSSK 155
           R +++NL+G F         M           GV           G IG A   AY +SK
Sbjct: 111 RTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQA---AYAASK 167

Query: 156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--GAVLE 213
            G+  L    A EL RFGIRV  ++P    TP+     +   D L          G    
Sbjct: 168 GGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLG---R 224

Query: 214 PEDAAEAALYLGSDESKCVSGHNLVVDGG 242
            E+ A    ++   E+  ++G  + +DG 
Sbjct: 225 AEEYAALVKHI--CENTMLNGEVIRLDGA 251

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  156 bits (395), Expect = 3e-46
 Identities = 51/247 (20%), Positives = 96/247 (38%), Gaps = 34/247 (13%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           +   G+ A +TGGA G+G    R     G KV IADI+ D  +     + +  S      
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPE-VM 62

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
            V  DV   +  + A +    ++G + I+ NNAG V+  +P I ++   +++ +L +NL 
Sbjct: 63  GVQLDVASREGFKMAADEVEARFGPVSILCNNAG-VNLFQP-IEESSYDDWDWLLGVNLH 120

Query: 128 GAFLG-----RNMLLG----------------VCGIIGGAATHAYTSSKHGLLGLMKNTA 166
           G   G       M+                  +   +   +   Y ++K  + GL ++  
Sbjct: 121 GVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLH 180

Query: 167 VELGRFGIRVNCVSPYAVSTPLA----------KDFLKLADDGLGGMYSNLKGAVLEPED 216
             L ++ I V+ + P  V + +           K  +K  D       + +    +EP+ 
Sbjct: 181 YSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDV 240

Query: 217 AAEAALY 223
                + 
Sbjct: 241 IGARVIE 247

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  154 bits (391), Expect = 4e-46
 Identities = 74/262 (28%), Positives = 109/262 (41%), Gaps = 35/262 (13%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSAS 64
                   V L+TGG+RGIG    RL ++ G +V +    + +  ++V   I  S   A 
Sbjct: 20  FQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAV 79

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
               +  DV    DI    +    Q+G+LD + NNAG VD  +  + +      ER+L +
Sbjct: 80  A---IPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQR-VDEMSVERIERMLRV 135

Query: 125 NLVGAFLG-----RNMLLG-------------VCGIIGGAATHA-YTSSKHGLLGLMKNT 165
           N+ G+ L      R M                +  I+G A  +  Y +SK  +       
Sbjct: 136 NVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGL 195

Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-----EPEDAAEA 220
           A E+   GIRVN V P  + T L       A  GL      +  +V       PE+ A+A
Sbjct: 196 AREVAAEGIRVNAVRPGIIETDL------HASGGLPDRAREMAPSVPMQRAGMPEEVADA 249

Query: 221 ALYLGSDESKCVSGHNLVVDGG 242
            LYL S  +  V+G  L V GG
Sbjct: 250 ILYLLSPSASYVTGSILNVSGG 271

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  154 bits (391), Expect = 8e-46
 Identities = 60/251 (23%), Positives = 97/251 (38%), Gaps = 23/251 (9%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIA--DIKDDLGESVCKDIGSSSSSASG- 65
           RL+ + AL+TGG  GIG   A  +++ GA V I     +++  + V   I        G 
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALI-----EECGR 100

Query: 66  -CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
               +  D++ E    + V+ A    G LDI+   AG      P I D    +F++  ++
Sbjct: 101 KAVLLPGDLSDESFARSLVHKAREALGGLDILALVAG-KQTAIPEIKDLTSEQFQQTFAV 159

Query: 125 NLVGAFLG-----RNMLLG--------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           N+   F         +  G        +           Y ++K  +L   +  A ++  
Sbjct: 160 NVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAE 219

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC 231
            GIRVN V+P  + T L     +  D               +P + A   +YL S ES  
Sbjct: 220 KGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSY 279

Query: 232 VSGHNLVVDGG 242
           V+     V GG
Sbjct: 280 VTAEVHGVCGG 290

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  152 bits (386), Expect = 9e-46
 Identities = 50/249 (20%), Positives = 93/249 (37%), Gaps = 40/249 (16%)

Query: 13  KVALITGGARGIGECTARLFSKHGAK-------VLIADIKDDLGESVCKDIGSSSSSASG 65
            + LITG  +GIG   A  F++           ++++       E +  +  +  +    
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTD- 61

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSI 124
              +  D++   D+       V +YG +D + NNAG         + D  + +F+  ++ 
Sbjct: 62  --TITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFG---ALSDLTEEDFDYTMNT 116

Query: 125 NLVGAFLG-----RNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           NL G F         M     G       V        +  Y  SK G  GL++   +  
Sbjct: 117 NLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYA 176

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES 229
            +  +R+  V P AV TP+     K+ D+        ++  ++ PED A   +      S
Sbjct: 177 RKCNVRITDVQPGAVYTPMWG---KVDDE--------MQALMMMPEDIAAPVVQAYLQPS 225

Query: 230 KCVSGHNLV 238
           + V    ++
Sbjct: 226 RTVVEEIIL 234

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  152 bits (386), Expect = 2e-45
 Identities = 59/264 (22%), Positives = 100/264 (37%), Gaps = 31/264 (11%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSAS 64
           M      + ALIT G +G+G+         G  V +    D    E++ +          
Sbjct: 1   MSLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQ 60

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG---TVDEVKPNILDNDQAEFERI 121
               V  DVTK++D+   V  A++ +GK+D + NNAG      +    ++D ++ E+  +
Sbjct: 61  F---VQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKK---LVDYEEDEWNEM 114

Query: 122 LSINLVGAFL-----GRNML------------LGVCGIIGGAATHAYTSSKHGLLGLMKN 164
           +  NL   F         M              G     G     A+ ++K GL+ L K 
Sbjct: 115 IQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKT 174

Query: 165 TAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALY 223
            A E   +GI  N V P  +   + +       +       N   G     ED A    +
Sbjct: 175 VAYEEAEYGITANMVCPGDIIGEMKE---ATIQEARQLKEHNTPIGRSGTGEDIARTISF 231

Query: 224 LGSDESKCVSGHNLVVDGGFAIVN 247
           L  D+S  ++G  + V G   +++
Sbjct: 232 LCEDDSDMITGTIIEVTGAVDVIH 255

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  151 bits (385), Expect = 2e-45
 Identities = 48/254 (18%), Positives = 99/254 (38%), Gaps = 27/254 (10%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLI---ADIKDDLGESVCKDIGSSSSSAS 64
             L+ KV +I GG + +G  TA+ F+     +++        D    +  ++    +  +
Sbjct: 7   HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVA 66

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
                  D++ E+++    + A  ++GK+DI  N  G V   K  I++  +AEF+ + +I
Sbjct: 67  L---YQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVL--KKPIVETSEAEFDAMDTI 121

Query: 125 NLVGAFL-----GRNMLLG--------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           N   A+       ++M                       Y  +K  +    +  + EL +
Sbjct: 122 NNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMK 181

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--GAVLEPEDAAEAALYLGSDES 229
             I VN ++P  + T     F           + +      + + ED A    +L +D  
Sbjct: 182 QQISVNAIAPGPMDTSF---FYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD-G 237

Query: 230 KCVSGHNLVVDGGF 243
             ++G  +  +GG+
Sbjct: 238 WWINGQTIFANGGY 251

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  151 bits (384), Expect = 5e-45
 Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 23/251 (9%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCS 67
            L GK A +TGG+RGIG   A+  +  GA V +  +   +  ++V  +I  +   A    
Sbjct: 28  SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVA-- 85

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
            +  D    + IE A+   V   G LDI+ N+AG +    P + +   A+F+ ++++N  
Sbjct: 86  -IRADNRDAEAIEQAIRETVEALGGLDILVNSAG-IWHSAP-LEETTVADFDEVMAVNFR 142

Query: 128 GAFL------------GR--NMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
             F+            GR   +   +  ++       Y++SK  L GL K  A +LG  G
Sbjct: 143 APFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRG 202

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS 233
           I VN V P +  T +       A+     + +   G   EP+D A    +L   + K V+
Sbjct: 203 ITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSYG---EPQDIAGLVAWLAGPQGKFVT 259

Query: 234 GHNLVVDGGFA 244
           G +L +DGG  
Sbjct: 260 GASLTIDGGAN 270

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  150 bits (381), Expect = 6e-45
 Identities = 53/278 (19%), Positives = 88/278 (31%), Gaps = 78/278 (28%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
            + +I+G A GIG  T ++    G +++  DI+D                      V  D
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA--------------------EVIAD 41

Query: 73  VTKEKDIENAVNTAVTQ-YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           ++  +  + A+   + +    +D +   AG         L         ++S+N  GA  
Sbjct: 42  LSTAEGRKQAIADVLAKCSKGMDGLVLCAG---------LGPQTKVLGNVVSVNYFGATE 92

Query: 132 G-------------------------------------------RNMLLGVCGIIGGAAT 148
                                                             V         
Sbjct: 93  LMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN 152

Query: 149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK 208
            AY  SK+ L   ++  A   G  G+R+N ++P A  TPL +    L D   G   +   
Sbjct: 153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG--LQDPRYGESIAKFV 210

Query: 209 ---GAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGF 243
              G   EP + A    +L S  +  V G  +V+DGG 
Sbjct: 211 PPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  150 bits (380), Expect = 7e-45
 Identities = 34/252 (13%), Positives = 73/252 (28%), Gaps = 37/252 (14%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M    + +  L+ GG   +G    + F      V   D+ ++   S    +         
Sbjct: 1   MAASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK-------- 52

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              +    T++ D   A    +    K+D +   AG           +     + +   +
Sbjct: 53  ---MTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNA-KSKSLFKNCDLMWKQS 108

Query: 126 LVGAFLG-----RNMLLG--------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELG-- 170
           +  + +      +++  G           + G      Y  +K  +  L ++ A +    
Sbjct: 109 IWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGM 168

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
             G     V P  + TP+ +  +  AD            +    E   E      +   +
Sbjct: 169 PSGAAAIAVLPVTLDTPMNRKSMPEAD----------FSSWTPLEFLVETFHDWITGNKR 218

Query: 231 CVSGHNLVVDGG 242
             SG  + V   
Sbjct: 219 PNSGSLIQVVTT 230

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  150 bits (381), Expect = 1e-44
 Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 29/263 (11%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M  RL+  +AL+TG   GIG   +   +  GA V   D+     +   + +G   S    
Sbjct: 1   MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGP 60

Query: 66  CSYVH----CDVTKEKDIENAVNTAVTQYGK-LDIMFNNAG-TVDEVKPNILDNDQAEFE 119
               H     DV++ +     +      + +   ++ + AG T DE    +L   + +++
Sbjct: 61  PRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEF---LLHMSEDDWD 117

Query: 120 RILSINLVGAFL-----GRNML----LG-------VCGIIGGAATHAYTSSKHGLLGLMK 163
           +++++NL G FL      + ++     G       + G +G      Y +SK G++GL +
Sbjct: 118 KVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQ 177

Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAAL 222
             A ELGR GIR N V P  ++TP+ +   K+    +  +   +  G + +PED A+   
Sbjct: 178 TAARELGRHGIRCNSVLPGFIATPMTQ---KVPQKVVDKITEMIPMGHLGDPEDVADVVA 234

Query: 223 YLGSDESKCVSGHNLVVDGGFAI 245
           +L S++S  ++G ++ V GG  +
Sbjct: 235 FLASEDSGYITGTSVEVTGGLFM 257

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  150 bits (382), Expect = 1e-44
 Identities = 66/263 (25%), Positives = 102/263 (38%), Gaps = 31/263 (11%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGC 66
             L+GKVAL+TG  RGIG   A    + G KV++      +  E V   I  + S A+  
Sbjct: 25  ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAAC- 83

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
             V  +V   +DI      AV  +GKLDI+ +N+G V      + D    EF+R+ +IN 
Sbjct: 84  --VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSG-VVSFGH-VKDVTPEEFDRVFTINT 139

Query: 127 VGAFL------------GR--NMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            G F             GR   M               Y+ SK  +    +  A+++   
Sbjct: 140 RGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADK 199

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-----------EPEDAAEAA 221
            I VN V+P  + T +     +        + +                   P D A   
Sbjct: 200 KITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVV 259

Query: 222 LYLGSDESKCVSGHNLVVDGGFA 244
            +L S++   V+G  + +DGG  
Sbjct: 260 CFLASNDGGWVTGKVIGIDGGAC 282

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  150 bits (381), Expect = 2e-44
 Identities = 57/278 (20%), Positives = 98/278 (35%), Gaps = 47/278 (16%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG-ESVCKDIGSSSSSASGCS 67
             +   A+ITGGAR IG   A    + G +V++     +   + +  ++    ++A   S
Sbjct: 8   ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAEL----NAARAGS 63

Query: 68  --YVHCDVTKEKDI----ENAVNTAVTQYGKLDIMFNNAG---------TVDEVKPNILD 112
                 D++    +    E+ ++ +   +G+ D++ NNA            D        
Sbjct: 64  AVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAK 123

Query: 113 NDQAEFERILSINLVGAFLG-----RNMLLG---------------VCGIIGGAATHAYT 152
              A+   +   N V          R    G                   +       YT
Sbjct: 124 PIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYT 183

Query: 153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSN--LKGA 210
            +KH L GL +  A+EL    IRVN V+P     P A     +  +          L  +
Sbjct: 184 MAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPA-----MPQETQEEYRRKVPLGQS 238

Query: 211 VLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA 248
                  A+A  +L S ++  ++G  L VDGG  +  A
Sbjct: 239 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILARA 276

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  150 bits (380), Expect = 2e-44
 Identities = 62/266 (23%), Positives = 105/266 (39%), Gaps = 31/266 (11%)

Query: 3   ANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSS 61
            +   + L GKVAL TG  RGIG   A    + GA V++         E V  ++    +
Sbjct: 12  PSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA 71

Query: 62  SASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERI 121
                  +  D++K  ++    + AV+ +G LD + +N+G   EV  + L+  Q  F+++
Sbjct: 72  QGVA---IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGM--EVWCDELEVTQELFDKV 126

Query: 122 LSINLVGAFL------------GR--NMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
            ++N  G F             GR          + G      Y  SK  + G  +  AV
Sbjct: 127 FNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAV 186

Query: 168 ELGRFGIRVNCVSPYAVSTPL--AKDFLKLADDGLGGMYSNLKGAVL---------EPED 216
           + G  G+ VNC++P  V T +     +        G     +   +           P D
Sbjct: 187 DCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPAD 246

Query: 217 AAEAALYLGSDESKCVSGHNLVVDGG 242
              A   L  +ES+ ++G  + + GG
Sbjct: 247 IGRAVSALCQEESEWINGQVIKLTGG 272

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  149 bits (379), Expect = 2e-44
 Identities = 53/233 (22%), Positives = 85/233 (36%), Gaps = 35/233 (15%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           + + G++ LITG   GIG  TA  F+K  +K+++ DI     E          +      
Sbjct: 27  KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKV---H 83

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
               D +  +DI ++      + G + I+ NNAG V      +      + E+   +N++
Sbjct: 84  TFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVV-YTSD-LFATQDPQIEKTFEVNVL 141

Query: 128 G------AFLGRNMLLG---------VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL--- 169
                  AFL                  G +      AY SSK   +G  K    EL   
Sbjct: 142 AHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAAL 201

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL 222
              G++  C+ P  V+T   K+             S   G  LEPE+     +
Sbjct: 202 QITGVKTTCLCPNFVNTGFIKNP------------STSLGPTLEPEEVVNRLM 242

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  148 bits (377), Expect = 3e-44
 Identities = 47/253 (18%), Positives = 89/253 (35%), Gaps = 35/253 (13%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L     LITG ++ +G   A    +HG +V+I+   +    +   ++       +G   
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTEL-----RQAGAVA 75

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           ++ D + E  I   ++   TQ   L  + +NA             +   F R+ S++++ 
Sbjct: 76  LYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASE---WLAETPGEEADNFTRMFSVHMLA 132

Query: 129 AFLG-----RNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            +L        +                  G +   AY ++K GL  L  + A       
Sbjct: 133 PYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP-L 191

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKCV 232
           ++VN ++P  +      D             +    G     E   ++  YL    S  V
Sbjct: 192 VKVNGIAPALLMFQPKDD-----AAYRANALAKSALGIEPGAEVIYQSLRYLLD--STYV 244

Query: 233 SGHNLVVDGGFAI 245
           +G  L V+GG  +
Sbjct: 245 TGTTLTVNGGRHV 257

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  148 bits (375), Expect = 4e-44
 Identities = 70/257 (27%), Positives = 104/257 (40%), Gaps = 49/257 (19%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           + AL+TGG+RGIG   A      G +V IA    +            ++ + G   +  D
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE-----------EAAQSLGAVPLPTD 51

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL- 131
           + K+ D +  V  A+   G L ++ + A      KP  L+    E+ R+L ++L  AFL 
Sbjct: 52  LEKD-DPKGLVKRALEALGGLHVLVHAAAVN-VRKP-ALELSYEEWRRVLYLHLDVAFLL 108

Query: 132 ----GRNMLLG----------VCGIIGG--AATHAYTSSKHGLLGLMKNTAVELGRFGIR 175
                 +M             V     G      AYT++K  LLGL +  A E  R GIR
Sbjct: 109 AQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIR 168

Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAAEAALYLGS 226
           VN + P  V T        L  +        L   +           PE+ A  A  L  
Sbjct: 169 VNLLCPGYVETEFTL---PLRQN------PELYEPITARIPMGRWARPEEIARVAAVLCG 219

Query: 227 DESKCVSGHNLVVDGGF 243
           DE++ ++G  + VDGGF
Sbjct: 220 DEAEYLTGQAVAVDGGF 236

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  147 bits (374), Expect = 8e-44
 Identities = 82/257 (31%), Positives = 121/257 (47%), Gaps = 32/257 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL+ K  LITG A GIG  T  LF+K GA+++  DI++       + +G+          
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP-------- 53

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDN-DQAEFERILSINL 126
           V  DV     +E     A+   G+LD + + AG T D    N        ++E +L +NL
Sbjct: 54  VVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRD----NFHWKMPLEDWELVLRVNL 109

Query: 127 VGAFLG-----RNMLLGVCG-IIG-------GAATHA-YTSSKHGLLGLMKNTAVELGRF 172
            G+FL        M     G I+        G    A Y +S  G++GL +  A+ELGR+
Sbjct: 110 TGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRW 169

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSDESKC 231
           GIRVN ++P  + T +     K+ +       +    G   +P + A AAL+L SDES  
Sbjct: 170 GIRVNTLAPGFIETRMTA---KVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSF 226

Query: 232 VSGHNLVVDGGFAIVNA 248
           ++G  L VDGG  I  A
Sbjct: 227 ITGQVLFVDGGRTIGAA 243

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  146 bits (372), Expect = 2e-43
 Identities = 62/253 (24%), Positives = 101/253 (39%), Gaps = 30/253 (11%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSY 68
              KVA++TG +RGIG   A   +  G  V+I         E V   I ++   A     
Sbjct: 25  ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALT--- 81

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLV 127
              DV+    +     TA   +G +D++ NNAG         I +   A F+R++++NL 
Sbjct: 82  AQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPL---TTIAETGDAVFDRVIAVNLK 138

Query: 128 GAFL-----GRNMLLG--------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           G F       + + +G            +   +   Y ++K G+  +    + EL    I
Sbjct: 139 GTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDI 198

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----EPEDAAEAALYLGSDESK 230
            VN V+P   +T L  +    +D+         K A L     P+D A A  +L   +  
Sbjct: 199 TVNAVAPGPTATDLFLE--GKSDEVRDRF---AKLAPLERLGTPQDIAGAVAFLAGPDGA 253

Query: 231 CVSGHNLVVDGGF 243
            V+G  L  +GG 
Sbjct: 254 WVNGQVLRANGGI 266

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  146 bits (372), Expect = 4e-43
 Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 34/260 (13%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
                + KVAL+TG  RGIG   A++ +K  + V+         +SV  +I S    +SG
Sbjct: 38  YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSG 97

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNIL----DNDQAEFER 120
                 DV+K+++I   +N  +T++  +DI+ NNAG T D    N+     +++   +E 
Sbjct: 98  ---YAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRD----NLFLRMKNDE---WED 147

Query: 121 ILSINLVGAFL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNT 165
           +L  NL   F       + M+    G       + G+ G      Y+SSK G++G  K+ 
Sbjct: 148 VLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSL 207

Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYL 224
           A EL    I VN ++P  +S+ +     K+++     + SN+  G +  PE+ A  A +L
Sbjct: 208 AKELASRNITVNAIAPGFISSDMTD---KISEQIKKNIISNIPAGRMGTPEEVANLACFL 264

Query: 225 GSDESKCVSGHNLVVDGGFA 244
            SD+S  ++G   V+DGG +
Sbjct: 265 SSDKSGYINGRVFVIDGGLS 284

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  146 bits (371), Expect = 7e-43
 Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 32/260 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSSSASG-- 65
           +L+GK  LITGG  GIG   +  F+K GA + IA +  +       + +        G  
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYV-----EKEGVK 98

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
           C  +  D++ E+  ++ V   V Q G L+I+ NN       +  +      + E+   IN
Sbjct: 99  CVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVA-QQYPQQGLEYITAEQLEKTFRIN 157

Query: 126 LVGAFLG-----RNMLLG--------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           +   F        ++  G        +    G      Y+++K  ++   ++ +  L + 
Sbjct: 158 IFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQK 217

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSN--LK--GAVLEPEDAAEAALYLGSDE 228
           GIRVN V+P  + TPL        +  +    SN  ++  G   +P + A A +YL S +
Sbjct: 218 GIRVNGVAPGPIWTPLIPS--SFDEKKVSQFGSNVPMQRPG---QPYELAPAYVYLASSD 272

Query: 229 SKCVSGHNLVVDGGFAIVNA 248
           S  V+G  + V+GG  IVN 
Sbjct: 273 SSYVTGQMIHVNGG-VIVNG 291

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  145 bits (367), Expect = 1e-42
 Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 35/268 (13%)

Query: 3   ANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSS 62
           +N M  +L+GK AL+TG   GIG+  A      GA VLI   +++      K+I +    
Sbjct: 1   SNAMHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPD 60

Query: 63  ASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL 122
           A     V  D+  E+  ++ +     +Y K+DI+ NN G + E      D    ++ ++ 
Sbjct: 61  AI-LQPVVADLGTEQGCQDVIE----KYPKVDILINNLG-IFEPVE-YFDIPDEDWFKLF 113

Query: 123 SINLVGAFLG-----RNMLL----------GVCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
            +N++          + M+               I+       Y+++K   L L ++ A 
Sbjct: 114 EVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAE 173

Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-------------EP 214
                 + VN + P +  T   +  L              +   +              P
Sbjct: 174 LTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRP 233

Query: 215 EDAAEAALYLGSDESKCVSGHNLVVDGG 242
           E+ A    +L S  S  ++G  L +DGG
Sbjct: 234 EEIAHLVTFLSSPLSSAINGSALRIDGG 261

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  143 bits (363), Expect = 2e-42
 Identities = 67/231 (29%), Positives = 96/231 (41%), Gaps = 37/231 (16%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
                  LITG +RGIGE TARL    G +V +    +   +++  ++        G   
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-------GALP 54

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  DV +E D   AV      +G+L  + NNAG V  +KP + +    E+  +L  NL G
Sbjct: 55  LPGDVREEGDWARAVAAMEEAFGELSALVNNAG-VGVMKP-VHELTLEEWRLVLDTNLTG 112

Query: 129 AFLGRNMLL--------G-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
           AFLG    +        G       + G        AY +SK GLLGL     ++L    
Sbjct: 113 AFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREAN 172

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL 224
           +RV  V P +V T  A           G          L+PED A+A L+ 
Sbjct: 173 VRVVNVLPGSVDTGFA-----------GNTPGQAWK--LKPEDVAQAVLFA 210

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  143 bits (364), Expect = 4e-42
 Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 34/258 (13%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M + L  +VA++TG +RGIG   A   ++ GA V+     +   E +      +     G
Sbjct: 22  MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRG 81

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNIL----DNDQAEFER 120
                 +V     ++  V + + ++G L+++ NNAG T D     +     D++   ++ 
Sbjct: 82  ---AVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQD----QLAMRMKDDE---WDA 131

Query: 121 ILSINLVGAFL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNT 165
           ++  NL   F       R M+    G       V G  G      Y ++K G+ G+ +  
Sbjct: 132 VIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRAL 191

Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYL 224
           A E+G  GI VNCV+P  + T + K    L  +    + + +  G +  PED A A  +L
Sbjct: 192 AREIGSRGITVNCVAPGFIDTDMTK---GLPQEQQTALKTQIPLGRLGSPEDIAHAVAFL 248

Query: 225 GSDESKCVSGHNLVVDGG 242
            S ++  ++G  L V+GG
Sbjct: 249 ASPQAGYITGTTLHVNGG 266

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  142 bits (361), Expect = 6e-42
 Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 34/254 (13%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L  KVAL+TG +RGIG   A   +  GA V+         E     +      A G   +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARG---L 59

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNIL----DNDQAEFERILSI 124
             +++  + I+N       +   +DI+ NNAG T D    N++    +++   ++ +++ 
Sbjct: 60  VLNISDIESIQNFFAEIKAENLAIDILVNNAGITRD----NLMMRMSEDE---WQSVINT 112

Query: 125 NLVGAFL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           NL   F       R M+    G       V G  G      Y ++K G++G  K+ A E+
Sbjct: 113 NLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEV 172

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSDE 228
               I VN V+P  ++T +     KL D+    + + +  G + EP+D A A  +L S+E
Sbjct: 173 ASRNITVNVVAPGFIATDMTD---KLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEE 229

Query: 229 SKCVSGHNLVVDGG 242
           +K ++G  L V+GG
Sbjct: 230 AKYITGQTLHVNGG 243

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  141 bits (359), Expect = 1e-41
 Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 35/256 (13%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSSSASGCS 67
           +L+GK A++TG +RG+G+  A      GA +++         ++  ++  ++  +     
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVV-- 59

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNIL----DNDQAEFERIL 122
               DV   +D+EN V TA+  +G++DI+ NNAG T D     ++    + D   ++ +L
Sbjct: 60  -AKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRD----TLMLKMSEKD---WDDVL 111

Query: 123 SINLVGAFL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
           + NL  A+L      + ML    G       + GIIG A    Y +SK GL+G  K+ A 
Sbjct: 112 NTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAK 171

Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGS 226
           E    GI  N V+P  + T +      L D       +N+       PE+ A    +L S
Sbjct: 172 EFAAKGIYCNAVAPGIIKTDMTD---VLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLAS 228

Query: 227 DESKCVSGHNLVVDGG 242
           D+S  ++G  + +DGG
Sbjct: 229 DDSNYITGQVINIDGG 244

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  141 bits (359), Expect = 2e-41
 Identities = 51/259 (19%), Positives = 102/259 (39%), Gaps = 32/259 (12%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           +QGK+A++T G+ G+G  +A   +++GA++L+     +  E+    I S  S A     V
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQ-VDIV 63

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPN-ILDNDQAEFERILSINLVG 128
             D+ +  DI+          G  DI+  + G     +P   ++    +++    +    
Sbjct: 64  AGDIREPGDIDRLFE-KARDLGGADILVYSTGG---PRPGRFMELGVEDWDESYRLLARS 119

Query: 129 AFL--------------GR--NMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           A                GR   +   V  +            +  ++G+++  A+EL   
Sbjct: 120 AVWVGRRAAEQMVEKGWGRMVYI-GSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPH 178

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAAEAALY 223
           G+ VN V P  + T   +   +      G        ++          +PE+ A    +
Sbjct: 179 GVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAF 238

Query: 224 LGSDESKCVSGHNLVVDGG 242
           L S+++  ++G  + VDGG
Sbjct: 239 LASEKASFITGAVIPVDGG 257

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  141 bits (357), Expect = 2e-41
 Identities = 73/254 (28%), Positives = 122/254 (48%), Gaps = 37/254 (14%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+GKVAL+TG +RGIG+  A L ++ GAKV+     +   +++   +G +         +
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDN------GKGM 60

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNIL----DNDQAEFERILSI 124
             +VT  + IE  +     ++G +DI+ NNAG T D    N+L    + +   +  I+  
Sbjct: 61  ALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRD----NLLMRMKEEE---WSDIMET 113

Query: 125 NLVGAFL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           NL   F       R M+    G       V G +G A    Y ++K G++G  K+ A E+
Sbjct: 114 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREV 173

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSDE 228
              G+ VN V+P  + T + K    L D+      + +  G + +P + A A  +L S E
Sbjct: 174 ASRGVTVNTVAPGFIETDMTK---ALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPE 230

Query: 229 SKCVSGHNLVVDGG 242
           +  ++G  L V+GG
Sbjct: 231 AAYITGETLHVNGG 244

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  142 bits (360), Expect = 3e-41
 Identities = 52/291 (17%), Positives = 91/291 (31%), Gaps = 56/291 (19%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLI-------------ADIKDDLGES---V 52
                VAL+TG A+ +G   A      G  V +             A +      S   V
Sbjct: 6   APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 65

Query: 53  CKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVD------- 104
             D+ + +++    +     VT        V    T +G+ D++ NNA            
Sbjct: 66  QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRND 125

Query: 105 ----EVKPNILDNDQAEFERILSINLVGAFL-----GRNMLLG----------------V 139
               E      +  +     +   N +  +         +                    
Sbjct: 126 EDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDA 185

Query: 140 CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG 199
                      YT +K  L GL ++ A+EL    IRVN V P             +    
Sbjct: 186 MTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD-----MPPAV 240

Query: 200 LGGMYSN--LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA 248
             G  S   L        + ++  ++L S ++K ++G  + VDGG+++  A
Sbjct: 241 WEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTRA 291

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  143 bits (362), Expect = 3e-41
 Identities = 52/291 (17%), Positives = 91/291 (31%), Gaps = 56/291 (19%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLI-------------ADIKDDLGES---V 52
                VAL+TG A+ +G   A      G  V +             A +      S   V
Sbjct: 43  APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 102

Query: 53  CKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVD------- 104
             D+ + +++    +     VT        V    T +G+ D++ NNA            
Sbjct: 103 QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRND 162

Query: 105 ----EVKPNILDNDQAEFERILSINLVGAFL-----GRNMLLG----------------V 139
               E      +  +     +   N +  +         +                    
Sbjct: 163 EDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDA 222

Query: 140 CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG 199
                      YT +K  L GL ++ A+EL    IRVN V P             +    
Sbjct: 223 MTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD-----MPPAV 277

Query: 200 LGGMYSN--LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA 248
             G  S   L        + ++  ++L S ++K ++G  + VDGG+++  A
Sbjct: 278 WEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTRA 328

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  143 bits (363), Expect = 3e-41
 Identities = 59/272 (21%), Positives = 100/272 (36%), Gaps = 44/272 (16%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG-------ESVCKDIGSSSS 61
           RL G    ITG +RGIG+  A   +K GA ++IA               +  ++I +   
Sbjct: 42  RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 101

Query: 62  SASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERI 121
            A        DV  E+ I  AV  A+ ++G +DI+ NNA  +     N LD      + +
Sbjct: 102 KALP---CIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLT--NTLDTPTKRLDLM 156

Query: 122 LSINLVGAFLG-----RNMLLGVCGII------------GGAATHAYTSSKHGLLGLMKN 164
           +++N  G +L        +       I                  AYT +K+G+   +  
Sbjct: 157 MNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLG 216

Query: 165 TAVELGRFGIRVNCVSP-YAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
            A E     I VN + P  A+ T        L   G       ++    + +  A+AA  
Sbjct: 217 MAEEFKG-EIAVNALWPKTAIHTAAMD---MLGGPG-------IESQCRKVDIIADAAYS 265

Query: 224 LGSDESKCVSGHNLVVDGGFAIVNAGFSVFGK 255
           +        +G+ ++ +    +   G   F  
Sbjct: 266 IFQKPKSF-TGNFVIDEN--ILKEEGIENFDV 294

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  141 bits (357), Expect = 3e-41
 Identities = 56/255 (21%), Positives = 97/255 (38%), Gaps = 27/255 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            + G+V ++TG +RGIG   A    K GA V I     D    V ++  S          
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVP--- 58

Query: 69  VHCDVTKEKDIENAVNTAVT-QYGKLDIMFNNAGTVDEVKPNILDN-----DQAEFERIL 122
           V CD ++E ++ +        Q G+LD++ NNA    +   N  +        + ++ I 
Sbjct: 59  VVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDIN 118

Query: 123 SINLVGAFL-----GRNMLLGVCGII---------GGAATHAYTSSKHGLLGLMKNTAVE 168
           ++ L G +       R M+    G+I                Y   K     L  + A E
Sbjct: 119 NVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVPYGVGKAACDKLAADCAHE 178

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFL---KLADDGLGGMYSNLKGAVLEPEDAAEAALYLG 225
           L R G+    + P  V T L K+ +   ++  D +   + +   +    E + +  + L 
Sbjct: 179 LRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALA 238

Query: 226 SDE-SKCVSGHNLVV 239
           +D     +SG  L  
Sbjct: 239 TDPNILSLSGKVLPS 253

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  140 bits (356), Expect = 6e-41
 Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 37/254 (14%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L G+ AL+TG   GIGE  AR F   GA V +   ++D  + +  D+G            
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKD------VFVF 78

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNIL----DNDQAEFERILSI 124
             +++  K I+     A  +   +DI+ NNAG T D     +     D D   ++ +L++
Sbjct: 79  SANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRD----GLFVRMQDQD---WDDVLAV 131

Query: 125 NLVGAFL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           NL  A         +M+    G       + G++G      Y ++K GL+G  K  A E+
Sbjct: 132 NLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEI 191

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDE 228
               I VNC++P  + + +     KL +     + + +    +   E+ A A +YL SDE
Sbjct: 192 ASRNITVNCIAPGFIKSAMTD---KLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDE 248

Query: 229 SKCVSGHNLVVDGG 242
           +  ++G  L ++GG
Sbjct: 249 AAYLTGQTLHINGG 262

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  140 bits (356), Expect = 7e-41
 Identities = 46/239 (19%), Positives = 80/239 (33%), Gaps = 30/239 (12%)

Query: 1   MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSS 60
           ++       LQGK  ++TG ++GIG   A   +K GA V++     +  + V        
Sbjct: 17  LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC--LE 74

Query: 61  SSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFER 120
             A+   Y+   +      E  V  A    G LD++  N  T      N+  +D     +
Sbjct: 75  LGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHIT--NTSLNLFHDDIHHVRK 132

Query: 121 ILSINLVGAFLGRNMLL-------G-------VCGIIGGAATHAYTSSKHGLLGLMKNTA 166
            + +N +   +     L       G       + G +      AY++SK  L G   +  
Sbjct: 133 SMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIR 192

Query: 167 VELG--RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
            E    R  + +       + T  A      A  G+  M           E+ A   + 
Sbjct: 193 KEYSVSRVNVSITLCVLGLIDTETAMK----AVSGIVHM------QAAPKEECALEIIK 241

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  140 bits (354), Expect = 8e-41
 Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 46/263 (17%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            ++  VA++TGGA G+G  T +     GA+V++ DI+   GE V  D+G          +
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLGDR------ARF 56

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQ----AEFERILSI 124
              DVT E  + +A++ A    G L I+ N AGT + ++  +L  D     A F +I+ I
Sbjct: 57  AAADVTDEAAVASALDLA-ETMGTLRIVVNCAGTGNAIR--VLSRDGVFSLAAFRKIVDI 113

Query: 125 NLVGAFL-------------GRNMLLGVCGII----------GGAATHAYTSSKHGLLGL 161
           NLVG+F                       G+I          G     AY++SK G++G+
Sbjct: 114 NLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGM 173

Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--GAVLEPEDAAE 219
               A +L    IRV  ++P    TPL     + A   LG    +    G    P++   
Sbjct: 174 TLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLG---NPDEYGA 230

Query: 220 AALYLGSDESKCVSGHNLVVDGG 242
            A+++   E+  ++G  + +DG 
Sbjct: 231 LAVHII--ENPMLNGEVIRLDGA 251

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  139 bits (353), Expect = 8e-41
 Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 29/252 (11%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSSSASGCSY 68
              K AL+TG +RGIG   A   ++ G  V +      +  E+V ++I +    +     
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFA--- 58

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDN-DQAEFERILSINL 126
           +  +V    +++  +   V+Q+G LD++ NNAG T D    N+L    + E++ ++  NL
Sbjct: 59  IQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRD----NLLMRMKEQEWDDVIDTNL 114

Query: 127 VGAFL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
            G F         ML    G       V G +G      Y ++K G++GL K+ A EL  
Sbjct: 115 KGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELAS 174

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSDESK 230
            GI VN V+P  + + +      L+D+    M + +      +  D A    +L SD++K
Sbjct: 175 RGITVNAVAPGFIVSDMTD---ALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK 231

Query: 231 CVSGHNLVVDGG 242
            ++G  + V+GG
Sbjct: 232 YITGQTIHVNGG 243

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  139 bits (353), Expect = 1e-40
 Identities = 80/255 (31%), Positives = 122/255 (47%), Gaps = 35/255 (13%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSSSASGCSY 68
           L+GKVAL+TG +RGIG   A   +K GA V++     +     V  +I    S A     
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIA--- 58

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNIL----DNDQAEFERILS 123
           V  DV   +D+ N V   V  +G++DI+ NNAG T D    N+L    + +   ++ +++
Sbjct: 59  VRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKD----NLLMRMKEEE---WDTVIN 111

Query: 124 INLVGAFL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
            NL G FL      R M+    G       V G+ G      Y ++K G++GL K +A E
Sbjct: 112 TNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKE 171

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSD 227
           L    I VN ++P  ++T +      L ++    M   +      E +D A A  +  SD
Sbjct: 172 LASRNITVNAIAPGFIATDMTD---VLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASD 228

Query: 228 ESKCVSGHNLVVDGG 242
           +SK ++G  L VDGG
Sbjct: 229 QSKYITGQTLNVDGG 243

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  139 bits (353), Expect = 1e-40
 Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 33/258 (12%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M  +LQGKV+L+TG  RGIG   A   +  G+ V+I     +  ++V ++I  ++     
Sbjct: 1   MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEI--ANKYGVK 58

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNIL----DNDQAEFER 120
              V  ++  E+ I  A          +DI+ NNAG T D     +       D   +E 
Sbjct: 59  AHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRD----KLFLRMSLLD---WEE 111

Query: 121 ILSINLVGAFL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNT 165
           +L +NL G FL      R M+    G       V G  G      Y+++K GL+G  K+ 
Sbjct: 112 VLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSL 171

Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYL 224
           A EL    + VN V+P  + T +      L+++        +  G    PE+ A   L+L
Sbjct: 172 AKELAPRNVLVNAVAPGFIETDMTA---VLSEEIKQKYKEQIPLGRFGSPEEVANVVLFL 228

Query: 225 GSDESKCVSGHNLVVDGG 242
            S+ +  ++G  + V+GG
Sbjct: 229 CSELASYITGEVIHVNGG 246

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  138 bits (350), Expect = 2e-40
 Identities = 35/251 (13%), Positives = 76/251 (30%), Gaps = 42/251 (16%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           +     ++ GG   +G      F K+G  VL  D+  +               A     V
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN-------------DQADSNILV 47

Query: 70  HCDVTKEKDIENAVNTAVT--QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
             +    +  ++ +    +  Q  ++D +F  AG           +     + ++  ++ 
Sbjct: 48  DGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAG-GWAGGSASSKDFVKNADLMIKQSVW 106

Query: 128 GAFL------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF-- 172
            + +            G   L G    +    +   Y  +K  +  L  + A +      
Sbjct: 107 SSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPD 166

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD-ESKC 231
              V  + P  + TP+ + ++  AD                    +E  L   ++  S+ 
Sbjct: 167 NSAVLTIMPVTLDTPMNRKWMPNADHSSWT----------PLSFISEHLLKWTTETSSRP 216

Query: 232 VSGHNLVVDGG 242
            SG  L +   
Sbjct: 217 SSGALLKITTE 227

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  138 bits (351), Expect = 2e-40
 Identities = 76/255 (29%), Positives = 114/255 (44%), Gaps = 37/255 (14%)

Query: 5   LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSAS 64
           L+ R    +  L+TGG RGIG   AR F+  G KV I                 S     
Sbjct: 14  LVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAIT--------------YRSGEPPE 59

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILS 123
           G   V CD+T  + +E A       +G ++++  NAG T D++   ++   + +F  ++ 
Sbjct: 60  GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQL---LMRMSEEDFTSVVE 116

Query: 124 INLVGAFL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
            NL G F       R ML    G       V G++G A    Y +SK GL+G  ++ A E
Sbjct: 117 TNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARE 176

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSD 227
           LG   I  N V+P  V T + K    L D+    + S +  G    PE+ A    +L SD
Sbjct: 177 LGSRNITFNVVAPGFVDTDMTK---VLTDEQRANIVSQVPLGRYARPEEIAATVRFLASD 233

Query: 228 ESKCVSGHNLVVDGG 242
           ++  ++G  + VDGG
Sbjct: 234 DASYITGAVIPVDGG 248

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  137 bits (348), Expect = 5e-40
 Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 37/251 (14%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
               +  L+TGG RGIG   A+  +  G KV +                  S +  G   
Sbjct: 12  PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVT--------------HRGSGAPKGLFG 57

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLV 127
           V  DVT    ++ A        G ++++ +NAG + D     ++   + +FE++++ NL 
Sbjct: 58  VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF---LMRMTEEKFEKVINANLT 114

Query: 128 GAFL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           GAF       R+M     G       V G+ G      Y +SK G++G+ ++ A EL + 
Sbjct: 115 GAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKA 174

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSDESKC 231
            +  N V+P  + T + +    L +    G    +    V  P + A    +L S+++  
Sbjct: 175 NVTANVVAPGYIDTDMTR---ALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASY 231

Query: 232 VSGHNLVVDGG 242
           +SG  + VDGG
Sbjct: 232 ISGAVIPVDGG 242

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  136 bits (344), Expect = 2e-39
 Identities = 50/231 (21%), Positives = 83/231 (35%), Gaps = 34/231 (14%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L+ K+A++TG   G+G    +  S+      +    + L  ++ +          G   
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHL-AALAEIE--------GVEP 52

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLV 127
           +  D+ KE   E  V+  +     +D + + A    D     I     AE+   L +N++
Sbjct: 53  IESDIVKEVLEEGGVD-KLKNLDHVDTLVHAAAVARDT---TIEAGSVAEWHAHLDLNVI 108

Query: 128 GAFLGRNMLL-------G-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
                   LL       G         G         Y +SKH L GL      E    G
Sbjct: 109 VPAELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNG 168

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL 224
           IRV+ VSP   +TP+ +    L D              +EP++ A A  ++
Sbjct: 169 IRVSTVSPGPTNTPMLQ---GLMDSQGTNFR---PEIYIEPKEIANAIRFV 213

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  135 bits (341), Expect = 7e-39
 Identities = 44/249 (17%), Positives = 90/249 (36%), Gaps = 31/249 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSK---HGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
            L   V ++TG +RG G   A   ++    G+ +L++   + +   + +++G+       
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK- 61

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYG----KLDIMFNNAGTVDEV-KPNILDNDQAEFER 120
                 D+  E  ++  ++           +  ++ NNA T+ +V K  +  ND AE   
Sbjct: 62  VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN 121

Query: 121 ILSINLVGAFLGRNMLLG-----------------VCGIIGGAATHAYTSSKHGLLGLMK 163
             ++NL       +  L                  +C +        Y + K     L +
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQ 181

Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLAKD-FLKLADDGLGGMYSNLK--GAVLEPEDAAEA 220
             A E     +RV   +P  +   + +       D  L      LK  GA+++   +A+ 
Sbjct: 182 VLAAEEP--SVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQK 239

Query: 221 ALYLGSDES 229
            L L   ++
Sbjct: 240 LLGLLQKDT 248

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  134 bits (340), Expect = 1e-38
 Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 29/260 (11%)

Query: 1   MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIGSS 59
            H + M+  +  ++A +TGG  GIG    +   K G +V+              +D  + 
Sbjct: 4   HHHHHMV--MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL 61

Query: 60  SSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEF 118
                       +V      + A +    + G++D++ NNAG T D V        + ++
Sbjct: 62  GFDFYA---SEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVV---FRKMTREDW 115

Query: 119 ERILSINLVGAFL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMK 163
           + ++  NL   F         M+    G       V G  G      Y+++K G+ G   
Sbjct: 116 QAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTM 175

Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAAL 222
           + A E+   G+ VN VSP  + T + K    +  D L  + + +    +  P++      
Sbjct: 176 SLAQEVATKGVTVNTVSPGYIGTDMVK---AIRPDVLEKIVATIPVRRLGSPDEIGSIVA 232

Query: 223 YLGSDESKCVSGHNLVVDGG 242
           +L S+ES   +G +  ++GG
Sbjct: 233 WLASEESGFSTGADFSLNGG 252

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  133 bits (338), Expect = 2e-38
 Identities = 70/252 (27%), Positives = 110/252 (43%), Gaps = 34/252 (13%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSSSSSASGCSYVHC 71
           + ALITG +RGIG   A   ++ G  + I      +  E V ++     S     + +  
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPL--VAVLGA 59

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNIL----DNDQAEFERILSINL 126
           ++ + +     V+ A    G LD + NNAG T D     +L    D D   +E +L  NL
Sbjct: 60  NLLEAEAATALVHQAAEVLGGLDTLVNNAGITRD----TLLVRMKDED---WEAVLEANL 112

Query: 127 VGAFL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
              F       + M+    G       V GI+G      Y +SK GL+G  +  A E  +
Sbjct: 113 SAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQ 172

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSDESK 230
            GI VN V+P  + T + +   +L  +        +  G    PE+ AEA  +L S+++ 
Sbjct: 173 RGITVNAVAPGFIETEMTE---RLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAG 229

Query: 231 CVSGHNLVVDGG 242
            ++G  L VDGG
Sbjct: 230 YITGQTLCVDGG 241

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  133 bits (338), Expect = 2e-38
 Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 41/258 (15%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L GK +LITG + GIG   ARL  K G+KV+I+   ++  +S+   +          +  
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK------DNYTIE 65

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNIL----DNDQAEFERILSI 124
            C++  +++  N ++    +   LDI+  NAG T D     +     D D   F++++ I
Sbjct: 66  VCNLANKEECSNLIS----KTSNLDILVCNAGITSD----TLAIRMKDQD---FDKVIDI 114

Query: 125 NLVGAFL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           NL   F+      + M+    G       + GI G      Y +SK GL+G+ K+ + E+
Sbjct: 115 NLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEV 174

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDE 228
              GI VN V+P  + + +     KL +     +   +       PED A A  +L S+ 
Sbjct: 175 ATRGITVNAVAPGFIKSDMTD---KLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNN 231

Query: 229 SKCVSGHNLVVDGGFAIV 246
           +  ++G  L V+GG  +V
Sbjct: 232 ASYITGQTLHVNGGMLMV 249

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  135 bits (342), Expect = 2e-38
 Identities = 68/278 (24%), Positives = 118/278 (42%), Gaps = 48/278 (17%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            + G+V ++TG   GIG   A  F+  GA+V++    +D+G  +     S  S+A     
Sbjct: 24  VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVV----NDIGVGLDGSPASGGSAAQSVVD 79

Query: 69  -----------VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQA 116
                         +V         + TAV  +G LD++ NNAG    V+  ++ N  + 
Sbjct: 80  EITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGI---VRDRMIANTSEE 136

Query: 117 EFERILSINLVGAFL--------------------GR--NMLLGVCGIIGGAATHAYTSS 154
           EF+ +++++L G F                     GR  N   G  G+ G      Y+++
Sbjct: 137 EFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGA-GLQGSVGQGNYSAA 195

Query: 155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEP 214
           K G+  L    A E+GR+G+ VN ++P A  T + +                     + P
Sbjct: 196 KAGIATLTLVGAAEMGRYGVTVNAIAPSA-RTRMTETVFAEMMATQDQD-----FDAMAP 249

Query: 215 EDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSV 252
           E+ +   ++LGS E++ V+G    V+GG   V  G++ 
Sbjct: 250 ENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAH 287

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  140 bits (354), Expect = 3e-38
 Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 47/260 (18%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG---------ESVCKDIGSS 59
             + KV +ITG   G+G+  +  F+K GAKV++ D+   L          + V  +I  +
Sbjct: 5   DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN 64

Query: 60  SSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEF 118
              A      + +V    D +  V TAV  +G + ++ NNAG +   +   +    + ++
Sbjct: 65  GGVAVAD---YNNVL---DGDKIVETAVKNFGTVHVIINNAGIL---RDASMKKMTEKDY 115

Query: 119 ERILSINLVGAFL--------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMK 163
           + ++ ++L GAF               GR +      G+ G      Y S+K  LLG  +
Sbjct: 116 KLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAE 175

Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
             A E  ++ I+ N ++P A  + + +    +    L           L PE  A   LY
Sbjct: 176 TLAKEGAKYNIKANAIAPLA-RSRMTESI--MPPPML---------EKLGPEKVAPLVLY 223

Query: 224 LGSDESKCVSGHNLVVDGGF 243
           L S E++ ++G    V  GF
Sbjct: 224 LSSAENE-LTGQFFEVAAGF 242

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  124 bits (312), Expect = 2e-32
 Identities = 71/258 (27%), Positives = 116/258 (44%), Gaps = 39/258 (15%)

Query: 1   MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSS 60
             +      L+ KV LITG   G+G+  A+ F+K+GAKV++ D KD        +I ++ 
Sbjct: 311 DASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAG 368

Query: 61  SSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFE 119
             A        DV K  D E  +   + +YG +DI+ NNAG +   +        + E++
Sbjct: 369 GEAWP---DQHDVAK--DSEAIIKNVIDKYGTIDILVNNAGIL---RDRSFAKMSKQEWD 420

Query: 120 RILSINLVGAFL--------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKN 164
            +  ++L+G F               GR + +    GI G      Y+SSK G+LGL K 
Sbjct: 421 SVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKT 480

Query: 165 TAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL 224
            A+E  +  I+VN V+P+A  T +    ++  D             +   +  A   +YL
Sbjct: 481 MAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQD-----------KNLYHADQVAPLLVYL 528

Query: 225 GSDESKCVSGHNLVVDGG 242
           G+D+   V+G    + GG
Sbjct: 529 GTDDVP-VTGETFEIGGG 545

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  133 bits (336), Expect = 5e-38
 Identities = 74/266 (27%), Positives = 124/266 (46%), Gaps = 45/266 (16%)

Query: 3   ANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSS 61
           +++    L  ++AL+TG +RGIG   A   +  GAKV +         + V   I ++  
Sbjct: 19  SHMTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG 78

Query: 62  SASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNIL----DNDQA 116
            A     V  DV++E ++E      + ++G+LD++ NNAG T D     +L     +D  
Sbjct: 79  EAFA---VKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRD----TLLLRMKRDD-- 129

Query: 117 EFERILSINLVGAFL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGL 161
            ++ +L +NL G FL      + ML    G       V G +G      Y+++K G++GL
Sbjct: 130 -WQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGL 188

Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL----EPEDA 217
            K  A EL   GI VN V+P  ++T +     +LA + L      L+   L    E  + 
Sbjct: 189 TKTVAKELASRGITVNAVAPGFIATDMTS---ELAAEKL------LEVIPLGRYGEAAEV 239

Query: 218 AEAALYLGSD-ESKCVSGHNLVVDGG 242
           A    +L +D  +  ++G  + +DGG
Sbjct: 240 AGVVRFLAADPAAAYITGQVINIDGG 265

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  131 bits (331), Expect = 2e-37
 Identities = 73/253 (28%), Positives = 118/253 (46%), Gaps = 30/253 (11%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSSSASGCSYVHC 71
            V ++TG +RGIG+  A    K G KVL+   +     E V K I +    A        
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAIT---FGG 58

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDN-DQAEFERILSINLVGA 129
           DV+KE D+E  + TA+  +G +D++ NNAG T D     +L    +++++ ++ +NL G 
Sbjct: 59  DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRD----TLLIRMKKSQWDEVIDLNLTGV 114

Query: 130 FL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           FL      + M+    G       V G+IG      Y ++K G++G  K  A E     I
Sbjct: 115 FLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNI 174

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYL-GSDESKCV 232
            VN V P  +++ +     KL +D    +   +  G   +PE+ A    +L  S  +  +
Sbjct: 175 NVNVVCPGFIASDMTA---KLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYI 231

Query: 233 SGHNLVVDGGFAI 245
           +G    +DGG AI
Sbjct: 232 TGQAFTIDGGIAI 244

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  130 bits (329), Expect = 2e-37
 Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 54/259 (20%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           + AL+TGGA G+G   A      G +V++ D++ +  +                 YV  D
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGED---------------LIYVEGD 47

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAG------TVDEVKPNILDNDQAEFERILSINL 126
           VT+E+D+  AV  A  +   L  + + AG       + +  P+ L+     F R+L +NL
Sbjct: 48  VTREEDVRRAVARAQ-EEAPLFAVVSAAGVGLAEKILGKEGPHGLE----SFRRVLEVNL 102

Query: 127 VGAFL-----GRNML------LGVCGII----------GGAATHAYTSSKHGLLGLMKNT 165
           +G F         M        G  G+I          G     AY +SK G++ L    
Sbjct: 103 LGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPA 162

Query: 166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--GAVLEPEDAAEAALY 223
           A EL  +GIRV  V+P    TPL +   + A   L          G    PE+ A   L+
Sbjct: 163 ARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLG---RPEEYAALVLH 219

Query: 224 LGSDESKCVSGHNLVVDGG 242
           +   E+  ++G  + +DG 
Sbjct: 220 IL--ENPMLNGEVVRLDGA 236

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  130 bits (330), Expect = 5e-37
 Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 44/260 (16%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSY 68
              +VA +TGG  G+G   +R     G  V ++   ++D   +       +         
Sbjct: 23  QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKA--- 79

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDN-DQAEFERILSINL 126
              DV   +  E      +  +GK+D++ NNAG T D           + +++ ++  +L
Sbjct: 80  YAVDVADFESCERCAEKVLADFGKVDVLINNAGITRD----ATFMKMTKGDWDAVMRTDL 135

Query: 127 VGAFL-----GRNML---LG-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
              F         M+    G       V G  G      Y S+K G+ G  K  A+E  +
Sbjct: 136 DAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAK 195

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAAEAAL 222
            GI VN VSP  ++T + +    +  D        L+  +L          P++ A    
Sbjct: 196 RGITVNTVSPGYLATAMVE---AVPQD-------VLEAKILPQIPVGRLGRPDEVAALIA 245

Query: 223 YLGSDESKCVSGHNLVVDGG 242
           +L SD++  V+G +L ++GG
Sbjct: 246 FLCSDDAGFVTGADLAINGG 265

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  127 bits (322), Expect = 2e-36
 Identities = 48/227 (21%), Positives = 86/227 (37%), Gaps = 30/227 (13%)

Query: 11  QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVH 70
           + KVA+ITG +RGIGE  AR  ++ G  + +     D  E +  ++           Y H
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE--VFYHH 58

Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAF 130
            DV+K + +E      + ++G +D++  NAG        + +  + EF  ++ +NL+G +
Sbjct: 59  LDVSKAESVEEFSKKVLERFGDVDVVVANAGLG--YFKRLEELSEEEFHEMIEVNLLGVW 116

Query: 131 LGRNMLL--------GVCGIIGGAATHA------YTSSKHGLLGLMKNTAVELGRFGIRV 176
                 L                 +         Y S+K     L++   +E     +R 
Sbjct: 117 RTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQIE--NPDVRF 174

Query: 177 NCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
             + P AV T                     +   L+P++ AEA   
Sbjct: 175 FELRPGAVDTYFGGSKPG----------KPKEKGYLKPDEIAEAVRC 211

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  128 bits (323), Expect = 6e-36
 Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 26/242 (10%)

Query: 3   ANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSS 62
           A   + R + ++AL+TG + GIG   AR   + G KV+         E +  +  S+   
Sbjct: 23  ARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP 82

Query: 63  ASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL 122
            +      CD++ E+DI +  +   +Q+  +DI  NNAG        +L    + ++ + 
Sbjct: 83  GT-LIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDT--LLSGSTSGWKDMF 139

Query: 123 SINLVG----------AFLGRNMLLG-------VCG--IIGGAATHAYTSSKHGLLGLMK 163
           ++N++           +   RN+  G       + G  ++  + TH Y+++K+ +  L +
Sbjct: 140 NVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTE 199

Query: 164 NTAVELGRFG--IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAA 221
               EL      IR  C+SP  V T  A        +     Y  +K   L+PED AEA 
Sbjct: 200 GLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKC--LKPEDVAEAV 257

Query: 222 LY 223
           +Y
Sbjct: 258 IY 259

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  127 bits (320), Expect = 4e-35
 Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 49/260 (18%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG---------ESVCKDIGSS 59
           R  G+V L+TG   G+G   A  F++ GA V++ D+  D           + V ++I   
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65

Query: 60  SSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEF 118
              A      +  V      E  V TA+  +G++D++ NNAG +   +          ++
Sbjct: 66  GGKAVAN---YDSVE---AGEKLVKTALDTFGRIDVVVNNAGIL---RDRSFSRISDEDW 116

Query: 119 ERILSINLVGAFL--------------GR--NMLLGVCGIIGGAATHAYTSSKHGLLGLM 162
           + I  ++L G+F               GR         GI G      Y+++K GLLGL 
Sbjct: 117 DIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASAS-GIYGNFGQANYSAAKLGLLGLA 175

Query: 163 KNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL 222
               +E  +  I  N ++P A  + + +    + +D +           L+PE  A   L
Sbjct: 176 NTLVIEGRKNNIHCNTIAPNA-GSRMTETV--MPEDLV---------EALKPEYVAPLVL 223

Query: 223 YLGSDESKCVSGHNLVVDGG 242
           +L  +  +  +G    V  G
Sbjct: 224 WLCHESCE-ENGGLFEVGAG 242

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  129 bits (326), Expect = 5e-35
 Identities = 67/264 (25%), Positives = 112/264 (42%), Gaps = 48/264 (18%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
             + L GKVA++TG ARGIG   A +F++ GA V+  D+          +     +   G
Sbjct: 207 WDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDV------DGAAEDLKRVADKVG 260

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYG-KLDIMFNNAG-TVDEVKPNILDN-DQAEFERIL 122
            + +  DVT +  ++         +G K+DI+ NNAG T D     +L N D+  ++ ++
Sbjct: 261 GTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRD----KLLANMDEKRWDAVI 316

Query: 123 SINLVGAF-----LGRNMLLG----------VCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
           ++NL+        L  N  +G          + GI G      Y ++K G++GL +  A 
Sbjct: 317 AVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAP 376

Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL---------EPEDAA 218
            L   GI +N V+P  + T + +    +            +             +P D A
Sbjct: 377 VLADKGITINAVAPGFIETKMTE---AIPLA--------TREVGRRLNSLFQGGQPVDVA 425

Query: 219 EAALYLGSDESKCVSGHNLVVDGG 242
           E   Y  S  S  V+G+ + V G 
Sbjct: 426 ELIAYFASPASNAVTGNTIRVCGQ 449

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  124 bits (314), Expect = 7e-35
 Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 29/259 (11%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCS 67
            L+GKVAL+TG +RGIG   A+  +  GA V I      +  E    +I S+  SA    
Sbjct: 4   MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFS-- 61

Query: 68  YVHCDVTKEKDIENAVNTAV------TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERI 121
            +  ++     +E   ++        T   K DI+ NNAG +      I +  +  F+R+
Sbjct: 62  -IGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAG-IGPGAF-IEETTEQFFDRM 118

Query: 122 LSINLVGAFL------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
           +S+N    F              R + +      I      AY+ +K  +  +    A +
Sbjct: 119 VSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQ 178

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--GAVLEPEDAAEAALYLGS 226
           LG  GI VN + P  V T +  +   L+D  +    + +     + E ED A+ A +L S
Sbjct: 179 LGARGITVNAILPGFVKTDMNAEL--LSDPMMKQYATTISAFNRLGEVEDIADTAAFLAS 236

Query: 227 DESKCVSGHNLVVDGGFAI 245
            +S+ V+G  + V GG  +
Sbjct: 237 PDSRWVTGQLIDVSGGSCL 255

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  123 bits (310), Expect = 3e-32
 Identities = 61/261 (23%), Positives = 104/261 (39%), Gaps = 49/261 (18%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG---------ESVCKDIGSS 59
           R  G+VA++TG   G+G   A LF++ GAKV++ D+              + V  +I  +
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA 75

Query: 60  SSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTV-DEVKPNILDNDQAEF 118
              A      +  V    D    + TA+  +G++DI+ NNAG + D          + ++
Sbjct: 76  GGEAVA---DYNSVI---DGAKVIETAIKAFGRVDILVNNAGILRDRSLVKT---SEQDW 126

Query: 119 ERILSINLVGAFL--------------GR--NMLLGVCGIIGGAATHAYTSSKHGLLGLM 162
             +  ++L G+F               GR         GI G      YT++K GL+GL 
Sbjct: 127 NLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNS-GIYGNFGQVNYTAAKMGLIGLA 185

Query: 163 KNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL 222
              A+E  R  +  N + P A  + + +    L D              L+P+  A    
Sbjct: 186 NTVAIEGARNNVLCNVIVPTAA-SRMTEGI--LPDILF---------NELKPKLIAPVVA 233

Query: 223 YLGSDESKCVSGHNLVVDGGF 243
           YL  +  +  +G  +    G+
Sbjct: 234 YLCHESCE-DNGSYIESAAGW 253

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  117 bits (295), Expect = 4e-32
 Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 30/237 (12%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M   LQGKVALITG + GIGE TAR  +  GA V IA  + +   ++  ++ ++ +    
Sbjct: 1   MPSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKV-- 58

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPN--ILDNDQAEFERILS 123
              +  DV   + ++ AV + V   G LDI+ NNAG    +     + D D  ++ R++ 
Sbjct: 59  -HVLELDVADRQGVDAAVASTVEALGGLDILVNNAG----IMLLGPVEDADTTDWTRMID 113

Query: 124 INLVG------AFLGRNMLLG---------VCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
            NL+G      A L   +L           + G +       Y ++K G+    +    E
Sbjct: 114 TNLLGLMYMTRAALPH-LLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQE 172

Query: 169 LGRFGIRVNCVSPYAVSTPLAK--DFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
           +   G+RV  + P    T L           +      S ++   L+ +D AEA  Y
Sbjct: 173 VTERGVRVVVIEPGTTDTELRGHITH-TATKEMYEQRISQIRK--LQAQDIAEAVRY 226

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  112 bits (283), Expect = 2e-30
 Identities = 56/256 (21%), Positives = 104/256 (40%), Gaps = 48/256 (18%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           ++ K  L+   +RGIG   A + S+ GA+V I    ++L +             SG  YV
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK------------RSGHRYV 64

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPN-ILDNDQAEFERILSINLV 127
            CD+         ++    +  ++DI+  NAG      K     +    +F+  +    +
Sbjct: 65  VCDLR------KDLDLLFEKVKEVDILVLNAGGP----KAGFFDELTNEDFKEAIDSLFL 114

Query: 128 GAFL--------------GR--NM--LLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
                             GR   +     +  I          S++  L G +K  + E+
Sbjct: 115 NMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLY---TSNSARMALTGFLKTLSFEV 171

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSDE 228
             +GI VNCV+P    T   K+   L+++    + S +    + +PE+ A    +L S++
Sbjct: 172 APYGITVNCVAPGWTETERVKEL--LSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEK 229

Query: 229 SKCVSGHNLVVDGGFA 244
           +  ++G  +VVDGG +
Sbjct: 230 ASYLTGQTIVVDGGLS 245

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  112 bits (283), Expect = 3e-30
 Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 29/231 (12%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           +  KV LITG + GIGE  AR     GAK+L+   +    E++  +I  +  +A      
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTA---LAQ 58

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPN--ILDNDQAEFERILSINLV 127
             DVT    +      AV  +G++D++ NNAG    V P   +      E+ER++ +N+ 
Sbjct: 59  VLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAG----VMPLSPLAAVKVDEWERMIDVNIK 114

Query: 128 GAFLGRNMLL--------G-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           G   G   +L        G       +  +        Y ++K  +  +      E    
Sbjct: 115 GVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQEST-- 172

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
            IRV CV+P  V + LA     +  +         +   L+P D A A   
Sbjct: 173 NIRVTCVNPGVVESELA---GTITHEETMAAMDTYRAIALQPADIARAVRQ 220

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  107 bits (269), Expect = 7e-29
 Identities = 35/192 (18%), Positives = 61/192 (31%), Gaps = 41/192 (21%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
               L+ G +  +G        K  A+V+ A              G  S        V  
Sbjct: 3   AMKILLIGASGTLGSAVKERLEK-KAEVITA--------------GRHSGD------VTV 41

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           D+T    I+        Q GK+D + +  G+     P + +    +    +S  L G   
Sbjct: 42  DITNIDSIKKMYE----QVGKVDAIVSATGSA-TFSP-LTELTPEKNAVTISSKLGGQIN 95

Query: 132 GRNMLL-------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNC 178
              + +             G+          +   +   +    K+ A+E+ R GIR+N 
Sbjct: 96  LVLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINT 154

Query: 179 VSPYAVSTPLAK 190
           VSP  +     K
Sbjct: 155 VSPNVLEESWDK 166

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  108 bits (273), Expect = 8e-29
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 30/235 (12%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M R    K+ +ITG + GIGE  AR FS+ G  +L+   + +  +++         +   
Sbjct: 10  MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL---------NLPN 60

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
                 DVT +   + A+  A   YG  D + NNAG +  +   I   +  E++R+  +N
Sbjct: 61  TLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMM--LLGQIDTQEANEWQRMFDVN 118

Query: 126 LVGAFLGRNMLL--------G-------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           ++G   G   +L        G       + G        AY  +K  +  + +N   E+ 
Sbjct: 119 VLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVA 178

Query: 171 RFGIRVNCVSPYAVSTPLAK--DFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
              +RV  ++P AV T L       +   DG      ++ G  L  +D A A L+
Sbjct: 179 ASNVRVMTIAPSAVKTELLSHTTS-QQIKDGYDAWRVDMGGV-LAADDVARAVLF 231

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  108 bits (273), Expect = 1e-28
 Identities = 47/237 (19%), Positives = 85/237 (35%), Gaps = 24/237 (10%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAK----VLIADIKDDLGESVCKDIGSSSS 61
              RL  K  LITG + GIG+ TA  + +        +L A   + L E + K I     
Sbjct: 27  AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKL-EELKKTIDQEFP 85

Query: 62  SASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERI 121
           +A        D+T+ + I+  +     ++  +DI+ NNAG        +      + + +
Sbjct: 86  NAK-VHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDR-VGQIATEDIQDV 143

Query: 122 LSINLVGAFLGRNMLLG---------------VCGIIGGAATHAYTSSKHGLLGLMKNTA 166
              N+         +L                + G         Y +SK  +     +  
Sbjct: 144 FDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLR 203

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
            EL    IRV  ++P  V T  +    +  ++    +Y +     L  +D A+  +Y
Sbjct: 204 KELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTP--LMADDVADLIVY 258

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  108 bits (272), Expect = 2e-28
 Identities = 41/231 (17%), Positives = 82/231 (35%), Gaps = 23/231 (9%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
                   ITG   G GE  AR F++ G  +++   +++  +++  ++     + +    
Sbjct: 18  SHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELS----AKTRVLP 73

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  DV     +  AV+    ++  L  + NNAG      P     D  +++ ++  N+ G
Sbjct: 74  LTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDP-AQSCDLDDWDTMVDTNIKG 132

Query: 129 ------AFL------GRNMLLGVCGIIGGAATHA----YTSSKHGLLGLMKNTAVELGRF 172
                   L      G    +   G + G   +     Y  +K  +     N   +L   
Sbjct: 133 LLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGT 192

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
           G+RV  + P    +  +              Y+      ++PED AE   +
Sbjct: 193 GVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAH--PIQPEDIAETIFW 241

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  103 bits (259), Expect = 3e-27
 Identities = 40/220 (18%), Positives = 73/220 (33%), Gaps = 39/220 (17%)

Query: 15  ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT 74
            LITG   G+G   AR     G  +L++  +      + +++G           +  D+ 
Sbjct: 3   VLITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREVG--------ARALPADLA 52

Query: 75  KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL--- 131
            E          + + G LD++ +  G        + +  +   E +L+ +L+ A     
Sbjct: 53  DE----LEAKALLEEAGPLDLLVHAVG-KAGRAS-VREAGRDLVEEMLAAHLLTAAFVLK 106

Query: 132 -----GRNMLLGVC---GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYA 183
                     +        +      AY ++K  L   ++    EL R G+ +  V   A
Sbjct: 107 HARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPA 166

Query: 184 VSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
           V+T               G  S        PE+AA   L 
Sbjct: 167 VATG----LWAPLGGPPKGALS--------PEEAARKVLE 194

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =   99 bits (250), Expect = 1e-25
 Identities = 37/226 (16%), Positives = 79/226 (34%), Gaps = 37/226 (16%)

Query: 13  KVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
            + +ITG + G+G   A+L+   G    L    +  L  +V   + ++        Y   
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKL-STVTNCLSNN------VGYRAR 54

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           D+   +++E               + ++AG+       + + D  + + ++  NL  A  
Sbjct: 55  DLASHQEVEQLFEQL---DSIPSTVVHSAGSG--YFGLLQEQDPEQIQTLIENNLSSAIN 109

Query: 132 GRNMLL--------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVN 177
               L+                      A    Y + K  + GL+++  +EL    +++ 
Sbjct: 110 VLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKII 169

Query: 178 CVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY 223
            V P  ++T    +F + +   L         + +  EDAA     
Sbjct: 170 AVYPGGMAT----EFWETSGKSLDTS------SFMSAEDAALMIHG 205

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 98.7 bits (246), Expect = 2e-24
 Identities = 42/205 (20%), Positives = 77/205 (37%), Gaps = 36/205 (17%)

Query: 11  QGKVALITGGARGIGECTARLFSKHGAKVLIA---DIKDDLGESVCKDIGSSSSSASGCS 67
             K+ LITG + G G  TA   +  G +V  A   DI      +V    G +  +     
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRV-YASMRDIVGRNASNVEAIAGFARDNDVDLR 62

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERIL 122
            +  DV  +  ++ A++  + + G++D++ +NAG       +            +F  + 
Sbjct: 63  TLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAF-------TPEQFAELY 115

Query: 123 SINLVG------AFL--------GR--NM--LLGVCGIIGGAATHAYTSSKHGLLGLMKN 164
            IN++       A L        G    +       G     A   Y ++K  +  +   
Sbjct: 116 DINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLA--PYFAAKAAMDAIAVQ 173

Query: 165 TAVELGRFGIRVNCVSPYAVSTPLA 189
            A EL R+GI  + + P A ++   
Sbjct: 174 YARELSRWGIETSIIVPGAFTSGTN 198

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 94.1 bits (235), Expect = 2e-23
 Identities = 52/233 (22%), Positives = 85/233 (36%), Gaps = 39/233 (16%)

Query: 14  VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDV 73
           + L+TG   G GEC  R F + G KV+    + +  + +  ++G +            DV
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDN------LYIAQLDV 55

Query: 74  TKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG----- 128
                IE  + +   ++  +DI+ NNAG    ++P        ++E ++  N  G     
Sbjct: 56  RNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEP-AHKASVEDWETMIDTNNKGLVYMT 114

Query: 129 -AFLGRNMLLGVCGII-------------GGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
            A L   M+    G I             GG     Y ++K  +     N   +L    +
Sbjct: 115 RAVLPG-MVERNHGHIINIGSTAGSWPYAGGN---VYGATKAFVRQFSLNLRTDLHGTAV 170

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDG----LGGMYSNLKGAVLEPEDAAEAALY 223
           RV  + P  V       F  +   G        Y N     L PED +EA  +
Sbjct: 171 RVTDIEPGLVGGTE---FSNVRFKGDDGKAEKTYQNTVA--LTPEDVSEAVWW 218

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 94.6 bits (236), Expect = 3e-23
 Identities = 55/245 (22%), Positives = 87/245 (35%), Gaps = 56/245 (22%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIA-----DIKDDLGESVCKDIGSSSSSASGCS 67
           KV L+TG + G G   A      G  V I      +  DDL           ++      
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTV-IGTARRTEALDDL----------VAAYPDRAE 54

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERIL 122
            +  DVT  + I+      + +YG++D++ NNAG       +E         + E   + 
Sbjct: 55  AISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEET-------TERELRDLF 107

Query: 123 SINLVG------AFL--------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAV 167
            +++ G      A L        G  + +    G +  A   AY+++K  L  L +  A 
Sbjct: 108 ELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLAD 167

Query: 168 ELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE------------PE 215
           E+  FGI+V  V P A  T L         +     Y+   G   +            P 
Sbjct: 168 EVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPA-YAEKVGPTRQLVQGSDGSQPGDPA 226

Query: 216 DAAEA 220
            AA A
Sbjct: 227 KAAAA 231

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 87.8 bits (218), Expect = 2e-20
 Identities = 49/249 (19%), Positives = 83/249 (33%), Gaps = 53/249 (21%)

Query: 13  KVALITGGARGIGECTARLFSK---HGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
            V LITG + GIG   A   +       KV            + +   + +        +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----TVDEVKPNILDNDQAEFERILSI 124
             DV   K +  A        G++D++  NAG      ++ +        +     +L +
Sbjct: 63  QLDVRDSKSVAAARERVT--EGRVDVLVCNAGLGLLGPLEAL-------GEDAVASVLDV 113

Query: 125 NLVG------AFL--------GR--NM--LLGVCGIIGGAATHAYTSSKHGLLGLMKNTA 166
           N+VG      AFL        GR      + G+ G+        Y +SK  L GL ++ A
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDV---YCASKFALEGLCESLA 170

Query: 167 VELGRFGIRVNCVSPYAVSTPLA----KDFLKLADDGLGGMYSNLKGAV----------- 211
           V L  FG+ ++ +    V T           ++ D      +      +           
Sbjct: 171 VLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAA 230

Query: 212 LEPEDAAEA 220
             PE+ AE 
Sbjct: 231 QNPEEVAEV 239

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 85.9 bits (213), Expect = 4e-20
 Identities = 47/251 (18%), Positives = 77/251 (30%), Gaps = 54/251 (21%)

Query: 5   LMLRRLQGKVALITGGARGIGECTARLFSKHGAKV--LIADIKDDLGESVCKDIGSSSSS 62
           L+ R       LITG  RG+G    +           L    ++       K++   + +
Sbjct: 14  LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRN---REQAKELEDLAKN 70

Query: 63  ASGCSYVHCDVTKEKDIENAVNT--AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFER 120
            S    +  D+      +  V     VT+   L+++FNNAG   +    I      E   
Sbjct: 71  HSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSAR-ITAVRSQELLD 129

Query: 121 ILSINLVGAFL-----------------GRNMLLGVCGII------------GGAATHAY 151
            L  N V   +                  + M +G   II                 +AY
Sbjct: 130 TLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAY 189

Query: 152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAV 211
            +SK  L    K+ +V+L    I    + P  V T             +GG       A 
Sbjct: 190 RTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKT------------DMGG-----SSAP 232

Query: 212 LEPEDAAEAAL 222
           L+   +    +
Sbjct: 233 LDVPTSTGQIV 243

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 82.0 bits (203), Expect = 7e-19
 Identities = 43/249 (17%), Positives = 71/249 (28%), Gaps = 65/249 (26%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSS----SASGCSY 68
              ++TG  RGIG    +   K      I         +  +D+  ++       S    
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHII--------ATARDVEKATELKSIKDSRVHV 55

Query: 69  VHCDVTKEKDIENAVNTAVTQYG--KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
           +   VT +K ++  V+      G   L ++ NNAG +        + ++A     L +N 
Sbjct: 56  LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLS-YGTNTEPNRAVIAEQLDVNT 114

Query: 127 VG------AFL----------GRNMLLGVCGII-----------------GGAATHAYTS 153
                     L            + L      +                       AY  
Sbjct: 115 TSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRM 174

Query: 154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE 213
           SK  +    +  AV+L    + V    P  V T             LGG     K A L 
Sbjct: 175 SKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQT------------NLGG-----KNAALT 217

Query: 214 PEDAAEAAL 222
            E +    +
Sbjct: 218 VEQSTAELI 226

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 83.1 bits (205), Expect = 8e-19
 Identities = 36/185 (19%), Positives = 63/185 (34%), Gaps = 32/185 (17%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
             + + A++TGG +GIG    +  S +G  V++       G    + +   +S+     +
Sbjct: 9   VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL--KNSNHENVVF 66

Query: 69  VHCDVTKEKD-IENAVNTAVTQYGKLDIMFNNAG-------------------------- 101
              DVT     + +  +   T +GKLDI+ NNAG                          
Sbjct: 67  HQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELV 126

Query: 102 --TVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLL 159
                     ++       E  L IN  G      +L+ +   +  +      SS  G L
Sbjct: 127 KIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL-QLSDSPRIVNVSSSTGSL 185

Query: 160 GLMKN 164
             + N
Sbjct: 186 KYVSN 190

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 44.2 bits (104), Expect = 2e-05
 Identities = 19/85 (22%), Positives = 28/85 (32%), Gaps = 19/85 (22%)

Query: 150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKG 209
           AYT+SK  L    +  A ++     +VNCV P  V T +                     
Sbjct: 235 AYTTSKACLNAYTRVLANKIP--KFQVNCVCPGLVKTEMNYGI----------------- 275

Query: 210 AVLEPEDAAEAALYLGSDESKCVSG 234
                E+ AE  + +        SG
Sbjct: 276 GNYTAEEGAEHVVRIALFPDDGPSG 300

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 81.3 bits (201), Expect = 2e-18
 Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 10/129 (7%)

Query: 12  GKVALITGGARGIGECTAR-LFSKHGAKVLIA--DIKDDLGESVCKDIGSSSSSASGCSY 68
             VAL+TGG +GIG    R L       V++   D+    G++  + + +   S     +
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVT--RGQAAVQQLQAEGLSPR---F 58

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              D+   + I    +    +YG LD++ NNAG     K         + E  +  N  G
Sbjct: 59  HQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA--FKVADPTPFHIQAEVTMKTNFFG 116

Query: 129 AFLGRNMLL 137
                  LL
Sbjct: 117 TRDVCTELL 125

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 70.0 bits (172), Expect = 2e-14
 Identities = 57/269 (21%), Positives = 101/269 (37%), Gaps = 49/269 (18%)

Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESV---CKDIGSSSSSAS 64
           L+ K  +I G A  R I    A++  + GAK++    K+   + +    + +    +   
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAH-- 87

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLD-----IMFNNAGTVDEVKPNILDNDQAEFE 119
                  DV  ++++ N         G +D     I F N    ++++    +  +  F 
Sbjct: 88  ---LYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANM---EDLRGRFSETSREGFL 141

Query: 120 RILSIN---LVG-AFLGRNMLLGVCGIIGGAA-THAYTSS-------------KHGLLGL 161
               I+   L   A   + ++       GG+     Y                K  L   
Sbjct: 142 LAQDISSYSLTIVAHEAKKLMPE-----GGSIVATTYLGGEFAVQNYNVMGVAKASLEAN 196

Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLA----KDFLKLADDGLGGMYSNLKGAVLEPEDA 217
           +K  A++LG   IRVN +S   + T L+      F  +  +      + LK  V +  + 
Sbjct: 197 VKYLALDLGPDNIRVNAISAGPIRT-LSAKGVGGFNTILKEI--EERAPLKRNV-DQVEV 252

Query: 218 AEAALYLGSDESKCVSGHNLVVDGGFAIV 246
            + A YL SD S  V+G N+ VD GF  +
Sbjct: 253 GKTAAYLLSDLSSGVTGENIHVDSGFHAI 281

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 70.0 bits (172), Expect = 3e-14
 Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 48/268 (17%)

Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESV---CKDIGSSSSSAS 64
           L+GK ALITG A  R I    A+ F + GA++        L + V    K  GS      
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDL---- 74

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLD-----IMFNNAGTVDEVKPNILDNDQAEFE 119
               V CDV+ ++DI+N        +G LD     I +      +E K  ++D  +  F+
Sbjct: 75  ---VVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPK---EEFKGGVIDTSREGFK 128

Query: 120 RILSIN---LVG-AFLGRNMLLGVCGIIGGAATHAYTSS-------------KHGLLGLM 162
             + I+   L+        ++ G  G I    T +Y  +             K  L   +
Sbjct: 129 IAMDISVYSLIALTRELLPLMEGRNGAI---VTLSYYGAEKVVPHYNVMGIAKAALESTV 185

Query: 163 KNTAVELGRFGIRVNCVSPYAVSTPLA----KDFLKLADDGLGGMYSNLKGAVLEPEDAA 218
           +  A ++ + G R+N +S   V T LA      F  L +       +     +   ED  
Sbjct: 186 RYLAYDIAKHGHRINAISAGPVKT-LAAYSITGFHLLMEHT--TKVNPFGKPI-TIEDVG 241

Query: 219 EAALYLGSDESKCVSGHNLVVDGGFAIV 246
           + A++L SD ++ ++G  + VD G+ I+
Sbjct: 242 DTAVFLCSDWARAITGEVVHVDNGYHIM 269

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 69.5 bits (171), Expect = 3e-14
 Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 51/274 (18%)

Query: 5   LMLRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESV---CKDIGSS 59
           ++   L GK AL+ G    R +G   A    + GA+V ++   + L        + +G +
Sbjct: 1   MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGA 60

Query: 60  SSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIM-----FNNAGTVDEVKPNILDND 114
                       DVT++++++         +G LD +     F      + ++   +D  
Sbjct: 61  L-------LFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPR---EAMEGRYIDTR 110

Query: 115 QAEFERILSIN---LVG-AFLGRNMLLGVCGIIGGAA-THAYTSS-------------KH 156
           + ++   L ++   LV  A     +L       GG   T  Y +S             K 
Sbjct: 111 RQDWLLALEVSAYSLVAVARRAEPLLRE-----GGGIVTLTYYASEKVVPKYNVMAIAKA 165

Query: 157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA----KDFLKLADDGLGGMYSNLKGAVL 212
            L   ++  A ELG  G+RVN +S   V T +A      F K+ D       + L+  + 
Sbjct: 166 ALEASVRYLAYELGPKGVRVNAISAGPVRT-VAARSIPGFTKMYDRV--AQTAPLRRNI- 221

Query: 213 EPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV 246
             E+     L+L S  +  ++G  + VD G+ I+
Sbjct: 222 TQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIM 255

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 68.8 bits (169), Expect = 6e-14
 Identities = 67/273 (24%), Positives = 97/273 (35%), Gaps = 52/273 (19%)

Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESV---CKDIGSSSSSAS 64
           L GK  L+TG    R I    A+   + GA++    + D   + +     + GS      
Sbjct: 12  LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSEL---- 67

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLD-----IMFNNAGTVDEVKPNILDNDQAE-F 118
                 CDV  +  I+    +  T +  LD     I F      + +  + LD    E F
Sbjct: 68  ---VFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPR---EAIAGDFLDGLTRENF 121

Query: 119 ERILSIN---LVG-AFLGRNMLLGVCGIIGGAA-THAYTSS-------------KHGLLG 160
                I+       A     ML         +  T +Y  +             K  L  
Sbjct: 122 RIAHDISAYSFPALAKAALPMLSD-----DASLLTLSYLGAERAIPNYNTMGLAKAALEA 176

Query: 161 LMKNTAVELGRFGIRVNCVSPYAVSTPLA----KDFLKLADDGLGGMYSNLKGAVLEPED 216
            ++  AV LG  G+RVN +S   + T LA    K F K+ D       S LK  V   E 
Sbjct: 177 SVRYLAVSLGAKGVRVNAISAGPIKT-LAASGIKSFGKILDFV--ESNSPLKRNV-TIEQ 232

Query: 217 AAEAALYLGSDESKCVSGHNLVVDGGFAIVNAG 249
              A  +L SD +  V+   + VD GF  V  G
Sbjct: 233 VGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGG 265

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 68.8 bits (169), Expect = 6e-14
 Identities = 63/269 (23%), Positives = 107/269 (39%), Gaps = 51/269 (18%)

Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESV---CKDIGSSSSSAS 64
           ++GK  +I G A  + +    A+     GA+V +  + +   + V    + +G       
Sbjct: 28  MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKL---- 83

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIM-----FNNAGTVDEVKPNILDNDQAEFE 119
               V CDV+  + ++N       ++G LD +     F++    +E+K   +D     F 
Sbjct: 84  ---TVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDK---NELKGRYVDTSLGNFL 137

Query: 120 RILSIN---LVG-AFLGRNMLLGVCGIIGGAA-THAYTSS-------------KHGLLGL 161
             + I+       A     ++       GG+  T +Y  +             K  L   
Sbjct: 138 TSMHISCYSFTYIASKAEPLMTN-----GGSILTLSYYGAEKVVPHYNVMGVCKAALEAS 192

Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLA----KDFLKLADDGLGGMYSNLKGAVLEPEDA 217
           +K  AV+LG+  IRVN +S   V T LA     DF  +         S L+      +D 
Sbjct: 193 VKYLAVDLGKQQIRVNAISAGPVRT-LASSGISDFHYILTWN--KYNSPLRRNT-TLDDV 248

Query: 218 AEAALYLGSDESKCVSGHNLVVDGGFAIV 246
             AALYL SD  +  +G  + VD G+ +V
Sbjct: 249 GGAALYLLSDLGRGTTGETVHVDCGYHVV 277

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 68.4 bits (168), Expect = 7e-14
 Identities = 69/273 (25%), Positives = 110/273 (40%), Gaps = 49/273 (17%)

Query: 6   MLRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESV---CKDIGSSS 60
           M   L+G+  ++ G A  R I    AR   + GA+++     + L +SV      +  + 
Sbjct: 1   MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRND 60

Query: 61  SSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLD-----IMFNNAGTVDEVKPNILDNDQ 115
           S       + CDVT + +IE    +   Q G +      I F N    +E+    L+ ++
Sbjct: 61  SI-----ILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANK---EELVGEYLNTNR 112

Query: 116 AEFERILSIN---LVG-AFLGRNMLLGVCGIIGGAA-THAYTSS-------------KHG 157
             F    +I+   L       R M+       GG+  T  Y                K  
Sbjct: 113 DGFLLAHNISSYSLTAVVKAARPMMTE-----GGSIVTLTYLGGELVMPNYNVMGVAKAS 167

Query: 158 LLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA----KDFLKLADDGLGGMYSNLKGAVLE 213
           L   +K  A +LG+  IRVN +S   + T L+     DF  +  D      + L+     
Sbjct: 168 LDASVKYLAADLGKENIRVNSISAGPIRT-LSAKGISDFNSILKDI--EERAPLRRTT-T 223

Query: 214 PEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV 246
           PE+  + A +L SD S+ ++G NL VD GF I 
Sbjct: 224 PEEVGDTAAFLFSDMSRGITGENLHVDSGFHIT 256

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 68.4 bits (168), Expect = 9e-14
 Identities = 65/269 (24%), Positives = 106/269 (39%), Gaps = 50/269 (18%)

Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIA---DIKDDLGESVCKDIGSSSSSAS 64
           L GK  LITG    + I    A+   + GA++        KD + E +C +   ++    
Sbjct: 24  LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRV-EKLCAEFNPAA---- 78

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLD-----IMFNNAGTVDEVKPNILDNDQAE-F 118
               + CDV  +++I++        +  LD     I F      D+++ N +D    E F
Sbjct: 79  ---VLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPR---DQLEGNFIDCVTREGF 132

Query: 119 ERILSIN---LVG-AFLGRNMLLGVCGIIGGAATHAYTSS-------------KHGLLGL 161
                I+       A  GR+M+      +       Y  +             K  L   
Sbjct: 133 SIAHDISAYSFAALAKEGRSMMKNRNASM---VALTYIGAEKAMPSYNTMGVAKASLEAT 189

Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLA----KDFLKLADDGLGGMYSNLKGAVLEPEDA 217
           ++ TA+ LG  GI+VN VS   + T LA     +F K+ D     M S LK  V +  + 
Sbjct: 190 VRYTALALGEDGIKVNAVSAGPIKT-LAASGISNFKKMLDYN--AMVSPLKKNV-DIMEV 245

Query: 218 AEAALYLGSDESKCVSGHNLVVDGGFAIV 246
                +L SD +  ++G  + VD G+  V
Sbjct: 246 GNTVAFLCSDMATGITGEVVHVDAGYHCV 274

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 67.7 bits (166), Expect = 1e-13
 Identities = 67/269 (24%), Positives = 107/269 (39%), Gaps = 51/269 (18%)

Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESV---CKDIGSSSSSAS 64
           LQGK  LI G A  R I    A+   + GA++      D L + V    +++G+      
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFV---- 84

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIM-----FNNAGTVDEVKPNILDNDQAEFE 119
                HCDV     I+    T   ++GKLD +     F++    DE+    +D  +A F 
Sbjct: 85  ---AGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDK---DELTGRYIDTSEANFT 138

Query: 120 RILSIN---LVG-AFLGRNMLLGVCGIIGGAA-THAYTSS-------------KHGLLGL 161
             + I+   L   +     ++       GG+  T  Y  +             K  L   
Sbjct: 139 NTMLISVYSLTAVSRRAEKLMAD-----GGSILTLTYYGAEKVMPNYNVMGVAKAALEAS 193

Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLA----KDFLKLADDGLGGMYSNLKGAVLEPEDA 217
           +K  AV+LG   IRVN +S   + T LA     DF  +         + L+  V   ++ 
Sbjct: 194 VKYLAVDLGPQNIRVNAISAGPIKT-LAASGIGDFRYILKWN--EYNAPLRRTV-TIDEV 249

Query: 218 AEAALYLGSDESKCVSGHNLVVDGGFAIV 246
            +  LY  SD S+ V+G     D G+ ++
Sbjct: 250 GDVGLYFLSDLSRSVTGEVHHADSGYHVI 278

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 67.2 bits (165), Expect = 2e-13
 Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 51/269 (18%)

Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESV---CKDIGSSSSSAS 64
           L+GK  LI G A  + I    A+     GA +    + + L + V    +++ S      
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPY---- 59

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLD-----IMFNNAGTVDEVKPNILDNDQAEFE 119
                  DV+KE+  ++  N+     G LD     + F      + ++ ++L+  ++ F 
Sbjct: 60  ---VYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPK---EALEGSLLETSKSAFN 113

Query: 120 RILSIN---LVG-AFLGRNMLLGVCGIIGGAA-THAYTSS-------------KHGLLGL 161
             + I+   L+      + +L       G +  T +Y  S             K  L   
Sbjct: 114 TAMEISVYSLIELTNTLKPLLNN-----GASVLTLSYLGSTKYMAHYNVMGLAKAALESA 168

Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLA----KDFLKLADDGLGGMYSNLKGAVLEPEDA 217
           ++  AV+LG+  IRVN +S   + T LA     DF  +       + + L+  V   E+ 
Sbjct: 169 VRYLAVDLGKHHIRVNALSAGPIRT-LASSGIADFRMILKWN--EINAPLRKNV-SLEEV 224

Query: 218 AEAALYLGSDESKCVSGHNLVVDGGFAIV 246
             A +YL S  S  VSG    VD G+ ++
Sbjct: 225 GNAGMYLLSSLSSGVSGEVHFVDAGYHVM 253

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 66.0 bits (162), Expect = 5e-13
 Identities = 69/270 (25%), Positives = 105/270 (38%), Gaps = 52/270 (19%)

Query: 10  LQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESV---CKDIGSSSSSAS 64
           L GK  L+TG A    I    A+   + GA++      D L   V      +GS      
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI---- 62

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLD-----IMFNNAGTVDEVKPNILDNDQAE-F 118
               + CDV ++  I+         + K D     I F      D++  + ++    E F
Sbjct: 63  ---VLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPG---DQLDGDYVNAVTREGF 116

Query: 119 ERILSIN---LVG-AFLGRNMLLGVCGIIGGAA-THAYTSS-------------KHGLLG 160
           +    I+    V  A   R+ML       G A  T +Y  +             K  L  
Sbjct: 117 KIAHDISSYSFVAMAKACRSMLNP-----GSALLTLSYLGAERAIPNYNVMGLAKASLEA 171

Query: 161 LMKNTAVELGRFGIRVNCVSPYAVSTPLA----KDFLKLADDGLGGMYSNLKGAVLEPED 216
            ++  A  +G  G+RVN +S   + T LA    KDF K+         + ++  V   ED
Sbjct: 172 NVRYMANAMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHC--EAVTPIRRTV-TIED 227

Query: 217 AAEAALYLGSDESKCVSGHNLVVDGGFAIV 246
              +A +L SD S  +SG  + VDGGF+I 
Sbjct: 228 VGNSAAFLCSDLSAGISGEVVHVDGGFSIA 257

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 63.0 bits (153), Expect = 8e-12
 Identities = 20/122 (16%), Positives = 42/122 (34%), Gaps = 11/122 (9%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
               ++GK A++  G   +G  +A L +  GA+V++   K D  ++    +         
Sbjct: 113 AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVN----KRFK 168

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
            +    +   +     AV  A         +F       E+ P     +++  E +   N
Sbjct: 169 VNVTAAETADDASRAEAVKGA-------HFVFTAGAIGLELLPQAAWQNESSIEIVADYN 221

Query: 126 LV 127
             
Sbjct: 222 AQ 223

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 53/258 (20%), Positives = 82/258 (31%), Gaps = 66/258 (25%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
               +  +ITG   G+G  TAR  ++ GA V++A      GE+  + +            
Sbjct: 13  SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ------VEV 66

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG--------TVDEVKPNILDNDQAEFER 120
              D+    D+ + V          D++ NNAG        TVD             FE 
Sbjct: 67  RELDLQ---DLSS-VRRFADGVSGADVLINNAGIMAVPYALTVD------------GFES 110

Query: 121 ILSINLVGAFLGRNMLLGVCG---IIGGAATH---------------------AYTSSKH 156
            +  N +G F   N+LL       +   +  H                     AY+ SK 
Sbjct: 111 QIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSK- 169

Query: 157 GLLGLMKNTAVELGR------FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGA 210
            L  L+     EL R        +R     P    T L     +   D L    + +   
Sbjct: 170 -LANLL--FTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRV--V 224

Query: 211 VLEPEDAAEAALYLGSDE 228
             + +  A   LY  S +
Sbjct: 225 ATDADFGARQTLYAASQD 242

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 61.3 bits (149), Expect = 3e-11
 Identities = 51/309 (16%), Positives = 95/309 (30%), Gaps = 90/309 (29%)

Query: 6   MLRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLI---------------------A 42
           +   L+GK A I G A   G G   A+  +  GA++L+                     +
Sbjct: 2   LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS 61

Query: 43  DIKDDLGESVCKDIGSSSSSASGCSYVHCDV--------TKEKDIENAVNTAVTQYGKLD 94
            +  D      K +    +       V  DV        +    ++ A       +G +D
Sbjct: 62  RVLPDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSID 121

Query: 95  IMFNNAGTVDEVKPNILDNDQAEFERILSI----------------NLVGAFL------- 131
           I+ ++     EV   +L+  +  +   +S                 N  GA +       
Sbjct: 122 ILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIAS 181

Query: 132 -----GRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG-RFGIRVNCVSPYAVS 185
                G    +                 K  L    +  A E G +  IRVN +S   + 
Sbjct: 182 ERIIPGYGGGMSSA--------------KAALESDTRVLAFEAGRKQNIRVNTISAGPLG 227

Query: 186 TPLAKDFLKLADDGLGGMYSNLK--------GAVLEPEDAAEAALYLGSDESKCVSGHNL 237
           +         A   +G + + ++           L  ++   AA +L S  +  ++G  +
Sbjct: 228 S--------RAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATI 279

Query: 238 VVDGGFAIV 246
            VD G   +
Sbjct: 280 YVDNGLNSM 288

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 60.6 bits (147), Expect = 5e-11
 Identities = 58/309 (18%), Positives = 100/309 (32%), Gaps = 79/309 (25%)

Query: 3   ANLMLRRLQGKVALITGGA--RGIGECTARLFSKHGAKV--------LIADIKDDLGESV 52
           +   +  L+G+ A + G A   G G   A+  +  GA+V        L    K      +
Sbjct: 1   SAFPID-LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRL 59

Query: 53  CKDIGSSSSSASGCSYV-------------HCDVTKEK--------DIENAVNTAVTQYG 91
            +D      S    + V               D+   K         I+          G
Sbjct: 60  DEDRKLPDGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLG 119

Query: 92  KLDIMFNNAGTVDEVKPNILDNDQAEFERILSI---NLVG-AFLGRNMLLGVCGIIGGAA 147
            +DI+ ++     EV   +L+  +  +    S    + V        ++       GG+A
Sbjct: 120 NIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNE-----GGSA 174

Query: 148 -THAYTSSK------HGLLGLMKNT--------AVELG-RFGIRVNCVSPYAVSTPLAKD 191
            T +Y +++       G +   K          A E G ++G+RVN +S   + +     
Sbjct: 175 VTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKS----- 229

Query: 192 FLKLADDGLGGMYSNLK--------------GAVLEPEDAAEAALYLGSDESKCVSGHNL 237
               A   +G                        L  +D   AAL+L S  ++ VSG  L
Sbjct: 230 ---RAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTL 286

Query: 238 VVDGGFAIV 246
            VD G   +
Sbjct: 287 YVDNGLHAM 295

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 15/94 (15%)

Query: 166 AVELGRFGIRVNCVSPYAVST-------------PLAKDFLKLADDGLGGMYSNLKGAVL 212
           A E G++G+R N V+   + T                     L +       + +   + 
Sbjct: 176 AREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGW--DQRAPIGWNMK 233

Query: 213 EPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV 246
           +    A+    L SD     +G  +  DGG    
Sbjct: 234 DATPVAKTVCALLSDWLPATTGDIIYADGGAHTQ 267

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 38.7 bits (91), Expect = 8e-04
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 12/96 (12%)

Query: 6  MLRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDD-LGESVCKDIGSSSSS 62
          M   L GK  L++G      I    AR+  + GA++++       L + +   + + +  
Sbjct: 1  MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAP- 59

Query: 63 ASGCSYVHCDVTKEKDIENAVNTAVTQYG---KLDI 95
                +  DV  E+ + +         G   KLD 
Sbjct: 60 -----LLELDVQNEEHLASLAGRVTEAIGAGNKLDG 90

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 55.2 bits (133), Expect = 3e-09
 Identities = 55/328 (16%), Positives = 88/328 (26%), Gaps = 109/328 (33%)

Query: 6   MLRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSA 63
           +   L+GK A + G A   G G    +L    GA+VL+                S     
Sbjct: 3   LPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQD 62

Query: 64  SGCSY----------------------------------VHCDVTKEK--------DIEN 81
           S  +                                   V  +V+  K         I  
Sbjct: 63  SFYAQEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISE 122

Query: 82  AVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI----------------N 125
                    G++DI+ ++     EV   +L   +  +   +S                  
Sbjct: 123 VAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMK 182

Query: 126 LVGAFL------------GRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR-F 172
             G+ L            G    +                 K  L    +  A E GR  
Sbjct: 183 EGGSALALSYIASEKVIPGYGGGMSSA--------------KAALESDCRTLAFEAGRAR 228

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL--------------EPEDAA 218
            +RVNC+S   + +         A   +G         +               E +D  
Sbjct: 229 AVRVNCISAGPLKS--------RAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVG 280

Query: 219 EAALYLGSDESKCVSGHNLVVDGGFAIV 246
            AAL+L S  ++ V+G  L VD G   +
Sbjct: 281 RAALFLLSPLARAVTGATLYVDNGLHAM 308

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 49.1 bits (117), Expect = 4e-07
 Identities = 49/330 (14%), Positives = 98/330 (29%), Gaps = 101/330 (30%)

Query: 12  GKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESV--------CKDIGSSSS 61
             +  I G     G G   A+  SK   K++           +          D+     
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 62  SASGCSYV---------------------HCDVTKEKDIENAVNTAVTQYGKLDIMFNNA 100
                  +                       ++ +   IE+  N    +YGK++++ ++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 101 GTVDEVKPNILDNDQAEFERILSI---NLVG-AFLGRNMLLGVCGIIGGAA-THAYTSSK 155
               EV+ ++L+  +  +   LS    +L+       N++         +  +  Y +S+
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP-----QSSIISLTYHASQ 176

Query: 156 ------HGLLGLMK-----NT---AVELGR-FGIRVNCVSPYAVSTPLA----KDFLKLA 196
                  G +   K     +T   A  LGR + IR+N +S   + +  A           
Sbjct: 177 KVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS-RAATAINKLNNTY 235

Query: 197 DDGLGGMYSNLKGAV----------------------------------------LEPED 216
           ++      +  +  V                                        L   D
Sbjct: 236 ENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTD 295

Query: 217 AAEAALYLGSDESKCVSGHNLVVDGGFAIV 246
               A +L S ES+ ++G  + VD G  I+
Sbjct: 296 IGSVASFLLSRESRAITGQTIYVDNGLNIM 325

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 56/323 (17%), Positives = 101/323 (31%), Gaps = 117/323 (36%)

Query: 9   RLQGKVALITGGARG-IG-ECTARLFSKHGAKVLIADIKDDLGESVCK-------DIGSS 59
             + K  LITG  +G IG E    L    GAKV++   +    + V           G+ 
Sbjct: 473 TFKDKYVLITGAGKGSIGAEVLQGLLQG-GAKVVVTTSR--FSKQVTDYYQSIYAKYGAK 529

Query: 60  SSS-----ASGCSYVHCDVTKEKDIENAV----NTAVTQYGKLD----IMFN----NAGT 102
            S+      +  S         +D+E  +    +T        D    I F         
Sbjct: 530 GSTLIVVPFNQGSK--------QDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIE 581

Query: 103 VDEVKPNILDNDQAEFE-RILSIN---LVGAFLGRNMLLGVC--------------GIIG 144
           ++ +      + ++EF  RI+  N   ++G    +    G+               G  G
Sbjct: 582 LEHI------DSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG 635

Query: 145 GAATHAYTSSKHGL----------------------------LGLMKNT-----AVELGR 171
           G     Y+ SK  L                             GLM         +E  +
Sbjct: 636 GDG--MYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIE--K 691

Query: 172 FGIR-----------VNCVSP----YAVSTPLAKDF---LKLADDGLGGMYSNLKGAVLE 213
            G+R           +  ++P        +P+  D    L+   + L    + L+  ++E
Sbjct: 692 MGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPE-LKEFTAKLRKELVE 750

Query: 214 PEDAAEAALYLGSDESKCVSGHN 236
             +  +A     + E K V+G++
Sbjct: 751 TSEVRKAVSIETALEHKVVNGNS 773

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	257
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.98
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.98
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.98
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.97
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.96
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.94
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.93
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.93
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.92
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.92
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.91
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.91
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.9
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.89
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.89
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.89
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.88
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.88
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.88
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.88
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.88
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.88
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.88
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.88
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.87
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.87
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.87
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.87
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.87
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.87
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.87
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.86
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.86
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.86
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.86
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.86
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.86
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.85
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.85
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.85
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.85
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.85
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.85
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.85
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.84
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.84
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.84
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.84
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.83
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.83
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.83
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.83
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.83
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.82
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.82
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.82
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.82
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.82
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.81
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.81
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.81
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.81
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.8
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.8
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.8
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.8
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.8
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.8
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.79
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.79
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.79
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.78
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.78
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.76
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.76
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.76
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.76
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.76
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.76
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.76
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.75
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.75
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.75
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.74
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.73
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.73
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.72
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.69
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.68
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.67
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.66
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.66
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.65
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.65
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.64
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.6
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.6
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.56
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.43
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.43
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.17
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.0
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.0
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.93
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.87
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.83
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.75
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.74
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.73
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.61
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.61
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.6
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.59
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.56
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.53
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.52
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.5
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.49
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.48
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.48
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.46
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.45
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.44
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.42
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.4
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.29
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.29
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.29
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.25
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.23
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.21
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.21
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.19
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.15
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.13
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.12
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.1
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.08
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.07
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.06
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.05
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.03
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.03
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.01
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.0
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.97
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.95
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.94
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.92
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.92
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.92
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.9
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.89
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.88
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.88
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.84
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.8
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.8
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.79
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.75
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.75
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.73
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.69
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.66
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.64
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.64
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.59
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.58
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.57
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.57
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.55
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.55
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.52
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.5
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.46
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.45
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.44
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.43
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.42
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.41
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.38
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.38
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.37
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.37
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.36
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.36
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.35
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.34
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.32
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.31
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.31
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.31
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.28
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.26
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.26
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.25
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.24
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.21
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.2
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.2
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.16
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.16
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.16
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.16
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.16
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.11
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	97.1
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.05
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.04
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.02
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.01
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	97.0
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.0
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.99
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.98
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.96
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.94
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.91
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.88
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.87
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.85
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.85
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.85
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.82
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.81
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.78
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.77
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.74
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.73
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.72
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.66
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.65
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.63
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.56
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.53
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.49
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.48
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.48
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.48
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.48
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.43
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.39
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.39
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.35
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.35
1lnq_A	336	MTHK channels, potassium channel related protein;	96.28
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.25
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.24
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.23
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	96.22
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	96.21
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.2
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.2
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.12
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.12
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.1
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.08
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.07
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.07
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.05
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.05
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.03
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.0
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	95.96
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	95.95
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.93
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.93
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	95.91
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.88
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.85
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	95.85
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.85
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	95.82
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	95.76
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.71
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	95.7
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	95.65
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.59
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	95.59
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	95.53
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	95.49
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.49
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.48

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1e-54  Score=355.48  Aligned_cols=234  Identities=32%  Similarity=0.555  Sum_probs=206.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++..+   .++.++++|++|+++++++++++.
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g---~~~~~~~~Dvt~~~~v~~~~~~~~   79 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG---KEVLGVKADVSKKKDVEEFVRRTF   79 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999987654   348999999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~  152 (257)
                      ++||+||+||||||+.... .++.+.+.|+|++++++|+.+++++.+.+               +|..+..+.+....|+
T Consensus        80 ~~~G~iDiLVNNAGi~~~~-~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~  158 (254)
T 4fn4_A           80 ETYSRIDVLCNNAGIMDGV-TPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYT  158 (254)
T ss_dssp             HHHSCCCEEEECCCCCCTT-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHH
T ss_pred             HHcCCCCEEEECCcccCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHH
Confidence            9999999999999976432 57899999999999999999999997777               3566777888889999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc--ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY--SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +||+|+.+|+|+|+.|++++|||||+|+||+++|++........+.......  ..|.+|+..|+|+|++++||+|+.++
T Consensus       159 asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~  238 (254)
T 4fn4_A          159 VAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEAS  238 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            9999999999999999999999999999999999986543322221111111  24568999999999999999999999


Q ss_pred             cccccEEEecCceee
Q 044485          231 CVSGHNLVVDGGFAI  245 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~  245 (257)
                      |+||+.+.+|||+++
T Consensus       239 ~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          239 FVNGDAVVVDGGLTV  253 (254)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CCcCCEEEeCCCccc
Confidence            999999999999876

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.6e-54  Score=354.54  Aligned_cols=233  Identities=27%  Similarity=0.354  Sum_probs=207.4

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++...+   .++..+++|++|+++++++++++
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g---~~~~~~~~Dv~~~~~v~~~~~~~   80 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG---YDAHGVAFDVTDELAIEAAFSKL   80 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT---CCEEECCCCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHH
Confidence            368999999999999999999999999999999999999999999998887654   34889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------------HhhhccccCCCCch
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------------LGVCGIIGGAATHA  150 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------------~s~~~~~~~~~~~~  150 (257)
                      .+++|+||+||||||+...  .++.+.+.|+|++.+++|+.+++++.+.+                +|..+..+.+....
T Consensus        81 ~~~~G~iDiLVNNAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~  158 (255)
T 4g81_D           81 DAEGIHVDILINNAGIQYR--KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAP  158 (255)
T ss_dssp             HHTTCCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHH
T ss_pred             HHHCCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchh
Confidence            9999999999999998765  78999999999999999999999987766                35556677788889


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      |++||+|+.+|+|+|+.|++++|||||+|+||+++|++.+................|.+|+.+|+|+|++++||+|+.++
T Consensus       159 Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~  238 (255)
T 4g81_D          159 YTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASD  238 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            99999999999999999999999999999999999999876543221111111257789999999999999999999999


Q ss_pred             cccccEEEecCcee
Q 044485          231 CVSGHNLVVDGGFA  244 (257)
Q Consensus       231 ~~~G~~~~~dgG~~  244 (257)
                      |+||+++.+|||++
T Consensus       239 ~iTG~~i~VDGG~~  252 (255)
T 4g81_D          239 YINGQIIYVDGGWL  252 (255)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             CCcCCEEEECCCeE
Confidence            99999999999975

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=1.2e-53  Score=352.33  Aligned_cols=234  Identities=28%  Similarity=0.420  Sum_probs=200.4

Q ss_pred             cccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            4 NLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         4 ~~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      +.|..+|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.      .++..+++|++|++++++++
T Consensus        21 ~~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g------~~~~~~~~Dv~~~~~v~~~~   94 (273)
T 4fgs_A           21 QSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG------GGAVGIQADSANLAELDRLY   94 (273)
T ss_dssp             ----CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTCEEEECCTTCHHHHHHHH
T ss_pred             hhhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC------CCeEEEEecCCCHHHHHHHH
Confidence            346667999999999999999999999999999999999999999999888873      23788999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-------------HhhhccccCCCCch
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-------------LGVCGIIGGAATHA  150 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-------------~s~~~~~~~~~~~~  150 (257)
                      +++.+++|+||+||||||....  .++.+.+.|+|++.+++|+.+++++.+.+             +|..+..+.+....
T Consensus        95 ~~~~~~~G~iDiLVNNAG~~~~--~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~  172 (273)
T 4fgs_A           95 EKVKAEAGRIDVLFVNAGGGSM--LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSV  172 (273)
T ss_dssp             HHHHHHHSCEEEEEECCCCCCC--CCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCC--CChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchH
Confidence            9999999999999999998755  78999999999999999999999998887             36667788888999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc----cccCcc-ccccCCCCCHHHHHHHHHHhc
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD----GLGGMY-SNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~a~~~~~l~  225 (257)
                      |++||+|+.+|+|+|+.|++++|||||+|+||+++|++........+.    ....+. ..|.+|+.+|+|+|++++||+
T Consensus       173 Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLa  252 (273)
T 4fgs_A          173 YAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLA  252 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999987655432211    111111 578899999999999999999


Q ss_pred             CCCCCcccccEEEecCceee
Q 044485          226 SDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       226 s~~~~~~~G~~~~~dgG~~~  245 (257)
                      |+.++|+||+++.+|||.+.
T Consensus       253 Sd~a~~iTG~~i~VDGG~s~  272 (273)
T 4fgs_A          253 SDDSSFVTGAELFVDGGSAQ  272 (273)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             CchhcCccCCeEeECcChhh
Confidence            99999999999999999763

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=2.2e-51  Score=337.19  Aligned_cols=236  Identities=27%  Similarity=0.405  Sum_probs=196.3

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |.++|+||++|||||++|||+++|++|+++|++|++++|+.+..+.. +++.+.+   .++.++.+|++|++++++++++
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~-~~~~~~~---~~~~~~~~Dv~~~~~v~~~v~~   76 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFL-DALAQRQ---PRATYLPVELQDDAQCRDAVAQ   76 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHH-HHHHHHC---TTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHH-HHHHhcC---CCEEEEEeecCCHHHHHHHHHH
Confidence            56789999999999999999999999999999999999998765433 3333332   2488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH--------------HhhhccccCCCCchh
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML--------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~--------------~s~~~~~~~~~~~~y  151 (257)
                      +.++||+||+||||||+..   ....+.+.|+|++.+++|+.+++++.+.+              +|..+..+.+....|
T Consensus        77 ~~~~~G~iDiLVNnAGi~~---~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y  153 (258)
T 4gkb_A           77 TIATFGRLDGLVNNAGVND---GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGY  153 (258)
T ss_dssp             HHHHHSCCCEEEECCCCCC---CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSCHHH
T ss_pred             HHHHhCCCCEEEECCCCCC---CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCchHH
Confidence            9999999999999999864   33457899999999999999999987766              355677788888999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh---ccccCcc-cccc-CCCCCHHHHHHHHHHhcC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD---DGLGGMY-SNLK-GAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~---~~~~~~~-~~~~-~~~~~~~~~a~~~~~l~s  226 (257)
                      ++||+|+.+|+|+++.|++++|||||+|+||+++|++.+.......   ....... ..|. +|+..|+|+|++++||+|
T Consensus       154 ~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS  233 (258)
T 4gkb_A          154 CASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLS  233 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999876543221   1111111 4555 489999999999999999


Q ss_pred             CCCCcccccEEEecCceeeeec
Q 044485          227 DESKCVSGHNLVVDGGFAIVNA  248 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~~~~  248 (257)
                      +.++|+||+++.+|||++-.++
T Consensus       234 ~~a~~iTG~~i~VDGG~T~l~~  255 (258)
T 4gkb_A          234 PRASHTTGEWLFVDGGYTHLDR  255 (258)
T ss_dssp             GGGTTCCSCEEEESTTTTTSCT
T ss_pred             chhcCccCCeEEECCCcchhhh
Confidence            9999999999999999875443

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=6.1e-52  Score=336.31  Aligned_cols=225  Identities=26%  Similarity=0.385  Sum_probs=194.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+  +++.+++...+   .++..+.+|++|+++++++++   
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g---~~~~~~~~Dv~d~~~v~~~~~---   76 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG---GNASALLIDFADPLAAKDSFT---   76 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT---CCEEEEECCTTSTTTTTTSST---
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC---CcEEEEEccCCCHHHHHHHHH---
Confidence            6899999999999999999999999999999999999864  35555565544   348899999999999887764   


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------------HhhhccccCCCCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------------~s~~~~~~~~~~~~y  151 (257)
                        ++++|+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+                +|..+..+.+....|
T Consensus        77 --~g~iDiLVNNAGi~~~--~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y  152 (247)
T 4hp8_A           77 --DAGFDILVNNAGIIRR--ADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSY  152 (247)
T ss_dssp             --TTCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHH
T ss_pred             --hCCCCEEEECCCCCCC--CCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHH
Confidence              4799999999998765  78999999999999999999999987765                355667778888899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++||+|+.+|+|+|+.|++++|||||+|+||+++||+.+................|.+|+..|+|+|.+++||+|+.++|
T Consensus       153 ~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~  232 (247)
T 4hp8_A          153 TAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADY  232 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999999999999999999998765433221111112578899999999999999999999999


Q ss_pred             ccccEEEecCcee
Q 044485          232 VSGHNLVVDGGFA  244 (257)
Q Consensus       232 ~~G~~~~~dgG~~  244 (257)
                      +||+++.+|||++
T Consensus       233 iTG~~i~VDGG~~  245 (247)
T 4hp8_A          233 VHGAILNVDGGWL  245 (247)
T ss_dssp             CCSCEEEESTTGG
T ss_pred             CcCCeEEECcccc
Confidence            9999999999975

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.3e-50  Score=333.87  Aligned_cols=236  Identities=20%  Similarity=0.219  Sum_probs=204.9

Q ss_pred             ccccCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGAR--GIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         7 ~~~~~~k~~lItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      |++|+||++|||||++  |||+++|++|+++|++|++++|+++.++++.+++.+.++  .++.++++|++|+++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~   78 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ--PEAHLYQIDVQSDEEVINGFE   78 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC--SSCEEEECCTTCHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--CcEEEEEccCCCHHHHHHHHH
Confidence            4689999999999875  999999999999999999999999998888888876543  248899999999999999999


Q ss_pred             HHHHHcCCccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-------------HhhhccccCCCCc
Q 044485           85 TAVTQYGKLDIMFNNAGTVDE--VKPNILDNDQAEFERILSINLVGAFLGRNML-------------LGVCGIIGGAATH  149 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-------------~s~~~~~~~~~~~  149 (257)
                      ++.+++|++|+||||||+...  ...++.+.+.++|...+++|+.+++.+.+..             +|..+..+.+...
T Consensus        79 ~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~  158 (256)
T 4fs3_A           79 QIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYN  158 (256)
T ss_dssp             HHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTH
T ss_pred             HHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccch
Confidence            999999999999999997643  1245678899999999999999999887665             3567777888899


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      .|++||+|+.+|+|+|+.|++++|||||+|+||+++|++.+....... ....+ ...|.+|+.+|+|+|++++||+|+.
T Consensus       159 ~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~-~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~  237 (256)
T 4fs3_A          159 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNT-ILKEIKERAPLKRNVDQVEVGKTAAYLLSDL  237 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHH-HHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             hhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHH-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999999999998765432211 11111 1567899999999999999999999


Q ss_pred             CCcccccEEEecCceee
Q 044485          229 SKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~  245 (257)
                      ++|+||+++.+|||++.
T Consensus       238 a~~iTG~~i~VDGG~~a  254 (256)
T 4fs3_A          238 SSGVTGENIHVDSGFHA  254 (256)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hcCccCCEEEECcCHHh
Confidence            99999999999999864

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=3.4e-51  Score=331.24  Aligned_cols=218  Identities=28%  Similarity=0.403  Sum_probs=184.4

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+.+++..         ..++..+++|++|+++++++++    +
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~----~   75 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR---------HPRIRREELDITDSQRLQRLFE----A   75 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC---------CTTEEEEECCTTCHHHHHHHHH----H
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh---------cCCeEEEEecCCCHHHHHHHHH----h
Confidence            58999999999999999999999999999999999987654321         1348899999999999888765    5


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH--------------HhhhccccCCCCchhhhhH
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML--------------LGVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~--------------~s~~~~~~~~~~~~y~~sK  155 (257)
                      +|++|+||||||+.    .++.+.+.++|++.+++|+.+++++.+.+              +|..+..+.+....|++||
T Consensus        76 ~g~iDiLVNNAGi~----~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asK  151 (242)
T 4b79_A           76 LPRLDVLVNNAGIS----RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASK  151 (242)
T ss_dssp             CSCCSEEEECCCCC----CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred             cCCCCEEEECCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHHHHH
Confidence            79999999999975    45778999999999999999999987766              3566777888889999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccccc
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGH  235 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~  235 (257)
                      +|+.+|+|+|+.|++++|||||+|+||+++||+.+......+.........|.+|+.+|+|+|++++||+|+.++|+||+
T Consensus       152 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~  231 (242)
T 4b79_A          152 GAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGA  231 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCc
Confidence            99999999999999999999999999999999976653322111111126788999999999999999999999999999


Q ss_pred             EEEecCcee
Q 044485          236 NLVVDGGFA  244 (257)
Q Consensus       236 ~~~~dgG~~  244 (257)
                      ++.+|||+.
T Consensus       232 ~l~VDGG~l  240 (242)
T 4b79_A          232 VLAVDGGYL  240 (242)
T ss_dssp             EEEESTTGG
T ss_pred             eEEECccHh
Confidence            999999975

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=1.2e-49  Score=327.77  Aligned_cols=224  Identities=25%  Similarity=0.338  Sum_probs=191.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+..      .       .+...+++|++++++++++++++.
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------~-------~~~~~~~~Dv~~~~~v~~~~~~~~   73 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------L-------PEELFVEADLTTKEGCAIVAEATR   73 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------S-------CTTTEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------C-------CcEEEEEcCCCCHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999986421      1       124678999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCC-CCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGA-ATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~-~~~~y  151 (257)
                      +++|++|+||||||+......++.+.+.|+|++.+++|+.+++++.+.++               |..+..+.+ ....|
T Consensus        74 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y  153 (261)
T 4h15_A           74 QRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAY  153 (261)
T ss_dssp             HHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHH
T ss_pred             HHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHH
Confidence            99999999999999866544678999999999999999999999977773               445556655 46789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc-----------ccC-ccccccCCCCCHHHHHH
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG-----------LGG-MYSNLKGAVLEPEDAAE  219 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~-----------~~~-~~~~~~~~~~~~~~~a~  219 (257)
                      ++||+|+.+|+|+|+.|++++|||||+|+||+++|++...........           ... ....|.+|+.+|+|+|+
T Consensus       154 ~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~  233 (261)
T 4h15_A          154 AAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVAN  233 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHH
Confidence            999999999999999999999999999999999999876543321110           011 11567899999999999


Q ss_pred             HHHHhcCCCCCcccccEEEecCcee
Q 044485          220 AALYLGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       220 ~~~~l~s~~~~~~~G~~~~~dgG~~  244 (257)
                      +++||+|+.++++||+++.+|||+.
T Consensus       234 ~v~fLaS~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          234 LIAFLASDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred             HHHHHhCchhcCccCcEEEECCcCc
Confidence            9999999999999999999999974

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.5e-49  Score=323.60  Aligned_cols=217  Identities=25%  Similarity=0.403  Sum_probs=190.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||++|||+++|++|+++|++|++++|+++.++++.++.       .++..+++|++|+++++++++++.+++|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~v~~~~~~~g   74 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER-------PNLFYFHGDVADPLTLKKFVEYAMEKLQ   74 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTC-------TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------CCEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            599999999999999999999999999999999988776665543       2378999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH--------------HhhhccccCCCCchhhhhHHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML--------------LGVCGIIGGAATHAYTSSKHG  157 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~--------------~s~~~~~~~~~~~~y~~sK~a  157 (257)
                      +||+||||||....  .++.+.+.|+|++.+++|+.+++++.+.+              +|..+..+.+....|++||+|
T Consensus        75 ~iDiLVNNAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asKaa  152 (247)
T 3ged_A           75 RIDVLVNNACRGSK--GILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGG  152 (247)
T ss_dssp             CCCEEEECCCCCCC--CGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHHHH
Confidence            99999999998765  78999999999999999999999987766              356677788888999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEE
Q 044485          158 LLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNL  237 (257)
Q Consensus       158 ~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~  237 (257)
                      +.+|+|+|+.|+++ |||||+|+||+++|++..+......      ...|.+|+.+|+|+|++++||+|+  +++||+++
T Consensus       153 l~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~~~~------~~~Pl~R~g~pediA~~v~fL~s~--~~iTG~~i  223 (247)
T 3ged_A          153 IVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQEDC------AAIPAGKVGTPKDISNMVLFLCQQ--DFITGETI  223 (247)
T ss_dssp             HHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CCHHHH------HTSTTSSCBCHHHHHHHHHHHHHC--SSCCSCEE
T ss_pred             HHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHHHHH------hcCCCCCCcCHHHHHHHHHHHHhC--CCCCCCeE
Confidence            99999999999997 9999999999999998765433211      146788999999999999999984  68999999


Q ss_pred             EecCceeee
Q 044485          238 VVDGGFAIV  246 (257)
Q Consensus       238 ~~dgG~~~~  246 (257)
                      .+|||++..
T Consensus       224 ~VDGG~s~r  232 (247)
T 3ged_A          224 IVDGGMSKR  232 (247)
T ss_dssp             EESTTGGGC
T ss_pred             EECcCHHHh
Confidence            999998754

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=1.4e-46  Score=311.49  Aligned_cols=237  Identities=20%  Similarity=0.256  Sum_probs=203.1

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      +.+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+ ..++.++.+|++|++++++++++
T Consensus         2 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   80 (265)
T 3lf2_A            2 KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFP-GARLFASVCDVLDALQVRAFAEA   80 (265)
T ss_dssp             -CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST-TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CceEEEEeCCCCCHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999988888887765221 12488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~  150 (257)
                      +.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.               |..+..+.+....
T Consensus        81 ~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  158 (265)
T 3lf2_A           81 CERTLGCASILVNNAGQGRV--STFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVA  158 (265)
T ss_dssp             HHHHHCSCSEEEECCCCCCC--BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHH
T ss_pred             HHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchh
Confidence            99999999999999998754  678899999999999999999999977763               4556667778889


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc------cccCc-c---ccccCCCCCHHHHHHH
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD------GLGGM-Y---SNLKGAVLEPEDAAEA  220 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~------~~~~~-~---~~~~~~~~~~~~~a~~  220 (257)
                      |++||+|+++|+|+++.|++++||+||+|+||+++|++..........      .+... .   ..|.+++.+|+|+|++
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  238 (265)
T 3lf2_A          159 TSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARA  238 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHH
Confidence            999999999999999999999999999999999999988765431110      00000 1   1677889999999999


Q ss_pred             HHHhcCCCCCcccccEEEecCceee
Q 044485          221 ALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       221 ~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ++||+++.+.+++|+++.+|||...
T Consensus       239 v~fL~s~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          239 ILFLASPLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             HHHHHSGGGTTCCSEEEEESSSCCC
T ss_pred             HHHHhCchhcCcCCCEEEECCCCcC
Confidence            9999999999999999999999864

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=2.4e-46  Score=310.86  Aligned_cols=235  Identities=25%  Similarity=0.355  Sum_probs=204.1

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+   .++.++.+|++|+++++++++++
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~   97 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG---HDAEAVAFDVTSESEIIEAFARL   97 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT---CCEEECCCCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999999999999988888886543   34889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+....|
T Consensus        98 ~~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y  175 (271)
T 4ibo_A           98 DEQGIDVDILVNNAGIQFR--KPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPY  175 (271)
T ss_dssp             HHHTCCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHH
T ss_pred             HHHCCCCCEEEECCCCCCC--CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhH
Confidence            9999999999999998765  67889999999999999999999986665               345566677788899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++||+|++.|+|+++.|++++||+||+|+||+++|++.+................|.+++.+|+|+|+.++||+++.+.+
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~  255 (271)
T 4ibo_A          176 TVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDY  255 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999999998765332111101111456788999999999999999999999


Q ss_pred             ccccEEEecCceeee
Q 044485          232 VSGHNLVVDGGFAIV  246 (257)
Q Consensus       232 ~~G~~~~~dgG~~~~  246 (257)
                      ++|+++.+|||..+.
T Consensus       256 itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          256 VNGQIIYVDGGMLSV  270 (271)
T ss_dssp             CCSCEEEESTTGGGB
T ss_pred             CCCcEEEECCCeecc
Confidence            999999999998653

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=5.1e-46  Score=310.56  Aligned_cols=242  Identities=25%  Similarity=0.302  Sum_probs=205.3

Q ss_pred             cccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            4 NLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         4 ~~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      ..|.+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+....++.++.+|++|++++++++
T Consensus         3 ~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~   82 (281)
T 3svt_A            3 GSMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAV   82 (281)
T ss_dssp             -----CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHH
T ss_pred             CCCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHH
Confidence            45777899999999999999999999999999999999999999999888888766544446889999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAAT  148 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~  148 (257)
                      +++.+.+|++|+||||||..... .++.+.+.++|++.+++|+.+++++.+.+.               |..+..+.+..
T Consensus        83 ~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  161 (281)
T 3svt_A           83 DAVTAWHGRLHGVVHCAGGSENI-GPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWF  161 (281)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTC
T ss_pred             HHHHHHcCCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCC
Confidence            99999999999999999974332 578899999999999999999999877653               44555677778


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      ..|++||+|+++|+|+++.|++++||+||+|+||+++|++.+................|.+++.+|+|+|++++||+++.
T Consensus       162 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~  241 (281)
T 3svt_A          162 GAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDA  241 (281)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            89999999999999999999999999999999999999998754322111111111456788999999999999999999


Q ss_pred             CCcccccEEEecCceeee
Q 044485          229 SKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~~  246 (257)
                      +.+++|+.+.+|||..+.
T Consensus       242 ~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          242 ASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             GTTCCSCEEEESTTGGGS
T ss_pred             cCCCCCCEEEeCCChhcc
Confidence            999999999999999876

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.7e-46  Score=311.10  Aligned_cols=235  Identities=27%  Similarity=0.412  Sum_probs=202.0

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+  .++.++.+|++|+++++++++++
T Consensus        15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~   92 (266)
T 4egf_A           15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG--TDVHTVAIDLAEPDAPAELARRA   92 (266)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTSTTHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999988888777754211  34899999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCch
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHA  150 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~  150 (257)
                      .+.++++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.                |..+..+.+....
T Consensus        93 ~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  170 (266)
T 4egf_A           93 AEAFGGLDVLVNNAGISHP--QPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYA  170 (266)
T ss_dssp             HHHHTSCSEEEEECCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChH
Confidence            9999999999999998765  678899999999999999999999876653                3445566777889


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.+................|.+++.+|+|+|++++||+++.+.
T Consensus       171 Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~  250 (266)
T 4egf_A          171 YCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAAS  250 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999998765432111111111145678899999999999999999999


Q ss_pred             cccccEEEecCceee
Q 044485          231 CVSGHNLVVDGGFAI  245 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~  245 (257)
                      +++|+++.+|||..+
T Consensus       251 ~itG~~i~vdGG~~~  265 (266)
T 4egf_A          251 MINGVDIPVDGGYTM  265 (266)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CccCcEEEECCCccC
Confidence            999999999999865

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.4e-46  Score=311.31  Aligned_cols=244  Identities=34%  Similarity=0.510  Sum_probs=201.3

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      +|.++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|++++++++++
T Consensus         2 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~   78 (280)
T 3tox_A            2 VMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG---GEAAALAGDVGDEALHEALVEL   78 (280)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT---CCEEECCCCTTCHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHH
Confidence            4567999999999999999999999999999999999999999988888886533   3488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhcc-ccCCCCc
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGI-IGGAATH  149 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~-~~~~~~~  149 (257)
                      +.+.++++|+||||||+.... .++.+.+.++|++.+++|+.+++++.+.+.               |..+. .+.+...
T Consensus        79 ~~~~~g~iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  157 (280)
T 3tox_A           79 AVRRFGGLDTAFNNAGALGAM-GEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVA  157 (280)
T ss_dssp             HHHHHSCCCEEEECCCCCCSC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCH
T ss_pred             HHHHcCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCch
Confidence            999999999999999976432 578899999999999999999999977663               22333 4556678


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh-hhccccCc-cccccCCCCCHHHHHHHHHHhcCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL-ADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++....... .+...... ...+.+++.+|+|+|+.++||+++
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~  237 (280)
T 3tox_A          158 PYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASD  237 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999986542211 11110001 134567889999999999999999


Q ss_pred             CCCcccccEEEecCceeeeecceeec
Q 044485          228 ESKCVSGHNLVVDGGFAIVNAGFSVF  253 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~~~~~~~~~  253 (257)
                      .+.+++|++|.+|||..+.......+
T Consensus       238 ~a~~itG~~i~vdGG~~~~~~a~~~~  263 (280)
T 3tox_A          238 GASFVTGAALLADGGASVTKAAENLY  263 (280)
T ss_dssp             GGTTCCSCEEEESTTGGGCC------
T ss_pred             cccCCcCcEEEECCCccccccccchH
Confidence            99999999999999999886655443

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1e-45  Score=306.14  Aligned_cols=238  Identities=24%  Similarity=0.301  Sum_probs=203.0

Q ss_pred             cccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            4 NLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         4 ~~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      ..|+..+++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|++++++++
T Consensus         3 ~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~   79 (264)
T 3ucx_A            3 GSMGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG---RRALSVGTDITDDAQVAHLV   79 (264)
T ss_dssp             ----CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHH
T ss_pred             CCcCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHH
Confidence            346667899999999999999999999999999999999999999888888876543   34889999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH--------------HhhhccccCCCCc
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML--------------LGVCGIIGGAATH  149 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~--------------~s~~~~~~~~~~~  149 (257)
                      +++.+.++++|+||||||..... .++.+.+.++|++.+++|+.+++++.+.+              +|..+..+.+...
T Consensus        80 ~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  158 (264)
T 3ucx_A           80 DETMKAYGRVDVVINNAFRVPSM-KPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYG  158 (264)
T ss_dssp             HHHHHHTSCCSEEEECCCSCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTTCH
T ss_pred             HHHHHHcCCCcEEEECCCCCCCC-CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCccH
Confidence            99999999999999999985332 67889999999999999999999987665              2455666777888


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh--------ccccCc-cccccCCCCCHHHHHHH
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD--------DGLGGM-YSNLKGAVLEPEDAAEA  220 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~a~~  220 (257)
                      .|++||+|+++|+|+++.|++++||+||+|+||+++|++.+.......        +..... ...|.+++.+|+|+|++
T Consensus       159 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  238 (264)
T 3ucx_A          159 AYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASA  238 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHH
Confidence            999999999999999999999999999999999999999876543211        111111 14567889999999999


Q ss_pred             HHHhcCCCCCcccccEEEecCceee
Q 044485          221 ALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       221 ~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ++||+++.+.+++|+++.+|||..+
T Consensus       239 v~~L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          239 ILFMASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHcCccccCCCCCEEEECCCccC
Confidence            9999999999999999999999864

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-45  Score=305.10  Aligned_cols=234  Identities=26%  Similarity=0.401  Sum_probs=202.2

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...++  .++.++.+|++|+++++++++++
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS--GKVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSS--SCEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC--CcEEEEEcCCCCHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999999999888888865432  24889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhcc-ccCCCCch
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGI-IGGAATHA  150 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~-~~~~~~~~  150 (257)
                      .+.++++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.               |..+. .+.+....
T Consensus        83 ~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~  160 (262)
T 3pk0_A           83 VEEFGGIDVVCANAGVFPD--APLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSH  160 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHH
T ss_pred             HHHhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChh
Confidence            9999999999999998765  678999999999999999999999877663               22333 55677789


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++..........  ......|.+++.+|+|+|++++||+++.+.
T Consensus       161 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~~r~~~p~dva~~v~~L~s~~~~  238 (262)
T 3pk0_A          161 YGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIA--SMARSIPAGALGTPEDIGHLAAFLATKEAG  238 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHH--HHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHH--HHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            999999999999999999999999999999999999987543211110  001145667899999999999999999999


Q ss_pred             cccccEEEecCceeee
Q 044485          231 CVSGHNLVVDGGFAIV  246 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~  246 (257)
                      +++|+.+.+|||..+.
T Consensus       239 ~itG~~i~vdGG~~~~  254 (262)
T 3pk0_A          239 YITGQAIAVDGGQVLP  254 (262)
T ss_dssp             TCCSCEEEESTTTTCC
T ss_pred             CCcCCEEEECCCeecC
Confidence            9999999999998875

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.4e-45  Score=303.95  Aligned_cols=233  Identities=31%  Similarity=0.439  Sum_probs=202.1

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      +.+++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|++++++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~   82 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG---GKAIGLECNVTDEQHREAVIKA   82 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHH
Confidence            4567999999999999999999999999999999999999998888888876543   3488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~  150 (257)
                      +.+.++++|+||||||....  .++ +.+.++|++.+++|+.+++++.+.+.               |..+..+.+....
T Consensus        83 ~~~~~g~id~lv~nAg~~~~--~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  159 (256)
T 3gaf_A           83 ALDQFGKITVLVNNAGGGGP--KPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMAS  159 (256)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHH
T ss_pred             HHHHcCCCCEEEECCCCCCC--CCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchH
Confidence            99999999999999998765  556 89999999999999999999977763               4556667778889


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      |++||+|+++|+++++.|++++||++|+|+||+++|++........  ....+ ...|.+++.+|+|+|+.++||+++.+
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~  237 (256)
T 3gaf_A          160 YGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPE--IERAMLKHTPLGRLGEAQDIANAALFLCSPAA  237 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHH--HHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHH--HHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcc
Confidence            9999999999999999999999999999999999999876542111  11111 14566889999999999999999999


Q ss_pred             CcccccEEEecCceeee
Q 044485          230 KCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~~  246 (257)
                      .+++|+++++|||....
T Consensus       238 ~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          238 AWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             TTCCSCEEEESTTSCCC
T ss_pred             cCccCCEEEECCCcccc
Confidence            99999999999998653

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.1e-45  Score=306.79  Aligned_cols=236  Identities=26%  Similarity=0.436  Sum_probs=202.3

Q ss_pred             ccccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHH
Q 044485            3 ANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENA   82 (257)
Q Consensus         3 ~~~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   82 (257)
                      +..|..++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+   .++..+.+|++|+++++++
T Consensus        19 p~~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~   95 (270)
T 3ftp_A           19 PGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG---LEGRGAVLNVNDATAVDAL   95 (270)
T ss_dssp             ----CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT---CCCEEEECCTTCHHHHHHH
T ss_pred             CcccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEEeCCCHHHHHHH
Confidence            3446678999999999999999999999999999999999999988888877775543   2478899999999999999


Q ss_pred             HHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCC
Q 044485           83 VNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAA  147 (257)
Q Consensus        83 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~  147 (257)
                      ++++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+.               |..+..+.+.
T Consensus        96 ~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  173 (270)
T 3ftp_A           96 VESTLKEFGALNVLVNNAGITQD--QLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPG  173 (270)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC
Confidence            99999999999999999998765  678899999999999999999999877663               4456667788


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCC
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++.+..........  ....+.+++.+|+|+|++++||+++
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~--~~~~p~~r~~~pedvA~~v~~L~s~  251 (270)
T 3ftp_A          174 QVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTAL--KTQIPLGRLGSPEDIAHAVAFLASP  251 (270)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHH--HTTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHH--HhcCCCCCCCCHHHHHHHHHHHhCC
Confidence            88999999999999999999999999999999999999998765322111111  1145667889999999999999999


Q ss_pred             CCCcccccEEEecCceee
Q 044485          228 ESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~  245 (257)
                      .+.+++|+++++|||..+
T Consensus       252 ~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          252 QAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             GGTTCCSCEEEESTTSSC
T ss_pred             CcCCccCcEEEECCCccc
Confidence            999999999999999865

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=8.5e-46  Score=303.84  Aligned_cols=228  Identities=29%  Similarity=0.497  Sum_probs=199.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..      ++..+.+|++|+++++++++++.
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dv~d~~~v~~~~~~~~   78 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD------NGKGMALNVTNPESIEAVLKAIT   78 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG------GEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc------cceEEEEeCCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999988888777743      26789999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.+|++|+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+.               |..+..+.++...|+
T Consensus        79 ~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  156 (248)
T 3op4_A           79 DEFGGVDILVNNAGITRD--NLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYA  156 (248)
T ss_dssp             HHHCCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHH
Confidence            999999999999998765  678899999999999999999999877663               445667778889999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      +||+|+++|+|+++.|++++||+||+|+||+++|++.+........  ......|.+++.+|+|+|+.++||+++.+.++
T Consensus       157 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~--~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~i  234 (248)
T 3op4_A          157 AAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRT--ATLAQVPAGRLGDPREIASAVAFLASPEAAYI  234 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHH--HHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHH--HHHhcCCCCCCcCHHHHHHHHHHHcCCccCCc
Confidence            9999999999999999999999999999999999987543221111  01114566789999999999999999999999


Q ss_pred             cccEEEecCceee
Q 044485          233 SGHNLVVDGGFAI  245 (257)
Q Consensus       233 ~G~~~~~dgG~~~  245 (257)
                      +|+++.+|||..+
T Consensus       235 tG~~i~vdgG~~~  247 (248)
T 3op4_A          235 TGETLHVNGGMYM  247 (248)
T ss_dssp             CSCEEEESTTSSC
T ss_pred             cCcEEEECCCeec
Confidence            9999999999865

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=3.3e-45  Score=305.06  Aligned_cols=237  Identities=30%  Similarity=0.397  Sum_probs=196.2

Q ss_pred             cccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-------------cchhhHhHHHHhccCCCCCCCceeEe
Q 044485            4 NLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-------------KDDLGESVCKDIGSSSSSASGCSYVH   70 (257)
Q Consensus         4 ~~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-------------~~~~~~~~~~~~~~~~~~~~~v~~~~   70 (257)
                      ..|+.++++|++|||||++|||+++|++|+++|++|++++|             +.+.+++..+++...+   .++.++.
T Consensus         3 ~~m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~   79 (277)
T 3tsc_A            3 GSMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN---RRIVAAV   79 (277)
T ss_dssp             ----CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEE
T ss_pred             CccccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC---CeEEEEE
Confidence            34677899999999999999999999999999999999998             5556666666665443   3488999


Q ss_pred             cCCCCHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------
Q 044485           71 CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------  137 (257)
Q Consensus        71 ~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------  137 (257)
                      +|++|+++++++++++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+.             
T Consensus        80 ~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv  157 (277)
T 3tsc_A           80 VDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAP--QAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSII  157 (277)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence            99999999999999999999999999999998765  678899999999999999999999877653             


Q ss_pred             ---hhhccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhh--------hhhccccCcccc
Q 044485          138 ---GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLK--------LADDGLGGMYSN  206 (257)
Q Consensus       138 ---s~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~--------~~~~~~~~~~~~  206 (257)
                         |..+..+.+....|++||+|++.|+++++.|++++||+||+|+||+++|++......        ..+.........
T Consensus       158 ~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (277)
T 3tsc_A          158 LISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPF  237 (277)
T ss_dssp             EECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCS
T ss_pred             EEccHhhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhc
Confidence               344556667788999999999999999999999999999999999999998654210        011111111222


Q ss_pred             ccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceee
Q 044485          207 LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       207 ~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ...++.+|+|+|++++||+++.+.+++|+++.+|||.++
T Consensus       238 ~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          238 LPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            223688999999999999999999999999999999864

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=2e-45  Score=307.12  Aligned_cols=235  Identities=29%  Similarity=0.392  Sum_probs=196.9

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      |+++.+|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+   .++.++++|++|+++++++++++
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~   99 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG---GQAIALEADVSDELQMRNAVRDL   99 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT---CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHH
Confidence            457889999999999999999999999999999999999999999888886543   34889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccc--cCCCCc
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGII--GGAATH  149 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~--~~~~~~  149 (257)
                      .+.+|++|+||||||+.... .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..  +.++..
T Consensus       100 ~~~~g~iD~lVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~  178 (283)
T 3v8b_A          100 VLKFGHLDIVVANAGINGVW-APIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGAT  178 (283)
T ss_dssp             HHHHSCCCEEEECCCCCCCB-CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCH
T ss_pred             HHHhCCCCEEEECCCCCCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCch
Confidence            99999999999999986432 578899999999999999999999877763               333433  556678


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc----ccC-cccccc--CCCCCHHHHHHHHH
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG----LGG-MYSNLK--GAVLEPEDAAEAAL  222 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~----~~~-~~~~~~--~~~~~~~~~a~~~~  222 (257)
                      .|++||+|+++|+|+++.|++++||+||+|+||+++|++...........    ... ....|.  +++.+|+|+|++++
T Consensus       179 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~  258 (283)
T 3v8b_A          179 AYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIR  258 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999875432111110    111 112344  78899999999999


Q ss_pred             HhcCCCCCcccccEEEecCceee
Q 044485          223 YLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       223 ~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ||+++.+.+++|+++.+|||..+
T Consensus       259 fL~s~~a~~itG~~i~vdGG~~~  281 (283)
T 3v8b_A          259 FLVSERARHVTGSPVWIDGGQGL  281 (283)
T ss_dssp             HHTSGGGTTCCSCEEEESTTHHH
T ss_pred             HHcCccccCCcCCEEEECcCccc
Confidence            99999999999999999999764

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=4.1e-45  Score=301.65  Aligned_cols=232  Identities=30%  Similarity=0.448  Sum_probs=199.1

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ||.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++.+|++|++++++++++
T Consensus         2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~   75 (259)
T 4e6p_A            2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG------PAAYAVQMDVTRQDSIDAAIAA   75 (259)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CCceEEEeeCCCHHHHHHHHHH
Confidence            5678999999999999999999999999999999999999998888888773      2378999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCc
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATH  149 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~  149 (257)
                      +.+.+|++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.                |..+..+.+...
T Consensus        76 ~~~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  153 (259)
T 4e6p_A           76 TVEHAGGLDILVNNAALFDL--APIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVA  153 (259)
T ss_dssp             HHHHSSSCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBH
T ss_pred             HHHHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCCh
Confidence            99999999999999998754  678899999999999999999999876653                344556667788


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh--------ccccCc-cccccCCCCCHHHHHHH
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD--------DGLGGM-YSNLKGAVLEPEDAAEA  220 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~a~~  220 (257)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++.........        +..... ...|.+++.+|+|+|++
T Consensus       154 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~  233 (259)
T 4e6p_A          154 IYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGM  233 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999999998765421110        000001 14567889999999999


Q ss_pred             HHHhcCCCCCcccccEEEecCceee
Q 044485          221 ALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       221 ~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ++||+++.+.+++|+++++|||..+
T Consensus       234 v~~L~s~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          234 AIFLASAESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             HHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHhCCccCCCCCCEEEECcChhc
Confidence            9999999999999999999999865

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=4.3e-45  Score=305.69  Aligned_cols=236  Identities=30%  Similarity=0.438  Sum_probs=196.4

Q ss_pred             ccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc----------------chhhHhHHHHhccCCCCCCCcee
Q 044485            5 LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK----------------DDLGESVCKDIGSSSSSASGCSY   68 (257)
Q Consensus         5 ~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~----------------~~~~~~~~~~~~~~~~~~~~v~~   68 (257)
                      .|+.++++|++|||||++|||+++|++|+++|++|++++|+                .+.+++..+++...+   .++.+
T Consensus         4 ~m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~   80 (286)
T 3uve_A            4 SMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN---RRIVT   80 (286)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT---CCEEE
T ss_pred             CCCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC---CceEE
Confidence            46778999999999999999999999999999999999887                556666666665443   35899


Q ss_pred             EecCCCCHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------
Q 044485           69 VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------  137 (257)
Q Consensus        69 ~~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------  137 (257)
                      +.+|++|+++++++++++.+.+|++|+||||||+.... .++.+.+.++|++.+++|+.+++++.+.+.           
T Consensus        81 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~  159 (286)
T 3uve_A           81 AEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGG-DTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGS  159 (286)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEE
T ss_pred             EEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCC-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcE
Confidence            99999999999999999999999999999999986541 358889999999999999999999877663           


Q ss_pred             -----hhhccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh---hhccc---------
Q 044485          138 -----GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL---ADDGL---------  200 (257)
Q Consensus       138 -----s~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~---~~~~~---------  200 (257)
                           |..+..+.+....|++||+|+++|+|+++.|++++||+||+|+||+++|++.+.....   .+...         
T Consensus       160 iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T 3uve_A          160 IILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAP  239 (286)
T ss_dssp             EEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHH
T ss_pred             EEEECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHH
Confidence                 3445566677889999999999999999999999999999999999999987532110   00000         


Q ss_pred             --cCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceee
Q 044485          201 --GGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       201 --~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                        ......| +++.+|+|+|++++||+++.+.+++|++|.+|||..+
T Consensus       240 ~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          240 ICQMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             HHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence              0111233 6789999999999999999999999999999999875

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.7e-45  Score=303.68  Aligned_cols=234  Identities=28%  Similarity=0.407  Sum_probs=199.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP---GQILTVQMDVRNTDDIQKMIEQIDE   79 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST---TCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999888886543   3488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCchhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~y~  152 (257)
                      .+|++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.                |..+..+.+....|+
T Consensus        80 ~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  157 (257)
T 3imf_A           80 KFGRIDILINNAAGNFI--CPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSA  157 (257)
T ss_dssp             HHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHH
Confidence            99999999999998654  678899999999999999999999877663                344555667788999


Q ss_pred             hhHHHHHHHHHHHHHHhc-cCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          153 SSKHGLLGLMKNTAVELG-RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~-~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +||+|+++|+|+++.|++ ++|||||+|+||+++|++........+....... ..|.+++.+|+|+|+.++||+++.+.
T Consensus       158 asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~  237 (257)
T 3imf_A          158 AAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAA  237 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence            999999999999999997 7899999999999999875433221121111111 45667899999999999999999999


Q ss_pred             cccccEEEecCceeeee
Q 044485          231 CVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~~  247 (257)
                      +++|+++.+|||..+..
T Consensus       238 ~itG~~i~vdGG~~~~~  254 (257)
T 3imf_A          238 YINGTCMTMDGGQHLHQ  254 (257)
T ss_dssp             TCCSCEEEESTTTTSCC
T ss_pred             CccCCEEEECCCcccCC
Confidence            99999999999987643

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=3.3e-45  Score=302.01  Aligned_cols=235  Identities=23%  Similarity=0.295  Sum_probs=201.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEe-eCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ++|++|||||++|||++++++|+++|++|+++ +|+.+.+++..+++...+   .++.++.+|++|+++++++++++.+.
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG---VKVLVVKANVGQPAKIKEMFQQIDET   79 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT---CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            57999999999999999999999999999886 888888888888876543   34899999999999999999999999


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhh
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSS  154 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~s  154 (257)
                      ++++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.               |..+..+.+....|++|
T Consensus        80 ~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  157 (258)
T 3oid_A           80 FGRLDVFVNNAASGVL--RPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVS  157 (258)
T ss_dssp             HSCCCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHH
Confidence            9999999999997654  678899999999999999999999977763               44566677788899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      |+|+++|+++++.|++++||+||+|+||+++|++.+................|.+++.+|+|+|++++||+++.+.+++|
T Consensus       158 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG  237 (258)
T 3oid_A          158 KAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRG  237 (258)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCS
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccC
Confidence            99999999999999999999999999999999987654322111111111456788999999999999999999999999


Q ss_pred             cEEEecCceeeeecce
Q 044485          235 HNLVVDGGFAIVNAGF  250 (257)
Q Consensus       235 ~~~~~dgG~~~~~~~~  250 (257)
                      +++.+|||..+..+..
T Consensus       238 ~~i~vdGG~~~~~~~~  253 (258)
T 3oid_A          238 QTIIVDGGRSLLVLEH  253 (258)
T ss_dssp             CEEEESTTGGGBCC--
T ss_pred             CEEEECCCccCCCCCC
Confidence            9999999998775543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=1.2e-45  Score=304.12  Aligned_cols=233  Identities=25%  Similarity=0.340  Sum_probs=198.8

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      +|.++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.      .++.++.+|++|++++++++++
T Consensus         2 ~m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~   75 (255)
T 4eso_A            2 VMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG------PRVHALRSDIADLNEIAVLGAA   75 (255)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG------GGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CcceEEEccCCCHHHHHHHHHH
Confidence            4567999999999999999999999999999999999999998888877763      2388999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchhh
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y~  152 (257)
                      +.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.             |..+..+.+....|+
T Consensus        76 ~~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  153 (255)
T 4eso_A           76 AGQTLGAIDLLHINAGVSEL--EPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYS  153 (255)
T ss_dssp             HHHHHSSEEEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHH
T ss_pred             HHHHhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHH
Confidence            99999999999999998764  678899999999999999999999988773             445566677888999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh--hhccccC--ccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL--ADDGLGG--MYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      +||+|+++|+|+++.|++++||+||+|+||+++|++.......  .......  ....|.+++.+|+|+|+.++||+++ 
T Consensus       154 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~-  232 (255)
T 4eso_A          154 ASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc-
Confidence            9999999999999999999999999999999999975421100  0000000  0135678899999999999999998 


Q ss_pred             CCcccccEEEecCceeeee
Q 044485          229 SKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~~~  247 (257)
                      +.+++|+++.+|||.....
T Consensus       233 ~~~itG~~i~vdGG~~~~l  251 (255)
T 4eso_A          233 ATFTTGAKLAVDGGLGQKL  251 (255)
T ss_dssp             CTTCCSCEEEESTTTTTTB
T ss_pred             CcCccCCEEEECCCccccC
Confidence            8899999999999987653

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.9e-45  Score=304.07  Aligned_cols=238  Identities=29%  Similarity=0.459  Sum_probs=193.9

Q ss_pred             cccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-cchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHH
Q 044485            4 NLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENA   82 (257)
Q Consensus         4 ~~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   82 (257)
                      ++++.++.+|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++....+  .++.++.+|++|+++++++
T Consensus        17 n~~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~   94 (281)
T 3v2h_A           17 NLYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS--GTVLHHPADMTKPSEIADM   94 (281)
T ss_dssp             -----CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCS--SCEEEECCCTTCHHHHHHH
T ss_pred             chhhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccC--CcEEEEeCCCCCHHHHHHH
Confidence            55677899999999999999999999999999999999999 55677777777765432  3488999999999999999


Q ss_pred             HHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCC
Q 044485           83 VNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAA  147 (257)
Q Consensus        83 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~  147 (257)
                      ++++.+.+|++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+.
T Consensus        95 ~~~~~~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  172 (281)
T 3v2h_A           95 MAMVADRFGGADILVNNAGVQFV--EKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPF  172 (281)
T ss_dssp             HHHHHHHTSSCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHCCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCC
Confidence            99999999999999999998765  67889999999999999999999987766               34556667778


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh--------ccccC-c-cccccCCCCCHHHH
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD--------DGLGG-M-YSNLKGAVLEPEDA  217 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--------~~~~~-~-~~~~~~~~~~~~~~  217 (257)
                      ...|++||+|+++|+++++.|++++||+||+|+||+++|++.........        +.... + ...|.+++.+|+|+
T Consensus       173 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edv  252 (281)
T 3v2h_A          173 KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQV  252 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHH
Confidence            88999999999999999999999999999999999999998765432111        00111 1 14567889999999


Q ss_pred             HHHHHHhcCCCCCcccccEEEecCceee
Q 044485          218 AEAALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       218 a~~~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      |++++||+++.+.+++|+++.+|||+.+
T Consensus       253 A~~v~~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          253 ASLALYLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HHHHHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred             HHHHHHHcCCCcCCCCCcEEEECCCccC
Confidence            9999999999999999999999999753

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=5.5e-45  Score=305.78  Aligned_cols=235  Identities=28%  Similarity=0.412  Sum_probs=203.7

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      +|+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+.  .++.++.+|++|++++++++++
T Consensus        35 ~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~d~~~v~~~~~~  112 (293)
T 3rih_A           35 VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA--GNVIGVRLDVSDPGSCADAART  112 (293)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS--SCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC--CcEEEEEEeCCCHHHHHHHHHH
Confidence            46689999999999999999999999999999999999999999999888876532  2488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhcc-ccCCCCc
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGI-IGGAATH  149 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~-~~~~~~~  149 (257)
                      +.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+.               |..+. .+.+...
T Consensus       113 ~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~  190 (293)
T 3rih_A          113 VVDAFGALDVVCANAGIFPE--ARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWS  190 (293)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCH
T ss_pred             HHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCH
Confidence            99999999999999998765  678899999999999999999999877662               33343 5667788


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      .|++||+|++.|+|+++.|++++||+||+|+||+++|++...........  .....|.+++.+|+|+|+.++||+++.+
T Consensus       191 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~--~~~~~p~~r~~~p~dvA~~v~fL~s~~a  268 (293)
T 3rih_A          191 HYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISG--MARSIPMGMLGSPVDIGHLAAFLATDEA  268 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHH--HHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHH--HHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999999876432211100  1114567789999999999999999999


Q ss_pred             CcccccEEEecCceeee
Q 044485          230 KCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~~  246 (257)
                      .+++|++|.+|||..+.
T Consensus       269 ~~itG~~i~vdGG~~~~  285 (293)
T 3rih_A          269 GYITGQAIVVDGGQVLP  285 (293)
T ss_dssp             TTCCSCEEEESTTTTCB
T ss_pred             cCCCCCEEEECCCccCC
Confidence            99999999999999875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.5e-45  Score=307.08  Aligned_cols=237  Identities=26%  Similarity=0.321  Sum_probs=201.2

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +..+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+  .++.++.+|++|+++++++++++
T Consensus        22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~   99 (277)
T 4fc7_A           22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG--RRCLPLSMDVRAPPAVMAAVDQA   99 (277)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHH
Confidence            4468999999999999999999999999999999999999888887777643221  34889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.               |..+..+.+....|
T Consensus       100 ~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  177 (277)
T 4fc7_A          100 LKEFGRIDILINCAAGNFL--CPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHA  177 (277)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHH
T ss_pred             HHHcCCCCEEEECCcCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHH
Confidence            9999999999999997654  678899999999999999999999877663               34455677778899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      ++||+|+++|+|+++.|++++||+||+|+||+++|++............... ...|.+++.+|+|+|++++||+++.+.
T Consensus       178 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~  257 (277)
T 4fc7_A          178 GSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLAS  257 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccC
Confidence            9999999999999999999999999999999999986543321111111111 145678899999999999999999999


Q ss_pred             cccccEEEecCceeeee
Q 044485          231 CVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~~  247 (257)
                      +++|+++.+|||..+.-
T Consensus       258 ~itG~~i~vdGG~~~~~  274 (277)
T 4fc7_A          258 YVTGAVLVADGGAWLTF  274 (277)
T ss_dssp             TCCSCEEEESTTHHHHC
T ss_pred             CcCCCEEEECCCcccCC
Confidence            99999999999987653

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=4.4e-45  Score=299.45  Aligned_cols=228  Identities=27%  Similarity=0.428  Sum_probs=197.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.      .++.++.+|++|+++++++++++.
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~   75 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG------KKARAIAADISDPGSVKALFAEIQ   75 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC------TTEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CceEEEEcCCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999998888877772      248899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~y  151 (257)
                      +.+|++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.                |..+..+.+....|
T Consensus        76 ~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  153 (247)
T 3rwb_A           76 ALTGGIDILVNNASIVPF--VAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAY  153 (247)
T ss_dssp             HHHSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHH
T ss_pred             HHCCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhh
Confidence            999999999999998754  678899999999999999999999977653                33445567778899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.+........... ....+.+++.+|+|+|+.++||+++.+.+
T Consensus       154 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~r~~~pedva~~v~~L~s~~~~~  232 (247)
T 3rwb_A          154 VAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFV-EMLQAMKGKGQPEHIADVVSFLASDDARW  232 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHH-HHHSSSCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHH-hcccccCCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999999987653221110000 00145678899999999999999999999


Q ss_pred             ccccEEEecCcee
Q 044485          232 VSGHNLVVDGGFA  244 (257)
Q Consensus       232 ~~G~~~~~dgG~~  244 (257)
                      ++|+++.+|||..
T Consensus       233 itG~~i~vdGG~~  245 (247)
T 3rwb_A          233 ITGQTLNVDAGMV  245 (247)
T ss_dssp             CCSCEEEESTTSS
T ss_pred             CCCCEEEECCCcc
Confidence            9999999999975

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=6e-45  Score=303.33  Aligned_cols=231  Identities=34%  Similarity=0.571  Sum_probs=198.3

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++.+|++|+++++++++++
T Consensus        24 ~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~   97 (277)
T 3gvc_A           24 HPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG------CGAAACRVDVSDEQQIIAMVDAC   97 (277)
T ss_dssp             ---CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC------SSCEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC------CcceEEEecCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999988888887772      24889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.+.+.+               +|..+..+.+....|
T Consensus        98 ~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y  175 (277)
T 3gvc_A           98 VAAFGGVDKLVANAGVVHL--ASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAY  175 (277)
T ss_dssp             HHHHSSCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHH
T ss_pred             HHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhH
Confidence            9999999999999998755  67889999999999999999999987766               345566677778899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccc-cC----ccccccCCCCCHHHHHHHHHHhcC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGL-GG----MYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ++||+|++.|+|+++.|++++||+||+|+||+++|++.+.......... ..    ....+.+++.+|+|+|++++||++
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s  255 (277)
T 3gvc_A          176 GMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLS  255 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999999776433211111 11    113456789999999999999999


Q ss_pred             CCCCcccccEEEecCceee
Q 044485          227 DESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~  245 (257)
                      +.+.+++|+++.+|||...
T Consensus       256 ~~a~~itG~~i~vdGG~~~  274 (277)
T 3gvc_A          256 DDASMITGTTQIADGGTIA  274 (277)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             CccCCccCcEEEECCcchh
Confidence            9999999999999999764

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=1.1e-44  Score=304.98  Aligned_cols=238  Identities=32%  Similarity=0.473  Sum_probs=197.6

Q ss_pred             ccccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc------------chhhHhHHHHhccCCCCCCCceeEe
Q 044485            3 ANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK------------DDLGESVCKDIGSSSSSASGCSYVH   70 (257)
Q Consensus         3 ~~~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~~~~~~~~v~~~~   70 (257)
                      +..|+.++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+   .++.++.
T Consensus        19 p~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~   95 (299)
T 3t7c_A           19 PGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG---RRIIASQ   95 (299)
T ss_dssp             ---CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEE
T ss_pred             CcccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC---CceEEEE
Confidence            3457778999999999999999999999999999999999987            556666666665543   3489999


Q ss_pred             cCCCCHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------
Q 044485           71 CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------  137 (257)
Q Consensus        71 ~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------  137 (257)
                      +|++|+++++++++++.+.+|++|+||||||+.... .++.+.+.++|++.+++|+.+++.+.+.+.             
T Consensus        96 ~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv  174 (299)
T 3t7c_A           96 VDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEG-TRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIV  174 (299)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC-CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence            999999999999999999999999999999987542 348899999999999999999999877663             


Q ss_pred             ---hhhccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh---hccccC---------
Q 044485          138 ---GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA---DDGLGG---------  202 (257)
Q Consensus       138 ---s~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~---~~~~~~---------  202 (257)
                         |..+..+.+....|++||+|+++|+|+++.|++++||+||+|+||+++|++........   ......         
T Consensus       175 ~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (299)
T 3t7c_A          175 FTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVAS  254 (299)
T ss_dssp             EECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHH
T ss_pred             EECChhhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHh
Confidence               44555667778899999999999999999999999999999999999999875321110   000000         


Q ss_pred             -cc-ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceee
Q 044485          203 -MY-SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       203 -~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                       .. ..+ +++.+|+|+|++++||+++.+.+++|+++.+|||..+
T Consensus       255 ~~~~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          255 RQMHVLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             HHHSSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhcccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence             11 223 6788999999999999999999999999999999875

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=1.2e-44  Score=301.52  Aligned_cols=231  Identities=32%  Similarity=0.451  Sum_probs=198.6

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|+++++++++++
T Consensus        27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~d~~~v~~~~~~~  103 (276)
T 3r1i_A           27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG---GKALPIRCDVTQPDQVRGMLDQM  103 (276)
T ss_dssp             GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT---CCCEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999999988888886543   34889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhccccC--CCC
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIGG--AAT  148 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~~--~~~  148 (257)
                      .+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+..                ..+..+.  +..
T Consensus       104 ~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~  181 (276)
T 3r1i_A          104 TGELGGIDIAVCNAGIVSV--QAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQV  181 (276)
T ss_dssp             HHHHSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCC
T ss_pred             HHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCc
Confidence            9999999999999998765  6788999999999999999999998776632                2222222  245


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      ..|++||+|++.|+|+++.|++++||+||+|+||+++|++.+.........   ....|.+++.+|+|+|++++||+++.
T Consensus       182 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~---~~~~p~~r~~~pedvA~~v~fL~s~~  258 (276)
T 3r1i_A          182 SHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALW---EPKIPLGRMGRPEELTGLYLYLASAA  258 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHH---GGGSTTSSCBCGGGSHHHHHHHHSGG
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHH---HhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            689999999999999999999999999999999999999876542211111   11456688999999999999999999


Q ss_pred             CCcccccEEEecCceee
Q 044485          229 SKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~  245 (257)
                      +.+++|+++.+|||.+.
T Consensus       259 ~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          259 SSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             GTTCCSCEEEESTTTTC
T ss_pred             ccCccCcEEEECcCccC
Confidence            99999999999999754

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=5.1e-45  Score=302.12  Aligned_cols=229  Identities=27%  Similarity=0.475  Sum_probs=190.4

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++.+|++|+++++++++++
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~   95 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG------KDVFVFSANLSDRKSIKQLAEVA   95 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------SSEEEEECCTTSHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CceEEEEeecCCHHHHHHHHHHH
Confidence            568999999999999999999999999999999999999988888777663      24889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|
T Consensus        96 ~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y  173 (266)
T 3grp_A           96 EREMEGIDILVNNAGITRD--GLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNY  173 (266)
T ss_dssp             HHHHTSCCEEEECCCCC-------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHH
T ss_pred             HHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhH
Confidence            9999999999999998765  678899999999999999999999877663               33455566677899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++||+|+++|+|+++.|++++||+||+|+||+++|++.+..........  ....|.+++..|+|+|++++||+++.+.+
T Consensus       174 ~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~--~~~~p~~r~~~~edvA~~v~~L~s~~~~~  251 (266)
T 3grp_A          174 CAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAI--MAMIPMKRMGIGEEIAFATVYLASDEAAY  251 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHH--HTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHH--HhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            9999999999999999999999999999999999998765322111111  11456788999999999999999999999


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      ++|+++.+|||+.+
T Consensus       252 itG~~i~vdGG~~~  265 (266)
T 3grp_A          252 LTGQTLHINGGMAM  265 (266)
T ss_dssp             CCSCEEEESTTC--
T ss_pred             ccCCEEEECCCeee
Confidence            99999999999875

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=1e-44  Score=302.33  Aligned_cols=231  Identities=28%  Similarity=0.394  Sum_probs=198.1

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +.+|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+   .++.++.+|++|+++++++++++.+.
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG---HDVDGSSCDVTSTDEVHAAVAAAVER   98 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT---CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999888888886543   34889999999999999999999999


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------------hhhccccCCCCchhh
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------------s~~~~~~~~~~~~y~  152 (257)
                      +|++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.                 |..+..+.+....|+
T Consensus        99 ~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~  176 (279)
T 3sju_A           99 FGPIGILVNSAGRNGG--GETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYT  176 (279)
T ss_dssp             HCSCCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             cCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHH
Confidence            9999999999998765  678899999999999999999999877653                 344556677788999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh--------ccccCcc-ccccCCCCCHHHHHHHHHH
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD--------DGLGGMY-SNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~~a~~~~~  223 (257)
                      +||+|+++|+|+++.|++++||+||+|+||+++|++.+.......        +....+. ..|.+++.+|+|+|++++|
T Consensus       177 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~  256 (279)
T 3sju_A          177 ASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGY  256 (279)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999876533111        1111111 4566889999999999999


Q ss_pred             hcCCCCCcccccEEEecCceee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      |+++.+.+++|+++.+|||.+.
T Consensus       257 L~s~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          257 LVTDAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             HTSSGGGGCCSCEEEESTTCCC
T ss_pred             HhCccccCcCCcEEEECCCccC
Confidence            9999999999999999999864

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=6.2e-45  Score=302.13  Aligned_cols=231  Identities=27%  Similarity=0.474  Sum_probs=198.4

Q ss_pred             ccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-cchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            5 LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         5 ~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      ++.+++++|++|||||++|||+++|++|+++|++|++++| +.+.++++.+++...+   .++.++.+|++|++++++++
T Consensus        21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~   97 (269)
T 4dmm_A           21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG---GEAFAVKADVSQESEVEALF   97 (269)
T ss_dssp             ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHH
Confidence            3346789999999999999999999999999999999988 5566677777765543   34889999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAAT  148 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~  148 (257)
                      +++.+.+|++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+..
T Consensus        98 ~~~~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  175 (269)
T 4dmm_A           98 AAVIERWGRLDVLVNNAGITRD--TLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQ  175 (269)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTC
T ss_pred             HHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCc
Confidence            9999999999999999998765  67889999999999999999999987765               244566677888


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCC-
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD-  227 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~-  227 (257)
                      ..|++||+|+++|+++++.|++++||++|+|+||+++|++........     .....|.+++.+|+|+|++++||+++ 
T Consensus       176 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-----~~~~~p~~r~~~~~dvA~~v~~l~s~~  250 (269)
T 4dmm_A          176 ANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEK-----LLEVIPLGRYGEAAEVAGVVRFLAADP  250 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHH-----HGGGCTTSSCBCHHHHHHHHHHHHHCG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHH-----HHhcCCCCCCCCHHHHHHHHHHHhCCc
Confidence            899999999999999999999999999999999999999876543210     11145667899999999999999998 


Q ss_pred             CCCcccccEEEecCceee
Q 044485          228 ESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~  245 (257)
                      .+.+++|+++.+|||..+
T Consensus       251 ~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          251 AAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             GGGGCCSCEEEESTTSCC
T ss_pred             ccCCCcCCEEEECCCeec
Confidence            788999999999999875

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-44  Score=300.93  Aligned_cols=236  Identities=25%  Similarity=0.431  Sum_probs=196.3

Q ss_pred             ccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-------------cchhhHhHHHHhccCCCCCCCceeEec
Q 044485            5 LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-------------KDDLGESVCKDIGSSSSSASGCSYVHC   71 (257)
Q Consensus         5 ~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-------------~~~~~~~~~~~~~~~~~~~~~v~~~~~   71 (257)
                      .+|.++++|++|||||++|||+++|++|+++|++|++++|             +.+.++++.+++...+   .++.++.+
T Consensus         8 ~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~   84 (280)
T 3pgx_A            8 GQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG---RKALTRVL   84 (280)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT---CCEEEEEC
T ss_pred             ccccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC---CeEEEEEc
Confidence            3566899999999999999999999999999999999998             5667777777776543   34889999


Q ss_pred             CCCCHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------
Q 044485           72 DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------  137 (257)
Q Consensus        72 D~~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------  137 (257)
                      |++|+++++++++++.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.              
T Consensus        85 Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~  162 (280)
T 3pgx_A           85 DVRDDAALRELVADGMEQFGRLDVVVANAGVLSW--GRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVV  162 (280)
T ss_dssp             CTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence            9999999999999999999999999999998765  678899999999999999999999877663              


Q ss_pred             --hhhccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHh-----hhhhccccC--cccccc
Q 044485          138 --GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFL-----KLADDGLGG--MYSNLK  208 (257)
Q Consensus       138 --s~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~-----~~~~~~~~~--~~~~~~  208 (257)
                        |..+..+.+....|++||+|+++|+|+++.|++++||+||+|+||+++|++.....     ...+.....  ......
T Consensus       163 isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (280)
T 3pgx_A          163 VSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQP  242 (280)
T ss_dssp             ECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBC
T ss_pred             EcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCC
Confidence              34455666778899999999999999999999999999999999999999865421     111111111  111222


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceee
Q 044485          209 GAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       209 ~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      .++.+|+|+|+.++||+++.+.+++|+++.+|||...
T Consensus       243 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          243 NGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            3688999999999999999999999999999999753

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.7e-44  Score=300.72  Aligned_cols=232  Identities=34%  Similarity=0.518  Sum_probs=200.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++.+|++|+++++++++++.
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~   96 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG------SKAFGVRVDVSSAKDAESMVEKTT   96 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC------TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CceEEEEecCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999988888877752      248899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.+|++|+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+.               |..+..+.+....|+
T Consensus        97 ~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  174 (277)
T 4dqx_A           97 AKWGRVDVLVNNAGFGTT--GNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYV  174 (277)
T ss_dssp             HHHSCCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             HHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHH
Confidence            999999999999998755  678899999999999999999999877763               445556677788999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcccc----CccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG----GMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.............    .....+.+++.+|+|+|+.++||+++.
T Consensus       175 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~  254 (277)
T 4dqx_A          175 ASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDR  254 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCc
Confidence            9999999999999999999999999999999999985443321111000    011456678899999999999999999


Q ss_pred             CCcccccEEEecCceeeee
Q 044485          229 SKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~~~  247 (257)
                      +.+++|+++.+|||..+..
T Consensus       255 ~~~itG~~i~vdGG~~~~~  273 (277)
T 4dqx_A          255 SRFATGSILTVDGGSSIGN  273 (277)
T ss_dssp             GTTCCSCEEEESSSSSSCC
T ss_pred             cCCCcCCEEEECCchhhhh
Confidence            9999999999999988764

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=1e-44  Score=300.96  Aligned_cols=235  Identities=27%  Similarity=0.360  Sum_probs=197.8

Q ss_pred             cccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc-chhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHH
Q 044485            4 NLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENA   82 (257)
Q Consensus         4 ~~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   82 (257)
                      .+|+.++++|++|||||++|||+++|++|+++|++|++++++ .+.++++.+++...+   .++.++.+|++|+++++++
T Consensus        10 ~~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~   86 (270)
T 3is3_A           10 TYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG---SDAIAIKADIRQVPEIVKL   86 (270)
T ss_dssp             -CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHH
T ss_pred             ccCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHH
Confidence            456678999999999999999999999999999999998765 556677777776543   3488999999999999999


Q ss_pred             HHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hh-ccccCCCC
Q 044485           83 VNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VC-GIIGGAAT  148 (257)
Q Consensus        83 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~-~~~~~~~~  148 (257)
                      ++++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+..             .. +..+.+..
T Consensus        87 ~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  164 (270)
T 3is3_A           87 FDQAVAHFGHLDIAVSNSGVVSF--GHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKH  164 (270)
T ss_dssp             HHHHHHHHSCCCEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCC
Confidence            99999999999999999998754  6788999999999999999999999877743             22 33455677


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh---------hccccCc-cccccCCCCCHHHHH
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA---------DDGLGGM-YSNLKGAVLEPEDAA  218 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~a  218 (257)
                      ..|++||+|+++|+|+++.|++++||+||+|+||+++|++........         +...... ...|.+++.+|+|+|
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA  244 (270)
T 3is3_A          165 SLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVA  244 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHH
Confidence            889999999999999999999999999999999999999976432110         0000001 145678899999999


Q ss_pred             HHHHHhcCCCCCcccccEEEecCce
Q 044485          219 EAALYLGSDESKCVSGHNLVVDGGF  243 (257)
Q Consensus       219 ~~~~~l~s~~~~~~~G~~~~~dgG~  243 (257)
                      ++++||+++.+.+++|+++.+|||.
T Consensus       245 ~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          245 NVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHcCCccCCccCcEEEeCCCC
Confidence            9999999999999999999999996

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=5.6e-45  Score=303.27  Aligned_cols=232  Identities=22%  Similarity=0.300  Sum_probs=199.3

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |++++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+   .++.++.+|++|++++++++++
T Consensus        27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~  103 (275)
T 4imr_A           27 TIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG---GTAQELAGDLSEAGAGTDLIER  103 (275)
T ss_dssp             HHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT---CCEEEEECCTTSTTHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHH
Confidence            4567999999999999999999999999999999999999998888888876543   3488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~  150 (257)
                      +.+. +++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....
T Consensus       104 ~~~~-g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~  180 (275)
T 4imr_A          104 AEAI-APVDILVINASAQIN--ATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTA  180 (275)
T ss_dssp             HHHH-SCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHH
T ss_pred             HHHh-CCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchh
Confidence            9887 899999999998765  678899999999999999999999877763               3344455566667


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-cc-ccCCCCCHHHHHHHHHHhcCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SN-LKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      |++||+|+++|+|+++.|++++||+||+|+||+++|++........++...... .. +.+++.+|+|+|++++||+++.
T Consensus       181 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~  260 (275)
T 4imr_A          181 YAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEA  260 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999999999987665432222222222 22 6788999999999999999999


Q ss_pred             CCcccccEEEecCce
Q 044485          229 SKCVSGHNLVVDGGF  243 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~  243 (257)
                      +++++|+++.+|||+
T Consensus       261 a~~itG~~i~vdGG~  275 (275)
T 4imr_A          261 CSFMTGETIFLTGGY  275 (275)
T ss_dssp             GTTCCSCEEEESSCC
T ss_pred             cCCCCCCEEEeCCCC
Confidence            999999999999995

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.6e-45  Score=303.28  Aligned_cols=238  Identities=24%  Similarity=0.361  Sum_probs=183.9

Q ss_pred             ccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-cchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            5 LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         5 ~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      .||.++.+|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++...+   .++.++++|++|++++++++
T Consensus        22 ~mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~   98 (280)
T 4da9_A           22 SMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG---ARVIFLRADLADLSSHQATV   98 (280)
T ss_dssp             -CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT---CCEEEEECCTTSGGGHHHHH
T ss_pred             hhhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHH
Confidence            3667889999999999999999999999999999999996 6667777777776543   34899999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh------------------hhccccC
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG------------------VCGIIGG  145 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s------------------~~~~~~~  145 (257)
                      +++.+.++++|+||||||.......++.+.+.++|++.+++|+.+++++.+.+..                  ..+..+.
T Consensus        99 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~  178 (280)
T 4da9_A           99 DAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS  178 (280)
T ss_dssp             HHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------
T ss_pred             HHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC
Confidence            9999999999999999998433336788999999999999999999998776643                  2344455


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhc
Q 044485          146 AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       146 ~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  225 (257)
                      +....|++||+|++.|+++++.|++++||+||+|+||+++|++.............. ...|.+++.+|+|+|++++||+
T Consensus       179 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~p~~r~~~pedvA~~v~~L~  257 (280)
T 4da9_A          179 PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIES-GLVPMRRWGEPEDIGNIVAGLA  257 (280)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------CCBCHHHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhh-cCCCcCCcCCHHHHHHHHHHHh
Confidence            667789999999999999999999999999999999999999876543221111110 1356678999999999999999


Q ss_pred             CCCCCcccccEEEecCceeee
Q 044485          226 SDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       226 s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ++.+.+++|+++.+|||..+.
T Consensus       258 s~~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          258 GGQFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             TSTTGGGTTCEEEESTTCC--
T ss_pred             CccccCCCCCEEEECCCcccC
Confidence            999999999999999998764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-44  Score=299.62  Aligned_cols=239  Identities=26%  Similarity=0.399  Sum_probs=199.1

Q ss_pred             ccccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHH
Q 044485            3 ANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENA   82 (257)
Q Consensus         3 ~~~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   82 (257)
                      +..|+.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++.+|++|+++++++
T Consensus         2 p~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~   75 (271)
T 3tzq_B            2 PGSMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG------RGAVHHVVDLTNEVSVRAL   75 (271)
T ss_dssp             -----CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHC------TTCEEEECCTTCHHHHHHH
T ss_pred             CCCCCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC------CCeEEEECCCCCHHHHHHH
Confidence            3457778999999999999999999999999999999999999998888887772      2378999999999999999


Q ss_pred             HHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCC
Q 044485           83 VNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAA  147 (257)
Q Consensus        83 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~  147 (257)
                      ++++.+.++++|+||||||.......++.+.+.++|++.+++|+.+++++.+.+.               |..+..+.+.
T Consensus        76 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  155 (271)
T 3tzq_B           76 IDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDM  155 (271)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSS
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCC
Confidence            9999999999999999999874433668899999999999999999999977762               4455666777


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcC
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ...|++||+|+++|+++++.|++++||+||+|+||+++|++.+.....  .....+ ...+.+++.+|+|+|+.++||++
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s  233 (271)
T 3tzq_B          156 STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQ--PIVDIFATHHLAGRIGEPHEIAELVCFLAS  233 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CH--HHHHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            889999999999999999999999999999999999999986522111  000111 14566788999999999999999


Q ss_pred             CCCCcccccEEEecCceeeeecc
Q 044485          227 DESKCVSGHNLVVDGGFAIVNAG  249 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~~~~~  249 (257)
                      +.+.+++|+++.+|||.....+.
T Consensus       234 ~~~~~itG~~i~vdGG~~~~~~~  256 (271)
T 3tzq_B          234 DRAAFITGQVIAADSGLLAHLPG  256 (271)
T ss_dssp             GGGTTCCSCEEEESTTTTTBCTT
T ss_pred             cccCCcCCCEEEECCCccccCCC
Confidence            99999999999999994333333

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=2.3e-44  Score=300.49  Aligned_cols=235  Identities=29%  Similarity=0.435  Sum_probs=196.0

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc------------chhhHhHHHHhccCCCCCCCceeEecCCC
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK------------DDLGESVCKDIGSSSSSASGCSYVHCDVT   74 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~   74 (257)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+   .++.++.+|++
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~   81 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG---RRCISAKVDVK   81 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC---CeEEEEeCCCC
Confidence            457899999999999999999999999999999999997            445556655555433   34889999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------Hhh
Q 044485           75 KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGV  139 (257)
Q Consensus        75 ~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~  139 (257)
                      |+++++++++++.+.+|++|+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+               +|.
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~  159 (281)
T 3s55_A           82 DRAALESFVAEAEDTLGGIDIAITNAGISTI--ALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSM  159 (281)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCEEEECCCCCCC--CCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCh
Confidence            9999999999999999999999999998765  67899999999999999999999997765               345


Q ss_pred             hccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh---hh----ccc---cC---cccc
Q 044485          140 CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL---AD----DGL---GG---MYSN  206 (257)
Q Consensus       140 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~---~~----~~~---~~---~~~~  206 (257)
                      .+..+.+....|++||+|+++|+|+++.|++++||+||+|+||+++|++.+.....   .+    ...   ..   ....
T Consensus       160 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (281)
T 3s55_A          160 LGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHL  239 (281)
T ss_dssp             GGGSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCS
T ss_pred             hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhc
Confidence            56667778889999999999999999999999999999999999999987532110   00    000   00   0112


Q ss_pred             ccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          207 LKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       207 ~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ..+++.+|+|+|++++||+++.+.+++|+.+++|||..+.
T Consensus       240 ~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          240 QYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             cCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            2267899999999999999999999999999999998753

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=4.7e-44  Score=295.31  Aligned_cols=235  Identities=25%  Similarity=0.403  Sum_probs=188.6

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEe-eCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ++++++|++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++...+   .++.++.+|++|++++++++++
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~   79 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG---RSALAIKADLTNAAEVEAAISA   79 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT---SCCEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999988 566667777777776543   3488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhcc-ccCCCCchh
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGI-IGGAATHAY  151 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~-~~~~~~~~y  151 (257)
                      +.+.+|++|+||||||..... .++.+.+.++|++.+++|+.+++++.+.+.             |..+. .+.+....|
T Consensus        80 ~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y  158 (259)
T 3edm_A           80 AADKFGEIHGLVHVAGGLIAR-KTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAY  158 (259)
T ss_dssp             HHHHHCSEEEEEECCCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHH
T ss_pred             HHHHhCCCCEEEECCCccCCC-CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHH
Confidence            999999999999999976322 678899999999999999999999988774             33344 456777899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      ++||+|+++|+|+++.|++++ |+||+|+||+++|++......  ++...... ..|.+++.+|+|+|+.++||+++.+.
T Consensus       159 ~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~  235 (259)
T 3edm_A          159 ATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTK--PEVRERVAGATSLKREGSSEDVAGLVAFLASDDAA  235 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC------------------------CCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccC--hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            999999999999999999987 999999999999998765432  11111111 45667899999999999999999999


Q ss_pred             cccccEEEecCceeeeec
Q 044485          231 CVSGHNLVVDGGFAIVNA  248 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~~~  248 (257)
                      +++|+++.+|||.....+
T Consensus       236 ~itG~~i~vdGg~~~~~~  253 (259)
T 3edm_A          236 YVTGACYDINGGVLFSEG  253 (259)
T ss_dssp             TCCSCEEEESBCSSBC--
T ss_pred             CccCCEEEECCCcCCCCC
Confidence            999999999999887654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=4.3e-44  Score=293.34  Aligned_cols=229  Identities=25%  Similarity=0.441  Sum_probs=195.9

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc-chhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +.+|++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++...+   .++.++++|++|+++++++++++.+
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~   78 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG---VDSFAIQANVADADEVKAMIKEVVS   78 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            357999999999999999999999999999998874 466777777776543   3488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~~  153 (257)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+....|++
T Consensus        79 ~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  156 (246)
T 3osu_A           79 QFGSLDVLVNNAGITRD--NLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVA  156 (246)
T ss_dssp             HHSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHH
Confidence            99999999999998765  67889999999999999999999987766               24456667788889999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      ||+|+++|+|+++.|++++||++|+|+||+++|++.+.........  .....|.+++.+|+|+|++++||+++.+.+++
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~--~~~~~p~~r~~~~~dva~~v~~l~s~~~~~it  234 (246)
T 3osu_A          157 TKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQ--MLTQIPLARFGQDTDIANTVAFLASDKAKYIT  234 (246)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHH--HHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHH--HHhcCCCCCCcCHHHHHHHHHHHhCccccCCC
Confidence            9999999999999999999999999999999999865432211110  01145677899999999999999999999999


Q ss_pred             ccEEEecCceee
Q 044485          234 GHNLVVDGGFAI  245 (257)
Q Consensus       234 G~~~~~dgG~~~  245 (257)
                      |+++++|||+.+
T Consensus       235 G~~i~vdgG~~~  246 (246)
T 3osu_A          235 GQTIHVNGGMYM  246 (246)
T ss_dssp             SCEEEESTTSCC
T ss_pred             CCEEEeCCCccC
Confidence            999999999763

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=6.4e-44  Score=299.65  Aligned_cols=235  Identities=25%  Similarity=0.297  Sum_probs=197.0

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc--hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD--DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.  +..+++.+++...+   .++.++.+|++|+++++++++
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~  120 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG---RKAVLLPGDLSDESFARSLVH  120 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT---CCEEECCCCTTSHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC---CcEEEEEecCCCHHHHHHHHH
Confidence            3468999999999999999999999999999999999873  34555555554433   348899999999999999999


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchh
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAY  151 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y  151 (257)
                      ++.+.++++|+||||||..... .++.+.+.++|++.+++|+.+++++.+.+.             |..+..+.+....|
T Consensus       121 ~~~~~~g~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y  199 (294)
T 3r3s_A          121 KAREALGGLDILALVAGKQTAI-PEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDY  199 (294)
T ss_dssp             HHHHHHTCCCEEEECCCCCCCC-SSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHHHcCCCCEEEECCCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHH
Confidence            9999999999999999986432 568899999999999999999999988773             44555667778899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++||+|+++|+|+++.|++++||+||+|+||+++|++..................+.+++.+|+|+|++++||+++.+.+
T Consensus       200 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~  279 (294)
T 3r3s_A          200 AATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSY  279 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999999985432111111111112566788999999999999999999999


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      ++|+++.+|||..+
T Consensus       280 itG~~i~vdGG~~l  293 (294)
T 3r3s_A          280 VTAEVHGVCGGEHL  293 (294)
T ss_dssp             CCSCEEEESTTCCC
T ss_pred             CCCCEEEECCCccC
Confidence            99999999999875

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=9.7e-45  Score=299.86  Aligned_cols=235  Identities=19%  Similarity=0.295  Sum_probs=190.2

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc---chhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK---DDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~---~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      ++++++|++|||||++|||+++|++|+++|++|++++|.   .+.++++.+++...+   .++.++.+|++|++++++++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~   82 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG---AKVALYQSDLSNEEEVAKLF   82 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT---CEEEEEECCCCSHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHH
Confidence            357899999999999999999999999999999998765   345666677765543   35889999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhccccCCCCch
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCGIIGGAATHA  150 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~~~~~~~~~  150 (257)
                      +++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.+.+.+..             ..+..+.+....
T Consensus        83 ~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~  160 (262)
T 3ksu_A           83 DFAEKEFGKVDIAINTVGKVLK--KPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYST  160 (262)
T ss_dssp             HHHHHHHCSEEEEEECCCCCCS--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCch
Confidence            9999999999999999998765  6788999999999999999999999888743             334445567789


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      |++||+|+++|+|+++.|++++||+||+|+||+++|++.......  ...... ...+.+++.+|+|+|+.++||+++ +
T Consensus       161 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~  237 (262)
T 3ksu_A          161 YAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETK--ESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD-G  237 (262)
T ss_dssp             -----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC--------------CCCCSCCGGGTHHHHHHHHTT-T
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCch--HHHHHHHhcCcccCCCCHHHHHHHHHHHcCC-C
Confidence            999999999999999999999999999999999999987543211  111111 145667889999999999999999 8


Q ss_pred             CcccccEEEecCceeeeecc
Q 044485          230 KCVSGHNLVVDGGFAIVNAG  249 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~~~~~  249 (257)
                      .+++|+.+.+|||.......
T Consensus       238 ~~itG~~i~vdGg~~~~~~~  257 (262)
T 3ksu_A          238 WWINGQTIFANGGYTTREGH  257 (262)
T ss_dssp             TTCCSCEEEESTTCCCC---
T ss_pred             CCccCCEEEECCCccCCCcc
Confidence            99999999999998876443

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=7.7e-44  Score=294.18  Aligned_cols=234  Identities=35%  Similarity=0.506  Sum_probs=187.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.      .++.++.+|++|.++++++++++.
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~   78 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG------DAALAVAADISKEADVDAAVEAAL   78 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC------CceEEEEecCCCHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999999999888888773      248899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------------hhhccccCCCC
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------------GVCGIIGGAAT  148 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------------s~~~~~~~~~~  148 (257)
                      +.++++|+||||||.... ..++.+.+.++|++.+++|+.+++.+.+.+.                   |..+..+.+..
T Consensus        79 ~~~g~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  157 (261)
T 3n74_A           79 SKFGKVDILVNNAGIGHK-PQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNL  157 (261)
T ss_dssp             HHHSCCCEEEECCCCCCC-SCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTC
T ss_pred             HhcCCCCEEEECCccCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCc
Confidence            999999999999998652 2567788999999999999999999876653                   23344455667


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccc-cCcc-ccccCCCCCHHHHHHHHHHhcC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGL-GGMY-SNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ..|+++|+|+++|+++++.|++++||++|+|+||+++|++............ ..+. ..+.+++.+|+|+|++++||++
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  237 (261)
T 3n74_A          158 AWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCS  237 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTS
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcC
Confidence            7899999999999999999999999999999999999998876543222211 1111 4566789999999999999999


Q ss_pred             CCCCcccccEEEecCceeeeec
Q 044485          227 DESKCVSGHNLVVDGGFAIVNA  248 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~~~~  248 (257)
                      +.+.+++|+++.+|||..+...
T Consensus       238 ~~~~~itG~~i~vdgG~~~~~~  259 (261)
T 3n74_A          238 PQASMITGVALDVDGGRSIGGR  259 (261)
T ss_dssp             GGGTTCCSCEEEESTTTTC---
T ss_pred             CcccCcCCcEEEecCCcccCCC
Confidence            9999999999999999988654

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=4.1e-44  Score=297.73  Aligned_cols=232  Identities=26%  Similarity=0.384  Sum_probs=194.7

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+ +.+++..+++...+   .++.++.+|++|+++++++.+ .
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~-~  100 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGG---GSAEAVVADLADLEGAANVAE-E  100 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTT---CEEEEEECCTTCHHHHHHHHH-H
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHH-H
Confidence            357899999999999999999999999999999999966 44566666665433   348899999999999999844 4


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+....|
T Consensus       101 ~~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y  178 (273)
T 3uf0_A          101 LAATRRVDVLVNNAGIIAR--APAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAY  178 (273)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHH
T ss_pred             HHhcCCCcEEEECCCCCCC--CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhH
Confidence            5567899999999998765  67889999999999999999999987766               345566677788899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++||+|++.|+|+++.|++++||+||+|+||+++|++..................|.+++.+|+|+|++++||+++.+.+
T Consensus       179 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~~  258 (273)
T 3uf0_A          179 AASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASY  258 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999999999999999999987655322111111111456788999999999999999999999


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      ++|+++.+|||..+
T Consensus       259 itG~~i~vdGG~~~  272 (273)
T 3uf0_A          259 VHGQVLAVDGGWLA  272 (273)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCCEEEECcCccC
Confidence            99999999999764

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=4e-44  Score=297.00  Aligned_cols=234  Identities=23%  Similarity=0.353  Sum_probs=197.3

Q ss_pred             ccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            5 LMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         5 ~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      .|.+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+ ...+..+.+|++++++++++++
T Consensus         3 ~m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~   81 (267)
T 3t4x_A            3 AMHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP-DAILQPVVADLGTEQGCQDVIE   81 (267)
T ss_dssp             CCCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT-TCEEEEEECCTTSHHHHHHHHH
T ss_pred             ccccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-CceEEEEecCCCCHHHHHHHHH
Confidence            466789999999999999999999999999999999999999988888887765432 2347889999999999877664


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCc
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATH  149 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~  149 (257)
                          +++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+...
T Consensus        82 ----~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  155 (267)
T 3t4x_A           82 ----KYPKVDILINNLGIFEP--VEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMA  155 (267)
T ss_dssp             ----HCCCCSEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCH
T ss_pred             ----hcCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcch
Confidence                57899999999998765  678899999999999999999999877663               455666777888


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh--------ccccCcc-----ccccCCCCCHHH
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD--------DGLGGMY-----SNLKGAVLEPED  216 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--------~~~~~~~-----~~~~~~~~~~~~  216 (257)
                      .|++||+|+++|+|+++.|++++||+||+|+||+++|++.........        +......     ..+.+++.+|+|
T Consensus       156 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ped  235 (267)
T 3t4x_A          156 HYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEE  235 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHH
Confidence            999999999999999999999999999999999999998765433210        0000010     235678999999


Q ss_pred             HHHHHHHhcCCCCCcccccEEEecCceee
Q 044485          217 AAEAALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       217 ~a~~~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      +|++++||+++.+.+++|+++.+|||...
T Consensus       236 vA~~v~fL~s~~~~~itG~~i~vdGG~~~  264 (267)
T 3t4x_A          236 IAHLVTFLSSPLSSAINGSALRIDGGLVR  264 (267)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTCSC
T ss_pred             HHHHHHHHcCccccCccCCeEEECCCccc
Confidence            99999999999999999999999999764

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.6e-44  Score=296.51  Aligned_cols=228  Identities=25%  Similarity=0.316  Sum_probs=187.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEee-CcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIAD-IKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+++|++|||||++|||+++|++|+++|++|++++ |+.+.++++.+++...+   .++.++.+|++|+++++++++++.
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~  100 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG---GKALTAQADVSDPAAVRRLFATAE  100 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHHHHHHH
Confidence            46799999999999999999999999999998874 55666777777765543   348899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchhhhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYTSS  154 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y~~s  154 (257)
                      +.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.+.+.+.             |..+..+.+....|++|
T Consensus       101 ~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  178 (267)
T 3u5t_A          101 EAFGGVDVLVNNAGIMPL--TTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAA  178 (267)
T ss_dssp             HHHSCEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHH
Confidence            999999999999998755  678899999999999999999999887763             34455667778899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      |+|+++|+++++.|++++||+||+|+||+++|++.......  .....+ ...|.+++.+|+|+|++++||+++.+.+++
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~it  256 (267)
T 3u5t_A          179 KAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSD--EVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVN  256 (267)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCC
T ss_pred             HHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence            99999999999999999999999999999999986542211  111111 145667899999999999999999999999


Q ss_pred             ccEEEecCce
Q 044485          234 GHNLVVDGGF  243 (257)
Q Consensus       234 G~~~~~dgG~  243 (257)
                      |+++.+|||.
T Consensus       257 G~~i~vdGG~  266 (267)
T 3u5t_A          257 GQVLRANGGI  266 (267)
T ss_dssp             SEEEEESSSC
T ss_pred             CCEEEeCCCc
Confidence            9999999996

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.2e-44  Score=296.81  Aligned_cols=229  Identities=28%  Similarity=0.416  Sum_probs=194.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++++|++|||||++|||+++|++|+++|++|++++++. +.++++.+++...+   .++.++.+|++|+++++++++++
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~  103 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG---GRAVAIRADNRDAEAIEQAIRET  103 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999987654 56677777776543   34889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhcccc-CCCCchhh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCGIIG-GAATHAYT  152 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~~~-~~~~~~y~  152 (257)
                      .+.+|++|+||||||+...  .++.+.+.++|++.+++|+.+++.+.+.+..             ..+..+ .+....|+
T Consensus       104 ~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~  181 (271)
T 3v2g_A          104 VEALGGLDILVNSAGIWHS--APLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYS  181 (271)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHH
T ss_pred             HHHcCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHH
Confidence            9999999999999998765  6788999999999999999999999877742             233333 56778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      +||+|+++|+++++.|++++||+||+|+||+++|++..........   .....+.+++.+|+|+|++++||+++.+.++
T Consensus       182 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~r~~~pedvA~~v~fL~s~~~~~i  258 (271)
T 3v2g_A          182 ASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEA---QRERIATGSYGEPQDIAGLVAWLAGPQGKFV  258 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHH---HHHTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHH---HHhcCCCCCCCCHHHHHHHHHHHhCcccCCc
Confidence            9999999999999999999999999999999999986432111000   0114566788999999999999999999999


Q ss_pred             cccEEEecCcee
Q 044485          233 SGHNLVVDGGFA  244 (257)
Q Consensus       233 ~G~~~~~dgG~~  244 (257)
                      +|+++.+|||..
T Consensus       259 tG~~i~vdGG~~  270 (271)
T 3v2g_A          259 TGASLTIDGGAN  270 (271)
T ss_dssp             CSCEEEESTTTT
T ss_pred             cCCEEEeCcCcc
Confidence            999999999964

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.4e-43  Score=300.55  Aligned_cols=233  Identities=31%  Similarity=0.490  Sum_probs=193.9

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc------------chhhHhHHHHhccCCCCCCCceeEecCCC
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK------------DDLGESVCKDIGSSSSSASGCSYVHCDVT   74 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~   74 (257)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+   .++.++.+|++
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~  117 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG---RRIIARQADVR  117 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC---CeEEEEECCCC
Confidence            457899999999999999999999999999999999876            455566666655433   34889999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------h
Q 044485           75 KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------G  138 (257)
Q Consensus        75 ~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s  138 (257)
                      |+++++++++++.+.+|++|+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+.                |
T Consensus       118 d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS  195 (317)
T 3oec_A          118 DLASLQAVVDEALAEFGHIDILVSNVGISNQ--GEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSS  195 (317)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECc
Confidence            9999999999999999999999999998765  678899999999999999999999877663                3


Q ss_pred             hhccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh---hh-----------ccccCcc
Q 044485          139 VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL---AD-----------DGLGGMY  204 (257)
Q Consensus       139 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~---~~-----------~~~~~~~  204 (257)
                      ..+..+.+....|++||+|++.|+++++.|++++||+||+|+||+++|++.......   .+           .......
T Consensus       196 ~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (317)
T 3oec_A          196 TVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLT  275 (317)
T ss_dssp             GGGSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTC
T ss_pred             HHhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhc
Confidence            445556677789999999999999999999999999999999999999986532110   00           0000111


Q ss_pred             ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceee
Q 044485          205 SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       205 ~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ..+ +++.+|+|+|++++||+++.+.+++|++|.+|||..+
T Consensus       276 ~~p-~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~  315 (317)
T 3oec_A          276 LLP-IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA  315 (317)
T ss_dssp             SSS-SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             cCC-CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhh
Confidence            222 6788999999999999999999999999999999864

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=1.8e-43  Score=290.66  Aligned_cols=232  Identities=22%  Similarity=0.347  Sum_probs=195.9

Q ss_pred             CcccccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCC--CCHHH
Q 044485            1 MHANLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDV--TKEKD   78 (257)
Q Consensus         1 ~~~~~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~--~~~~~   78 (257)
                      |+.......+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+  .++.++.+|+  +|+++
T Consensus         1 M~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~   78 (252)
T 3f1l_A            1 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG--RQPQWFILDLLTCTSEN   78 (252)
T ss_dssp             CCCCCCTTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--CCCEEEECCTTTCCHHH
T ss_pred             CCcCCcccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--CCceEEEEecccCCHHH
Confidence            4433334568999999999999999999999999999999999999988888777754332  2378899999  99999


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccc
Q 044485           79 IENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGII  143 (257)
Q Consensus        79 v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~  143 (257)
                      ++++++++.+.++++|+||||||..... .++.+.+.++|++.+++|+.+++++.+.+.               |..+..
T Consensus        79 ~~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~  157 (252)
T 3f1l_A           79 CQQLAQRIAVNYPRLDGVLHNAGLLGDV-CPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ  157 (252)
T ss_dssp             HHHHHHHHHHHCSCCSEEEECCCCCCCC-SCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS
T ss_pred             HHHHHHHHHHhCCCCCEEEECCccCCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc
Confidence            9999999999999999999999985432 578899999999999999999999987763               445666


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHH
Q 044485          144 GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       144 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  223 (257)
                      +.+....|++||+|+++|+|+++.|++++ ||||+|+||+++|++.......          .+..++.+|+|+|+.++|
T Consensus       158 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~----------~~~~~~~~p~dva~~~~~  226 (252)
T 3f1l_A          158 GRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPT----------EDPQKLKTPADIMPLYLW  226 (252)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTT----------CCGGGSBCTGGGHHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCc----------cchhccCCHHHHHHHHHH
Confidence            77778899999999999999999999987 9999999999999987653221          112356799999999999


Q ss_pred             hcCCCCCcccccEEEecCceeee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      |+++.+.+++|+++.+|||....
T Consensus       227 L~s~~~~~itG~~i~vdgG~~~~  249 (252)
T 3f1l_A          227 LMGDDSRRKTGMTFDAQPGRKPG  249 (252)
T ss_dssp             HHSGGGTTCCSCEEESSCC----
T ss_pred             HcCccccCCCCCEEEeCCCcCCC
Confidence            99999999999999999998543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=9e-44  Score=293.27  Aligned_cols=231  Identities=27%  Similarity=0.418  Sum_probs=179.0

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |++++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++.+|++|++++++++++
T Consensus         1 M~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~   74 (257)
T 3tpc_A            1 MVMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG------AAVRFRNADVTNEADATAALAF   74 (257)
T ss_dssp             ---CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------------CEEEECCTTCHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC------CceEEEEccCCCHHHHHHHHHH
Confidence            5568999999999999999999999999999999999999988777766652      2488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCC--CCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------------hhcc
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKP--NILDNDQAEFERILSINLVGAFLGRNMLLG---------------------VCGI  142 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------------~~~~  142 (257)
                      +.+.+|++|+||||||.......  ...+.+.++|++.+++|+.+++++.+.+..                     ..+.
T Consensus        75 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tpc_A           75 AKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAF  154 (257)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhc
Confidence            99999999999999998754211  123678999999999999999998777643                     2344


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcccccc-CCCCCHHHHHHHH
Q 044485          143 IGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAA  221 (257)
Q Consensus       143 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~  221 (257)
                      .+.+....|++||+|+++|+|+++.|++++||++|+|+||+++|++............  ....|. +++.+|+|+|+++
T Consensus       155 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~--~~~~p~~~r~~~~~dva~~v  232 (257)
T 3tpc_A          155 DGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDAL--AASVPFPPRLGRAEEYAALV  232 (257)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCSSSSCSCBCHHHHHHHH
T ss_pred             cCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHH--HhcCCCCCCCCCHHHHHHHH
Confidence            4566778999999999999999999999999999999999999998765432211111  113444 7889999999999


Q ss_pred             HHhcCCCCCcccccEEEecCceeee
Q 044485          222 LYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       222 ~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +||+++  .+++|+++.+|||..+.
T Consensus       233 ~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          233 KHICEN--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHHC--TTCCSCEEEESTTCCC-
T ss_pred             HHHccc--CCcCCcEEEECCCccCC
Confidence            999986  68999999999998765

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=1.6e-43  Score=293.07  Aligned_cols=247  Identities=23%  Similarity=0.221  Sum_probs=202.6

Q ss_pred             cccccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         6 ~~~~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      |++++++|++|||||+  +|||+++|++|+++|++|++++|+....+...+.......  .++.++.+|++|++++++++
T Consensus         1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~   78 (266)
T 3oig_A            1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR--NDSIILPCDVTNDAEIETCF   78 (266)
T ss_dssp             CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS--CCCEEEECCCSSSHHHHHHH
T ss_pred             CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC--CCceEEeCCCCCHHHHHHHH
Confidence            4568899999999999  6699999999999999999999987655555444443332  24899999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEV--KPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAAT  148 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~  148 (257)
                      +++.+.++++|+||||||.....  ..++.+.+.++|++.+++|+.+++.+.+.+.             |..+..+.+..
T Consensus        79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~  158 (266)
T 3oig_A           79 ASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNY  158 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTT
T ss_pred             HHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCc
Confidence            99999999999999999986521  2567889999999999999999999987773             44566677778


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      ..|++||+|+++|+++++.|++++||++|+|+||+++|++.+................+.+++.+|+|+|+.++||+++.
T Consensus       159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~  238 (266)
T 3oig_A          159 NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDM  238 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence            89999999999999999999999999999999999999987654221111111111455678899999999999999999


Q ss_pred             CCcccccEEEecCceeeeecceeecc
Q 044485          229 SKCVSGHNLVVDGGFAIVNAGFSVFG  254 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~~~~~~~~~~  254 (257)
                      +.+++|+.+.+|||+....+..+++.
T Consensus       239 ~~~~tG~~i~vdGG~~~~~~~~~~~~  264 (266)
T 3oig_A          239 SRGITGENLHVDSGFHITARLEHHHH  264 (266)
T ss_dssp             GTTCCSCEEEESTTGGGCCCCC----
T ss_pred             hhcCcCCEEEECCCeEEeeecCCCCC
Confidence            99999999999999999887776654

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-43  Score=290.77  Aligned_cols=230  Identities=26%  Similarity=0.391  Sum_probs=200.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|+++++++++++.+
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG---FKARGLVLNISDIESIQNFFAEIKA   78 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999998888888776543   3488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|++
T Consensus        79 ~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  156 (247)
T 3lyl_A           79 ENLAIDILVNNAGITRD--NLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCA  156 (247)
T ss_dssp             TTCCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHH
Confidence            99999999999998765  678889999999999999999999876652               4455667788889999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      ||+|++.|+++++.|++++||++|+|+||+++|++.+...........  ...+.+++.+|+|+|+.++||+++.+.+++
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~i~~l~s~~~~~~t  234 (247)
T 3lyl_A          157 AKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIA--TKIPSGQIGEPKDIAAAVAFLASEEAKYIT  234 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHH--TTSTTCCCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHh--hcCCCCCCcCHHHHHHHHHHHhCCCcCCcc
Confidence            999999999999999999999999999999999987654222111111  135567889999999999999999999999


Q ss_pred             ccEEEecCceee
Q 044485          234 GHNLVVDGGFAI  245 (257)
Q Consensus       234 G~~~~~dgG~~~  245 (257)
                      |+.+++|||+.+
T Consensus       235 G~~i~vdgG~~~  246 (247)
T 3lyl_A          235 GQTLHVNGGMYM  246 (247)
T ss_dssp             SCEEEESTTSSC
T ss_pred             CCEEEECCCEec
Confidence            999999999875

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1.1e-43  Score=298.57  Aligned_cols=238  Identities=22%  Similarity=0.217  Sum_probs=197.2

Q ss_pred             ccccCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGAR--GIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         7 ~~~~~~k~~lItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      ++++++|++|||||++  |||+++|++|+++|++|++++|+.+..+...+.....+    .+.++.+|++|+++++++++
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~  100 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG----VKLTVPCDVSDAESVDNMFK  100 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT----CCEEEECCTTCHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC----CeEEEEcCCCCHHHHHHHHH
Confidence            3468999999999997  99999999999999999999999765544444333222    26789999999999999999


Q ss_pred             HHHHHcCCccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCc
Q 044485           85 TAVTQYGKLDIMFNNAGTVDE--VKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATH  149 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~  149 (257)
                      ++.+.+|++|+||||||+...  ...++.+.+.++|++.+++|+.+++.+.+.+.             |..+..+.+...
T Consensus       101 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~  180 (296)
T 3k31_A          101 VLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYN  180 (296)
T ss_dssp             HHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTT
T ss_pred             HHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCch
Confidence            999999999999999998642  01467889999999999999999999988763             445556677788


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      .|++||+|+++|+|+++.|++++||+||+|+||+++|++..................|.+++.+|+|+|++++||+++.+
T Consensus       181 ~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a  260 (296)
T 3k31_A          181 VMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLG  260 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcc
Confidence            99999999999999999999999999999999999999865432211110111114567889999999999999999999


Q ss_pred             CcccccEEEecCceeeeec
Q 044485          230 KCVSGHNLVVDGGFAIVNA  248 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~~~~  248 (257)
                      .+++|+++.+|||..+...
T Consensus       261 ~~itG~~i~vdGG~~~~~~  279 (296)
T 3k31_A          261 RGTTGETVHVDCGYHVVGM  279 (296)
T ss_dssp             TTCCSCEEEESTTGGGCSS
T ss_pred             CCccCCEEEECCCccccCC
Confidence            9999999999999988743

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.3e-43  Score=297.70  Aligned_cols=238  Identities=24%  Similarity=0.243  Sum_probs=190.9

Q ss_pred             cccccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         6 ~~~~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      ++.++++|++|||||+  +|||+++|++|+++|++|++++|+.+..+...+......    ++.++.+|++|++++++++
T Consensus        25 ~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~  100 (293)
T 3grk_A           25 QSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG----AFVAGHCDVADAASIDAVF  100 (293)
T ss_dssp             --CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT----CEEEEECCTTCHHHHHHHH
T ss_pred             ccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC----CceEEECCCCCHHHHHHHH
Confidence            3457899999999999  559999999999999999999999654333332222211    3789999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDE--VKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAAT  148 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~  148 (257)
                      +++.+.++++|+||||||+...  ...++.+.+.++|++.+++|+.+++.+.+.+.             |..+..+.+..
T Consensus       101 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~  180 (293)
T 3grk_A          101 ETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNY  180 (293)
T ss_dssp             HHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTT
T ss_pred             HHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCch
Confidence            9999999999999999998741  02568889999999999999999999987763             44555667778


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      ..|++||+|++.|+|+++.|++++||+||+|+||+++|++..................+.+++.+|+|+|++++||+++.
T Consensus       181 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  260 (293)
T 3grk_A          181 NVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDL  260 (293)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            89999999999999999999999999999999999999986543221110000111456788999999999999999999


Q ss_pred             CCcccccEEEecCceeeee
Q 044485          229 SKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~~~  247 (257)
                      +.+++|+++.+|||..+..
T Consensus       261 ~~~itG~~i~vdGG~~~~~  279 (293)
T 3grk_A          261 SRSVTGEVHHADSGYHVIG  279 (293)
T ss_dssp             GTTCCSCEEEESTTGGGBC
T ss_pred             ccCCcceEEEECCCcccCC
Confidence            9999999999999998874

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=4.6e-43  Score=290.38  Aligned_cols=232  Identities=28%  Similarity=0.417  Sum_probs=194.5

Q ss_pred             ccccCCcEEEEecCC-CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGA-RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         7 ~~~~~~k~~lItGas-~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ++++++|++|||||+ +|||+++|++|+++|++|++++|+.+.+++..+++....+  .++.++.+|++|++++++++++
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~   94 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGL--GRVEAVVCDVTSTEAVDALITQ   94 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCS--SCEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCC--CceEEEEeCCCCHHHHHHHHHH
Confidence            346899999999998 5999999999999999999999999998888888865442  3489999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCc
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATH  149 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~  149 (257)
                      +.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.                |..+..+.+...
T Consensus        95 ~~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  172 (266)
T 3o38_A           95 TVEKAGRLDVLVNNAGLGGQ--TPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQS  172 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCH
T ss_pred             HHHHhCCCcEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCc
Confidence            99999999999999998765  678899999999999999999999877663                344555667788


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      .|+++|+|++.|+++++.|++++||++|+|+||+++|++.+.....  ....... ..+.+++.+|+|+|+.++||+++.
T Consensus       173 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~  250 (266)
T 3o38_A          173 HYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSS--ELLDRLASDEAFGRAAEPWEVAATIAFLASDY  250 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------CCTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcH--HHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999999987654321  1111111 456678999999999999999999


Q ss_pred             CCcccccEEEecCcee
Q 044485          229 SKCVSGHNLVVDGGFA  244 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~  244 (257)
                      +.+++|+++.+|||..
T Consensus       251 ~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          251 SSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             GTTCCSCEEEESSCCC
T ss_pred             ccCccCCEEEEcCCcC
Confidence            9999999999999963

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=5.6e-43  Score=287.24  Aligned_cols=230  Identities=30%  Similarity=0.455  Sum_probs=184.5

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      |+.++++|++|||||++|||++++++|+++|++|++++|+. +.+++..++   .+   .++.++.+|++|+++++++++
T Consensus         1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~~Dv~~~~~v~~~~~   74 (249)
T 2ew8_A            1 MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRN---LG---RRVLTVKCDVSQPGDVEAFGK   74 (249)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH---TT---CCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHh---cC---CcEEEEEeecCCHHHHHHHHH
Confidence            44568899999999999999999999999999999999998 665542222   22   248889999999999999999


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCc
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATH  149 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~  149 (257)
                      ++.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+...
T Consensus        75 ~~~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  152 (249)
T 2ew8_A           75 QVISTFGRCDILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYT  152 (249)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCH
T ss_pred             HHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCch
Confidence            999999999999999998754  678889999999999999999999877652               344555667778


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH-hHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK-DFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      .|++||++++.|+++++.|++++||++|+|+||+++|++.. ......+.....+. .|.+++.+|+|+|+.++||+++.
T Consensus       153 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~dva~~~~~l~s~~  231 (249)
T 2ew8_A          153 HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML-QAIPRLQVPLDLTGAAAFLASDD  231 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTT-SSSCSCCCTHHHHHHHHHHTSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhh-CccCCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999999865 32211011111111 45678899999999999999998


Q ss_pred             CCcccccEEEecCcee
Q 044485          229 SKCVSGHNLVVDGGFA  244 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~  244 (257)
                      +.+++|+.+.+|||..
T Consensus       232 ~~~~tG~~~~vdGG~~  247 (249)
T 2ew8_A          232 ASFITGQTLAVDGGMV  247 (249)
T ss_dssp             GTTCCSCEEEESSSCC
T ss_pred             cCCCCCcEEEECCCcc
Confidence            8999999999999975

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-43  Score=292.23  Aligned_cols=232  Identities=27%  Similarity=0.421  Sum_probs=195.5

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |+.++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|++++++++++
T Consensus         1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~   77 (262)
T 1zem_A            1 MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG---VEARSYVCDVTSEEAVIGTVDS   77 (262)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHH
Confidence            4456889999999999999999999999999999999999988888877775542   3488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCC-CCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCc
Q 044485           86 AVTQYGKLDIMFNNAGTV-DEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATH  149 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~  149 (257)
                      +.+.++++|+||||||.. ..  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+...
T Consensus        78 ~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  155 (262)
T 1zem_A           78 VVRDFGKIDFLFNNAGYQGAF--APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMA  155 (262)
T ss_dssp             HHHHHSCCCEEEECCCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBH
T ss_pred             HHHHhCCCCEEEECCCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCc
Confidence            999999999999999976 33  567889999999999999999999876653               334555667778


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhh-----------h-hhc-cccCc-cccccCCCCCHH
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLK-----------L-ADD-GLGGM-YSNLKGAVLEPE  215 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~-----------~-~~~-~~~~~-~~~~~~~~~~~~  215 (257)
                      .|++||++++.|+++++.|++++||++|+|+||+++|++......           . .++ ....+ ...|.+++.+|+
T Consensus       156 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  235 (262)
T 1zem_A          156 AYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN  235 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHH
Confidence            999999999999999999999999999999999999998754310           0 000 00101 134667899999


Q ss_pred             HHHHHHHHhcCCCCCcccccEEEecCc
Q 044485          216 DAAEAALYLGSDESKCVSGHNLVVDGG  242 (257)
Q Consensus       216 ~~a~~~~~l~s~~~~~~~G~~~~~dgG  242 (257)
                      |+|+.++||+++.+.+++|+++.+|||
T Consensus       236 dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          236 EIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             GSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            999999999999999999999999998

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=3.5e-43  Score=294.75  Aligned_cols=234  Identities=25%  Similarity=0.368  Sum_probs=197.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh-hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+. .++..+++...+   .++.++.+|++|+++++++++++
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~  119 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG---VKCVLLPGDLSDEQHCKDIVQET  119 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT---CCEEEEESCTTSHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998764 344444454332   34889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchhhh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y~~  153 (257)
                      .+.++++|+||||||..... .++.+.+.++|++.+++|+.+++++.+.+.             |..+..+.+....|++
T Consensus       120 ~~~~g~iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  198 (291)
T 3ijr_A          120 VRQLGSLNILVNNVAQQYPQ-QGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSA  198 (291)
T ss_dssp             HHHHSSCCEEEECCCCCCCC-SSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHH
T ss_pred             HHHcCCCCEEEECCCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHH
Confidence            99999999999999986432 568888999999999999999999988774             3445556777889999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      ||+|+++|+|+++.|++++||+||+|+||+++|++......... ........+.+++.+|+|+|++++||+++.+.+++
T Consensus       199 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~it  277 (291)
T 3ijr_A          199 TKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKK-VSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVT  277 (291)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHH-HHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHH-HHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCCc
Confidence            99999999999999999999999999999999998754322111 00011145667899999999999999999999999


Q ss_pred             ccEEEecCceeee
Q 044485          234 GHNLVVDGGFAIV  246 (257)
Q Consensus       234 G~~~~~dgG~~~~  246 (257)
                      |+++.+|||..+.
T Consensus       278 G~~i~vdGG~~~~  290 (291)
T 3ijr_A          278 GQMIHVNGGVIVN  290 (291)
T ss_dssp             SCEEEESSSCCCC
T ss_pred             CCEEEECCCcccC
Confidence            9999999998764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=6.9e-43  Score=288.87  Aligned_cols=236  Identities=25%  Similarity=0.333  Sum_probs=197.5

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |.+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++....+  .++.++.+|++|++++++++++
T Consensus         1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~   78 (263)
T 3ai3_A            1 MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG--VRVLEVAVDVATPEGVDAVVES   78 (263)
T ss_dssp             CCCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHH
Confidence            34568899999999999999999999999999999999998888777776643211  2388899999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~  150 (257)
                      +.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....
T Consensus        79 ~~~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  156 (263)
T 3ai3_A           79 VRSSFGGADILVNNAGTGSN--ETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPI  156 (263)
T ss_dssp             HHHHHSSCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcch
Confidence            99999999999999998754  678899999999999999999999877663               3344455667789


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh--------hhccccCcc-c-cccCCCCCHHHHHHH
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL--------ADDGLGGMY-S-NLKGAVLEPEDAAEA  220 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~--------~~~~~~~~~-~-~~~~~~~~~~~~a~~  220 (257)
                      |++||++++.|+++++.|++++||++|+|+||+++|++.......        .+....... . .|.+++.+|+|+|+.
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~  236 (263)
T 3ai3_A          157 YNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANF  236 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999999987653220        000001111 2 456788999999999


Q ss_pred             HHHhcCCCCCcccccEEEecCceee
Q 044485          221 ALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       221 ~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ++||+++.+.+++|+.+.+|||..+
T Consensus       237 ~~~l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          237 FVFLCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             HHHHTSTTCTTCCSCEEEESTTCCC
T ss_pred             HHHHcCccccCCCCcEEEECCCccc
Confidence            9999999888999999999999765

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=6.7e-43  Score=290.51  Aligned_cols=234  Identities=23%  Similarity=0.374  Sum_probs=192.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+   .++.++.+|++|+++++++++++.
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   93 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG---LNVEGSVCDLLSRTERDKLMQTVA   93 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988888777775432   248899999999999999999999


Q ss_pred             HHc-CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           88 TQY-GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      +.+ +++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|
T Consensus        94 ~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  171 (273)
T 1ae1_A           94 HVFDGKLNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLY  171 (273)
T ss_dssp             HHTTSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHcCCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchh
Confidence            999 899999999998654  678899999999999999999999877663               34455566777899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh---hhccccCc-cccccCCCCCHHHHHHHHHHhcCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL---ADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ++||+|++.|+++++.|++++||++|+|+||+++|++.......   ........ ...|.+++.+|+|+|+.++||+++
T Consensus       172 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~  251 (273)
T 1ae1_A          172 SASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFP  251 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999999986543210   00000111 134567889999999999999999


Q ss_pred             CCCcccccEEEecCceeee
Q 044485          228 ESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~~  246 (257)
                      .+.+++|+++.+|||..+.
T Consensus       252 ~~~~~tG~~i~vdGG~~~~  270 (273)
T 1ae1_A          252 AASYITGQIIWADGGFTAN  270 (273)
T ss_dssp             GGTTCCSCEEEESTTGGGC
T ss_pred             cccCcCCCEEEECCCcccC
Confidence            9999999999999998653

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=8.9e-43  Score=289.46  Aligned_cols=232  Identities=26%  Similarity=0.401  Sum_probs=193.4

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+. +..++..+++...+   .++.++.+|++|++++++++++
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~  100 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG---YKAAVIKFDAASESDFIEAIQT  100 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CceEEEECCCCCHHHHHHHHHH
Confidence            3478999999999999999999999999999999999954 44555666665443   3488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~  150 (257)
                      +.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.++...
T Consensus       101 ~~~~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  178 (271)
T 4iin_A          101 IVQSDGGLSYLVNNAGVVRD--KLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTN  178 (271)
T ss_dssp             HHHHHSSCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHH
T ss_pred             HHHhcCCCCEEEECCCcCCC--cccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchH
Confidence            99999999999999998765  678889999999999999999999877663               4456667788889


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      |++||+|++.|++.++.|++++||++++|+||+++|++.+........  ......+.+++.+|+|+|++++||+++.+.
T Consensus       179 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~  256 (271)
T 4iin_A          179 YSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKA--DYVKNIPLNRLGSAKEVAEAVAFLLSDHSS  256 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHH--HHHhcCCcCCCcCHHHHHHHHHHHhCCCcC
Confidence            999999999999999999999999999999999999987664322111  111145667889999999999999999999


Q ss_pred             cccccEEEecCceee
Q 044485          231 CVSGHNLVVDGGFAI  245 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~  245 (257)
                      +++|+++.+|||+.+
T Consensus       257 ~itG~~i~vdGG~~~  271 (271)
T 4iin_A          257 YITGETLKVNGGLYM  271 (271)
T ss_dssp             TCCSCEEEESTTSCC
T ss_pred             CCcCCEEEeCCCeeC
Confidence            999999999999864

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=3.4e-43  Score=288.69  Aligned_cols=229  Identities=23%  Similarity=0.294  Sum_probs=189.4

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |..++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++....+...++.++.+|++|++++++++++
T Consensus         1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            1 MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             ----CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence            44578899999999999999999999999999999999999998888887765432224588999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~  150 (257)
                      +.+.++++|+||||||....  .++ +.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....
T Consensus        81 ~~~~~g~iD~lvnnAg~~~~--~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  157 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMFMD--GSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGI  157 (250)
T ss_dssp             HHHHHCCEEEEEECCCCCCC--CCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTH
T ss_pred             HHHhcCCCCEEEECCCcCCC--CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcc
Confidence            99999999999999998754  455 77899999999999999999977763               3444554556789


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC-
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES-  229 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~-  229 (257)
                      |++||+|+++|+|+++.|++++||++|+|+||+++|++.+....          ..+.+++.+|+|+|+.++||+++.. 
T Consensus       158 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----------~~~~~~~~~p~dva~~v~~l~s~~~~  227 (250)
T 3nyw_A          158 YGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGT----------PFKDEEMIQPDDLLNTIRCLLNLSEN  227 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTC----------CSCGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCC----------CcccccCCCHHHHHHHHHHHHcCCCc
Confidence            99999999999999999999999999999999999998765321          1234568899999999999999764 


Q ss_pred             CcccccEEEecCceeeee
Q 044485          230 KCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~~~  247 (257)
                      .+++|..+.+|||.....
T Consensus       228 ~~~~~~~i~vd~~~~~~~  245 (250)
T 3nyw_A          228 VCIKDIVFEMKKSIIEGH  245 (250)
T ss_dssp             EECCEEEEEEHHHHHC--
T ss_pred             eEeeEEEEEeeccccccc
Confidence            467899999999987653

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-42  Score=288.35  Aligned_cols=237  Identities=32%  Similarity=0.509  Sum_probs=195.7

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++..... +.++.++.+|++|+++++++++++
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~   86 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP-DAEVLTTVADVSDEAQVEAYVTAT   86 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT-TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEccCCCHHHHHHHHHHH
Confidence            4468899999999999999999999999999999999999888877776643211 124889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||..... .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|
T Consensus        87 ~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  165 (267)
T 1iy8_A           87 TERFGRIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGY  165 (267)
T ss_dssp             HHHHSCCSEEEECCCCCCCC-BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHH
T ss_pred             HHHcCCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccH
Confidence            99999999999999976421 457788999999999999999998866653               34455566777899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh-hhcccc----Ccc-ccccCCCCCHHHHHHHHHHhc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL-ADDGLG----GMY-SNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~----~~~-~~~~~~~~~~~~~a~~~~~l~  225 (257)
                      ++||++++.|+++++.|++++||++|+|+||+++|++....... .+....    .+. ..|.+++.+|+|+|+.++||+
T Consensus       166 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~  245 (267)
T 1iy8_A          166 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLL  245 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999987653111 111111    111 345678899999999999999


Q ss_pred             CCCCCcccccEEEecCceee
Q 044485          226 SDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       226 s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ++.+.+++|+.+.+|||..+
T Consensus       246 s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          246 SDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             CccccCCCCCEEEECCCccc
Confidence            99999999999999999754

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=4.8e-43  Score=293.21  Aligned_cols=232  Identities=25%  Similarity=0.365  Sum_probs=189.2

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc------------chhhHhHHHHhccCCCCCCCceeEecCCC
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK------------DDLGESVCKDIGSSSSSASGCSYVHCDVT   74 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~   74 (257)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+   .++.++.+|++
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~   81 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG---RKAYTAEVDVR   81 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT---SCEEEEECCTT
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC---CceEEEEccCC
Confidence            357899999999999999999999999999999999987            555666666655433   34889999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh-------------c
Q 044485           75 KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC-------------G  141 (257)
Q Consensus        75 ~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~-------------~  141 (257)
                      |+++++++++++.+.++++|+||||||+...  .  .+.+.++|++.+++|+.+++++.+.+....             +
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  157 (287)
T 3pxx_A           82 DRAAVSRELANAVAEFGKLDVVVANAGICPL--G--AHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAG  157 (287)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCcc--c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchh
Confidence            9999999999999999999999999998754  2  347889999999999999999988775332             2


Q ss_pred             cccC-----------CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh---hcccc------
Q 044485          142 IIGG-----------AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA---DDGLG------  201 (257)
Q Consensus       142 ~~~~-----------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~---~~~~~------  201 (257)
                      ..+.           +....|++||+|+++|+++++.|++++||+||+|+||+++|++.+......   +....      
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T 3pxx_A          158 LIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADA  237 (287)
T ss_dssp             HHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred             cccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHH
Confidence            2222           345679999999999999999999999999999999999999875422110   00000      


Q ss_pred             ----CccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceee
Q 044485          202 ----GMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       202 ----~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                          .......+++.+|+|+|++++||+++.+.+++|+++.+|||..+
T Consensus       238 ~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          238 LLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             HHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence                01111226789999999999999999999999999999999875

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=7e-43  Score=289.76  Aligned_cols=229  Identities=29%  Similarity=0.465  Sum_probs=192.9

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+...             ..+..+++|++|+++++++++++
T Consensus         9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A            9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-------------NVSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-------------TSSEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-------------CceeEEEecCCCHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999876431             12678899999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|
T Consensus        76 ~~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  153 (269)
T 3vtz_A           76 TKKYGRIDILVNNAGIEQY--SPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAY  153 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHH
T ss_pred             HHHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhH
Confidence            9999999999999998755  678899999999999999999999977663               44555667778899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc--------cccCc-cccccCCCCCHHHHHHHHH
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD--------GLGGM-YSNLKGAVLEPEDAAEAAL  222 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~a~~~~  222 (257)
                      ++||+|+++|+++++.|+++ ||+||+|+||+++|++..........        ....+ ...+.+++.+|+|+|+.++
T Consensus       154 ~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  232 (269)
T 3vtz_A          154 VTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVA  232 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            99999999999999999998 99999999999999997654322110        00111 1456788999999999999


Q ss_pred             HhcCCCCCcccccEEEecCceeeeeccee
Q 044485          223 YLGSDESKCVSGHNLVVDGGFAIVNAGFS  251 (257)
Q Consensus       223 ~l~s~~~~~~~G~~~~~dgG~~~~~~~~~  251 (257)
                      ||+++.+.+++|+++.+|||.....+-..
T Consensus       233 ~L~s~~~~~itG~~i~vdGG~~~~~~~~~  261 (269)
T 3vtz_A          233 FLASDRSSFITGACLTVDGGLLSKLPIST  261 (269)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGBCCCCC
T ss_pred             HHhCCccCCCcCcEEEECCCccccCCCCC
Confidence            99999999999999999999987755433

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=1.3e-42  Score=286.88  Aligned_cols=232  Identities=26%  Similarity=0.357  Sum_probs=196.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|+++++++++++.+
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   82 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG---FKVEASVCDLSSRSERQELMNTVAN   82 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988888777775432   3488899999999999999999999


Q ss_pred             Hc-CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           89 QY-GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        89 ~~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      .+ +++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.               |..+..+.+....|+
T Consensus        83 ~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (260)
T 2ae2_A           83 HFHGKLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYG  160 (260)
T ss_dssp             HTTTCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HcCCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHH
Confidence            99 899999999998754  567889999999999999999999876663               334455667778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh--ccccCc-cccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD--DGLGGM-YSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      +||++++.|+++++.|++++||++|+|+||+++|++.........  ...... ...+.+++.+|+|+|+.++||+++.+
T Consensus       161 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~  240 (260)
T 2ae2_A          161 ATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAA  240 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999999999999998754321110  000011 13456778999999999999999988


Q ss_pred             CcccccEEEecCceee
Q 044485          230 KCVSGHNLVVDGGFAI  245 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~  245 (257)
                      .+++|+.+.+|||..+
T Consensus       241 ~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          241 SYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCCCCEEEECCCccc
Confidence            9999999999999764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1e-42  Score=290.02  Aligned_cols=229  Identities=30%  Similarity=0.459  Sum_probs=186.0

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc------------chhhHhHHHHhccCCCCCCCceeEecCCC
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK------------DDLGESVCKDIGSSSSSASGCSYVHCDVT   74 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~   74 (257)
                      +.++.+|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+   .++.++.+|++
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~   84 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG---SRIVARQADVR   84 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT---CCEEEEECCTT
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC---CeEEEEeCCCC
Confidence            357899999999999999999999999999999999987            555666666554432   34899999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------
Q 044485           75 KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------  138 (257)
Q Consensus        75 ~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------  138 (257)
                      |+++++++++++.+.++++|+||||||+...  .    .+.++|++.+++|+.+++++.+.+.+                
T Consensus        85 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS  158 (278)
T 3sx2_A           85 DRESLSAALQAGLDELGRLDIVVANAGIAPM--S----AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS  158 (278)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCC--S----STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--C----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcc
Confidence            9999999999999999999999999997643  1    15899999999999999999777633                


Q ss_pred             hhccccC----CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh-----hh---ccccCcc-c
Q 044485          139 VCGIIGG----AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL-----AD---DGLGGMY-S  205 (257)
Q Consensus       139 ~~~~~~~----~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~-----~~---~~~~~~~-~  205 (257)
                      ..+..+.    +....|++||+|+++|+++++.|++++||+||+|+||+++|++.......     ..   .....+. .
T Consensus       159 ~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (278)
T 3sx2_A          159 SAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNA  238 (278)
T ss_dssp             GGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCS
T ss_pred             HHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhh
Confidence            2233333    44557999999999999999999999999999999999999987532110     00   0011111 2


Q ss_pred             cccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceee
Q 044485          206 NLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       206 ~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      .+ +++.+|+|+|+.++||+++.+.+++|+++.+|||+.+
T Consensus       239 ~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          239 MP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             SS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             cC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            33 6788999999999999999999999999999999764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-42  Score=288.21  Aligned_cols=232  Identities=28%  Similarity=0.448  Sum_probs=195.0

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHh-ccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI-GSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~-~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ..++.+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ ...+   .++.++.+|++|++++++++++
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dl~~~~~v~~~~~~   92 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG---VETMAFRCDVSNYEEVKKLLEA   92 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC---CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHHHHH
Confidence            45788999999999999999999999999999999999988887777666 2211   2478899999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhh-ccccCCCCc
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVC-GIIGGAATH  149 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~-~~~~~~~~~  149 (257)
                      +.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |.. +..+.+...
T Consensus        93 ~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  170 (267)
T 1vl8_A           93 VKEKFGKLDTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNIS  170 (267)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCH
T ss_pred             HHHHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCCh
Confidence            99999999999999998754  678889999999999999999999877662               333 445566778


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      .|++||++++.|+++++.|++++||++|+|+||+++|++....... +.....+ ...+.+++.+|+|+|+.++||+++.
T Consensus       171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~  249 (267)
T 1vl8_A          171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD-PEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEE  249 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC-HHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccC-hHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999999987653211 1100111 1345677899999999999999998


Q ss_pred             CCcccccEEEecCcee
Q 044485          229 SKCVSGHNLVVDGGFA  244 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~  244 (257)
                      +.+++|+.+.+|||..
T Consensus       250 ~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          250 AKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             GTTCCSCEEEESTTGG
T ss_pred             ccCCcCCeEEECCCCC
Confidence            8999999999999975

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=9.7e-43  Score=288.44  Aligned_cols=223  Identities=27%  Similarity=0.410  Sum_probs=188.8

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++              ...+.+|++|.++++++++++
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~--------------~~~~~~Dv~~~~~~~~~~~~~   88 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA--------------DLHLPGDLREAAYADGLPGAV   88 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC--------------SEECCCCTTSHHHHHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh--------------hhccCcCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998754322              233478999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|
T Consensus        89 ~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  166 (266)
T 3uxy_A           89 AAGLGRLDIVVNNAGVISR--GRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALY  166 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHH
T ss_pred             HHhcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHH
Confidence            9999999999999998765  678899999999999999999999977763               34455667778899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc----ccCc-cccccCCCCCHHHHHHHHHHhcC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG----LGGM-YSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ++||+|++.|+++++.|++++||++|+|+||+++|++.+.........    .... ...|.+++.+|+|+|++++||++
T Consensus       167 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s  246 (266)
T 3uxy_A          167 CLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLAS  246 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999976543321110    0111 14566789999999999999999


Q ss_pred             CCCCcccccEEEecCceee
Q 044485          227 DESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~  245 (257)
                      +.+.+++|+++.+|||..+
T Consensus       247 ~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          247 DAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             GGGTTCCSCEEEESTTCCC
T ss_pred             chhcCCcCCEEEECcCEeC
Confidence            9999999999999999875

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=3.8e-42  Score=285.38  Aligned_cols=230  Identities=23%  Similarity=0.392  Sum_probs=193.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEee-CcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIAD-IKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +.+|++|||||++|||+++|++|+++|++|++++ |+.+..++..+++...+   .++.++.+|++|+++++++++++.+
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAG---RDFKAYAVDVADFESCERCAEKVLA   99 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTT---CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999998 55555666666554432   3489999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|++
T Consensus       100 ~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  177 (269)
T 3gk3_A          100 DFGKVDVLINNAGITRD--ATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYAS  177 (269)
T ss_dssp             HHSCCSEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHH
T ss_pred             HcCCCCEEEECCCcCCC--cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHH
Confidence            99999999999998765  678899999999999999999999877663               4456667788889999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      ||+|+++|+++++.|++++||++|+|+||+++|++.+........ .......+.+++.+|+|+|+.++||+++.+.+++
T Consensus       178 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~it  256 (269)
T 3gk3_A          178 AKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLE-AKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVT  256 (269)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCC
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHH-HHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCee
Confidence            999999999999999999999999999999999987654321111 0111245667889999999999999999999999


Q ss_pred             ccEEEecCceee
Q 044485          234 GHNLVVDGGFAI  245 (257)
Q Consensus       234 G~~~~~dgG~~~  245 (257)
                      |+++++|||..+
T Consensus       257 G~~i~vdgG~~~  268 (269)
T 3gk3_A          257 GADLAINGGMHM  268 (269)
T ss_dssp             SCEEEESTTSCC
T ss_pred             CcEEEECCCEeC
Confidence            999999999875

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.6e-42  Score=287.37  Aligned_cols=232  Identities=26%  Similarity=0.367  Sum_probs=194.9

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+    ++.++.+|++|+++++++++++.
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~Dv~d~~~v~~~~~~~~  100 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG----DCQAIPADLSSEAGARRLAQALG  100 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS----CEEECCCCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----ceEEEEeeCCCHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999999988888888775422    48889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------------hhccccCCCC
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------------VCGIIGGAAT  148 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------------~~~~~~~~~~  148 (257)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+..                   ..+..+.+..
T Consensus       101 ~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~  178 (276)
T 2b4q_A          101 ELSARLDILVNNAGTSWG--AALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQ  178 (276)
T ss_dssp             HHCSCCSEEEECCCCCCC--CCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCS
T ss_pred             HhcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCC
Confidence            999999999999998754  6788899999999999999999988766532                   2233445566


Q ss_pred             c-hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCC
Q 044485          149 H-AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       149 ~-~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      . .|++||+|++.|++.++.|++++||++|+|+||+++|++..................|.+++.+|+|+|+.++||+++
T Consensus       179 ~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~  258 (276)
T 2b4q_A          179 AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGT  258 (276)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSG
T ss_pred             ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCc
Confidence            6 899999999999999999999999999999999999998765322110000000023557889999999999999999


Q ss_pred             CCCcccccEEEecCceee
Q 044485          228 ESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~  245 (257)
                      .+.+++|+++.+|||..|
T Consensus       259 ~~~~~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          259 AGAYMTGNVIPIDGGFHL  276 (276)
T ss_dssp             GGTTCCSCEEEESTTTTC
T ss_pred             cccCCCCCEEEeCCCccC
Confidence            889999999999999753

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=9.8e-43  Score=285.27  Aligned_cols=228  Identities=31%  Similarity=0.520  Sum_probs=192.6

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-cchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +++|++|||||++|||++++++|+++|++|++++| +.+.++++.+++...+   .++.++.+|++|+++++++++++.+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG---SDAIAVRADVANAEDVTNMVKQTVD   78 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999 7777777777765432   2488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|++
T Consensus        79 ~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  156 (246)
T 2uvd_A           79 VFGQVDILVNNAGVTKD--NLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVA  156 (246)
T ss_dssp             HHSCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHH
Confidence            99999999999998754  567889999999999999999999876663               3344556677889999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      ||++++.|+++++.|++++||++|+|+||+++|++............  ....|.+++.+|+|+|+.++||+++.+.+++
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~t  234 (246)
T 2uvd_A          157 AKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEM--LKLIPAAQFGEAQDIANAVTFFASDQSKYIT  234 (246)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHH--HHTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHH--HhcCCCCCCcCHHHHHHHHHHHcCchhcCCC
Confidence            99999999999999999999999999999999998643211000000  0124556789999999999999999889999


Q ss_pred             ccEEEecCcee
Q 044485          234 GHNLVVDGGFA  244 (257)
Q Consensus       234 G~~~~~dgG~~  244 (257)
                      |+.+.+|||..
T Consensus       235 G~~~~vdgG~~  245 (246)
T 2uvd_A          235 GQTLNVDGGMV  245 (246)
T ss_dssp             SCEEEESTTSC
T ss_pred             CCEEEECcCcc
Confidence            99999999975

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1.7e-42  Score=289.28  Aligned_cols=232  Identities=28%  Similarity=0.377  Sum_probs=190.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..++..      .++.++.+|++|+++++++++++.+
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHG------GNAVGVVGDVRSLQDQKRAAERCLA   75 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTB------TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcC------CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988877776652      2488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCC---CCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchh
Q 044485           89 QYGKLDIMFNNAGTVDEVK---PNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAY  151 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y  151 (257)
                      .++++|+||||||+.....   ....+.+.++|++.+++|+.+++++.+.+.              |..+..+.+....|
T Consensus        76 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  155 (281)
T 3zv4_A           76 AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLY  155 (281)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSCHHH
T ss_pred             hcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCCchh
Confidence            9999999999999864321   122355678899999999999999877663              44566677778899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh-c-----cccC-c-cccccCCCCCHHHHHHHHHH
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD-D-----GLGG-M-YSNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-~-----~~~~-~-~~~~~~~~~~~~~~a~~~~~  223 (257)
                      ++||+|+++|+|+++.|++++ ||||+|+||+++|++......... .     .... + ...|.+++.+|+|+|+.++|
T Consensus       156 ~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f  234 (281)
T 3zv4_A          156 TATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVF  234 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999987 999999999999998643211000 0     0001 1 14567889999999999999


Q ss_pred             hcC-CCCCcccccEEEecCceeeee
Q 044485          224 LGS-DESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       224 l~s-~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      |++ +.+.+++|+++.+|||+.+..
T Consensus       235 L~s~~~~~~itG~~i~vdGG~~~~~  259 (281)
T 3zv4_A          235 FATRGDSLPATGALLNYDGGMGVRG  259 (281)
T ss_dssp             HHSTTTSTTCSSCEEEESSSGGGCC
T ss_pred             hhcccccccccCcEEEECCCCcccc
Confidence            999 778899999999999998764

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=3.7e-42  Score=283.73  Aligned_cols=229  Identities=28%  Similarity=0.440  Sum_probs=192.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh--hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL--GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +|++|||||++|||++++++|+++|++|++++|+.+.  +++..+++...+   .++.++.+|++|+++++++++++.+.
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAAD---QKAVFVGLDVTDKANFDSAIDEAAEK   78 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTT---CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999877  777777775432   34889999999999999999999999


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhccccCCCCchhhh
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIGGAATHAYTS  153 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~~~~~~~y~~  153 (257)
                      ++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+..                ..+..+.+....|++
T Consensus        79 ~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  156 (258)
T 3a28_C           79 LGGFDVLVNNAGIAQI--KPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYST  156 (258)
T ss_dssp             HTCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             hCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHH
Confidence            9999999999998754  6788899999999999999999998766643                233445566778999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh------h--hccccCcc-ccccCCCCCHHHHHHHHHHh
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL------A--DDGLGGMY-SNLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~------~--~~~~~~~~-~~~~~~~~~~~~~a~~~~~l  224 (257)
                      ||++++.|+++++.|++++||++|+|+||+++|++.......      .  ......+. ..|.+++.+|+|+|+.++||
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l  236 (258)
T 3a28_C          157 TKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFL  236 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Confidence            999999999999999999999999999999999987653210      0  11011111 24567889999999999999


Q ss_pred             cCCCCCcccccEEEecCceee
Q 044485          225 GSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       225 ~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      +++.+.+++|+.+.+|||..+
T Consensus       237 ~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          237 ASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             HSGGGTTCCSCEEEESSSSCC
T ss_pred             hCcccCCCCCCEEEECCCEec
Confidence            999999999999999999754

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-42  Score=284.65  Aligned_cols=231  Identities=20%  Similarity=0.307  Sum_probs=195.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEee-CcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIAD-IKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ...++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+++....   .++.++.+|++|.++++++++++
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~   85 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALG---FDFYASEGNVGDWDSTKQAFDKV   85 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTT---CCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CeeEEEecCCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999888 66666666666665443   34889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|
T Consensus        86 ~~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  163 (256)
T 3ezl_A           86 KAEVGEIDVLVNNAGITRD--VVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNY  163 (256)
T ss_dssp             HHHTCCEEEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHH
T ss_pred             HHhcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCccc
Confidence            9999999999999998765  678899999999999999999999877663               44566677788899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++||+|+++|++++++|++++||++++|+||+++|++.+.........  .....+.+++.+|+|+|+.++||+++.+.+
T Consensus       164 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  241 (256)
T 3ezl_A          164 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEK--IVATIPVRRLGSPDEIGSIVAWLASEESGF  241 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHH--HHHHSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHH--HHhcCCCCCCcCHHHHHHHHHHHhCCcccC
Confidence            999999999999999999999999999999999999876542211110  011455678899999999999999999999


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      ++|+.+.+|||..+
T Consensus       242 ~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          242 STGADFSLNGGLHM  255 (256)
T ss_dssp             CCSCEEEESTTSCC
T ss_pred             CcCcEEEECCCEeC
Confidence            99999999999875

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=2.9e-42  Score=284.68  Aligned_cols=232  Identities=30%  Similarity=0.494  Sum_probs=189.1

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh-hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +++|++|||||++|||++++++|+++|++|++++|+.+. ++++.+++....+  .++.++.+|++|+++++++++++.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~   79 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG--VKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT--SCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence            568999999999999999999999999999999999887 7777766643211  2378899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.               |..+..+.+....|++
T Consensus        80 ~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  157 (260)
T 1x1t_A           80 QMGRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVA  157 (260)
T ss_dssp             HHSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             hcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHH
Confidence            99999999999998654  567889999999999999999999877663               3445556677789999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh--------hccccCc-c-ccccCCCCCHHHHHHHHHH
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA--------DDGLGGM-Y-SNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~--------~~~~~~~-~-~~~~~~~~~~~~~a~~~~~  223 (257)
                      ||++++.|++.++.|++++||++|+|+||+++|++........        +.....+ . ..|.+++.+|+|+|+.++|
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~  237 (260)
T 1x1t_A          158 AKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVF  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999875432110        1111111 1 3456788999999999999


Q ss_pred             hcCCCCCcccccEEEecCceee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      |+++.+.+++|+.+.+|||..+
T Consensus       238 l~s~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          238 LASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhChhhcCCCCCEEEECCCccC
Confidence            9999889999999999999753

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-42  Score=287.81  Aligned_cols=237  Identities=29%  Similarity=0.383  Sum_probs=196.5

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+....++.++.+|++|+++++++++++.
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (280)
T 1xkq_A            2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   81 (280)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988888877775543211148899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCC----CCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccC-CCC
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPN----ILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGG-AAT  148 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~-~~~  148 (257)
                      +.++++|+||||||....  .+    +.+.+.++|++.+++|+.+++.+.+.+.              |..+..+. +..
T Consensus        82 ~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  159 (280)
T 1xkq_A           82 KQFGKIDVLVNNAGAAIP--DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDF  159 (280)
T ss_dssp             HHHSCCCEEEECCCCCCC--CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSS
T ss_pred             HhcCCCCEEEECCCCCCC--CCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCCcc
Confidence            999999999999998654  34    7788999999999999999999876653              23344444 667


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHh--hh----hhccccCc-cccccCCCCCHHHHHHHH
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFL--KL----ADDGLGGM-YSNLKGAVLEPEDAAEAA  221 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~--~~----~~~~~~~~-~~~~~~~~~~~~~~a~~~  221 (257)
                      ..|++||++++.|+++++.|++++||++|+|+||+++|++.....  ..    ..+..... ...|.+++.+|+|+|+.+
T Consensus       160 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v  239 (280)
T 1xkq_A          160 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANII  239 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            789999999999999999999999999999999999999876431  00    00011111 134567889999999999


Q ss_pred             HHhcCCC-CCcccccEEEecCceeee
Q 044485          222 LYLGSDE-SKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       222 ~~l~s~~-~~~~~G~~~~~dgG~~~~  246 (257)
                      +||+++. +.+++|+.+.+|||..+.
T Consensus       240 ~~l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          240 LFLADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHhcCcccccCccCCeEEECCCcccc
Confidence            9999988 889999999999998765

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=5.7e-42  Score=282.31  Aligned_cols=229  Identities=31%  Similarity=0.467  Sum_probs=192.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|+++++++++++.+.++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG---GHAVAVKVDVSDRDQVFAAVEQARKTLG   78 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999999999999999988888777775432   2488999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCchhhhhH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~y~~sK  155 (257)
                      ++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.                |..+..+.+....|++||
T Consensus        79 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  156 (256)
T 1geg_A           79 GFDVIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSK  156 (256)
T ss_dssp             CCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHH
Confidence            99999999998654  578889999999999999999998866553                233444556677899999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhh---h-----hhccccCcc-ccccCCCCCHHHHHHHHHHhcC
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLK---L-----ADDGLGGMY-SNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~---~-----~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ++++.|+++++.|++++||++|+|+||+++|++......   .     .......+. ..|.+++.+|+|+|+.++||++
T Consensus       157 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s  236 (256)
T 1geg_A          157 FAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLAS  236 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999998764321   0     000001111 2456788999999999999999


Q ss_pred             CCCCcccccEEEecCceee
Q 044485          227 DESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~  245 (257)
                      +.+.+++|+.+.+|||..+
T Consensus       237 ~~~~~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          237 PDSDYMTGQSLLIDGGMVF  255 (256)
T ss_dssp             GGGTTCCSCEEEESSSSSC
T ss_pred             ccccCCCCCEEEeCCCccC
Confidence            9999999999999999753

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-42  Score=289.92  Aligned_cols=237  Identities=27%  Similarity=0.385  Sum_probs=196.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+....++.++.+|++|+++++++++++.
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  101 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL  101 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999988888877775443211148899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCC--CCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccC-CCCch
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPN--ILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGG-AATHA  150 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~-~~~~~  150 (257)
                      +.++++|+||||||....  .+  +.+.+.++|++.+++|+.+++.+.+.+.              |..+..+. +....
T Consensus       102 ~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~~  179 (297)
T 1xhl_A          102 AKFGKIDILVNNAGANLA--DGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPY  179 (297)
T ss_dssp             HHHSCCCEEEECCCCCCC--CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHH
T ss_pred             HhcCCCCEEEECCCcCcC--CCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCCCcch
Confidence            999999999999998654  44  7889999999999999999999876663              23334444 66779


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHh--hh----hhccccCc-cccccCCCCCHHHHHHHHHH
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFL--KL----ADDGLGGM-YSNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~--~~----~~~~~~~~-~~~~~~~~~~~~~~a~~~~~  223 (257)
                      |++||+|++.|++.++.|++++||++|+|+||+++|++.....  ..    ..+..... ...|.+++.+|+|+|+.++|
T Consensus       180 Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~  259 (297)
T 1xhl_A          180 YACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVF  259 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999876431  00    00011111 13456788999999999999


Q ss_pred             hcCCC-CCcccccEEEecCceeee
Q 044485          224 LGSDE-SKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       224 l~s~~-~~~~~G~~~~~dgG~~~~  246 (257)
                      |+++. +.+++|+.+.+|||..+.
T Consensus       260 l~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          260 LADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HhCCcccCCccCcEEEECCCcccc
Confidence            99988 889999999999998764

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=7.4e-42  Score=281.35  Aligned_cols=226  Identities=38%  Similarity=0.572  Sum_probs=193.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.      .++.++.+|++|+++++++++++.+
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~   75 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG------DAARYQHLDVTIEEDWQRVVAYARE   75 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG------GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CceeEEEecCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999888777766552      2378899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|++
T Consensus        76 ~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  153 (254)
T 1hdc_A           76 EFGSVDGLVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGA  153 (254)
T ss_dssp             HHSCCCEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHH
Confidence            99999999999998654  567889999999999999999998766652               3445556677889999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCC-CHHHHHHHHHHhcCCCCCc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVL-EPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~a~~~~~l~s~~~~~  231 (257)
                      ||++++.|+++++.|++++||++|+|+||+++|++.+...   ........ ..|.+++. +|+|+|+.++||+++.+.+
T Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~  230 (254)
T 1hdc_A          154 SKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETG---IRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSY  230 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHT---CCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccc---hhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence            9999999999999999999999999999999999876531   11111111 34556788 9999999999999998899


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      ++|+.+.+|||..+
T Consensus       231 ~tG~~~~vdgG~~~  244 (254)
T 1hdc_A          231 VTGAELAVDGGWTT  244 (254)
T ss_dssp             CCSCEEEESTTTTT
T ss_pred             CCCCEEEECCCccc
Confidence            99999999999765

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.9e-43  Score=293.73  Aligned_cols=238  Identities=21%  Similarity=0.256  Sum_probs=199.2

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCC---eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGA---KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENA   82 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~---~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   82 (257)
                      |+.++++|++|||||++|||+++|++|+++|+   +|++++|+.+.++++.+++....+ +.++.++.+|++|+++++++
T Consensus        27 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~d~~~v~~~  105 (287)
T 3rku_A           27 AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFP-NAKVHVAQLDITQAEKIKPF  105 (287)
T ss_dssp             HHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCT-TCEEEEEECCTTCGGGHHHH
T ss_pred             chhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCC-CCeEEEEECCCCCHHHHHHH
Confidence            45678999999999999999999999999998   999999999998888888754321 23488999999999999999


Q ss_pred             HHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCC
Q 044485           83 VNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAA  147 (257)
Q Consensus        83 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~  147 (257)
                      ++++.+.+|++|+||||||..... .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+.
T Consensus       106 ~~~~~~~~g~iD~lVnnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~  184 (287)
T 3rku_A          106 IENLPQEFKDIDILVNNAGKALGS-DRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPT  184 (287)
T ss_dssp             HHTSCGGGCSCCEEEECCCCCCCC-CCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCC
Confidence            999999999999999999986522 578899999999999999999999977763               4556667778


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCC
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ...|++||+|+++|+++++.|++++||+||+|+||+++|++................  ......+|+|+|++++||+++
T Consensus       185 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~~p~~pedvA~~v~~l~s~  262 (287)
T 3rku_A          185 GSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVY--KDTTPLMADDVADLIVYATSR  262 (287)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHH--TTSCCEEHHHHHHHHHHHHTS
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhh--cccCCCCHHHHHHHHHHHhCC
Confidence            889999999999999999999999999999999999999986433221111110101  011244899999999999999


Q ss_pred             CCCcccccEEEecCceeeee
Q 044485          228 ESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~~~  247 (257)
                      .+.+++|+.+.+|||.....
T Consensus       263 ~~~~i~g~~i~v~~g~~~p~  282 (287)
T 3rku_A          263 KQNTVIADTLIFPTNQASPH  282 (287)
T ss_dssp             CTTEEEEEEEEEETTEEETT
T ss_pred             CCCeEecceEEeeCCCCCCc
Confidence            99999999999999987643

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=9.9e-42  Score=280.92  Aligned_cols=228  Identities=30%  Similarity=0.493  Sum_probs=191.9

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+. ++..+++.       + .++.+|++|+++++++++++.
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-------~-~~~~~D~~~~~~~~~~~~~~~   72 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-------G-AFFQVDLEDERERVRFVEEAA   72 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-------C-EEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-------C-CEEEeeCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999877 66666653       2 678999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.               |..+..+.+....|+
T Consensus        73 ~~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  150 (256)
T 2d1y_A           73 YALGRVDVLVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYN  150 (256)
T ss_dssp             HHHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHH
Confidence            999999999999998754  678889999999999999999999877663               344555667778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhh--h-hhccccCcc-ccccCCCCCHHHHHHHHHHhcCCC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLK--L-ADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~--~-~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      +||++++.|+++++.|++++||++|+|+||+++|++......  . .++....+. ..+.+++.+|+|+|+.++||+++.
T Consensus       151 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~  230 (256)
T 2d1y_A          151 ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEK  230 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999999998654310  0 111111111 345678899999999999999998


Q ss_pred             CCcccccEEEecCceeee
Q 044485          229 SKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~~  246 (257)
                      +.+++|+.+.+|||..+.
T Consensus       231 ~~~~~G~~~~v~gG~~~~  248 (256)
T 2d1y_A          231 ASFITGAILPVDGGMTAS  248 (256)
T ss_dssp             GTTCCSCEEEESTTGGGB
T ss_pred             hcCCCCCEEEECCCcccc
Confidence            889999999999998754

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=5.3e-42  Score=283.64  Aligned_cols=238  Identities=24%  Similarity=0.340  Sum_probs=188.5

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh-hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      .+++.+|++|||||++|||++++++|+++|++|++++|+.+. .+...+++....   .++.++.+|++|++++++++++
T Consensus         2 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~   78 (264)
T 3i4f_A            2 SLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVE---ERLQFVQADVTKKEDLHKIVEE   78 (264)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGG---GGEEEEECCTTSHHHHHHHHHH
T ss_pred             CcccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHHHHH
Confidence            345667999999999999999999999999999999877654 344444443322   3488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------h-hc-cccCCCC
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------V-CG-IIGGAAT  148 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------~-~~-~~~~~~~  148 (257)
                      +.+.++++|+||||||.......++.+.+.++|++.+++|+.+++.+.+.+.+               . .+ ..+.+..
T Consensus        79 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  158 (264)
T 3i4f_A           79 AMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYR  158 (264)
T ss_dssp             HHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTC
T ss_pred             HHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCC
Confidence            99999999999999995433336788999999999999999999999877631               1 11 3344556


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      ..|++||+|++.|+++++.|++++||++|+|+||+++|++.+..........  ....|.+++.+|+|+|+.++||+++.
T Consensus       159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~--~~~~p~~r~~~~~dva~~v~~l~s~~  236 (264)
T 3i4f_A          159 SAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLK--EHNTPIGRSGTGEDIARTISFLCEDD  236 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC----------CCCCHHHHHHHHHHHHSGG
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHH--hhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            7899999999999999999999999999999999999998765443222111  11456678999999999999999999


Q ss_pred             CCcccccEEEecCceeeeecc
Q 044485          229 SKCVSGHNLVVDGGFAIVNAG  249 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~~~~~  249 (257)
                      +.+++|+++.+|||.......
T Consensus       237 ~~~itG~~i~vdGG~~~~~~~  257 (264)
T 3i4f_A          237 SDMITGTIIEVTGAVDVIHRE  257 (264)
T ss_dssp             GTTCCSCEEEESCSCCCCC--
T ss_pred             cCCCCCcEEEEcCceeeccCC
Confidence            999999999999999876443

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4e-42  Score=281.51  Aligned_cols=225  Identities=32%  Similarity=0.489  Sum_probs=190.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +     +.++.+|++|+++++++++++.+
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-----~~~~~~D~~~~~~~~~~~~~~~~   73 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G-----AHPVVMDVADPASVERGFAEALA   73 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T-----CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C-----CEEEEecCCCHHHHHHHHHHHHH
Confidence            567899999999999999999999999999999999988777666544   1     67899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh--------------hccccCCCCchhhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV--------------CGIIGGAATHAYTSS  154 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~--------------~~~~~~~~~~~y~~s  154 (257)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+...              ....+.+....|+++
T Consensus        74 ~~g~id~lvn~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~Y~as  151 (245)
T 1uls_A           74 HLGRLDGVVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAAS  151 (245)
T ss_dssp             HHSSCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCHHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCCCchhHHHH
Confidence            99999999999998754  67888999999999999999999987766321              124566677899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      |++++.|+++++.|++++||++|+|+||+++|++............  ....|.+++.+|+|+|+.++||+++.+.+++|
T Consensus       152 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~--~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG  229 (245)
T 1uls_A          152 MAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKA--IAATPLGRAGKPLEVAYAALFLLSDESSFITG  229 (245)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHH--HHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHH--HhhCCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence            9999999999999999999999999999999998653211100000  01235567899999999999999998899999


Q ss_pred             cEEEecCceee
Q 044485          235 HNLVVDGGFAI  245 (257)
Q Consensus       235 ~~~~~dgG~~~  245 (257)
                      +.+.+|||..+
T Consensus       230 ~~~~vdgG~~~  240 (245)
T 1uls_A          230 QVLFVDGGRTI  240 (245)
T ss_dssp             CEEEESTTTTT
T ss_pred             CEEEECCCccc
Confidence            99999999764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-42  Score=284.97  Aligned_cols=230  Identities=32%  Similarity=0.604  Sum_probs=193.9

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.       ++.++.+|++|+++++++++++.
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~Dv~d~~~v~~~~~~~~   77 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-------GAVFILCDVTQEDDVKTLVSETI   77 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-------TEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-------CCeEEEcCCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999888777766653       27889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~~  153 (257)
                      +.++++|+||||||..... .++.+.+.++|++.+++|+.+++.+.+.+.              |..+..+.+....|++
T Consensus        78 ~~~g~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  156 (270)
T 1yde_A           78 RRFGRLDCVVNNAGHHPPP-QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVA  156 (270)
T ss_dssp             HHHSCCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHH
Confidence            9999999999999986432 567889999999999999999999876663              3344556677889999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc---c-cCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG---L-GGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      +|++++.|+++++.|++++||++|+|+||+++|++...........   . ......|.+++.+|+|+|+.++||+++ +
T Consensus       157 sKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~-~  235 (270)
T 1yde_A          157 TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-A  235 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-C
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc-C
Confidence            9999999999999999999999999999999999876432111100   0 001135667889999999999999998 7


Q ss_pred             CcccccEEEecCceeee
Q 044485          230 KCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~~  246 (257)
                      .+++|+.+.+|||..+.
T Consensus       236 ~~itG~~i~vdGG~~~~  252 (270)
T 1yde_A          236 NFCTGIELLVTGGAELG  252 (270)
T ss_dssp             TTCCSCEEEESTTTTSC
T ss_pred             CCcCCCEEEECCCeecc
Confidence            89999999999997653

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=2.6e-42  Score=284.99  Aligned_cols=233  Identities=22%  Similarity=0.304  Sum_probs=192.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++....+ ..++.++.+|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~   81 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVS-GAQVDIVAGDIREPGDIDRLFEKAR   81 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST-TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999888877777643210 1248899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++ +|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|+
T Consensus        82 ~~~g-id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  158 (260)
T 2z1n_A           82 DLGG-ADILVYSTGGPRP--GRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSN  158 (260)
T ss_dssp             HTTC-CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             HhcC-CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhH
Confidence            9998 9999999997654  567889999999999999999999877663               344455667778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHh-------hhhhcc-ccCcc-ccccCCCCCHHHHHHHHHH
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFL-------KLADDG-LGGMY-SNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~-------~~~~~~-~~~~~-~~~~~~~~~~~~~a~~~~~  223 (257)
                      +||++++.|++.++.|++++||++|+|+||+++|++.....       ...... ...+. ..|.+++.+|+|+|+.++|
T Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~  238 (260)
T 2z1n_A          159 IMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAF  238 (260)
T ss_dssp             HHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Confidence            99999999999999999999999999999999999865210       001110 11111 3466788999999999999


Q ss_pred             hcCCCCCcccccEEEecCcee
Q 044485          224 LGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~  244 (257)
                      |+++.+.+++|+.+.+|||..
T Consensus       239 l~s~~~~~~tG~~i~vdGG~~  259 (260)
T 2z1n_A          239 LASEKASFITGAVIPVDGGAH  259 (260)
T ss_dssp             HTSGGGTTCCSCEEEESTTTT
T ss_pred             HhCccccCCCCCEEEeCCCcc
Confidence            999998999999999999964

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=3.6e-42  Score=287.78  Aligned_cols=224  Identities=23%  Similarity=0.298  Sum_probs=192.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch-------hhHhHHHHhccCCCCCCCceeEecCCCCHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD-------LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIE   80 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-------~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~   80 (257)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+       .+++..+++...+   .++.++++|++|+++++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~   81 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG---GQALPIVGDIRDGDAVA   81 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT---SEEEEEECCTTSHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHH
Confidence            4688999999999999999999999999999999999976       3445555554432   34889999999999999


Q ss_pred             HHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh---------------hccccC
Q 044485           81 NAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV---------------CGIIGG  145 (257)
Q Consensus        81 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~---------------~~~~~~  145 (257)
                      ++++++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+.+.               .+..+.
T Consensus        82 ~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  159 (285)
T 3sc4_A           82 AAVAKTVEQFGGIDICVNNASAINL--GSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK  159 (285)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCC--CCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC
Confidence            9999999999999999999998765  67899999999999999999999998877433               233333


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCC-CccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHH
Q 044485          146 -AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPY-AVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       146 -~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  223 (257)
                       +....|++||+|+++|+++++.|++++||+||+|+|| .++|++.+.....         ..+.+++.+|+|+|+.++|
T Consensus       160 ~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~---------~~~~~r~~~pedvA~~~~~  230 (285)
T 3sc4_A          160 WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG---------DEAMARSRKPEVYADAAYV  230 (285)
T ss_dssp             GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTS---------CCCCTTCBCTHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccc---------cccccCCCCHHHHHHHHHH
Confidence             5567899999999999999999999999999999999 6999987765321         2245678899999999999


Q ss_pred             hcCCCCCcccccEEEecCceeee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      |+++.+ +++|+.+.+|||....
T Consensus       231 l~s~~~-~~tG~~i~~dgg~~~~  252 (285)
T 3sc4_A          231 VLNKPS-SYTGNTLLCEDVLLES  252 (285)
T ss_dssp             HHTSCT-TCCSCEEEHHHHHHHH
T ss_pred             HhCCcc-cccceEEEEcCchhcc
Confidence            999988 9999999999987654

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=1.7e-41  Score=280.15  Aligned_cols=226  Identities=41%  Similarity=0.683  Sum_probs=193.9

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++..      ++.++.+|++|++++++++++
T Consensus         1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~   74 (260)
T 1nff_A            1 MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD------AARYVHLDVTQPAQWKAAVDT   74 (260)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG------GEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc------CceEEEecCCCHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999888777766642      278899999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~  150 (257)
                      +.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.               |..+..+.+....
T Consensus        75 ~~~~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  152 (260)
T 1nff_A           75 AVTAFGGLHVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHG  152 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHH
T ss_pred             HHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchh
Confidence            99999999999999998754  578889999999999999999998876653               3344556667779


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      |++||++++.|+++++.|++++||++|+|+||+++|++.. . .  ...   +...+.+++.+|+|+|+.++||+++.+.
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~-~--~~~---~~~~~~~~~~~~~dvA~~v~~l~s~~~~  225 (260)
T 1nff_A          153 YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W-V--PED---IFQTALGRAAEPVEVSNLVVYLASDESS  225 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-S--CTT---CSCCSSSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c-c--hhh---HHhCccCCCCCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999999999864 1 1  111   1134557788999999999999999888


Q ss_pred             cccccEEEecCceeee
Q 044485          231 CVSGHNLVVDGGFAIV  246 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~  246 (257)
                      +++|+.+.+|||..+.
T Consensus       226 ~~~G~~~~v~gG~~~~  241 (260)
T 1nff_A          226 YSTGAEFVVDGGTVAG  241 (260)
T ss_dssp             TCCSCEEEESTTGGGS
T ss_pred             CCcCCEEEECCCeecc
Confidence            9999999999998664

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=5.1e-42  Score=284.59  Aligned_cols=234  Identities=20%  Similarity=0.205  Sum_probs=191.1

Q ss_pred             cccccCCcEEEEecC--CCchHHHHHHHHHHcCCeEEEeeCcchh-hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHH
Q 044485            6 MLRRLQGKVALITGG--ARGIGECTARLFSKHGAKVLIADIKDDL-GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENA   82 (257)
Q Consensus         6 ~~~~~~~k~~lItGa--s~giG~~ia~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   82 (257)
                      ||.++++|++|||||  ++|||++++++|+++|++|++++|+.+. ++++.+++.      .++.++.+|++|+++++++
T Consensus         1 Mm~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~   74 (269)
T 2h7i_A            1 MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP------AKAPLLELDVQNEEHLASL   74 (269)
T ss_dssp             -CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSS------SCCCEEECCTTCHHHHHHH
T ss_pred             CccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcC------CCceEEEccCCCHHHHHHH
Confidence            455789999999999  9999999999999999999999998765 355544431      2378899999999999999


Q ss_pred             HHHHHHHcC---CccEEEeCCCCCCCC---CCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh------------cccc
Q 044485           83 VNTAVTQYG---KLDIMFNNAGTVDEV---KPNILDNDQAEFERILSINLVGAFLGRNMLLGVC------------GIIG  144 (257)
Q Consensus        83 ~~~~~~~~~---~id~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~------------~~~~  144 (257)
                      ++++.+.+|   ++|+||||||.....   ..++.+.+.++|++.+++|+.+++.+.+.+.+..            +..+
T Consensus        75 ~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~  154 (269)
T 2h7i_A           75 AGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA  154 (269)
T ss_dssp             HHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC
T ss_pred             HHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc
Confidence            999999999   999999999986421   2567889999999999999999999988875321            1234


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh--hh-------ccccCc-cccccC-CCCC
Q 044485          145 GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL--AD-------DGLGGM-YSNLKG-AVLE  213 (257)
Q Consensus       145 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~--~~-------~~~~~~-~~~~~~-~~~~  213 (257)
                      .+....|++||+|+++|+++++.|++++||+||+|+||+++|++.+.....  .+       ...... ...|.+ ++.+
T Consensus       155 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~  234 (269)
T 2h7i_A          155 MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKD  234 (269)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTC
T ss_pred             cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCC
Confidence            456678999999999999999999999999999999999999986543210  00       000011 134566 6899


Q ss_pred             HHHHHHHHHHhcCCCCCcccccEEEecCceee
Q 044485          214 PEDAAEAALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       214 ~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      |+|+|+.++||+++.+.+++|+.+.+|||+.+
T Consensus       235 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          235 ATPVAKTVCALLSDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             CHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             HHHHHHHHHHHhCchhccCcceEEEecCCeee
Confidence            99999999999999999999999999999764

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=5.5e-42  Score=283.01  Aligned_cols=233  Identities=30%  Similarity=0.395  Sum_probs=195.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+   .++.++.+|++|+++++++++++.
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   86 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG---LSVTGTVCHVGKAEDRERLVAMAV   86 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988887777765432   248889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|+||||||.... ..++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|+
T Consensus        87 ~~~g~iD~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  165 (260)
T 2zat_A           87 NLHGGVDILVSNAAVNPF-FGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYN  165 (260)
T ss_dssp             HHHSCCCEEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             HHcCCCCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHH
Confidence            999999999999997532 1467788999999999999999999877663               334445566778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++|++++.|++.++.|++++||++|+|+||+++|++......... ..... ...+.+++.+|+|+|+.++||+++.+.+
T Consensus       166 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~  244 (260)
T 2zat_A          166 VSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKA-RKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASY  244 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHH-HHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChH-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCC
Confidence            999999999999999999999999999999999998654321100 00001 1245577899999999999999999899


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      ++|+.+.+|||..+
T Consensus       245 ~tG~~~~vdgG~~~  258 (260)
T 2zat_A          245 ITGETVVVGGGTAS  258 (260)
T ss_dssp             CCSCEEEESTTCCC
T ss_pred             ccCCEEEECCCccc
Confidence            99999999999765

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.1e-41  Score=283.81  Aligned_cols=232  Identities=28%  Similarity=0.433  Sum_probs=195.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|+++++++++++.+
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG---VEADGRTCDVRSVPEIEALVAAVVE   95 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEECCCCCHHHHHHHHHHHHH
Confidence            6889999999999999999999999999999999999988888777775432   2488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-----------------hhccccCCCCchh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-----------------VCGIIGGAATHAY  151 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-----------------~~~~~~~~~~~~y  151 (257)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+..                 ..+..+.+....|
T Consensus        96 ~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  173 (277)
T 2rhc_B           96 RYGPVDVLVNNAGRPGG--GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPY  173 (277)
T ss_dssp             HTCSCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHH
T ss_pred             HhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccH
Confidence            99999999999998654  5678899999999999999999998776543                 2344455667789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh--h------hccccCcc-ccccCCCCCHHHHHHHHH
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL--A------DDGLGGMY-SNLKGAVLEPEDAAEAAL  222 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~--~------~~~~~~~~-~~~~~~~~~~~~~a~~~~  222 (257)
                      +++|++++.|+++++.|++++||++|+|+||+++|++.......  .      ++....+. ..|.+++.+|+|+|++++
T Consensus       174 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~  253 (277)
T 2rhc_B          174 SASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVA  253 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999987643210  0      11011111 345678899999999999


Q ss_pred             HhcCCCCCcccccEEEecCceee
Q 044485          223 YLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       223 ~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ||+++.+.+++|+++.+|||...
T Consensus       254 ~l~s~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          254 YLIGPGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             HHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHhCchhcCCCCcEEEECCCccc
Confidence            99999889999999999999753

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-42  Score=283.59  Aligned_cols=239  Identities=21%  Similarity=0.201  Sum_probs=191.0

Q ss_pred             ccccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         7 ~~~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      ..++++|++|||||+  +|||+++|++|+++|++|++++|+....+...+..... +   ++.++.+|++|+++++++++
T Consensus         9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~---~~~~~~~Dv~~~~~v~~~~~   84 (271)
T 3ek2_A            9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF-G---SELVFPCDVADDAQIDALFA   84 (271)
T ss_dssp             CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT-T---CCCEEECCTTCHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc-C---CcEEEECCCCCHHHHHHHHH
Confidence            457899999999999  99999999999999999999999865443333322222 1   27899999999999999999


Q ss_pred             HHHHHcCCccEEEeCCCCCCCC--CCCCCC-CCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCC
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEV--KPNILD-NDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAAT  148 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~  148 (257)
                      ++.+.++++|+||||||+....  ..++.+ .+.++|++.+++|+.+++.+.+.+.             |..+..+.+..
T Consensus        85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~  164 (271)
T 3ek2_A           85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNY  164 (271)
T ss_dssp             HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT
T ss_pred             HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCc
Confidence            9999999999999999986531  023444 8999999999999999999988773             44556667788


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++..................+.+++.+|+|+|+.++||+++.
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~  244 (271)
T 3ek2_A          165 NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDL  244 (271)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcc
Confidence            89999999999999999999999999999999999999987543221111111111455678899999999999999999


Q ss_pred             CCcccccEEEecCceeeeecc
Q 044485          229 SKCVSGHNLVVDGGFAIVNAG  249 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~~~~~  249 (257)
                      +.+++|+++.+|||..+....
T Consensus       245 ~~~~tG~~i~vdgG~~~~~~~  265 (271)
T 3ek2_A          245 ASGVTAEVMHVDSGFNAVVGG  265 (271)
T ss_dssp             GTTCCSEEEEESTTGGGBCCC
T ss_pred             cCCeeeeEEEECCCeeeehhh
Confidence            999999999999999887544

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.5e-42  Score=283.85  Aligned_cols=234  Identities=26%  Similarity=0.401  Sum_probs=168.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|+++++++++++.
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG---GTAISVAVDVSDPESAKAMADRTL   81 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999999888888876543   348899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCC-CCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh------------ccccCCCCchhhhh
Q 044485           88 TQYGKLDIMFNNAGTVDE-VKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC------------GIIGGAATHAYTSS  154 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~------------~~~~~~~~~~y~~s  154 (257)
                      +.++++|+||||||.... ...++.+.+.++|++.+++|+.+++++.+.+....            +..+.+....|++|
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~Y~as  161 (253)
T 3qiv_A           82 AEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNYYGLA  161 (253)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------CC
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCCchhHHH
Confidence            999999999999998431 12467789999999999999999999887774322            22233556789999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      |+|+++|+++++.|++++||++++|+||+++|++.+....  ........ ..+.+++.+|+|+|+.++||+++...+++
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~t  239 (253)
T 3qiv_A          162 KVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTP--KEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWIT  239 (253)
T ss_dssp             HHHHHHHHHHHHHHTTTTTEEEEEEEC---------------------------------CCHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCc--HHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccCCC
Confidence            9999999999999999999999999999999998764322  11111111 45567788999999999999999999999


Q ss_pred             ccEEEecCceeee
Q 044485          234 GHNLVVDGGFAIV  246 (257)
Q Consensus       234 G~~~~~dgG~~~~  246 (257)
                      |+++++|||..+.
T Consensus       240 G~~~~vdgG~~~~  252 (253)
T 3qiv_A          240 GQIFNVDGGQIIR  252 (253)
T ss_dssp             SCEEEC-------
T ss_pred             CCEEEECCCeecC
Confidence            9999999998764

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=5e-42  Score=287.73  Aligned_cols=230  Identities=20%  Similarity=0.275  Sum_probs=190.2

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEee-CcchhhHhHHHHhc-cCCCCCCCceeEecCCCCHH-------
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIAD-IKDDLGESVCKDIG-SSSSSASGCSYVHCDVTKEK-------   77 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~-~~~~~~~~v~~~~~D~~~~~-------   77 (257)
                      |+++++|++|||||++|||++++++|+++|++|++++ |+.+.++++.+++. ..+   .++.++.+|++|++       
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dl~~~~~~~~~~~   80 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP---NSAITVQADLSNVATAPVSGA   80 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST---TCEEEEECCCSSSCBCCCC--
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC---CeeEEEEeecCCccccccccc
Confidence            4578999999999999999999999999999999999 99888888877775 222   24889999999999       


Q ss_pred             ----------HHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCC--------------HHHHHHHHhhhchhhhHHH
Q 044485           78 ----------DIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDND--------------QAEFERILSINLVGAFLGR  133 (257)
Q Consensus        78 ----------~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~  133 (257)
                                +++++++++.+.++++|+||||||+...  .++.+.+              .++|++.+++|+.+++.+.
T Consensus        81 ~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  158 (291)
T 1e7w_A           81 DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLI  158 (291)
T ss_dssp             --CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHH
T ss_pred             ccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHH
Confidence                      9999999999999999999999998754  5677888              9999999999999999997


Q ss_pred             HHHHhh---------------------hccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH
Q 044485          134 NMLLGV---------------------CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF  192 (257)
Q Consensus       134 ~~~~s~---------------------~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~  192 (257)
                      +.+.+.                     .+..+.+....|++||+++++|+++++.|++++||+||+|+||+++|++ + .
T Consensus       159 ~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~  236 (291)
T 1e7w_A          159 KAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M  236 (291)
T ss_dssp             HHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S
T ss_pred             HHHHHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C
Confidence            776532                     2233455667899999999999999999999999999999999999998 3 2


Q ss_pred             hhhhhccccCcc-ccccC-CCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          193 LKLADDGLGGMY-SNLKG-AVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       193 ~~~~~~~~~~~~-~~~~~-~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                       .  +.....+. ..|.+ ++.+|+|+|+.++||+++.+.+++|+++.+|||+.+.
T Consensus       237 -~--~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  289 (291)
T 1e7w_A          237 -P--PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  289 (291)
T ss_dssp             -C--HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             -C--HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence             1  11111111 24556 7889999999999999999999999999999998754

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.5e-41  Score=280.83  Aligned_cols=230  Identities=30%  Similarity=0.482  Sum_probs=192.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++..      ++.++.+|++|+++++++++++.
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~d~~~v~~~~~~~~   81 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN------GGFAVEVDVTKRASVDAAMQKAI   81 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT------CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc------CCeEEEEeCCCHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999998877777665532      37889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhccccCCCCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~~~~~~~y  151 (257)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+..                ..+..+.+....|
T Consensus        82 ~~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  159 (263)
T 3ak4_A           82 DALGGFDLLCANAGVSTM--RPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHY  159 (263)
T ss_dssp             HHHTCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhH
Confidence            999999999999998754  5678899999999999999999998766532                2333455667789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhh----hh----hccccCcc-ccccCCCCCHHHHHHHHH
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLK----LA----DDGLGGMY-SNLKGAVLEPEDAAEAAL  222 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~----~~----~~~~~~~~-~~~~~~~~~~~~~a~~~~  222 (257)
                      ++||++++.|+++++.|++++||++|+|+||+++|++......    ..    +.....+. ..|.+++.+|+|+|+.++
T Consensus       160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~  239 (263)
T 3ak4_A          160 SASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVV  239 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999998754321    00    11101111 345678899999999999


Q ss_pred             HhcCCCCCcccccEEEecCceee
Q 044485          223 YLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       223 ~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ||+++.+.+++|+.+++|||..+
T Consensus       240 ~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          240 FLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             HHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHhCccccCCCCCEEEECcCEeC
Confidence            99999888999999999999754

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=6.1e-42  Score=285.74  Aligned_cols=234  Identities=18%  Similarity=0.187  Sum_probs=192.2

Q ss_pred             cccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         8 ~~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      .++++|++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++....+   ++.++.+|++|++++++++++
T Consensus        22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~---~~~~~~~Dl~~~~~v~~~~~~   96 (280)
T 3nrc_A           22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN---PAAVLPCDVISDQEIKDLFVE   96 (280)
T ss_dssp             CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGC---CSEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcC---CceEEEeecCCHHHHHHHHHH
Confidence            46889999999998  7799999999999999999999987  3333344332222   378999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCC--CCCCCC-CCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCC
Q 044485           86 AVTQYGKLDIMFNNAGTVDEV--KPNILD-NDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAAT  148 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~  148 (257)
                      +.+.++++|+||||||.....  ..++.+ .+.++|++.+++|+.+++.+.+.+.              |..+..+.+..
T Consensus        97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  176 (280)
T 3nrc_A           97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSY  176 (280)
T ss_dssp             HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTT
T ss_pred             HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCc
Confidence            999999999999999986431  123444 8999999999999999999977663              34455667778


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      ..|++||+|++.|+++++.|++++||++++|+||+++|++..................+.+++.+|+|+|+.++||+++.
T Consensus       177 ~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~  256 (280)
T 3nrc_A          177 NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDM  256 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGG
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            89999999999999999999999999999999999999987654321111111111455678899999999999999999


Q ss_pred             CCcccccEEEecCceeee
Q 044485          229 SKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~~  246 (257)
                      +.+++|+++.+|||..+.
T Consensus       257 ~~~~tG~~i~vdgG~~~~  274 (280)
T 3nrc_A          257 ATGITGEVVHVDAGYHCV  274 (280)
T ss_dssp             GTTCCSCEEEESTTGGGC
T ss_pred             cCCcCCcEEEECCCcccc
Confidence            999999999999999875

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=8.2e-42  Score=283.06  Aligned_cols=230  Identities=20%  Similarity=0.316  Sum_probs=193.2

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEE-eeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~-~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      ++.++.+|++|||||++|||+++|++|+++|++|++ ..|+.+..++..+++...+   .++.++.+|++|+++++++++
T Consensus        20 ~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~   96 (267)
T 4iiu_A           20 FQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANG---GNGRLLSFDVANREQCREVLE   96 (267)
T ss_dssp             -----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHH
T ss_pred             hccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHHHH
Confidence            345688999999999999999999999999999866 4567777777777775543   348899999999999999999


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------------HhhhccccCCCC
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------------LGVCGIIGGAAT  148 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------------~s~~~~~~~~~~  148 (257)
                      ++.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+                +|..+..+.+..
T Consensus        97 ~~~~~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  174 (267)
T 4iiu_A           97 HEIAQHGAWYGVVSNAGIARD--AAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQ  174 (267)
T ss_dssp             HHHHHHCCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTC
T ss_pred             HHHHHhCCccEEEECCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCC
Confidence            999999999999999998765  67888999999999999999999886654                244566677888


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      ..|++||+|++.|++.++.|++++||++++|+||+++|++...........   ....+.+++.+|+|+|++++||+++.
T Consensus       175 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~---~~~~p~~~~~~~edva~~~~~L~s~~  251 (267)
T 4iiu_A          175 VNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEA---MSMIPMKRMGQAEEVAGLASYLMSDI  251 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHH---HHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHH---HhcCCCCCCcCHHHHHHHHHHHhCCc
Confidence            999999999999999999999999999999999999999875432111111   11345677899999999999999999


Q ss_pred             CCcccccEEEecCce
Q 044485          229 SKCVSGHNLVVDGGF  243 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~  243 (257)
                      +.+++|+++.+|||.
T Consensus       252 ~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          252 AGYVTRQVISINGGM  266 (267)
T ss_dssp             GTTCCSCEEEESTTC
T ss_pred             ccCccCCEEEeCCCc
Confidence            999999999999996

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=9.8e-42  Score=281.49  Aligned_cols=222  Identities=21%  Similarity=0.243  Sum_probs=179.3

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+.+.+..++..        +.++.+|++|+++++++++++
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~Dv~~~~~v~~~~~~~   93 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG--------AVALYGDFSCETGIMAFIDLL   93 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHT--------CEEEECCTTSHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcC--------CeEEECCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999876554444431        688999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||....  .. .+.+.++|++.+++|+.+++++.+.+.               |..+..+.+....|
T Consensus        94 ~~~~g~iD~lv~nAg~~~~--~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  170 (260)
T 3gem_A           94 KTQTSSLRAVVHNASEWLA--ET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAY  170 (260)
T ss_dssp             HHHCSCCSEEEECCCCCCC--CC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHH
T ss_pred             HHhcCCCCEEEECCCccCC--CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhH
Confidence            9999999999999998754  22 567889999999999999999877663               44566677778899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++||+|+++|+++++.|+++ +|+||+|+||+++|++.....    .........+.+++.+|+|+|++++||+  .+.+
T Consensus       171 ~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~~----~~~~~~~~~p~~r~~~~edva~~v~~L~--~~~~  243 (260)
T 3gem_A          171 CATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDAA----YRANALAKSALGIEPGAEVIYQSLRYLL--DSTY  243 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC-------------------CCSCCCCCTHHHHHHHHHHH--HCSS
T ss_pred             HHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCHH----HHHHHHhcCCCCCCCCHHHHHHHHHHHh--hCCC
Confidence            99999999999999999998 799999999999998753211    0111112456678899999999999999  4678


Q ss_pred             ccccEEEecCceeee
Q 044485          232 VSGHNLVVDGGFAIV  246 (257)
Q Consensus       232 ~~G~~~~~dgG~~~~  246 (257)
                      ++|+++.+|||..+.
T Consensus       244 itG~~i~vdGG~~~~  258 (260)
T 3gem_A          244 VTGTTLTVNGGRHVK  258 (260)
T ss_dssp             CCSCEEEESTTTTTC
T ss_pred             CCCCEEEECCCcccC
Confidence            999999999998765

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.4e-41  Score=279.77  Aligned_cols=229  Identities=28%  Similarity=0.452  Sum_probs=190.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +++|++|||||++|||++++++|+++|++|++++|+.+  ++..+++...+   .++.++.+|++|+++++++++++.+.
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~   76 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHG---VKAVHHPADLSDVAQIEALFALAERE   76 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTS---CCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcC---CceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999876  44555554332   34788999999999999999999999


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhh
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSS  154 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~s  154 (257)
                      ++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|+++
T Consensus        77 ~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  154 (255)
T 2q2v_A           77 FGGVDILVNNAGIQHV--APVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAA  154 (255)
T ss_dssp             HSSCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHH
Confidence            9999999999998654  567888999999999999999999877663               34455566677899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc---c----cCc--cccccCCCCCHHHHHHHHHHhc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG---L----GGM--YSNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~---~----~~~--~~~~~~~~~~~~~~a~~~~~l~  225 (257)
                      |++++.|+++++.|++++||++|+|+||+++|++...........   .    ..+  ...|.+++.+|+|+|+.++||+
T Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~  234 (255)
T 2q2v_A          155 KHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLC  234 (255)
T ss_dssp             HHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999876432100000   0    111  1345678899999999999999


Q ss_pred             CCCCCcccccEEEecCceee
Q 044485          226 SDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       226 s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ++.+.+++|+.+.+|||..+
T Consensus       235 s~~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          235 SEAGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CCccCCCCCCEEEECCCccC
Confidence            99888999999999999753

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=1.7e-41  Score=283.45  Aligned_cols=232  Identities=28%  Similarity=0.404  Sum_probs=192.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh-hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+. .+++.+++...+   .++.++.+|++|+++++++++++
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~  101 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG---SDAACVKANVGVVEDIVRMFEEA  101 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC---CCeEEEEcCCCCHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998754 455555554432   24889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhccccCCC-Cchhh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCGIIGGAA-THAYT  152 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~~~~~~-~~~y~  152 (257)
                      .+.++++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+..             ..+..+.+. ...|+
T Consensus       102 ~~~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~  179 (283)
T 1g0o_A          102 VKIFGKLDIVCSNSGVVSF--GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYS  179 (283)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHH
T ss_pred             HHHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchH
Confidence            9999999999999998754  6688899999999999999999999877743             233344443 67899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh--------hccccCcc---ccccCCCCCHHHHHHHH
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA--------DDGLGGMY---SNLKGAVLEPEDAAEAA  221 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~--------~~~~~~~~---~~~~~~~~~~~~~a~~~  221 (257)
                      +||++++.|+++++.|++++||++|+|+||+++|++........        ++....+.   ..+.+++.+|+|+|+.+
T Consensus       180 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  259 (283)
T 1g0o_A          180 GSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVV  259 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999876542110        00001111   24567889999999999


Q ss_pred             HHhcCCCCCcccccEEEecCcee
Q 044485          222 LYLGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       222 ~~l~s~~~~~~~G~~~~~dgG~~  244 (257)
                      +||+++.+.+++|+.+.+|||..
T Consensus       260 ~~l~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          260 CFLASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHhCccccCcCCCEEEeCCCcc
Confidence            99999999999999999999975

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=5.5e-42  Score=291.44  Aligned_cols=234  Identities=27%  Similarity=0.485  Sum_probs=195.7

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc----------chhhHhHHHHhccCCCCCCCceeEecCCCC
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK----------DDLGESVCKDIGSSSSSASGCSYVHCDVTK   75 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~----------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~   75 (257)
                      ||.++++|++|||||++|||+++|++|+++|++|++++|+          .+.+++..+++...+   .++.++.+|++|
T Consensus        21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d   97 (322)
T 3qlj_A           21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG---GEAVADGSNVAD   97 (322)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT---CEEEEECCCTTS
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcC---CcEEEEECCCCC
Confidence            4567899999999999999999999999999999999987          566777777776543   348899999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH------------------
Q 044485           76 EKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL------------------  137 (257)
Q Consensus        76 ~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~------------------  137 (257)
                      +++++++++++.+.+|++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.                  
T Consensus        98 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV  175 (322)
T 3qlj_A           98 WDQAAGLIQTAVETFGGLDVLVNNAGIVRD--RMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRII  175 (322)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEECCCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEE
Confidence            999999999999999999999999998765  678899999999999999999998866542                  


Q ss_pred             ---hhhccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCH
Q 044485          138 ---GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEP  214 (257)
Q Consensus       138 ---s~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (257)
                         |..+..+.+....|++||+|+++|+++++.|++++||+||+|+|| +.|++.........   .  ......+..+|
T Consensus       176 ~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~---~--~~~~~~~~~~p  249 (322)
T 3qlj_A          176 NTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM---A--TQDQDFDAMAP  249 (322)
T ss_dssp             EECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------------CCTTCG
T ss_pred             EEcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh---h--ccccccCCCCH
Confidence               334555667788999999999999999999999999999999999 89988654321100   0  01112245789


Q ss_pred             HHHHHHHHHhcCCCCCcccccEEEecCceeeeecce
Q 044485          215 EDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGF  250 (257)
Q Consensus       215 ~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~~~~  250 (257)
                      +|+|++++||+++.+.+++|+++.+|||.......|
T Consensus       250 edva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~  285 (322)
T 3qlj_A          250 ENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGW  285 (322)
T ss_dssp             GGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECC
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEECCCccccCCCc
Confidence            999999999999999999999999999998865444

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=3.7e-42  Score=283.02  Aligned_cols=231  Identities=27%  Similarity=0.347  Sum_probs=194.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEe-eCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +++|++|||||++|||++++++|+++|++|+++ .|+.+.+++..+++...+   .++.++.+|++|.++++++++++.+
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   81 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG---GSAFSIGANLESLHGVEALYSSLDN   81 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTT---CEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcC---CceEEEecCcCCHHHHHHHHHHHHH
Confidence            678999999999999999999999999998885 677777777777776543   3488999999999999999999987


Q ss_pred             HcC------CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCc
Q 044485           89 QYG------KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATH  149 (257)
Q Consensus        89 ~~~------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~  149 (257)
                      .++      ++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.             |..+..+.+...
T Consensus        82 ~~~~~~~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  159 (255)
T 3icc_A           82 ELQNRTGSTKFDILINNAGIGPG--AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFI  159 (255)
T ss_dssp             HHHHHHSSSCEEEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBH
T ss_pred             HhcccccCCcccEEEECCCCCCC--CChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcc
Confidence            764      49999999998654  678889999999999999999999988773             455666778888


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      .|++||+|+++|+++++.|++++||++|+|+||+++|++.+................+.+++.+|+|+|+.++||+++.+
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  239 (255)
T 3icc_A          160 AYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDS  239 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             hhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999999876543221100001113456788999999999999999999


Q ss_pred             CcccccEEEecCceee
Q 044485          230 KCVSGHNLVVDGGFAI  245 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~  245 (257)
                      .+++|+++.+|||..|
T Consensus       240 ~~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          240 RWVTGQLIDVSGGSCL  255 (255)
T ss_dssp             TTCCSCEEEESSSTTC
T ss_pred             CCccCCEEEecCCeeC
Confidence            9999999999999754

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=1.5e-41  Score=280.64  Aligned_cols=237  Identities=19%  Similarity=0.239  Sum_probs=192.3

Q ss_pred             cccccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         6 ~~~~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      |..++++|++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++....+   .+.++.+|++|++++++++
T Consensus         2 ~~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~   77 (261)
T 2wyu_A            2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG---GALLFRADVTQDEELDALF   77 (261)
T ss_dssp             EEECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT---CCEEEECCTTCHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC---CcEEEECCCCCHHHHHHHH
Confidence            3446889999999999  99999999999999999999999875 3334444432211   2688999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEV--KPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAAT  148 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~  148 (257)
                      +++.+.++++|+||||||.....  ..++.+.+.++|++.+++|+.+++++.+.+.             |..+..+.+..
T Consensus        78 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~  157 (261)
T 2wyu_A           78 AGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKY  157 (261)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTC
T ss_pred             HHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCc
Confidence            99999999999999999976420  1457788999999999999999999987774             33445556677


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ..|++||+|++.|+++++.|++++||++|+|+||+++|++........ .....+. ..|.+++.+|+|+|+.++||+++
T Consensus       158 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~  236 (261)
T 2wyu_A          158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFT-KMYDRVAQTAPLRRNITQEEVGNLGLFLLSP  236 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHH-HHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccH-HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCh
Confidence            789999999999999999999999999999999999999865321110 0001111 34567889999999999999999


Q ss_pred             CCCcccccEEEecCceeeee
Q 044485          228 ESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~~~  247 (257)
                      .+.+++|+.+.+|||..+..
T Consensus       237 ~~~~~tG~~~~vdgG~~~~~  256 (261)
T 2wyu_A          237 LASGITGEVVYVDAGYHIMG  256 (261)
T ss_dssp             GGTTCCSCEEEESTTGGGBC
T ss_pred             hhcCCCCCEEEECCCccccC
Confidence            88999999999999987654

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=1e-41  Score=282.24  Aligned_cols=236  Identities=20%  Similarity=0.217  Sum_probs=190.2

Q ss_pred             cccccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         6 ~~~~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      ||.++++|++|||||+  +|||++++++|+++|++|++++|+. ..++..+++....+   ...++.+|++|++++++++
T Consensus         3 mm~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~   78 (265)
T 1qsg_A            3 HMGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG---SDIVLQCDVAEDASIDTMF   78 (265)
T ss_dssp             --CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHH
T ss_pred             cccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC---CcEEEEccCCCHHHHHHHH
Confidence            4445889999999999  9999999999999999999999987 34444444432211   1478999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCC--CCCCCC-CCHHHHHHHHhhhchhhhHHHHHHHh-------------hhccccCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEV--KPNILD-NDQAEFERILSINLVGAFLGRNMLLG-------------VCGIIGGAA  147 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~~~~~~  147 (257)
                      +++.+.++++|+||||||.....  ..++.+ .+.++|++.+++|+.+++++.+.+..             ..+..+.+.
T Consensus        79 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~  158 (265)
T 1qsg_A           79 AELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN  158 (265)
T ss_dssp             HHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT
T ss_pred             HHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCC
Confidence            99999999999999999976420  134566 88999999999999999999887743             344556677


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcC
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ...|++||+|++.|+++++.|++++||++|+|+||+++|++.+...... ....... ..|.+++.+|+|+|+.++||++
T Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~dva~~v~~l~s  237 (265)
T 1qsg_A          159 YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFR-KMLAHCEAVTPIRRTVTIEDVGNSAAFLCS  237 (265)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHH-HHHHHHHHHSTTSSCCCHHHHHHHHHHHTS
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccH-HHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence            7899999999999999999999999999999999999999865421110 0001111 2456778999999999999999


Q ss_pred             CCCCcccccEEEecCceeee
Q 044485          227 DESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +.+.+++|+.+.+|||..+.
T Consensus       238 ~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          238 DLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             GGGTTCCSCEEEESTTGGGB
T ss_pred             chhcCccCCEEEECCCcCCC
Confidence            98899999999999998765

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-41  Score=279.83  Aligned_cols=228  Identities=31%  Similarity=0.472  Sum_probs=193.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.      .++.++++|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~   76 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG------ERSMFVRHDVSSEADWTLVMAAVQR   76 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC------TTEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC------CceEEEEccCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988887777762      2488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYTSS  154 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~~s  154 (257)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.              |..+..+.+....|++|
T Consensus        77 ~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  154 (253)
T 1hxh_A           77 RLGTLNVLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSAS  154 (253)
T ss_dssp             HHCSCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCCCccHHHH
Confidence            99999999999998754  678899999999999999999999877653              33444556677799999


Q ss_pred             HHHHHHHHHHHHHHhccC--CcEEEeecCCCccChhhHhHhhhhhccccC-cc----ccccCCCCCHHHHHHHHHHhcCC
Q 044485          155 KHGLLGLMKNTAVELGRF--GIRVNCVSPYAVSTPLAKDFLKLADDGLGG-MY----SNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~--gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      |++++.|+++++.|++++  ||++|+|+||+++|++......  +..... +.    ..|.+++.+|+|+|+.++||+++
T Consensus       155 K~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~  232 (253)
T 1hxh_A          155 KAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLP--KGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASD  232 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSC--TTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccc--hhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCc
Confidence            999999999999999988  9999999999999998764321  111111 10    23556788999999999999999


Q ss_pred             CCCcccccEEEecCceeee
Q 044485          228 ESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~~  246 (257)
                      .+.+++|+.+.+|||....
T Consensus       233 ~~~~~tG~~~~vdgG~~~~  251 (253)
T 1hxh_A          233 ESSVMSGSELHADNSILGM  251 (253)
T ss_dssp             GGTTCCSCEEEESSSCTTT
T ss_pred             cccCCCCcEEEECCCcccc
Confidence            9999999999999997643

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=8.9e-42  Score=282.73  Aligned_cols=232  Identities=26%  Similarity=0.403  Sum_probs=193.5

Q ss_pred             ccccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcchhh-HhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            7 LRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLG-ESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         7 ~~~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      ++++++|++|||||+  +|||+++|++|+++|++|++++|+.+.. ++..+++....+  .++.++.+|++|++++++++
T Consensus        15 ~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~   92 (267)
T 3gdg_A           15 QLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG--IKAKAYKCQVDSYESCEKLV   92 (267)
T ss_dssp             HHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHC--CCEECCBCCTTCHHHHHHHH
T ss_pred             ccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcC--CceeEEecCCCCHHHHHHHH
Confidence            357899999999999  9999999999999999999999887654 555555543221  34889999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccC--C
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGG--A  146 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~--~  146 (257)
                      +++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.  +
T Consensus        93 ~~~~~~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  170 (267)
T 3gdg_A           93 KDVVADFGQIDAFIANAGATAD--SGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQ  170 (267)
T ss_dssp             HHHHHHTSCCSEEEECCCCCCC--SCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSS
T ss_pred             HHHHHHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCC
Confidence            9999999999999999998765  668899999999999999999999977763               33333343  3


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcC
Q 044485          147 ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       147 ~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ....|++||+|+++|++.++.|++++ |++|+|+||+++|++.+.........+.  ...+.+++.+|+|+|+.++||++
T Consensus       171 ~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~~~~~~~~--~~~~~~r~~~~~dva~~~~~l~s  247 (267)
T 3gdg_A          171 EQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPKETQQLWH--SMIPMGRDGLAKELKGAYVYFAS  247 (267)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCHHHHHHHH--TTSTTSSCEETHHHHHHHHHHHS
T ss_pred             CCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCHHHHHHHH--hcCCCCCCcCHHHHHhHhheeec
Confidence            56789999999999999999999887 9999999999999987643222211111  13556788899999999999999


Q ss_pred             CCCCcccccEEEecCceee
Q 044485          227 DESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~  245 (257)
                      +.+.+++|+++.+|||+++
T Consensus       248 ~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          248 DASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             TTCTTCCSCEEEESTTGGG
T ss_pred             CccccccCCEEEECCceec
Confidence            9999999999999999864

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.8e-42  Score=285.08  Aligned_cols=239  Identities=29%  Similarity=0.432  Sum_probs=185.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++........++.++.+|++|+++++++++++.
T Consensus         2 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (278)
T 1spx_A            2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   81 (278)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988888777762211112348889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCC----CHHHHHHHHhhhchhhhHHHHHHH--------------hhhc-cccCCCC
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDN----DQAEFERILSINLVGAFLGRNMLL--------------GVCG-IIGGAAT  148 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~-~~~~~~~  148 (257)
                      +.+|++|+||||||....  .++.+.    +.++|++.+++|+.+++.+.+.+.              |..+ ..+.+..
T Consensus        82 ~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  159 (278)
T 1spx_A           82 GKFGKLDILVNNAGAAIP--DSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDF  159 (278)
T ss_dssp             HHHSCCCEEEECCC---------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTS
T ss_pred             HHcCCCCEEEECCCCCCC--cccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCCCc
Confidence            999999999999998654  556677    999999999999999999876663              2333 4455667


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc------ccCcc-ccccCCCCCHHHHHHHH
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG------LGGMY-SNLKGAVLEPEDAAEAA  221 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~a~~~  221 (257)
                      ..|++||++++.|+++++.|++++||++|+|+||+++|++...........      ..... ..|.+++.+|+|+|+.+
T Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v  239 (278)
T 1spx_A          160 PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVI  239 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHH
Confidence            789999999999999999999999999999999999999864321100000      00011 23557789999999999


Q ss_pred             HHhcCCCCCc-ccccEEEecCceeeeec
Q 044485          222 LYLGSDESKC-VSGHNLVVDGGFAIVNA  248 (257)
Q Consensus       222 ~~l~s~~~~~-~~G~~~~~dgG~~~~~~  248 (257)
                      +||+++...+ ++|+.+.+|||..+...
T Consensus       240 ~~l~s~~~~~~~tG~~~~vdgG~~~~~~  267 (278)
T 1spx_A          240 AFLADRKTSSYIIGHQLVVDGGSSLIMG  267 (278)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGGC--
T ss_pred             HHHcCccccCcccCcEEEECCCcccccC
Confidence            9999987776 99999999999876543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=3.5e-41  Score=277.04  Aligned_cols=223  Identities=18%  Similarity=0.195  Sum_probs=176.3

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |.+++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.++++..+   .++.++.+|++|++++++++++
T Consensus         1 M~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~   77 (252)
T 3h7a_A            1 MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG---GRIVARSLDARNEDEVTAFLNA   77 (252)
T ss_dssp             ----CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECcCCCHHHHHHHHHH
Confidence            4557889999999999999999999999999999999999999999988886653   3489999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~  150 (257)
                      +.+. +++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+               +|..+..+.+....
T Consensus        78 ~~~~-g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  154 (252)
T 3h7a_A           78 ADAH-APLEVTIFNVGANVN--FPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAA  154 (252)
T ss_dssp             HHHH-SCEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHH
T ss_pred             HHhh-CCceEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCcc
Confidence            9999 999999999998765  67889999999999999999999987766               34556667788889


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEE-EeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRV-NCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v-~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      |++||+|+++|+++++.|++++||+| |+|+||+++|++.+.......   .... ..+.+ +.+|+|+|+.++||+++.
T Consensus       155 Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~~-~~~pedvA~~~~~l~s~~  230 (252)
T 3h7a_A          155 FASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMF---GKDALANPDL-LMPPAAVAGAYWQLYQQP  230 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------CCHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhh---hhhhhcCCcc-CCCHHHHHHHHHHHHhCc
Confidence            99999999999999999999999999 999999999999876532211   1111 23334 889999999999999988


Q ss_pred             CCcccccEEE
Q 044485          229 SKCVSGHNLV  238 (257)
Q Consensus       229 ~~~~~G~~~~  238 (257)
                      ...++|+...
T Consensus       231 ~~~~~~~i~~  240 (252)
T 3h7a_A          231 KSAWTFEMEI  240 (252)
T ss_dssp             GGGBCSEEEE
T ss_pred             hhcceeeEEe
Confidence            8888888643

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=1e-41  Score=283.51  Aligned_cols=222  Identities=26%  Similarity=0.333  Sum_probs=183.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh-------hHhHHHHhccCCCCCCCceeEecCCCCHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-------GESVCKDIGSSSSSASGCSYVHCDVTKEKDIE   80 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~   80 (257)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++...+   .++.++.+|++|+++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~   78 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG---GQGLALKCDIREEDQVR   78 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHT---SEEEEEECCTTCHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcC---CeEEEEeCCCCCHHHHH
Confidence            46889999999999999999999999999999999998764       444455444332   34889999999999999


Q ss_pred             HHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh---------------cccc-
Q 044485           81 NAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC---------------GIIG-  144 (257)
Q Consensus        81 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~---------------~~~~-  144 (257)
                      ++++++.+.+|++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.+.+               +..+ 
T Consensus        79 ~~~~~~~~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  156 (274)
T 3e03_A           79 AAVAATVDTFGGIDILVNNASAIWL--RGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA  156 (274)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCC--CCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCcccC--CCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC
Confidence            9999999999999999999998755  678899999999999999999999988875432               2222 


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCC-CccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHH
Q 044485          145 -GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPY-AVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL  222 (257)
Q Consensus       145 -~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  222 (257)
                       .+....|++||+|+++|+|+++.|++++||+||+|+|| .++|++.....           ..+..++.+|+|+|+.++
T Consensus       157 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~-----------~~~~~~~~~pedvA~~v~  225 (274)
T 3e03_A          157 WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLP-----------GVDAAACRRPEIMADAAH  225 (274)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------CCCGGGSBCTHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcc-----------cccccccCCHHHHHHHHH
Confidence             23456799999999999999999999999999999999 69999863221           112334679999999999


Q ss_pred             HhcCCCCCcccccEEEecCceeee
Q 044485          223 YLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       223 ~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ||+++.+.+++|+++ +|||....
T Consensus       226 ~l~s~~~~~itG~~i-~~~g~~~~  248 (274)
T 3e03_A          226 AVLTREAAGFHGQFL-IDDEVLAQ  248 (274)
T ss_dssp             HHHTSCCTTCCSCEE-EHHHHHHH
T ss_pred             HHhCccccccCCeEE-EcCcchhh
Confidence            999999999999999 88886553

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=5.6e-42  Score=283.46  Aligned_cols=227  Identities=32%  Similarity=0.493  Sum_probs=189.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.      .++.++.+|++|+++++++++++.
T Consensus         2 ~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~   75 (263)
T 2a4k_A            2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE------AEAIAVVADVSDPKAVEAVFAEAL   75 (263)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC------SSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------CceEEEEcCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988877776653      238899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh-------------ccccCCCCchhhhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC-------------GIIGGAATHAYTSS  154 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~-------------~~~~~~~~~~y~~s  154 (257)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+....             +. +.+....|++|
T Consensus        76 ~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~Y~as  152 (263)
T 2a4k_A           76 EEFGRLHGVAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAG  152 (263)
T ss_dssp             HHHSCCCEEEEGGGGTTT--TC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHHHHC
T ss_pred             HHcCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCCcHHHHHH
Confidence            999999999999998754  678889999999999999999999988775432             11 22334579999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      |++++.|+++++.|++++||++|+|+||+++|++.......   ...... ..|.+++.+|+|+|+.++||+++.+.+++
T Consensus       153 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~t  229 (263)
T 2a4k_A          153 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPW---AWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYIT  229 (263)
T ss_dssp             SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHH---HHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCc
Confidence            99999999999999999999999999999999986542110   000011 34557789999999999999999999999


Q ss_pred             ccEEEecCceeee
Q 044485          234 GHNLVVDGGFAIV  246 (257)
Q Consensus       234 G~~~~~dgG~~~~  246 (257)
                      |+.+.+|||..+.
T Consensus       230 G~~i~vdgG~~~~  242 (263)
T 2a4k_A          230 GQALYVDGGRSIV  242 (263)
T ss_dssp             SCEEEESTTTTTC
T ss_pred             CCEEEECCCcccc
Confidence            9999999998765

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=4e-41  Score=280.07  Aligned_cols=233  Identities=22%  Similarity=0.250  Sum_probs=191.4

Q ss_pred             ccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ++++|++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++....+   .+.++.+|++|+++++++++++
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~   78 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN---SPYVYELDVSKEEHFKSLYNSV   78 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC---CcEEEEcCCCCHHHHHHHHHHH
Confidence            5789999999999  99999999999999999999999976 4444444433221   2688999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEV--KPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||.....  ..++.+.+.++|++.+++|+.+++.+.+.+.+             ..+..+.+....|
T Consensus        79 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  158 (275)
T 2pd4_A           79 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVM  158 (275)
T ss_dssp             HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHH
T ss_pred             HHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhh
Confidence            99999999999999986420  14577889999999999999999999887743             3445566677889


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      ++||+|++.|+++++.|++++||++|+|+||+++|++.+..... +.....+. ..|.+++.+|+|+|+.++||+++.+.
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~  237 (275)
T 2pd4_A          159 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF-RMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSS  237 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH-HHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcccc-HHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999999986542111 01001111 34567789999999999999999889


Q ss_pred             cccccEEEecCceeee
Q 044485          231 CVSGHNLVVDGGFAIV  246 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~  246 (257)
                      +++|+.+.+|||..+.
T Consensus       238 ~~tG~~~~vdgg~~~~  253 (275)
T 2pd4_A          238 GVSGEVHFVDAGYHVM  253 (275)
T ss_dssp             TCCSCEEEESTTGGGB
T ss_pred             CCCCCEEEECCCcccC
Confidence            9999999999998764

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=4.5e-42  Score=292.75  Aligned_cols=236  Identities=20%  Similarity=0.242  Sum_probs=190.4

Q ss_pred             CCcEEEEecCCC--chHHHHHHHHHHcCCeEEEeeCcc---------hhhHhHHHHhccCCCCCCCceeEecCCCCH--H
Q 044485           11 QGKVALITGGAR--GIGECTARLFSKHGAKVLIADIKD---------DLGESVCKDIGSSSSSASGCSYVHCDVTKE--K   77 (257)
Q Consensus        11 ~~k~~lItGas~--giG~~ia~~l~~~g~~Vi~~~r~~---------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~--~   77 (257)
                      ++|++||||+++  |||+++|++|+++|++|++++|++         +.++...+...........+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  999999999999999999776654         333333333332222223367888888888  7


Q ss_pred             ------------------HHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--
Q 044485           78 ------------------DIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--  137 (257)
Q Consensus        78 ------------------~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--  137 (257)
                                        +++++++++.+.++++|+||||||+......++.+.+.++|++++++|+.+++.+.+.+.  
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              999999999999999999999999754333678899999999999999999999988774  


Q ss_pred             -----------hhhccccCCCCc-hhhhhHHHHHHHHHHHHHHhcc-CCcEEEeecCCCccChhhHhHhhhhhc------
Q 044485          138 -----------GVCGIIGGAATH-AYTSSKHGLLGLMKNTAVELGR-FGIRVNCVSPYAVSTPLAKDFLKLADD------  198 (257)
Q Consensus       138 -----------s~~~~~~~~~~~-~y~~sK~a~~~~~~~l~~e~~~-~gi~v~~i~pg~v~t~~~~~~~~~~~~------  198 (257)
                                 |..+..+.+... .|++||+|+.+|+++|+.|+++ +||+||+|+||+++|++.+......+.      
T Consensus       161 m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  240 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN  240 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC-----------
T ss_pred             HhhCCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccccccccc
Confidence                       445666777775 9999999999999999999998 899999999999999998764221000      


Q ss_pred             -------------------c-----------------ccCc-cccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecC
Q 044485          199 -------------------G-----------------LGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDG  241 (257)
Q Consensus       199 -------------------~-----------------~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dg  241 (257)
                                         .                 .... ...|.+++.+|+|+|+.++||+|+.+.++||+++.+||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~vdG  320 (329)
T 3lt0_A          241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDN  320 (329)
T ss_dssp             -------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEEEcC
Confidence                               0                 0001 14567889999999999999999999999999999999


Q ss_pred             ceeee
Q 044485          242 GFAIV  246 (257)
Q Consensus       242 G~~~~  246 (257)
                      |.++.
T Consensus       321 G~~~~  325 (329)
T 3lt0_A          321 GLNIM  325 (329)
T ss_dssp             TGGGC
T ss_pred             CeeEE
Confidence            99874

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=7.9e-41  Score=273.90  Aligned_cols=221  Identities=26%  Similarity=0.360  Sum_probs=190.0

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCC--CCHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDV--TKEKDIENAV   83 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~--~~~~~v~~~~   83 (257)
                      .+.++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+...  +.++.+|+  ++.+++++++
T Consensus         8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~d~d~~~~~~~~~~~   85 (247)
T 3i1j_A            8 HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQ--PLIIALNLENATAQQYRELA   85 (247)
T ss_dssp             CTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCC--CEEEECCTTTCCHHHHHHHH
T ss_pred             CCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCC--ceEEEeccccCCHHHHHHHH
Confidence            3456899999999999999999999999999999999999999998888887654333  55666666  9999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAAT  148 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~  148 (257)
                      +++.+.++++|+||||||..... .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+..
T Consensus        86 ~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  164 (247)
T 3i1j_A           86 ARVEHEFGRLDGLLHNASIIGPR-TPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANW  164 (247)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCC-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHhCCCCCEEEECCccCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCc
Confidence            99999999999999999986432 578899999999999999999999987773               44556667778


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcc-CCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGR-FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~-~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ..|++||+|++.|++.++.|+++ +||++|+|+||+++|++.......          ....+..+|+|+|+.++||+++
T Consensus       165 ~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~~p~dva~~~~~l~s~  234 (247)
T 3i1j_A          165 GAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPD----------ENPLNNPAPEDIMPVYLYLMGP  234 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTT----------SCGGGSCCGGGGTHHHHHHHSG
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccc----------cCccCCCCHHHHHHHHHHHhCc
Confidence            89999999999999999999987 899999999999999987654321          1123467899999999999999


Q ss_pred             CCCcccccEEEe
Q 044485          228 ESKCVSGHNLVV  239 (257)
Q Consensus       228 ~~~~~~G~~~~~  239 (257)
                      .+.+++|++|++
T Consensus       235 ~~~~itG~~i~~  246 (247)
T 3i1j_A          235 DSTGINGQALNA  246 (247)
T ss_dssp             GGTTCCSCEEEC
T ss_pred             hhccccCeeecC
Confidence            999999999975

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=1e-40  Score=273.93  Aligned_cols=221  Identities=24%  Similarity=0.327  Sum_probs=174.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.        ...     .+.++.+|++|+++++++++++.+
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~-----~~~~~~~D~~d~~~~~~~~~~~~~   70 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQY-----PFATEVMDVADAAQVAQVCQRLLA   70 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCC-----SSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcC-----CceEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998652        111     167899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|++
T Consensus        71 ~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~  148 (250)
T 2fwm_X           71 ETERLDALVNAAGILRM--GATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGA  148 (250)
T ss_dssp             HCSCCCEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHH
Confidence            99999999999998654  678889999999999999999999877662               3445556677789999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcccc-Ccc--------ccccCCCCCHHHHHHHHHHh
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG-GMY--------SNLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~a~~~~~l  224 (257)
                      ||++++.|+++++.|++++||++|+|+||+++|++........ .... .+.        ..|.+++.+|+|+|+.++||
T Consensus       149 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l  227 (250)
T 2fwm_X          149 SKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSD-DAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFL  227 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------------CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccCh-hHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999865432111 1001 111        24566789999999999999


Q ss_pred             cCCCCCcccccEEEecCceee
Q 044485          225 GSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       225 ~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      +++.+.+++|+.+.+|||..+
T Consensus       228 ~s~~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          228 ASDLASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             HSGGGTTCCSCEEEESTTTTT
T ss_pred             hCccccCCCCCEEEECCCccc
Confidence            999889999999999999753

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=4.6e-41  Score=281.48  Aligned_cols=231  Identities=24%  Similarity=0.351  Sum_probs=188.5

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCCCCceeEecCCCC----HHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDVTK----EKDIEN   81 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~----~~~v~~   81 (257)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+. +.++++.+++....+  .++.++.+|++|    ++++++
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~~~~~v~~   95 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS--NTAVVCQADLTNSNVLPASCEE   95 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSCSTTHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC--CceEEEEeecCCccCCHHHHHH
Confidence            4468899999999999999999999999999999999998 777777777642111  348899999999    999999


Q ss_pred             HHHHHHHHcCCccEEEeCCCCCCCCCCCC-----CC-----CCHHHHHHHHhhhchhhhHHHHHHHhh------------
Q 044485           82 AVNTAVTQYGKLDIMFNNAGTVDEVKPNI-----LD-----NDQAEFERILSINLVGAFLGRNMLLGV------------  139 (257)
Q Consensus        82 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~s~------------  139 (257)
                      +++++.+.++++|+||||||+...  .++     .+     .+.++|++.+++|+.+++.+.+.+...            
T Consensus        96 ~~~~~~~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~  173 (288)
T 2x9g_A           96 IINSCFRAFGRCDVLVNNASAFYP--TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSN  173 (288)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCC--CCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCC--CccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCC
Confidence            999999999999999999998654  445     56     888999999999999999987766432            


Q ss_pred             ---------hccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccC
Q 044485          140 ---------CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKG  209 (257)
Q Consensus       140 ---------~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~  209 (257)
                               .+..+.+....|++||+|++.|+++++.|++++||+||+|+||+++|++ ......    ...+. ..+.+
T Consensus       174 g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~~~~----~~~~~~~~p~~  248 (288)
T 2x9g_A          174 LSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMGEEE----KDKWRRKVPLG  248 (288)
T ss_dssp             EEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSCHHH----HHHHHHTCTTT
T ss_pred             eEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccChHH----HHHHHhhCCCC
Confidence                     2233455667899999999999999999999999999999999999998 311000    01111 24556


Q ss_pred             CC-CCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          210 AV-LEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       210 ~~-~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ++ .+|+|+|+.++||+++.+.+++|+.+.+|||..+.
T Consensus       249 r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          249 RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence            77 89999999999999999999999999999998754

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=2.3e-41  Score=276.78  Aligned_cols=219  Identities=27%  Similarity=0.410  Sum_probs=183.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHH-cCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSK-HGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~-~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .++|++|||||++|||+++|++|++ .|+.|++++|+++..             ..++.++.+|++|+++++++++.+. 
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~-   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-------------AENLKFIKADLTKQQDITNVLDIIK-   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-------------CTTEEEEECCTTCHHHHHHHHHHTT-
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-------------cccceEEecCcCCHHHHHHHHHHHH-
Confidence            3579999999999999999999999 789999999876421             1136889999999999999996554 


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchhhhhH
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y~~sK  155 (257)
                       ++++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.             |..+..+.+....|++||
T Consensus        68 -~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK  144 (244)
T 4e4y_A           68 -NVSFDGIFLNAGILIK--GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSK  144 (244)
T ss_dssp             -TCCEEEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHH
T ss_pred             -hCCCCEEEECCccCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHH
Confidence             6799999999998765  678899999999999999999999987763             445566677788999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc--------cccC-ccccccCCCCCHHHHHHHHHHhcC
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD--------GLGG-MYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      +|+++|+++++.|++++||++|+|+||+++|++.+........        .... ....|.+++.+|+|+|+.++||++
T Consensus       145 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s  224 (244)
T 4e4y_A          145 GAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLS  224 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999998765432110        0001 114566788999999999999999


Q ss_pred             CCCCcccccEEEecCceee
Q 044485          227 DESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~  245 (257)
                      +.+.+++|+.+.+|||..+
T Consensus       225 ~~~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          225 DKSKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             CccccccCCeEeECCCccC
Confidence            9999999999999999864

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=1.2e-40  Score=275.67  Aligned_cols=229  Identities=28%  Similarity=0.476  Sum_probs=192.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.              ..++.++.+|++|+++++++++++.
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------------~~~~~~~~~Dl~~~~~v~~~~~~~~   69 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------------EAKYDHIECDVTNPDQVKASIDHIF   69 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------------SCSSEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------------CCceEEEEecCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998653              1237889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|+
T Consensus        70 ~~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  147 (264)
T 2dtx_A           70 KEYGSISVLVNNAGIESY--GKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYV  147 (264)
T ss_dssp             HHHSCCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHH
Confidence            999999999999998754  678889999999999999999999877663               334455566778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh----hh----ccccCcc-ccccCCCCCHHHHHHHHHH
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL----AD----DGLGGMY-SNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~----~~----~~~~~~~-~~~~~~~~~~~~~a~~~~~  223 (257)
                      +||++++.|++.++.|++++ |++|+|+||+++|++.......    ..    ....... ..+.+++.+|+|+|+.++|
T Consensus       148 ~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~  226 (264)
T 2dtx_A          148 TSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAF  226 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999998 9999999999999987653210    00    0000111 2456788999999999999


Q ss_pred             hcCCCCCcccccEEEecCceeeeecceeec
Q 044485          224 LGSDESKCVSGHNLVVDGGFAIVNAGFSVF  253 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~~~~~~~~~  253 (257)
                      |+++.+.+++|+.+.+|||..+..|..++-
T Consensus       227 l~s~~~~~~tG~~i~vdGG~~~~~p~~~~~  256 (264)
T 2dtx_A          227 LASREASFITGTCLYVDGGLSIRAPISTPE  256 (264)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGCCCCCCCC
T ss_pred             HhCchhcCCCCcEEEECCCcccCCCCCCcc
Confidence            999988999999999999998877665543

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.3e-40  Score=274.64  Aligned_cols=235  Identities=33%  Similarity=0.484  Sum_probs=195.4

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-cchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      |+.++++|++|||||++|||++++++|+++|++|++++| +.+.++++.+++...+   .++.++.+|++|+++++++++
T Consensus         1 m~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~   77 (261)
T 1gee_A            1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG---GEAIAVKGDVTVESDVINLVQ   77 (261)
T ss_dssp             CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC---CceEEEECCCCCHHHHHHHHH
Confidence            456788999999999999999999999999999999999 7777777777665432   247889999999999999999


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCC
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAAT  148 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~  148 (257)
                      ++.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.                |..+..+.+..
T Consensus        78 ~~~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  155 (261)
T 1gee_A           78 SAIKEFGKLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF  155 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTC
T ss_pred             HHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCc
Confidence            999999999999999998754  567788999999999999999998866553                23344455667


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ..|++||+|++.|++.++.|++++||++++|+||+++|++......... ...... ..+.+++.+|+|+|+.+++|+++
T Consensus       156 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  234 (261)
T 1gee_A          156 VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPE-QRADVESMIPMGYIGEPEEIAAVAAWLASS  234 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHH-HHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChh-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            7899999999999999999999999999999999999998765421111 000111 23456788999999999999998


Q ss_pred             CCCcccccEEEecCceeee
Q 044485          228 ESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~~  246 (257)
                      ...+++|+++.+|||..+.
T Consensus       235 ~~~~~~G~~~~v~gg~~~~  253 (261)
T 1gee_A          235 EASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             GGTTCCSCEEEESTTGGGC
T ss_pred             cccCCCCcEEEEcCCcccC
Confidence            8889999999999998754

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.3e-41  Score=278.38  Aligned_cols=218  Identities=26%  Similarity=0.376  Sum_probs=183.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+..++            .++.++.+|++|+++++++++++.
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------------~~~~~~~~Dv~d~~~v~~~~~~~~   91 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD------------PDIHTVAGDISKPETADRIVREGI   91 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS------------TTEEEEESCTTSHHHHHHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc------------CceEEEEccCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999998754321            138899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------hhcc--ccCCCCch
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------VCGI--IGGAATHA  150 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------~~~~--~~~~~~~~  150 (257)
                      +.+|++|+||||||+...  .++.+.+.++|++.+++|+.+++.+.+.+.+               ..+.  .+..+...
T Consensus        92 ~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~  169 (260)
T 3un1_A           92 ERFGRIDSLVNNAGVFLA--KPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSAL  169 (260)
T ss_dssp             HHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHH
T ss_pred             HHCCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHH
Confidence            999999999999998765  6788999999999999999999999876632               1122  22334568


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      |++||+|++.|+++++.|++++||++|+|+||+++|++........   .  ....|.+++.+|+|+|++++||  +.+.
T Consensus       170 Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~---~--~~~~p~~r~~~~~dva~av~~L--~~~~  242 (260)
T 3un1_A          170 ASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHST---L--AGLHPVGRMGEIRDVVDAVLYL--EHAG  242 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHH---H--HTTSTTSSCBCHHHHHHHHHHH--HHCT
T ss_pred             HHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHH---H--hccCCCCCCcCHHHHHHHHHHh--cccC
Confidence            9999999999999999999999999999999999999865321110   0  0134667899999999999999  5577


Q ss_pred             cccccEEEecCceeee
Q 044485          231 CVSGHNLVVDGGFAIV  246 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~  246 (257)
                      +++|+++++|||..+.
T Consensus       243 ~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          243 FITGEILHVDGGQNAG  258 (260)
T ss_dssp             TCCSCEEEESTTGGGC
T ss_pred             CCCCcEEEECCCeecc
Confidence            8999999999998653

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.3e-40  Score=276.59  Aligned_cols=228  Identities=31%  Similarity=0.387  Sum_probs=183.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEe-eCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .++|++|||||++|||+++|++|+++|++|+++ .|+.+.++++.+++...+   .++.++.+|++|+++++++++++.+
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~  100 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG---GEAVAIPGDVGNAADIAAMFSAVDR  100 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            357999999999999999999999999999776 677777777777775543   3488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh------------------hccccCC-CCc
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV------------------CGIIGGA-ATH  149 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~------------------~~~~~~~-~~~  149 (257)
                      .++++|+||||||.... ..++.+.+.++|++.+++|+.+++.+.+.+...                  .+..+.+ ...
T Consensus       101 ~~g~id~li~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  179 (272)
T 4e3z_A          101 QFGRLDGLVNNAGIVDY-PQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYV  179 (272)
T ss_dssp             HHSCCCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCH
T ss_pred             hCCCCCEEEECCCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcc
Confidence            99999999999998653 256888999999999999999999987666432                  2333444 456


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      .|++||+|++.|++++++|++++||++++|+||+++|++......  +...... ...+.+++.+|+|+|+.++||+++.
T Consensus       180 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~  257 (272)
T 4e3z_A          180 DYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGL--PDRAREMAPSVPMQRAGMPEEVADAILYLLSPS  257 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------CCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCC--hHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCc
Confidence            799999999999999999999999999999999999998654211  1111111 1456677889999999999999999


Q ss_pred             CCcccccEEEecCce
Q 044485          229 SKCVSGHNLVVDGGF  243 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~  243 (257)
                      ..+++|+.+++|||.
T Consensus       258 ~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          258 ASYVTGSILNVSGGR  272 (272)
T ss_dssp             GTTCCSCEEEESTTC
T ss_pred             cccccCCEEeecCCC
Confidence            999999999999994

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=1.1e-40  Score=278.78  Aligned_cols=236  Identities=24%  Similarity=0.312  Sum_probs=189.5

Q ss_pred             cccccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         6 ~~~~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      ||.++++|++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++....+   .+.++.+|++|++++++++
T Consensus        15 ~m~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~---~~~~~~~Dl~~~~~v~~~~   90 (285)
T 2p91_A           15 FMGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG---SDLVVKCDVSLDEDIKNLK   90 (285)
T ss_dssp             --CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHH
T ss_pred             hhhccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHH
Confidence            4445899999999999  99999999999999999999999875 4444444432211   2678999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh--------------hhccccCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEV--KPNILDNDQAEFERILSINLVGAFLGRNMLLG--------------VCGIIGGAA  147 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s--------------~~~~~~~~~  147 (257)
                      +++.+.++++|+||||||.....  ..++.+.+.++|++.+++|+.+++.+.+.+..              ..+..+.+.
T Consensus        91 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~  170 (285)
T 2p91_A           91 KFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPH  170 (285)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTT
T ss_pred             HHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCC
Confidence            99999999999999999976420  14577889999999999999999999877643              334445666


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcC
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ...|++||+|++.|+++++.|++++||++|+|+||+++|++.+...... ...... ...|.+++.+|+|+|+.++||++
T Consensus       171 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~dva~~~~~l~s  249 (285)
T 2p91_A          171 YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFH-LLMEHTTKVNPFGKPITIEDVGDTAVFLCS  249 (285)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHH-HHHHHHHHHSTTSSCCCHHHHHHHHHHHTS
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchH-HHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            7789999999999999999999999999999999999999864321100 000001 13456778999999999999999


Q ss_pred             CCCCcccccEEEecCceeee
Q 044485          227 DESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +.+.+++|+.+.+|||..+.
T Consensus       250 ~~~~~~tG~~~~vdgg~~~~  269 (285)
T 2p91_A          250 DWARAITGEVVHVDNGYHIM  269 (285)
T ss_dssp             GGGTTCCSCEEEESTTGGGB
T ss_pred             CcccCCCCCEEEECCCcccc
Confidence            98899999999999998764

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-40  Score=275.19  Aligned_cols=227  Identities=23%  Similarity=0.341  Sum_probs=182.5

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +.+|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|+++++++++++.+.
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~   78 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG---GTALAQVLDVTDRHSVAAFAQAAVDT   78 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            357999999999999999999999999999999999999988888886543   34889999999999999999999999


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhh
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSS  154 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~s  154 (257)
                      +|++|+||||||+...  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|++|
T Consensus        79 ~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~as  156 (264)
T 3tfo_A           79 WGRIDVLVNNAGVMPL--SPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCAT  156 (264)
T ss_dssp             HSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHH
Confidence            9999999999998754  678899999999999999999999877663               45566677788899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      |+|+++|+|+++.|+ + |||||+|+||+++|++...........   ..........+|+|+|+.++||+++...+.+|
T Consensus       157 Kaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~---~~~~~~~~~~~pedvA~~v~~l~s~~~~~~~~  231 (264)
T 3tfo_A          157 KFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMA---AMDTYRAIALQPADIARAVRQVIEAPQSVDTT  231 (264)
T ss_dssp             HHHHHHHHHHHHHHC-S-SEEEEEEEECCC--------------------------CCCHHHHHHHHHHHHHSCTTEEEE
T ss_pred             HHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHH---HHHhhhccCCCHHHHHHHHHHHhcCCccCccc
Confidence            999999999999998 5 999999999999999876543221111   11111223579999999999999999999999


Q ss_pred             cEEEecCceeee
Q 044485          235 HNLVVDGGFAIV  246 (257)
Q Consensus       235 ~~~~~dgG~~~~  246 (257)
                      +.+..++|..+.
T Consensus       232 ~i~i~p~~~~~~  243 (264)
T 3tfo_A          232 EITIRPTASGNA  243 (264)
T ss_dssp             EEEEEECC----
T ss_pred             eEEEecCccccc
Confidence            999999998765

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-40  Score=282.91  Aligned_cols=231  Identities=20%  Similarity=0.254  Sum_probs=189.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEee-CcchhhHhHHHHhccCCCCCCCceeEecCCCCHH---------
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIAD-IKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEK---------   77 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~---------   77 (257)
                      .++.+|++|||||++|||++++++|+++|++|++++ |+.+.++++.+++....+  .++.++.+|++|++         
T Consensus        42 ~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~  119 (328)
T 2qhx_A           42 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP--NSAITVQADLSNVATAPVSGADG  119 (328)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSCBCC------
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC--CeEEEEEeeCCCchhcccccccc
Confidence            348899999999999999999999999999999999 998888888777752111  34889999999999         


Q ss_pred             --------HHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCC--------------HHHHHHHHhhhchhhhHHHHH
Q 044485           78 --------DIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDND--------------QAEFERILSINLVGAFLGRNM  135 (257)
Q Consensus        78 --------~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~  135 (257)
                              +++++++++.+.++++|+||||||+...  .++.+.+              .++|++.+++|+.+++.+.+.
T Consensus       120 ~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  197 (328)
T 2qhx_A          120 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  197 (328)
T ss_dssp             -CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence                    9999999999999999999999998754  5677788              999999999999999998777


Q ss_pred             HHhh---------------------hccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhh
Q 044485          136 LLGV---------------------CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLK  194 (257)
Q Consensus       136 ~~s~---------------------~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~  194 (257)
                      +...                     .+..+.+....|++||+|++.|++.|+.|++++||+||+|+||+++|++ .....
T Consensus       198 ~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~~~  276 (328)
T 2qhx_A          198 FAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPPA  276 (328)
T ss_dssp             HHHHHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSCHH
T ss_pred             HHHHHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cccHH
Confidence            6532                     2333455667899999999999999999999999999999999999998 32211


Q ss_pred             hhhccccCccccccC-CCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          195 LADDGLGGMYSNLKG-AVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       195 ~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .....   ....|.+ ++.+|+|+|+.++||+++.+.+++|+++.+|||..+.
T Consensus       277 ~~~~~---~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  326 (328)
T 2qhx_A          277 VWEGH---RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  326 (328)
T ss_dssp             HHHHH---HTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHH---HhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcccC
Confidence            10000   0123555 7889999999999999998999999999999998653

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=9.5e-41  Score=273.47  Aligned_cols=224  Identities=31%  Similarity=0.547  Sum_probs=182.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++++. ++.       ++.++.+|++|+++++    ++.
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~-------~~~~~~~D~~~~~~~~----~~~   69 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYP-------GIQTRVLDVTKKKQID----QFA   69 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GST-------TEEEEECCTTCHHHHH----HHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hcc-------CceEEEeeCCCHHHHH----HHH
Confidence            3578999999999999999999999999999999999987766554 331       3788999999999988    444


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCC-CCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGA-ATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~-~~~~y  151 (257)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+ ....|
T Consensus        70 ~~~~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y  147 (246)
T 2ag5_A           70 NEVERLDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVY  147 (246)
T ss_dssp             HHCSCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHH
T ss_pred             HHhCCCCEEEECCccCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccH
Confidence            567899999999998754  567889999999999999999999877663               223334445 66789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh---hhccccCcc-ccccCCCCCHHHHHHHHHHhcCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL---ADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ++||++++.|+++++.|++++||++|+|+||+++|++.......   .......+. ..+.+++.+|+|+|+.++||+++
T Consensus       148 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~  227 (246)
T 2ag5_A          148 STTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASD  227 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999999987542210   011011111 34567788999999999999999


Q ss_pred             CCCcccccEEEecCceee
Q 044485          228 ESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~  245 (257)
                      .+.+++|+.+.+|||+.+
T Consensus       228 ~~~~~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          228 ESAYVTGNPVIIDGGWSL  245 (246)
T ss_dssp             GGTTCCSCEEEECTTGGG
T ss_pred             cccCCCCCEEEECCCccC
Confidence            999999999999999753

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.7e-41  Score=276.05  Aligned_cols=225  Identities=23%  Similarity=0.241  Sum_probs=186.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcC--CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHG--AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +|++|||||++|||+++|++|+++|  +.|++++|+.+.++++.+++.      .++.++.+|++|+++++++++++.+.
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG------DRFFYVVGDITEDSVLKQLVNAAVKG   75 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG------GGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC------CceEEEECCCCCHHHHHHHHHHHHHh
Confidence            6899999999999999999999985  789999999988888877763      23889999999999999999999999


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhhhhH
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~~sK  155 (257)
                      +|++|+||||||..... .++.+.+.++|++.+++|+.+++++.+.+.              |..+..+.+....|++||
T Consensus        76 ~g~id~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~~~~Y~asK  154 (254)
T 3kzv_A           76 HGKIDSLVANAGVLEPV-QNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSK  154 (254)
T ss_dssp             HSCCCEEEEECCCCCCC-TTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCCSHHHHHHH
T ss_pred             cCCccEEEECCcccCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCCcchHHHHH
Confidence            99999999999986432 578899999999999999999999977763              344555667788999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh------hccccCcc-ccccCCCCCHHHHHHHHHHhcCCC
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA------DDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      +|+++|+|+++.|+  +|||||+|+||+++|++.+......      ++....+. ..+.+++.+|+|+|+.++||+++.
T Consensus       155 ~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~  232 (254)
T 3kzv_A          155 AALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHG  232 (254)
T ss_dssp             HHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhc
Confidence            99999999999998  6899999999999999875432110      00011111 356678999999999999999999


Q ss_pred             -CCcccccEEEecCceee
Q 044485          229 -SKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       229 -~~~~~G~~~~~dgG~~~  245 (257)
                       +.+++|+++.+|||...
T Consensus       233 ~~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          233 IPDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             CCGGGTTCEEETTCGGGG
T ss_pred             ccCCCCccEEEecCcccc
Confidence             49999999999999753

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1e-40  Score=273.47  Aligned_cols=222  Identities=25%  Similarity=0.412  Sum_probs=179.4

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+.+++              +..+.+|++|+++++++++++
T Consensus        10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--------------~~~~~~D~~~~~~~~~~~~~~   75 (247)
T 1uzm_A           10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG--------------LFGVEVDVTDSDAVDRAFTAV   75 (247)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT--------------SEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--------------hcCeeccCCCHHHHHHHHHHH
Confidence            446889999999999999999999999999999999998754322              223789999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|
T Consensus        76 ~~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  153 (247)
T 1uzm_A           76 EEHQGPVEVLVSNAGLSAD--AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANY  153 (247)
T ss_dssp             HHHHSSCSEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHH
T ss_pred             HHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhH
Confidence            9999999999999998754  568899999999999999999999877663               23344455667799


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++||+|++.|++.++.|++++||++|+|+||+++|++............  ....+.+++.+|+|+|+.++||+++.+.+
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~--~~~~p~~~~~~~~dvA~~~~~l~s~~~~~  231 (247)
T 1uzm_A          154 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGA--LQFIPAKRVGTPAEVAGVVSFLASEDASY  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHH--GGGCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHH--HhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            9999999999999999999999999999999999998654211110100  01235567899999999999999998899


Q ss_pred             ccccEEEecCceeee
Q 044485          232 VSGHNLVVDGGFAIV  246 (257)
Q Consensus       232 ~~G~~~~~dgG~~~~  246 (257)
                      ++|+++.+|||..+.
T Consensus       232 ~~G~~i~vdgG~~~~  246 (247)
T 1uzm_A          232 ISGAVIPVDGGMGMG  246 (247)
T ss_dssp             CCSCEEEESTTTTC-
T ss_pred             CcCCEEEECCCcccC
Confidence            999999999997643

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=3.5e-40  Score=268.97  Aligned_cols=219  Identities=30%  Similarity=0.426  Sum_probs=183.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||++|||++++++|+++|++|++++|+.+.   ..+++.        +.++.+|++| ++++++++++.+.++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~--------~~~~~~D~~~-~~~~~~~~~~~~~~g   69 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSLG--------AVPLPTDLEK-DDPKGLVKRALEALG   69 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHT--------CEEEECCTTT-SCHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhhC--------cEEEecCCch-HHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999999765   333331        6788999999 999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccC--CCCchhhhh
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGG--AATHAYTSS  154 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~--~~~~~y~~s  154 (257)
                      ++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.  +....|++|
T Consensus        70 ~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~s  147 (239)
T 2ekp_A           70 GLHVLVHAAAVNVR--KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTA  147 (239)
T ss_dssp             SCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHH
Confidence            99999999998754  678899999999999999999999877663               33344444  667799999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      |++++.|++.++.|++++||++|+|+||+++|++....... +...... ...|.+++.+|+|+|+.++||+++.+.+++
T Consensus       148 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~t  226 (239)
T 2ekp_A          148 KTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQN-PELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLT  226 (239)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC-HHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCC
Confidence            99999999999999999999999999999999987643211 1111111 134567789999999999999999889999


Q ss_pred             ccEEEecCceee
Q 044485          234 GHNLVVDGGFAI  245 (257)
Q Consensus       234 G~~~~~dgG~~~  245 (257)
                      |+.+.+|||..+
T Consensus       227 G~~~~vdgG~~~  238 (239)
T 2ekp_A          227 GQAVAVDGGFLA  238 (239)
T ss_dssp             SCEEEESTTTTT
T ss_pred             CCEEEECCCccc
Confidence            999999999753

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1.5e-40  Score=276.61  Aligned_cols=231  Identities=23%  Similarity=0.334  Sum_probs=186.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-cchhhHhHHHHhccCCCCCCCceeEecCCCCH----HHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSYVHCDVTKE----KDIENA   82 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~----~~v~~~   82 (257)
                      .++++|++|||||++|||++++++|+++|++|++++| +.+.++++.+++....+  .++.++.+|++|+    ++++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~   84 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA--GSAVLCKGDLSLSSSLLDCCEDI   84 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSTTHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC--CceEEEeccCCCccccHHHHHHH
Confidence            3578899999999999999999999999999999999 88888877777754311  2488999999999    999999


Q ss_pred             HHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCH-----------HHHHHHHhhhchhhhHHHHHHHhh------------
Q 044485           83 VNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQ-----------AEFERILSINLVGAFLGRNMLLGV------------  139 (257)
Q Consensus        83 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~s~------------  139 (257)
                      ++++.+.++++|+||||||....  .++.+.+.           ++|++.+++|+.+++.+.+.+...            
T Consensus        85 ~~~~~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g  162 (276)
T 1mxh_A           85 IDCSFRAFGRCDVLVNNASAYYP--TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNL  162 (276)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCC--CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCE
T ss_pred             HHHHHHhcCCCCEEEECCCCCCC--CCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCc
Confidence            99999999999999999998754  56777888           999999999999999987766542            


Q ss_pred             --------hccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCC-
Q 044485          140 --------CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGA-  210 (257)
Q Consensus       140 --------~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-  210 (257)
                              .+..+.+....|++||++++.|+++++.|++++||++|+|+||+++|+ . ..........  ....+.++ 
T Consensus       163 ~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~~~~~~~~~--~~~~p~~r~  238 (276)
T 1mxh_A          163 SVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AMPQETQEEY--RRKVPLGQS  238 (276)
T ss_dssp             EEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SSCHHHHHHH--HTTCTTTSC
T ss_pred             EEEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cCCHHHHHHH--HhcCCCCCC
Confidence                    233455667789999999999999999999999999999999999998 2 1100000000  01244566 


Q ss_pred             CCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          211 VLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       211 ~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +.+|+|+|+.++||+++.+.+++|+.+.+|||..+.
T Consensus       239 ~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  274 (276)
T 1mxh_A          239 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILA  274 (276)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCHHHHHHHHHHHhCccccCccCcEEEECCchhcc
Confidence            889999999999999998899999999999998654

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=9.2e-42  Score=281.23  Aligned_cols=225  Identities=28%  Similarity=0.431  Sum_probs=173.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.   ..+++.      .++.++.+|++|+++++++++.+.
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~   75 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED---VVADLG------DRARFAAADVTDEAAVASALDLAE   75 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH---HHHHTC------TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH---HHHhcC------CceEEEECCCCCHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999996543   333331      248899999999999999999887


Q ss_pred             HHcCCccEEEeCCCCCCCCC--CCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhhc-----------------------c
Q 044485           88 TQYGKLDIMFNNAGTVDEVK--PNILDNDQAEFERILSINLVGAFLGRNMLLGVCG-----------------------I  142 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~~-----------------------~  142 (257)
                      + ++++|+||||||......  .+..+.+.++|++.+++|+.+++.+.+.+.....                       .
T Consensus        76 ~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tl3_A           76 T-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF  154 (257)
T ss_dssp             H-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--
T ss_pred             H-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc
Confidence            7 899999999999754210  1234588999999999999999999877754322                       2


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcccccc-CCCCCHHHHHHHH
Q 044485          143 IGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAA  221 (257)
Q Consensus       143 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~  221 (257)
                      .+.+....|++||+|+++|+++++.|++++||++|+|+||+++|++.+...........  ...+. +++.+|+|+|+.+
T Consensus       155 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~~~r~~~p~dva~~v  232 (257)
T 3tl3_A          155 DGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLG--KQVPHPSRLGNPDEYGALA  232 (257)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHH--HTSSSSCSCBCHHHHHHHH
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHH--hcCCCCCCccCHHHHHHHH
Confidence            22233457999999999999999999999999999999999999987654222111110  12344 6789999999999


Q ss_pred             HHhcCCCCCcccccEEEecCceeee
Q 044485          222 LYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       222 ~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +||+++  .+++|+++.+|||..+.
T Consensus       233 ~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          233 VHIIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHC--TTCCSCEEEESTTC---
T ss_pred             HHHhcC--CCCCCCEEEECCCccCC
Confidence            999986  68999999999998765

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.8e-40  Score=282.94  Aligned_cols=219  Identities=25%  Similarity=0.329  Sum_probs=187.5

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh-------hHhHHHHhccCCCCCCCceeEecCCCCHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-------GESVCKDIGSSSSSASGCSYVHCDVTKEKDIE   80 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~   80 (257)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++...+   .++.++.+|++|+++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g---~~~~~~~~Dv~d~~~v~  117 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG---GKALPCIVDVRDEQQIS  117 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTT---CEEEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcC---CeEEEEEccCCCHHHHH
Confidence            46899999999999999999999999999999999998764       445556665443   34889999999999999


Q ss_pred             HHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------hhcccc-
Q 044485           81 NAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------VCGIIG-  144 (257)
Q Consensus        81 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------~~~~~~-  144 (257)
                      ++++++.+.++++|+||||||+...  .++.+.+.++|++++++|+.+++++.+.+.+               ..+..+ 
T Consensus       118 ~~~~~~~~~~g~iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~  195 (346)
T 3kvo_A          118 AAVEKAIKKFGGIDILVNNASAISL--TNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV  195 (346)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC
Confidence            9999999999999999999998765  6788999999999999999999999887743               223333 


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCC-ccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHH
Q 044485          145 -GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYA-VSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL  222 (257)
Q Consensus       145 -~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  222 (257)
                       .+....|++||+|+++|++.++.|++ +||+||+|+||+ ++|++.+....          ..+.+++.+|+|+|++++
T Consensus       196 ~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~----------~~~~~r~~~pedvA~~v~  264 (346)
T 3kvo_A          196 WFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGG----------PGIESQCRKVDIIADAAY  264 (346)
T ss_dssp             GTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC------------CGGGCBCTHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhcc----------ccccccCCCHHHHHHHHH
Confidence             45677899999999999999999999 899999999995 99998764322          123456789999999999


Q ss_pred             HhcCCCCCcccccEEEecCcee
Q 044485          223 YLGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       223 ~l~s~~~~~~~G~~~~~dgG~~  244 (257)
                      ||+++ +.+++|+++ +|||..
T Consensus       265 ~L~s~-~~~itG~~i-vdgg~~  284 (346)
T 3kvo_A          265 SIFQK-PKSFTGNFV-IDENIL  284 (346)
T ss_dssp             HHHTS-CTTCCSCEE-EHHHHH
T ss_pred             HHHhc-CCCCCceEE-ECCcEe
Confidence            99999 889999998 999954

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=1.1e-40  Score=276.16  Aligned_cols=230  Identities=23%  Similarity=0.291  Sum_probs=187.8

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |..++.+|++|||||++|||+++|++|+++|++|++++|+.+.+++...         .++.++.+|++|++++++++++
T Consensus        10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~~~   80 (266)
T 3p19_A           10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL---------PNTLCAQVDVTDKYTFDTAITR   80 (266)
T ss_dssp             -----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCC---------TTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhc---------CCceEEEecCCCHHHHHHHHHH
Confidence            4556889999999999999999999999999999999999776544321         1378999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~  150 (257)
                      +.+.+|++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+....
T Consensus        81 ~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~  158 (266)
T 3p19_A           81 AEKIYGPADAIVNNAGMMLL--GQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAA  158 (266)
T ss_dssp             HHHHHCSEEEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCch
Confidence            99999999999999998765  67889999999999999999999987665               34556667778889


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++..................+.+++.+|+|+|++++||+++...
T Consensus       159 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~  238 (266)
T 3p19_A          159 YCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQN  238 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCC
Confidence            99999999999999999999999999999999999998754321110000000023567889999999999999999988


Q ss_pred             cccccEEEecCceeee
Q 044485          231 CVSGHNLVVDGGFAIV  246 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~  246 (257)
                      .+.++.+....+....
T Consensus       239 ~~~~~i~i~p~~~~~~  254 (266)
T 3p19_A          239 VCIREIALAPTKQQPK  254 (266)
T ss_dssp             EEEEEEEEEETTCCC-
T ss_pred             ccceeeEEecCCCCCc
Confidence            8888887777665443

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=3.6e-40  Score=275.10  Aligned_cols=228  Identities=26%  Similarity=0.459  Sum_probs=189.8

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.      .++.++.+|++|+++++++++++
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~   98 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG------NRAEFVSTNVTSEDSVLAAIEAA   98 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC------CceEEEEcCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999999999998888888773      24889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCC-----CCCCHHHHHHHHhhhchhhhHHHHHHH---------------------hhh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNI-----LDNDQAEFERILSINLVGAFLGRNMLL---------------------GVC  140 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------------s~~  140 (257)
                       +.++++|++|||++..... ..+     .+.+.++|++.+++|+.+++++.+.+.                     |..
T Consensus        99 -~~~~~id~lv~~aag~~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~  176 (281)
T 3ppi_A           99 -NQLGRLRYAVVAHGGFGVA-QRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIA  176 (281)
T ss_dssp             -TTSSEEEEEEECCCCCCCC-CCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGG
T ss_pred             -HHhCCCCeEEEccCccccc-ccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccc
Confidence             7889999999994433322 222     468899999999999999999876653                     344


Q ss_pred             ccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcccccc-CCCCCHHHHHH
Q 044485          141 GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAE  219 (257)
Q Consensus       141 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~  219 (257)
                      +..+.+....|++||+|+++|+++++.|++++||++++|+||+++|++.+..........  ....+. +++.+|+|+|+
T Consensus       177 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~~~~~~~pedvA~  254 (281)
T 3ppi_A          177 GYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKF--AANIPFPKRLGTPDEFAD  254 (281)
T ss_dssp             GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHH--HHTCCSSSSCBCHHHHHH
T ss_pred             ccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHH--HhcCCCCCCCCCHHHHHH
Confidence            555667778999999999999999999999999999999999999998765422111110  012333 67889999999


Q ss_pred             HHHHhcCCCCCcccccEEEecCceeee
Q 044485          220 AALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       220 ~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .++||+++  .+++|+++.+|||..+.
T Consensus       255 ~v~~l~s~--~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          255 AAAFLLTN--GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHHHC--SSCCSCEEEESTTCCCC
T ss_pred             HHHHHHcC--CCcCCcEEEECCCcccC
Confidence            99999985  67999999999998764

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=5.3e-41  Score=276.03  Aligned_cols=220  Identities=30%  Similarity=0.491  Sum_probs=175.4

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ..++.+|++|||||++|||++++++|+++|++|++++|+.+.++              ++.++.+|++|+++++++++++
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~Dl~d~~~v~~~~~~~   81 (253)
T 2nm0_A           16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE--------------GFLAVKCDITDTEQVEQAYKEI   81 (253)
T ss_dssp             ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------------TSEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc--------------cceEEEecCCCHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999865432              1678899999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh---------------hccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV---------------CGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~---------------~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.+.               .+..+.+....|
T Consensus        82 ~~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  159 (253)
T 2nm0_A           82 EETHGPVEVLIANAGVTKD--QLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANY  159 (253)
T ss_dssp             HHHTCSCSEEEEECSCCTT--TC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHH
Confidence            9999999999999998754  56788889999999999999999987766432               222233445689


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +++|+|++.|++.++.|++++||++|+|+||+++|++......   ...... ...+.+++.+|+|+|+.++||+++.+.
T Consensus       160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~  236 (253)
T 2nm0_A          160 AASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTD---EQRANIVSQVPLGRYARPEEIAATVRFLASDDAS  236 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCH---HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999999998654211   000001 123556789999999999999999999


Q ss_pred             cccccEEEecCceee
Q 044485          231 CVSGHNLVVDGGFAI  245 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~  245 (257)
                      +++|+.+.+|||..+
T Consensus       237 ~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          237 YITGAVIPVDGGLGM  251 (253)
T ss_dssp             TCCSCEEEESTTTTC
T ss_pred             CCcCcEEEECCcccc
Confidence            999999999999765

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=8.7e-40  Score=268.63  Aligned_cols=229  Identities=27%  Similarity=0.430  Sum_probs=191.4

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCc-eeEecCCCCHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGC-SYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~v~~~~~   84 (257)
                      |++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.      .++ .++.+|++|+++++++++
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   78 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG------AAVAARIVADVTDAEAMTAAAA   78 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG------GGEEEEEECCTTCHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------ccceeEEEEecCCHHHHHHHHH
Confidence            3457899999999999999999999999999999999999888877777662      125 789999999999999999


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCC-
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAAT-  148 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~-  148 (257)
                      ++.+ ++++|+||||||....  .++.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+.. 
T Consensus        79 ~~~~-~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  155 (254)
T 2wsb_A           79 EAEA-VAPVSILVNSAGIARL--HDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQF  155 (254)
T ss_dssp             HHHH-HSCCCEEEECCCCCCC--BCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSC
T ss_pred             HHHh-hCCCcEEEECCccCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCc
Confidence            9988 8999999999998754  567888999999999999999999877653               23344445555 


Q ss_pred             -chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcC
Q 044485          149 -HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       149 -~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                       ..|+++|++++.+++.++.|++++||++++|+||+++|++.+...... ....... ..+.+++.+|+|+|+.+++|++
T Consensus       156 ~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  234 (254)
T 2wsb_A          156 ASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERP-ELFETWLDMTPMGRCGEPSEIAAAALFLAS  234 (254)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCH-HHHHHHHHTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccCh-HHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence             789999999999999999999999999999999999999876432110 1001111 2345678899999999999999


Q ss_pred             CCCCcccccEEEecCcee
Q 044485          227 DESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~  244 (257)
                      +.+.+++|+.+.+|||..
T Consensus       235 ~~~~~~~G~~~~v~gG~~  252 (254)
T 2wsb_A          235 PAASYVTGAILAVDGGYT  252 (254)
T ss_dssp             GGGTTCCSCEEEESTTGG
T ss_pred             cccccccCCEEEECCCEe
Confidence            888899999999999964

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=6.1e-40  Score=271.10  Aligned_cols=222  Identities=27%  Similarity=0.376  Sum_probs=184.4

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|+++++++++++
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~  100 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG---GEAESHACDLSHSDAIAAFATGV  100 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC---CceeEEEecCCCHHHHHHHHHHH
Confidence            356889999999999999999999999999999999999999888888876543   34889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      .+.++++|+||||||..... .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|
T Consensus       101 ~~~~g~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  179 (262)
T 3rkr_A          101 LAAHGRCDVLVNNAGVGWFG-GPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAY  179 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCCS-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHH
T ss_pred             HHhcCCCCEEEECCCccCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchH
Confidence            99999999999999984322 578889999999999999999999987763               34455666777899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++||+|+++|+++++.|++++||++++|+||+++|++......          ..+..++.+|+|+|+.++||+++....
T Consensus       180 ~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~p~dvA~~v~~l~s~~~~~  249 (262)
T 3rkr_A          180 TASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA----------KKSALGAIEPDDIADVVALLATQADQS  249 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------CCCHHHHHHHHHHHHTCCTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc----------ccccccCCCHHHHHHHHHHHhcCcccc
Confidence            9999999999999999999999999999999999998765322          123356789999999999999999999


Q ss_pred             ccccEEEecCc
Q 044485          232 VSGHNLVVDGG  242 (257)
Q Consensus       232 ~~G~~~~~dgG  242 (257)
                      ++|+.+..+.+
T Consensus       250 ~~g~~~i~p~~  260 (262)
T 3rkr_A          250 FISEVLVRPTL  260 (262)
T ss_dssp             CEEEEEEECCC
T ss_pred             ccCcEEecccc
Confidence            99999887765

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=1.4e-39  Score=268.34  Aligned_cols=231  Identities=29%  Similarity=0.458  Sum_probs=192.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+   .++.++.+|++|+++++++++++.
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   85 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG---HDVSSVVMDVTNTESVQNAVRSVH   85 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999888777777765432   248899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCC--ch
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAAT--HA  150 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~--~~  150 (257)
                      +.++++|+||||||.... ..++.+.+.++|.+.+++|+.+++.+.+.+.               |..+..+.+..  ..
T Consensus        86 ~~~~~id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~  164 (260)
T 3awd_A           86 EQEGRVDILVACAGICIS-EVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAA  164 (260)
T ss_dssp             HHHSCCCEEEECCCCCCC-SCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHH
T ss_pred             HHcCCCCEEEECCCCCCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccc
Confidence            999999999999998652 1567889999999999999999999876653               23344444555  78


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH-hHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK-DFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      |+++|++++.|++.++.|++++||++++|+||+++|++.. ....  +.....+ ...+.+++.+|+|+|+.+++|+++.
T Consensus       165 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  242 (260)
T 3awd_A          165 YNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEK--PELYDAWIAGTPMGRVGQPDEVASVVQFLASDA  242 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTC--HHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCC--hHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999999999876 2210  0000111 1345567889999999999999988


Q ss_pred             CCcccccEEEecCcee
Q 044485          229 SKCVSGHNLVVDGGFA  244 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~  244 (257)
                      ..+++|+.+++|||..
T Consensus       243 ~~~~~G~~~~v~gg~~  258 (260)
T 3awd_A          243 ASLMTGAIVNVDAGFT  258 (260)
T ss_dssp             GTTCCSCEEEESTTTT
T ss_pred             hccCCCcEEEECCcee
Confidence            8889999999999964

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-40  Score=272.38  Aligned_cols=224  Identities=28%  Similarity=0.502  Sum_probs=175.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..      ++.++.+|+++.++++++++++ 
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~-   82 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKD------NYTIEVCNLANKEECSNLISKT-   82 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCS------SEEEEECCTTSHHHHHHHHHTC-
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhcc------CccEEEcCCCCHHHHHHHHHhc-
Confidence            468899999999999999999999999999999999999988888887742      3788999999999998877643 


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                         +++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|+
T Consensus        83 ---~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  157 (249)
T 3f9i_A           83 ---SNLDILVCNAGITSD--TLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYC  157 (249)
T ss_dssp             ---SCCSEEEECCC---------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHH
T ss_pred             ---CCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhH
Confidence               789999999998765  567788889999999999999999876652               444556677788999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      +||+|+++|+++++.|++++||++++|+||+++|++.+..........  ....+.+++..|+|+|++++||+++.+.++
T Consensus       158 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  235 (249)
T 3f9i_A          158 ASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAI--VQKIPLGTYGIPEDVAYAVAFLASNNASYI  235 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHH--HHHCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHH--HhcCCCCCCcCHHHHHHHHHHHcCCccCCc
Confidence            999999999999999999999999999999999998765422111110  113456788999999999999999999999


Q ss_pred             cccEEEecCceee
Q 044485          233 SGHNLVVDGGFAI  245 (257)
Q Consensus       233 ~G~~~~~dgG~~~  245 (257)
                      +|+.+++|||..+
T Consensus       236 tG~~~~vdgG~~~  248 (249)
T 3f9i_A          236 TGQTLHVNGGMLM  248 (249)
T ss_dssp             CSCEEEESTTSSC
T ss_pred             cCcEEEECCCEee
Confidence            9999999999875

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.1e-39  Score=267.29  Aligned_cols=225  Identities=27%  Similarity=0.389  Sum_probs=185.5

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|+++++++++++
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~~~~~~~~~~~~~   78 (247)
T 2jah_A            2 PSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG---AKVHVLELDVADRQGVDAAVAST   78 (247)
T ss_dssp             -CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999988888877775432   34889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~  152 (257)
                      .+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.              |..+..+.+....|+
T Consensus        79 ~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  156 (247)
T 2jah_A           79 VEALGGLDILVNNAGIMLL--GPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQ  156 (247)
T ss_dssp             HHHHSCCSEEEECCCCCCC--CCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTTCHHHH
T ss_pred             HHHcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCCCcHHH
Confidence            9999999999999998754  678899999999999999999999876653              334555667778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCC--CCHHHHHHHHHHhcCCCCC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAV--LEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~~l~s~~~~  230 (257)
                      +||+|+++|+++++.|++++||++|+|+||+++|++........  ........+ +++  .+|+|+|+.++||+++...
T Consensus       157 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~-~~~~~~~pedvA~~v~~l~s~~~~  233 (247)
T 2jah_A          157 ATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTA--TKEMYEQRI-SQIRKLQAQDIAEAVRYAVTAPHH  233 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHH--HHHHHHHHT-TTSCCBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchh--hHHHHHhcc-cccCCCCHHHHHHHHHHHhCCCcc
Confidence            99999999999999999999999999999999999865321100  000000112 344  8999999999999998877


Q ss_pred             cccccEEEec
Q 044485          231 CVSGHNLVVD  240 (257)
Q Consensus       231 ~~~G~~~~~d  240 (257)
                      +++++. .++
T Consensus       234 ~~~~~i-~i~  242 (247)
T 2jah_A          234 ATVHEI-FIR  242 (247)
T ss_dssp             EEEEEE-EEE
T ss_pred             CccceE-Eec
Confidence            777764 444

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=7.5e-40  Score=271.89  Aligned_cols=220  Identities=23%  Similarity=0.334  Sum_probs=170.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++.+|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++.+|++|+++++++++++.
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~   97 (272)
T 4dyv_A           24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG------DDALCVPTDVTDPDSVRALFTATV   97 (272)
T ss_dssp             ----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT------SCCEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC------CCeEEEEecCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999998888888774      238899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-----------------hhccccCCCCch
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-----------------VCGIIGGAATHA  150 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-----------------~~~~~~~~~~~~  150 (257)
                      +.+|++|+||||||..... .++.+.+.++|++.+++|+.+++.+.+.+..                 ..+..+.+....
T Consensus        98 ~~~g~iD~lVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~  176 (272)
T 4dyv_A           98 EKFGRVDVLFNNAGTGAPA-IPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAP  176 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCS-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHH
T ss_pred             HHcCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchH
Confidence            9999999999999986432 5688999999999999999999998776632                 334455666778


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      |++||+|+++|+|+++.|++++||++|+|+||+++|++.+.........   ....+.+++.+|+|+|++++||++....
T Consensus       177 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~---~~~~~~~~~~~pedvA~~v~fL~s~~~~  253 (272)
T 4dyv_A          177 YTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQA---DLSIKVEPVMDVAHVASAVVYMASLPLD  253 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---------------------------CHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhh---hhcccccCCCCHHHHHHHHHHHhCCCCc
Confidence            9999999999999999999999999999999999999876553322111   1134456788999999999999997655


Q ss_pred             cccccEE
Q 044485          231 CVSGHNL  237 (257)
Q Consensus       231 ~~~G~~~  237 (257)
                      ...++..
T Consensus       254 ~~~~~i~  260 (272)
T 4dyv_A          254 ANVQFMT  260 (272)
T ss_dssp             SCCCEEE
T ss_pred             CccceEE
Confidence            4444433

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.5e-39  Score=266.60  Aligned_cols=229  Identities=27%  Similarity=0.457  Sum_probs=190.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||++|||++++++|+++|++|++++|+.+.++++.+++....  +.++.++.+|++|+++++++++++.+.++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY--ADKVLRVRADVADEGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT--GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999999999999999988887777762211  13488999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCC---CCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           92 KLDIMFNNAGTVDEVKPN---ILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      ++|+||||||....  .+   +.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+....|++
T Consensus        80 ~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  157 (250)
T 2cfc_A           80 AIDVLVNNAGITGN--SEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTT  157 (250)
T ss_dssp             CCCEEEECCCCCCC--TTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCEEEECCCCCCC--CCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHH
Confidence            99999999998643  33   7788999999999999999998866652               3345556677789999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      +|++++.|++.++.|++++||++++|+||+++|++....... +...... ...+.+++.+|+|+|+.+++|+++...++
T Consensus       158 sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  236 (250)
T 2cfc_A          158 SKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQ-PELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYV  236 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTS-HHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcc
Confidence            999999999999999999999999999999999987642111 0000101 13455678899999999999999988899


Q ss_pred             cccEEEecCceee
Q 044485          233 SGHNLVVDGGFAI  245 (257)
Q Consensus       233 ~G~~~~~dgG~~~  245 (257)
                      +|+.+.+|||..+
T Consensus       237 ~G~~~~v~gG~~~  249 (250)
T 2cfc_A          237 NGAALVMDGAYTA  249 (250)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCCEEEECCceec
Confidence            9999999999753

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=1.4e-39  Score=269.30  Aligned_cols=232  Identities=26%  Similarity=0.413  Sum_probs=177.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+   .++.++.+|++|+++++++++++.
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   86 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG---FQVTGSVCDASLRPEREKLMQTVS   86 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeeEEEECCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999888887777765432   248899999999999999999999


Q ss_pred             HHc-CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           88 TQY-GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      +.+ +++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|
T Consensus        87 ~~~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  164 (266)
T 1xq1_A           87 SMFGGKLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIY  164 (266)
T ss_dssp             HHHTTCCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHH
T ss_pred             HHhCCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchH
Confidence            998 899999999998654  567888999999999999999999876663               33344455667789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +++|++++.|++.++.|++++||++++|+||+++|++......  +....... ..+.+++.+|+|+|+.+++|+++.+.
T Consensus       165 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  242 (266)
T 1xq1_A          165 SATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD--DEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAAS  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------CCGGGGHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            9999999999999999999999999999999999998764321  11111111 34556788999999999999998888


Q ss_pred             cccccEEEecCceeee
Q 044485          231 CVSGHNLVVDGGFAIV  246 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~  246 (257)
                      +++|+.+.+|||..+.
T Consensus       243 ~~~G~~~~v~gG~~~~  258 (266)
T 1xq1_A          243 YITGQTICVDGGLTVN  258 (266)
T ss_dssp             TCCSCEEECCCCEEET
T ss_pred             CccCcEEEEcCCcccc
Confidence            9999999999998764

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=6.8e-40  Score=266.63  Aligned_cols=212  Identities=19%  Similarity=0.213  Sum_probs=174.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++..      ++.++.+|++|+++++++++++.+.+
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~~~   75 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN------AVIGIVADLAHHEDVDVAFAAAVEWG   75 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC------CceEEECCCCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999999988888877732      38899999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhhhhHH
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~~sK~  156 (257)
                      +++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.              |..+..+.+....|++||+
T Consensus        76 g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKa  153 (235)
T 3l6e_A           76 GLPELVLHCAGTGEF--GPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKW  153 (235)
T ss_dssp             CSCSEEEEECCCC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHHHHHHHH
T ss_pred             CCCcEEEECCCCCCC--CChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcHHHHHHH
Confidence            999999999998654  678899999999999999999999987773              3345556667789999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCC-CCCccccc
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD-ESKCVSGH  235 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~-~~~~~~G~  235 (257)
                      |+++|+++++.|++++||++|+|+||+++|++......           .+..++.+|+|+|+.++|++++ ...+++|-
T Consensus       154 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----------~~~~~~~~pedvA~~v~~l~~~~~~~~i~~i  222 (235)
T 3l6e_A          154 GMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-----------VDPSGFMTPEDAAAYMLDALEARSSCHVTDL  222 (235)
T ss_dssp             HHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------CBCHHHHHHHHHHHTCCCSSEEEEEE
T ss_pred             HHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-----------CCCcCCCCHHHHHHHHHHHHhCCCCcceeeE
Confidence            99999999999999999999999999999998654321           1234678999999999999984 56677777


Q ss_pred             EEEecC
Q 044485          236 NLVVDG  241 (257)
Q Consensus       236 ~~~~dg  241 (257)
                      .+.-..
T Consensus       223 ~~~~~~  228 (235)
T 3l6e_A          223 FIGRNE  228 (235)
T ss_dssp             EEEECC
T ss_pred             EEecCC
Confidence            665443

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=2e-39  Score=271.20  Aligned_cols=230  Identities=30%  Similarity=0.448  Sum_probs=191.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++.+|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|+++++++++++.
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~d~~~v~~~~~~~~  116 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG---YESSGYAGDVSKKEEISEVINKIL  116 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC---CceeEEECCCCCHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999888888777775432   348899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|+
T Consensus       117 ~~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  194 (285)
T 2c07_A          117 TEHKNVDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYS  194 (285)
T ss_dssp             HHCSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHH
T ss_pred             HhcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHH
Confidence            999999999999998754  678889999999999999999999876663               333455667788999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      ++|++++.|++.++.|+++.||++++|+||+++|++............  ....+.+++.+|+|+|+.+++|+++...++
T Consensus       195 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~  272 (285)
T 2c07_A          195 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNI--ISNIPAGRMGTPEEVANLACFLSSDKSGYI  272 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHH--HTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHH--HhhCCCCCCCCHHHHHHHHHHHhCCCcCCC
Confidence            999999999999999999999999999999999998654211110000  012345678899999999999999988899


Q ss_pred             cccEEEecCcee
Q 044485          233 SGHNLVVDGGFA  244 (257)
Q Consensus       233 ~G~~~~~dgG~~  244 (257)
                      +|+.+.+|||..
T Consensus       273 ~G~~i~v~gG~~  284 (285)
T 2c07_A          273 NGRVFVIDGGLS  284 (285)
T ss_dssp             CSCEEEESTTSC
T ss_pred             CCCEEEeCCCcc
Confidence            999999999975

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=4.1e-39  Score=264.15  Aligned_cols=230  Identities=32%  Similarity=0.555  Sum_probs=193.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...    .++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~   78 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP----DQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc----CceEEEECCCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988887777776432    2488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhccccCCCCchhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIGGAATHAYT  152 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~~~~~~~y~  152 (257)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+..                ..+..+.+....|+
T Consensus        79 ~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  156 (251)
T 1zk4_A           79 AFGPVSTLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYN  156 (251)
T ss_dssp             HHSSCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccch
Confidence            99999999999998754  6688899999999999999999988766532                23344556677899


Q ss_pred             hhHHHHHHHHHHHHHHhc--cCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          153 SSKHGLLGLMKNTAVELG--RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~--~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      ++|++++.|++.++.|+.  ++||++++|+||+++|++........... ......+.+++.+|+|+|+.+++|+++...
T Consensus       157 ~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  235 (251)
T 1zk4_A          157 ASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAM-SQRTKTPMGHIGEPNDIAYICVYLASNESK  235 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHH-TSTTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhH-HHhhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            999999999999999998  88999999999999999876432110000 001134556788999999999999999888


Q ss_pred             cccccEEEecCceee
Q 044485          231 CVSGHNLVVDGGFAI  245 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~  245 (257)
                      +++|+.+.+|||..+
T Consensus       236 ~~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          236 FATGSEFVVDGGYTA  250 (251)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             cccCcEEEECCCccC
Confidence            999999999999753

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.2e-39  Score=267.67  Aligned_cols=237  Identities=25%  Similarity=0.477  Sum_probs=189.6

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCC----CCCCceeEecCCCCHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSS----SASGCSYVHCDVTKEKDIEN   81 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~~v~~   81 (257)
                      |..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.    ...++.++.+|++|++++++
T Consensus         1 m~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   80 (264)
T 2pd6_A            1 MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARC   80 (264)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHH
T ss_pred             CccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHH
Confidence            44568899999999999999999999999999999999998888777766643220    01348899999999999999


Q ss_pred             HHHHHHHHcCCc-cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhcccc
Q 044485           82 AVNTAVTQYGKL-DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIG  144 (257)
Q Consensus        82 ~~~~~~~~~~~i-d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~  144 (257)
                      +++++.+.++++ |+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+..                ..+..+
T Consensus        81 ~~~~~~~~~g~i~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  158 (264)
T 2pd6_A           81 LLEQVQACFSRPPSVVVSCAGITQD--EFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG  158 (264)
T ss_dssp             HHHHHHHHHSSCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC
T ss_pred             HHHHHHHHhCCCCeEEEECCCcCCC--cchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC
Confidence            999999999998 999999998754  5678889999999999999999998766533                224445


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHH
Q 044485          145 GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       145 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~  223 (257)
                      .+....|+++|++++.|++.++.|++++||++++|+||+++|++......   ....... ..+.+++.+|+|+|+.+++
T Consensus       159 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (264)
T 2pd6_A          159 NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ---KVVDKITEMIPMGHLGDPEDVADVVAF  235 (264)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------CTGGGCTTCSCBCHHHHHHHHHH
T ss_pred             CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH---HHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence            66778999999999999999999999999999999999999998654321   1111111 3455678899999999999


Q ss_pred             hcCCCCCcccccEEEecCceeeee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      ++++...+++|+.+.+|||..+..
T Consensus       236 l~~~~~~~~~G~~~~v~gg~~~~~  259 (264)
T 2pd6_A          236 LASEDSGYITGTSVEVTGGLFMAE  259 (264)
T ss_dssp             HHSGGGTTCCSCEEEESTTC----
T ss_pred             HcCCcccCCCCCEEEECCCceecc
Confidence            999888899999999999988753

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.8e-40  Score=273.41  Aligned_cols=227  Identities=22%  Similarity=0.325  Sum_probs=179.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+  ..+.++.+|++|+++++++++++.
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~  106 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG--NIVRAVVCDVGDPDQVAALFAAVR  106 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--CeEEEEEcCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999988888877754332  125889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------------hhhccccCCCCch
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------------GVCGIIGGAATHA  150 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------------s~~~~~~~~~~~~  150 (257)
                      +.+|++|+||||||.... ..++.+.+.++|++.+++|+.+++.+.+.+.                 |..+..+.+....
T Consensus       107 ~~~g~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~  185 (281)
T 4dry_A          107 AEFARLDLLVNNAGSNVP-PVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAP  185 (281)
T ss_dssp             HHHSCCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHH
T ss_pred             HHcCCCCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChh
Confidence            999999999999998643 2578899999999999999999999876653                 3445556677789


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.+.......   ......+.+++.+|+|+|++++||++....
T Consensus       186 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~~~pedvA~~v~fL~s~~~~  262 (281)
T 4dry_A          186 YTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVL---QANGEVAAEPTIPIEHIAEAVVYMASLPLS  262 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEE---CTTSCEEECCCBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhh---hhhhcccccCCCCHHHHHHHHHHHhCCCcc
Confidence            99999999999999999999999999999999999998765432211   111134456788999999999999997644


Q ss_pred             -cccccEEEec
Q 044485          231 -CVSGHNLVVD  240 (257)
Q Consensus       231 -~~~G~~~~~d  240 (257)
                       .+++.++...
T Consensus       263 ~~i~~~~i~p~  273 (281)
T 4dry_A          263 ANVLTMTVMAT  273 (281)
T ss_dssp             EEEEEEEEEET
T ss_pred             CccccEEEEec
Confidence             3455444433

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1.7e-39  Score=264.07  Aligned_cols=217  Identities=22%  Similarity=0.269  Sum_probs=185.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+  .++.++.+|++|+++++++++++.+.++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG--VEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--CeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            68999999999999999999999999999999999988888777642221  3488999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhhhhHHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYTSSKHG  157 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~~sK~a  157 (257)
                      ++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.              |..+..+.+....|+++|+|
T Consensus        80 ~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa  157 (235)
T 3l77_A           80 DVDVVVANAGLGYF--KRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWA  157 (235)
T ss_dssp             SCSEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCccccc--cCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHH
Confidence            99999999998765  778999999999999999999999987764              33444556667789999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEE
Q 044485          158 LLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNL  237 (257)
Q Consensus       158 ~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~  237 (257)
                      +++|++++  ++..+||++|+|+||+++|++.......          ....++.+|+|+|+.++||+++...+++|+.+
T Consensus       158 ~~~~~~~l--~~~~~~i~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~  225 (235)
T 3l77_A          158 ARALVRTF--QIENPDVRFFELRPGAVDTYFGGSKPGK----------PKEKGYLKPDEIAEAVRCLLKLPKDVRVEELM  225 (235)
T ss_dssp             HHHHHHHH--HHHCTTSEEEEEEECSBSSSTTTCCSCC----------CGGGTCBCHHHHHHHHHHHHTSCTTCCCCEEE
T ss_pred             HHHHHHHH--hhcCCCeEEEEEeCCccccccccccCCc----------ccccCCCCHHHHHHHHHHHHcCCCCCccceEE
Confidence            99999999  4447899999999999999986543221          11235789999999999999999999999999


Q ss_pred             EecCcee
Q 044485          238 VVDGGFA  244 (257)
Q Consensus       238 ~~dgG~~  244 (257)
                      ..|+|..
T Consensus       226 ~~~~~~~  232 (235)
T 3l77_A          226 LRSVYQR  232 (235)
T ss_dssp             ECCTTSC
T ss_pred             EeecccC
Confidence            9999863

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=3.6e-39  Score=268.35  Aligned_cols=239  Identities=49%  Similarity=0.837  Sum_probs=196.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...    .++.++.+|++|+++++++++++.
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~   87 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP----DVISFVHCDVTKDEDVRNLVDTTI   87 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC----CceEEEECCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988777777666431    148899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------hhccccCC-CCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------VCGIIGGA-ATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------~~~~~~~~-~~~~y  151 (257)
                      +.++++|+||||||.......++.+.+.++|++.+++|+.+++.+.+.+..               ..+..+.+ ....|
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y  167 (278)
T 2bgk_A           88 AKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVY  167 (278)
T ss_dssp             HHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHH
T ss_pred             HHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcch
Confidence            999999999999998654335678899999999999999999998776632               33334445 56789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcccc---CccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG---GMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      +++|++++.|++.++.|++++||++++|+||+++|++.............   .....+.+++.+|+|+|+.+++|+++.
T Consensus       168 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  247 (278)
T 2bgk_A          168 TATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDE  247 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999986543211000000   001223467899999999999999988


Q ss_pred             CCcccccEEEecCceeeeecce
Q 044485          229 SKCVSGHNLVVDGGFAIVNAGF  250 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~~~~~~  250 (257)
                      ..+++|+.+.+|||..++...+
T Consensus       248 ~~~~~G~~~~v~gg~~~~~~e~  269 (278)
T 2bgk_A          248 SKYVSGLNLVIDGGYTRTNPAF  269 (278)
T ss_dssp             GTTCCSCEEEESTTGGGCCTHH
T ss_pred             cccCCCCEEEECCcccccCCcc
Confidence            8899999999999988765444

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=2.9e-39  Score=264.50  Aligned_cols=232  Identities=28%  Similarity=0.448  Sum_probs=192.6

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++....  +.++.++.+|++|++++++++++
T Consensus         1 m~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   78 (248)
T 2pnf_A            1 MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY--GVKAHGVEMNLLSEESINKAFEE   78 (248)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--CCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc--CCceEEEEccCCCHHHHHHHHHH
Confidence            3456889999999999999999999999999999999999888777766654311  12388899999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~  150 (257)
                      +.+.++++|+||||||....  .++.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+....
T Consensus        79 ~~~~~~~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  156 (248)
T 2pnf_A           79 IYNLVDGIDILVNNAGITRD--KLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVN  156 (248)
T ss_dssp             HHHHSSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHH
T ss_pred             HHHhcCCCCEEEECCCCCCC--CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCch
Confidence            99999999999999998754  567788999999999999999998866552               3345556677889


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      |+++|++++.|++.++.|++++||++++|+||+++|++.............  ...+.+++.+|+|+|+.+++++++...
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~l~~~~~~  234 (248)
T 2pnf_A          157 YSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYK--EQIPLGRFGSPEEVANVVLFLCSELAS  234 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHH--HTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHH--hcCCCCCccCHHHHHHHHHHHhCchhh
Confidence            999999999999999999999999999999999999986542111000000  023456788999999999999998888


Q ss_pred             cccccEEEecCce
Q 044485          231 CVSGHNLVVDGGF  243 (257)
Q Consensus       231 ~~~G~~~~~dgG~  243 (257)
                      +++|+.+.+|||.
T Consensus       235 ~~~G~~~~v~gg~  247 (248)
T 2pnf_A          235 YITGEVIHVNGGM  247 (248)
T ss_dssp             TCCSCEEEESTTC
T ss_pred             cCCCcEEEeCCCc
Confidence            8999999999996

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.7e-39  Score=287.03  Aligned_cols=226  Identities=27%  Similarity=0.422  Sum_probs=186.5

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch--hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD--LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+..  .+++..++..        +.++.+|++|++++++++++
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~--------~~~~~~Dvtd~~~v~~~~~~  280 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVG--------GTALTLDVTADDAVDKITAH  280 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHT--------CEEEECCTTSTTHHHHHHHH
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC--------CeEEEEecCCHHHHHHHHHH
Confidence            3568999999999999999999999999999999998753  2333333331        67899999999999999999


Q ss_pred             HHHHcCC-ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCc
Q 044485           86 AVTQYGK-LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATH  149 (257)
Q Consensus        86 ~~~~~~~-id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~  149 (257)
                      +.+.+++ +|+||||||+...  ..+.+.+.++|++.+++|+.+++++.+.+               +|..+..+.++..
T Consensus       281 ~~~~~g~~id~lV~nAGv~~~--~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~  358 (454)
T 3u0b_A          281 VTEHHGGKVDILVNNAGITRD--KLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQT  358 (454)
T ss_dssp             HHHHSTTCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCH
T ss_pred             HHHHcCCCceEEEECCcccCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCH
Confidence            9999986 9999999998765  77889999999999999999999997766               3556667788899


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      .|++||+++++|+++++.|++++||++|+|+||+++|++.........+...  ...+.++..+|+|+|+.++||+++.+
T Consensus       359 ~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~--~~~~l~r~g~pedvA~~v~fL~s~~a  436 (454)
T 3u0b_A          359 NYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGR--RLNSLFQGGQPVDVAELIAYFASPAS  436 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHH--HSBTTSSCBCHHHHHHHHHHHHCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHH--hhccccCCCCHHHHHHHHHHHhCCcc
Confidence            9999999999999999999999999999999999999987654322111110  12345677899999999999999999


Q ss_pred             CcccccEEEecCceee
Q 044485          230 KCVSGHNLVVDGGFAI  245 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~  245 (257)
                      .++||+++.+|||..+
T Consensus       437 ~~itG~~i~vdGG~~l  452 (454)
T 3u0b_A          437 NAVTGNTIRVCGQAML  452 (454)
T ss_dssp             TTCCSCEEEESSSBSC
T ss_pred             CCCCCcEEEECCcccc
Confidence            9999999999999865

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=2.5e-39  Score=264.42  Aligned_cols=226  Identities=28%  Similarity=0.363  Sum_probs=185.2

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |++++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.       .+.++.+|++|+++++++++ 
T Consensus         1 M~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~-   72 (244)
T 3d3w_A            1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-------GIEPVCVDLGDWEATERALG-   72 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-------TCEEEECCTTCHHHHHHHHT-
T ss_pred             CccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-------CCCEEEEeCCCHHHHHHHHH-
Confidence            4567899999999999999999999999999999999999887777666542       15677999999999988876 


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhccccCCCCc
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIGGAATH  149 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~~~~~~  149 (257)
                         .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+..                ..+..+.+...
T Consensus        73 ---~~~~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  147 (244)
T 3d3w_A           73 ---SVGPVDLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHS  147 (244)
T ss_dssp             ---TCCCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBH
T ss_pred             ---HcCCCCEEEECCccCCC--cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCc
Confidence               56789999999998654  5678889999999999999999998665532                23334456667


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      .|++||++++.|++.+++|++++||++++|+||+++|++........ .....+. ..+.+++.+|+|+|+.+++++++.
T Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (244)
T 3d3w_A          148 VYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDP-HKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCST-THHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccCh-HHHHHHHhhCCCCCCcCHHHHHHHHHHHcCcc
Confidence            89999999999999999999999999999999999999865432110 0000111 345567899999999999999988


Q ss_pred             CCcccccEEEecCceee
Q 044485          229 SKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~  245 (257)
                      ..+++|+.+.+|||..+
T Consensus       227 ~~~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          227 SGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             ccCCCCCEEEECCCccC
Confidence            88899999999999753

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=2.3e-39  Score=265.07  Aligned_cols=229  Identities=28%  Similarity=0.487  Sum_probs=173.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEe-eCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++++|++|||||++|||++++++|+++|++|+++ .|+.+.+++..+++...+   .++.++.+|++|+++++++++++.
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG---INVVVAKGDVKNPEDVENMVKTAM   78 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTT---CCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999998 677777777766665432   348899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|+||||||....  .++.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+....|+
T Consensus        79 ~~~~~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  156 (247)
T 2hq1_A           79 DAFGRIDILVNNAGITRD--TLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYA  156 (247)
T ss_dssp             HHHSCCCEEEECC-----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHH
T ss_pred             HhcCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhH
Confidence            999999999999998654  567788889999999999999999876653               223445566778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      ++|++++.|++.++.|++++||++++|+||+++|++.............  ...+.+++.+|+|+|+.+++++++...++
T Consensus       157 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~l~~~~~~~~  234 (247)
T 2hq1_A          157 ASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYL--NNIPLKRFGTPEEVANVVGFLASDDSNYI  234 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHH--TTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHH--hhCCCCCCCCHHHHHHHHHHHcCcccccc
Confidence            9999999999999999999999999999999999986542111100000  12345678899999999999999888889


Q ss_pred             cccEEEecCcee
Q 044485          233 SGHNLVVDGGFA  244 (257)
Q Consensus       233 ~G~~~~~dgG~~  244 (257)
                      +|+.+++|||..
T Consensus       235 ~G~~~~v~gG~~  246 (247)
T 2hq1_A          235 TGQVINIDGGLV  246 (247)
T ss_dssp             CSCEEEESTTC-
T ss_pred             cCcEEEeCCCcc
Confidence            999999999975

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=3.2e-39  Score=273.60  Aligned_cols=240  Identities=20%  Similarity=0.200  Sum_probs=182.6

Q ss_pred             cccccCCcEEEEecC--CCchHHHHHHHHHHcCCeEEEeeCcch-----------hhHhHHHHhccCCCCCCCceeEe--
Q 044485            6 MLRRLQGKVALITGG--ARGIGECTARLFSKHGAKVLIADIKDD-----------LGESVCKDIGSSSSSASGCSYVH--   70 (257)
Q Consensus         6 ~~~~~~~k~~lItGa--s~giG~~ia~~l~~~g~~Vi~~~r~~~-----------~~~~~~~~~~~~~~~~~~v~~~~--   70 (257)
                      |.+++++|++|||||  ++|||+++|++|+++|++|++++|++.           .+++. +++.. +.....+.++.  
T Consensus         3 ~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~d   80 (315)
T 2o2s_A            3 FPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPD-GSLIEFAGVYPLD   80 (315)
T ss_dssp             -CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTT-SCBCCCSCEEECC
T ss_pred             CcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhc-ccccccccccccc
Confidence            455789999999999  899999999999999999999998641           12222 22211 11000023333  


Q ss_pred             ----------cCCCC--------HHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHH
Q 044485           71 ----------CDVTK--------EKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG  132 (257)
Q Consensus        71 ----------~D~~~--------~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l  132 (257)
                                +|++|        +++++++++++.+.+|++|+||||||+......++.+.+.++|++.+++|+.+++.+
T Consensus        81 ~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l  160 (315)
T 2o2s_A           81 AAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSL  160 (315)
T ss_dssp             TTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             ccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHH
Confidence                      33443        668999999999999999999999997642225688899999999999999999999


Q ss_pred             HHHHH-------------hhhccccCCCC-chhhhhHHHHHHHHHHHHHHhcc-CCcEEEeecCCCccChhhHhHhhhhh
Q 044485          133 RNMLL-------------GVCGIIGGAAT-HAYTSSKHGLLGLMKNTAVELGR-FGIRVNCVSPYAVSTPLAKDFLKLAD  197 (257)
Q Consensus       133 ~~~~~-------------s~~~~~~~~~~-~~y~~sK~a~~~~~~~l~~e~~~-~gi~v~~i~pg~v~t~~~~~~~~~~~  197 (257)
                      .+.+.             |..+..+.+.. ..|++||+|+++|+++++.|+++ +||+||+|+||+++|++.........
T Consensus       161 ~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~  240 (315)
T 2o2s_A          161 LQHFGPIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGE  240 (315)
T ss_dssp             HHHHSTTEEEEEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSS
T ss_pred             HHHHHHHHhcCCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcccccc
Confidence            88774             33444555666 58999999999999999999985 89999999999999998654321000


Q ss_pred             c-cccC----c-cccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeee
Q 044485          198 D-GLGG----M-YSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       198 ~-~~~~----~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      . ....    . ...|.+++.+|+|+|+.++||+++.+.+++|+++.+|||..+..
T Consensus       241 ~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  296 (315)
T 2o2s_A          241 KSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMG  296 (315)
T ss_dssp             SCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCS
T ss_pred             chhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeeec
Confidence            0 0000    0 12466788999999999999999999999999999999987643

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-38  Score=267.46  Aligned_cols=241  Identities=24%  Similarity=0.380  Sum_probs=196.9

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCC--CCCCceeEecCCCCHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSS--SASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      +..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.....  ...++.++.+|++|++++++++
T Consensus        12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   91 (303)
T 1yxm_A           12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   91 (303)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence            34468899999999999999999999999999999999999888887777654210  1235889999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh--------------hhccccCCCCc
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG--------------VCGIIGGAATH  149 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s--------------~~~~~~~~~~~  149 (257)
                      +++.+.++++|+||||||....  .++.+.+.+++++.+++|+.+++.+.+.+..              .....+.+...
T Consensus        92 ~~~~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  169 (303)
T 1yxm_A           92 KSTLDTFGKINFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAV  169 (303)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTTCH
T ss_pred             HHHHHHcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCCCcch
Confidence            9999999999999999997643  5677889999999999999999998776533              11133456677


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhh-hhhccccCcc-ccccCCCCCHHHHHHHHHHhcCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLK-LADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      .|+++|+++..|++.++.|+.++||++++|+||+++|++...... .......... ..+.+++.+|+|+|+.+++|+++
T Consensus       170 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~  249 (303)
T 1yxm_A          170 HSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSP  249 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCc
Confidence            899999999999999999999999999999999999995321111 1111111222 34567789999999999999999


Q ss_pred             CCCcccccEEEecCceeeeec
Q 044485          228 ESKCVSGHNLVVDGGFAIVNA  248 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~~~~  248 (257)
                      ...+++|+.+.+|||..+...
T Consensus       250 ~~~~~~G~~~~v~gG~~~~~~  270 (303)
T 1yxm_A          250 AASFITGQSVDVDGGRSLYTH  270 (303)
T ss_dssp             GGTTCCSCEEEESTTGGGCBT
T ss_pred             ccccCCCcEEEECCCeecccc
Confidence            888999999999999877643

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=1.2e-38  Score=261.81  Aligned_cols=231  Identities=32%  Similarity=0.440  Sum_probs=193.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+   .++.++.+|++|+++++++++++.
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   83 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG---GQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC---CceEEEEcCCCCHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999999888877777775433   248889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|+||||||....  .++ +.+.+++++.+++|+.+++++.+.+.               |..+..+.++...|+
T Consensus        84 ~~~~~~d~vi~~Ag~~~~--~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  160 (255)
T 1fmc_A           84 SKLGKVDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA  160 (255)
T ss_dssp             HHHSSCCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             HhcCCCCEEEECCCCCCC--CCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccH
Confidence            999999999999998654  344 78899999999999999999876653               333444556677899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++|++++.|++.++.|++++||++++|+||++.|++......  +...... ...+.+++++|+|+|+.+++|+++.+.+
T Consensus       161 ~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  238 (255)
T 1fmc_A          161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT--PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASW  238 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC--HHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccC--hHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCcccc
Confidence            999999999999999999999999999999999998654211  0000011 1345567889999999999999988888


Q ss_pred             ccccEEEecCceeee
Q 044485          232 VSGHNLVVDGGFAIV  246 (257)
Q Consensus       232 ~~G~~~~~dgG~~~~  246 (257)
                      ++|+.+++|||..++
T Consensus       239 ~~G~~~~v~gg~~~s  253 (255)
T 1fmc_A          239 VSGQILTVSGGGVQE  253 (255)
T ss_dssp             CCSCEEEESTTSCCC
T ss_pred             CCCcEEEECCceecc
Confidence            999999999997654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-39  Score=266.56  Aligned_cols=233  Identities=24%  Similarity=0.313  Sum_probs=189.0

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++....+  .++.++.+|++|+++++++++++
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~   86 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG--VKTKAYQCDVSNTDIVTKTIQQI   86 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT--CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcC--CeeEEEEeeCCCHHHHHHHHHHH
Confidence            4468899999999999999999999999999999999977665555554432111  24889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh----------------hccccCCC---
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV----------------CGIIGGAA---  147 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~----------------~~~~~~~~---  147 (257)
                      .+.++++|+||||||....  .++.+.+.+++++.+++|+.+++.+.+.+...                .+..+.+.   
T Consensus        87 ~~~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  164 (265)
T 1h5q_A           87 DADLGPISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN  164 (265)
T ss_dssp             HHHSCSEEEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETT
T ss_pred             HHhcCCCCEEEECCCcCCC--CchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccc
Confidence            9999999999999998754  56788899999999999999999987766322                12222211   


Q ss_pred             ----CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHH
Q 044485          148 ----THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       148 ----~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  223 (257)
                          ...|+++|++++.|++.++.|++++||++++|+||+++|++...........+.  ...+.+++.+|+|+|+.+++
T Consensus       165 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~  242 (265)
T 1h5q_A          165 GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQA--SNIPLNRFAQPEEMTGQAIL  242 (265)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHH--HTCTTSSCBCGGGGHHHHHH
T ss_pred             ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHH--hcCcccCCCCHHHHHHHHHh
Confidence                568999999999999999999999999999999999999987643111100000  12345678899999999999


Q ss_pred             hcCCCCCcccccEEEecCceee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      |+++.+.+++|+.+.+|||..+
T Consensus       243 l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          243 LLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             HHSGGGTTCCSCEEEECTTGGG
T ss_pred             hccCchhcCcCcEEEecCCEeC
Confidence            9999888999999999999753

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=6e-39  Score=262.12  Aligned_cols=226  Identities=28%  Similarity=0.480  Sum_probs=188.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEE-eeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~-~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      +|++|||||++|||++++++|+++|++|++ .+|+.+..+++.+++...+   .++.++.+|++|+++++++++++.+.+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG---GQAITFGGDVSKEADVEAMMKTAIDAW   77 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT---CEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            589999999999999999999999999988 4788877777766664332   247889999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhH
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK  155 (257)
                      +++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|+++|
T Consensus        78 g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (244)
T 1edo_A           78 GTIDVVVNNAGITRD--TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAK  155 (244)
T ss_dssp             SCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--cCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhH
Confidence            999999999998754  567888999999999999999999876663               333455667788999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhc-CCCCCcccc
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG-SDESKCVSG  234 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~-s~~~~~~~G  234 (257)
                      ++++.|++.++.|++++||++++|+||+++|++............  ....+.+++.+|+|+|+.+++|+ ++...+++|
T Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G  233 (244)
T 1edo_A          156 AGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKI--LGTIPLGRTGQPENVAGLVEFLALSPAASYITG  233 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHH--HTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCS
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHH--hhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCC
Confidence            999999999999999999999999999999998764321111000  01235567889999999999999 777788999


Q ss_pred             cEEEecCcee
Q 044485          235 HNLVVDGGFA  244 (257)
Q Consensus       235 ~~~~~dgG~~  244 (257)
                      +.+.+|||..
T Consensus       234 ~~~~v~gG~~  243 (244)
T 1edo_A          234 QAFTIDGGIA  243 (244)
T ss_dssp             CEEEESTTTT
T ss_pred             CEEEeCCCcc
Confidence            9999999964

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=2.4e-39  Score=261.33  Aligned_cols=206  Identities=24%  Similarity=0.249  Sum_probs=171.9

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+                       +|++|+++++++++++ 
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----------------------~D~~~~~~v~~~~~~~-   57 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-----------------------LDISDEKSVYHYFETI-   57 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-----------------------CCTTCHHHHHHHHHHH-
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-----------------------cCCCCHHHHHHHHHHh-
Confidence            4678999999999999999999999999999999998764                       7999999999988754 


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchhhhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYTSS  154 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y~~s  154 (257)
                         +++|+||||||..... .++.+.+.++|++.+++|+.+++.+.+.+.             |..+..+.+....|+++
T Consensus        58 ---g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~as  133 (223)
T 3uce_A           58 ---GAFDHLIVTAGSYAPA-GKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAI  133 (223)
T ss_dssp             ---CSEEEEEECCCCCCCC-SCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             ---CCCCEEEECCCCCCCC-CCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHH
Confidence               8999999999987432 678899999999999999999999988773             44556667778899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc-ccCc-cccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG-LGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      |+|++.|+++++.|+++  ||+|+|+||+++|++.+......... .... ...|.+++.+|+|+|++++||++  +.++
T Consensus       134 K~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~--~~~~  209 (223)
T 3uce_A          134 NAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQ--NSYM  209 (223)
T ss_dssp             HHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHH--CTTC
T ss_pred             HHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHcc--CCCC
Confidence            99999999999999987  99999999999999875432221111 1111 14566788999999999999997  4689


Q ss_pred             cccEEEecCceee
Q 044485          233 SGHNLVVDGGFAI  245 (257)
Q Consensus       233 ~G~~~~~dgG~~~  245 (257)
                      +|+++.+|||..+
T Consensus       210 tG~~i~vdgG~~~  222 (223)
T 3uce_A          210 TGTVIDVDGGALL  222 (223)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             CCcEEEecCCeec
Confidence            9999999999865

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=1.6e-39  Score=273.19  Aligned_cols=240  Identities=20%  Similarity=0.219  Sum_probs=181.8

Q ss_pred             cccccCCcEEEEecCC--CchHHHHHHHHHHcCCeEEEeeCcch-----------hhHhHHHHhccCCCCCCCceeEec-
Q 044485            6 MLRRLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDD-----------LGESVCKDIGSSSSSASGCSYVHC-   71 (257)
Q Consensus         6 ~~~~~~~k~~lItGas--~giG~~ia~~l~~~g~~Vi~~~r~~~-----------~~~~~~~~~~~~~~~~~~v~~~~~-   71 (257)
                      |.+++++|++|||||+  +|||+++|++|+++|++|++++|+..           .+++. +++.. .........+.+ 
T Consensus         2 ~~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~   79 (297)
T 1d7o_A            2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPD-GSLMEIKKVYPLD   79 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT-SSBCCEEEEEEEC
T ss_pred             CccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcc-ccccccccccccc
Confidence            4567899999999999  99999999999999999999987531           22221 12211 000000122233 


Q ss_pred             -----------CCCC--------HHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHH
Q 044485           72 -----------DVTK--------EKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG  132 (257)
Q Consensus        72 -----------D~~~--------~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l  132 (257)
                                 |++|        +++++++++++.+.++++|+||||||+......++.+.+.++|++.+++|+.+++++
T Consensus        80 ~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l  159 (297)
T 1d7o_A           80 AVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSL  159 (297)
T ss_dssp             TTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             eeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHH
Confidence                       2332        678999999999999999999999997542235678899999999999999999999


Q ss_pred             HHHHHh-------------hhccccCCCC-chhhhhHHHHHHHHHHHHHHhcc-CCcEEEeecCCCccChhhHhHhhhhh
Q 044485          133 RNMLLG-------------VCGIIGGAAT-HAYTSSKHGLLGLMKNTAVELGR-FGIRVNCVSPYAVSTPLAKDFLKLAD  197 (257)
Q Consensus       133 ~~~~~s-------------~~~~~~~~~~-~~y~~sK~a~~~~~~~l~~e~~~-~gi~v~~i~pg~v~t~~~~~~~~~~~  197 (257)
                      .+.+.+             ..+..+.+.. ..|++||+|+++|+++++.|+++ +||+||+|+||+++|++.+..... +
T Consensus       160 ~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~-~  238 (297)
T 1d7o_A          160 LSHFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI-D  238 (297)
T ss_dssp             HHHHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH-H
T ss_pred             HHHHHHHhccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcccc-H
Confidence            887743             3444556666 68999999999999999999985 899999999999999986532100 0


Q ss_pred             ccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeeec
Q 044485          198 DGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA  248 (257)
Q Consensus       198 ~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~~  248 (257)
                      ...... ...|.+++.+|+|+|+.++||+++.+.+++|+.+.+|||..+...
T Consensus       239 ~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~~~  290 (297)
T 1d7o_A          239 TMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGV  290 (297)
T ss_dssp             HHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSS
T ss_pred             HHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceeecC
Confidence            000001 134567788999999999999999999999999999999877543

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=4.7e-39  Score=265.31  Aligned_cols=230  Identities=19%  Similarity=0.241  Sum_probs=186.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHH---cCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSK---HGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~---~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      +++++|++|||||++|||++++++|++   +|++|++++|+.+.++++.+++....+ +.++.++.+|++|+++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~   80 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP-DLKVVLAAADLGTEAGVQRLLS   80 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT-TSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCC-CCeEEEEecCCCCHHHHHHHHH
Confidence            467899999999999999999999999   899999999999888888777754211 1348899999999999999999


Q ss_pred             HHHH--HcCCcc--EEEeCCCCCCCCCCCCCC-CCHHHHHHHHhhhchhhhHHHHHHHhh-----------------hcc
Q 044485           85 TAVT--QYGKLD--IMFNNAGTVDEVKPNILD-NDQAEFERILSINLVGAFLGRNMLLGV-----------------CGI  142 (257)
Q Consensus        85 ~~~~--~~~~id--~lv~~ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~s~-----------------~~~  142 (257)
                      ++.+  .++++|  +||||||.......++.+ .+.++|++.+++|+.+++++.+.+.+.                 .+.
T Consensus        81 ~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
T 1oaa_A           81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL  160 (259)
T ss_dssp             HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred             HHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc
Confidence            9988  678899  999999986432235666 789999999999999999997776432                 334


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh--hhccccCcc-ccccCCCCCHHHHHH
Q 044485          143 IGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL--ADDGLGGMY-SNLKGAVLEPEDAAE  219 (257)
Q Consensus       143 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~a~  219 (257)
                      .+.+....|++||+|+++|+++++.|+++  |+||+|+||+++|++.+.....  .+.....+. ..|.+++.+|+|+|+
T Consensus       161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~  238 (259)
T 1oaa_A          161 QPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQ  238 (259)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHH
Confidence            45566778999999999999999999974  9999999999999987654221  010000111 234577899999999


Q ss_pred             HHHHhcCCCCCcccccEEEecC
Q 044485          220 AALYLGSDESKCVSGHNLVVDG  241 (257)
Q Consensus       220 ~~~~l~s~~~~~~~G~~~~~dg  241 (257)
                      .++||+++ ..+++|+++.+||
T Consensus       239 ~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          239 KLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHHH-CCSCTTEEEETTC
T ss_pred             HHHHHHhh-ccccCCcEEeccC
Confidence            99999986 6889999999986

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=1.7e-39  Score=275.79  Aligned_cols=242  Identities=22%  Similarity=0.248  Sum_probs=156.7

Q ss_pred             cccccCCcEEEEecC--CCchHHHHHHHHHHcCCeEEEeeCcc-----------hhhH-----------hHHHHhccCCC
Q 044485            6 MLRRLQGKVALITGG--ARGIGECTARLFSKHGAKVLIADIKD-----------DLGE-----------SVCKDIGSSSS   61 (257)
Q Consensus         6 ~~~~~~~k~~lItGa--s~giG~~ia~~l~~~g~~Vi~~~r~~-----------~~~~-----------~~~~~~~~~~~   61 (257)
                      |.+++++|++|||||  ++|||+++|++|+++|++|++++|++           +.++           ++.+++...+.
T Consensus         3 ~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (319)
T 2ptg_A            3 LPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV   82 (319)
T ss_dssp             CCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC------------------------------
T ss_pred             cccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc
Confidence            445789999999999  89999999999999999999998753           1111           12223322111


Q ss_pred             CCCCceeEec------------CCCC--------HHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHH
Q 044485           62 SASGCSYVHC------------DVTK--------EKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERI  121 (257)
Q Consensus        62 ~~~~v~~~~~------------D~~~--------~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~  121 (257)
                      ....+.++.+            |++|        +++++++++++.+.++++|+||||||+......++.+.+.++|++.
T Consensus        83 ~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~  162 (319)
T 2ptg_A           83 DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAA  162 (319)
T ss_dssp             --CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHH
T ss_pred             cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHH
Confidence            0000233333            3333        4589999999999999999999999975322257888999999999


Q ss_pred             HhhhchhhhHHHHHHHhh-------------hccccCCCC-chhhhhHHHHHHHHHHHHHHhcc-CCcEEEeecCCCccC
Q 044485          122 LSINLVGAFLGRNMLLGV-------------CGIIGGAAT-HAYTSSKHGLLGLMKNTAVELGR-FGIRVNCVSPYAVST  186 (257)
Q Consensus       122 ~~~n~~~~~~l~~~~~s~-------------~~~~~~~~~-~~y~~sK~a~~~~~~~l~~e~~~-~gi~v~~i~pg~v~t  186 (257)
                      +++|+.+++++.+.+.+.             .+..+.+.. ..|++||+|+++|+|+|+.|+++ +|||||+|+||+++|
T Consensus       163 ~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T  242 (319)
T 2ptg_A          163 VSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKS  242 (319)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-
T ss_pred             HhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccC
Confidence            999999999998887543             333445555 58999999999999999999985 899999999999999


Q ss_pred             hhhHhHhhhhh-ccc----cCc-cccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeee
Q 044485          187 PLAKDFLKLAD-DGL----GGM-YSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       187 ~~~~~~~~~~~-~~~----~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      ++.+....... ...    ... ...|.+++.+|+|+|+.++||+++.+.+++|+++.+|||..+..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  309 (319)
T 2ptg_A          243 RAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAMG  309 (319)
T ss_dssp             ------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC-
T ss_pred             hhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceeec
Confidence            98754321100 000    001 13466788999999999999999999999999999999987654

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=2.1e-38  Score=262.00  Aligned_cols=226  Identities=28%  Similarity=0.475  Sum_probs=184.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.      .++.++.+|++|+++++++++++.
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~   81 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG------NNCVFAPADVTSEKDVQTALALAK   81 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC------TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhC------CceEEEEcCCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999888887777762      248899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCC------CCCHHHHHHHHhhhchhhhHHHHHHHhh---------------------h
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNIL------DNDQAEFERILSINLVGAFLGRNMLLGV---------------------C  140 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~s~---------------------~  140 (257)
                      +.++++|+||||||....  .++.      +.+.++|++.+++|+.+++.+.+.+...                     .
T Consensus        82 ~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~  159 (265)
T 2o23_A           82 GKFGRVDVAVNCAGIAVA--SKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVA  159 (265)
T ss_dssp             HHHSCCCEEEECCCCCCC--CCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTH
T ss_pred             HHCCCCCEEEECCccCCC--CccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChh
Confidence            999999999999998654  3333      3789999999999999999987766433                     2


Q ss_pred             ccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-cccc-CCCCCHHHHH
Q 044485          141 GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLK-GAVLEPEDAA  218 (257)
Q Consensus       141 ~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~a  218 (257)
                      +..+.+....|+++|++++.|++.++.|++++||++++|+||+++|++.......   ...... ..+. +++.+|+|+|
T Consensus       160 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dva  236 (265)
T 2o23_A          160 AFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK---VCNFLASQVPFPSRLGDPAEYA  236 (265)
T ss_dssp             HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHTCSSSCSCBCHHHHH
T ss_pred             hcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHH---HHHHHHHcCCCcCCCCCHHHHH
Confidence            3344566778999999999999999999999999999999999999986543211   111111 2344 6788999999


Q ss_pred             HHHHHhcCCCCCcccccEEEecCceeee
Q 044485          219 EAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       219 ~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +.+++|++  ..+++|+.+.+|||..+.
T Consensus       237 ~~~~~l~~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          237 HLVQAIIE--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             HHHHHHHH--CTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHhh--cCccCceEEEECCCEecC
Confidence            99999995  467999999999998764

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.2e-39  Score=266.49  Aligned_cols=229  Identities=22%  Similarity=0.279  Sum_probs=177.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|+++++++++++.+
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG---GQCVPVVCDSSQESEVRSLFEQVDR   78 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS---SEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC---CceEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988887777765432   2478899999999999999999988


Q ss_pred             H-cCCccEEEeCCC--CCC---CCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------hhccccCCC
Q 044485           89 Q-YGKLDIMFNNAG--TVD---EVKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------VCGIIGGAA  147 (257)
Q Consensus        89 ~-~~~id~lv~~ag--~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------~~~~~~~~~  147 (257)
                      . ++++|+||||||  ...   ....++.+.+.++|++.+++|+.+++.+.+.+..               ..+.. ...
T Consensus        79 ~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~  157 (260)
T 2qq5_A           79 EQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ-YMF  157 (260)
T ss_dssp             HHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTS-CCS
T ss_pred             hcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcC-CCC
Confidence            6 899999999995  320   0125677888999999999999999988766532               12222 223


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc---cccccCCCCCHHHHHHHHHHh
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM---YSNLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~l  224 (257)
                      ...|++||+|++.|+++++.|++++||++|+|+||+++|++...............   ...+.++..+|+|+|+.++||
T Consensus       158 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l  237 (260)
T 2qq5_A          158 NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVAL  237 (260)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999998654322111000000   112334456899999999999


Q ss_pred             cCCCC-CcccccEEEecC
Q 044485          225 GSDES-KCVSGHNLVVDG  241 (257)
Q Consensus       225 ~s~~~-~~~~G~~~~~dg  241 (257)
                      +++.+ .+++|+++..|+
T Consensus       238 ~s~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          238 ATDPNILSLSGKVLPSCD  255 (260)
T ss_dssp             HTCTTGGGGTTCEEEHHH
T ss_pred             hcCcccccccceeechhh
Confidence            99986 489999998874

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=4.7e-39  Score=263.08  Aligned_cols=218  Identities=15%  Similarity=0.190  Sum_probs=179.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEe-e--CcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIA-D--IKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~-~--r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +|++|||||++|||++++++|+++|++|+++ +  |+.+.++++.+++  .+          +|+.|+++++++++++.+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~----------~~~~~~~~v~~~~~~~~~   68 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG----------TIALAEQKPERLVDATLQ   68 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT----------EEECCCCCGGGHHHHHGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC----------CcccCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999 6  9988887776665  11          233377888889999999


Q ss_pred             HcCCccEEEeCCCCCCCC-CCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           89 QYGKLDIMFNNAGTVDEV-KPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      .++++|+||||||..... ..++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|+
T Consensus        69 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  148 (244)
T 1zmo_A           69 HGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYG  148 (244)
T ss_dssp             GSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHH
T ss_pred             HcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHH
Confidence            999999999999976420 0467889999999999999999999877663               344555667788999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhh---HhHhhhhhccccCcc--ccccCCCCCHHHHHHHHHHhcCC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA---KDFLKLADDGLGGMY--SNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      +||+|+++|+++++.|++++||++|+|+||+++|++.   ......  +......  ..|.+++.+|+|+|+.++||+++
T Consensus       149 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~  226 (244)
T 1zmo_A          149 PARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENN--PELRERVDRDVPLGRLGRPDEMGALITFLASR  226 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHC--HHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccch--HHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999999999987   543210  1001111  23557789999999999999999


Q ss_pred             CCCcccccEEEecCce
Q 044485          228 ESKCVSGHNLVVDGGF  243 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~  243 (257)
                      .+.+++|+.+.+|||.
T Consensus       227 ~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          227 RAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             TTGGGTTCEEEESTTC
T ss_pred             cccCccCCEEEeCCCC
Confidence            9999999999999996

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=9.1e-39  Score=262.95  Aligned_cols=231  Identities=27%  Similarity=0.391  Sum_probs=190.5

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc-chhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      |+.++++|++|||||++|||++++++|+++|++|++++|+ .+.++++.+++...+   .++.++.+|++|+++++++++
T Consensus         1 m~~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~   77 (258)
T 3afn_B            1 MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG---GDAAFFAADLATSEACQQLVD   77 (258)
T ss_dssp             -CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT---CEEEEEECCTTSHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC---CceEEEECCCCCHHHHHHHHH
Confidence            4557889999999999999999999999999999999999 777777777765432   348899999999999999999


Q ss_pred             HHHHHcCCccEEEeCCCC-CCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh--------------------hhccc
Q 044485           85 TAVTQYGKLDIMFNNAGT-VDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG--------------------VCGII  143 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s--------------------~~~~~  143 (257)
                      ++.+.++++|+||||||. ...  .++.+.+.+++++.+++|+.+++.+.+.+..                    ..+..
T Consensus        78 ~~~~~~g~id~vi~~Ag~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~  155 (258)
T 3afn_B           78 EFVAKFGGIDVLINNAGGLVGR--KPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHT  155 (258)
T ss_dssp             HHHHHHSSCSEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHH
T ss_pred             HHHHHcCCCCEEEECCCCcCCc--CccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhcc
Confidence            999999999999999997 433  5678889999999999999999987654432                    22233


Q ss_pred             -cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh-hhccccCccccccCCCCCHHHHHHHH
Q 044485          144 -GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL-ADDGLGGMYSNLKGAVLEPEDAAEAA  221 (257)
Q Consensus       144 -~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~  221 (257)
                       +.+....|++||++++.+++.++.|++++||++++|+||+++|++....... .....   ...+.+++.+|+|+|+.+
T Consensus       156 ~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~dva~~~  232 (258)
T 3afn_B          156 GGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRIS---NGIPMGRFGTAEEMAPAF  232 (258)
T ss_dssp             CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHH---TTCTTCSCBCGGGTHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHh---ccCCCCcCCCHHHHHHHH
Confidence             5566778999999999999999999999999999999999999986542110 00000   123456788999999999


Q ss_pred             HHhcCCCCC-cccccEEEecCcee
Q 044485          222 LYLGSDESK-CVSGHNLVVDGGFA  244 (257)
Q Consensus       222 ~~l~s~~~~-~~~G~~~~~dgG~~  244 (257)
                      ++++++... +++|+.+++|||..
T Consensus       233 ~~l~~~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          233 LFFASHLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             HHHHCHHHHTTCCSEEEEESTTSS
T ss_pred             HHHhCcchhccccCCEEeECCCcc
Confidence            999998766 89999999999964

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=2.5e-38  Score=266.35  Aligned_cols=235  Identities=25%  Similarity=0.326  Sum_probs=191.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++....+  .++.++.+|++|+++++++++++.
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG--NKVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CceEEEEeCCCCHHHHHHHHHHHH
Confidence            368899999999999999999999999999999999999888877776643211  248899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~~y  151 (257)
                      +.++++|+||||||....  .++.+.+.+++++.+++|+.+++.+.+.+.                |..+..+.+....|
T Consensus       100 ~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  177 (302)
T 1w6u_A          100 KVAGHPNIVINNAAGNFI--SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPS  177 (302)
T ss_dssp             HHTCSCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchh
Confidence            999999999999997654  567788999999999999999999866553                22344456677899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccCh-hhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTP-LAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      ++||++++.|++.++.+++++||++++|+||+++|+ +..................+.+++.+|+|+|+.+++|+++...
T Consensus       178 ~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~  257 (302)
T 1w6u_A          178 ASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYAS  257 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCccc
Confidence            999999999999999999999999999999999997 4332111000000000134556788999999999999998888


Q ss_pred             cccccEEEecCceeee
Q 044485          231 CVSGHNLVVDGGFAIV  246 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~  246 (257)
                      +++|+.+++|||..+.
T Consensus       258 ~~~G~~~~v~gg~~~~  273 (302)
T 1w6u_A          258 WINGAVIKFDGGEEVL  273 (302)
T ss_dssp             TCCSCEEEESTTHHHH
T ss_pred             ccCCCEEEECCCeeec
Confidence            8999999999998765

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-38  Score=258.18  Aligned_cols=226  Identities=29%  Similarity=0.363  Sum_probs=183.9

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |+.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..++..       .+.++.+|++|+++++++++ 
T Consensus         1 m~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~-   72 (244)
T 1cyd_A            1 MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-------GIEPVCVDLGDWDATEKALG-   72 (244)
T ss_dssp             --CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-------TCEEEECCTTCHHHHHHHHT-
T ss_pred             CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-------CCCcEEecCCCHHHHHHHHH-
Confidence            4567889999999999999999999999999999999999887776665532       25677999999999988876 


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhccccCCCCc
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIGGAATH  149 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~~~~~~  149 (257)
                         .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+..                ..+..+.+...
T Consensus        73 ---~~~~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  147 (244)
T 1cyd_A           73 ---GIGPVDLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLI  147 (244)
T ss_dssp             ---TCCCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBH
T ss_pred             ---HcCCCCEEEECCcccCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcc
Confidence               56789999999998654  5678889999999999999999998766533                22334455667


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      .|+++|++++.|++.+++|++++||++++|+||+++|++....... +.....+. ..+.+++.+|+|+|+.+++++++.
T Consensus       148 ~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (244)
T 1cyd_A          148 TYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD-PEFARKLKERHPLRKFAEVEDVVNSILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC-HHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccC-HHHHHHHHhcCCccCCCCHHHHHHHHHHHhCch
Confidence            8999999999999999999999999999999999999986532111 00000111 234567899999999999999998


Q ss_pred             CCcccccEEEecCceee
Q 044485          229 SKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~  245 (257)
                      ..+++|+.+.+|||..+
T Consensus       227 ~~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          227 SASTSGGGILVDAGYLA  243 (244)
T ss_dssp             GTTCCSSEEEESTTGGG
T ss_pred             hhcccCCEEEECCCccC
Confidence            88999999999999753

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.2e-38  Score=265.46  Aligned_cols=231  Identities=24%  Similarity=0.347  Sum_probs=187.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...+   .++.++.+|++|+++++++++++.
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~  106 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYG---VHSKAYKCNISDPKSVEETISQQE  106 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHC---SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcceEEEeecCCHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999999877776666554322   248899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCC-CCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhcccc--CCCCc
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNIL-DNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIG--GAATH  149 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~--~~~~~  149 (257)
                      +.++++|+||||||..... .++. +.+.++|++.+++|+.+++.+.+.+.               |..+..+  .+...
T Consensus       107 ~~~g~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~  185 (279)
T 3ctm_A          107 KDFGTIDVFVANAGVTWTQ-GPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQA  185 (279)
T ss_dssp             HHHSCCSEEEECGGGSTTC---CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHH
T ss_pred             HHhCCCCEEEECCcccccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcc
Confidence            9999999999999976431 3455 78899999999999999998766653               2233334  44566


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      .|++||++++.|++.++.|++++| ++++|+||+++|++...........+  ....+.+++.+|+|+|+.+++|+++..
T Consensus       186 ~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~p~~~~~~~~dvA~~~~~l~s~~~  262 (279)
T 3ctm_A          186 PYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKW--WQLTPLGREGLTQELVGGYLYLASNAS  262 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHH--HHHSTTCSCBCGGGTHHHHHHHHSGGG
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHH--HHhCCccCCcCHHHHHHHHHHHhCccc
Confidence            899999999999999999999999 99999999999998642111000000  013355678999999999999999988


Q ss_pred             CcccccEEEecCceee
Q 044485          230 KCVSGHNLVVDGGFAI  245 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~  245 (257)
                      .+++|+++.+|||..+
T Consensus       263 ~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          263 TFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             TTCCSCEEEESTTCCC
T ss_pred             cCccCCEEEECCCeec
Confidence            8999999999999764

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=7.5e-39  Score=261.40  Aligned_cols=212  Identities=14%  Similarity=0.084  Sum_probs=179.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ...++|++|||||++|||++++++|+++|++|++++|+.+..+.             ...++.+|++|+++++++++++.
T Consensus         3 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~~D~~~~~~v~~~~~~~~   69 (241)
T 1dhr_A            3 ASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-------------ASVIVKMTDSFTEQADQVTAEVG   69 (241)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS-------------EEEECCCCSCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC-------------CcEEEEcCCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999998765321             15678899999999999999999


Q ss_pred             HHc--CCccEEEeCCCCCCCCCCCC-CCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchh
Q 044485           88 TQY--GKLDIMFNNAGTVDEVKPNI-LDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~--~~id~lv~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y  151 (257)
                      +.+  +++|+||||||....  .++ .+.+.++|++.+++|+.+++.+.+.+.             |..+..+.+....|
T Consensus        70 ~~~~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  147 (241)
T 1dhr_A           70 KLLGDQKVDAILCVAGGWAG--GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGY  147 (241)
T ss_dssp             HHHTTCCEEEEEECCCCCCC--BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHH
T ss_pred             HHhCCCCCCEEEEcccccCC--CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHH
Confidence            999  799999999998754  556 788899999999999999999877663             34455566778899


Q ss_pred             hhhHHHHHHHHHHHHHHhc--cCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELG--RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~--~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      ++||+|++.|+++++.|++  ++||++|+|+||+++|++.......  .        ...+..+|+|+|+.+++++++..
T Consensus       148 ~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~--~--------~~~~~~~~~~vA~~v~~l~~~~~  217 (241)
T 1dhr_A          148 GMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE--A--------DFSSWTPLEFLVETFHDWITGNK  217 (241)
T ss_dssp             HHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT--S--------CGGGSEEHHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc--h--------hhccCCCHHHHHHHHHHHhcCCC
Confidence            9999999999999999999  8999999999999999987653211  0        01235679999999999999999


Q ss_pred             CcccccEEEecCcee
Q 044485          230 KCVSGHNLVVDGGFA  244 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~  244 (257)
                      .+++|+.+.+|||..
T Consensus       218 ~~~~G~~~~v~g~~~  232 (241)
T 1dhr_A          218 RPNSGSLIQVVTTDG  232 (241)
T ss_dssp             CCCTTCEEEEEEETT
T ss_pred             cCccceEEEEeCCCC
Confidence            999999999999865

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.6e-38  Score=262.59  Aligned_cols=229  Identities=18%  Similarity=0.281  Sum_probs=179.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+++ |++|||||++|||++++++|+++|++|++++|+.+.++++.+++...    .++.++.+|++|+++++++++++.
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~   92 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK----TRVLPLTLDVRDRAAMSAAVDNLP   92 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT----SCEEEEECCTTCHHHHHHHHHTCC
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC----CcEEEEEcCCCCHHHHHHHHHHHH
Confidence            3566 99999999999999999999999999999999998888888777542    248899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------------hhccccCCCCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------------VCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------------~~~~~~~~~~~~y  151 (257)
                      +.++++|+||||||.... ..++.+.+.++|++.+++|+.+++.+.+.+..                ..+..+.+....|
T Consensus        93 ~~~g~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y  171 (272)
T 2nwq_A           93 EEFATLRGLINNAGLALG-TDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVY  171 (272)
T ss_dssp             GGGSSCCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhCCCCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchH
Confidence            999999999999997642 15678899999999999999999998666632                2333455667789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      +++|++++.|+++++.|++++||++|+|+||+++|++.................  .....+|+|+|+.++||+++ ..+
T Consensus       172 ~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~~~~pedvA~~v~~l~s~-~~~  248 (272)
T 2nwq_A          172 GGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYA--GAHPIQPEDIAETIFWIMNQ-PAH  248 (272)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC----------------------CCCCBCHHHHHHHHHHHHTS-CTT
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhc--cCCCCCHHHHHHHHHHHhCC-Ccc
Confidence            999999999999999999999999999999999999865321111111111110  11247999999999999996 567


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      ++|+.+.+|+|...
T Consensus       249 ~~g~~i~v~~~~~~  262 (272)
T 2nwq_A          249 LNINSLEIMPVSQS  262 (272)
T ss_dssp             EEEEEEEEEETTEE
T ss_pred             CccceEEEeeccCc
Confidence            99999999999543

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=3.7e-38  Score=258.40  Aligned_cols=221  Identities=22%  Similarity=0.303  Sum_probs=176.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |++|||||++|||++++++|+++|++|++++|+.+.++++.+++.      .++.++.+|++|+++++++++++.+.+++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   74 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG------DNLYIAQLDVRNRAAIEEMLASLPAEWCN   74 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTEEEEECCTTCHHHHHHHHHTSCTTTCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------CceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999988888777763      23889999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhHHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKHG  157 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK~a  157 (257)
                      +|+||||||+... ..++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|++||++
T Consensus        75 iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  153 (248)
T 3asu_A           75 IDILVNNAGLALG-MEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAF  153 (248)
T ss_dssp             CCEEEECCCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCcCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHH
Confidence            9999999997632 1567889999999999999999999877663               34455566777899999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEeecCCCcc-ChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccE
Q 044485          158 LLGLMKNTAVELGRFGIRVNCVSPYAVS-TPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHN  236 (257)
Q Consensus       158 ~~~~~~~l~~e~~~~gi~v~~i~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~  236 (257)
                      +++|+++++.|++++||++|+|+||+++ |++................  ......+|+|+|+.++||+++ ..+++|+.
T Consensus       154 ~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~--~~~~~~~p~dvA~~v~~l~s~-~~~~~g~~  230 (248)
T 3asu_A          154 VRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTY--QNTVALTPEDVSEAVWWVSTL-PAHVNINT  230 (248)
T ss_dssp             HHHHHHHHHHHTTTSCCEEEEEEECSBCC------------------------CCBCHHHHHHHHHHHHHS-CTTCCCCE
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHH--hccCCCCHHHHHHHHHHHhcC-CccceeeE
Confidence            9999999999999999999999999999 9986432111111111111  012346999999999999997 56799999


Q ss_pred             EEecCce
Q 044485          237 LVVDGGF  243 (257)
Q Consensus       237 ~~~dgG~  243 (257)
                      +.++++.
T Consensus       231 i~v~~~~  237 (248)
T 3asu_A          231 LEMMPVT  237 (248)
T ss_dssp             EEECCTT
T ss_pred             EEEcccc
Confidence            9999874

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.4e-38  Score=261.75  Aligned_cols=220  Identities=16%  Similarity=0.183  Sum_probs=179.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+ +...+   .++..+     |+++++++++++.+.+++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~---~~~~~~-----d~~~v~~~~~~~~~~~g~   72 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETY---PQLKPM-----SEQEPAELIEAVTSAYGQ   72 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHC---TTSEEC-----CCCSHHHHHHHHHHHHSC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcC---CcEEEE-----CHHHHHHHHHHHHHHhCC
Confidence            789999999999999999999999999999999887766654 43322   123333     777888999999999999


Q ss_pred             ccEEEeCCCCC-CCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhHH
Q 044485           93 LDIMFNNAGTV-DEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        93 id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK~  156 (257)
                      +|+||||||.. ..  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|++||+
T Consensus        73 iD~lv~nAg~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  150 (254)
T 1zmt_A           73 VDVLVSNDIFAPEF--QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARA  150 (254)
T ss_dssp             CCEEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHH
T ss_pred             CCEEEECCCcCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHH
Confidence            99999999986 33  568889999999999999999999877663               3344455667789999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCc---------cChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCC
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAV---------STPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      +++.|+++++.|++++||++|+|+||++         +|++...........   ....+.+++.+|+|+|+.++||+++
T Consensus       151 a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~---~~~~p~~~~~~p~dvA~~v~~l~s~  227 (254)
T 1zmt_A          151 GACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHV---KKVTALQRLGTQKELGELVAFLASG  227 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHH---HHHSSSSSCBCHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHH---hccCCCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999         887754311100000   0134567789999999999999999


Q ss_pred             CCCcccccEEEecCceeee
Q 044485          228 ESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~~  246 (257)
                      .+.+++|+.+.+|||..+.
T Consensus       228 ~~~~~tG~~~~vdgG~~~~  246 (254)
T 1zmt_A          228 SCDYLTGQVFWLAGGFPMI  246 (254)
T ss_dssp             SCGGGTTCEEEESTTCCCC
T ss_pred             ccCCccCCEEEECCCchhh
Confidence            9999999999999998754

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=9e-38  Score=255.19  Aligned_cols=226  Identities=27%  Similarity=0.440  Sum_probs=188.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEe-eCcchhhHhHHHHhccCCCCCCCcee-EecCCCCHHHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSSSSSASGCSY-VHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~-~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +|++|||||++|||++++++|+++|++|+++ +|+.+.+++..+++...+   .++.. +.+|++|+++++++++++.+.
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRG---SPLVAVLGANLLEAEAATALVHQAAEV   77 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTT---CSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CceEEEEeccCCCHHHHHHHHHHHHHh
Confidence            3799999999999999999999999999998 898888777777665432   23566 999999999999999999999


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhh
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSS  154 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~s  154 (257)
                      ++++|+||||||....  .++.+.+.+++++.+++|+.+++.+.+.+.               |..+..+.+....|+++
T Consensus        78 ~~~~d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  155 (245)
T 2ph3_A           78 LGGLDTLVNNAGITRD--TLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVAS  155 (245)
T ss_dssp             HTCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHH
Confidence            9999999999998754  567888999999999999999998876653               33345566777899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      |++++.+++.++.|+.++||++++|+||+++|++............  ....+.+++.+|+|+|+.+++++++...+++|
T Consensus       156 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  233 (245)
T 2ph3_A          156 KAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAY--LKQIPAGRFGRPEEVAEAVAFLVSEKAGYITG  233 (245)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHH--HHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHH--HhcCCCCCCcCHHHHHHHHHHHhCcccccccC
Confidence            9999999999999999999999999999999998754211100000  01234567889999999999999988888999


Q ss_pred             cEEEecCcee
Q 044485          235 HNLVVDGGFA  244 (257)
Q Consensus       235 ~~~~~dgG~~  244 (257)
                      +.+.+|||..
T Consensus       234 ~~~~v~gg~~  243 (245)
T 2ph3_A          234 QTLCVDGGLT  243 (245)
T ss_dssp             CEEEESTTCS
T ss_pred             CEEEECCCCC
Confidence            9999999963

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-37  Score=257.98  Aligned_cols=231  Identities=26%  Similarity=0.386  Sum_probs=191.5

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-cchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++...+   .++.++.+|++|+++++++++++
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~   93 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG---AQGVAIQADISKPSEVVALFDKA   93 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999 6667777777665432   34889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhcc-ccCCCCchhh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCGI-IGGAATHAYT  152 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~-~~~~~~~~y~  152 (257)
                      .+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+..             ..+. .+.+....|+
T Consensus        94 ~~~~~~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~  171 (274)
T 1ja9_A           94 VSHFGGLDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYA  171 (274)
T ss_dssp             HHHHSCEEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHH
T ss_pred             HHHcCCCCEEEECCCCCCC--cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCCCCchHH
Confidence            9999999999999998754  5677889999999999999999998766532             2333 4556677899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh----------hccccCc-cccccCCCCCHHHHHHHH
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA----------DDGLGGM-YSNLKGAVLEPEDAAEAA  221 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~----------~~~~~~~-~~~~~~~~~~~~~~a~~~  221 (257)
                      ++|++++.|++.++.|++++||++++|+||+++|++........          ....... ...+.+++.+|+|+|+++
T Consensus       172 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  251 (274)
T 1ja9_A          172 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAV  251 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence            99999999999999999999999999999999999876321110          0000000 134556788999999999


Q ss_pred             HHhcCCCCCcccccEEEecCce
Q 044485          222 LYLGSDESKCVSGHNLVVDGGF  243 (257)
Q Consensus       222 ~~l~s~~~~~~~G~~~~~dgG~  243 (257)
                      ++|+++...+++|+.+++|||.
T Consensus       252 ~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          252 SALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHhCcccccccCcEEEecCCc
Confidence            9999988888999999999995

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=8e-38  Score=285.10  Aligned_cols=218  Identities=26%  Similarity=0.453  Sum_probs=183.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc---------hhhHhHHHHhccCCCCCCCceeEecCCCCHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD---------DLGESVCKDIGSSSSSASGCSYVHCDVTKEKD   78 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~---------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~   78 (257)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.         +.++++.+++...++   +   ..+|++|.++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~---~---~~~d~~d~~~   77 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG---V---AVADYNNVLD   77 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTC---E---EEEECCCTTC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCC---e---EEEEcCCHHH
Confidence            468899999999999999999999999999999998765         566777777755432   1   2368888888


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccc
Q 044485           79 IENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGII  143 (257)
Q Consensus        79 v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~  143 (257)
                      ++++++++.+.+|+||+||||||+...  .++.+.+.++|++++++|+.+++++.+.+.               |..+..
T Consensus        78 ~~~~v~~~~~~~G~iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~  155 (604)
T 2et6_A           78 GDKIVETAVKNFGTVHVIINNAGILRD--ASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY  155 (604)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC
Confidence            999999999999999999999998754  678999999999999999999999977763               455666


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHH
Q 044485          144 GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       144 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  223 (257)
                      +.+....|++||+|+.+|+|+|+.|++++|||||+|+|| +.|+|......  +.         ..+..+|+++|..++|
T Consensus       156 ~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~--~~---------~~~~~~pe~vA~~v~~  223 (604)
T 2et6_A          156 GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMP--PP---------MLEKLGPEKVAPLVLY  223 (604)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSC--HH---------HHTTCSHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCC--hh---------hhccCCHHHHHHHHHH
Confidence            778888999999999999999999999999999999998 68988643211  00         0124589999999999


Q ss_pred             hcCCCCCcccccEEEecCceeee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      |+++. .+++|+.+.+|||....
T Consensus       224 L~s~~-~~itG~~~~vdgG~~~~  245 (604)
T 2et6_A          224 LSSAE-NELTGQFFEVAAGFYAQ  245 (604)
T ss_dssp             HTSSS-CCCCSCEEEEETTEEEE
T ss_pred             HhCCc-ccCCCCEEEECCCeEEE
Confidence            99998 89999999999997654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.1e-37  Score=260.83  Aligned_cols=219  Identities=24%  Similarity=0.404  Sum_probs=181.2

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ||.++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|.+++++++++
T Consensus        25 ~m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~  101 (301)
T 3tjr_A           25 FLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG---FDAHGVVCDVRHLDEMVRLADE  101 (301)
T ss_dssp             CCCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHH
T ss_pred             HHhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHH
Confidence            3556899999999999999999999999999999999999999988888876543   3488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCc
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATH  149 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~  149 (257)
                      +.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.+.+.+.                |..+..+.+...
T Consensus       102 ~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  179 (301)
T 3tjr_A          102 AFRLLGGVDVVFSNAGIVVA--GPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLG  179 (301)
T ss_dssp             HHHHHSSCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBH
T ss_pred             HHHhCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCch
Confidence            99999999999999998755  678899999999999999999999877652                445566677788


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcccc-------Ccc-ccccCCCCCHHHHHHHH
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG-------GMY-SNLKGAVLEPEDAAEAA  221 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~a~~~  221 (257)
                      .|++||+|++.|+++++.|++++||++++|+||+++|++.............       .+. ......+++|+|+|+.+
T Consensus       180 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i  259 (301)
T 3tjr_A          180 TYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLT  259 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999999998754332111100       000 01123467999999999


Q ss_pred             HHhcCCCC
Q 044485          222 LYLGSDES  229 (257)
Q Consensus       222 ~~l~s~~~  229 (257)
                      +.++....
T Consensus       260 ~~~l~~~~  267 (301)
T 3tjr_A          260 ADAILANR  267 (301)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHhcCC
Confidence            99886543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.9e-38  Score=255.29  Aligned_cols=210  Identities=13%  Similarity=0.150  Sum_probs=178.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ++|++|||||++|||++++++|+++|++|++++|+.+..+.             .+.++.+|++|+++++++++++.+.+
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-------------SNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-------------EEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc-------------ccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            57999999999999999999999999999999998765321             15678899999999999999999999


Q ss_pred             --CCccEEEeCCCCCCCCCCCC-CCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchhhhh
Q 044485           91 --GKLDIMFNNAGTVDEVKPNI-LDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYTSS  154 (257)
Q Consensus        91 --~~id~lv~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y~~s  154 (257)
                        +++|+||||||....  .++ .+.+.++|++.+++|+.+++.+.+.+.             |..+..+.+....|++|
T Consensus        69 ~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  146 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGWAG--GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMA  146 (236)
T ss_dssp             TTCCEEEEEECCCCCCC--BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred             CCCCCCEEEECCcccCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHH
Confidence              799999999998654  456 778899999999999999999877763             34455566778899999


Q ss_pred             HHHHHHHHHHHHHHhc--cCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHH-HhcCCCCCc
Q 044485          155 KHGLLGLMKNTAVELG--RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL-YLGSDESKC  231 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~--~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~l~s~~~~~  231 (257)
                      |++++.|+++++.|++  ++||++|+|+||+++|++.......          ....+..+|+|+|+.++ +|+++...+
T Consensus       147 K~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~dvA~~i~~~l~s~~~~~  216 (236)
T 1ooe_A          147 KAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLSFISEHLLKWTTETSSRP  216 (236)
T ss_dssp             HHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------CCGGGCBCHHHHHHHHHHHHHCGGGCC
T ss_pred             HHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC----------ccccccCCHHHHHHHHHHHHcCCCccc
Confidence            9999999999999998  9999999999999999987653211          01124578999999998 555888899


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      ++|+.+.+|||...
T Consensus       217 ~~G~~~~v~gg~~~  230 (236)
T 1ooe_A          217 SSGALLKITTENGT  230 (236)
T ss_dssp             CTTCEEEEEEETTE
T ss_pred             ccccEEEEecCCCc
Confidence            99999999999654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=8.2e-38  Score=256.77  Aligned_cols=214  Identities=15%  Similarity=0.206  Sum_probs=182.5

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+..+|++|||||++|||+++|++|+++|++|++++|+.+..+               -..+.+|++|+++++++++++.
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~d~~d~~~v~~~~~~~~   82 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA---------------DHSFTIKDSGEEEIKSVIEKIN   82 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------------SEEEECSCSSHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------ccceEEEeCCHHHHHHHHHHHH
Confidence            3556899999999999999999999999999999999876432               1346789999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchhhhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYTSS  154 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y~~s  154 (257)
                      +.++++|+||||||..... ..+.+.+.+++++.+++|+.+++.+.+.+.             |..+..+.+....|++|
T Consensus        83 ~~~g~iD~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (251)
T 3orf_A           83 SKSIKVDTFVCAAGGWSGG-NASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGAT  161 (251)
T ss_dssp             TTTCCEEEEEECCCCCCCB-CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred             HHcCCCCEEEECCccCCCC-CcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHH
Confidence            9999999999999987542 347788899999999999999999977763             45566677788899999


Q ss_pred             HHHHHHHHHHHHHHhc--cCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCC-CCCc
Q 044485          155 KHGLLGLMKNTAVELG--RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD-ESKC  231 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~--~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~-~~~~  231 (257)
                      |+|++.|++.++.|++  ++||++++|+||+++|++.+....          ..+.+++.+|+|+|+.+++|+++ .+.+
T Consensus       162 Kaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~~~dva~~i~~l~~~~~~~~  231 (251)
T 3orf_A          162 KAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMS----------DANFDDWTPLSEVAEKLFEWSTNSDSRP  231 (251)
T ss_dssp             HHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCT----------TSCGGGSBCHHHHHHHHHHHHHCGGGCC
T ss_pred             HHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcc----------cccccccCCHHHHHHHHHHHhcCccccC
Confidence            9999999999999987  899999999999999998765432          12345678999999999999999 8889


Q ss_pred             ccccEEEecCceeeee
Q 044485          232 VSGHNLVVDGGFAIVN  247 (257)
Q Consensus       232 ~~G~~~~~dgG~~~~~  247 (257)
                      ++|+.+.+++|.....
T Consensus       232 ~tG~~i~v~~g~~~~~  247 (251)
T 3orf_A          232 TNGSLVKFETKSKVTT  247 (251)
T ss_dssp             CTTCEEEEEEETTEEE
T ss_pred             CcceEEEEecCCccce
Confidence            9999999999876654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=5.6e-38  Score=254.48  Aligned_cols=211  Identities=18%  Similarity=0.207  Sum_probs=168.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |++|||||++|||++++++|+++|++|++++|+.+.++++.+++.      .++.++.+|++|+++++++++++.+   .
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~---~   72 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLS------NNVGYRARDLASHQEVEQLFEQLDS---I   72 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCS------SCCCEEECCTTCHHHHHHHHHSCSS---C
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh------hccCeEeecCCCHHHHHHHHHHHhh---c
Confidence            789999999999999999999999999999999988888777662      2478999999999999999887654   3


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhhhhHHHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYTSSKHGL  158 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~~sK~a~  158 (257)
                      +|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.              |..+..+.+....|++||+|+
T Consensus        73 ~d~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~  150 (230)
T 3guy_A           73 PSTVVHSAGSGYF--GLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAV  150 (230)
T ss_dssp             CSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCcCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHH
Confidence            4999999998754  678899999999999999999999877663              344555667788999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcC-CCCCcccccEE
Q 044485          159 LGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS-DESKCVSGHNL  237 (257)
Q Consensus       159 ~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s-~~~~~~~G~~~  237 (257)
                      +.|++.++.|++++||++|+|+||+++|++.+....          ..+.+++.+|+|+|+.++++++ +...+++|+.+
T Consensus       151 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~  220 (230)
T 3guy_A          151 KGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGK----------SLDTSSFMSAEDAALMIHGALANIGNGYVSDITV  220 (230)
T ss_dssp             HHHHHHHHHHTTTSSCEEEEEEECCC--------------------------CCCHHHHHHHHHHHCCEETTEEEEEEEE
T ss_pred             HHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCC----------CCCcccCCCHHHHHHHHHHHHhCcCCCCccceee
Confidence            999999999999999999999999999998765422          1234678899999999999987 56789999999


Q ss_pred             EecCcee
Q 044485          238 VVDGGFA  244 (257)
Q Consensus       238 ~~dgG~~  244 (257)
                      ..+....
T Consensus       221 ~~~~~~~  227 (230)
T 3guy_A          221 NREGHHH  227 (230)
T ss_dssp             EC-----
T ss_pred             cCCCCCC
Confidence            8887543

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=2.3e-38  Score=265.53  Aligned_cols=220  Identities=22%  Similarity=0.250  Sum_probs=172.8

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.      .++.++.+|++|+++++++++++
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~d~~~v~~~~~~~   84 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA------GQVEVRELDLQDLSSVRRFADGV   84 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSS------SEEEEEECCTTCHHHHHHHHHTC
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------CCeeEEEcCCCCHHHHHHHHHhc
Confidence            457899999999999999999999999999999999999988877766652      24889999999999999988876


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhcccc-----------
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGIIG-----------  144 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~~~-----------  144 (257)
                          +++|+||||||+..+    ..+.+.++|++.+++|+.+++.+.+.+.           |..+..+           
T Consensus        85 ----~~iD~lv~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~  156 (291)
T 3rd5_A           85 ----SGADVLINNAGIMAV----PYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRS  156 (291)
T ss_dssp             ----CCEEEEEECCCCCSC----CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSS
T ss_pred             ----CCCCEEEECCcCCCC----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccc
Confidence                689999999998642    3566788899999999999999988773           2233322           


Q ss_pred             --CCCCchhhhhHHHHHHHHHHHHHHhccCC--cEEEeecCCCccChhhHhHhhhhhccccCccccccCCCC-CHHHHHH
Q 044485          145 --GAATHAYTSSKHGLLGLMKNTAVELGRFG--IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAE  219 (257)
Q Consensus       145 --~~~~~~y~~sK~a~~~~~~~l~~e~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~  219 (257)
                        .++...|++||+|++.|++.++.|++++|  |++|+|+||+++|++.+......   .......+.++.. +|+|+|+
T Consensus       157 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~A~  233 (291)
T 3rd5_A          157 RRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKL---GDALMSAATRVVATDADFGAR  233 (291)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------CHHHHHHHH
T ss_pred             cCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHH---HHHHHHHHHHHHhCCHHHHHH
Confidence              22345799999999999999999999888  99999999999999977542211   1112233344444 4999999


Q ss_pred             HHHHhcCCCCCcccccEEEecCceee
Q 044485          220 AALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       220 ~~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      .++||+++  .+++|+++.+|||..-
T Consensus       234 ~~~~l~~~--~~~~G~~~~vdgG~~~  257 (291)
T 3rd5_A          234 QTLYAASQ--DLPGDSFVGPRFGYLG  257 (291)
T ss_dssp             HHHHHHHS--CCCTTCEEEETTSSSS
T ss_pred             HHHHHHcC--CCCCCceeCCcccccC
Confidence            99999998  3799999999999763

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.8e-37  Score=282.84  Aligned_cols=217  Identities=31%  Similarity=0.533  Sum_probs=178.9

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++.+|++|||||++|||+++|++|+++|++|++++|+.  ++++.+++...+   .++..+.+|++  .+.+++++++.
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g---~~~~~~~~Dv~--~~~~~~~~~~~  390 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAG---GEAWPDQHDVA--KDSEAIIKNVI  390 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTT---CEEEEECCCHH--HHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcC---CeEEEEEcChH--HHHHHHHHHHH
Confidence            468899999999999999999999999999999998742  355556665433   23667778883  55678899999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.+|++|+||||||+...  .++.+.+.++|++++++|+.+++++.+.+.               |..+..+.++...|+
T Consensus       391 ~~~G~iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~  468 (604)
T 2et6_A          391 DKYGTIDILVNNAGILRD--RSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYS  468 (604)
T ss_dssp             HHHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHH
T ss_pred             HhcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHH
Confidence            999999999999998754  678999999999999999999999977773               445666777888999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      +||+|+.+|+|+|+.|++++|||||+|+||. +|+|.......  .         .....+|+|+|+.++||+++.+. +
T Consensus       469 asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~--~---------~~~~~~pe~vA~~v~~L~s~~~~-i  535 (604)
T 2et6_A          469 SSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE--Q---------DKNLYHADQVAPLLVYLGTDDVP-V  535 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--------------------CCSSCGGGTHHHHHHTTSTTCC-C
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch--h---------hccCCCHHHHHHHHHHHhCCccC-C
Confidence            9999999999999999999999999999995 99886542210  0         12346899999999999999888 9


Q ss_pred             cccEEEecCceeee
Q 044485          233 SGHNLVVDGGFAIV  246 (257)
Q Consensus       233 ~G~~~~~dgG~~~~  246 (257)
                      +|+.+.+|||....
T Consensus       536 tG~~~~vdGG~~~~  549 (604)
T 2et6_A          536 TGETFEIGGGWIGN  549 (604)
T ss_dssp             CSCEEEEETTEEEE
T ss_pred             CCcEEEECCCeeEe
Confidence            99999999998764

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=6.3e-37  Score=250.21  Aligned_cols=218  Identities=22%  Similarity=0.311  Sum_probs=189.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC-------eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGA-------KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~-------~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      +|++|||||++|||++++++|+++|+       +|++++|+.+.++++.+++...+   .++.++.+|++|+++++++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~   78 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG---ALTDTITADISDMADVRRLTT   78 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT---CEEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC---CeeeEEEecCCCHHHHHHHHH
Confidence            68999999999999999999999999       99999999888888777775432   348899999999999999999


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCc
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATH  149 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~  149 (257)
                      ++.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+...
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  156 (244)
T 2bd0_A           79 HIVERYGHIDCLVNNAGVGRF--GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSS  156 (244)
T ss_dssp             HHHHHTSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCH
T ss_pred             HHHHhCCCCCEEEEcCCcCCc--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCc
Confidence            999999999999999998754  667888999999999999999999877663               334455667778


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      .|++||++++.|++.++.|++++||++++|+||+++|++......   .   .     ..++.+|+|+|+.+++++++..
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~---~-----~~~~~~~~dva~~~~~l~~~~~  225 (244)
T 2bd0_A          157 IYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD---E---M-----QALMMMPEDIAAPVVQAYLQPS  225 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS---T---T-----GGGSBCHHHHHHHHHHHHTSCT
T ss_pred             hhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc---c---c-----cccCCCHHHHHHHHHHHHhCCc
Confidence            999999999999999999999999999999999999998653211   0   0     1257899999999999999999


Q ss_pred             CcccccEEEecCceee
Q 044485          230 KCVSGHNLVVDGGFAI  245 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~  245 (257)
                      .+++|+.+..|+|..+
T Consensus       226 ~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          226 RTVVEEIILRPTSGDI  241 (244)
T ss_dssp             TEEEEEEEEEETTCCC
T ss_pred             cccchheEEecccccc
Confidence            9999999999998765

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-37  Score=253.00  Aligned_cols=217  Identities=24%  Similarity=0.357  Sum_probs=174.7

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ...+++|++|||||++|||++++++|+++|++|++++|+.+.+    +++   .    .+.++ +|+  .++++++++++
T Consensus        14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~---~----~~~~~-~D~--~~~~~~~~~~~   79 (249)
T 1o5i_A           14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRS---G----HRYVV-CDL--RKDLDLLFEKV   79 (249)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHT---C----SEEEE-CCT--TTCHHHHHHHS
T ss_pred             HhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----Hhh---C----CeEEE-eeH--HHHHHHHHHHh
Confidence            4578999999999999999999999999999999999987332    222   1    26667 999  55677666654


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                          .++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|
T Consensus        80 ----~~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  153 (249)
T 1o5i_A           80 ----KEVDILVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTS  153 (249)
T ss_dssp             ----CCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHH
T ss_pred             ----cCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchH
Confidence                379999999997654  568889999999999999999998876652               34455566777899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc-cccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD-GLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +++|++++.|+++++.|++++||++|+|+||+++|++.......... ..  ....+.+++.+|+|+|+.++||+++.+.
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~p~~~~~~~~dvA~~i~~l~s~~~~  231 (249)
T 1o5i_A          154 NSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQV--ESQIPMRRMAKPEEIASVVAFLCSEKAS  231 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHH--HTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHH--HhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            99999999999999999999999999999999999987543211100 00  0134557788999999999999999889


Q ss_pred             cccccEEEecCceee
Q 044485          231 CVSGHNLVVDGGFAI  245 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~  245 (257)
                      +++|+++.+|||...
T Consensus       232 ~~tG~~~~vdgG~~~  246 (249)
T 1o5i_A          232 YLTGQTIVVDGGLSK  246 (249)
T ss_dssp             TCCSCEEEESTTCCC
T ss_pred             CCCCCEEEECCCccc
Confidence            999999999999754

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=9.7e-37  Score=252.51  Aligned_cols=229  Identities=27%  Similarity=0.447  Sum_probs=180.6

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++..... ..++.++.+|++|+++++++++++.+.
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE-PQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC-GGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcC-CCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999998887777777654321 124788999999999999999999999


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh------------------hhccccCCCCchh
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG------------------VCGIIGGAATHAY  151 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s------------------~~~~~~~~~~~~y  151 (257)
                      ++++|+||||||...          .++|++.+++|+.+++.+.+.+..                  ..+..+.+....|
T Consensus        84 ~g~id~lv~~Ag~~~----------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  153 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN----------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVY  153 (267)
T ss_dssp             HSCCCEEEECCCCCC----------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHH
T ss_pred             cCCCCEEEECCCCCC----------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchH
Confidence            999999999999642          245889999999999987665532                  2233344566789


Q ss_pred             hhhHHHHHHHHHHH--HHHhccCCcEEEeecCCCccChhhHhHhhhhh-cccc---Ccc--ccccCCCCCHHHHHHHHHH
Q 044485          152 TSSKHGLLGLMKNT--AVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD-DGLG---GMY--SNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       152 ~~sK~a~~~~~~~l--~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-~~~~---~~~--~~~~~~~~~~~~~a~~~~~  223 (257)
                      ++||++++.|++++  +.|++++||++|+|+||+++|++......... ....   ...  ..+..++++|+|+|+.+++
T Consensus       154 ~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~  233 (267)
T 2gdz_A          154 CASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLIT  233 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHH
Confidence            99999999999995  68999999999999999999998654321100 0000   000  1112346799999999999


Q ss_pred             hcCCCCCcccccEEEecCceeeeeccee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAIVNAGFS  251 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~~~~~~~  251 (257)
                      |+++.  +++|+++.+|||..++-..++
T Consensus       234 l~s~~--~~~G~~~~v~gg~~~~~~~~~  259 (267)
T 2gdz_A          234 LIEDD--ALNGAIMKITTSKGIHFQDYG  259 (267)
T ss_dssp             HHHCT--TCSSCEEEEETTTEEEECCCC
T ss_pred             HhcCc--CCCCcEEEecCCCcccccCcC
Confidence            99875  389999999999877655544

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=1.3e-37  Score=266.24  Aligned_cols=234  Identities=13%  Similarity=0.037  Sum_probs=186.5

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHH-cCCeEEEeeCcchhhH------------hHHHHhccCCCCCCCceeEecCCCCH
Q 044485           10 LQGKVALITGGARGIGECTARLFSK-HGAKVLIADIKDDLGE------------SVCKDIGSSSSSASGCSYVHCDVTKE   76 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~-~g~~Vi~~~r~~~~~~------------~~~~~~~~~~~~~~~v~~~~~D~~~~   76 (257)
                      -.+|++|||||++|||+++|+.|++ +|++|++++|+.+..+            .+.+++...+   .++..+.+|++|+
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G---~~a~~i~~Dvtd~  121 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKG---LYAKSINGDAFSD  121 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTT---CCEEEEESCTTSH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcC---CceEEEECCCCCH
Confidence            5689999999999999999999999 9999999998765432            1233443332   3478899999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCCCCCC-----------CCCCC---------------------CCCCHHHHHHHHhh
Q 044485           77 KDIENAVNTAVTQYGKLDIMFNNAGTVDE-----------VKPNI---------------------LDNDQAEFERILSI  124 (257)
Q Consensus        77 ~~v~~~~~~~~~~~~~id~lv~~ag~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~  124 (257)
                      ++++++++++.+.+|++|+||||||....           ...++                     .+.+.++|++.+++
T Consensus       122 ~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~V  201 (405)
T 3zu3_A          122 EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAV  201 (405)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHh
Confidence            99999999999999999999999997410           11344                     77899999999999


Q ss_pred             hchhhh-HHHHHH---------------HhhhccccCCCC--chhhhhHHHHHHHHHHHHHHhccC-CcEEEeecCCCcc
Q 044485          125 NLVGAF-LGRNML---------------LGVCGIIGGAAT--HAYTSSKHGLLGLMKNTAVELGRF-GIRVNCVSPYAVS  185 (257)
Q Consensus       125 n~~~~~-~l~~~~---------------~s~~~~~~~~~~--~~y~~sK~a~~~~~~~l~~e~~~~-gi~v~~i~pg~v~  185 (257)
                      |..+.+ .+.+.+               +|..+..+.+..  ..|++||+|+++|+|+|+.|++++ |||||+|+||++.
T Consensus       202 n~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~  281 (405)
T 3zu3_A          202 MGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVV  281 (405)
T ss_dssp             HSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCC
T ss_pred             hchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCc
Confidence            999887 444333               244455566666  899999999999999999999999 9999999999999


Q ss_pred             ChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeeeccee
Q 044485          186 TPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFS  251 (257)
Q Consensus       186 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~~~~~  251 (257)
                      |++....... +... .....+.++.+.|+++++.+.||+++   ++.|+...+|++..+.-.+|.
T Consensus       282 T~~s~~ip~~-p~y~-~~l~~~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r~d~~e  342 (405)
T 3zu3_A          282 SQASSAIPMM-PLYL-SLLFKVMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLRADYKE  342 (405)
T ss_dssp             CHHHHTSTTH-HHHH-HHHHHHHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEECCHHH
T ss_pred             CchhhcCCCC-cHHH-HHHHHHHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCCCchhh
Confidence            9987654321 1111 11133567889999999999999988   478999999999988766553

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=2.2e-36  Score=252.17  Aligned_cols=223  Identities=22%  Similarity=0.264  Sum_probs=179.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..++..      .++.++.+|++|+++++++++++.+
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYP------DRAEAISLDVTDGERIDVVAADVLA   75 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCT------TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc------CCceEEEeeCCCHHHHHHHHHHHHH
Confidence            3567999999999999999999999999999999999988887776552      2388999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~~  153 (257)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+               +|..+..+.++...|++
T Consensus        76 ~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (281)
T 3m1a_A           76 RYGRVDVLVNNAGRTQV--GAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSA  153 (281)
T ss_dssp             HHSCCSEEEECCCCEEE--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             hCCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHH
Confidence            99999999999998754  67889999999999999999999987766               34556667778889999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcccc-----------CccccccCCCCCHHHHHHHHH
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG-----------GMYSNLKGAVLEPEDAAEAAL  222 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~a~~~~  222 (257)
                      ||++++.|+++++.|++++||++++|+||+++|++.............           .....+.+++.+|+|+|++++
T Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~  233 (281)
T 3m1a_A          154 TKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIR  233 (281)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999985432111000000           001234456889999999999


Q ss_pred             HhcCCCCCcccccEEEecCc
Q 044485          223 YLGSDESKCVSGHNLVVDGG  242 (257)
Q Consensus       223 ~l~s~~~~~~~G~~~~~dgG  242 (257)
                      +++++..   .|..+++.++
T Consensus       234 ~~~~~~~---~~~~~~l~s~  250 (281)
T 3m1a_A          234 LALDTEK---TPLRLALGGD  250 (281)
T ss_dssp             HHHHSSS---CCSEEEESHH
T ss_pred             HHHhCCC---CCeEEecCch
Confidence            9997753   4556666544

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=1.3e-36  Score=257.71  Aligned_cols=217  Identities=25%  Similarity=0.411  Sum_probs=181.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEee---------CcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIAD---------IKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDI   79 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~---------r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v   79 (257)
                      ++++|++|||||++|||++++++|+++|++|++++         |+.+.+++..+++...++      ...+|+++.+++
T Consensus         6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~------~~~~D~~~~~~~   79 (319)
T 1gz6_A            6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG------KAVANYDSVEAG   79 (319)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC------EEEEECCCGGGH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC------eEEEeCCCHHHH
Confidence            68899999999999999999999999999999964         466677777777754331      235899999999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhcccc
Q 044485           80 ENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIG  144 (257)
Q Consensus        80 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~  144 (257)
                      +++++++.+.++++|+||||||+...  .++.+.+.++|+..+++|+.+++++.+.+.               |..+..+
T Consensus        80 ~~~~~~~~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~  157 (319)
T 1gz6_A           80 EKLVKTALDTFGRIDVVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYG  157 (319)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC
Confidence            99999999999999999999998754  567888999999999999999999877763               3345556


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHh
Q 044485          145 GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       145 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  224 (257)
                      .+....|++||+|++.|++.+++|++++||++|+|+||++ |++......  .         ...+..+|+|+|+.++||
T Consensus       158 ~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~--~---------~~~~~~~p~dvA~~~~~l  225 (319)
T 1gz6_A          158 NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMP--E---------DLVEALKPEYVAPLVLWL  225 (319)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSC--H---------HHHHHSCGGGTHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCC--h---------hhhccCCHHHHHHHHHHH
Confidence            6778899999999999999999999999999999999998 776543211  0         011246899999999999


Q ss_pred             cCCCCCcccccEEEecCceeee
Q 044485          225 GSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       225 ~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +++ ..+++|+++.+|||....
T Consensus       226 ~s~-~~~~tG~~~~v~GG~~~~  246 (319)
T 1gz6_A          226 CHE-SCEENGGLFEVGAGWIGK  246 (319)
T ss_dssp             TST-TCCCCSCEEEEETTEEEE
T ss_pred             hCc-hhhcCCCEEEECCCeEEE
Confidence            987 457899999999998754

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=1.8e-37  Score=267.67  Aligned_cols=235  Identities=15%  Similarity=0.055  Sum_probs=183.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHH-cCCeEEEeeCcchhhHh------------HHHHhccCCCCCCCceeEecCCCCHH
Q 044485           11 QGKVALITGGARGIGECTARLFSK-HGAKVLIADIKDDLGES------------VCKDIGSSSSSASGCSYVHCDVTKEK   77 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~-~g~~Vi~~~r~~~~~~~------------~~~~~~~~~~~~~~v~~~~~D~~~~~   77 (257)
                      .+|++|||||++|||+++|+.|++ +|++|++++|+.+.+++            +.+++...+   .++..+.+|++|++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G---~~a~~i~~Dvtd~~  136 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAG---LYSKSINGDAFSDA  136 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTT---CCEEEEESCTTSHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcC---CcEEEEEecCCCHH
Confidence            589999999999999999999999 99999999998765432            234444333   34788999999999


Q ss_pred             HHHHHHHHHHHHc-CCccEEEeCCCCCC-----------CCCCCC---------------------CCCCHHHHHHHHhh
Q 044485           78 DIENAVNTAVTQY-GKLDIMFNNAGTVD-----------EVKPNI---------------------LDNDQAEFERILSI  124 (257)
Q Consensus        78 ~v~~~~~~~~~~~-~~id~lv~~ag~~~-----------~~~~~~---------------------~~~~~~~~~~~~~~  124 (257)
                      +++++++++.+.+ |+||+||||||...           ....++                     .+.+.++|++.+++
T Consensus       137 ~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~V  216 (422)
T 3s8m_A          137 ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITV  216 (422)
T ss_dssp             HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHh
Confidence            9999999999999 99999999999730           011233                     36899999999999


Q ss_pred             hchhhh-HHHHHH---------------HhhhccccCCCC--chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccC
Q 044485          125 NLVGAF-LGRNML---------------LGVCGIIGGAAT--HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVST  186 (257)
Q Consensus       125 n~~~~~-~l~~~~---------------~s~~~~~~~~~~--~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t  186 (257)
                      |..+.+ .+.+.+               +|..+..+.+..  ..|++||+|+.+|+|+|+.|++++|||||+|+||+++|
T Consensus       217 n~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T  296 (422)
T 3s8m_A          217 MGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVT  296 (422)
T ss_dssp             HSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred             hchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcC
Confidence            998876 544433               233344444444  78999999999999999999999999999999999999


Q ss_pred             hhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccc-ccEEEecCceeeeeccee
Q 044485          187 PLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS-GHNLVVDGGFAIVNAGFS  251 (257)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~-G~~~~~dgG~~~~~~~~~  251 (257)
                      ++......... .. .....+.++.+.|+++++.+.||+|+.- |.+ |+...+|++..+.-.+|+
T Consensus       297 ~~~~~ip~~~~-~~-~~~~~~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~r~d~~e  359 (422)
T 3s8m_A          297 QASAAIPVMPL-YI-SMVYKIMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRLRLDDWE  359 (422)
T ss_dssp             TTGGGSTHHHH-HH-HHHHHHHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCEESCTTT
T ss_pred             hhhhcCCCChH-HH-HHHHhhhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCCccchhh
Confidence            98765432211 11 1112356789999999999999999854 454 776669999988766654

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.5e-36  Score=249.06  Aligned_cols=229  Identities=24%  Similarity=0.328  Sum_probs=182.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.. .++.++.+|++|+++++++++++.
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~  106 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP-GTLIPYRCDLSNEEDILSMFSAIR  106 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCC-ceEEEEEecCCCHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999998888877777544321 247889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh-----------------cc--ccCCCC
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC-----------------GI--IGGAAT  148 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~-----------------~~--~~~~~~  148 (257)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.++..+                 +.  .+.+..
T Consensus       107 ~~~g~iD~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (279)
T 1xg5_A          107 SQHSGVDICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVT  184 (279)
T ss_dssp             HHHCCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGG
T ss_pred             HhCCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCC
Confidence            999999999999998654  678888999999999999999998866553221                 22  233445


Q ss_pred             chhhhhHHHHHHHHHHHHHHhc--cCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELG--RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~--~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ..|+++|++++.|++.++.|++  ++||++++|+||+++|++............  ....+..++.+|+|+|+.++++++
T Consensus       185 ~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~dvA~~i~~l~~  262 (279)
T 1xg5_A          185 HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKA--AATYEQMKCLKPEDVAEAVIYVLS  262 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHH--HHHHC---CBCHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHH--hhhcccccCCCHHHHHHHHHHHhc
Confidence            6799999999999999999998  889999999999999998543221111100  001223457899999999999999


Q ss_pred             CCCCcccccEEEecC
Q 044485          227 DESKCVSGHNLVVDG  241 (257)
Q Consensus       227 ~~~~~~~G~~~~~dg  241 (257)
                      +...+.+|+....++
T Consensus       263 ~~~~~~~g~i~i~~~  277 (279)
T 1xg5_A          263 TPAHIQIGDIQMRPT  277 (279)
T ss_dssp             SCTTEEEEEEEEEET
T ss_pred             CCcceEeeeEEEccC
Confidence            887777776544443

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=8.2e-36  Score=242.16  Aligned_cols=211  Identities=29%  Similarity=0.365  Sum_probs=170.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.       ++.++.+|++|+++++++++++.+.+
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-------GALPLPGDVREEGDWARAVAAMEEAF   76 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-------TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-------hceEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999888777766653       37889999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhhH
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~sK  155 (257)
                      +++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+.+....|+++|
T Consensus        77 ~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  154 (234)
T 2ehd_A           77 GELSALVNNAGVGVM--KPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASK  154 (234)
T ss_dssp             SCCCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHH
Confidence            999999999998654  567888999999999999999998766653               333444556677999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccccc
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGH  235 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~  235 (257)
                      ++++.+++.++.|++++||++++|+||+++|++.....   ..     .     ...+|+|+|+.+++++++...+++|+
T Consensus       155 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~-----~-----~~~~~~dvA~~~~~l~~~~~~~~~g~  221 (234)
T 2ehd_A          155 FGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP---GQ-----A-----WKLKPEDVAQAVLFALEMPGHAMVSE  221 (234)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------------CCHHHHHHHHHHHHHSCCSSCCCE
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc---cc-----c-----CCCCHHHHHHHHHHHhCCCcccccce
Confidence            99999999999999999999999999999999865321   00     0     14699999999999999988899999


Q ss_pred             EEEecCce
Q 044485          236 NLVVDGGF  243 (257)
Q Consensus       236 ~~~~dgG~  243 (257)
                      .+..++..
T Consensus       222 ~~~~~~~~  229 (234)
T 2ehd_A          222 IELRPTRP  229 (234)
T ss_dssp             EECCC---
T ss_pred             EEEeecCC
Confidence            77665543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=6.3e-36  Score=253.68  Aligned_cols=219  Identities=22%  Similarity=0.335  Sum_probs=172.3

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      |.++.+|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+. ..++.++.+|++|+++++++++++
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~   81 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGS-GPEVMGVQLDVASREGFKMAADEV   81 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEEECCCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999998888887754321 124889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------------hhhccccC
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------------GVCGIIGG  145 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------------s~~~~~~~  145 (257)
                      .+.++++|+||||||+...  .++.+.+.+++++.+++|+.+++++.+.+.                     |..+..+.
T Consensus        82 ~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~  159 (319)
T 3ioy_A           82 EARFGPVSILCNNAGVNLF--QPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA  159 (319)
T ss_dssp             HHHTCCEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC
T ss_pred             HHhCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC
Confidence            9999999999999998754  678899999999999999999998755543                     34455566


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcccc----------CccccccCCCCCHH
Q 044485          146 AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG----------GMYSNLKGAVLEPE  215 (257)
Q Consensus       146 ~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~  215 (257)
                      +....|++||+|+++|+++++.|+.++||++++|+||+|+|++.............          ...........+|+
T Consensus       160 ~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe  239 (319)
T 3ioy_A          160 GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPD  239 (319)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHH
Confidence            77789999999999999999999999999999999999999987643221111000          00001111236999


Q ss_pred             HHHHHHHHhcCCC
Q 044485          216 DAAEAALYLGSDE  228 (257)
Q Consensus       216 ~~a~~~~~l~s~~  228 (257)
                      ++|+.++..+...
T Consensus       240 ~vA~~~~~al~~~  252 (319)
T 3ioy_A          240 VIGARVIEAMKAN  252 (319)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHcC
Confidence            9999999988664

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=2.6e-36  Score=276.01  Aligned_cols=221  Identities=26%  Similarity=0.430  Sum_probs=171.5

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC---------cchhhHhHHHHhccCCCCCCCceeEecCCCCHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI---------KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEK   77 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r---------~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   77 (257)
                      ..+++||++|||||++|||+++|++|+++|++|++++|         +.+.++++.+++...+.      .+.+|++|.+
T Consensus        14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~D~~d~~   87 (613)
T 3oml_A           14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG------EAVADYNSVI   87 (613)
T ss_dssp             -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC------CEEECCCCGG
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC------eEEEEeCCHH
Confidence            34789999999999999999999999999999999988         66677777777765432      2348999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------Hhhhcc
Q 044485           78 DIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGI  142 (257)
Q Consensus        78 ~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~  142 (257)
                      +++++++++.+.++++|+||||||+...  .++.+.+.++|++++++|+.+++++.+.+               +|..+.
T Consensus        88 ~~~~~~~~~~~~~g~iDiLVnnAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~  165 (613)
T 3oml_A           88 DGAKVIETAIKAFGRVDILVNNAGILRD--RSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGI  165 (613)
T ss_dssp             GHHHHHC----------CEECCCCCCCC--CCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHCCCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHc
Confidence            9999999999999999999999998765  67889999999999999999999998776               345566


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHH
Q 044485          143 IGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL  222 (257)
Q Consensus       143 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  222 (257)
                      .+.+....|++||+|+++|+++|+.|++++||+||+|+||.+ |++......           ....+..+|+|+|+.++
T Consensus       166 ~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~-----------~~~~~~~~pedvA~~v~  233 (613)
T 3oml_A          166 YGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILP-----------DILFNELKPKLIAPVVA  233 (613)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCC-----------HHHHTTCCGGGTHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccc-----------hhhhhcCCHHHHHHHHH
Confidence            777888899999999999999999999999999999999975 544432211           11123568999999999


Q ss_pred             HhcCCCCCcccccEEEecCceeeeec
Q 044485          223 YLGSDESKCVSGHNLVVDGGFAIVNA  248 (257)
Q Consensus       223 ~l~s~~~~~~~G~~~~~dgG~~~~~~  248 (257)
                      ||+++. .+++|+++.+|||+.....
T Consensus       234 ~L~s~~-~~~tG~~i~vdGG~~~~~~  258 (613)
T 3oml_A          234 YLCHES-CEDNGSYIESAAGWATKLH  258 (613)
T ss_dssp             HTTSTT-CCCCSCEEEEETTEEEEEC
T ss_pred             HhcCCC-cCCCceEEEECCCeEEEEE
Confidence            999998 8899999999999987643

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=1.3e-35  Score=243.99  Aligned_cols=225  Identities=19%  Similarity=0.224  Sum_probs=172.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcch--hhHhHHHHhccCCCCCCCceeEecCCCCH-HHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDD--LGESVCKDIGSSSSSASGCSYVHCDVTKE-KDIENAVN   84 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~   84 (257)
                      ++++|++|||||++|||++++++|+++|++ |++++|+.+  .++++.+...     +.++.++.+|++|+ ++++++++
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~   76 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINP-----KVNITFHTYDVTVPVAESKKLLK   76 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCT-----TSEEEEEECCTTSCHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCC-----CceEEEEEEecCCChHHHHHHHH
Confidence            578999999999999999999999999997 999999863  2333332221     23488999999998 99999999


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh------------------hhccccCC
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG------------------VCGIIGGA  146 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s------------------~~~~~~~~  146 (257)
                      ++.+.++++|+||||||..          +.+++++.+++|+.+++.+.+.+..                  ..+..+.+
T Consensus        77 ~~~~~~g~id~lv~~Ag~~----------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  146 (254)
T 1sby_A           77 KIFDQLKTVDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH  146 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT
T ss_pred             HHHHhcCCCCEEEECCccC----------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC
Confidence            9999999999999999974          2356899999999999998776642                  23334456


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh--hccccCccccccCCCCCHHHHHHHHHHh
Q 044485          147 ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA--DDGLGGMYSNLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       147 ~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~l  224 (257)
                      ....|++||++++.|+++++.++.++||++++|+||+++|++.+......  .........  .....+|+|+|+.++++
T Consensus       147 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dvA~~i~~~  224 (254)
T 1sby_A          147 QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL--SHPTQTSEQCGQNFVKA  224 (254)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT--TSCCEEHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh--cCCCCCHHHHHHHHHHH
Confidence            67789999999999999999999888999999999999999875421110  000000000  01234899999999999


Q ss_pred             cCCCCCcccccEEEecCceeeeecceeecc
Q 044485          225 GSDESKCVSGHNLVVDGGFAIVNAGFSVFG  254 (257)
Q Consensus       225 ~s~~~~~~~G~~~~~dgG~~~~~~~~~~~~  254 (257)
                      ++   .+.+|+.+.+|||... ...|..+.
T Consensus       225 ~~---~~~~G~~~~v~gG~~~-~~~~~~~~  250 (254)
T 1sby_A          225 IE---ANKNGAIWKLDLGTLE-AIEWTKHW  250 (254)
T ss_dssp             HH---HCCTTCEEEEETTEEE-ECCCCCSC
T ss_pred             HH---cCCCCCEEEEeCCcee-Eecccccc
Confidence            86   3579999999999743 33444443

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.7e-35  Score=238.93  Aligned_cols=209  Identities=20%  Similarity=0.185  Sum_probs=170.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcC--CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHG--AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++|++|||||++|||++++++|+++|  ++|++++|+.+.++++.+.      ...++.++.+|++|+++++++++++.+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI------KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC------CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc------cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999  9999999998877655332      123489999999999999999999999


Q ss_pred             HcC--CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh--------------------------h
Q 044485           89 QYG--KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV--------------------------C  140 (257)
Q Consensus        89 ~~~--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~--------------------------~  140 (257)
                      .++  ++|+||||||...+ ..++.+.+.+++++.+++|+.+++.+.+.+...                          .
T Consensus        76 ~~g~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  154 (250)
T 1yo6_A           76 IVGSDGLSLLINNAGVLLS-YGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL  154 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCC-BCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGG
T ss_pred             hcCCCCCcEEEECCcccCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCc
Confidence            998  89999999998752 267788899999999999999999886655432                          1


Q ss_pred             ccccC-------CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCC
Q 044485          141 GIIGG-------AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE  213 (257)
Q Consensus       141 ~~~~~-------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (257)
                      +..+.       ++...|++||++++.|++.++.|++++||++++|+||+++|++...                 ..+.+
T Consensus       155 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~  217 (250)
T 1yo6_A          155 GSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------------NAALT  217 (250)
T ss_dssp             GCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------
T ss_pred             cccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------------CCCCC
Confidence            22222       4567899999999999999999999999999999999999998642                 13578


Q ss_pred             HHHHHHHHHHhcCCCCCcccccEEEecCce
Q 044485          214 PEDAAEAALYLGSDESKCVSGHNLVVDGGF  243 (257)
Q Consensus       214 ~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~  243 (257)
                      |+++|+.+++++++...+++|+.+.+|||.
T Consensus       218 ~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          218 VEQSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             -HHHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             HHHHHHHHHHHHhcccccCCCeEEEECCcC
Confidence            999999999999988888999999999985

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-35  Score=240.89  Aligned_cols=213  Identities=30%  Similarity=0.435  Sum_probs=173.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||++|||++++++|+++|++|++++|+.+ .              .++.++.+|++|+++++++++++ +.++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~--------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~   65 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G--------------EDLIYVEGDVTREEDVRRAVARA-QEEA   65 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S--------------SSSEEEECCTTCHHHHHHHHHHH-HHHS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c--------------cceEEEeCCCCCHHHHHHHHHHH-HhhC
Confidence            589999999999999999999999999999999864 1              12578999999999999999999 8889


Q ss_pred             CccEEEeCCCCCCCCCCCCCCC----CHHHHHHHHhhhchhhhHHHHHHHhh---------------------hccccCC
Q 044485           92 KLDIMFNNAGTVDEVKPNILDN----DQAEFERILSINLVGAFLGRNMLLGV---------------------CGIIGGA  146 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~s~---------------------~~~~~~~  146 (257)
                      ++|++|||||....  .++.+.    +.+++++.+++|+.+++.+.+.+...                     .+..+.+
T Consensus        66 ~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  143 (242)
T 1uay_A           66 PLFAVVSAAGVGLA--EKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI  143 (242)
T ss_dssp             CEEEEEECCCCCCC--CCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT
T ss_pred             CceEEEEcccccCc--ccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC
Confidence            99999999998654  334443    45599999999999999987765432                     2233455


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcccccc-CCCCCHHHHHHHHHHhc
Q 044485          147 ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLG  225 (257)
Q Consensus       147 ~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~  225 (257)
                      ....|+++|++++.+++.++.|++++||++++|+||+++|++.............  ...+. +++.+|+|+|+.+++++
T Consensus       144 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~l~  221 (242)
T 1uay_A          144 GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLA--AQVPFPPRLGRPEEYAALVLHIL  221 (242)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHH--TTCCSSCSCCCHHHHHHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHH--hhCCCcccCCCHHHHHHHHHHHh
Confidence            6678999999999999999999999999999999999999987643221110000  12344 67889999999999999


Q ss_pred             CCCCCcccccEEEecCceeee
Q 044485          226 SDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       226 s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ++  .+++|+.+.+|||..+.
T Consensus       222 ~~--~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          222 EN--PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HC--TTCCSCEEEESTTCCCC
T ss_pred             cC--CCCCCcEEEEcCCeecC
Confidence            87  67999999999998764

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=8.9e-36  Score=243.71  Aligned_cols=210  Identities=22%  Similarity=0.281  Sum_probs=146.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|++|||||++|||+++|++|++ |+.|++++|+.+.+++..+ .       .++.++.+|+++.++ .+.+.+..+
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~-------~~~~~~~~D~~~~~~-~~~~~~~~~   71 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-I-------EGVEPIESDIVKEVL-EEGGVDKLK   71 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-S-------TTEEEEECCHHHHHH-TSSSCGGGT
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-h-------cCCcceecccchHHH-HHHHHHHHH
Confidence            56789999999999999999999988 9999999999887766654 2       137889999998877 444555556


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYTSS  154 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~~s  154 (257)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.              |..+..+.+....|++|
T Consensus        72 ~~~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  149 (245)
T 3e9n_A           72 NLDHVDTLVHAAAVARD--TTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAAS  149 (245)
T ss_dssp             TCSCCSEEEECC------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------CHHHHHH
T ss_pred             hcCCCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCCchHHHHH
Confidence            77899999999998765  678888999999999999999999877663              34455566778899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      |+|++.|+++++.|++++||++++|+||+++|++.+........      ..+..++.+|+|+|+.+++|++...   +|
T Consensus       150 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~------~~~~~~~~~p~dvA~~i~~l~~~~~---~~  220 (245)
T 3e9n_A          150 KHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGT------NFRPEIYIEPKEIANAIRFVIDAGE---TT  220 (245)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------CCGGGSCHHHHHHHHHHHHTSCT---TE
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhhc------ccccccCCCHHHHHHHHHHHHcCCC---cc
Confidence            99999999999999999999999999999999987665432211      1223457899999999999998764   34


Q ss_pred             cEEEe
Q 044485          235 HNLVV  239 (257)
Q Consensus       235 ~~~~~  239 (257)
                      +.+++
T Consensus       221 ~~~~i  225 (245)
T 3e9n_A          221 QITNV  225 (245)
T ss_dssp             EEEEE
T ss_pred             ceeee
Confidence            44443

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=5e-35  Score=254.16  Aligned_cols=234  Identities=13%  Similarity=0.012  Sum_probs=182.4

Q ss_pred             cCCcEEEEecCCCchHHH--HHHHHHHcCCeEEEeeCcchhh------------HhHHHHhccCCCCCCCceeEecCCCC
Q 044485           10 LQGKVALITGGARGIGEC--TARLFSKHGAKVLIADIKDDLG------------ESVCKDIGSSSSSASGCSYVHCDVTK   75 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~--ia~~l~~~g~~Vi~~~r~~~~~------------~~~~~~~~~~~~~~~~v~~~~~D~~~   75 (257)
                      ..+|++|||||++|||++  +++.|+++|++|++++|+.+..            +.+.+.+...+   .++..+.+|++|
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~Dvtd  134 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKG---LVAKNFIEDAFS  134 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTT---CCEEEEESCTTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcC---CcEEEEEeeCCC
Confidence            678999999999999999  9999999999999999976432            33333333332   348899999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCCCCCC-----------CCCCC---------------------CCCCHHHHHHHHh
Q 044485           76 EKDIENAVNTAVTQYGKLDIMFNNAGTVDE-----------VKPNI---------------------LDNDQAEFERILS  123 (257)
Q Consensus        76 ~~~v~~~~~~~~~~~~~id~lv~~ag~~~~-----------~~~~~---------------------~~~~~~~~~~~~~  123 (257)
                      +++++++++++.+.+|+||+||||||....           ...++                     .+.+.++|++.++
T Consensus       135 ~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~  214 (418)
T 4eue_A          135 NETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRK  214 (418)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHH
Confidence            999999999999999999999999997410           01223                     4579999999999


Q ss_pred             hhchhhh-HHHHHH---------------HhhhccccCCCC--chhhhhHHHHHHHHHHHHHHhcc-CCcEEEeecCCCc
Q 044485          124 INLVGAF-LGRNML---------------LGVCGIIGGAAT--HAYTSSKHGLLGLMKNTAVELGR-FGIRVNCVSPYAV  184 (257)
Q Consensus       124 ~n~~~~~-~l~~~~---------------~s~~~~~~~~~~--~~y~~sK~a~~~~~~~l~~e~~~-~gi~v~~i~pg~v  184 (257)
                      +|..+.+ .+.+.+               +|..+..+.+..  ..|++||+|+++|+|+|+.|+++ +|||||+|+||++
T Consensus       215 vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v  294 (418)
T 4eue_A          215 VMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKAL  294 (418)
T ss_dssp             HHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred             HhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcC
Confidence            9998877 443333               244455666766  89999999999999999999999 9999999999999


Q ss_pred             cChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeeecce
Q 044485          185 STPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGF  250 (257)
Q Consensus       185 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~~~~  250 (257)
                      +|++........ .... ....+.++.+.|+++++.+.+|+++  ...+|+.+.+|||..+.-.++
T Consensus       295 ~T~~s~~ip~~p-~y~~-~~~~~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r~d~~  356 (418)
T 4eue_A          295 VTKASAYIPTFP-LYAA-ILYKVMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLRMDDL  356 (418)
T ss_dssp             CCHHHHTSTTHH-HHHH-HHHHHHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEESCTT
T ss_pred             cChhhhcCCCCc-HHHH-HHHHHHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceeeCChh
Confidence            999876542211 1111 1122345678999999999999987  446899999999887764443

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=4.3e-34  Score=241.03  Aligned_cols=210  Identities=24%  Similarity=0.313  Sum_probs=169.5

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCH-HHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKE-KDIENAVNT   85 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~   85 (257)
                      +..+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+  .++.++.+|++|+ +++++++++
T Consensus         7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~~v~~~~~~   84 (311)
T 3o26_A            7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH--ENVVFHQLDVTDPIATMSSLADF   84 (311)
T ss_dssp             -----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--CSEEEEECCTTSCHHHHHHHHHH
T ss_pred             CccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEEccCCCcHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999998888888876543  3488999999998 999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCC----------------------------CCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH
Q 044485           86 AVTQYGKLDIMFNNAGTVDE----------------------------VKPNILDNDQAEFERILSINLVGAFLGRNMLL  137 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~----------------------------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  137 (257)
                      +.+.++++|+||||||+...                            ....+.+.+.+++++.+++|+.+++.+.+.+.
T Consensus        85 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  164 (311)
T 3o26_A           85 IKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLI  164 (311)
T ss_dssp             HHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhh
Confidence            99999999999999998632                            01245677899999999999999999988773


Q ss_pred             h---------------hhccccC-------------------------------------------CCCchhhhhHHHHH
Q 044485          138 G---------------VCGIIGG-------------------------------------------AATHAYTSSKHGLL  159 (257)
Q Consensus       138 s---------------~~~~~~~-------------------------------------------~~~~~y~~sK~a~~  159 (257)
                      +               ..+..+.                                           +....|++||+|++
T Consensus       165 ~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~  244 (311)
T 3o26_A          165 PLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLN  244 (311)
T ss_dssp             HHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHH
T ss_pred             HhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHH
Confidence            2               2222221                                           23467999999999


Q ss_pred             HHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEE
Q 044485          160 GLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNL  237 (257)
Q Consensus       160 ~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~  237 (257)
                      +|++.++.|+.+  |+||+|+||+|+|++.+..                 ...+|++.++.+++++.......+|..+
T Consensus       245 ~~~~~la~e~~~--i~v~~v~PG~v~T~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~g~~~  303 (311)
T 3o26_A          245 AYTRVLANKIPK--FQVNCVCPGLVKTEMNYGI-----------------GNYTAEEGAEHVVRIALFPDDGPSGFFY  303 (311)
T ss_dssp             HHHHHHHHHCTT--SEEEEECCCSBCSGGGTTC-----------------CSBCHHHHHHHHHHHHTCCSSCCCSCEE
T ss_pred             HHHHHHHhhcCC--ceEEEecCCceecCCcCCC-----------------CCCCHHHHHHHHHHHHhCCCCCCCceEe
Confidence            999999999964  9999999999999986532                 1348999999999988765444455443

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=4.8e-34  Score=236.08  Aligned_cols=215  Identities=21%  Similarity=0.201  Sum_probs=178.2

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcC---CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHG---AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g---~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      ..++++|++|||||++|||++++++|+++|   ++|++++|+.+..+++. ++....   .++.++.+|++|++++++++
T Consensus        16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~-~l~~~~---~~~~~~~~Dl~~~~~v~~~~   91 (267)
T 1sny_A           16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNH---SNIHILEIDLRNFDAYDKLV   91 (267)
T ss_dssp             ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHHC---TTEEEEECCTTCGGGHHHHH
T ss_pred             ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHH-HhhccC---CceEEEEecCCChHHHHHHH
Confidence            346889999999999999999999999999   99999999987665443 222211   24889999999999999999


Q ss_pred             HHHHHHcC--CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh----------------------
Q 044485           84 NTAVTQYG--KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV----------------------  139 (257)
Q Consensus        84 ~~~~~~~~--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~----------------------  139 (257)
                      +++.+.++  ++|+||||||.... ..++.+.+.+++++.+++|+.+++.+.+.+...                      
T Consensus        92 ~~~~~~~g~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  170 (267)
T 1sny_A           92 ADIEGVTKDQGLNVLFNNAGIAPK-SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIIN  170 (267)
T ss_dssp             HHHHHHHGGGCCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEE
T ss_pred             HHHHHhcCCCCccEEEECCCcCCC-ccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEE
Confidence            99999988  89999999998752 256788899999999999999999987666332                      


Q ss_pred             ----hccccC---CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCC
Q 044485          140 ----CGIIGG---AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL  212 (257)
Q Consensus       140 ----~~~~~~---~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (257)
                          .+..+.   +....|+++|++++.|++.++.|++++||++++|+||+++|++...                 ....
T Consensus       171 isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~  233 (267)
T 1sny_A          171 MSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------SAPL  233 (267)
T ss_dssp             ECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------TCSB
T ss_pred             EecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------CCCC
Confidence                122222   2456899999999999999999999999999999999999998632                 1356


Q ss_pred             CHHHHHHHHHHhcCCCCCcccccEEEecCce
Q 044485          213 EPEDAAEAALYLGSDESKCVSGHNLVVDGGF  243 (257)
Q Consensus       213 ~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~  243 (257)
                      +|+++|+.+++++++....++|+.+.+||+.
T Consensus       234 ~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          234 DVPTSTGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             CHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             CHHHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence            8999999999999988888999999999975

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-34  Score=244.26  Aligned_cols=176  Identities=20%  Similarity=0.281  Sum_probs=144.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc-----chhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK-----DDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      ++++|++|||||++|||+++|++|+++|++|++++|+     .+.++++.+.+...+   .++.++.+|++|++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~---~~~~~~~~Dvtd~~~v~~~~   78 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDND---VDLRTLELDVQSQVSVDRAI   78 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHT---CCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcC---CcEEEEEeecCCHHHHHHHH
Confidence            4568999999999999999999999999999988776     344455555443322   34889999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhcccc-CCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIG-GAA  147 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~-~~~  147 (257)
                      +++.+.+|++|+||||||+...  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+..+ .+.
T Consensus        79 ~~~~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~  156 (324)
T 3u9l_A           79 DQIIGEDGRIDVLIHNAGHMVF--GPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPY  156 (324)
T ss_dssp             HHHHHHHSCCSEEEECCCCCBC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSS
T ss_pred             HHHHHHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCc
Confidence            9999999999999999998754  678899999999999999999999977763               3333322 345


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhh
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA  189 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~  189 (257)
                      ...|++||+|+++|+++++.|++++||++++|+||+++|++.
T Consensus       157 ~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          157 LAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence            678999999999999999999999999999999999997764

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=1.8e-35  Score=243.30  Aligned_cols=206  Identities=24%  Similarity=0.338  Sum_probs=154.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++               . +.+|++|+++++++++++   +++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------------~-~~~Dl~~~~~v~~~~~~~---~~~   62 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------------D-LSTAEGRKQAIADVLAKC---SKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------C-TTSHHHHHHHHHHHHTTC---TTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------------c-cccCCCCHHHHHHHHHHh---CCC
Confidence            689999999999999999999999999999998765421               1 468999999999888743   378


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhcc---------------
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGI---------------  142 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~---------------  142 (257)
                      +|+||||||.....         +.+++.+++|+.+++.+.+.+.               |..+.               
T Consensus        63 id~lv~~Ag~~~~~---------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  133 (257)
T 1fjh_A           63 MDGLVLCAGLGPQT---------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEA  133 (257)
T ss_dssp             CSEEEECCCCCTTC---------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred             CCEEEECCCCCCCc---------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcc
Confidence            99999999975411         1289999999999999877663               22222               


Q ss_pred             -------------ccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh-hhccccCcccccc
Q 044485          143 -------------IGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL-ADDGLGGMYSNLK  208 (257)
Q Consensus       143 -------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~  208 (257)
                                   .+.+....|++||++++.|++.++.|++++||++|+|+||+++|++.+..... ...........+.
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  213 (257)
T 1fjh_A          134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM  213 (257)
T ss_dssp             TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCST
T ss_pred             cchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhccccc
Confidence                         12234568999999999999999999999999999999999999987653111 0000000003355


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          209 GAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       209 ~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+.
T Consensus       214 ~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~~  251 (257)
T 1fjh_A          214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV  251 (257)
T ss_dssp             TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence            67899999999999999998889999999999997643

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=1e-33  Score=234.67  Aligned_cols=209  Identities=23%  Similarity=0.292  Sum_probs=173.2

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHH-cCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSK-HGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~-~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .++|++|||||++|||++++++|++ +|++|++++|+.+..++..+++...+   .++.++.+|++|.++++++++++.+
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~   78 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG---LSPRFHQLDIDDLQSIRALRDFLRK   78 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT---CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC---CeeEEEECCCCCHHHHHHHHHHHHH
Confidence            3579999999999999999999999 99999999999888888777775442   3488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCC-HHHHHHHHhhhchhhhHHHHHHHhh-------------hcccc----------
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDND-QAEFERILSINLVGAFLGRNMLLGV-------------CGIIG----------  144 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~s~-------------~~~~~----------  144 (257)
                      .++++|+||||||....  . ....+ .+++++.+++|+.+++.+.+.+...             .+..+          
T Consensus        79 ~~g~id~li~~Ag~~~~--~-~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~  155 (276)
T 1wma_A           79 EYGGLDVLVNNAGIAFK--V-ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQ  155 (276)
T ss_dssp             HHSSEEEEEECCCCCCC--T-TCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHH
T ss_pred             hcCCCCEEEECCccccc--C-CCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHh
Confidence            99999999999997643  2 23334 5899999999999999987776322             22211          


Q ss_pred             -------------------------------CCCCchhhhhHHHHHHHHHHHHHHhcc----CCcEEEeecCCCccChhh
Q 044485          145 -------------------------------GAATHAYTSSKHGLLGLMKNTAVELGR----FGIRVNCVSPYAVSTPLA  189 (257)
Q Consensus       145 -------------------------------~~~~~~y~~sK~a~~~~~~~l~~e~~~----~gi~v~~i~pg~v~t~~~  189 (257)
                                                     ..+...|++||++++.|++.++.++++    +||++++|+||+++|++.
T Consensus       156 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~  235 (276)
T 1wma_A          156 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA  235 (276)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred             hccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcC
Confidence                                           012378999999999999999999988    799999999999999985


Q ss_pred             HhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC--CCcccccEEEecCc
Q 044485          190 KDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE--SKCVSGHNLVVDGG  242 (257)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~--~~~~~G~~~~~dgG  242 (257)
                      ..                 .++.+|+|+|+.+++|++..  ..+++|+.+. +++
T Consensus       236 ~~-----------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          236 GP-----------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             CT-----------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             Cc-----------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence            42                 13679999999999999854  3689999887 544

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-34  Score=238.79  Aligned_cols=205  Identities=26%  Similarity=0.395  Sum_probs=172.5

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++.+|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+   .++.++.+|++|+++++++++++.
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG---AKVHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC---CeEEEEEeeCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999988888777775443   248899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh---------------hccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV---------------CGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~---------------~~~~~~~~~~~y~  152 (257)
                      +.++++|+||||||....  .++.+.+.+++++.+++|+.+++.+.+.+...               .+..+.+....|+
T Consensus       104 ~~~g~iD~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  181 (272)
T 1yb1_A          104 AEIGDVSILVNNAGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYC  181 (272)
T ss_dssp             HHTCCCSEEEECCCCCCC--CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHH
T ss_pred             HHCCCCcEEEECCCcCCC--cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHH
Confidence            999999999999998754  56778889999999999999999987776432               2222333445799


Q ss_pred             hhHHHHHHHHHHHHHHhc---cCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          153 SSKHGLLGLMKNTAVELG---RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~---~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      ++|++++.|++.++.|+.   ++||++++|+||+++|++.+..            ..+.+++.+|+|+|+.+++++.+..
T Consensus       182 ~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~------------~~~~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          182 SSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP------------STSLGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT------------HHHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc------------cccccCCCCHHHHHHHHHHHHHcCC
Confidence            999999999999999997   6799999999999999985321            1123467899999999999997654

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=2e-34  Score=245.23  Aligned_cols=223  Identities=20%  Similarity=0.228  Sum_probs=167.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccC---CCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSS---SSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~---~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+|++|||||++|||++++++|+++|++|++++|+...+++..+.+...   .....++.++.+|++|+++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            3689999999999999999999999999998888766554443333211   1112348899999999999999999883


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                        ++++|+||||||....  .++.+.+.++|++++++|+.+++.+.+.++               |..+..+.+....|+
T Consensus        81 --~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~  156 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLL--GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYC  156 (327)
T ss_dssp             --TSCCSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHH
T ss_pred             --cCCCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHH
Confidence              5889999999998654  567888999999999999999999877652               344555667778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc-----------ccCcc---ccccCCC-CCHHHH
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG-----------LGGMY---SNLKGAV-LEPEDA  217 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~-----------~~~~~---~~~~~~~-~~~~~~  217 (257)
                      +||++++.|++.++.|++++||+|++|+||+++|++...........           .....   ..+.+++ .+|+|+
T Consensus       157 aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv  236 (327)
T 1jtv_A          157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEV  236 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHH
Confidence            99999999999999999999999999999999999865432110000           00000   0112233 589999


Q ss_pred             HHHHHHhcCC---CCCcccccEE
Q 044485          218 AEAALYLGSD---ESKCVSGHNL  237 (257)
Q Consensus       218 a~~~~~l~s~---~~~~~~G~~~  237 (257)
                      |+.++++++.   ..++++|+.+
T Consensus       237 A~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          237 AEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHHcCCCCCeEEEeCchH
Confidence            9999999875   3457787654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=9.4e-33  Score=230.76  Aligned_cols=206  Identities=20%  Similarity=0.248  Sum_probs=170.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++.+|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.  .++.++.+|++|+++++++++++.
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~  101 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--ASAHYIAGTMEDMTFAEQFVAQAG  101 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC--SEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC--CceEEEeCCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999888887776654321  237899999999999999999999


Q ss_pred             HHcCCccEEEeC-CCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNN-AGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~-ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~  152 (257)
                      +.++++|+|||| +|...   ..+.+.+.+++.+.+++|+.+++.+.+.+.              |..+..+.+....|+
T Consensus       102 ~~~g~iD~li~naag~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  178 (286)
T 1xu9_A          102 KLMGGLDMLILNHITNTS---LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYS  178 (286)
T ss_dssp             HHHTSCSEEEECCCCCCC---CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHH
T ss_pred             HHcCCCCEEEECCccCCC---CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCccHHH
Confidence            999999999999 56542   345567899999999999999999876653              344555667788999


Q ss_pred             hhHHHHHHHHHHHHHHh--ccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          153 SSKHGLLGLMKNTAVEL--GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~--~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      +||++++.|+++++.|+  ...||++++|+||+++|++.......          .......+|+++|+.++..+...
T Consensus       179 asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          179 ASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG----------IVHMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG----------GGGGGCBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc----------cccCCCCCHHHHHHHHHHHHhcC
Confidence            99999999999999999  67899999999999999987543210          01123578999999999887654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.5e-33  Score=265.52  Aligned_cols=229  Identities=19%  Similarity=0.160  Sum_probs=182.5

Q ss_pred             ccccCCcEEEEecCCCc-hHHHHHHHHHHcCCeEEEe-eCcchhhHhHHHHhccC-CCCCCCceeEecCCCCHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARG-IGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGSS-SSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         7 ~~~~~~k~~lItGas~g-iG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      .+++.+|++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++... ...+.++.++.+|++|++++++++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV  550 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  550 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence            34688999999999998 9999999999999999998 67777777777776332 222345889999999999999999


Q ss_pred             HHHHHH-----cC-CccEEEeCCCCCCCCCC-CCCCCC--HHHHHHHHhhhchhhhHHHHHH--Hh--------------
Q 044485           84 NTAVTQ-----YG-KLDIMFNNAGTVDEVKP-NILDND--QAEFERILSINLVGAFLGRNML--LG--------------  138 (257)
Q Consensus        84 ~~~~~~-----~~-~id~lv~~ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~s--------------  138 (257)
                      +++.+.     +| ++|+||||||+...  . ++.+.+  .++|++++++|+.+++.+.+.+  ..              
T Consensus       551 e~I~e~~~~~GfG~~IDILVNNAGI~~~--g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnIS  628 (1688)
T 2pff_A          551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQ--GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS  628 (1688)
T ss_dssp             HHHHSCTTSSSCCCCCCEEECCCCCCCC--SBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCC--CCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEE
Confidence            999988     77 89999999998654  4 678888  9999999999999999887665  21              


Q ss_pred             -hhccccCCCCchhhhhHHHHHHH-HHHHHHHhccCCcEEEeecCCCcc-ChhhHhHhhhhhccccCcc-ccccCCCCCH
Q 044485          139 -VCGIIGGAATHAYTSSKHGLLGL-MKNTAVELGRFGIRVNCVSPYAVS-TPLAKDFLKLADDGLGGMY-SNLKGAVLEP  214 (257)
Q Consensus       139 -~~~~~~~~~~~~y~~sK~a~~~~-~~~l~~e~~~~gi~v~~i~pg~v~-t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  214 (257)
                       ..+..+  ....|++||+|+++| ++.++.+++++ |+||+|+||+++ |++....     ....... ..+. +..+|
T Consensus       629 SiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~-----e~~~~~l~~ipl-R~~sP  699 (1688)
T 2pff_A          629 PNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN-----NIIAEGIEKMGV-RTFSQ  699 (1688)
T ss_dssp             SCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTT-----TTCSTTTSSSSC-CCCCC
T ss_pred             ChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCc-----hHHHHHHHhCCC-CCCCH
Confidence             122222  456899999999999 78888889887 999999999999 7875431     0111111 1222 56699


Q ss_pred             HHHHHHHHHhcCCC-CCcccccEEEec--Cceeee
Q 044485          215 EDAAEAALYLGSDE-SKCVSGHNLVVD--GGFAIV  246 (257)
Q Consensus       215 ~~~a~~~~~l~s~~-~~~~~G~~~~~d--gG~~~~  246 (257)
                      +|+|+.++||+++. ..+++|+.+.+|  ||....
T Consensus       700 EEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~  734 (1688)
T 2pff_A          700 KEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  734 (1688)
T ss_dssp             CTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGS
T ss_pred             HHHHHHHHHHhCCCccccccCcEEEEEcCCCeeec
Confidence            99999999999998 678999999876  997653

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.98  E-value=1.3e-32  Score=269.79  Aligned_cols=228  Identities=19%  Similarity=0.150  Sum_probs=178.3

Q ss_pred             cccCCcEEEEecCCCc-hHHHHHHHHHHcCCeEEEe-eCcchhhHhHHHHhcc-CCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARG-IGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIGS-SSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         8 ~~~~~k~~lItGas~g-iG~~ia~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~-~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      +++.+|++|||||++| ||+++|++|+++|++|+++ +|+.+.++++.+++.. ....+.++.++.+|++|.++++++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            4688999999999998 9999999999999999998 5777777666555522 11112358899999999999999999


Q ss_pred             HHHHH-----cC-CccEEEeCCCCCCCCCC-CCCCCC--HHHHHHHHhhhchhhhHHHHHH--H---------------h
Q 044485           85 TAVTQ-----YG-KLDIMFNNAGTVDEVKP-NILDND--QAEFERILSINLVGAFLGRNML--L---------------G  138 (257)
Q Consensus        85 ~~~~~-----~~-~id~lv~~ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~---------------s  138 (257)
                      ++.+.     +| ++|+||||||+...  . ++.+.+  .++|++++++|+.+++.+.+.+  .               |
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~--~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS  828 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQ--GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSP  828 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCC--SBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECS
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCC--CCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcC
Confidence            99988     66 89999999998654  4 678888  8999999999999999987765  2               2


Q ss_pred             hhccccCCCCchhhhhHHHHHHH-HHHHHHHhccCCcEEEeecCCCcc-ChhhHhHhhhhhccccCcc-ccccCCCCCHH
Q 044485          139 VCGIIGGAATHAYTSSKHGLLGL-MKNTAVELGRFGIRVNCVSPYAVS-TPLAKDFLKLADDGLGGMY-SNLKGAVLEPE  215 (257)
Q Consensus       139 ~~~~~~~~~~~~y~~sK~a~~~~-~~~l~~e~~~~gi~v~~i~pg~v~-t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  215 (257)
                      ..+..+  ....|++||+|+++| ++.++.+++++ |+||+|+||+++ |++.....     ...... ..+. +..+|+
T Consensus       829 ~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~-----~~~~~~~~~pl-r~~sPE  899 (1887)
T 2uv8_A          829 NHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANN-----IIAEGIEKMGV-RTFSQK  899 (1887)
T ss_dssp             CTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CC-----TTHHHHHTTSC-CCEEHH
T ss_pred             hHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccch-----hHHHHHHhcCC-CCCCHH
Confidence            222222  467899999999999 89999999888 999999999999 78754210     000001 1122 566899


Q ss_pred             HHHHHHHHhcCCC-CCcccccEEEec--Cceeee
Q 044485          216 DAAEAALYLGSDE-SKCVSGHNLVVD--GGFAIV  246 (257)
Q Consensus       216 ~~a~~~~~l~s~~-~~~~~G~~~~~d--gG~~~~  246 (257)
                      |+|+.++||+++. ..+++|+.+.+|  ||....
T Consensus       900 EVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~  933 (1887)
T 2uv8_A          900 EMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  933 (1887)
T ss_dssp             HHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTS
T ss_pred             HHHHHHHHHhCCCccccccCcEEEEECCCCeecc
Confidence            9999999999998 678999999875  997543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.98  E-value=4.2e-31  Score=209.59  Aligned_cols=185  Identities=18%  Similarity=0.146  Sum_probs=156.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      ++|||||+++||++++++|+ +|++|++++|+.+                    .+.+|++|+++++++++++    +++
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~--------------------~~~~D~~~~~~~~~~~~~~----~~~   59 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG--------------------DVTVDITNIDSIKKMYEQV----GKV   59 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS--------------------SEECCTTCHHHHHHHHHHH----CCE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc--------------------ceeeecCCHHHHHHHHHHh----CCC
Confidence            79999999999999999999 9999999999863                    3679999999999988765    789


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhccccCCCCchhhhhHHHHHH
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYTSSKHGLLG  160 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~~~~~~~~~~y~~sK~a~~~  160 (257)
                      |+||||||....  .++.+.+.+++.+.+++|+.+++.+.+.+.             |..+..+.+....|+++|++++.
T Consensus        60 d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~  137 (202)
T 3d7l_A           60 DAIVSATGSATF--SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTA  137 (202)
T ss_dssp             EEEEECCCCCCC--CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCC--CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCccHHHHHHHHHHHH
Confidence            999999997654  567888999999999999999999877663             33344556667789999999999


Q ss_pred             HHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEec
Q 044485          161 LMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVD  240 (257)
Q Consensus       161 ~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~d  240 (257)
                      +++.++.|+ ++||+++.|+||+++|++....    +       ..+..++++|+|+|+.++++++   .+++|+.+++|
T Consensus       138 ~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~~----~-------~~~~~~~~~~~dva~~~~~~~~---~~~~G~~~~vd  202 (202)
T 3d7l_A          138 FAKSAAIEM-PRGIRINTVSPNVLEESWDKLE----P-------FFEGFLPVPAAKVARAFEKSVF---GAQTGESYQVY  202 (202)
T ss_dssp             HHHHHTTSC-STTCEEEEEEECCBGGGHHHHG----G-------GSTTCCCBCHHHHHHHHHHHHH---SCCCSCEEEEC
T ss_pred             HHHHHHHHc-cCCeEEEEEecCccCCchhhhh----h-------hccccCCCCHHHHHHHHHHhhh---ccccCceEecC
Confidence            999999999 8899999999999999975321    0       1123457899999999998873   45899999987

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.98  E-value=3.6e-31  Score=210.64  Aligned_cols=189  Identities=22%  Similarity=0.277  Sum_probs=157.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |++|||||++|||++++++|+++  +|++++|+.+.+++..+++..        .++.+|++|++++++++++    +++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~--------~~~~~D~~~~~~~~~~~~~----~~~   66 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA--------RALPADLADELEAKALLEE----AGP   66 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC--------EECCCCTTSHHHHHHHHHH----HCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC--------cEEEeeCCCHHHHHHHHHh----cCC
Confidence            58999999999999999999999  999999998887777766631        6788999999999998886    689


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------HhhhccccCCCCchhhhhHHHHHHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------LGVCGIIGGAATHAYTSSKHGLLGL  161 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------~s~~~~~~~~~~~~y~~sK~a~~~~  161 (257)
                      +|+||||||....  .++.+.+.+++++.+++|+.+++.+.+.+           +|..+..+.+....|+++|++++.+
T Consensus        67 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  144 (207)
T 2yut_A           67 LDLLVHAVGKAGR--ASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAY  144 (207)
T ss_dssp             EEEEEECCCCCCC--BCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHH
T ss_pred             CCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHH
Confidence            9999999998654  66788899999999999999999997766           3444555667788999999999999


Q ss_pred             HHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          162 MKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       162 ~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      ++.++.|++++||++++|+||++.|++....            ..+.+++++|+|+|+.++++++++.
T Consensus       145 ~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~------------~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          145 LEAARKELLREGVHLVLVRLPAVATGLWAPL------------GGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHTTTCEEEEECCCCBCSGGGGGG------------TSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHHhhhCCEEEEEecCcccCCCcccc------------CCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999974321            1233568899999999999998764

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.97  E-value=7.4e-32  Score=263.90  Aligned_cols=229  Identities=21%  Similarity=0.187  Sum_probs=177.6

Q ss_pred             cccCCcEEEEecCCCc-hHHHHHHHHHHcCCeEEEee-CcchhhHhHHHHhc-cCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARG-IGECTARLFSKHGAKVLIAD-IKDDLGESVCKDIG-SSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         8 ~~~~~k~~lItGas~g-iG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~-~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      +++.+|++|||||++| ||+++|++|+++|++|++++ |+.+.+++..+++. .....+.++.++.||++|+++++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            4688999999999999 99999999999999999985 66666655544431 111122458899999999999999999


Q ss_pred             HHHHH---cC-CccEEEeCCCCCCCCCC-CCCCCC--HHHHHHHHhhhchhhhHHHHH--HH---------------hhh
Q 044485           85 TAVTQ---YG-KLDIMFNNAGTVDEVKP-NILDND--QAEFERILSINLVGAFLGRNM--LL---------------GVC  140 (257)
Q Consensus        85 ~~~~~---~~-~id~lv~~ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~---------------s~~  140 (257)
                      ++.+.   +| +||+||||||+...  . ++.+.+  .++|++++++|+.+++.+.+.  ..               |..
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~--~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~a  805 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPEN--GREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNH  805 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCT--TCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCS
T ss_pred             HHHHhhcccCCCCcEEEeCcccccC--CCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchh
Confidence            99988   88 99999999998654  4 788888  899999999999999987654  21               222


Q ss_pred             ccccCCCCchhhhhHHHHHHHHHHHHH-HhccCCcEEEeecCCCcc-ChhhHhHhhhhhccccCccccccCCCCCHHHHH
Q 044485          141 GIIGGAATHAYTSSKHGLLGLMKNTAV-ELGRFGIRVNCVSPYAVS-TPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAA  218 (257)
Q Consensus       141 ~~~~~~~~~~y~~sK~a~~~~~~~l~~-e~~~~gi~v~~i~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  218 (257)
                      +..+  ....|++||+|+++|++.++. +++++ |+||+|+||+++ |+|...... .....   ...+. +..+|+|+|
T Consensus       806 g~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~~~-~~~~~---~~~pl-r~~sPeEVA  877 (1878)
T 2uv9_A          806 GTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSANNL-VAEGV---EKLGV-RTFSQQEMA  877 (1878)
T ss_dssp             SSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHHHH-THHHH---HTTTC-CCBCHHHHH
T ss_pred             hccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccchh-hHHHH---HhcCC-CCCCHHHHH
Confidence            2222  466899999999999987655 57776 999999999999 998643110 00000   01122 456999999


Q ss_pred             HHHHHhcCCCC-CcccccEEEe--cCceeee
Q 044485          219 EAALYLGSDES-KCVSGHNLVV--DGGFAIV  246 (257)
Q Consensus       219 ~~~~~l~s~~~-~~~~G~~~~~--dgG~~~~  246 (257)
                      +.++||+++.. .+++|+.+.+  |||....
T Consensus       878 ~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          878 FNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             HHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             HHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence            99999999987 8899999987  4997654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.97  E-value=9.1e-31  Score=214.54  Aligned_cols=205  Identities=26%  Similarity=0.317  Sum_probs=160.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |++|||||+||||++++++|+++|++|++++|+.+.++.                .+.+|++|+++++++++++   .++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------------~~~~D~~~~~~~~~~~~~~---~~~   62 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA----------------DLSTPGGRETAVAAVLDRC---GGV   62 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------------CTTSHHHHHHHHHHHHHHH---TTC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc----------------cccCCcccHHHHHHHHHHc---CCC
Confidence            689999999999999999999999999999998765321                1468999999999888754   368


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------hhccccC------------
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------VCGIIGG------------  145 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------~~~~~~~------------  145 (257)
                      +|+||||||....         .+.++..+++|+.+++.+.+.+..               ..+..+.            
T Consensus        63 ~d~vi~~Ag~~~~---------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  133 (255)
T 2dkn_A           63 LDGLVCCAGVGVT---------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLA  133 (255)
T ss_dssp             CSEEEECCCCCTT---------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHH
T ss_pred             ccEEEECCCCCCc---------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcc
Confidence            9999999997542         123788999999999998775532               2222222            


Q ss_pred             --------------CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh--hccccCccccccC
Q 044485          146 --------------AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA--DDGLGGMYSNLKG  209 (257)
Q Consensus       146 --------------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~  209 (257)
                                    +....|+.+|++++.+++.++++++++||++++++||++.|++........  ......... +.+
T Consensus       134 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~-~~~  212 (255)
T 2dkn_A          134 GDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVA-PLG  212 (255)
T ss_dssp             TCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCC-TTS
T ss_pred             cchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHH-Hhc
Confidence                          244579999999999999999999999999999999999999876542210  000001001 556


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          210 AVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       210 ~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ++.+++|+|+++++++++...+++|+.+++|||..++
T Consensus       213 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  249 (255)
T 2dkn_A          213 RGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDAL  249 (255)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             CCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence            7899999999999999988778999999999997654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.96  E-value=1.3e-28  Score=221.12  Aligned_cols=203  Identities=18%  Similarity=0.172  Sum_probs=164.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCe-EEEe-eCcc-------------hhhHhHHHHhccCCCCCCCceeEecCCCC
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAK-VLIA-DIKD-------------DLGESVCKDIGSSSSSASGCSYVHCDVTK   75 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~-~r~~-------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~   75 (257)
                      .++++|||||++|||.++|++|+++|++ |+++ +|+.             +.++++.+++...+   .++.++.||++|
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g---~~v~~~~~Dvtd  326 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLG---ATATVVTCDLTD  326 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHT---CEEEEEECCTTS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcC---CEEEEEECCCCC
Confidence            6799999999999999999999999998 7777 8883             45566666665443   358999999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------------Hhh
Q 044485           76 EKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------------LGV  139 (257)
Q Consensus        76 ~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------------~s~  139 (257)
                      +++++++++++. .+++||+||||||+...  .++.+.+.+++++++++|+.+++++.+.+                +|.
T Consensus       327 ~~~v~~~~~~i~-~~g~id~vVh~AGv~~~--~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~  403 (525)
T 3qp9_A          327 AEAAARLLAGVS-DAHPLSAVLHLPPTVDS--EPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSV  403 (525)
T ss_dssp             HHHHHHHHHTSC-TTSCEEEEEECCCCCCC--CCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEG
T ss_pred             HHHHHHHHHHHH-hcCCCcEEEECCcCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCH
Confidence            999999999998 78999999999999765  78999999999999999999999986655                355


Q ss_pred             hccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHH
Q 044485          140 CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAE  219 (257)
Q Consensus       140 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  219 (257)
                      .+..+.++...|+++|+++++|+    ++++++||++++|+||+++|+|.........      ........++|+++++
T Consensus       404 a~~~g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~~~~~~------~~~~g~~~l~pee~a~  473 (525)
T 3qp9_A          404 AAIWGGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEGATGER------LRRLGLRPLAPATALT  473 (525)
T ss_dssp             GGTTCCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSSHHHHH------HHHTTBCCBCHHHHHH
T ss_pred             HHcCCCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccchhhHHH------HHhcCCCCCCHHHHHH
Confidence            67777888899999999999874    5677889999999999999998732111000      0011113578999999


Q ss_pred             HHHHhcCCCC
Q 044485          220 AALYLGSDES  229 (257)
Q Consensus       220 ~~~~l~s~~~  229 (257)
                      .+.++++...
T Consensus       474 ~l~~~l~~~~  483 (525)
T 3qp9_A          474 ALDTALGHGD  483 (525)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHhCCC
Confidence            9999997654

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.96  E-value=2.1e-29  Score=257.24  Aligned_cols=234  Identities=18%  Similarity=0.153  Sum_probs=171.0

Q ss_pred             ccCCcEEEEecCCCc-hHHHHHHHHHHcCCeEEEeeCcchh-----hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHH
Q 044485            9 RLQGKVALITGGARG-IGECTARLFSKHGAKVLIADIKDDL-----GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENA   82 (257)
Q Consensus         9 ~~~~k~~lItGas~g-iG~~ia~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   82 (257)
                      .+.||++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++...+   .++..+.+|++|+++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G---~~~~~v~~Dvtd~~~v~~l 2209 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFD---ATLWVVPANMASYSDIDKL 2209 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTT---CEEEEEECCTTCHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcC---CeEEEEEecCCCHHHHHHH
Confidence            488999999999999 9999999999999999999998766     566666665432   3478899999999999999


Q ss_pred             HHHHHH----HcCCccEEEeCCCCCC---CCCCCCCCCCHHHH----HHHHhhhchhhhHHHHHHHhhhccc--------
Q 044485           83 VNTAVT----QYGKLDIMFNNAGTVD---EVKPNILDNDQAEF----ERILSINLVGAFLGRNMLLGVCGII--------  143 (257)
Q Consensus        83 ~~~~~~----~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~----~~~~~~n~~~~~~l~~~~~s~~~~~--------  143 (257)
                      ++++.+    .+|++|+||||||+..   +......+.+.++|    +..+++|+.+++.+.+.+.......        
T Consensus      2210 v~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~i 2289 (3089)
T 3zen_D         2210 VEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHV 2289 (3089)
T ss_dssp             HHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred             HHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEE
Confidence            999988    8899999999999711   11112222233333    4458999999998876664322100        


Q ss_pred             -----c----CCCCchhhhhHHHHHHHHHHHHHH--hccCCcEEEeecCCCcc-ChhhHhHhhhhhccccCccccccCCC
Q 044485          144 -----G----GAATHAYTSSKHGLLGLMKNTAVE--LGRFGIRVNCVSPYAVS-TPLAKDFLKLADDGLGGMYSNLKGAV  211 (257)
Q Consensus       144 -----~----~~~~~~y~~sK~a~~~~~~~l~~e--~~~~gi~v~~i~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~  211 (257)
                           +    .+....|++||+|+++|+|+|+.|  +++ +|++|+++||+++ |++.......     .........+.
T Consensus      2290 i~~~ss~~g~~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~~-----~~~~~~~~~r~ 2363 (3089)
T 3zen_D         2290 VLPGSPNRGMFGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDAI-----VSAVEEAGVTT 2363 (3089)
T ss_dssp             EEEECSSTTSCSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTTT-----HHHHGGGSCBC
T ss_pred             EEECCcccccCCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchhH-----HHHHHhcCCCC
Confidence                 0    122347999999999999999999  665 6999999999998 6654321100     00011111234


Q ss_pred             CCHHHHHHHHHHhcCCCCCc-ccccEEEec--Cceeeeeccee
Q 044485          212 LEPEDAAEAALYLGSDESKC-VSGHNLVVD--GGFAIVNAGFS  251 (257)
Q Consensus       212 ~~~~~~a~~~~~l~s~~~~~-~~G~~~~~d--gG~~~~~~~~~  251 (257)
                      .+|+|+|..++||+|+.+.+ .+|+.+.+|  ||+.-...+++
T Consensus      2364 ~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~ 2406 (3089)
T 3zen_D         2364 YTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMA 2406 (3089)
T ss_dssp             EEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHH
T ss_pred             CCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHH
Confidence            58999999999999998665 466766666  99865444444

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.95  E-value=1.1e-27  Score=212.91  Aligned_cols=203  Identities=16%  Similarity=0.247  Sum_probs=160.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcch---hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGA-KVLIADIKDD---LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +|++|||||++|||.+++++|+++|+ +|++++|+..   ..+++.+++...+   .++.++.||++|+++++++++++.
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g---~~v~~~~~Dvtd~~~v~~~~~~i~  315 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLG---VRVTIAACDAADREALAALLAELP  315 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHTCC
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHH
Confidence            48999999999999999999999999 7999999753   3455666665443   458999999999999999999987


Q ss_pred             HHcCCccEEEeCCCCC-CCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------HhhhccccCCCCchhhhhH
Q 044485           88 TQYGKLDIMFNNAGTV-DEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------LGVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------~s~~~~~~~~~~~~y~~sK  155 (257)
                      +. +++|+||||||+. ..  .++.+.+.+++.+.+++|+.+++++.+.+           +|..+..+.++...|+++|
T Consensus       316 ~~-g~ld~vVh~AGv~~~~--~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaAaK  392 (496)
T 3mje_A          316 ED-APLTAVFHSAGVAHDD--APVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQPGYAAAN  392 (496)
T ss_dssp             TT-SCEEEEEECCCCCCSC--CCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTCHHHHHHH
T ss_pred             Hh-CCCeEEEECCcccCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCcHHHHHHH
Confidence            66 7899999999987 43  67899999999999999999999987765           5777888899999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      +++++|++.+    +.+||++++|+||++.+...........    .+... ....++|++.++.+.+++....
T Consensus       393 a~ldala~~~----~~~Gi~v~sV~pG~w~~~gm~~~~~~~~----~l~~~-g~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          393 AYLDALAEHR----RSLGLTASSVAWGTWGEVGMATDPEVHD----RLVRQ-GVLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHH----HHTTCCCEEEEECEESSSCC------CH----HHHHT-TEEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHH----HhcCCeEEEEECCcccCCccccChHHHH----HHHhc-CCCCCCHHHHHHHHHHHHcCCC
Confidence            9999988754    4569999999999886654322111000    00000 0123589999999999887654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.94  E-value=4e-27  Score=220.53  Aligned_cols=206  Identities=14%  Similarity=0.204  Sum_probs=162.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHH-HcCCe-EEEeeCcc---hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFS-KHGAK-VLIADIKD---DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~-~~g~~-Vi~~~r~~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      .+|++|||||++|||+++|++|+ ++|++ |++++|+.   +..+++.+++...+   .++.++.||++|++++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G---~~v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYG---AEVSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcC---CcEEEEEeecCCHHHHHHHHHH
Confidence            57999999999999999999999 79995 99999984   44556666665443   4589999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------HhhhccccCCCCchhhhhHH
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------LGVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------~s~~~~~~~~~~~~y~~sK~  156 (257)
                      +.+.+ +||+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+         +|..+..+.+++..|+++|+
T Consensus       606 ~~~~~-~id~lVnnAGv~~~--~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l~iV~~SS~ag~~g~~g~~~YaAaka  682 (795)
T 3slk_A          606 IPDEH-PLTAVVHAAGVLDD--GVSESLTVERLDQVLRPKVDGARNLLELIDPDVALVLFSSVSGVLGSGGQGNYAAANS  682 (795)
T ss_dssp             SCTTS-CEEEEEECCCCCCC--CCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTSEEEEEEETHHHHTCSSCHHHHHHHH
T ss_pred             HHHhC-CCEEEEECCCcCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEccHHhcCCCCCCHHHHHHHH
Confidence            88776 89999999999866  78999999999999999999999997765         46778889999999999995


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                          |+++|+++++++||++|+|+||++.|++..........  ..+.... ...+++++..+.+...+....
T Consensus       683 ----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~--~~~~~~g-~~~l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          683 ----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQ--DRLARSG-LLPISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             ----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHH--HHHHHTT-BCCCCHHHHHHHHHHHHTSSC
T ss_pred             ----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHH--HHHHhcC-CCCCCHHHHHHHHHHHHhCCC
Confidence                66667777778899999999999998764432111100  0011111 124577777777766665443

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.93  E-value=1.1e-25  Score=200.55  Aligned_cols=202  Identities=18%  Similarity=0.248  Sum_probs=158.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcch---hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDD---LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++++|||||+||||.+++++|+++|+. |++++|+.+   ..+++.+++...+   .++.++.||++|+++++++++++
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g---~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG---ARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcC---CEEEEEEeCCCCHHHHHHHHHHH
Confidence            5799999999999999999999999995 999999875   3455555554433   34889999999999999999988


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------HhhhccccCCCCchhhhhH
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------LGVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------~s~~~~~~~~~~~~y~~sK  155 (257)
                       +.++++|+||||||....  ..+.+.+.+++.+.+++|+.+++++.+.+           +|..+..+.++...|+++|
T Consensus       302 -~~~g~ld~VIh~AG~~~~--~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~~~Yaaak  378 (486)
T 2fr1_A          302 -GDDVPLSAVFHAAATLDD--GTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGN  378 (486)
T ss_dssp             -CTTSCEEEEEECCCCCCC--CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred             -HhcCCCcEEEECCccCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCCHHHHHHH
Confidence             556899999999998765  67888999999999999999999987766           4566778888899999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccCh-hhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTP-LAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      ++++.|++.+    +.+|+++++|+||++.++ |.....   ..   . ........++++++++.+..++....
T Consensus       379 a~l~~la~~~----~~~gi~v~~i~pG~~~~~gm~~~~~---~~---~-~~~~g~~~i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          379 AYLDGLAQQR----RSDGLPATAVAWGTWAGSGMAEGPV---AD---R-FRRHGVIEMPPETACRALQNALDRAE  442 (486)
T ss_dssp             HHHHHHHHHH----HHTTCCCEEEEECCBC-------------------CTTTTEECBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHH----HhcCCeEEEEECCeeCCCcccchhH---HH---H-HHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            9999987654    456999999999999886 332111   00   0 00011135799999999999887643

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.93  E-value=1.2e-25  Score=182.38  Aligned_cols=194  Identities=15%  Similarity=0.145  Sum_probs=144.2

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCc-eeEecCCCCHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGC-SYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~v~~~~~~   85 (257)
                      ..++++|++|||||+|+||++++++|+++|++|++++|+.+.++++.+.         .+ .++.+|++  +       .
T Consensus        16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~---------~~~~~~~~Dl~--~-------~   77 (236)
T 3e8x_A           16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER---------GASDIVVANLE--E-------D   77 (236)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT---------TCSEEEECCTT--S-------C
T ss_pred             ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC---------CCceEEEcccH--H-------H
Confidence            4578899999999999999999999999999999999998876655432         27 88999998  2       3


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhccccC---CCCchh
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGIIGG---AATHAY  151 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~~~~---~~~~~y  151 (257)
                      +.+.++++|+||||||....          +++.+.+++|+.++.++.+.+.           +..+..+.   .....|
T Consensus        78 ~~~~~~~~D~vi~~ag~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~~Y  147 (236)
T 3e8x_A           78 FSHAFASIDAVVFAAGSGPH----------TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRHY  147 (236)
T ss_dssp             CGGGGTTCSEEEECCCCCTT----------SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSCGGGHHH
T ss_pred             HHHHHcCCCEEEECCCCCCC----------CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCChhhhhhH
Confidence            33445689999999996532          3478899999999999876662           21222221   345689


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      +.+|++++.+++       ..||+++.++||++.++..........      .......+++++|+|+++++++++..  
T Consensus       148 ~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~------~~~~~~~~i~~~Dva~~~~~~~~~~~--  212 (236)
T 3e8x_A          148 LVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSP------HFSEITRSITRHDVAKVIAELVDQQH--  212 (236)
T ss_dssp             HHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEES------SCSCCCCCEEHHHHHHHHHHHTTCGG--
T ss_pred             HHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEecc------CCCcccCcEeHHHHHHHHHHHhcCcc--
Confidence            999999999876       479999999999999985432111000      01112457899999999999998754  


Q ss_pred             ccccEEEecCce
Q 044485          232 VSGHNLVVDGGF  243 (257)
Q Consensus       232 ~~G~~~~~dgG~  243 (257)
                      ..|+.+++++|.
T Consensus       213 ~~g~~~~v~~~~  224 (236)
T 3e8x_A          213 TIGKTFEVLNGD  224 (236)
T ss_dssp             GTTEEEEEEECS
T ss_pred             ccCCeEEEeCCC
Confidence            789999998884

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.92  E-value=8.4e-25  Score=195.63  Aligned_cols=197  Identities=21%  Similarity=0.280  Sum_probs=157.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcch---hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDD---LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++++|||||+||||.+++++|+++|+ +|++++|+..   ..++..+++...+   .++.++.||++|++++++++++ 
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g---~~v~~~~~Dvtd~~~v~~~~~~-  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHG---CEVVHAACDVAERDALAALVTA-  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTT---CEEEEEECCSSCHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcC---CEEEEEEeCCCCHHHHHHHHhc-
Confidence            579999999999999999999999999 5999999874   3455666665432   4588999999999999998876 


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH------------HhhhccccCCCCchhhhh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML------------LGVCGIIGGAATHAYTSS  154 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~------------~s~~~~~~~~~~~~y~~s  154 (257)
                          +++|+||||||+...  ..+.+.+.+++.+.+++|+.+++++.+.+            +|..+..+.++...|+++
T Consensus       334 ----~~ld~VVh~AGv~~~--~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~~~Yaaa  407 (511)
T 2z5l_A          334 ----YPPNAVFHTAGILDD--AVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQGAYAAA  407 (511)
T ss_dssp             ----SCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTBHHHHHH
T ss_pred             ----CCCcEEEECCcccCC--cccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCCHHHHHH
Confidence                689999999998765  67888999999999999999999986654            345567777888899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCc-cChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAV-STPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      |++++.|++.+    +.+|+++++|+||++ +|+|........   .    .......++|+++++.+..++...
T Consensus       408 Ka~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~~~~~---~----~~~g~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          408 NAALDALAERR----RAAGLPATSVAWGLWGGGGMAAGAGEES---L----SRRGLRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             HHHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCHHHHH---H----HHHTBCCBCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHH----HHcCCcEEEEECCcccCCcccccccHHH---H----HhcCCCCCCHHHHHHHHHHHHhCC
Confidence            99999999865    356999999999998 777754321100   0    000113578999999999988654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.92  E-value=1.3e-24  Score=185.89  Aligned_cols=216  Identities=14%  Similarity=0.078  Sum_probs=160.2

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHc-CC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKH-GA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~-g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      ...+++|++|||||+|+||++++++|+++ |+ +|++++|++...+++.+++..     .++.++.+|++|.+++.++++
T Consensus        16 ~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~-----~~v~~~~~Dl~d~~~l~~~~~   90 (344)
T 2gn4_A           16 QNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND-----PRMRFFIGDVRDLERLNYALE   90 (344)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCC-----TTEEEEECCTTCHHHHHHHTT
T ss_pred             HHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcC-----CCEEEEECCCCCHHHHHHHHh
Confidence            33578899999999999999999999999 98 899999998877777666642     238899999999998887764


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh--------hccccCCCCchhhhhHH
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV--------CGIIGGAATHAYTSSKH  156 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~--------~~~~~~~~~~~y~~sK~  156 (257)
                             ++|+||||||....   +   ....+..+.+++|+.++.++...+...        ++..+..+...|+.+|+
T Consensus        91 -------~~D~Vih~Aa~~~~---~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~~~Y~~sK~  157 (344)
T 2gn4_A           91 -------GVDICIHAAALKHV---P---IAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKL  157 (344)
T ss_dssp             -------TCSEEEECCCCCCH---H---HHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCCSHHHHHHH
T ss_pred             -------cCCEEEECCCCCCC---C---chhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCccHHHHHHH
Confidence                   69999999996531   1   122345688999999999997776321        12222334578999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccc-cC--c-c--ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGL-GG--M-Y--SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~-~~--~-~--~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +.+.+++.+++++++.|+++++++||.+.++............. ..  . .  ......+++++|+|+++++++...  
T Consensus       158 ~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~--  235 (344)
T 2gn4_A          158 CSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRM--  235 (344)
T ss_dssp             HHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhc--
Confidence            99999999999888899999999999998864321111100000 00  0 0  111234689999999999998754  


Q ss_pred             cccccEEEecCce
Q 044485          231 CVSGHNLVVDGGF  243 (257)
Q Consensus       231 ~~~G~~~~~dgG~  243 (257)
                       ..|+.++++++.
T Consensus       236 -~~g~~~~~~~~~  247 (344)
T 2gn4_A          236 -HGGEIFVPKIPS  247 (344)
T ss_dssp             -CSSCEEEECCCE
T ss_pred             -cCCCEEecCCCc
Confidence             368888888764

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.91  E-value=1.2e-23  Score=173.72  Aligned_cols=183  Identities=16%  Similarity=0.103  Sum_probs=139.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||+|+||++++++|+++|++|++++|+....+            ..++.++.+|++|+++++++++       
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~-------   63 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA------------GPNEECVQCDLADANAVNAMVA-------   63 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC------------CTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc------------CCCCEEEEcCCCCHHHHHHHHc-------
Confidence            589999999999999999999999999999999875432            1248899999999999998876       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhcc------------ccCCCC
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGI------------IGGAAT  148 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~------------~~~~~~  148 (257)
                      ++|+||||||....          +.+++.+++|+.+++++.+.+.           |..+.            .+..+.
T Consensus        64 ~~D~vi~~Ag~~~~----------~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~  133 (267)
T 3rft_A           64 GCDGIVHLGGISVE----------KPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPD  133 (267)
T ss_dssp             TCSEEEECCSCCSC----------CCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCC
T ss_pred             CCCEEEECCCCcCc----------CCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCC
Confidence            69999999997422          3478899999999999977662           22222            223445


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      ..|+.||++.+.+++.++.++   |+++++|+||.+.++......              ...+++++++++.+..++...
T Consensus       134 ~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~--------------~~~~~~~~d~a~~~~~~~~~~  196 (267)
T 3rft_A          134 GLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRM--------------LSTWFSHDDFVSLIEAVFRAP  196 (267)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTH--------------HHHBCCHHHHHHHHHHHHHCS
T ss_pred             ChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCc--------------eeeEEcHHHHHHHHHHHHhCC
Confidence            689999999999999999886   788888888887775322110              112568999999998888654


Q ss_pred             CCcccccEEEecCc
Q 044485          229 SKCVSGHNLVVDGG  242 (257)
Q Consensus       229 ~~~~~G~~~~~dgG  242 (257)
                      .  ..+..+++.++
T Consensus       197 ~--~~~~~~~~~s~  208 (267)
T 3rft_A          197 V--LGCPVVWGASA  208 (267)
T ss_dssp             C--CCSCEEEECCC
T ss_pred             C--CCceEEEEeCC
Confidence            3  23344444443

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.91  E-value=1.5e-23  Score=178.19  Aligned_cols=213  Identities=19%  Similarity=0.185  Sum_probs=151.4

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ...++++|++|||||+|+||++++++|+++|++|++++|+.+...+..+.+       .++.++.+|++|++++++++++
T Consensus        14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-------~~v~~~~~Dl~d~~~~~~~~~~   86 (330)
T 2pzm_A           14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-------AGLSVIEGSVTDAGLLERAFDS   86 (330)
T ss_dssp             CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-------TTEEEEECCTTCHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-------CCceEEEeeCCCHHHHHHHHhh
Confidence            345788999999999999999999999999999999999765433222211       2378899999999999988876


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC------C---
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG------A---  146 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~------~---  146 (257)
                      +     ++|+||||||....  .     +.+++.  +++|+.++..+.+.+.          |..+..+.      +   
T Consensus        87 ~-----~~D~vih~A~~~~~--~-----~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E  152 (330)
T 2pzm_A           87 F-----KPTHVVHSAAAYKD--P-----DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDS  152 (330)
T ss_dssp             H-----CCSEEEECCCCCSC--T-----TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTC
T ss_pred             c-----CCCEEEECCccCCC--c-----cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCC
Confidence            5     69999999997532  1     345555  8999999999876652          22222222      1   


Q ss_pred             ---CCchhhhhHHHHHHHHHHHHHHhccCCcE-EEeecCCCccChhhHhHhhhhhccccCccccc-cCCCCCHHHHHH-H
Q 044485          147 ---ATHAYTSSKHGLLGLMKNTAVELGRFGIR-VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAE-A  220 (257)
Q Consensus       147 ---~~~~y~~sK~a~~~~~~~l~~e~~~~gi~-v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~-~  220 (257)
                         ....|+.+|++.+.+++.+  ++....|| ++.+.||. .+++............ ...... ...++.++|+|+ +
T Consensus       153 ~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~a  228 (330)
T 2pzm_A          153 PTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTFYKRLKAGQ-KCFCSDTVRDFLDMSDFLAIA  228 (330)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHHHHHHHTTC-CCCEESCEECEEEHHHHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHHHHHHHcCC-EEeCCCCEecceeHHHHHHHH
Confidence               4568999999999999887  44445567 56777775 4444333222111111 111111 346789999999 9


Q ss_pred             HHHhcCCCCCcccccEEEecCceeeee
Q 044485          221 ALYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       221 ~~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      ++++++...    |+.+++++|..++-
T Consensus       229 ~~~~~~~~~----g~~~~v~~~~~~s~  251 (330)
T 2pzm_A          229 DLSLQEGRP----TGVFNVSTGEGHSI  251 (330)
T ss_dssp             HHHTSTTCC----CEEEEESCSCCEEH
T ss_pred             HHHHhhcCC----CCEEEeCCCCCCCH
Confidence            999997632    89999999976653

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.90  E-value=2.3e-23  Score=177.53  Aligned_cols=222  Identities=16%  Similarity=0.105  Sum_probs=156.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+|++|||||+|+||++++++|+++|++|++++|+.+..++..+.+....+  .++.++.+|++|++++++++++     
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~-----   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITG--KTPAFHETDVSDERALARIFDA-----   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHS--CCCEEECCCTTCHHHHHHHHHH-----
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcC--CCceEEEeecCCHHHHHHHHhc-----
Confidence            458999999999999999999999999999999987766655554432211  2378899999999999998875     


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC------------CCC
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG------------AAT  148 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~------------~~~  148 (257)
                      +++|+||||||....      ....+.....+++|+.++..+...+.          |..+..+.            .+.
T Consensus        77 ~~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~  150 (341)
T 3enk_A           77 HPITAAIHFAALKAV------GESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSAT  150 (341)
T ss_dssp             SCCCEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCS
T ss_pred             cCCcEEEECcccccc------CccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCC
Confidence            479999999997532      11234456788899999998866551          22222221            223


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH----------------hHhhhhhccccCc---------
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK----------------DFLKLADDGLGGM---------  203 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~----------------~~~~~~~~~~~~~---------  203 (257)
                      ..|+.+|.+.+.+++.++.++.  |++++.++|+.+..+...                .............         
T Consensus       151 ~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  228 (341)
T 3enk_A          151 NPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPT  228 (341)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSS
T ss_pred             ChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCC
Confidence            5899999999999999998863  599999999888766321                0010000000000         


Q ss_pred             -cccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeee
Q 044485          204 -YSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       204 -~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                       .......++.++|+|+++++++........|+.+++++|..++.
T Consensus       229 ~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~  273 (341)
T 3enk_A          229 PDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSV  273 (341)
T ss_dssp             TTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEH
T ss_pred             CCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeH
Confidence             01122346789999999999887532235799999999877653

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.89  E-value=1.7e-22  Score=172.15  Aligned_cols=217  Identities=18%  Similarity=0.095  Sum_probs=152.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHh-HHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGES-VCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ++|++|||||+|+||++++++|+++|++|++++|+.+..+. ..+.+..    ..++.++.+|++|++++.++++..   
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGI----ENDVKIIHMDLLEFSNIIRTIEKV---   74 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTC----TTTEEECCCCTTCHHHHHHHHHHH---
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccc----cCceeEEECCCCCHHHHHHHHHhc---
Confidence            46899999999999999999999999999999998765432 2222211    124788999999999999988765   


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhcc------------ccCC
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGI------------IGGA  146 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~------------~~~~  146 (257)
                        ++|+||||||....      +.+.+++...+++|+.++.++.+.+.           |..+.            .+..
T Consensus        75 --~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~  146 (345)
T 2z1m_A           75 --QPDEVYNLAAQSFV------GVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFY  146 (345)
T ss_dssp             --CCSEEEECCCCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             --CCCEEEECCCCcch------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCC
Confidence              69999999996421      11234578889999999998866552           11111            1223


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhc---cCCcEEEeecCCCccChhhHhHhhhh----hccccC-ccc--cccCCCCCHHH
Q 044485          147 ATHAYTSSKHGLLGLMKNTAVELG---RFGIRVNCVSPYAVSTPLAKDFLKLA----DDGLGG-MYS--NLKGAVLEPED  216 (257)
Q Consensus       147 ~~~~y~~sK~a~~~~~~~l~~e~~---~~gi~v~~i~pg~v~t~~~~~~~~~~----~~~~~~-~~~--~~~~~~~~~~~  216 (257)
                      +...|+.+|.+.+.+++.++.+++   ..+++++.+.||...+++........    ...... ...  .....++.++|
T Consensus       147 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~D  226 (345)
T 2z1m_A          147 PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPE  226 (345)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHH
Confidence            356899999999999999999876   44567788899988877643321111    110001 111  11234789999


Q ss_pred             HHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          217 AAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       217 ~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +|+++++++++..    ++.+++.+|..++
T Consensus       227 va~a~~~~~~~~~----~~~~~i~~~~~~s  252 (345)
T 2z1m_A          227 YVEAMWLMMQQPE----PDDYVIATGETHT  252 (345)
T ss_dssp             HHHHHHHHHTSSS----CCCEEECCSCCEE
T ss_pred             HHHHHHHHHhCCC----CceEEEeCCCCcc
Confidence            9999999997643    3577887776544

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.89  E-value=8.1e-24  Score=172.00  Aligned_cols=188  Identities=16%  Similarity=0.120  Sum_probs=136.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ++.+|++|||||+|+||++++++|+++|+  +|++++|+.+.+++...         .++.++.+|++|+++++++++  
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~--   83 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY---------KNVNQEVVDFEKLDDYASAFQ--   83 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG---------GGCEEEECCGGGGGGGGGGGS--
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc---------CCceEEecCcCCHHHHHHHhc--
Confidence            36789999999999999999999999999  99999998765543211         127889999999998877664  


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------hhccccCCCCchhhhhHH
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------VCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------~~~~~~~~~~~~y~~sK~  156 (257)
                           ++|+||||||....         .+.++..+++|+.++..+.+.+..          ..+..+ +....|+.+|+
T Consensus        84 -----~~d~vi~~ag~~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~-~~~~~Y~~sK~  148 (242)
T 2bka_A           84 -----GHDVGFCCLGTTRG---------KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK-SSNFLYLQVKG  148 (242)
T ss_dssp             -----SCSEEEECCCCCHH---------HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-TCSSHHHHHHH
T ss_pred             -----CCCEEEECCCcccc---------cCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCC-CCcchHHHHHH
Confidence                 69999999996421         245678899999999988765521          111111 23468999999


Q ss_pred             HHHHHHHHHHHHhccCCc-EEEeecCCCccChhhHhHh-h-hhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          157 GLLGLMKNTAVELGRFGI-RVNCVSPYAVSTPLAKDFL-K-LADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi-~v~~i~pg~v~t~~~~~~~-~-~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      +++.+++.+       ++ ++++|+||++.|++..... . .......... ....+++++++|+|+++++++++..
T Consensus       149 ~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  218 (242)
T 2bka_A          149 EVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  218 (242)
T ss_dssp             HHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             HHHHHHHhc-------CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCcc
Confidence            999998764       45 8999999999998643211 0 0010000000 0012457899999999999998764

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.89  E-value=3.8e-22  Score=171.19  Aligned_cols=218  Identities=14%  Similarity=0.057  Sum_probs=156.4

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +.+|++|||||+|+||++++++|+++|++|++++|+.+..++..+.+..    ..++.++.+|++|++++.++++..   
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~---   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV----ADGMQSEIGDIRDQNKLLESIREF---   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT----TTTSEEEECCTTCHHHHHHHHHHH---
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhcc----CCceEEEEccccCHHHHHHHHHhc---
Confidence            5679999999999999999999999999999999988766555554431    124889999999999999888765   


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhccc-------------cC
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGII-------------GG  145 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~~-------------~~  145 (257)
                        ++|+||||||...      ...+.+++...+++|+.++..+.+.+.           |..+.+             +.
T Consensus        80 --~~d~vih~A~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~  151 (357)
T 1rkx_A           80 --QPEIVFHMAAQPL------VRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAM  151 (357)
T ss_dssp             --CCSEEEECCSCCC------HHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCB
T ss_pred             --CCCEEEECCCCcc------cccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCC
Confidence              6999999999532      123356678899999999999866552           111111             22


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhc------cCCcEEEeecCCCccChhhH-------hHhhhhhccccCcc--ccccCC
Q 044485          146 AATHAYTSSKHGLLGLMKNTAVELG------RFGIRVNCVSPYAVSTPLAK-------DFLKLADDGLGGMY--SNLKGA  210 (257)
Q Consensus       146 ~~~~~y~~sK~a~~~~~~~l~~e~~------~~gi~v~~i~pg~v~t~~~~-------~~~~~~~~~~~~~~--~~~~~~  210 (257)
                      .+...|+.+|.+.+.+++.++.++.      +.|+++++++||.+.++...       .+............  ......
T Consensus       152 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  231 (357)
T 1rkx_A          152 GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRP  231 (357)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEEC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeec
Confidence            2356899999999999999999885      45999999999999887531       11111000000000  112234


Q ss_pred             CCCHHHHHHHHHHhcCCC--CCcccccEEEecCc
Q 044485          211 VLEPEDAAEAALYLGSDE--SKCVSGHNLVVDGG  242 (257)
Q Consensus       211 ~~~~~~~a~~~~~l~s~~--~~~~~G~~~~~dgG  242 (257)
                      ++.++|+|++++.++...  .....|+.+++.+|
T Consensus       232 ~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          232 WQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             CEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             cEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence            788999999999887531  11235788888764

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.88  E-value=5e-22  Score=169.51  Aligned_cols=212  Identities=17%  Similarity=0.154  Sum_probs=150.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      |++|||||+|+||++++++|+++|++|++++|+. ...++..+.+...    .++.++.+|++|+++++++++..     
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~----~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL----GNFEFVHGDIRNKNDVTRLITKY-----   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT----CCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC----CceEEEEcCCCCHHHHHHHHhcc-----
Confidence            5899999999999999999999999999999853 2223333333321    13788999999999999888752     


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhcccc----------------
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGIIG----------------  144 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~~~----------------  144 (257)
                      ++|+||||||....      +.+.+++...+++|+.++..+.+.+.           |..+..+                
T Consensus        73 ~~d~vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~  146 (347)
T 1orr_A           73 MPDSCFHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTC  146 (347)
T ss_dssp             CCSEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEE
T ss_pred             CCCEEEECCcccCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccc
Confidence            69999999996421      12345678899999999999866552           1111111                


Q ss_pred             ------------CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh---------Hhhh-hhcccc-
Q 044485          145 ------------GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD---------FLKL-ADDGLG-  201 (257)
Q Consensus       145 ------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~---------~~~~-~~~~~~-  201 (257)
                                  ......|+.+|.+.+.+++.++.++   |+++++++||.+.++....         +... ...... 
T Consensus       147 ~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (347)
T 1orr_A          147 VDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGI  223 (347)
T ss_dssp             TTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTC
T ss_pred             cccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccC
Confidence                        1234579999999999999999886   8999999999999875321         1000 000000 


Q ss_pred             --Cc--c--ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCce
Q 044485          202 --GM--Y--SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGF  243 (257)
Q Consensus       202 --~~--~--~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~  243 (257)
                        ..  .  ......++.++|+|+++++++.. ....+|+.+++++|.
T Consensus       224 ~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          224 NKPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             CCCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             CCCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence              00  0  11112367899999999999864 234689999999985

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.88  E-value=1.6e-22  Score=171.00  Aligned_cols=209  Identities=16%  Similarity=0.130  Sum_probs=151.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ..+.+++|||||+|+||++++++|+++|++|++++|+.+. +.    +        ++.++.+|++|+++++++++.   
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l--------~~~~~~~Dl~d~~~~~~~~~~---   72 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P--------NVEMISLDIMDSQRVKKVISD---   72 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T--------TEEEEECCTTCHHHHHHHHHH---
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c--------eeeEEECCCCCHHHHHHHHHh---
Confidence            4566899999999999999999999999999999998754 21    1        278899999999999988875   


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhcccc-------------
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGIIG-------------  144 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~~~-------------  144 (257)
                        +++|+||||||....      ..+.+++...+++|+.++..+.+.+.           |..+..+             
T Consensus        73 --~~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~  144 (321)
T 2pk3_A           73 --IKPDYIFHLAAKSSV------KDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEEN  144 (321)
T ss_dssp             --HCCSEEEECCSCCCH------HHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTS
T ss_pred             --cCCCEEEEcCcccch------hhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCC
Confidence              369999999996532      11223568899999999998866552           1112122             


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh------Hhhhhhc---c---ccCcc--ccccC
Q 044485          145 -GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD------FLKLADD---G---LGGMY--SNLKG  209 (257)
Q Consensus       145 -~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~------~~~~~~~---~---~~~~~--~~~~~  209 (257)
                       ..+...|+.+|.+.+.+++.++.++   |++++.++|+.+.++....      +......   .   .....  .....
T Consensus       145 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  221 (321)
T 2pk3_A          145 QLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVR  221 (321)
T ss_dssp             CCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEE
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEE
Confidence             1345689999999999999998874   8999999999998876431      1111000   0   00011  12233


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeee
Q 044485          210 AVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       210 ~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      .++.++|+|+++++++...   .+|+.+++++|..++-
T Consensus       222 ~~v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~s~  256 (321)
T 2pk3_A          222 DFTDVRDIVQAYWLLSQYG---KTGDVYNVCSGIGTRI  256 (321)
T ss_dssp             EEEEHHHHHHHHHHHHHHC---CTTCEEEESCSCEEEH
T ss_pred             eeEEHHHHHHHHHHHHhCC---CCCCeEEeCCCCCeeH
Confidence            4678999999999998764   4789999999976653

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.88  E-value=2.6e-22  Score=170.80  Aligned_cols=216  Identities=12%  Similarity=-0.001  Sum_probs=152.6

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeE-ecCCCCHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV-HCDVTKEKDIENAVN   84 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~-~~D~~~~~~v~~~~~   84 (257)
                      |...+++|++|||||+|+||++++++|+++|++|++++|+.+..+++.+.+....+  .++.++ .+|++|+++++++++
T Consensus         5 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~   82 (342)
T 1y1p_A            5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP--GRFETAVVEDMLKQGAYDEVIK   82 (342)
T ss_dssp             TCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST--TTEEEEECSCTTSTTTTTTTTT
T ss_pred             cccCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCC--CceEEEEecCCcChHHHHHHHc
Confidence            34457889999999999999999999999999999999988766655544422111  237777 899999988877664


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhccc--cCC-----
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGII--GGA-----  146 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~~--~~~-----  146 (257)
                             ++|+|||||+....  .       +++.+.+++|+.++..+.+.+.           |..+..  +.+     
T Consensus        83 -------~~d~vih~A~~~~~--~-------~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~  146 (342)
T 1y1p_A           83 -------GAAGVAHIASVVSF--S-------NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGI  146 (342)
T ss_dssp             -------TCSEEEECCCCCSC--C-------SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCC
T ss_pred             -------CCCEEEEeCCCCCC--C-------CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCc
Confidence                   69999999997532  1       2356788999999998876552           111111  110     


Q ss_pred             -------------------------CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH---------
Q 044485          147 -------------------------ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF---------  192 (257)
Q Consensus       147 -------------------------~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~---------  192 (257)
                                               +...|+.+|.+.+.+++.++++++. |+++++++||.+.++.....         
T Consensus       147 ~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~  225 (342)
T 1y1p_A          147 YLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGW  225 (342)
T ss_dssp             EECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHH
T ss_pred             ccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHH
Confidence                                     1247999999999999999999876 89999999999988764321         


Q ss_pred             hhhhhccccC-cc-ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCc
Q 044485          193 LKLADDGLGG-MY-SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG  242 (257)
Q Consensus       193 ~~~~~~~~~~-~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG  242 (257)
                      .......... .. ......++.++|+|+++++++...  ..+|+.+..+|+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~--~~~g~~~~~~g~  275 (342)
T 1y1p_A          226 MMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP--QIERRRVYGTAG  275 (342)
T ss_dssp             HHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT--TCCSCEEEECCE
T ss_pred             HHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcCc--ccCCceEEEeCC
Confidence            0000000000 01 112345788999999999888653  256777766665

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.88  E-value=6.4e-23  Score=164.39  Aligned_cols=181  Identities=15%  Similarity=0.174  Sum_probs=138.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC-HHHHHHHHHHHHHHcCC
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK-EKDIENAVNTAVTQYGK   92 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~~~~~   92 (257)
                      ++|||||+|+||++++++|+++|++|++++|+.+..++.           .++.++.+|++| +++++++++       +
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~~~~~D~~d~~~~~~~~~~-------~   63 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-----------NNVKAVHFDVDWTPEEMAKQLH-------G   63 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-----------TTEEEEECCTTSCHHHHHTTTT-------T
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-----------CCceEEEecccCCHHHHHHHHc-------C
Confidence            699999999999999999999999999999998654332           238899999999 888877765       6


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------HhhhccccCCC-------Cchhhhh
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------LGVCGIIGGAA-------THAYTSS  154 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------~s~~~~~~~~~-------~~~y~~s  154 (257)
                      +|+||||||....              ..+++|+.++..+.+.+           ++..+..+.+.       ...|+.+
T Consensus        64 ~d~vi~~ag~~~~--------------~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~s  129 (219)
T 3dqp_A           64 MDAIINVSGSGGK--------------SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIA  129 (219)
T ss_dssp             CSEEEECCCCTTS--------------SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHH
T ss_pred             CCEEEECCcCCCC--------------CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHH
Confidence            9999999997642              15667777777765554           22222222233       5689999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      |.+.+.+++      ...|++++.++||++.++.......         .......+++++|+|+++++++.+..  ..|
T Consensus       130 K~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~---------~~~~~~~~i~~~Dva~~i~~~l~~~~--~~g  192 (219)
T 3dqp_A          130 KHFADLYLT------KETNLDYTIIQPGALTEEEATGLID---------INDEVSASNTIGDVADTIKELVMTDH--SIG  192 (219)
T ss_dssp             HHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEE---------ESSSCCCCEEHHHHHHHHHHHHTCGG--GTT
T ss_pred             HHHHHHHHH------hccCCcEEEEeCceEecCCCCCccc---------cCCCcCCcccHHHHHHHHHHHHhCcc--ccC
Confidence            999999887      3579999999999998874322111         12334567899999999999998754  569


Q ss_pred             cEEEecCce
Q 044485          235 HNLVVDGGF  243 (257)
Q Consensus       235 ~~~~~dgG~  243 (257)
                      +.+++++|.
T Consensus       193 ~~~~i~~g~  201 (219)
T 3dqp_A          193 KVISMHNGK  201 (219)
T ss_dssp             EEEEEEECS
T ss_pred             cEEEeCCCC
Confidence            999997764

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.88  E-value=7.5e-22  Score=167.86  Aligned_cols=211  Identities=16%  Similarity=0.090  Sum_probs=149.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcC--CeEEEeeCcch--hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHG--AKVLIADIKDD--LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++++|||||+|+||++++++|+++|  ++|++++|+..  ..+.. +++..    ..++.++.+|++|++++++++.   
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~----~~~~~~~~~Dl~d~~~~~~~~~---   74 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLED----DPRYTFVKGDVADYELVKELVR---   74 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTT----CTTEEEEECCTTCHHHHHHHHH---
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhcc----CCceEEEEcCCCCHHHHHHHhh---
Confidence            4689999999999999999999997  89999998642  22222 22211    1248899999999999888772   


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-----------hhccc------------c
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-----------VCGII------------G  144 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-----------~~~~~------------~  144 (257)
                          ++|+||||||....      +.+.+++...+++|+.++..+.+.+..           ..+..            +
T Consensus        75 ----~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~  144 (336)
T 2hun_A           75 ----KVDGVVHLAAESHV------DRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDR  144 (336)
T ss_dssp             ----TCSEEEECCCCCCH------HHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBC
T ss_pred             ----CCCEEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCC
Confidence                69999999996431      123456678899999999998665521           11111            2


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh--Hhh-hhhcccc-C---cc--ccccCCCCCHH
Q 044485          145 GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD--FLK-LADDGLG-G---MY--SNLKGAVLEPE  215 (257)
Q Consensus       145 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~--~~~-~~~~~~~-~---~~--~~~~~~~~~~~  215 (257)
                      ......|+.+|.+.+.+++.++.++   |++++.++|+.+.++....  ... ....... .   ..  ......++.++
T Consensus       145 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  221 (336)
T 2hun_A          145 LMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVE  221 (336)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHH
Confidence            2335689999999999999998875   8999999999998876421  100 0000000 0   00  11223567899


Q ss_pred             HHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          216 DAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       216 ~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      |+|+++++++.+.   .+|+.+++++|..++
T Consensus       222 Dva~~~~~~~~~~---~~g~~~~v~~~~~~s  249 (336)
T 2hun_A          222 DHVRAIELVLLKG---ESREIYNISAGEEKT  249 (336)
T ss_dssp             HHHHHHHHHHHHC---CTTCEEEECCSCEEC
T ss_pred             HHHHHHHHHHhCC---CCCCEEEeCCCCccc
Confidence            9999999998653   379999999997654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.88  E-value=5.6e-22  Score=159.10  Aligned_cols=191  Identities=12%  Similarity=0.024  Sum_probs=124.2

Q ss_pred             cEEEEecCCCchHHHHHHHHH-HcCCeEEEeeCcch-hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           13 KVALITGGARGIGECTARLFS-KHGAKVLIADIKDD-LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~-~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      |++|||||+|+||++++++|+ ++|++|++++|+.+ .++++.+.       ..++.++.+|++|+++++++++      
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~------   72 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIID-------HERVTVIEGSFQNPGXLEQAVT------   72 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHT-------STTEEEEECCTTCHHHHHHHHT------
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccC-------CCceEEEECCCCCHHHHHHHHc------
Confidence            789999999999999999999 89999999999987 66554311       1238899999999999988875      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHh-hhchhhhHHHHHHHhhhccccCCCCc----------hhhhhHHHHH
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILS-INLVGAFLGRNMLLGVCGIIGGAATH----------AYTSSKHGLL  159 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~-~n~~~~~~l~~~~~s~~~~~~~~~~~----------~y~~sK~a~~  159 (257)
                       ++|+||||+|...     +.   ...+.+.+. .+.. .   ...+++.....+.+...          .|+.+|.+++
T Consensus        73 -~~d~vv~~ag~~n-----~~---~~~~~~~~~~~~~~-~---iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e  139 (221)
T 3r6d_A           73 -NAEVVFVGAMESG-----SD---MASIVKALSRXNIR-R---VIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQAR  139 (221)
T ss_dssp             -TCSEEEESCCCCH-----HH---HHHHHHHHHHTTCC-E---EEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred             -CCCEEEEcCCCCC-----hh---HHHHHHHHHhcCCC-e---EEEEeeceecCCCCcccccccccccccHHHHHHHHHH
Confidence             6899999998530     00   111111110 0000 0   00012222222222222          7999999999


Q ss_pred             HHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhc--CCCCCcccccEE
Q 044485          160 GLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG--SDESKCVSGHNL  237 (257)
Q Consensus       160 ~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~--s~~~~~~~G~~~  237 (257)
                      .+.+.       .||+++.|+||++.++.........   ..  .....+.+++++|+|+.+++++  ++...++++ .+
T Consensus       140 ~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~---~~--~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~-~~  206 (221)
T 3r6d_A          140 NVLRE-------SNLNYTILRLTWLYNDPEXTDYELI---PE--GAQFNDAQVSREAVVKAIFDILHAADETPFHRT-SI  206 (221)
T ss_dssp             HHHHH-------SCSEEEEEEECEEECCTTCCCCEEE---CT--TSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTE-EE
T ss_pred             HHHHh-------CCCCEEEEechhhcCCCCCcceeec---cC--CccCCCceeeHHHHHHHHHHHHHhcChhhhhcc-ee
Confidence            88764       6999999999999887221110000   00  0111233678999999999999  887665554 44


Q ss_pred             EecCc
Q 044485          238 VVDGG  242 (257)
Q Consensus       238 ~~dgG  242 (257)
                      .+++.
T Consensus       207 ~i~~~  211 (221)
T 3r6d_A          207 GVGEP  211 (221)
T ss_dssp             EEECT
T ss_pred             eecCC
Confidence            55443

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.88  E-value=3e-22  Score=163.31  Aligned_cols=205  Identities=11%  Similarity=0.023  Sum_probs=141.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHc--CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKH--GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++|++|||||+|+||++++++|+++  |++|++++|+.+..++.    .      .++.++.+|++|+++++++++    
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~----~------~~~~~~~~D~~d~~~~~~~~~----   68 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI----G------GEADVFIGDITDADSINPAFQ----   68 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT----T------CCTTEEECCTTSHHHHHHHHT----
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc----C------CCeeEEEecCCCHHHHHHHHc----
Confidence            4689999999999999999999999  89999999987654332    1      237889999999999888775    


Q ss_pred             HcCCccEEEeCCCCCCCCCC-------CCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhccccCCCCc-
Q 044485           89 QYGKLDIMFNNAGTVDEVKP-------NILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGIIGGAATH-  149 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~-------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~~~~~~~~-  149 (257)
                         .+|+||||||.......       ...+...+++.+.+++|+.++..+...+.           |..+..+..... 
T Consensus        69 ---~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~  145 (253)
T 1xq6_A           69 ---GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNK  145 (253)
T ss_dssp             ---TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGG
T ss_pred             ---CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCcccc
Confidence               59999999997532100       01122223345677899999888866552           222222222222 


Q ss_pred             ----hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhc
Q 044485          150 ----AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG  225 (257)
Q Consensus       150 ----~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  225 (257)
                          .|+.+|.+++.+++.       .|+++++++||.+.++..... ............ ...++++++|+|+++++++
T Consensus       146 ~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~Dva~~~~~~~  216 (253)
T 1xq6_A          146 LGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVR-ELLVGKDDELLQ-TDTKTVPRADVAEVCIQAL  216 (253)
T ss_dssp             GGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSS-CEEEESTTGGGG-SSCCEEEHHHHHHHHHHHT
T ss_pred             ccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchh-hhhccCCcCCcC-CCCcEEcHHHHHHHHHHHH
Confidence                356699999988763       689999999999988753211 000000001111 1234678999999999999


Q ss_pred             CCCCCcccccEEEecCce
Q 044485          226 SDESKCVSGHNLVVDGGF  243 (257)
Q Consensus       226 s~~~~~~~G~~~~~dgG~  243 (257)
                      .+..  ..|+.+++++|.
T Consensus       217 ~~~~--~~g~~~~i~~~~  232 (253)
T 1xq6_A          217 LFEE--AKNKAFDLGSKP  232 (253)
T ss_dssp             TCGG--GTTEEEEEEECC
T ss_pred             cCcc--ccCCEEEecCCC
Confidence            7643  579999999864

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.88  E-value=6e-22  Score=170.38  Aligned_cols=217  Identities=17%  Similarity=0.098  Sum_probs=146.5

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHH--cCCeEEEeeCcchhhHh---HH---HHhccCCCCCCCceeEecCCCCHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSK--HGAKVLIADIKDDLGES---VC---KDIGSSSSSASGCSYVHCDVTKEK   77 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~--~g~~Vi~~~r~~~~~~~---~~---~~~~~~~~~~~~v~~~~~D~~~~~   77 (257)
                      |.+++++|+||||||+|+||++++++|++  +|++|++++|+......   ..   .......  ..++.++.+|++|++
T Consensus         4 ~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~   81 (362)
T 3sxp_A            4 IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLI--GFKGEVIAADINNPL   81 (362)
T ss_dssp             SSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGT--TCCSEEEECCTTCHH
T ss_pred             cchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhcc--ccCceEEECCCCCHH
Confidence            45578899999999999999999999999  99999999997641110   00   0000111  124789999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccccCC--
Q 044485           78 DIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGIIGGA--  146 (257)
Q Consensus        78 ~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~~~~--  146 (257)
                      +++++      ...++|+||||||....        +.+++...+++|+.++..+.+.+.         |..+..+..  
T Consensus        82 ~~~~~------~~~~~D~vih~A~~~~~--------~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~  147 (362)
T 3sxp_A           82 DLRRL------EKLHFDYLFHQAAVSDT--------TMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKA  147 (362)
T ss_dssp             HHHHH------TTSCCSEEEECCCCCGG--------GCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCS
T ss_pred             HHHHh------hccCCCEEEECCccCCc--------cccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCC
Confidence            88876      23479999999995421        234568899999999999876652         222233221  


Q ss_pred             ---------CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh----------Hhhhhhccc-cCcc--
Q 044485          147 ---------ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD----------FLKLADDGL-GGMY--  204 (257)
Q Consensus       147 ---------~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~----------~~~~~~~~~-~~~~--  204 (257)
                               +...|+.+|.+.+.+++.++.+     ++++.++|+.+..|....          +........ ....  
T Consensus       148 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (362)
T 3sxp_A          148 PNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEF  222 (362)
T ss_dssp             SBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGG
T ss_pred             CCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECC
Confidence                     2345999999999999988766     566666666665543221          111100000 0000  


Q ss_pred             ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeee
Q 044485          205 SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       205 ~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      ......++.++|+|+++++++....   +| .+++.+|..++-
T Consensus       223 g~~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~~s~  261 (362)
T 3sxp_A          223 GEQLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQARSY  261 (362)
T ss_dssp             GCCEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCEEEH
T ss_pred             CCeEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCCccH
Confidence            1122347789999999999998653   68 999999876653

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.87  E-value=1.1e-21  Score=167.96  Aligned_cols=220  Identities=15%  Similarity=0.024  Sum_probs=154.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch----hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD----LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~----~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      +++++++|||||+|+||++++++|+++|++|++++|+..    .++++.+++....  ..++.++.+|++|+++++++++
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~  101 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQ--WSNFKFIQGDIRNLDDCNNACA  101 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHH--HTTEEEEECCTTSHHHHHHHHT
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhccccc--CCceEEEECCCCCHHHHHHHhc
Confidence            467789999999999999999999999999999999764    2333333221100  0238899999999998888775


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC---------
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG---------  145 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~---------  145 (257)
                             ++|+||||||....      ..+.+++...+++|+.++..+...+.          |..+..+.         
T Consensus       102 -------~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~  168 (352)
T 1sb8_A          102 -------GVDYVLHQAALGSV------PRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVED  168 (352)
T ss_dssp             -------TCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT
T ss_pred             -------CCCEEEECCcccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCC
Confidence                   69999999996431      11345678899999999999876652          22222221         


Q ss_pred             ---CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh----------HhhhhhccccC-cc--ccccC
Q 044485          146 ---AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD----------FLKLADDGLGG-MY--SNLKG  209 (257)
Q Consensus       146 ---~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~----------~~~~~~~~~~~-~~--~~~~~  209 (257)
                         .+...|+.+|.+.+.+++.++.++   |+++++++||.+.++....          +.......... ..  .....
T Consensus       169 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  245 (352)
T 1sb8_A          169 TIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSR  245 (352)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceE
Confidence               134689999999999999998875   8999999999998875321          11100000000 01  11223


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeee
Q 044485          210 AVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       210 ~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      .++.++|+|+++++++... ....|+.+++.+|..++-
T Consensus       246 ~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s~  282 (352)
T 1sb8_A          246 DFCYIENTVQANLLAATAG-LDARNQVYNIAVGGRTSL  282 (352)
T ss_dssp             CCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEEH
T ss_pred             eeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCccH
Confidence            5788999999999888652 235789999998876553

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.87  E-value=1.2e-21  Score=166.86  Aligned_cols=203  Identities=15%  Similarity=0.117  Sum_probs=140.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +++|||||+|+||++++++|+++|++|++++|+....+++..         .++.++.+|++|++++.++++       +
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---------~~~~~~~~Dl~d~~~~~~~~~-------~   77 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY---------LEPECRVAEMLDHAGLERALR-------G   77 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG---------GCCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc---------CCeEEEEecCCCHHHHHHHHc-------C
Confidence            589999999999999999999999999999998765443211         127889999999998887765       5


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhcccc-CCC--------------
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIG-GAA--------------  147 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~-~~~--------------  147 (257)
                      +|+|||||+...        .+.+++...+++|+.++.++.+...          |..+..+ ...              
T Consensus        78 ~d~vih~a~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~  149 (342)
T 2x4g_A           78 LDGVIFSAGYYP--------SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP  149 (342)
T ss_dssp             CSEEEEC--------------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCC
T ss_pred             CCEEEECCccCc--------CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccc
Confidence            999999999642        1235677888999999998866552          2222222 121              


Q ss_pred             --CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhh-H----hHhhhhhccccCccccccCCCCCHHHHHHH
Q 044485          148 --THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA-K----DFLKLADDGLGGMYSNLKGAVLEPEDAAEA  220 (257)
Q Consensus       148 --~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  220 (257)
                        ...|+.+|.+.+.+++.++.   + |++++.++||.+.++.. .    ....................++.++|+|++
T Consensus       150 ~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  225 (342)
T 2x4g_A          150 SGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRG  225 (342)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHH
T ss_pred             cccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHH
Confidence              56899999999999999875   3 89999999999988754 1    111110000000001112236789999999


Q ss_pred             HHHhcCCCCCcccccEEEecCceeeee
Q 044485          221 ALYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       221 ~~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      +++++....   .|+.+++++|. ++.
T Consensus       226 ~~~~~~~~~---~g~~~~v~~~~-~s~  248 (342)
T 2x4g_A          226 LLMALERGR---IGERYLLTGHN-LEM  248 (342)
T ss_dssp             HHHHHHHSC---TTCEEEECCEE-EEH
T ss_pred             HHHHHhCCC---CCceEEEcCCc-ccH
Confidence            999987654   28999999997 543

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.87  E-value=3.7e-21  Score=164.30  Aligned_cols=221  Identities=15%  Similarity=0.113  Sum_probs=147.3

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcC--CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHG--AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      +++.+++|+||||||+|+||.+++++|+++|  +.|+..+|.....  ..+.+.... ...++.++.+|++|++++.+++
T Consensus        18 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~--~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~   94 (346)
T 4egb_A           18 LYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG--NLNNVKSIQ-DHPNYYFVKGEIQNGELLEHVI   94 (346)
T ss_dssp             ------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC--CGGGGTTTT-TCTTEEEEECCTTCHHHHHHHH
T ss_pred             cccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc--chhhhhhhc-cCCCeEEEEcCCCCHHHHHHHH
Confidence            3456788999999999999999999999999  6677777764211  111121111 1124889999999999999988


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccCC-------
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGGA-------  146 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~~-------  146 (257)
                      +..     ++|+|||+|+....      ..+.+++...+++|+.++..+...+.          |..+..+..       
T Consensus        95 ~~~-----~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~  163 (346)
T 4egb_A           95 KER-----DVQVIVNFAAESHV------DRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFT  163 (346)
T ss_dssp             HHH-----TCCEEEECCCCC---------------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBC
T ss_pred             hhc-----CCCEEEECCcccch------hhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcC
Confidence            753     59999999997542      12445677889999999998866552          222222221       


Q ss_pred             ------CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh------Hhhhhhccc-cCcc--ccccCCC
Q 044485          147 ------ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD------FLKLADDGL-GGMY--SNLKGAV  211 (257)
Q Consensus       147 ------~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~------~~~~~~~~~-~~~~--~~~~~~~  211 (257)
                            +...|+.+|.+.+.+++.++.++   |++++.++|+.+.++....      +........ -...  ......+
T Consensus       164 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
T 4egb_A          164 EETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDW  240 (346)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECE
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEee
Confidence                  23579999999999999998874   8999999999988875311      111100000 0000  1122346


Q ss_pred             CCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          212 LEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       212 ~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +.++|+|+++++++....   .|+.+++.+|..++
T Consensus       241 i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~s  272 (346)
T 4egb_A          241 LHVTDHCSAIDVVLHKGR---VGEVYNIGGNNEKT  272 (346)
T ss_dssp             EEHHHHHHHHHHHHHHCC---TTCEEEECCSCCEE
T ss_pred             EEHHHHHHHHHHHHhcCC---CCCEEEECCCCcee
Confidence            789999999999987654   79999999987654

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.87  E-value=4.9e-21  Score=163.57  Aligned_cols=205  Identities=12%  Similarity=0.074  Sum_probs=145.9

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +.++++|+||||||+|+||.+++++|+++|++|++++|+.+.               .++.++.+|++|.+++.++++  
T Consensus        14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------------~~~~~~~~Dl~d~~~~~~~~~--   76 (347)
T 4id9_A           14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG---------------TGGEEVVGSLEDGQALSDAIM--   76 (347)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS---------------SCCSEEESCTTCHHHHHHHHT--
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC---------------CCccEEecCcCCHHHHHHHHh--
Confidence            457889999999999999999999999999999999998754               127889999999999888775  


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhcccc------------
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIG------------  144 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~------------  144 (257)
                           ++|+|||+|+....        +.+.+...+++|+.++..+...+.          |..+.++            
T Consensus        77 -----~~d~vih~A~~~~~--------~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~  143 (347)
T 4id9_A           77 -----GVSAVLHLGAFMSW--------APADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTED  143 (347)
T ss_dssp             -----TCSEEEECCCCCCS--------SGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTT
T ss_pred             -----CCCEEEECCcccCc--------chhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCC
Confidence                 69999999996532        223458899999999999876652          2222222            


Q ss_pred             --CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCcc-------------ChhhHhH--------------hhh
Q 044485          145 --GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVS-------------TPLAKDF--------------LKL  195 (257)
Q Consensus       145 --~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~-------------t~~~~~~--------------~~~  195 (257)
                        ......|+.+|.+.+.+++.++.+   .|++++.++|+.+.             .+.....              ...
T Consensus       144 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~  220 (347)
T 4id9_A          144 HPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAEL  220 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHH
Confidence              233457999999999999998877   48999999999998             4432110              000


Q ss_pred             hhccccC----cc--ccccCCC----CCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          196 ADDGLGG----MY--SNLKGAV----LEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       196 ~~~~~~~----~~--~~~~~~~----~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .......    ..  ......+    +.++|+|++++.++....  ..|+.+++.+|..++
T Consensus       221 ~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~s  279 (347)
T 4id9_A          221 LQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPAD  279 (347)
T ss_dssp             HHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCEE
T ss_pred             HHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCccc
Confidence            0000000    00  1112235    789999999999997653  358999999987655

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.87  E-value=5e-21  Score=151.40  Aligned_cols=187  Identities=16%  Similarity=0.122  Sum_probs=132.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|+++||||+|+||++++++|+++|++|++++|+.+..+...         ..++.++.+|++|+++++++++       
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~-------   66 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG---------PRPAHVVVGDVLQAADVDKTVA-------   66 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS---------CCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc---------CCceEEEEecCCCHHHHHHHHc-------
Confidence            379999999999999999999999999999999876543210         1238899999999998887765       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------HhhhccccC-C----CCchhhhhHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGIIGG-A----ATHAYTSSKH  156 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~~~-~----~~~~y~~sK~  156 (257)
                      .+|+||||+|....  ...           .++|+.++..+...+          .|..+..+. +    ....|+.+|.
T Consensus        67 ~~d~vi~~a~~~~~--~~~-----------~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~  133 (206)
T 1hdo_A           67 GQDAVIVLLGTRND--LSP-----------TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI  133 (206)
T ss_dssp             TCSEEEECCCCTTC--CSC-----------CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHH
T ss_pred             CCCEEEECccCCCC--CCc-----------cchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccccchhHHHHHH
Confidence            58999999996532  111           125556666554433          122222222 2    3467999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCc-cChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccccc
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAV-STPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGH  235 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~  235 (257)
                      +++.+++.       .|++++.++||.+ +++.......       .....+.+.+++++|+|+.+++++.+..  .+|+
T Consensus       134 ~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~  197 (206)
T 1hdo_A          134 RMHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTV-------TLDGRGPSRVISKHDLGHFMLRCLTTDE--YDGH  197 (206)
T ss_dssp             HHHHHHHH-------TCSEEEEECCSEEECCCCCSCCEE-------ESSSCSSCSEEEHHHHHHHHHHTTSCST--TTTC
T ss_pred             HHHHHHHh-------CCCCEEEEeCCcccCCCCCcceEe-------cccCCCCCCccCHHHHHHHHHHHhcCcc--cccc
Confidence            99998853       6899999999998 3432211100       0011111467899999999999998753  7899


Q ss_pred             EEEecCce
Q 044485          236 NLVVDGGF  243 (257)
Q Consensus       236 ~~~~dgG~  243 (257)
                      .++++||.
T Consensus       198 ~~~i~~g~  205 (206)
T 1hdo_A          198 STYPSHQY  205 (206)
T ss_dssp             EEEEECCC
T ss_pred             ceeeeccc
Confidence            99999985

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.87  E-value=2.7e-21  Score=165.99  Aligned_cols=211  Identities=19%  Similarity=0.181  Sum_probs=150.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcch--hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           14 VALITGGARGIGECTARLFSKH-GAKVLIADIKDD--LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ++|||||+|+||++++++|+++ |++|++++|+..  ..+.+ +++..    ..++.++.+|++|++++.+++++.    
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~----   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISE----SNRYNFEHADICDSAEITRIFEQY----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTT----CTTEEEEECCTTCHHHHHHHHHHH----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhc----CCCeEEEECCCCCHHHHHHHHhhc----
Confidence            5999999999999999999998 799999998752  22222 22211    124889999999999999888752    


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh-------------------hcccc-------
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV-------------------CGIIG-------  144 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~-------------------~~~~~-------  144 (257)
                       ++|+||||||....      +.+.+++...+++|+.++..+.+.+...                   .+..+       
T Consensus        73 -~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~  145 (361)
T 1kew_A           73 -QPDAVMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDE  145 (361)
T ss_dssp             -CCSEEEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGG
T ss_pred             -CCCEEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccc
Confidence             79999999996431      2234567789999999999875444221                   11111       


Q ss_pred             ---------------CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh--H----hhh-hhccccC
Q 044485          145 ---------------GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD--F----LKL-ADDGLGG  202 (257)
Q Consensus       145 ---------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~--~----~~~-~~~~~~~  202 (257)
                                     ......|+.+|++.+.+++.++.++   |+++++++||.+.++....  .    ... .......
T Consensus       146 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  222 (361)
T 1kew_A          146 VENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP  222 (361)
T ss_dssp             SCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEE
T ss_pred             ccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCce
Confidence                           1234589999999999999999886   8999999999998886421  1    010 0000000


Q ss_pred             cc--ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          203 MY--SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       203 ~~--~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ..  ......++.++|+|+++++++++.   .+|+.+++++|..++
T Consensus       223 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s  265 (361)
T 1kew_A          223 IYGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEKK  265 (361)
T ss_dssp             EETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEEE
T ss_pred             EcCCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCeee
Confidence            00  112234678999999999998654   479999999998655

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.86  E-value=4.3e-21  Score=163.90  Aligned_cols=211  Identities=14%  Similarity=0.142  Sum_probs=149.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc--CCeEEEeeCcchh-hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKH--GAKVLIADIKDDL-GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~--g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      |++|||||+|+||++++++|+++  |++|++++|+... ..+..+++..     .++.++.+|++|++++.++++     
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dl~d~~~~~~~~~-----   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILG-----DRVELVVGDIADAELVDKLAA-----   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCS-----SSEEEEECCTTCHHHHHHHHT-----
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhcc-----CCeEEEECCCCCHHHHHHHhh-----
Confidence            68999999999999999999999  8999999997531 1122222211     238899999999998887765     


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccc-----------------
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGII-----------------  143 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~-----------------  143 (257)
                        .+|+||||||....      +.+.+++...+++|+.++..+.+.+.         |..+..                 
T Consensus        75 --~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~  146 (348)
T 1oc2_A           75 --KADAIVHYAAESHN------DNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPG  146 (348)
T ss_dssp             --TCSEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTT
T ss_pred             --cCCEEEECCcccCc------cchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCcccccccccccccC
Confidence              47999999996431      12335567889999999999876652         222111                 


Q ss_pred             -------cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh--H----hhh-hhccccCcc--ccc
Q 044485          144 -------GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD--F----LKL-ADDGLGGMY--SNL  207 (257)
Q Consensus       144 -------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~--~----~~~-~~~~~~~~~--~~~  207 (257)
                             +......|+.+|.+.+.+++.++.++   |++++.++||.+.++....  .    ... .........  ...
T Consensus       147 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (348)
T 1oc2_A          147 EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKN  223 (348)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCC
T ss_pred             CCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCc
Confidence                   12234689999999999999998876   8999999999998876421  1    110 000000000  112


Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeee
Q 044485          208 KGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       208 ~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      ...++.++|+|+++++++.+.   .+|+.+++++|..++.
T Consensus       224 ~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~s~  260 (348)
T 1oc2_A          224 VRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEKNN  260 (348)
T ss_dssp             EEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEEEH
T ss_pred             eEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCCCH
Confidence            235788999999999998654   4799999999876553

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.86  E-value=1.7e-21  Score=164.06  Aligned_cols=205  Identities=16%  Similarity=0.109  Sum_probs=146.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      ++|||||+|+||++++++|+++|++|++++|..+...+   .+.      ..+.++.+|++|++++++++++.     ++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~~------~~~~~~~~Dl~~~~~~~~~~~~~-----~~   67 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NVP------KGVPFFRVDLRDKEGVERAFREF-----RP   67 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GSC------TTCCEECCCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hcc------cCeEEEECCCCCHHHHHHHHHhc-----CC
Confidence            69999999999999999999999999999885432111   111      12678899999999998887642     69


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhh-ccccC-------------CCCc
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVC-GIIGG-------------AATH  149 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~-~~~~~-------------~~~~  149 (257)
                      |+|||+|+....      ..+.+++...+++|+.++..+.+.+.          |.. +..+.             .+..
T Consensus        68 d~vi~~a~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~  141 (311)
T 2p5y_A           68 THVSHQAAQASV------KVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKS  141 (311)
T ss_dssp             SEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCS
T ss_pred             CEEEECccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCC
Confidence            999999996431      12345678899999999999866551          111 22211             1346


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh---------Hhhh--hhccccCc-----c-ccccCCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD---------FLKL--ADDGLGGM-----Y-SNLKGAVL  212 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~---------~~~~--~~~~~~~~-----~-~~~~~~~~  212 (257)
                      .|+.+|++.+.+++.++.++   |+++++++|+.+.+|....         +...  ........     . ......++
T Consensus       142 ~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  218 (311)
T 2p5y_A          142 PYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYV  218 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEE
T ss_pred             hHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeE
Confidence            89999999999999998875   8999999999998875321         1110  00000000     0 11223567


Q ss_pred             CHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          213 EPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       213 ~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .++|+|+++++++...     |+.+++++|..++
T Consensus       219 ~v~Dva~a~~~~~~~~-----~~~~~i~~~~~~s  247 (311)
T 2p5y_A          219 YVGDVAEAHALALFSL-----EGIYNVGTGEGHT  247 (311)
T ss_dssp             EHHHHHHHHHHHHHHC-----CEEEEESCSCCEE
T ss_pred             EHHHHHHHHHHHHhCC-----CCEEEeCCCCCcc
Confidence            8999999999988653     8899999987655

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.86  E-value=5.8e-21  Score=166.02  Aligned_cols=163  Identities=19%  Similarity=0.241  Sum_probs=122.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHH-HcCCeEEEeeCcchh---------hHhHHHHhccCCCC--CCC---ceeEecCCCCH
Q 044485           12 GKVALITGGARGIGECTARLFS-KHGAKVLIADIKDDL---------GESVCKDIGSSSSS--ASG---CSYVHCDVTKE   76 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~-~~g~~Vi~~~r~~~~---------~~~~~~~~~~~~~~--~~~---v~~~~~D~~~~   76 (257)
                      ++++|||||+|+||++++++|+ ++|++|++++|+...         .+.+.+.+....+.  ..+   +.++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4689999999999999999999 999999999987543         23332222222111  113   78899999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccCC
Q 044485           77 KDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGGA  146 (257)
Q Consensus        77 ~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~~  146 (257)
                      +++++++++    ++++|+|||||+....      ..+.+++...+++|+.++..+.+.+.          |..+..+..
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~  151 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAV------GESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNP  151 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSC
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCc------CcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCC
Confidence            998887763    4569999999996532      11345678899999999999876551          223333322


Q ss_pred             C-------------------CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccCh
Q 044485          147 A-------------------THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTP  187 (257)
Q Consensus       147 ~-------------------~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~  187 (257)
                      .                   ...|+.+|++.+.+++.++.++   |+++++++|+.+..+
T Consensus       152 ~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~  208 (397)
T 1gy8_A          152 TMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGA  208 (397)
T ss_dssp             CC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECC
T ss_pred             CcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCC
Confidence            2                   4689999999999999999887   899999999988665

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.86  E-value=6e-21  Score=163.26  Aligned_cols=222  Identities=12%  Similarity=0.011  Sum_probs=156.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCC--CCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSS--ASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .+.+|++|||||+|+||++++++|+++|++|++++|+........+.+......  ..++.++.+|++|++++.++++  
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   99 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--   99 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--
Confidence            456799999999999999999999999999999999765444444433321100  0238899999999998888775  


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC-----------
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG-----------  145 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~-----------  145 (257)
                           ++|+|||+|+....      ..+.+++...+++|+.++..+...+.          |..+..+.           
T Consensus       100 -----~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~  168 (351)
T 3ruf_A          100 -----GVDHVLHQAALGSV------PRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENI  168 (351)
T ss_dssp             -----TCSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCC
T ss_pred             -----CCCEEEECCccCCc------chhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCC
Confidence                 69999999996432      22345667889999999999876652          22222221           


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh----------Hhhh-hhccccCcc--ccccCCC
Q 044485          146 -AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD----------FLKL-ADDGLGGMY--SNLKGAV  211 (257)
Q Consensus       146 -~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~----------~~~~-~~~~~~~~~--~~~~~~~  211 (257)
                       .+...|+.+|.+.+.+++.++.++   |++++.++|+.+.++....          +... .........  ......+
T Consensus       169 ~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~  245 (351)
T 3ruf_A          169 GNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDF  245 (351)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEee
Confidence             124579999999999999998875   8999999999998764321          1111 010000000  1222357


Q ss_pred             CCHHHHHHHHHHhcCCCCCcccccEEEecCceeeee
Q 044485          212 LEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       212 ~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      +.++|+|++++.++... ....|+.+++.+|..++-
T Consensus       246 i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s~  280 (351)
T 3ruf_A          246 CYIDNVIQMNILSALAK-DSAKDNIYNVAVGDRTTL  280 (351)
T ss_dssp             EEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEEH
T ss_pred             EEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCcccH
Confidence            78999999999887652 235799999998876653

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.86  E-value=6.6e-21  Score=162.10  Aligned_cols=207  Identities=16%  Similarity=0.124  Sum_probs=141.0

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ...+++|++|||||+|+||++++++|+++|++|++++|+.....+.   +...    .++.++.+|++|+++++++++. 
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~~----~~~~~~~~Dl~d~~~~~~~~~~-   87 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKDH----PNLTFVEGSIADHALVNQLIGD-   87 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCCC----TTEEEEECCTTCHHHHHHHHHH-
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhhc----CCceEEEEeCCCHHHHHHHHhc-
Confidence            3456789999999999999999999999999999999986432221   1111    2378899999999999888875 


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhcccc----C-------
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIG----G-------  145 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~----~-------  145 (257)
                          +++|+||||||....  .     +.+++.  +++|+.++..+.+.+.          |..+..+    .       
T Consensus        88 ----~~~D~vih~A~~~~~--~-----~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E  154 (333)
T 2q1w_A           88 ----LQPDAVVHTAASYKD--P-----DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDH  154 (333)
T ss_dssp             ----HCCSEEEECCCCCSC--T-----TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTS
T ss_pred             ----cCCcEEEECceecCC--C-----ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCC
Confidence                269999999997542  1     234444  8999999999876652          2233333    1       


Q ss_pred             --CCC-chhhhhHHHHHHHHHH-HHHHhccCCcEEEeecCCCccChh-----hHhHhhhhhccccCcc-ccccCCCCCHH
Q 044485          146 --AAT-HAYTSSKHGLLGLMKN-TAVELGRFGIRVNCVSPYAVSTPL-----AKDFLKLADDGLGGMY-SNLKGAVLEPE  215 (257)
Q Consensus       146 --~~~-~~y~~sK~a~~~~~~~-l~~e~~~~gi~v~~i~pg~v~t~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~  215 (257)
                        .+. ..|+.+|.+.+.+++. ++        ++..++|+.+..+.     ...+........ ... ......++.++
T Consensus       155 ~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~  225 (333)
T 2q1w_A          155 PRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK-KCFVTKARRDFVFVK  225 (333)
T ss_dssp             CCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHHHHHHHHHHTTC-CCEEEECEECEEEHH
T ss_pred             CCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHHHHHHHHHHcCC-eeeCCCceEeeEEHH
Confidence              223 7899999999999987 55        45556666554443     111111110110 111 23345678999


Q ss_pred             HHHHHHHHhcCCCCCcccccEEEecCceeeee
Q 044485          216 DAAEAALYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       216 ~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      |+|++++++++...    |+.+++++|..++-
T Consensus       226 Dva~ai~~~~~~~~----g~~~~v~~~~~~s~  253 (333)
T 2q1w_A          226 DLARATVRAVDGVG----HGAYHFSSGTDVAI  253 (333)
T ss_dssp             HHHHHHHHHHTTCC----CEEEECSCSCCEEH
T ss_pred             HHHHHHHHHHhcCC----CCEEEeCCCCCccH
Confidence            99999999997653    89999999876653

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.86  E-value=6.8e-22  Score=166.43  Aligned_cols=207  Identities=18%  Similarity=0.121  Sum_probs=147.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |++|||||+|+||++++++|+++|++|++++|+.+...+..         ...+.++.+|++|.+ +.++++       .
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~Dl~d~~-~~~~~~-------~   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---------NPSAELHVRDLKDYS-WGAGIK-------G   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS---------CTTSEEECCCTTSTT-TTTTCC-------C
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc---------CCCceEEECccccHH-HHhhcC-------C
Confidence            47999999999999999999999999999999876543321         123788999999987 655443       3


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhcccc------------CCCCch
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIG------------GAATHA  150 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~------------~~~~~~  150 (257)
                       |+|||||+...      ...+.+++...+++|+.++.++.+.+.          |..+..+            ..+...
T Consensus        64 -d~vih~A~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~  136 (312)
T 3ko8_A           64 -DVVFHFAANPE------VRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISV  136 (312)
T ss_dssp             -SEEEECCSSCS------SSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             -CEEEECCCCCC------chhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCCh
Confidence             99999999542      233445578889999999999876552          2222222            223568


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh-----HhhhhhccccC--cc--ccccCCCCCHHHHHHHH
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD-----FLKLADDGLGG--MY--SNLKGAVLEPEDAAEAA  221 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~-----~~~~~~~~~~~--~~--~~~~~~~~~~~~~a~~~  221 (257)
                      |+.+|.+.+.+++.++.++   |++++.++||.+.++....     ...........  ..  ......++.++|+|+++
T Consensus       137 Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  213 (312)
T 3ko8_A          137 YGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEAT  213 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHH
Confidence            9999999999999999886   8999999999998885321     11110000000  01  11223567899999999


Q ss_pred             HHhcCC-CCCcccccEEEecCceeee
Q 044485          222 LYLGSD-ESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       222 ~~l~s~-~~~~~~G~~~~~dgG~~~~  246 (257)
                      ++++.. ......|+.+++.+|..++
T Consensus       214 ~~~~~~~~~~~~~~~~~ni~~~~~~s  239 (312)
T 3ko8_A          214 LAAWKKFEEMDAPFLALNVGNVDAVR  239 (312)
T ss_dssp             HHHHHHHHHSCCSEEEEEESCSSCEE
T ss_pred             HHHHHhccccCCCCcEEEEcCCCcee
Confidence            999876 1223578999999987655

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.85  E-value=7e-21  Score=164.18  Aligned_cols=213  Identities=15%  Similarity=0.168  Sum_probs=152.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCC-CHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKH-GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT-KEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~v~~~~~~~   86 (257)
                      .+..|+||||||+|+||.+++++|+++ |++|++++|+.+..++..+.        .++.++.+|++ |.+++.++++  
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~--------~~v~~~~~Dl~~d~~~~~~~~~--   90 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKH--------ERMHFFEGDITINKEWVEYHVK--   90 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGS--------TTEEEEECCTTTCHHHHHHHHH--
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccC--------CCeEEEeCccCCCHHHHHHHhc--
Confidence            466789999999999999999999999 99999999988665444321        23889999999 9999988876  


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccccC------------
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGIIGG------------  145 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~~~------------  145 (257)
                           ++|+|||+|+....      ....++....+++|+.++..+.....         |..+.++.            
T Consensus        91 -----~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~  159 (372)
T 3slg_A           91 -----KCDVILPLVAIATP------ATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASA  159 (372)
T ss_dssp             -----HCSEEEECBCCCCH------HHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCCCSSBCTTTCC
T ss_pred             -----cCCEEEEcCccccH------HHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCCCCCCCccccc
Confidence                 49999999997542      11234567788999999998866552         22222221            


Q ss_pred             -------CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH--------------hHhhhh-hccccCc
Q 044485          146 -------AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK--------------DFLKLA-DDGLGGM  203 (257)
Q Consensus       146 -------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~--------------~~~~~~-~~~~~~~  203 (257)
                             .+...|+.+|.+.+.+++.++.+    |+++++++|+.+.++...              .+.... ....-..
T Consensus       160 ~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (372)
T 3slg_A          160 LTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISL  235 (372)
T ss_dssp             EEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEE
T ss_pred             cccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEE
Confidence                   12237999999999999988765    899999999998776522              111110 1000001


Q ss_pred             c--ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecC-ceeee
Q 044485          204 Y--SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDG-GFAIV  246 (257)
Q Consensus       204 ~--~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dg-G~~~~  246 (257)
                      .  ......++.++|+|++++.++........|+.+++.+ |..++
T Consensus       236 ~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s  281 (372)
T 3slg_A          236 VDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFS  281 (372)
T ss_dssp             GGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEE
T ss_pred             eCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCcc
Confidence            1  1222347789999999999997765446799999999 55554

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.85  E-value=4.9e-21  Score=161.36  Aligned_cols=205  Identities=14%  Similarity=0.147  Sum_probs=144.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |++|||||+|+||++++++|+++|..|++..|+....+..          ...+.++.+|+++ +++.++++       +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~----------~~~~~~~~~Dl~~-~~~~~~~~-------~   63 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV----------NEAARLVKADLAA-DDIKDYLK-------G   63 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS----------CTTEEEECCCTTT-SCCHHHHT-------T
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc----------CCCcEEEECcCCh-HHHHHHhc-------C
Confidence            5899999999999999999999995566555554332211          1237889999999 88777665       6


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccc------------cCCCCch
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGII------------GGAATHA  150 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~------------~~~~~~~  150 (257)
                      +|+|||+|+...      ...+.+++...+++|+.++.++...+.          |..+..            +..+...
T Consensus        64 ~d~vih~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~  137 (313)
T 3ehe_A           64 AEEVWHIAANPD------VRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISL  137 (313)
T ss_dssp             CSEEEECCCCCC------CC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             CCEEEECCCCCC------hhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCH
Confidence            999999999542      223345578899999999999876652          222222            2233567


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh-----HhhhhhccccC--cc--ccccCCCCCHHHHHHHH
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD-----FLKLADDGLGG--MY--SNLKGAVLEPEDAAEAA  221 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~-----~~~~~~~~~~~--~~--~~~~~~~~~~~~~a~~~  221 (257)
                      |+.+|.+.+.+++.++.++   |++++.++|+.+.++....     ...........  ..  ......++.++|+|+++
T Consensus       138 Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  214 (313)
T 3ehe_A          138 YGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAM  214 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHH
Confidence            9999999999999999885   8999999999998874321     11110000000  11  12234578899999999


Q ss_pred             HHhcCCCCCcccccEEEecCceeeee
Q 044485          222 LYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       222 ~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      ++++.+.   ..|+.+++.+|..++-
T Consensus       215 ~~~~~~~---~~~~~~ni~~~~~~s~  237 (313)
T 3ehe_A          215 LFGLRGD---ERVNIFNIGSEDQIKV  237 (313)
T ss_dssp             HHHTTCC---SSEEEEECCCSCCEEH
T ss_pred             HHHhccC---CCCceEEECCCCCeeH
Confidence            9999733   4688999999876553

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.85  E-value=2.5e-21  Score=155.78  Aligned_cols=198  Identities=11%  Similarity=-0.049  Sum_probs=140.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +++|||||+|+||++++++|+++|++|++++|+.+..+...          ..+.++.+|++|+++++++++       +
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~Dl~d~~~~~~~~~-------~   67 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN----------EHLKVKKADVSSLDEVCEVCK-------G   67 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC----------TTEEEECCCTTCHHHHHHHHT-------T
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc----------CceEEEEecCCCHHHHHHHhc-------C
Confidence            68999999999999999999999999999999976543221          238899999999999988776       5


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhc-cccC----------CCCchh
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCG-IIGG----------AATHAY  151 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~-~~~~----------~~~~~y  151 (257)
                      +|+||||||....            ....+++|+.++..+...+.          |..+ ..+.          .+...|
T Consensus        68 ~d~vi~~a~~~~~------------~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y  135 (227)
T 3dhn_A           68 ADAVISAFNPGWN------------NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENIL  135 (227)
T ss_dssp             CSEEEECCCC------------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGH
T ss_pred             CCEEEEeCcCCCC------------ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHH
Confidence            9999999986421            11267788888888766552          1111 1111          224679


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      +.+|.+.+.+.+.++++   .|++++.++||.+.++............ ..........+++++|+|+++++++.+..  
T Consensus       136 ~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~ai~~~l~~~~--  209 (227)
T 3dhn_A          136 PGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGVRTGRYRLGKD-DMIVDIVGNSHISVEDYAAAMIDELEHPK--  209 (227)
T ss_dssp             HHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCCCCCCCEEESS-BCCCCTTSCCEEEHHHHHHHHHHHHHSCC--
T ss_pred             HHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCccccceeecCC-CcccCCCCCcEEeHHHHHHHHHHHHhCcc--
Confidence            99999999998887763   5899999999999876532111000000 00001111346789999999999997654  


Q ss_pred             ccccEEEecCceee
Q 044485          232 VSGHNLVVDGGFAI  245 (257)
Q Consensus       232 ~~G~~~~~dgG~~~  245 (257)
                      ..|+.+.+.+....
T Consensus       210 ~~g~~~~~~~~~~~  223 (227)
T 3dhn_A          210 HHQERFTIGYLEHH  223 (227)
T ss_dssp             CCSEEEEEECCSCC
T ss_pred             ccCcEEEEEeehhc
Confidence            68999988876543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.85  E-value=1.2e-20  Score=163.41  Aligned_cols=209  Identities=16%  Similarity=0.091  Sum_probs=148.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ..|++|||||+|+||++++++|+++|++|++++|+........         ..++.++.+|++|+++++++++      
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~v~~~~~Dl~d~~~~~~~~~------   92 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED---------MFCDEFHLVDLRVMENCLKVTE------   92 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG---------GTCSEEEECCTTSHHHHHHHHT------
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc---------cCCceEEECCCCCHHHHHHHhC------
Confidence            5689999999999999999999999999999999875432211         0137889999999999888764      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccc-----------------
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGII-----------------  143 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~-----------------  143 (257)
                       ++|+|||||+....  ..+   +.+++...+++|+.++.++...+.          |..+..                 
T Consensus        93 -~~d~Vih~A~~~~~--~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~  166 (379)
T 2c5a_A           93 -GVDHVFNLAADMGG--MGF---IQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESD  166 (379)
T ss_dssp             -TCSEEEECCCCCCC--HHH---HTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGG
T ss_pred             -CCCEEEECceecCc--ccc---cccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCccc
Confidence             69999999996532  111   123467888999999998866552          222221                 


Q ss_pred             --cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh----------Hhhhh-hccc-cCcc--ccc
Q 044485          144 --GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD----------FLKLA-DDGL-GGMY--SNL  207 (257)
Q Consensus       144 --~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~----------~~~~~-~~~~-~~~~--~~~  207 (257)
                        +......|+.+|.+.+.+++.++.++   |+++++++||.+.++....          +.... .... -...  ...
T Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  243 (379)
T 2c5a_A          167 AWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQ  243 (379)
T ss_dssp             GSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCC
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCe
Confidence              12234689999999999999998775   8999999999998875321          11111 0000 0001  112


Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeee
Q 044485          208 KGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       208 ~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      ...++.++|+|+++++++...    .|+.+++.+|..++.
T Consensus       244 ~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~s~  279 (379)
T 2c5a_A          244 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSM  279 (379)
T ss_dssp             EECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEEH
T ss_pred             eEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCccCH
Confidence            335788999999999998754    477899998876553

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.85  E-value=1.1e-20  Score=161.47  Aligned_cols=220  Identities=11%  Similarity=0.090  Sum_probs=148.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh------hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL------GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      +|++|||||+|+||++++++|+++|++|++++|+...      ..+..+++....  ..++.++.+|++|++++++++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFKK   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc--CCceEEEECCCCCHHHHHHHHHh
Confidence            4799999999999999999999999999999886432      222222222110  12378899999999999888765


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC----------
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG----------  145 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~----------  145 (257)
                      .     ++|+||||||....  .    .+.+++...+++|+.++.++...+.          |..+..+.          
T Consensus        80 ~-----~~d~vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~  148 (348)
T 1ek6_A           80 Y-----SFMAVIHFAGLKAV--G----ESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAH  148 (348)
T ss_dssp             C-----CEEEEEECCSCCCH--H----HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             c-----CCCEEEECCCCcCc--c----chhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCC
Confidence            2     69999999996532  0    1345677899999999999876551          22222221          


Q ss_pred             ---CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChh----------------hHhHhhhhhccccCc--c
Q 044485          146 ---AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPL----------------AKDFLKLADDGLGGM--Y  204 (257)
Q Consensus       146 ---~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~----------------~~~~~~~~~~~~~~~--~  204 (257)
                         +....|+.+|.+.+.+++.++.+  ..+++++.++|+.+..+.                ...+...........  .
T Consensus       149 ~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (348)
T 1ek6_A          149 PTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVF  226 (348)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEE
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEe
Confidence               12568999999999999999887  346999999998776542                111111100000000  0


Q ss_pred             --------ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          205 --------SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       205 --------~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                              ......++.++|+|++++.++........++.+++.+|..++
T Consensus       227 g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s  276 (348)
T 1ek6_A          227 GNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYS  276 (348)
T ss_dssp             CSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEE
T ss_pred             CCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCcc
Confidence                    111234678999999999888653212234899998876554

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.85  E-value=2.3e-21  Score=170.35  Aligned_cols=214  Identities=13%  Similarity=0.050  Sum_probs=146.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch---hhHhHHHHhccCCC------CCCCceeEecCCCCHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD---LGESVCKDIGSSSS------SASGCSYVHCDVTKEKDI   79 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~---~~~~~~~~~~~~~~------~~~~v~~~~~D~~~~~~v   79 (257)
                      ...+|+||||||+|+||++++++|++.|++|++++|+.+   ..+++.+.+....+      ...++.++.+|++|++++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            456789999999999999999999999999999999876   33333332221100      012488999999998887


Q ss_pred             HHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhcccc------
Q 044485           80 ENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGIIG------  144 (257)
Q Consensus        80 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~~------  144 (257)
                      .        ..+++|+|||||+....         .+++...+++|+.++..+.+.+.         |..+. +      
T Consensus       146 ~--------~~~~~d~Vih~A~~~~~---------~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~  207 (427)
T 4f6c_A          146 V--------LPENMDTIIHAGARTDH---------FGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDID  207 (427)
T ss_dssp             C--------CSSCCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSS
T ss_pred             C--------CcCCCCEEEECCcccCC---------CCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCC
Confidence            7        44689999999997532         24577889999999999876652         22222 1      


Q ss_pred             --------------CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH----------hhhhhccc
Q 044485          145 --------------GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF----------LKLADDGL  200 (257)
Q Consensus       145 --------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~----------~~~~~~~~  200 (257)
                                    ......|+.+|.+.+.+++.++.    +|+++++++||.+.++.....          ........
T Consensus       208 ~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~  283 (427)
T 4f6c_A          208 TEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLL  283 (427)
T ss_dssp             CSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHH
T ss_pred             CCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHH
Confidence                          12456899999999999998753    589999999999977643221          01000000


Q ss_pred             -cCcc----ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeee
Q 044485          201 -GGMY----SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       201 -~~~~----~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                       ....    ......++.++|+|+++++++....   .|+++++++|..++-
T Consensus       284 ~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~s~  332 (427)
T 4f6c_A          284 QLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMPV  332 (427)
T ss_dssp             HSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCEEH
T ss_pred             hcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCCcH
Confidence             0001    1223347889999999999987654   899999999876653

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.85  E-value=1.9e-21  Score=199.36  Aligned_cols=164  Identities=15%  Similarity=0.149  Sum_probs=124.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhH---hHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGE---SVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~---~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .+|++|||||++|||+++|++|+++|++ |++++|+....+   +..+++...   +.++.++.||++|+++++++++++
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~---g~~v~~~~~Dvsd~~~v~~~~~~~ 1959 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ---GVQVLVSTSNASSLDGARSLITEA 1959 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT---TCEEEEECCCSSSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC---CCEEEEEecCCCCHHHHHHHHHHH
Confidence            6899999999999999999999999997 888999865543   344444332   235889999999999999999998


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-------------HhhhccccCCCCchhhh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-------------LGVCGIIGGAATHAYTS  153 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-------------~s~~~~~~~~~~~~y~~  153 (257)
                      . .+++||+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+             +|..+..+.++...|++
T Consensus      1960 ~-~~g~id~lVnnAgv~~~--~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~a 2036 (2512)
T 2vz8_A         1960 T-QLGPVGGVFNLAMVLRD--AVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGF 2036 (2512)
T ss_dssp             H-HHSCEEEEEECCCC------------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHH
T ss_pred             H-hcCCCcEEEECCCcCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHH
Confidence            7 47999999999998754  67889999999999999999999985544             46667778888999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAV  184 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v  184 (257)
                      +|+++++|+|.++.+    |++..++..|.+
T Consensus      2037 aKaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2037 ANSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence            999999999987755    777777777655

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.84  E-value=7e-20  Score=159.47  Aligned_cols=218  Identities=16%  Similarity=0.056  Sum_probs=146.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhH----------------hHHHHhccCCCCCCCceeEecC
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGE----------------SVCKDIGSSSSSASGCSYVHCD   72 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~----------------~~~~~~~~~~~~~~~v~~~~~D   72 (257)
                      ..++++||||||+|.||++++++|+++|++|++++|......                +..++.....  ..++.++.+|
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~v~~~~~D   85 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT--GKSIELYVGD   85 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH--CCCCEEEESC
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc--CCceEEEECC
Confidence            456789999999999999999999999999999988643211                0111110000  1237889999


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhc
Q 044485           73 VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCG  141 (257)
Q Consensus        73 ~~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~  141 (257)
                      ++|+++++++++..     ++|+||||||....   .....+.+++...+++|+.++..+...+.           |..+
T Consensus        86 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~~---~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~  157 (404)
T 1i24_A           86 ICDFEFLAESFKSF-----EPDSVVHFGEQRSA---PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMG  157 (404)
T ss_dssp             TTSHHHHHHHHHHH-----CCSEEEECCSCCCH---HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGG
T ss_pred             CCCHHHHHHHHhcc-----CCCEEEECCCCCCc---cchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHH
Confidence            99999998888754     59999999996532   11122566677899999999998865542           1122


Q ss_pred             cc-------------------------cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh-----
Q 044485          142 II-------------------------GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD-----  191 (257)
Q Consensus       142 ~~-------------------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~-----  191 (257)
                      ..                         +..+...|+.+|.+.+.+++.++.++   |+++++++||.+.+|....     
T Consensus       158 vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~~~~  234 (404)
T 1i24_A          158 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEMHE  234 (404)
T ss_dssp             GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGGSG
T ss_pred             HhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCcccccc
Confidence            22                         12234579999999999999998876   8999999999998875311     


Q ss_pred             ------------------HhhhhhccccC-ccc--cccCCCCCHHHHHHHHHHhcCCCCCcccc--cEEEecC
Q 044485          192 ------------------FLKLADDGLGG-MYS--NLKGAVLEPEDAAEAALYLGSDESKCVSG--HNLVVDG  241 (257)
Q Consensus       192 ------------------~~~~~~~~~~~-~~~--~~~~~~~~~~~~a~~~~~l~s~~~~~~~G--~~~~~dg  241 (257)
                                        +.......... ...  .....++.++|+|++++.++....  ..|  +.+++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~~  305 (404)
T 1i24_A          235 ELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQFT  305 (404)
T ss_dssp             GGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEECS
T ss_pred             ccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEECC
Confidence                              10000000000 011  112346789999999998886532  246  6888866

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.84  E-value=1.7e-20  Score=162.17  Aligned_cols=211  Identities=12%  Similarity=0.049  Sum_probs=150.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcC-CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+.+|++|||||+|+||++++++|+++| ++|++++|+.+...+   .+..    ..++.++.+|++|+++++++++   
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~~----~~~v~~~~~Dl~d~~~l~~~~~---   98 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVPD----HPAVRFSETSITDDALLASLQD---   98 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSCC----CTTEEEECSCTTCHHHHHHCCS---
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hccC----CCceEEEECCCCCHHHHHHHhh---
Confidence            5778999999999999999999999999 999999998654321   1110    1248889999999988777654   


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh-----------hccc-------------
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV-----------CGII-------------  143 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~-----------~~~~-------------  143 (257)
                          ++|+|||||+....      ..+.+++...+++|+.++..+...+...           .+..             
T Consensus        99 ----~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~  168 (377)
T 2q1s_A           99 ----EYDYVFHLATYHGN------QSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEE  168 (377)
T ss_dssp             ----CCSEEEECCCCSCH------HHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CC
T ss_pred             ----CCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccc
Confidence                79999999996432      1234567889999999999886655211           1111             


Q ss_pred             ----cC-CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhh---------Hh------Hhh-hhh---cc
Q 044485          144 ----GG-AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA---------KD------FLK-LAD---DG  199 (257)
Q Consensus       144 ----~~-~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~---------~~------~~~-~~~---~~  199 (257)
                          +. .+...|+.+|.+.+.+++.++.++   |++++.++||.+.++..         ..      ... ...   ..
T Consensus       169 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g  245 (377)
T 2q1s_A          169 TDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKG  245 (377)
T ss_dssp             CCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTT
T ss_pred             cccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcC
Confidence                11 335689999999999999998775   89999999999987754         11      110 000   00


Q ss_pred             cc-Ccc--ccccCCCCCHHHHHHH-HHHhcCCCCCcccccEEEecCceeee
Q 044485          200 LG-GMY--SNLKGAVLEPEDAAEA-ALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       200 ~~-~~~--~~~~~~~~~~~~~a~~-~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .. ...  ......++.++|+|++ +++++....   +| .+++.+|..++
T Consensus       246 ~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~~s  292 (377)
T 2q1s_A          246 MPLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKETS  292 (377)
T ss_dssp             CCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCCEE
T ss_pred             CCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCcee
Confidence            00 001  1122356789999999 998887643   68 99999986654

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.84  E-value=3.6e-20  Score=157.57  Aligned_cols=210  Identities=16%  Similarity=0.164  Sum_probs=146.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHc---C---CeEEEeeCcchh-hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485           14 VALITGGARGIGECTARLFSKH---G---AKVLIADIKDDL-GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~---g---~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ++|||||+|+||++++++|+++   |   ++|++++|+... ..+..+.+..    ..++.++.+|++|++++++++   
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~---   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDA----DPRLRFVHGDIRDAGLLAREL---   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTT----CTTEEEEECCTTCHHHHHHHT---
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhccc----CCCeEEEEcCCCCHHHHHHHh---
Confidence            6999999999999999999997   8   999999986521 1111122211    124889999999999887776   


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccc------------c
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGII------------G  144 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~------------~  144 (257)
                          .++|+|||||+....      +.+.+++...+++|+.++..+.+.+.          |..+..            +
T Consensus        75 ----~~~d~Vih~A~~~~~------~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~  144 (337)
T 1r6d_A           75 ----RGVDAIVHFAAESHV------DRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSP  144 (337)
T ss_dssp             ----TTCCEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSC
T ss_pred             ----cCCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCC
Confidence                379999999996431      12334567889999999999876652          221211            2


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh------Hhhhhhccc-cCcc--ccccCCCCCHH
Q 044485          145 GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD------FLKLADDGL-GGMY--SNLKGAVLEPE  215 (257)
Q Consensus       145 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~------~~~~~~~~~-~~~~--~~~~~~~~~~~  215 (257)
                      ..+...|+.+|.+.+.+++.++.++   |++++.++|+.+.++....      ......... ....  ......++.++
T Consensus       145 ~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  221 (337)
T 1r6d_A          145 LEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTD  221 (337)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHH
Confidence            2335689999999999999998875   7999999999998875321      111000000 0000  11123467899


Q ss_pred             HHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          216 DAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       216 ~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      |+|+++++++.+.   .+|+.+++++|..++
T Consensus       222 Dva~a~~~~~~~~---~~g~~~~v~~~~~~s  249 (337)
T 1r6d_A          222 DHCRGIALVLAGG---RAGEIYHIGGGLELT  249 (337)
T ss_dssp             HHHHHHHHHHHHC---CTTCEEEECCCCEEE
T ss_pred             HHHHHHHHHHhCC---CCCCEEEeCCCCCcc
Confidence            9999999988653   378999999987654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.84  E-value=6.6e-20  Score=155.57  Aligned_cols=234  Identities=11%  Similarity=-0.002  Sum_probs=150.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHH-HcCCeEEEeeCcchhh------------HhHHHHhccCCCCCCCceeEecCCCC
Q 044485            9 RLQGKVALITGGARGIGECTARLFS-KHGAKVLIADIKDDLG------------ESVCKDIGSSSSSASGCSYVHCDVTK   75 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~-~~g~~Vi~~~r~~~~~------------~~~~~~~~~~~~~~~~v~~~~~D~~~   75 (257)
                      ...+|++||||||+|||++++..|+ +.|++|+++++..+..            ..+.+++++.+   .+...+.||++|
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G---~~a~~i~~Dv~d  123 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREG---LYSVTIDGDAFS  123 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHT---CCEEEEESCTTS
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcC---CCceeEeCCCCC
Confidence            4568999999999999999999999 6899999998865432            23344554444   348899999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCCCCCCCC-----------C---------------------CCCCCCHHHHHHHHh
Q 044485           76 EKDIENAVNTAVTQYGKLDIMFNNAGTVDEVK-----------P---------------------NILDNDQAEFERILS  123 (257)
Q Consensus        76 ~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~-----------~---------------------~~~~~~~~~~~~~~~  123 (257)
                      .++++++++++.+.+|+||+||||++......           +                     .+...+.++++....
T Consensus       124 ~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~  203 (401)
T 4ggo_A          124 DEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVK  203 (401)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHH
Confidence            99999999999999999999999999752100           0                     012345666666655


Q ss_pred             hhchhhh---HHHHHHHh-------hhc--c------ccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCcc
Q 044485          124 INLVGAF---LGRNMLLG-------VCG--I------IGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVS  185 (257)
Q Consensus       124 ~n~~~~~---~l~~~~~s-------~~~--~------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~  185 (257)
                      +.-.+.+   ........       +..  .      .|......++++|++|++.+|.|+.++++  ++++.+.||.+.
T Consensus       204 vMg~s~~s~w~~al~~a~lla~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~v  281 (401)
T 4ggo_A          204 VMGGEDWERWIKQLSKEGLLEEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGLV  281 (401)
T ss_dssp             HHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCCC
T ss_pred             HHhhhHHHHHHHHHHhhhcccCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCccc
Confidence            5544444   33222211       111  1      12222336789999999999999999975  899999999999


Q ss_pred             ChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeeecce
Q 044485          186 TPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGF  250 (257)
Q Consensus       186 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~~~~  250 (257)
                      |.-...+.. .+......++. .+..+.-|.+.+.+.+|..+.- |-++....+|+.-.+...+|
T Consensus       282 T~AssaIP~-~ply~~~l~kv-mk~~g~heg~ieq~~rl~~~~l-y~~~~~~~~D~~~r~r~d~~  343 (401)
T 4ggo_A          282 TRASAVIPV-IPLYLASLFKV-MKEKGNHEGCIEQITRLYAERL-YRKDGTIPVDEENRIRIDDW  343 (401)
T ss_dssp             CTTGGGSSS-HHHHHHHHHHH-HHHHTCCCCHHHHHHHHHHHTT-SCTTCCCCCCTTSCEESCTT
T ss_pred             cchhhcCCC-chHHHHHHHHH-HHhcCCCCchHHHHHHHHHHhh-ccCCCCCCcCCCCCccCchh
Confidence            965432211 00000011110 1223345666666666665431 11222345677666654443

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.83  E-value=5.3e-20  Score=156.82  Aligned_cols=210  Identities=14%  Similarity=0.121  Sum_probs=145.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCH-HHHHHHHHHHHHHc
Q 044485           13 KVALITGGARGIGECTARLFSKH-GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKE-KDIENAVNTAVTQY   90 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~~~~   90 (257)
                      |++|||||+|+||++++++|+++ |++|++++|+.+..++..+        ..++.++.+|++|. +.++++++      
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--------HPHFHFVEGDISIHSEWIEYHVK------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT--------CTTEEEEECCTTTCSHHHHHHHH------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc--------CCCeEEEeccccCcHHHHHhhcc------
Confidence            47999999999999999999998 8999999998765543211        12388999999984 55666654      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccccCC---------------
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGIIGGA---------------  146 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~~~~---------------  146 (257)
                       ++|+||||||....  .    ...+++...+++|+.++..+.....         |..+..+..               
T Consensus        67 -~~d~vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~  139 (345)
T 2bll_A           67 -KCDVVLPLVAIATP--I----EYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVG  139 (345)
T ss_dssp             -HCSEEEECBCCCCH--H----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCC
T ss_pred             -CCCEEEEcccccCc--c----chhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCCCCcCCcccccccC
Confidence             48999999996532  0    1134567788999999988766542         222222110               


Q ss_pred             ----CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH--------------hHhhh-hhccccCcc--c
Q 044485          147 ----ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK--------------DFLKL-ADDGLGGMY--S  205 (257)
Q Consensus       147 ----~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~--------------~~~~~-~~~~~~~~~--~  205 (257)
                          ....|+.+|.+.+.+++.+++++   |++++.++|+.+.++...              .+... .........  .
T Consensus       140 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  216 (345)
T 2bll_A          140 PVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGG  216 (345)
T ss_dssp             CTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGS
T ss_pred             cccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCC
Confidence                11279999999999999998775   899999999999776531              11110 000000001  1


Q ss_pred             cccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCce-eee
Q 044485          206 NLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGF-AIV  246 (257)
Q Consensus       206 ~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~-~~~  246 (257)
                      .....++.++|+|+++++++........|+.+++.+|. .++
T Consensus       217 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s  258 (345)
T 2bll_A          217 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEAS  258 (345)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEE
T ss_pred             CEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCC
Confidence            12234789999999999998765444679999999984 444

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.83  E-value=2.7e-20  Score=149.29  Aligned_cols=188  Identities=11%  Similarity=0.003  Sum_probs=127.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      ++|||||+|+||++++++|+++|++|++++|+.+.+++...         ..+.++.+|++|+++         +.++++
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---------~~~~~~~~D~~d~~~---------~~~~~~   63 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG---------ATVATLVKEPLVLTE---------ADLDSV   63 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC---------TTSEEEECCGGGCCH---------HHHTTC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccC---------CCceEEecccccccH---------hhcccC
Confidence            59999999999999999999999999999999876554321         138899999999987         223579


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------HhhhccccCCC--------------Cc
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGIIGGAA--------------TH  149 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~~~~~--------------~~  149 (257)
                      |+||||||....  ..           ...+|+.++..+...+          +|..+..+.+.              ..
T Consensus        64 d~vi~~ag~~~~--~~-----------~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
T 3h2s_A           64 DAVVDALSVPWG--SG-----------RGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILDFPESAASQP  130 (224)
T ss_dssp             SEEEECCCCCTT--SS-----------CTHHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSSCGGGGCCGGGGGST
T ss_pred             CEEEECCccCCC--cc-----------hhhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCccccccCCCCCccch
Confidence            999999997521  11           1234555655554333          22223222222              56


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      .|+.+|.+.+.+ +.   .....|++++.++||++.++.......   ...... .......+++++|+|+++++++...
T Consensus       131 ~y~~sK~~~e~~-~~---~~~~~~i~~~ivrp~~v~g~~~~~~~~---~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~  203 (224)
T 3h2s_A          131 WYDGALYQYYEY-QF---LQMNANVNWIGISPSEAFPSGPATSYV---AGKDTLLVGEDGQSHITTGNMALAILDQLEHP  203 (224)
T ss_dssp             THHHHHHHHHHH-HH---HTTCTTSCEEEEEECSBCCCCCCCCEE---EESSBCCCCTTSCCBCCHHHHHHHHHHHHHSC
T ss_pred             hhHHHHHHHHHH-HH---HHhcCCCcEEEEcCccccCCCcccCce---ecccccccCCCCCceEeHHHHHHHHHHHhcCc
Confidence            799999999854 22   224579999999999999873221100   000000 1122245789999999999999765


Q ss_pred             CCcccccEEEecC
Q 044485          229 SKCVSGHNLVVDG  241 (257)
Q Consensus       229 ~~~~~G~~~~~dg  241 (257)
                      .  ..|+.+.+.|
T Consensus       204 ~--~~g~~~~~~~  214 (224)
T 3h2s_A          204 T--AIRDRIVVRD  214 (224)
T ss_dssp             C--CTTSEEEEEE
T ss_pred             c--ccCCEEEEec
Confidence            4  5688887754

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.83  E-value=2.3e-20  Score=157.38  Aligned_cols=204  Identities=9%  Similarity=0.044  Sum_probs=115.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||+|+||++++++|+++|++|++++|+.+.           .    .  ++.+|++|++++.++++..     
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~----~--~~~~Dl~d~~~~~~~~~~~-----   59 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P----K--FEQVNLLDSNAVHHIIHDF-----   59 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CHHHHHHH-----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C----C--eEEecCCCHHHHHHHHHhh-----
Confidence            5799999999999999999999999999999987543           0    1  4678999999988888754     


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhcccc-----------CCCCchh
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGIIG-----------GAATHAY  151 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~~-----------~~~~~~y  151 (257)
                      ++|+||||||....      ..+.+++...+++|+.++..+.+.+.         |..+..+           ..+...|
T Consensus        60 ~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y  133 (315)
T 2ydy_A           60 QPHVIVHCAAERRP------DVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNPPYREEDIPAPLNLY  133 (315)
T ss_dssp             CCSEEEECC-------------------------CHHHHHHHHHHHHHTCEEEEEEEGGGSCSSSCSBCTTSCCCCCSHH
T ss_pred             CCCEEEECCcccCh------hhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCCCCCCCCCCCCCCCcCHH
Confidence            69999999996532      22456778899999999999876652         1222221           2335689


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccCh---hhHhHhhhhh-cccc-CccccccCCCCCHHHHHHHHHHhcC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTP---LAKDFLKLAD-DGLG-GMYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~---~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      +.+|.+.+.+++.++.++  ..+|.+.|. |+..++   +......... .... .........++.++|+|+++++++.
T Consensus       134 ~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~  210 (315)
T 2ydy_A          134 GKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAE  210 (315)
T ss_dssp             HHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHH
Confidence            999999999999875433  235555555 544441   1111111111 0000 0112334567899999999999986


Q ss_pred             CC-CCcccccEEEecCceeee
Q 044485          227 DE-SKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       227 ~~-~~~~~G~~~~~dgG~~~~  246 (257)
                      +. .....|+.+++.+|..++
T Consensus       211 ~~~~~~~~~~~~~i~~~~~~s  231 (315)
T 2ydy_A          211 KRMLDPSIKGTFHWSGNEQMT  231 (315)
T ss_dssp             HHHTCTTCCEEEECCCSCCBC
T ss_pred             hhccccCCCCeEEEcCCCccc
Confidence            53 122468899999987654

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.83  E-value=3.4e-21  Score=156.14  Aligned_cols=191  Identities=14%  Similarity=0.102  Sum_probs=119.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcC-CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..|++|||||+|+||++++++|+++| ++|++++|+.+.+++..         ...+.++.+|++|+++++++++     
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-----   87 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY---------PTNSQIIMGDVLNHAALKQAMQ-----   87 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC---------CTTEEEEECCTTCHHHHHHHHT-----
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc---------cCCcEEEEecCCCHHHHHHHhc-----
Confidence            34899999999999999999999999 89999999987654321         1238899999999999988876     


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhh-chhhhHHH--HHH---HhhhccccCCCCc---------hhhhh
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN-LVGAFLGR--NML---LGVCGIIGGAATH---------AYTSS  154 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n-~~~~~~l~--~~~---~s~~~~~~~~~~~---------~y~~s  154 (257)
                        .+|+||||++....             ..  .++ +.....-.  ..+   ++.....+.+...         .+...
T Consensus        88 --~~D~vv~~a~~~~~-------------~~--~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~  150 (236)
T 3qvo_A           88 --GQDIVYANLTGEDL-------------DI--QANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKP  150 (236)
T ss_dssp             --TCSEEEEECCSTTH-------------HH--HHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHH
T ss_pred             --CCCEEEEcCCCCch-------------hH--HHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHH
Confidence              68999999985210             00  011 10000000  001   1111111111110         11112


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      +...       ...+.+.||++++|+||++.++........      .......+++++++|+|+++++++++...++ |
T Consensus       151 ~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~~~~------~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~-g  216 (236)
T 3qvo_A          151 FRRA-------ADAIEASGLEYTILRPAWLTDEDIIDYELT------SRNEPFKGTIVSRKSVAALITDIIDKPEKHI-G  216 (236)
T ss_dssp             HHHH-------HHHHHTSCSEEEEEEECEEECCSCCCCEEE------CTTSCCSCSEEEHHHHHHHHHHHHHSTTTTT-T
T ss_pred             HHHH-------HHHHHHCCCCEEEEeCCcccCCCCcceEEe------ccCCCCCCcEECHHHHHHHHHHHHcCccccc-C
Confidence            2221       223346899999999999988643221000      0001122457899999999999999876555 8


Q ss_pred             cEEEecCceeee
Q 044485          235 HNLVVDGGFAIV  246 (257)
Q Consensus       235 ~~~~~dgG~~~~  246 (257)
                      +.+.++++.+..
T Consensus       217 ~~~~i~~~~~~~  228 (236)
T 3qvo_A          217 ENIGINQPGTDG  228 (236)
T ss_dssp             EEEEEECSSCCC
T ss_pred             eeEEecCCCCCC
Confidence            999999987654

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.83  E-value=1.9e-20  Score=160.63  Aligned_cols=211  Identities=15%  Similarity=0.202  Sum_probs=143.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcC-CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++.+|++|||||+|+||++++++|+++| ++|++++|+.....  .+.+.       .+. +.+|++|+++++.+++.  
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~-------~~~-~~~d~~~~~~~~~~~~~--  110 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV-------DLN-IADYMDKEDFLIQIMAG--  110 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT-------TSC-CSEEEEHHHHHHHHHTT--
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc-------Cce-EeeecCcHHHHHHHHhh--
Confidence            4678999999999999999999999999 89999998765421  11111       123 67899999888877653  


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccccCC------------
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGIIGGA------------  146 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~~~~------------  146 (257)
                      ..++++|+|||||+....        +.+++...+++|+.++..+...+.         |..+..+..            
T Consensus       111 ~~~~~~d~Vih~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~~~~~~~~E~~~~~  182 (357)
T 2x6t_A          111 EEFGDVEAIFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEK  182 (357)
T ss_dssp             CCCSSCCEEEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCSCSSCCCSSGGGCC
T ss_pred             cccCCCCEEEECCcccCC--------ccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCCCCCCCcCCcCCCC
Confidence            124579999999996532        123467888999999998866552         222222211            


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH------h----Hhhhhhcccc-Ccc--ccc-cCCCC
Q 044485          147 ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK------D----FLKLADDGLG-GMY--SNL-KGAVL  212 (257)
Q Consensus       147 ~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~------~----~~~~~~~~~~-~~~--~~~-~~~~~  212 (257)
                      +...|+.+|.+.+.+++.++.+   .|++++.++|+.+.++...      .    +......... ...  ... ...++
T Consensus       183 p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  259 (357)
T 2x6t_A          183 PLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV  259 (357)
T ss_dssp             CSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccE
Confidence            2458999999999999998876   4899999999999876432      1    1110000000 011  112 34578


Q ss_pred             CHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          213 EPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       213 ~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .++|+|+++++++....    |+.+++.+|..++
T Consensus       260 ~v~Dva~ai~~~~~~~~----~~~~~i~~~~~~s  289 (357)
T 2x6t_A          260 YVGDVADVNLWFLENGV----SGIFNLGTGRAES  289 (357)
T ss_dssp             EHHHHHHHHHHHHHHCC----CEEEEESCSCCEE
T ss_pred             EHHHHHHHHHHHHhcCC----CCeEEecCCCccc
Confidence            99999999999987643    8899999887654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.82  E-value=5.7e-20  Score=151.54  Aligned_cols=181  Identities=18%  Similarity=0.165  Sum_probs=133.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |++|||||+|+||++++++|+++|++|++++|+.....      .      ..+.++.+|++|++++.++++       +
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~------~~~~~~~~Dl~d~~~~~~~~~-------~   63 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA------E------AHEEIVACDLADAQAVHDLVK-------D   63 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC------C------TTEEECCCCTTCHHHHHHHHT-------T
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc------C------CCccEEEccCCCHHHHHHHHc-------C
Confidence            68999999999999999999999999999999875321      0      127889999999998888775       5


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC-C------------CCc
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG-A------------ATH  149 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~-~------------~~~  149 (257)
                      +|+||||||....          +++.+.+++|+.++..+.+.+.          |.....+. +            +..
T Consensus        64 ~d~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~  133 (267)
T 3ay3_A           64 CDGIIHLGGVSVE----------RPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDS  133 (267)
T ss_dssp             CSEEEECCSCCSC----------CCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCS
T ss_pred             CCEEEECCcCCCC----------CCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCC
Confidence            9999999996521          2357889999999998876652          11111111 1            246


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCc-cChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAV-STPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      .|+.+|.+.+.+++.++.   ++|++++.++||.+ .++....               ....+++++|+|+.++.++...
T Consensus       134 ~Y~~sK~~~e~~~~~~~~---~~gi~~~~lrp~~v~~~~~~~~---------------~~~~~~~~~dva~~~~~~~~~~  195 (267)
T 3ay3_A          134 LYGLSKCFGEDLASLYYH---KFDIETLNIRIGSCFPKPKDAR---------------MMATWLSVDDFMRLMKRAFVAP  195 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHH---TTCCCEEEEEECBCSSSCCSHH---------------HHHHBCCHHHHHHHHHHHHHSS
T ss_pred             hHHHHHHHHHHHHHHHHH---HcCCCEEEEeceeecCCCCCCC---------------eeeccccHHHHHHHHHHHHhCC
Confidence            899999999999998865   36899999999997 4432111               0123678999999999988654


Q ss_pred             CCcccccEEEecCc
Q 044485          229 SKCVSGHNLVVDGG  242 (257)
Q Consensus       229 ~~~~~G~~~~~dgG  242 (257)
                      .  ..+..+.+.++
T Consensus       196 ~--~~~~~~~~~~~  207 (267)
T 3ay3_A          196 K--LGCTVVYGASA  207 (267)
T ss_dssp             C--CCEEEEEECCS
T ss_pred             C--CCceeEecCCC
Confidence            2  22344554443

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.82  E-value=9.3e-20  Score=154.51  Aligned_cols=211  Identities=15%  Similarity=0.166  Sum_probs=146.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |++|||||+|+||++++++|+++|++|++++|+.....   +.+.      .++.++.+|++|++++++++++     .+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~------~~~~~~~~D~~~~~~~~~~~~~-----~~   67 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAIT------EGAKFYNGDLRDKAFLRDVFTQ-----EN   67 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGSC------TTSEEEECCTTCHHHHHHHHHH-----SC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhcC------CCcEEEECCCCCHHHHHHHHhh-----cC
Confidence            58999999999999999999999999999998764432   1121      1378899999999998888765     37


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC------------CCCch
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG------------AATHA  150 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~------------~~~~~  150 (257)
                      +|+|||+|+....      ..+.+++...+++|+.++..+...+.          |..+..+.            .+...
T Consensus        68 ~d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~  141 (330)
T 2c20_A           68 IEAVMHFAADSLV------GVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNT  141 (330)
T ss_dssp             EEEEEECCCCCCH------HHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred             CCEEEECCcccCc------cccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence            9999999996532      11345678899999999998866552          22222221            23468


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhh-----------HhH----hhhhhccccCc--c--------c
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA-----------KDF----LKLADDGLGGM--Y--------S  205 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~-----------~~~----~~~~~~~~~~~--~--------~  205 (257)
                      |+.+|.+.+.+++.++.++   |++++.++|+.+.++..           ...    ...........  .        .
T Consensus       142 Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  218 (330)
T 2c20_A          142 YGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDG  218 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCC
Confidence            9999999999999988764   89999999988876631           011    11000000000  0        0


Q ss_pred             cccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          206 NLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       206 ~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .....++.++|+|++++.++......-.|+.+++.+|..++
T Consensus       219 ~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s  259 (330)
T 2c20_A          219 TCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFS  259 (330)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBC
T ss_pred             ceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCcc
Confidence            11124678999999999887643221246888888776543

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.82  E-value=4.2e-20  Score=157.20  Aligned_cols=211  Identities=17%  Similarity=0.126  Sum_probs=136.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +++|++|||||+|+||++++++|+++|++|+++.|+.+..++...... ......++.++.+|++|+++++++++     
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLD-LPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHT-STTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHh-cccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            357899999999999999999999999999999998764433322111 11000137789999999998887764     


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH------------hhhccccCC-----------
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL------------GVCGIIGGA-----------  146 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~------------s~~~~~~~~-----------  146 (257)
                        .+|+|||+|+...     +...+  .....+++|+.++.++.+...            |..+..+.+           
T Consensus        77 --~~d~Vih~A~~~~-----~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~  147 (337)
T 2c29_D           77 --GCTGVFHVATPMD-----FESKD--PENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCW  147 (337)
T ss_dssp             --TCSEEEECCCCCC-----SSCSS--HHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCC
T ss_pred             --CCCEEEEeccccC-----CCCCC--hHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccC
Confidence              5899999998541     11122  234688999999998865441            222122110           


Q ss_pred             -----------CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH----hhhh---hccccCcc-ccc
Q 044485          147 -----------ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF----LKLA---DDGLGGMY-SNL  207 (257)
Q Consensus       147 -----------~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~----~~~~---~~~~~~~~-~~~  207 (257)
                                 ....|+.||.+.+.+++.++++   +|+++++++|+.+.+|.....    ....   ........ ...
T Consensus       148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~  224 (337)
T 2c29_D          148 SDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIR  224 (337)
T ss_dssp             CCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHT
T ss_pred             CchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccC
Confidence                       1236999999999998877654   489999999999988753211    0000   00000001 111


Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCcccccEEEecC
Q 044485          208 KGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDG  241 (257)
Q Consensus       208 ~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dg  241 (257)
                      ..+++.++|+|+++++++....  ..|.. .+.+
T Consensus       225 ~~~~i~v~Dva~a~~~~~~~~~--~~~~~-~~~~  255 (337)
T 2c29_D          225 QGQFVHLDDLCNAHIYLFENPK--AEGRY-ICSS  255 (337)
T ss_dssp             EEEEEEHHHHHHHHHHHHHCTT--CCEEE-EECC
T ss_pred             CCCEEEHHHHHHHHHHHhcCcc--cCceE-EEeC
Confidence            2347899999999999886532  35544 4433

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.82  E-value=1e-18  Score=150.53  Aligned_cols=216  Identities=13%  Similarity=0.087  Sum_probs=137.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhH-hHHHHhcc-CCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGE-SVCKDIGS-SSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~-~~~~~~~~-~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      |++|||||+|+||++++++|+++|++|++++|+.+... +..+.+.. ......++.++.+|++|+++++++++..    
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc----
Confidence            78999999999999999999999999999999865321 11111111 0000124788999999999999888765    


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhcccc------------C
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCGIIG------------G  145 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~~~~------------~  145 (257)
                       ++|+||||||....      ..+.+++...+++|+.++..+.+.+..             ..+..+            .
T Consensus        78 -~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~  150 (372)
T 1db3_A           78 -QPDEVYNLGAMSHV------AVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPF  150 (372)
T ss_dssp             -CCSEEEECCCCCTT------TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred             -CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCC
Confidence             69999999997532      123345678889999999988655422             111111            1


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhh---------HhHhhhhhccc-cC-cc--ccccCCCC
Q 044485          146 AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA---------KDFLKLADDGL-GG-MY--SNLKGAVL  212 (257)
Q Consensus       146 ~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~---------~~~~~~~~~~~-~~-~~--~~~~~~~~  212 (257)
                      .+...|+.+|++.+.+++.++.++   |+.+..+.|..+..|..         ........... .. ..  ......++
T Consensus       151 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i  227 (372)
T 1db3_A          151 YPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG  227 (372)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeee
Confidence            235689999999999999999875   56666666554433321         11111100000 00 01  12223578


Q ss_pred             CHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          213 EPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       213 ~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .++|+|++++.++....    ++.+++.+|..++
T Consensus       228 ~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s  257 (372)
T 1db3_A          228 HAKDYVKMQWMMLQQEQ----PEDFVIATGVQYS  257 (372)
T ss_dssp             EHHHHHHHHHHTTSSSS----CCCEEECCCCCEE
T ss_pred             EHHHHHHHHHHHHhcCC----CceEEEcCCCcee
Confidence            89999999998886542    4678887776544

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.82  E-value=1.9e-19  Score=153.37  Aligned_cols=215  Identities=17%  Similarity=0.202  Sum_probs=143.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcC-------CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHG-------AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIEN   81 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g-------~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~   81 (257)
                      .++++++|||||+|+||.+++++|+++|       ++|++++|+.+...+    .     ...++.++.+|++|++++++
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~----~-----~~~~~~~~~~Dl~d~~~~~~   81 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA----G-----FSGAVDARAADLSAPGEAEK   81 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT----T-----CCSEEEEEECCTTSTTHHHH
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc----c-----cCCceeEEEcCCCCHHHHHH
Confidence            4678999999999999999999999999       799999998654321    0     11247889999999999888


Q ss_pred             HHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------hhccccCC
Q 044485           82 AVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------VCGIIGGA  146 (257)
Q Consensus        82 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------~~~~~~~~  146 (257)
                      +++      +++|+||||||....       .+.+++...+++|+.++..+...+..               ..+..+..
T Consensus        82 ~~~------~~~d~vih~A~~~~~-------~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~  148 (342)
T 2hrz_A           82 LVE------ARPDVIFHLAAIVSG-------EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAP  148 (342)
T ss_dssp             HHH------TCCSEEEECCCCCHH-------HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSS
T ss_pred             HHh------cCCCEEEECCccCcc-------cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCC
Confidence            775      379999999996421       23467888999999999987554421               11222221


Q ss_pred             ------------CCchhhhhHHHHHHHHHHHHHHh--ccCCcEEEeec--CCCccChhhH---hHhhhhhccccC-c-c-
Q 044485          147 ------------ATHAYTSSKHGLLGLMKNTAVEL--GRFGIRVNCVS--PYAVSTPLAK---DFLKLADDGLGG-M-Y-  204 (257)
Q Consensus       147 ------------~~~~y~~sK~a~~~~~~~l~~e~--~~~gi~v~~i~--pg~v~t~~~~---~~~~~~~~~~~~-~-~-  204 (257)
                                  +...|+.+|.+.+.+++.++.++  ....+|++.+.  ||...++...   ............ . . 
T Consensus       149 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (342)
T 2hrz_A          149 LPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVP  228 (342)
T ss_dssp             CCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSC
T ss_pred             CCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCC
Confidence                        45689999999999999988764  22346777776  8876654321   111110000000 0 0 


Q ss_pred             ccccCCCCCHHHHHHHHHHhcCCCCC-cccccEEEecCceeee
Q 044485          205 SNLKGAVLEPEDAAEAALYLGSDESK-CVSGHNLVVDGGFAIV  246 (257)
Q Consensus       205 ~~~~~~~~~~~~~a~~~~~l~s~~~~-~~~G~~~~~dgG~~~~  246 (257)
                      ......++.++|+|++++.++..... ...|+.+++. |..++
T Consensus       229 ~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s  270 (342)
T 2hrz_A          229 ESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSAT  270 (342)
T ss_dssp             TTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEE
T ss_pred             CccceeeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCCC
Confidence            01111256899999999988754321 1146788884 44433

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.81  E-value=4.9e-19  Score=150.35  Aligned_cols=215  Identities=15%  Similarity=0.093  Sum_probs=144.5

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhH-hHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGE-SVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ..++++|||||+|+||++++++|+++|++|++++|+.+... ...+.+..    ..++.++.+|++|+++++++++..  
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~--   85 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI----EGDIQYEDGDMADACSVQRAVIKA--   85 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC----GGGEEEEECCTTCHHHHHHHHHHH--
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccc----cCceEEEECCCCCHHHHHHHHHHc--
Confidence            45789999999999999999999999999999999875421 11222211    123788999999999999888765  


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhccccC------------
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGIIGG------------  145 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~~~~------------  145 (257)
                         ++|+||||||....      ..+.+++...+++|+.++..+...+.           |..+..+.            
T Consensus        86 ---~~d~Vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~  156 (335)
T 1rpn_A           86 ---QPQEVYNLAAQSFV------GASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPF  156 (335)
T ss_dssp             ---CCSEEEECCSCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             ---CCCEEEECccccch------hhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCC
Confidence               69999999996431      01123467888999999998866552           11222211            


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh---------HhhhhhccccC--ccc--cccCCCC
Q 044485          146 AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD---------FLKLADDGLGG--MYS--NLKGAVL  212 (257)
Q Consensus       146 ~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~---------~~~~~~~~~~~--~~~--~~~~~~~  212 (257)
                      .+...|+.+|.+.+.+++.++.++   |+++..+.|+.+..+....         ...........  ...  .....++
T Consensus       157 ~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i  233 (335)
T 1rpn_A          157 YPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWG  233 (335)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceE
Confidence            123479999999999999998775   7888888887776553211         11100000000  011  1123467


Q ss_pred             CHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          213 EPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       213 ~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .++|+|++++.++....    ++.+++.+|..++
T Consensus       234 ~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s  263 (335)
T 1rpn_A          234 FAGDYVEAMWLMLQQDK----ADDYVVATGVTTT  263 (335)
T ss_dssp             EHHHHHHHHHHHHHSSS----CCCEEECCSCEEE
T ss_pred             EHHHHHHHHHHHHhcCC----CCEEEEeCCCCcc
Confidence            89999999999886543    4678888877654

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.81  E-value=3.2e-19  Score=151.72  Aligned_cols=218  Identities=15%  Similarity=0.121  Sum_probs=139.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      ++|||||+|+||++++++|+++|++|++++|......+..+.+....+  .++.++.+|++|+++++++++..     ++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~-----~~   74 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG--KHPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT--SCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcC--CcceEEEccCCCHHHHHHHhhcc-----CC
Confidence            699999999999999999999999999988753322222222211101  23778999999999998887642     59


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhcccc------------C-CCCch
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIG------------G-AATHA  150 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~------------~-~~~~~  150 (257)
                      |+||||||....  .    ...++....+++|+.++..+...+.          |..+..+            . +....
T Consensus        75 D~vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~  148 (338)
T 1udb_A           75 DTVIHFAGLKAV--G----ESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSP  148 (338)
T ss_dssp             SEEEECCSCCCH--H----HHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSH
T ss_pred             CEEEECCccCcc--c----cchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCCh
Confidence            999999996431  0    1234456788999999998865541          2222221            1 22568


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccCh----------------hhHhHhhhhhccccCc--c--------
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTP----------------LAKDFLKLADDGLGGM--Y--------  204 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~----------------~~~~~~~~~~~~~~~~--~--------  204 (257)
                      |+.+|++.+.+++.++.++  .|+++..++|+.+..+                +...............  .        
T Consensus       149 Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  226 (338)
T 1udb_A          149 YGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTED  226 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCC
Confidence            9999999999999998874  3788888887544322                1111111100000000  0        


Q ss_pred             ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          205 SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       205 ~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ......++.++|+|++++.++........++.+++.+|..++
T Consensus       227 g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s  268 (338)
T 1udb_A          227 GTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNS  268 (338)
T ss_dssp             SSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEE
T ss_pred             CceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCcee
Confidence            011224678999999998877532111234788887776544

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.81  E-value=8.2e-19  Score=151.71  Aligned_cols=216  Identities=17%  Similarity=0.053  Sum_probs=141.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh-----hHhHHHHhccCCCCCC-CceeEecCCCCHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-----GESVCKDIGSSSSSAS-GCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      |++|||||+|+||.+++++|+++|++|++++|+.+.     ++...++....   .. ++.++.+|++|.+++.++++..
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV---NKALMKLHYADLTDASSLRRWIDVI  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC-----------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc---cccceEEEECCCCCHHHHHHHHHhc
Confidence            689999999999999999999999999999998654     22221111100   11 3788999999999999888765


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh---------------hhcccc-------
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG---------------VCGIIG-------  144 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s---------------~~~~~~-------  144 (257)
                           ++|+||||||....      ..+.+++...+++|+.++..+.+.+..               ..+..+       
T Consensus       106 -----~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~  174 (381)
T 1n7h_A          106 -----KPDEVYNLAAQSHV------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQS  174 (381)
T ss_dssp             -----CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBC
T ss_pred             -----CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCC
Confidence                 69999999996532      123456788999999999987554421               112111       


Q ss_pred             ----CCCCchhhhhHHHHHHHHHHHHHHhcc---CCcEEEeecCCCccChhh---HhHhh-hhhccccC-cc--ccccCC
Q 044485          145 ----GAATHAYTSSKHGLLGLMKNTAVELGR---FGIRVNCVSPYAVSTPLA---KDFLK-LADDGLGG-MY--SNLKGA  210 (257)
Q Consensus       145 ----~~~~~~y~~sK~a~~~~~~~l~~e~~~---~gi~v~~i~pg~v~t~~~---~~~~~-~~~~~~~~-~~--~~~~~~  210 (257)
                          ..+...|+.+|.+.+.+++.++.+++-   ..+.++.+.||...+...   ..... ........ ..  ......
T Consensus       175 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~  254 (381)
T 1n7h_A          175 ETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRD  254 (381)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEE
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceee
Confidence                233568999999999999999887631   111223445554333211   11111 01110000 01  122345


Q ss_pred             CCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          211 VLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       211 ~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ++.++|+|+++++++....    ++.+++.+|..++
T Consensus       255 ~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~s  286 (381)
T 1n7h_A          255 WGFAGDYVEAMWLMLQQEK----PDDYVVATEEGHT  286 (381)
T ss_dssp             CEEHHHHHHHHHHHHTSSS----CCEEEECCSCEEE
T ss_pred             eEEHHHHHHHHHHHHhCCC----CCeEEeeCCCCCc
Confidence            7889999999999987643    4789998887654

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.81  E-value=1e-19  Score=153.62  Aligned_cols=208  Identities=15%  Similarity=0.096  Sum_probs=130.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-cchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ||++|||||+|+||++++++|+++|++|+++.| +.+..++.. .+........++.++.+|++|+++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVS-FLTNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCH-HHHTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHH-HHHhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            589999999999999999999999999999888 543211110 011111000126788899999998888765      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHH-HHHHHhhhchhhhHHHHHHH------------hhhccccCCC----------
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAE-FERILSINLVGAFLGRNMLL------------GVCGIIGGAA----------  147 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~------------s~~~~~~~~~----------  147 (257)
                       .+|+|||||+...        .+.++ +.+.+++|+.++.++.+...            |..+..+.+.          
T Consensus        74 -~~d~vih~A~~~~--------~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~  144 (322)
T 2p4h_X           74 -GCVGIFHTASPID--------FAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDW  144 (322)
T ss_dssp             -TCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCC
T ss_pred             -CCCEEEEcCCccc--------CCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccc
Confidence             5899999996321        11122 34588999999999876542            2221111110          


Q ss_pred             -----------C-chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH----hhhh-hccccC--cccccc
Q 044485          148 -----------T-HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF----LKLA-DDGLGG--MYSNLK  208 (257)
Q Consensus       148 -----------~-~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~----~~~~-~~~~~~--~~~~~~  208 (257)
                                 . ..|+.||.+.+.+++.++.+   +|+++++++||.+.+++....    .... ......  ......
T Consensus       145 ~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  221 (322)
T 2p4h_X          145 SDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTR  221 (322)
T ss_dssp             CCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEE
T ss_pred             cchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCC
Confidence                       1 16999999888877665543   589999999999988864211    0000 000000  000000


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCcccccEEEecC
Q 044485          209 GAVLEPEDAAEAALYLGSDESKCVSGHNLVVDG  241 (257)
Q Consensus       209 ~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dg  241 (257)
                      ..++.++|+|+++++++....  .+|+ +++.+
T Consensus       222 ~~~i~v~Dva~a~~~~~~~~~--~~g~-~~~~~  251 (322)
T 2p4h_X          222 FHMVHVDDVARAHIYLLENSV--PGGR-YNCSP  251 (322)
T ss_dssp             EEEEEHHHHHHHHHHHHHSCC--CCEE-EECCC
T ss_pred             cCEEEHHHHHHHHHHHhhCcC--CCCC-EEEcC
Confidence            137899999999999986532  5676 55543

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.80  E-value=8.2e-19  Score=147.65  Aligned_cols=199  Identities=18%  Similarity=0.120  Sum_probs=142.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |++|||||+|+||++++++|+++|++|++++|+....+     +.       .+.++.+|++ ++++.++++       +
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~-------~~~~~~~Dl~-~~~~~~~~~-------~   62 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----IN-------DYEYRVSDYT-LEDLINQLN-------D   62 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----------------CCEEEECCCC-HHHHHHHTT-------T
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----CC-------ceEEEEcccc-HHHHHHhhc-------C
Confidence            78999999999999999999999999999999843322     11       2788999999 888877765       7


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC------------CCCch
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG------------AATHA  150 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~------------~~~~~  150 (257)
                      +|+|||+|+.....          +....+++|+.++..+...+.          |..+..+.            .+...
T Consensus        63 ~d~Vih~a~~~~~~----------~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~  132 (311)
T 3m2p_A           63 VDAVVHLAATRGSQ----------GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLM  132 (311)
T ss_dssp             CSEEEECCCCCCSS----------SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSH
T ss_pred             CCEEEEccccCCCC----------ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCch
Confidence            99999999976431          235677888888888765552          22222221            22458


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH------hHhhhhhcccc-Ccc--ccccCCCCCHHHHHHHH
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK------DFLKLADDGLG-GMY--SNLKGAVLEPEDAAEAA  221 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~------~~~~~~~~~~~-~~~--~~~~~~~~~~~~~a~~~  221 (257)
                      |+.+|.+.+.+++.++.+   .|++++.++|+.+.++...      .+......... ...  ......++.++|+|+++
T Consensus       133 Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~  209 (311)
T 3m2p_A          133 YGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSV  209 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHH
Confidence            999999999999998875   5899999999998876543      11111110000 000  11223467899999999


Q ss_pred             HHhcCCCCCcccccEEEecCceeeee
Q 044485          222 LYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       222 ~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      +.++....   .|+.+++.+|..++-
T Consensus       210 ~~~~~~~~---~~~~~~i~~~~~~s~  232 (311)
T 3m2p_A          210 IYALKQEK---VSGTFNIGSGDALTN  232 (311)
T ss_dssp             HHHTTCTT---CCEEEEECCSCEECH
T ss_pred             HHHHhcCC---CCCeEEeCCCCcccH
Confidence            99997654   789999998876653

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.80  E-value=3.4e-19  Score=149.79  Aligned_cols=204  Identities=16%  Similarity=0.145  Sum_probs=142.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHc--CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKH--GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +|++|||||+|+||++++++|+++  |++|++++|+....+ ..   .       ++.++.+|++|++++++++++.   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~---~-------~~~~~~~D~~d~~~~~~~~~~~---   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV---N-------SGPFEVVNALDFNQIEHLVEVH---   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH---H-------SSCEEECCTTCHHHHHHHHHHT---
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc---C-------CCceEEecCCCHHHHHHHHhhc---
Confidence            478999999999999999999999  899999999865522 11   1       2678899999999998887653   


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC-------------C
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG-------------A  146 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~-------------~  146 (257)
                        ++|+|||+|+....       ...+++...+++|+.++..+...+.          |..+..+.             .
T Consensus        68 --~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~  138 (312)
T 2yy7_A           68 --KITDIYLMAALLSA-------TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIME  138 (312)
T ss_dssp             --TCCEEEECCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCC
T ss_pred             --CCCEEEECCccCCC-------chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCC
Confidence              69999999996421       1235577889999999998876652          22222211             1


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhh----------HhH-hhhhhccccCcc--ccccCCCCC
Q 044485          147 ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA----------KDF-LKLADDGLGGMY--SNLKGAVLE  213 (257)
Q Consensus       147 ~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~----------~~~-~~~~~~~~~~~~--~~~~~~~~~  213 (257)
                      +...|+.+|.+.+.+++.++.++   |++++.++|+.+..+..          ... ............  ......++.
T Consensus       139 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  215 (312)
T 2yy7_A          139 PSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMY  215 (312)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEE
T ss_pred             CCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeee
Confidence            24579999999999999988775   89999999998876421          011 110000000000  111223578


Q ss_pred             HHHHHHHHHHhcCCCCCcc-cccEEEecC
Q 044485          214 PEDAAEAALYLGSDESKCV-SGHNLVVDG  241 (257)
Q Consensus       214 ~~~~a~~~~~l~s~~~~~~-~G~~~~~dg  241 (257)
                      ++|+|++++.++....... .|+.+++.+
T Consensus       216 v~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          216 MDDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             HHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             HHHHHHHHHHHHhCcccccccCceEEeCC
Confidence            9999999999886543222 258888875

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.80  E-value=7.3e-19  Score=140.46  Aligned_cols=192  Identities=13%  Similarity=0.072  Sum_probs=121.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      ++|||||+|+||++++++|+++|++|++++|+.+.+++..          ..+.++.+|++|+++         +.+.++
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----------~~~~~~~~D~~d~~~---------~~~~~~   62 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH----------KDINILQKDIFDLTL---------SDLSDQ   62 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC----------SSSEEEECCGGGCCH---------HHHTTC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc----------CCCeEEeccccChhh---------hhhcCC
Confidence            6999999999999999999999999999999987654432          127899999999987         223579


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------HhhhccccCC------------CCch
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------LGVCGIIGGA------------ATHA  150 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------~s~~~~~~~~------------~~~~  150 (257)
                      |+||||||....               ...+|+.++..+...+           +|..+..+.+            +...
T Consensus        63 d~vi~~ag~~~~---------------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
T 3ew7_A           63 NVVVDAYGISPD---------------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPY  127 (221)
T ss_dssp             SEEEECCCSSTT---------------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCC
T ss_pred             CEEEECCcCCcc---------------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHH
Confidence            999999997432               1233444444443333           2222222211            2346


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH-hhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF-LKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      |+.+|.+.+.+. .+..  ...|++++.++||.+.++..... ........  ........+++++|+|++++.++.+..
T Consensus       128 y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~--~~~~~~~~~i~~~Dva~~~~~~l~~~~  202 (221)
T 3ew7_A          128 YPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGDYQIGKDHL--LFGSDGNSFISMEDYAIAVLDEIERPN  202 (221)
T ss_dssp             SCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC-----------------------CCCHHHHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCceEeccccc--eecCCCCceEeHHHHHHHHHHHHhCcc
Confidence            999999998873 2322  15799999999999988622111 00000000  001111247899999999999997654


Q ss_pred             CcccccEEEecCceeee
Q 044485          230 KCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~~  246 (257)
                        ..|+.+++.|-....
T Consensus       203 --~~g~~~~~~~~~~~~  217 (221)
T 3ew7_A          203 --HLNEHFTVAGKLEHH  217 (221)
T ss_dssp             --CTTSEEECCC-----
T ss_pred             --ccCCEEEECCCCccc
Confidence              578999888765543

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.80  E-value=2e-18  Score=148.96  Aligned_cols=214  Identities=15%  Similarity=0.068  Sum_probs=142.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh-----hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-----GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++.+.++....  ...++.++.+|++|++++.++++.. 
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH--IEGNMKLHYGDLTDSTCLVKIINEV-  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-----------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc--cCCCceEEEccCCCHHHHHHHHHhc-
Confidence            689999999999999999999999999999998643     22221111000  0123788999999999999888765 


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh-------------hcccc----------
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV-------------CGIIG----------  144 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~-------------~~~~~----------  144 (257)
                          ++|+||||||....      ..+.+++...+++|+.++..+.+.+...             .+..+          
T Consensus       102 ----~~d~vih~A~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~  171 (375)
T 1t2a_A          102 ----KPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET  171 (375)
T ss_dssp             ----CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred             ----CCCEEEECCCcccc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCcc
Confidence                69999999996431      1234667889999999999886655321             11111          


Q ss_pred             --CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH---------hHhh-hhhccccC-cc--ccccC
Q 044485          145 --GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK---------DFLK-LADDGLGG-MY--SNLKG  209 (257)
Q Consensus       145 --~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~---------~~~~-~~~~~~~~-~~--~~~~~  209 (257)
                        ..+...|+.+|++.+.+++.++.++   |+.+..+.|+.+..|...         .... ........ ..  .....
T Consensus       172 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  248 (375)
T 1t2a_A          172 TPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR  248 (375)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCcee
Confidence              1234589999999999999998875   677777777665543211         1110 00110000 01  11223


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          210 AVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       210 ~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .++.++|+|++++.++....    ++.+++.+|..++
T Consensus       249 ~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s  281 (375)
T 1t2a_A          249 DWGHAKDYVEAMWLMLQNDE----PEDFVIATGEVHS  281 (375)
T ss_dssp             CCEEHHHHHHHHHHHHHSSS----CCCEEECCSCCEE
T ss_pred             eeEEHHHHHHHHHHHHhcCC----CceEEEeCCCccc
Confidence            47789999999998886542    3667887776543

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.80  E-value=5.4e-19  Score=150.78  Aligned_cols=211  Identities=15%  Similarity=0.113  Sum_probs=139.9

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ...++++++|||||+|+||++++++|+++|++|++++|+.....+..+.+..    ..++.++.+|+.++.         
T Consensus        22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~---------   88 (343)
T 2b69_A           22 HMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG----HENFELINHDVVEPL---------   88 (343)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTT----CTTEEEEECCTTSCC---------
T ss_pred             ccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhcc----CCceEEEeCccCChh---------
Confidence            3457789999999999999999999999999999999875432222222211    123788999998752         


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccc--------------
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGII--------------  143 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~--------------  143 (257)
                         +.++|+|||||+....  ...    .+++...+++|+.++..+.....         |..+..              
T Consensus        89 ---~~~~d~vih~A~~~~~--~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~  159 (343)
T 2b69_A           89 ---YIEVDQIYHLASPASP--PNY----MYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWG  159 (343)
T ss_dssp             ---CCCCSEEEECCSCCSH--HHH----TTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCC
T ss_pred             ---hcCCCEEEECccccCc--hhh----hhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCCCCCCcccccc
Confidence               3579999999996532  100    12346778899999998866552         222222              


Q ss_pred             ---cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH--------hHhhh-hhccccCcc--ccccC
Q 044485          144 ---GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK--------DFLKL-ADDGLGGMY--SNLKG  209 (257)
Q Consensus       144 ---~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~--------~~~~~-~~~~~~~~~--~~~~~  209 (257)
                         +......|+.+|.+.+.+++.++.++   |++++.++||.+.++...        .+... .........  .....
T Consensus       160 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (343)
T 2b69_A          160 HVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTR  236 (343)
T ss_dssp             BCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEE
T ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEE
Confidence               11223469999999999999988764   899999999999877421        11110 000000001  11123


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          210 AVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       210 ~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .++.++|+|++++.++...    .|+.+++.+|..++
T Consensus       237 ~~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~~s  269 (343)
T 2b69_A          237 AFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEHT  269 (343)
T ss_dssp             ECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEEE
T ss_pred             eeEeHHHHHHHHHHHHhcC----CCCeEEecCCCCCc
Confidence            4678999999999988654    26788998887654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.80  E-value=3.4e-19  Score=148.60  Aligned_cols=191  Identities=15%  Similarity=0.142  Sum_probs=134.5

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .+.+++|||||+|+||++++++|+++|++|++++|+                        .+|++|++++++++++.   
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~Dl~d~~~~~~~~~~~---   62 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------------DLDITNVLAVNKFFNEK---   62 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------------TCCTTCHHHHHHHHHHH---
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc------------------------cCCCCCHHHHHHHHHhc---
Confidence            456899999999999999999999999999999886                        16999999998888754   


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccccC------------CCC
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGIIGG------------AAT  148 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~~~------------~~~  148 (257)
                        ++|+||||||....      ..+.+++...+++|+.++..+.+.+.         |..+..+.            .+.
T Consensus        63 --~~d~vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~~~~~~~~~E~~~~~~~  134 (292)
T 1vl0_A           63 --KPNVVINCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQ  134 (292)
T ss_dssp             --CCSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCC
T ss_pred             --CCCEEEECCccCCH------HHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechHHeECCCCCCCCCCCCCCCCc
Confidence              69999999996421      12346678899999999999876552         22222221            124


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccCh---hhHhHhhhhh-ccccCccccccCCCCCHHHHHHHHHHh
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTP---LAKDFLKLAD-DGLGGMYSNLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~l  224 (257)
                      ..|+.+|.+.+.+++.++.       .++.++|+.+.++   .......... .............++.++|+|++++++
T Consensus       135 ~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  207 (292)
T 1vl0_A          135 SAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKV  207 (292)
T ss_dssp             SHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCCCcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHH
Confidence            5899999999999988653       3566677666643   2221111111 000001122234578899999999999


Q ss_pred             cCCCCCcccccEEEecCceeee
Q 044485          225 GSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       225 ~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +++.    .|+.+++++|..++
T Consensus       208 ~~~~----~~~~~~i~~~~~~s  225 (292)
T 1vl0_A          208 IDEK----NYGTFHCTCKGICS  225 (292)
T ss_dssp             HHHT----CCEEEECCCBSCEE
T ss_pred             HhcC----CCcEEEecCCCCcc
Confidence            8764    68899999986654

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.79  E-value=1.4e-18  Score=160.50  Aligned_cols=213  Identities=15%  Similarity=0.138  Sum_probs=148.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHH-HHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKH-GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKD-IENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-v~~~~~~~~   87 (257)
                      +++|++|||||+|+||++++++|+++ |++|++++|+....++..+        ..++.++.+|++|.++ ++++++   
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~--------~~~v~~v~~Dl~d~~~~~~~~~~---  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--------HPHFHFVEGDISIHSEWIEYHVK---  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT--------CTTEEEEECCTTTCHHHHHHHHH---
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc--------CCceEEEECCCCCcHHHHHHhhc---
Confidence            46789999999999999999999998 8999999998765433211        1238889999999765 555544   


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccccC-------------
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGIIGG-------------  145 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~~~-------------  145 (257)
                          ++|+||||||....  .    ...+++...+++|+.++..+.....         |..+..+.             
T Consensus       382 ----~~D~Vih~Aa~~~~--~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~~~E~~~~~  451 (660)
T 1z7e_A          382 ----KCDVVLPLVAIATP--I----EYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNL  451 (660)
T ss_dssp             ----HCSEEEECCCCCCT--H----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSSBCTTTCCE
T ss_pred             ----CCCEEEECceecCc--c----ccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCcccCCCcccc
Confidence                48999999996532  0    1234567889999999988866542         22222211             


Q ss_pred             ------CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh--------------Hhhhhhcccc-Ccc
Q 044485          146 ------AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD--------------FLKLADDGLG-GMY  204 (257)
Q Consensus       146 ------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~--------------~~~~~~~~~~-~~~  204 (257)
                            .....|+.+|.+.+.+++.++.++   |++++.++||.+.++....              +......... ...
T Consensus       452 ~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  528 (660)
T 1z7e_A          452 IVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLI  528 (660)
T ss_dssp             EECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEE
T ss_pred             ccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEe
Confidence                  112269999999999999998775   8999999999998765321              1000000000 000


Q ss_pred             --ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCce-eee
Q 044485          205 --SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGF-AIV  246 (257)
Q Consensus       205 --~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~-~~~  246 (257)
                        ......++.++|+|+++++++........|+++++++|. .++
T Consensus       529 g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s  573 (660)
T 1z7e_A          529 DGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEAS  573 (660)
T ss_dssp             GGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEE
T ss_pred             CCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcC
Confidence              112234778999999999998765445679999999985 444

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.79  E-value=2.3e-20  Score=148.71  Aligned_cols=190  Identities=15%  Similarity=0.078  Sum_probs=134.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+|+++||||+|+||++++++|+++|+  +|++++|+.+.        .     ..++.++.+|++|++++++++     
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~--------~-----~~~~~~~~~D~~~~~~~~~~~-----   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------E-----HPRLDNPVGPLAELLPQLDGS-----   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------C-----CTTEECCBSCHHHHGGGCCSC-----
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc--------c-----CCCceEEeccccCHHHHHHhh-----
Confidence            368999999999999999999999998  99999998754        0     123778899999887765543     


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------hhccccCCCCchhhhhHHHH
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------VCGIIGGAATHAYTSSKHGL  158 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------~~~~~~~~~~~~y~~sK~a~  158 (257)
                          +|+||||||....        +.+++.+.+++|+.++..+.+.+..          ..+..+ .....|+.+|.++
T Consensus        66 ----~d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~-~~~~~y~~sK~~~  132 (215)
T 2a35_A           66 ----IDTAFCCLGTTIK--------EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA-KSSIFYNRVKGEL  132 (215)
T ss_dssp             ----CSEEEECCCCCHH--------HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-TCSSHHHHHHHHH
T ss_pred             ----hcEEEECeeeccc--------cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC-CCccHHHHHHHHH
Confidence                8999999996421        1345678889999999988766522          111112 2346899999999


Q ss_pred             HHHHHHHHHHhccCCcE-EEeecCCCccChhhHh-HhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccE
Q 044485          159 LGLMKNTAVELGRFGIR-VNCVSPYAVSTPLAKD-FLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHN  236 (257)
Q Consensus       159 ~~~~~~l~~e~~~~gi~-v~~i~pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~  236 (257)
                      +.+++.       .|++ ++.++||++.++.... .............. ....+++++|+|++++.++....    ++.
T Consensus       133 e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~Dva~~~~~~~~~~~----~~~  200 (215)
T 2a35_A          133 EQALQE-------QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILP-GKYHGIEACDLARALWRLALEEG----KGV  200 (215)
T ss_dssp             HHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGGTTCCCC-----CHHHHHHHHHHHHHHHHHHTCCC----SEE
T ss_pred             HHHHHH-------cCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccC-CCcCcEeHHHHHHHHHHHHhcCC----CCc
Confidence            998875       3898 9999999999875431 11110000000000 01235678999999999987653    667


Q ss_pred             EEecCce
Q 044485          237 LVVDGGF  243 (257)
Q Consensus       237 ~~~dgG~  243 (257)
                      +++.++.
T Consensus       201 ~~i~~~~  207 (215)
T 2a35_A          201 RFVESDE  207 (215)
T ss_dssp             EEEEHHH
T ss_pred             eEEcHHH
Confidence            7777664

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.79  E-value=1.3e-18  Score=161.76  Aligned_cols=227  Identities=13%  Similarity=0.124  Sum_probs=145.5

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |++.+.+|+||||||+|+||++++++|+++|++|++++|+.....+..+++.....  .++.++.+|++|++++++++++
T Consensus         5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~v~~v~~Dl~d~~~l~~~~~~   82 (699)
T 1z45_A            5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK--HHIPFYEVDLCDRKGLEKVFKE   82 (699)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHT--SCCCEEECCTTCHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccC--CceEEEEcCCCCHHHHHHHHHh
Confidence            45567889999999999999999999999999999999876543322222211101  2378899999999999888764


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhcccc-----------
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIG-----------  144 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~-----------  144 (257)
                      .     ++|+||||||....  .    ...+.....+++|+.++..+...+.          |..+..+           
T Consensus        83 ~-----~~D~Vih~A~~~~~--~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~  151 (699)
T 1z45_A           83 Y-----KIDSVIHFAGLKAV--G----ESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPI  151 (699)
T ss_dssp             S-----CCCEEEECCSCCCH--H----HHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSB
T ss_pred             C-----CCCEEEECCcccCc--C----ccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCc
Confidence            3     69999999996532  1    1123345678999999998865541          2222221           


Q ss_pred             -----CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhh----------------HhHhhhhhccccCc
Q 044485          145 -----GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA----------------KDFLKLADDGLGGM  203 (257)
Q Consensus       145 -----~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~----------------~~~~~~~~~~~~~~  203 (257)
                           ......|+.+|++.+.+++.++.+. +.|+++++++|+.+..+..                ..............
T Consensus       152 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  230 (699)
T 1z45_A          152 PEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKL  230 (699)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCC
T ss_pred             cccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCce
Confidence                 1123589999999999999998775 4689999999876654321                11111000000000


Q ss_pred             --c--------ccccCCCCCHHHHHHHHHHhcCCC----CCcccccEEEecCceeee
Q 044485          204 --Y--------SNLKGAVLEPEDAAEAALYLGSDE----SKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       204 --~--------~~~~~~~~~~~~~a~~~~~l~s~~----~~~~~G~~~~~dgG~~~~  246 (257)
                        .        ......++..+|+|++++.++...    ...-.|+.+++.+|..++
T Consensus       231 ~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s  287 (699)
T 1z45_A          231 YIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGST  287 (699)
T ss_dssp             CCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEE
T ss_pred             EEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCc
Confidence              0        111234678999999998877531    111246788998876554

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.78  E-value=1.5e-18  Score=144.15  Aligned_cols=191  Identities=9%  Similarity=0.029  Sum_probs=134.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc--CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           13 KVALITGGARGIGECTARLFSKH--GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      |++|||||+|+||++++++|+++  |++|++++|+.+..+++..         ..+.++.+|++|++++.++++      
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~---------~~~~~~~~D~~d~~~l~~~~~------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD---------QGVEVRHGDYNQPESLQKAFA------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH---------TTCEEEECCTTCHHHHHHHTT------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh---------cCCeEEEeccCCHHHHHHHHh------
Confidence            46999999999999999999999  9999999998766544322         127889999999998887765      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccCCCCchhhhhHHHHHH
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGGAATHAYTSSKHGLLG  160 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~~~~~~y~~sK~a~~~  160 (257)
                       ++|+|||+|+...         . +      ++|+.++.++.....          |..+..  .....|+.+|.+.+.
T Consensus        66 -~~d~vi~~a~~~~---------~-~------~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~--~~~~~y~~~K~~~E~  126 (287)
T 2jl1_A           66 -GVSKLLFISGPHY---------D-N------TLLIVQHANVVKAARDAGVKHIAYTGYAFAE--ESIIPLAHVHLATEY  126 (287)
T ss_dssp             -TCSEEEECCCCCS---------C-H------HHHHHHHHHHHHHHHHTTCSEEEEEEETTGG--GCCSTHHHHHHHHHH
T ss_pred             -cCCEEEEcCCCCc---------C-c------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCC--CCCCchHHHHHHHHH
Confidence             5899999998521         1 1      456667766654441          211211  223489999999999


Q ss_pred             HHHHHHHHhccCCcEEEeecCCCccChhhHhHh-hhh-hccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEE
Q 044485          161 LMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFL-KLA-DDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLV  238 (257)
Q Consensus       161 ~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~  238 (257)
                      +++.       .|++++.++||++.++...... ... ..............++.++|+|++++.++....  ..|+.++
T Consensus       127 ~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~  197 (287)
T 2jl1_A          127 AIRT-------TNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG--HENKTYN  197 (287)
T ss_dssp             HHHH-------TTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS--CTTEEEE
T ss_pred             HHHH-------cCCCeEEEECCEeccccchhhHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC--CCCcEEE
Confidence            8863       5899999999998776521111 111 110000011223467899999999999987643  4789999


Q ss_pred             ecCceeee
Q 044485          239 VDGGFAIV  246 (257)
Q Consensus       239 ~dgG~~~~  246 (257)
                      +.+|..++
T Consensus       198 i~~~~~~s  205 (287)
T 2jl1_A          198 LVSNQPWT  205 (287)
T ss_dssp             ECCSSCBC
T ss_pred             ecCCCcCC
Confidence            99986554

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.78  E-value=2.1e-18  Score=142.19  Aligned_cols=191  Identities=20%  Similarity=0.128  Sum_probs=131.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      ++|||||+|+||++++++|+ +|++|++++|+.+. +           .  .   +.+|++|+++++++++..     ++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~-----------~--~---~~~Dl~~~~~~~~~~~~~-----~~   58 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q-----------G--G---YKLDLTDFPRLEDFIIKK-----RP   58 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T-----------T--C---EECCTTSHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C-----------C--C---ceeccCCHHHHHHHHHhc-----CC
Confidence            69999999999999999999 58999999998742 0           0  1   789999999999888765     69


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccCC----------CCchhhh
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGGA----------ATHAYTS  153 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~~----------~~~~y~~  153 (257)
                      |+||||||....      ..+.+++.+.+++|+.++..+.+.+.          |.....+..          +...|+.
T Consensus        59 d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~  132 (273)
T 2ggs_A           59 DVIINAAAMTDV------DKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGL  132 (273)
T ss_dssp             SEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHH
T ss_pred             CEEEECCcccCh------hhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHH
Confidence            999999996532      12346788999999999999877662          122211111          2468999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccc-cCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGL-GGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      +|++.+.+++.    +.-..+|++.|. |  ++++............ ...... ...++.++|+|+++++++++..   
T Consensus       133 sK~~~e~~~~~----~~~~~iR~~~v~-G--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~~~---  201 (273)
T 2ggs_A          133 SKLLGETFALQ----DDSLIIRTSGIF-R--NKGFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLELRK---  201 (273)
T ss_dssp             HHHHHHHHHCC----TTCEEEEECCCB-S--SSSHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHHTC---
T ss_pred             HHHHHHHHHhC----CCeEEEeccccc-c--ccHHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhcCc---
Confidence            99999999987    222345555555 3  3443322211111100 001111 3468899999999999997642   


Q ss_pred             cccEEEecCceeee
Q 044485          233 SGHNLVVDGGFAIV  246 (257)
Q Consensus       233 ~G~~~~~dgG~~~~  246 (257)
                      +| .+++++ ..++
T Consensus       202 ~g-~~~i~~-~~~s  213 (273)
T 2ggs_A          202 TG-IIHVAG-ERIS  213 (273)
T ss_dssp             CE-EEECCC-CCEE
T ss_pred             CC-eEEECC-Cccc
Confidence            45 788887 5544

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.76  E-value=8.2e-19  Score=147.89  Aligned_cols=208  Identities=16%  Similarity=0.116  Sum_probs=130.9

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +.++.++++|||||+|+||++++++|+++|++|++++|+........+.+.... ....+.++.+|++            
T Consensus         2 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~------------   68 (321)
T 3vps_A            2 QRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL-EKPVLELEERDLS------------   68 (321)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE-CSCGGGCCHHHHT------------
T ss_pred             CcccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc-cCCCeeEEeCccc------------
Confidence            344567899999999999999999999999999999998752100001111100 0122566677765            


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC-----------
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG-----------  145 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~-----------  145 (257)
                           ++|+|||+|+....  .....    +....++ |+.++..+...+.          |..+..+.           
T Consensus        69 -----~~d~vi~~a~~~~~--~~~~~----~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~  136 (321)
T 3vps_A           69 -----DVRLVYHLASHKSV--PRSFK----QPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSP  136 (321)
T ss_dssp             -----TEEEEEECCCCCCH--HHHTT----STTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             -----cCCEEEECCccCCh--HHHHh----CHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCC
Confidence                 69999999997542  00011    1123444 7777777755541          22222221           


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHHHhccCCc-EEEeecCCCccChhhHh------Hhhhh-hccccCcc--ccccCCCCCH
Q 044485          146 -AATHAYTSSKHGLLGLMKNTAVELGRFGI-RVNCVSPYAVSTPLAKD------FLKLA-DDGLGGMY--SNLKGAVLEP  214 (257)
Q Consensus       146 -~~~~~y~~sK~a~~~~~~~l~~e~~~~gi-~v~~i~pg~v~t~~~~~------~~~~~-~~~~~~~~--~~~~~~~~~~  214 (257)
                       .+...|+.+|.+.+.+++.++.+   .|+ +++.++|+.+.++....      +.... ....-...  ......++.+
T Consensus       137 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  213 (321)
T 3vps_A          137 LSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYI  213 (321)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEH
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEH
Confidence             22467999999999999998876   588 99999999988765321      11110 00000000  1122346789


Q ss_pred             HHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          215 EDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       215 ~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +|+|+++++++....   .| .+++.+|..++
T Consensus       214 ~Dva~~~~~~~~~~~---~g-~~~i~~~~~~s  241 (321)
T 3vps_A          214 TDVVDKLVALANRPL---PS-VVNFGSGQSLS  241 (321)
T ss_dssp             HHHHHHHHHGGGSCC---CS-EEEESCSCCEE
T ss_pred             HHHHHHHHHHHhcCC---CC-eEEecCCCccc
Confidence            999999999998764   37 99999887655

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.76  E-value=2.5e-18  Score=144.24  Aligned_cols=206  Identities=16%  Similarity=0.180  Sum_probs=139.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC-CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           14 VALITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      ++|||||+|+||++++++|+++| ++|++++|+.....  .+.+..       +. +.+|++|.++++++++...  +++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~-------~~-~~~d~~~~~~~~~~~~~~~--~~~   68 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD-------LN-IADYMDKEDFLIQIMAGEE--FGD   68 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT-------SC-CSEEEEHHHHHHHHHTTCC--CSS
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc-------ce-eccccccHHHHHHHHhccc--cCC
Confidence            48999999999999999999999 89999998765421  111211       22 6789999888777664110  126


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccccC------------CCCchh
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGIIGG------------AATHAY  151 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~~~------------~~~~~y  151 (257)
                      +|+|||||+....        +.+++...+++|+.++..+...+.         |..+..+.            .+...|
T Consensus        69 ~d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y  140 (310)
T 1eq2_A           69 VEAIFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVY  140 (310)
T ss_dssp             CCEEEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHH
T ss_pred             CcEEEECcccccC--------cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhCCCCCCCCCCCCCCCCCChh
Confidence            9999999996532        123357788999999998866542         12222221            124579


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh------H----hhhhhccc-cCcc--ccc-cCCCCCHHHH
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD------F----LKLADDGL-GGMY--SNL-KGAVLEPEDA  217 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~------~----~~~~~~~~-~~~~--~~~-~~~~~~~~~~  217 (257)
                      +.+|.+.+.+++.++.+   .|++++.++||.+.++....      .    ........ -...  ... ...++.++|+
T Consensus       141 ~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dv  217 (310)
T 1eq2_A          141 GYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDV  217 (310)
T ss_dssp             HHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHH
Confidence            99999999999998765   48999999999998775321      1    00000000 0011  112 3356789999


Q ss_pred             HHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          218 AEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       218 a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      |++++.++....    |+.+++.+|..++
T Consensus       218 a~~~~~~~~~~~----~~~~~i~~~~~~s  242 (310)
T 1eq2_A          218 ADVNLWFLENGV----SGIFNLGTGRAES  242 (310)
T ss_dssp             HHHHHHHHHHCC----CEEEEESCSCCBC
T ss_pred             HHHHHHHHhcCC----CCeEEEeCCCccC
Confidence            999999887543    7899998886554

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.76  E-value=3.7e-18  Score=143.86  Aligned_cols=200  Identities=18%  Similarity=0.212  Sum_probs=136.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHc--CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           14 VALITGGARGIGECTARLFSKH--GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      ++|||||+|+||++++++|+++  |++|++++|+.+..+              .+.++.+|++|++++++++++.     
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--------------~~~~~~~D~~d~~~~~~~~~~~-----   61 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG--------------GIKFITLDVSNRDEIDRAVEKY-----   61 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT--------------TCCEEECCTTCHHHHHHHHHHT-----
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc--------------CceEEEecCCCHHHHHHHHhhc-----
Confidence            4899999999999999999999  899999998764321              1578899999999998887642     


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC-------------CCC
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG-------------AAT  148 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~-------------~~~  148 (257)
                      ++|+|||+|+....       ...+++...+++|+.++..+...+.          |..+..+.             .+.
T Consensus        62 ~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~  134 (317)
T 3ajr_A           62 SIDAIFHLAGILSA-------KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPR  134 (317)
T ss_dssp             TCCEEEECCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC
T ss_pred             CCcEEEECCcccCC-------ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCC
Confidence            69999999996421       1234567889999999999876552          22222221             125


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChh----------hHhHh-hhh-hccccCcc-ccccCCCCCHH
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPL----------AKDFL-KLA-DDGLGGMY-SNLKGAVLEPE  215 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~----------~~~~~-~~~-~~~~~~~~-~~~~~~~~~~~  215 (257)
                      ..|+.+|.+.+.+++.+++++   |++++.++|+.+..+.          ....+ ... ........ ......++..+
T Consensus       135 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  211 (317)
T 3ajr_A          135 TMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMP  211 (317)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHH
T ss_pred             chHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHH
Confidence            689999999999999887664   8999999865443321          11111 100 00000000 11112356789


Q ss_pred             HHHHHHHHhcCCCC-CcccccEEEecCc
Q 044485          216 DAAEAALYLGSDES-KCVSGHNLVVDGG  242 (257)
Q Consensus       216 ~~a~~~~~l~s~~~-~~~~G~~~~~dgG  242 (257)
                      |+|++++.++.... ....|+.+++.|+
T Consensus       212 Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          212 DALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             HHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             HHHHHHHHHHhCCccccccCceEecCCc
Confidence            99999988875543 2335788999864

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.76  E-value=2e-18  Score=143.55  Aligned_cols=188  Identities=16%  Similarity=0.095  Sum_probs=134.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +++|||||+|+||++++++|+++|++|++++|.                        .+|++|++++.+++++.     +
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~D~~d~~~~~~~~~~~-----~   56 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK------------------------LLDITNISQVQQVVQEI-----R   56 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT------------------------TSCTTCHHHHHHHHHHH-----C
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc------------------------ccCCCCHHHHHHHHHhc-----C
Confidence            389999999999999999999999999999982                        26999999999888765     6


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccccC------------CCCchh
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGIIGG------------AATHAY  151 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~~~------------~~~~~y  151 (257)
                      +|+|||+|+....      ..+.+++...+++|+.++..+...+.         |.....+.            .+...|
T Consensus        57 ~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  130 (287)
T 3sc6_A           57 PHIIIHCAAYTKV------DQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIY  130 (287)
T ss_dssp             CSEEEECCCCCCH------HHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHH
T ss_pred             CCEEEECCcccCh------HHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhcCCCCCCCCCCCCCCCCCCHH
Confidence            9999999997532      11123567889999999999866652         22222211            224589


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH----hhhhh-ccccCccccccCCCCCHHHHHHHHHHhcC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF----LKLAD-DGLGGMYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      +.+|.+.+.+++.++.       +.+.++|+.+.++.....    ..... ...-.........++.++|+|+++++++.
T Consensus       131 ~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  203 (287)
T 3sc6_A          131 GASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIH  203 (287)
T ss_dssp             HHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHh
Confidence            9999999999987654       457888988876532221    11110 00000112233457789999999999997


Q ss_pred             CCCCcccccEEEecCceeee
Q 044485          227 DESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ...    ++.+++.+|..++
T Consensus       204 ~~~----~~~~~i~~~~~~s  219 (287)
T 3sc6_A          204 TSL----YGTYHVSNTGSCS  219 (287)
T ss_dssp             SCC----CEEEECCCBSCEE
T ss_pred             CCC----CCeEEEcCCCccc
Confidence            754    6689998887554

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.76  E-value=7.6e-18  Score=139.83  Aligned_cols=188  Identities=13%  Similarity=0.040  Sum_probs=127.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHc--CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           14 VALITGGARGIGECTARLFSKH--GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      ++|||||+|+||++++++|+++  |++|++++|+.+..++...    .     .+.++.+|++|++++.++++       
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~----~-----~~~~~~~D~~d~~~~~~~~~-------   64 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA----Q-----GITVRQADYGDEAALTSALQ-------   64 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH----T-----TCEEEECCTTCHHHHHHHTT-------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc----C-----CCeEEEcCCCCHHHHHHHHh-------
Confidence            4899999999999999999999  9999999998776544322    1     27889999999998887764       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------HhhhccccCCCCchhhhhHHHHHHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGIIGGAATHAYTSSKHGLLGL  161 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~~~~~~~~y~~sK~a~~~~  161 (257)
                      ++|+|||+|+...   .               .|+.++..+....          +|..+..  .....|+.+|.+.+.+
T Consensus        65 ~~d~vi~~a~~~~---~---------------~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~--~~~~~y~~sK~~~e~~  124 (286)
T 2zcu_A           65 GVEKLLLISSSEV---G---------------QRAPQHRNVINAAKAAGVKFIAYTSLLHAD--TSPLGLADEHIETEKM  124 (286)
T ss_dssp             TCSEEEECC--------------------------CHHHHHHHHHHHHTCCEEEEEEETTTT--TCCSTTHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCc---h---------------HHHHHHHHHHHHHHHcCCCEEEEECCCCCC--CCcchhHHHHHHHHHH
Confidence            5899999998521   0               1333444433222          1221211  2335899999999998


Q ss_pred             HHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh-hccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEec
Q 044485          162 MKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA-DDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVD  240 (257)
Q Consensus       162 ~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~d  240 (257)
                      ++.       .|++++.++||++.++......... ..............++.++|+|+++++++.+..  ..|+.++++
T Consensus       125 ~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~  195 (286)
T 2zcu_A          125 LAD-------SGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG--HEGKVYELA  195 (286)
T ss_dssp             HHH-------HCSEEEEEEECCBHHHHHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CTTCEEEEC
T ss_pred             HHH-------cCCCeEEEeChHHhhhhHHHhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC--CCCceEEEe
Confidence            864       4899999999998776542221111 111100001233457899999999999987643  479999999


Q ss_pred             Cceeee
Q 044485          241 GGFAIV  246 (257)
Q Consensus       241 gG~~~~  246 (257)
                      ||..++
T Consensus       196 ~~~~~s  201 (286)
T 2zcu_A          196 GDSAWT  201 (286)
T ss_dssp             CSSCBC
T ss_pred             CCCcCC
Confidence            986544

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.76  E-value=9.9e-18  Score=149.28  Aligned_cols=217  Identities=13%  Similarity=0.076  Sum_probs=142.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHc---CCeEEEeeCcchhhHhHH---HHhccCC---------CCCCCceeEecC
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKH---GAKVLIADIKDDLGESVC---KDIGSSS---------SSASGCSYVHCD   72 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~---g~~Vi~~~r~~~~~~~~~---~~~~~~~---------~~~~~v~~~~~D   72 (257)
                      ...++|+||||||+|+||++++++|+++   |++|++++|+.+..+...   +.+....         ....++.++.+|
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            3567899999999999999999999999   999999999876432221   1111100         001348999999


Q ss_pred             CC------CHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------
Q 044485           73 VT------KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------  137 (257)
Q Consensus        73 ~~------~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------  137 (257)
                      ++      |.++++++++       ++|+|||||+....          +.+...+++|+.++..+.....         
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~----------~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~  211 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA----------FPYHELFGPNVAGTAELIRIALTTKLKPFTY  211 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB----------SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEE
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccCC----------cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence            98      5556666554       59999999997532          1234677899999998876551         


Q ss_pred             -hhhccccCCC-----------------------CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhh----
Q 044485          138 -GVCGIIGGAA-----------------------THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLA----  189 (257)
Q Consensus       138 -s~~~~~~~~~-----------------------~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~----  189 (257)
                       |..+..+...                       ...|+.+|.+.+.+++.++.+.   |+++++++||.+..+..    
T Consensus       212 iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~~~~g~  288 (478)
T 4dqv_A          212 VSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADTSYAGQ  288 (478)
T ss_dssp             EEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCSSSSSC
T ss_pred             EeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCCccCCc
Confidence             2222222110                       1239999999999999988764   89999999999876421    


Q ss_pred             -------HhHhhhh-h-ccccCcc---------ccccCCCCCHHHHHHHHHHhcCCC--CCcccccEEEecCcee
Q 044485          190 -------KDFLKLA-D-DGLGGMY---------SNLKGAVLEPEDAAEAALYLGSDE--SKCVSGHNLVVDGGFA  244 (257)
Q Consensus       190 -------~~~~~~~-~-~~~~~~~---------~~~~~~~~~~~~~a~~~~~l~s~~--~~~~~G~~~~~dgG~~  244 (257)
                             ....... . ......+         ......++..+|+|++++.++...  .....|++|++.++..
T Consensus       289 ~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~  363 (478)
T 4dqv_A          289 LNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHD  363 (478)
T ss_dssp             CCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCC
T ss_pred             CCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCC
Confidence                   0111000 0 0000000         011123578999999999887541  1224688999988764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.76  E-value=4.6e-18  Score=143.48  Aligned_cols=199  Identities=14%  Similarity=0.163  Sum_probs=139.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||+|+||++++++|+++|++|+++.|+.                       .+|++|.+++++++++.     
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-----------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-----------------------cCCccCHHHHHHHHHhc-----
Confidence            47999999999999999999999999999887752                       16999999988887654     


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC--------------CC
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG--------------AA  147 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~--------------~~  147 (257)
                      ++|+|||+|+....     .....++....+++|+.++..+.....          |..+..+.              +.
T Consensus        55 ~~d~vih~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~  129 (321)
T 1e6u_A           55 RIDQVYLAAAKVGG-----IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTL  129 (321)
T ss_dssp             CCSEEEECCCCCCC-----HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred             CCCEEEEcCeecCC-----cchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCC
Confidence            69999999996431     111234567788999999988866552          22222211              11


Q ss_pred             ---CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH----------hHhhhhhc----cccCc--c--cc
Q 044485          148 ---THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK----------DFLKLADD----GLGGM--Y--SN  206 (257)
Q Consensus       148 ---~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~----------~~~~~~~~----~~~~~--~--~~  206 (257)
                         ...|+.+|.+.+.+++.++.++   |++++.++|+.+.++...          .+......    .....  .  ..
T Consensus       130 ~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~  206 (321)
T 1e6u_A          130 EPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGT  206 (321)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSC
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCC
Confidence               2489999999999999988765   899999999998876432          11111000    00000  1  11


Q ss_pred             ccCCCCCHHHHHHHHHHhcCCCCCc------ccccEEEecCceeee
Q 044485          207 LKGAVLEPEDAAEAALYLGSDESKC------VSGHNLVVDGGFAIV  246 (257)
Q Consensus       207 ~~~~~~~~~~~a~~~~~l~s~~~~~------~~G~~~~~dgG~~~~  246 (257)
                      ....++.++|+|++++.++......      ..|+.+++.+|..++
T Consensus       207 ~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  252 (321)
T 1e6u_A          207 PMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCT  252 (321)
T ss_dssp             CEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEE
T ss_pred             EEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCcc
Confidence            2234678999999999888654311      247889998876554

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.75  E-value=2.1e-19  Score=152.87  Aligned_cols=205  Identities=18%  Similarity=0.185  Sum_probs=130.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH--HHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV--CKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~--~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+..++.  ...+..    ..++.++.+|++|+++++++++     
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~-----   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQE----LGDLKIFRADLTDELSFEAPIA-----   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGG----GSCEEEEECCTTTSSSSHHHHT-----
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCC----CCcEEEEecCCCChHHHHHHHc-----
Confidence            58999999999999999999999999999988876543221  122221    1237889999999988877764     


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHH-HHHHHhhhchhhhHHHHHHH------------hhhccc-----cC------
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAE-FERILSINLVGAFLGRNMLL------------GVCGII-----GG------  145 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~------------s~~~~~-----~~------  145 (257)
                        ++|+|||+|+...     +   ..++ ..+.+++|+.++.++.+...            |..+..     +.      
T Consensus        80 --~~D~Vih~A~~~~-----~---~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E  149 (338)
T 2rh8_A           80 --GCDFVFHVATPVH-----F---ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDE  149 (338)
T ss_dssp             --TCSEEEEESSCCC-----C------------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCT
T ss_pred             --CCCEEEEeCCccC-----C---CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccCh
Confidence              5899999998542     1   1122 24478899999998865431            211111     00      


Q ss_pred             ----------C---CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH----hh-h---hhccccCcc
Q 044485          146 ----------A---ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF----LK-L---ADDGLGGMY  204 (257)
Q Consensus       146 ----------~---~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~----~~-~---~~~~~~~~~  204 (257)
                                +   ....|+.||.+.+.+++.++++   +|+++++++|+.+.+|.....    .. .   ... .....
T Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g-~~~~~  225 (338)
T 2rh8_A          150 KNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITG-NEFLI  225 (338)
T ss_dssp             TTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHT-CHHHH
T ss_pred             hhccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcC-Ccccc
Confidence                      0   0115999999999988877654   489999999999988754211    00 0   000 00000


Q ss_pred             c---c---c--cCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCc
Q 044485          205 S---N---L--KGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG  242 (257)
Q Consensus       205 ~---~---~--~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG  242 (257)
                      .   .   .  ...++.++|+|++++++++...  ..|. +++.++
T Consensus       226 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~-~~~~~~  268 (338)
T 2rh8_A          226 NGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKES--ASGR-YICCAA  268 (338)
T ss_dssp             HHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTT--CCEE-EEECSE
T ss_pred             ccccccccccCcccEEEHHHHHHHHHHHHcCCC--cCCc-EEEecC
Confidence            0   0   0  0037899999999999886532  3454 444433

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.75  E-value=3.8e-18  Score=142.61  Aligned_cols=194  Identities=14%  Similarity=0.086  Sum_probs=135.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      ++|||||+|+||++++++|+ +|++|++++|+..                    .+.+|++|++++.++++..     ++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~--------------------~~~~D~~d~~~~~~~~~~~-----~~   55 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK--------------------EFCGDFSNPKGVAETVRKL-----RP   55 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS--------------------SSCCCTTCHHHHHHHHHHH-----CC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc--------------------cccccCCCHHHHHHHHHhc-----CC
Confidence            69999999999999999999 8999999998751                    2458999999998887754     69


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccccC------------CCCchhh
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGIIGG------------AATHAYT  152 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~~~------------~~~~~y~  152 (257)
                      |+|||+|+....      ..+.+++...+++|+.++.++...+.         |..+..+.            .+...|+
T Consensus        56 d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~  129 (299)
T 1n2s_A           56 DVIVNAAAHTAV------DKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYG  129 (299)
T ss_dssp             SEEEECCCCCCH------HHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHH
T ss_pred             CEEEECcccCCH------hhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCCCCCCCCCCCCCCccHHH
Confidence            999999996431      01123457788999999998876652         22222211            1245899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH----hhhh-hccccCccccccCCCCCHHHHHHHHHHhcCC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF----LKLA-DDGLGGMYSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      .+|.+.+.+++.++.       +++.++|+.+.++.....    .... ....-.........++.++|+|+++++++..
T Consensus       130 ~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  202 (299)
T 1n2s_A          130 KTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRV  202 (299)
T ss_dssp             HHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHH
Confidence            999999999987642       788999999987643211    1110 0000001111224567899999999999865


Q ss_pred             CCCcc-cccEEEecCceeee
Q 044485          228 ESKCV-SGHNLVVDGGFAIV  246 (257)
Q Consensus       228 ~~~~~-~G~~~~~dgG~~~~  246 (257)
                      ..... .|+.+++.+|..++
T Consensus       203 ~~~~~~~~~~~~i~~~~~~s  222 (299)
T 1n2s_A          203 ALNKPEVAGLYHLVAGGTTT  222 (299)
T ss_dssp             HHHCGGGCEEEECCCBSCEE
T ss_pred             hccccccCceEEEeCCCCCC
Confidence            42123 58899999987554

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.75  E-value=7.7e-19  Score=146.10  Aligned_cols=195  Identities=16%  Similarity=0.087  Sum_probs=136.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      ++++|||| +|+||++++++|+++|++|++++|+.+.+.             ..+.++.+|++|+++++++++      +
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------------~~~~~~~~Dl~d~~~~~~~~~------~   62 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMP-------------AGVQTLIADVTRPDTLASIVH------L   62 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCC-------------TTCCEEECCTTCGGGCTTGGG------G
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccc-------------cCCceEEccCCChHHHHHhhc------C
Confidence            47899999 599999999999999999999999876421             237889999999998887665      3


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC------------CCCc
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG------------AATH  149 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~------------~~~~  149 (257)
                      ++|+|||+|+...           .+....+++|+.++..+...+.          |..+.++.            .+..
T Consensus        63 ~~d~vih~a~~~~-----------~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~  131 (286)
T 3gpi_A           63 RPEILVYCVAASE-----------YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKD  131 (286)
T ss_dssp             CCSEEEECHHHHH-----------HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCS
T ss_pred             CCCEEEEeCCCCC-----------CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCC
Confidence            6999999998532           3346677888888888766551          22222221            2245


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      .|+.+|.+.+.+ +..        ++++.++|+.+.++....+..................++.++|+|+++++++....
T Consensus       132 ~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  202 (286)
T 3gpi_A          132 FSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRS  202 (286)
T ss_dssp             HHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHT
T ss_pred             hhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhc
Confidence            899999999988 542        88999999999877654332211110000012223356789999999999987643


Q ss_pred             CcccccEEEecCceeee
Q 044485          230 KCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~~  246 (257)
                      ....|+.+++.+|..++
T Consensus       203 ~~~~~~~~~~~~~~~~s  219 (286)
T 3gpi_A          203 HAVPERLYIVTDNQPLP  219 (286)
T ss_dssp             TSCCCSEEEECCSCCEE
T ss_pred             cCCCCceEEEeCCCCCC
Confidence            23568999999887655

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.74  E-value=5.1e-18  Score=142.47  Aligned_cols=204  Identities=13%  Similarity=0.056  Sum_probs=137.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+++|++|||||+|+||++++++|.++|+      +....              ...+..+.+|++|++++.++++..  
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~--------------~~~~~~~~~D~~d~~~~~~~~~~~--   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED--------------WVFVSSKDADLTDTAQTRALFEKV--   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE--------------EEECCTTTCCTTSHHHHHHHHHHS--
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc--------------ccccCceecccCCHHHHHHHHhhc--
Confidence            35578999999999999999999999998      11100              011445678999999998888753  


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccC-------------
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGG-------------  145 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~-------------  145 (257)
                         ++|+|||+|+....  .   ..+.++....+++|+.++..+.....          |..+..+.             
T Consensus        61 ---~~d~Vih~A~~~~~--~---~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~  132 (319)
T 4b8w_A           61 ---QPTHVIHLAAMVGG--L---FRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHN  132 (319)
T ss_dssp             ---CCSEEEECCCCCCC--H---HHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGB
T ss_pred             ---CCCEEEECceeccc--c---cccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCcccccccc
Confidence               69999999997431  0   01123356778999999998866551          22222211             


Q ss_pred             ----CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh----------Hhhh-----hhccccCcc--
Q 044485          146 ----AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD----------FLKL-----ADDGLGGMY--  204 (257)
Q Consensus       146 ----~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~----------~~~~-----~~~~~~~~~--  204 (257)
                          +....|+.+|.+.+.+++.++++.   |++++.++|+.+..+....          +...     .....-...  
T Consensus       133 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (319)
T 4b8w_A          133 GPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGT  209 (319)
T ss_dssp             SCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESC
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCC
Confidence                112259999999999999988775   8999999999987765321          1111     000000000  


Q ss_pred             ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          205 SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       205 ~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ......++.++|+|++++.++..... ..|+.+++.+|..++
T Consensus       210 g~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~ni~~~~~~s  250 (319)
T 4b8w_A          210 GNPRRQFIYSLDLAQLFIWVLREYNE-VEPIILSVGEEDEVS  250 (319)
T ss_dssp             SCCEECEEEHHHHHHHHHHHHHHCCC-SSCEEECCCGGGCEE
T ss_pred             CCeeEEEEeHHHHHHHHHHHHhcccc-CCceEEEecCCCcee
Confidence            12223467899999999998865322 467888888876655

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.73  E-value=1.7e-17  Score=138.85  Aligned_cols=195  Identities=18%  Similarity=0.154  Sum_probs=127.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcC-CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           12 GKVALITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|++|||||+|+||++++++|+++| ++|++++|+.+....  +.+...     .+.++.+|++|+++++++++      
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~~-----~~~~~~~D~~d~~~l~~~~~------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRLQ-----GAEVVQGDQDDQVIMELALN------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHHT-----TCEEEECCTTCHHHHHHHHT------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHHC-----CCEEEEecCCCHHHHHHHHh------
Confidence            4799999999999999999999999 999999998765321  122111     27889999999999888765      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------HhhhccccC---CCCchhhhhHHH
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGIIGG---AATHAYTSSKHG  157 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~~~---~~~~~y~~sK~a  157 (257)
                       ++|+||||++....  .     .       .+.|+.+...+....          +|..+..+.   .....|..+|.+
T Consensus        72 -~~d~vi~~a~~~~~--~-----~-------~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~  136 (299)
T 2wm3_A           72 -GAYATFIVTNYWES--C-----S-------QEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGE  136 (299)
T ss_dssp             -TCSEEEECCCHHHH--T-----C-------HHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHH
T ss_pred             -cCCEEEEeCCCCcc--c-----c-------chHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHH
Confidence             59999999985321  0     0       112222333322221          222222211   124679999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhh-hhccccCcc----ccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          158 LLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKL-ADDGLGGMY----SNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       158 ~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      ++.+++.       .|++++.++||++.++....+... .........    ......+++++|+|+.++.++.+.. ..
T Consensus       137 ~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~  208 (299)
T 2wm3_A          137 VEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE-KY  208 (299)
T ss_dssp             HHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHH-HH
T ss_pred             HHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChh-hh
Confidence            9998865       389999999999988764322110 000000000    1112236789999999999987532 24


Q ss_pred             cccEEEecCc
Q 044485          233 SGHNLVVDGG  242 (257)
Q Consensus       233 ~G~~~~~dgG  242 (257)
                      .|+.+++.|.
T Consensus       209 ~g~~~~~~g~  218 (299)
T 2wm3_A          209 VGQNIGLSTC  218 (299)
T ss_dssp             TTCEEECCSE
T ss_pred             CCeEEEeeec
Confidence            7899999863

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.73  E-value=9.8e-18  Score=150.42  Aligned_cols=213  Identities=12%  Similarity=0.025  Sum_probs=143.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh---hHhHHHHhccCC------CCCCCceeEecCCCCHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL---GESVCKDIGSSS------SSASGCSYVHCDVTKEKDIENA   82 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~---~~~~~~~~~~~~------~~~~~v~~~~~D~~~~~~v~~~   82 (257)
                      .|+||||||+|+||.+++++|.+.|++|+++.|+...   .++..+.+....      ....++.++.+|+++++++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            4799999999999999999999999999999998763   222222221110      00134899999999988776  


Q ss_pred             HHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhcc--cc-------
Q 044485           83 VNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGI--IG-------  144 (257)
Q Consensus        83 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~--~~-------  144 (257)
                            ...++|+|||||+....         ...+...+++|+.++..+.....         |..+.  ..       
T Consensus       228 ------~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~vG~~~~~~~~~~  292 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTDH---------FGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFDIDTEDV  292 (508)
T ss_dssp             ------CSSCCSEEEECCCC-----------------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCTTSEECTTCSCC
T ss_pred             ------CccCCCEEEECCceecC---------CCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhhccCCccCCcCc
Confidence                  33589999999997532         23456778889999998876552         22222  00       


Q ss_pred             ----------CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH----------hhhhhccc-cCc
Q 044485          145 ----------GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF----------LKLADDGL-GGM  203 (257)
Q Consensus       145 ----------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~----------~~~~~~~~-~~~  203 (257)
                                ......|+.+|.+.+.+++.++.    +|++++.++||.+.++.....          ........ ...
T Consensus       293 ~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~  368 (508)
T 4f6l_B          293 TFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDC  368 (508)
T ss_dssp             EECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSE
T ss_pred             ccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCC
Confidence                      11346899999999999988653    599999999999877643211          01100000 000


Q ss_pred             c----ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeeec
Q 044485          204 Y----SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA  248 (257)
Q Consensus       204 ~----~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~~  248 (257)
                      .    ......++.++|+|+++++++....   .|+++++.+|..++-.
T Consensus       369 ~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~s~~  414 (508)
T 4f6l_B          369 IGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMPVK  414 (508)
T ss_dssp             EETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEEEHH
T ss_pred             CCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCCCHH
Confidence            1    1122346789999999999997654   7899999998876543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.72  E-value=5.2e-17  Score=135.14  Aligned_cols=194  Identities=11%  Similarity=0.017  Sum_probs=124.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           14 VALITGGARGIGECTARLFSKH-GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      ++|||||+|+||++++++|.+. |++|++++|+.+...+..    .     ..+.++.+|++|+++++++++       +
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~----~-----~~v~~~~~D~~d~~~l~~~~~-------~   65 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW----R-----GKVSVRQLDYFNQESMVEAFK-------G   65 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG----B-----TTBEEEECCTTCHHHHHHHTT-------T
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh----h-----CCCEEEEcCCCCHHHHHHHHh-------C
Confidence            6999999999999999999998 999999999987654321    1     238899999999998887765       6


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh-------hccccCCCCchhhhhHHHHHHHHHHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV-------CGIIGGAATHAYTSSKHGLLGLMKNT  165 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~-------~~~~~~~~~~~y~~sK~a~~~~~~~l  165 (257)
                      +|+||||++....         .       ..|+.++..+.......       .+..+......|..++..     ..+
T Consensus        66 ~d~vi~~a~~~~~---------~-------~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~~~~~~~~~-----~~~  124 (289)
T 3e48_A           66 MDTVVFIPSIIHP---------S-------FKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNPFHMSPYF-----GYA  124 (289)
T ss_dssp             CSEEEECCCCCCS---------H-------HHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTCCSTTHHHH-----HHH
T ss_pred             CCEEEEeCCCCcc---------c-------hhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCCCCccchhH-----HHH
Confidence            9999999986532         0       11333333333222100       011122222334444322     122


Q ss_pred             HHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCcee
Q 044485          166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       166 ~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~  244 (257)
                      ...+...|++++.++||++.++................ .......+++++|+|+++++++.+...  .|+.++++ |..
T Consensus       125 e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~--~g~~~~~~-~~~  201 (289)
T 3e48_A          125 SRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDT--WGKRYLLS-GYS  201 (289)
T ss_dssp             HHHHHHHCCEEEEEEECEESTTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGG--TTCEEEEC-CEE
T ss_pred             HHHHHHcCCCEEEEeccccccccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCc--CCceEEeC-CCc
Confidence            33344569999999999999986543322211110000 011112367899999999999987653  29999999 877


Q ss_pred             eee
Q 044485          245 IVN  247 (257)
Q Consensus       245 ~~~  247 (257)
                      ++-
T Consensus       202 ~s~  204 (289)
T 3e48_A          202 YDM  204 (289)
T ss_dssp             EEH
T ss_pred             CCH
Confidence            664

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.69  E-value=3.3e-16  Score=131.22  Aligned_cols=199  Identities=16%  Similarity=0.207  Sum_probs=124.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-------hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKD-------DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      +++++||||+|+||++++++|+++|++|++++|+.       ++.+.. +++...     .+.++.+|++|++++.++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~~-----~v~~v~~D~~d~~~l~~~~~   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQSL-----GVILLEGDINDHETLVKAIK   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHHT-----TCEEEECCTTCHHHHHHHHT
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHhC-----CCEEEEeCCCCHHHHHHHHh
Confidence            36899999999999999999999999999999986       333322 222221     27889999999998887775


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHH-hhh-chhhhHHHHHHHhhhccc-----c-CCCCchhhhhHH
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL-SIN-LVGAFLGRNMLLGVCGII-----G-GAATHAYTSSKH  156 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~-~~n-~~~~~~l~~~~~s~~~~~-----~-~~~~~~y~~sK~  156 (257)
                             ++|+||||++....      . ....+.+.+ +.+ +.      +.+.|..+..     + .+....| .+|.
T Consensus        76 -------~~d~vi~~a~~~~~------~-~~~~l~~aa~~~g~v~------~~v~S~~g~~~~~~~~~~p~~~~y-~sK~  134 (307)
T 2gas_A           76 -------QVDIVICAAGRLLI------E-DQVKIIKAIKEAGNVK------KFFPSEFGLDVDRHDAVEPVRQVF-EEKA  134 (307)
T ss_dssp             -------TCSEEEECSSSSCG------G-GHHHHHHHHHHHCCCS------EEECSCCSSCTTSCCCCTTHHHHH-HHHH
T ss_pred             -------CCCEEEECCccccc------c-cHHHHHHHHHhcCCce------EEeecccccCcccccCCCcchhHH-HHHH
Confidence                   59999999996420      0 111111111 111 11      1111222211     0 1123468 9999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh-hccccCcc-----ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA-DDGLGGMY-----SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +++.+++.       .|++++.++||++.+++........ ........     ......+++++|+|+.++.++.+.. 
T Consensus       135 ~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-  206 (307)
T 2gas_A          135 SIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPN-  206 (307)
T ss_dssp             HHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGG-
T ss_pred             HHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCcc-
Confidence            99988763       3799999999999886543322110 00000001     1122346789999999999997643 


Q ss_pred             cccccEEEecC-ceeee
Q 044485          231 CVSGHNLVVDG-GFAIV  246 (257)
Q Consensus       231 ~~~G~~~~~dg-G~~~~  246 (257)
                       ..|+.+.+.| |..++
T Consensus       207 -~~~~~~~~~~~~~~~s  222 (307)
T 2gas_A          207 -TLNKAVHIRLPKNYLT  222 (307)
T ss_dssp             -GTTEEEECCCGGGEEE
T ss_pred             -ccCceEEEeCCCCcCC
Confidence             3477777765 34443

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.68  E-value=2.7e-16  Score=132.59  Aligned_cols=199  Identities=14%  Similarity=0.110  Sum_probs=123.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +++|||||+|+||.+++++|+++|++|++++|+.+...+..+++...     .+.++.+|++|++++.++++       +
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~-----~v~~v~~Dl~d~~~l~~a~~-------~   79 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL-----GAIIVKGELDEHEKLVELMK-------K   79 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHT-----TCEEEECCTTCHHHHHHHHT-------T
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcC-----CCEEEEecCCCHHHHHHHHc-------C
Confidence            68999999999999999999999999999999875222222222221     27889999999999888775       5


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHH-hhh-chhhhHHHHHHHhhhcccc---C---CCCchhhhhHHHHHHHHHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERIL-SIN-LVGAFLGRNMLLGVCGIIG---G---AATHAYTSSKHGLLGLMKN  164 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~-~~n-~~~~~~l~~~~~s~~~~~~---~---~~~~~y~~sK~a~~~~~~~  164 (257)
                      +|+|||+++....      .. ...+.+.. +.+ +.-.      +.|..+...   .   +....| .+|.+++.+.+.
T Consensus        80 ~d~vi~~a~~~~~------~~-~~~l~~aa~~~g~v~~~------v~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~  145 (318)
T 2r6j_A           80 VDVVISALAFPQI------LD-QFKILEAIKVAGNIKRF------LPSDFGVEEDRINALPPFEALI-ERKRMIRRAIEE  145 (318)
T ss_dssp             CSEEEECCCGGGS------TT-HHHHHHHHHHHCCCCEE------ECSCCSSCTTTCCCCHHHHHHH-HHHHHHHHHHHH
T ss_pred             CCEEEECCchhhh------HH-HHHHHHHHHhcCCCCEE------EeeccccCcccccCCCCcchhH-HHHHHHHHHHHh
Confidence            9999999986421      11 12222221 111 1111      112222110   0   112368 899999888764


Q ss_pred             HHHHhccCCcEEEeecCCCccChhhHhHhhhh-hccccCcc--ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecC
Q 044485          165 TAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA-DDGLGGMY--SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDG  241 (257)
Q Consensus       165 l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dg  241 (257)
                             .|++++.++||++............ ........  ......++.++|+|+.++.++.+..  ..|+.+.+.|
T Consensus       146 -------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~~~g  216 (318)
T 2r6j_A          146 -------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPR--ALNRVVIYRP  216 (318)
T ss_dssp             -------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGG--GTTEEEECCC
T ss_pred             -------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcc--ccCeEEEecC
Confidence                   5799999999988765443322110 00000001  1112346789999999999987643  2367777764


Q ss_pred             -ceeee
Q 044485          242 -GFAIV  246 (257)
Q Consensus       242 -G~~~~  246 (257)
                       |..++
T Consensus       217 ~~~~~s  222 (318)
T 2r6j_A          217 STNIIT  222 (318)
T ss_dssp             GGGEEE
T ss_pred             CCCccC
Confidence             44444

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.67  E-value=1.7e-15  Score=129.22  Aligned_cols=196  Identities=12%  Similarity=0.093  Sum_probs=125.9

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch----hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD----LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~----~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      +..++||||||||+||++++++|++.|++|++++|+..    ..+. .+.+...     .+.++.+|++|.+++.+++++
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~~~l~~~-----~v~~~~~Dl~d~~~l~~~~~~   81 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKI-FKALEDK-----GAIIVYGLINEQEAMEKILKE   81 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HHHHHHT-----TCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHH-HHHHHhC-----CcEEEEeecCCHHHHHHHHhh
Confidence            34579999999999999999999999999999999862    2221 2222221     388999999999999888865


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------Hhhhccc-----cCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGII-----GGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~-----~~~~~~~  150 (257)
                      .     ++|+|||+++..                     |+.+...+....          .|..+..     +......
T Consensus        82 ~-----~~d~Vi~~a~~~---------------------n~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~e~~~~~p~~~  135 (346)
T 3i6i_A           82 H-----EIDIVVSTVGGE---------------------SILDQIALVKAMKAVGTIKRFLPSEFGHDVNRADPVEPGLN  135 (346)
T ss_dssp             T-----TCCEEEECCCGG---------------------GGGGHHHHHHHHHHHCCCSEEECSCCSSCTTTCCCCTTHHH
T ss_pred             C-----CCCEEEECCchh---------------------hHHHHHHHHHHHHHcCCceEEeecccCCCCCccCcCCCcch
Confidence            3     699999999862                     333333332222          1111111     1123357


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh----hccccCcc--ccccCCCCCHHHHHHHHHHh
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA----DDGLGGMY--SNLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~a~~~~~l  224 (257)
                      |..+|.+.+.+.+.       .|++++.++||++.+..........    ........  ......++.++|+|+.++.+
T Consensus       136 y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~  208 (346)
T 3i6i_A          136 MYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKT  208 (346)
T ss_dssp             HHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHH
Confidence            99999999888765       5899999999988775422211110    00000001  11123467899999999999


Q ss_pred             cCCCCCcccccEEEecC-ceeee
Q 044485          225 GSDESKCVSGHNLVVDG-GFAIV  246 (257)
Q Consensus       225 ~s~~~~~~~G~~~~~dg-G~~~~  246 (257)
                      +.+..  ..|+.+.+.| |..++
T Consensus       209 l~~~~--~~~~~~~i~g~~~~~s  229 (346)
T 3i6i_A          209 VDDVR--TLNKSVHFRPSCNCLN  229 (346)
T ss_dssp             TTCGG--GTTEEEECCCGGGEEC
T ss_pred             HhCcc--ccCeEEEEeCCCCCCC
Confidence            97652  3466777754 44443

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.66  E-value=2.3e-16  Score=130.93  Aligned_cols=195  Identities=13%  Similarity=0.044  Sum_probs=127.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +++||||| |.||++++++|.++|++|++++|+.+..+....         ..+.++.+|++|.+            ..+
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~D~~d~~------------~~~   63 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA---------SGAEPLLWPGEEPS------------LDG   63 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH---------TTEEEEESSSSCCC------------CTT
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh---------CCCeEEEecccccc------------cCC
Confidence            68999998 999999999999999999999999876654432         12889999999833            357


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHH-HHHhhhccccC------------CCCchhhhhHHHHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRN-MLLGVCGIIGG------------AATHAYTSSKHGLL  159 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~-~~~s~~~~~~~------------~~~~~y~~sK~a~~  159 (257)
                      +|+|||+|+.....     +...+.+.+.+...-   ..+.+ .+.|..+..+.            .+...|+.+|.+.+
T Consensus        64 ~d~vi~~a~~~~~~-----~~~~~~l~~a~~~~~---~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E  135 (286)
T 3ius_A           64 VTHLLISTAPDSGG-----DPVLAALGDQIAARA---AQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAE  135 (286)
T ss_dssp             CCEEEECCCCBTTB-----CHHHHHHHHHHHHTG---GGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHH
T ss_pred             CCEEEECCCccccc-----cHHHHHHHHHHHhhc---CCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHH
Confidence            99999999965431     100111222211100   00000 11222222221            22347999999999


Q ss_pred             HHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEE
Q 044485          160 GLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLV  238 (257)
Q Consensus       160 ~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~  238 (257)
                      .+++.+      .|++++.++|+.+.++................. ......++..+|+|++++.++....   .|+.++
T Consensus       136 ~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~  206 (286)
T 3ius_A          136 QQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPD---PGAVYN  206 (286)
T ss_dssp             HHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCC---TTCEEE
T ss_pred             HHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCC---CCCEEE
Confidence            998876      589999999999988754322111111000000 1122346788999999999997754   688999


Q ss_pred             ecCceeee
Q 044485          239 VDGGFAIV  246 (257)
Q Consensus       239 ~dgG~~~~  246 (257)
                      +.+|..++
T Consensus       207 i~~~~~~s  214 (286)
T 3ius_A          207 VCDDEPVP  214 (286)
T ss_dssp             ECCSCCBC
T ss_pred             EeCCCCcc
Confidence            99887654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.66  E-value=2.3e-16  Score=133.17  Aligned_cols=200  Identities=13%  Similarity=0.106  Sum_probs=124.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-h----hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKD-D----LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~----~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++++||||+|+||++++++|+++|++|++++|+. .    ...+..+++...     .+.++.+|++|++++.++++   
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~-----~v~~v~~D~~d~~~l~~a~~---   76 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSM-----GVTIIEGEMEEHEKMVSVLK---   76 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHT-----TCEEEECCTTCHHHHHHHHT---
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcC-----CcEEEEecCCCHHHHHHHHc---
Confidence            6799999999999999999999999999999986 2    111222222211     27899999999999888775   


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhh-chhhhHHHHHHHhhhcccc---C---CCCchhhhhHHHHHH
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN-LVGAFLGRNMLLGVCGIIG---G---AATHAYTSSKHGLLG  160 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n-~~~~~~l~~~~~s~~~~~~---~---~~~~~y~~sK~a~~~  160 (257)
                          ++|+||||++...      ......-++.+.+.+ +.-.      +.|..+...   .   +....| .+|.+++.
T Consensus        77 ----~~d~vi~~a~~~~------~~~~~~l~~aa~~~g~v~~~------v~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~  139 (321)
T 3c1o_A           77 ----QVDIVISALPFPM------ISSQIHIINAIKAAGNIKRF------LPSDFGCEEDRIKPLPPFESVL-EKKRIIRR  139 (321)
T ss_dssp             ----TCSEEEECCCGGG------SGGGHHHHHHHHHHCCCCEE------ECSCCSSCGGGCCCCHHHHHHH-HHHHHHHH
T ss_pred             ----CCCEEEECCCccc------hhhHHHHHHHHHHhCCccEE------eccccccCccccccCCCcchHH-HHHHHHHH
Confidence                5999999998642      011111111121111 1111      112222100   1   113468 99999998


Q ss_pred             HHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh-hccccCc---c--ccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          161 LMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA-DDGLGGM---Y--SNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       161 ~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~~~---~--~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      +++.       .|++++.++||++.++......... .......   .  ......++.++|+|++++.++.+..  ..|
T Consensus       140 ~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--~~g  210 (321)
T 3c1o_A          140 AIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPR--CCN  210 (321)
T ss_dssp             HHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGG--GTT
T ss_pred             HHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCcc--ccC
Confidence            8863       3788999999998776543322110 0000000   1  1122346789999999999987643  347


Q ss_pred             cEEEecC-ceeee
Q 044485          235 HNLVVDG-GFAIV  246 (257)
Q Consensus       235 ~~~~~dg-G~~~~  246 (257)
                      +.+.+.| |..++
T Consensus       211 ~~~~~~g~~~~~t  223 (321)
T 3c1o_A          211 RIVIYRPPKNIIS  223 (321)
T ss_dssp             EEEECCCGGGEEE
T ss_pred             eEEEEeCCCCccc
Confidence            8888876 45544

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.65  E-value=1.6e-16  Score=136.08  Aligned_cols=201  Identities=12%  Similarity=0.084  Sum_probs=125.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecC-CCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD-VTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D-~~~~~~v~~~~~~~~~~   89 (257)
                      .+|+++||||+|+||++++++|+++|++|++++|+.+...  .+.+...    ..+.++.+| ++|++++.++++     
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~----~~v~~v~~D~l~d~~~l~~~~~-----   72 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAI----PNVTLFQGPLLNNVPLMDTLFE-----   72 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHTS----TTEEEEESCCTTCHHHHHHHHT-----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhhc----CCcEEEECCccCCHHHHHHHHh-----
Confidence            4688999999999999999999999999999999876541  1222211    127889999 999999888765     


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHH---HHH--Hhhh--ccccCCCCchhhhhHHHHHHHH
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGR---NML--LGVC--GIIGGAATHAYTSSKHGLLGLM  162 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~---~~~--~s~~--~~~~~~~~~~y~~sK~a~~~~~  162 (257)
                        .+|+||||++....        ..    .....|+.-...-.   ..+  +|..  ...+......|..+|.+.+.++
T Consensus        73 --~~d~Vi~~a~~~~~--------~~----~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~  138 (352)
T 1xgk_A           73 --GAHLAFINTTSQAG--------DE----IAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYV  138 (352)
T ss_dssp             --TCSEEEECCCSTTS--------CH----HHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHH
T ss_pred             --cCCEEEEcCCCCCc--------HH----HHHHHHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHH
Confidence              58999999875311        00    00001111110000   011  1221  1233344568999999999998


Q ss_pred             HHHHHHhccCCcEEEeecCCCccChhhHhHhhhh--hccccCc-----c--ccccCCCCCH-HHHHHHHHHhcCCCCCcc
Q 044485          163 KNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA--DDGLGGM-----Y--SNLKGAVLEP-EDAAEAALYLGSDESKCV  232 (257)
Q Consensus       163 ~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~--~~~~~~~-----~--~~~~~~~~~~-~~~a~~~~~l~s~~~~~~  232 (257)
                      +.       .|++++.|+||++.+..........  .......     .  ......++++ +|+|++++.++.+.....
T Consensus       139 ~~-------~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~  211 (352)
T 1xgk_A          139 RQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKW  211 (352)
T ss_dssp             HT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHH
T ss_pred             HH-------cCCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhh
Confidence            76       2899999999987554321100000  0000000     0  1111235678 899999999987643345


Q ss_pred             cccEEEecCce
Q 044485          233 SGHNLVVDGGF  243 (257)
Q Consensus       233 ~G~~~~~dgG~  243 (257)
                      .|+.+++.++.
T Consensus       212 ~g~~~~l~~~~  222 (352)
T 1xgk_A          212 NGHRIALTFET  222 (352)
T ss_dssp             TTCEEEECSEE
T ss_pred             CCeEEEEecCC
Confidence            78999998653

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.65  E-value=1.9e-15  Score=126.94  Aligned_cols=202  Identities=12%  Similarity=0.123  Sum_probs=123.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch-----hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDD-----LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-----~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++++||||||+||++++++|+++|++|++++|+..     ..+. .+.+..     ..+.++.+|++|++++.++++   
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~-----~~~~~~~~D~~d~~~l~~~~~---   75 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFKQ-----LGAKLIEASLDDHQRLVDALK---   75 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHHT-----TTCEEECCCSSCHHHHHHHHT---
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHHh-----CCeEEEeCCCCCHHHHHHHHh---
Confidence            68999999999999999999999999999999853     2222 222221     127889999999998887765   


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHH-hhh-chhhhHHHHHHHhhhccc------c-CCCCchhhhhHHHH
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL-SIN-LVGAFLGRNMLLGVCGII------G-GAATHAYTSSKHGL  158 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~-~~n-~~~~~~l~~~~~s~~~~~------~-~~~~~~y~~sK~a~  158 (257)
                          ++|+|||+++....  .. .......+.+.. +.+ +.-      .+.|..+..      + .+....| .+|.++
T Consensus        76 ----~~d~vi~~a~~~~~--~~-~~~~~~~l~~aa~~~g~v~~------~v~S~~g~~~~~~~~~~~p~~~~y-~sK~~~  141 (313)
T 1qyd_A           76 ----QVDVVISALAGGVL--SH-HILEQLKLVEAIKEAGNIKR------FLPSEFGMDPDIMEHALQPGSITF-IDKRKV  141 (313)
T ss_dssp             ----TCSEEEECCCCSSS--ST-TTTTHHHHHHHHHHSCCCSE------EECSCCSSCTTSCCCCCSSTTHHH-HHHHHH
T ss_pred             ----CCCEEEECCccccc--hh-hHHHHHHHHHHHHhcCCCce------EEecCCcCCccccccCCCCCcchH-HHHHHH
Confidence                59999999997532  11 011111122211 111 111      111222211      1 1224568 999999


Q ss_pred             HHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh--hccccC---cc--ccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          159 LGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA--DDGLGG---MY--SNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       159 ~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~--~~~~~~---~~--~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      +.+.+.       .|++++.++||++.++.........  ......   ..  ......++.++|+|+.++.++.+..  
T Consensus       142 e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--  212 (313)
T 1qyd_A          142 RRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ--  212 (313)
T ss_dssp             HHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG--
T ss_pred             HHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcc--
Confidence            888753       5899999999988765433221110  000000   11  1112236789999999999987643  


Q ss_pred             ccccEEEecC-ceeee
Q 044485          232 VSGHNLVVDG-GFAIV  246 (257)
Q Consensus       232 ~~G~~~~~dg-G~~~~  246 (257)
                      ..|+.+.+.| |..++
T Consensus       213 ~~~~~~~~~g~~~~~s  228 (313)
T 1qyd_A          213 TLNKTMYIRPPMNILS  228 (313)
T ss_dssp             GSSSEEECCCGGGEEE
T ss_pred             cCCceEEEeCCCCccC
Confidence            3477777765 34443

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.64  E-value=9.3e-16  Score=132.02  Aligned_cols=186  Identities=16%  Similarity=0.052  Sum_probs=128.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      ++||||||+|+||++++++|+++|+ +|+..+|+                            +|+++++++++       
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------------~d~~~l~~~~~-------   45 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------------TKEEELESALL-------   45 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------------CCHHHHHHHHH-------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------------CCHHHHHHHhc-------
Confidence            3799999999999999999999998 77766554                            57888887776       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh--------ccccCCCCchhhhhHHHHHHHHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC--------GIIGGAATHAYTSSKHGLLGLMK  163 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~--------~~~~~~~~~~y~~sK~a~~~~~~  163 (257)
                      ++|+|||+|+.....          +....+++|+.++..+...+....        +.........|+.+|.+.+.+++
T Consensus        46 ~~d~Vih~a~~~~~~----------~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~~~~Y~~sK~~~E~~~~  115 (369)
T 3st7_A           46 KADFIVHLAGVNRPE----------HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDNPYGESKLQGEQLLR  115 (369)
T ss_dssp             HCSEEEECCCSBCTT----------CSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGSCSHHHHHHHHHHHHHH
T ss_pred             cCCEEEECCcCCCCC----------CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcCCCCchHHHHHHHHHHH
Confidence            499999999976431          234466788888888766552110        00111126789999999999999


Q ss_pred             HHHHHhccCCcEEEeecCCCccChhhHh--------HhhhhhccccCcc--ccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          164 NTAVELGRFGIRVNCVSPYAVSTPLAKD--------FLKLADDGLGGMY--SNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       164 ~l~~e~~~~gi~v~~i~pg~v~t~~~~~--------~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      .++++.   |++++.++|+.+..+....        +............  ......++.++|+|++++.++..... ..
T Consensus       116 ~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-~~  191 (369)
T 3st7_A          116 EYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPT-IE  191 (369)
T ss_dssp             HHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCC-EE
T ss_pred             HHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcc-cC
Confidence            988874   7899999999887764321        1111000000000  11122467899999999999876532 24


Q ss_pred             ccEEEecCceeeee
Q 044485          234 GHNLVVDGGFAIVN  247 (257)
Q Consensus       234 G~~~~~dgG~~~~~  247 (257)
                      |+.+++.+|..++-
T Consensus       192 ~~~~~i~~~~~~s~  205 (369)
T 3st7_A          192 NGVPTVPNVFKVTL  205 (369)
T ss_dssp             TTEECCSCCEEEEH
T ss_pred             CceEEeCCCCceeH
Confidence            89999998876653

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.60  E-value=3.1e-14  Score=121.97  Aligned_cols=201  Identities=14%  Similarity=0.090  Sum_probs=129.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcC-----CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHG-----AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g-----~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +|++|||||+|+||++++++|+++|     ++|++++|+.....     ..     ..++.++.+|++|++++.++++..
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~~-----~~~~~~~~~Dl~d~~~~~~~~~~~   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----HE-----DNPINYVQCDISDPDDSQAKLSPL   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----CC-----SSCCEEEECCTTSHHHHHHHHTTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----cc-----cCceEEEEeecCCHHHHHHHHhcC
Confidence            4789999999999999999999999     99999999876432     11     123788999999999887776532


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------------hhhccccC--
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------------GVCGIIGG--  145 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------------s~~~~~~~--  145 (257)
                          +.+|+|||+|+...           ++....+++|+.++..+.....                   |..+..+.  
T Consensus        71 ----~~~d~vih~a~~~~-----------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~  135 (364)
T 2v6g_A           71 ----TDVTHVFYVTWANR-----------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIE  135 (364)
T ss_dssp             ----TTCCEEEECCCCCC-----------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSC
T ss_pred             ----CCCCEEEECCCCCc-----------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccc
Confidence                24999999999642           1256788899999888754432                   22222211  


Q ss_pred             -------------CCCchhhhhHHHHHHHHHHHHHHhccCC-cEEEeecCCCccChhhHhH---------hhhh---hcc
Q 044485          146 -------------AATHAYTSSKHGLLGLMKNTAVELGRFG-IRVNCVSPYAVSTPLAKDF---------LKLA---DDG  199 (257)
Q Consensus       146 -------------~~~~~y~~sK~a~~~~~~~l~~e~~~~g-i~v~~i~pg~v~t~~~~~~---------~~~~---~~~  199 (257)
                                   +....|    .+.+.+++.++.   .+| ++++.++|+.+..+.....         ....   ...
T Consensus       136 ~~~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~  208 (364)
T 2v6g_A          136 SHDPPYTEDLPRLKYMNFY----YDLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGK  208 (364)
T ss_dssp             CCCSSBCTTSCCCSSCCHH----HHHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTC
T ss_pred             cCCCCCCccccCCccchhh----HHHHHHHHHHhh---cCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCC
Confidence                         112245    234444444432   245 9999999999887543210         1101   000


Q ss_pred             ccCccc-----cccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          200 LGGMYS-----NLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       200 ~~~~~~-----~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .-....     ...-.+.+.+|+|++++.++....  ..|+.+++.+|..++
T Consensus       209 ~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--~~g~~~ni~~~~~~s  258 (364)
T 2v6g_A          209 VLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPY--AKNEAFNVSNGDVFK  258 (364)
T ss_dssp             CBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGG--GTTEEEEECCSCCBC
T ss_pred             ceecCCCcccccccCCCCcHHHHHHHHHHHHhCCC--CCCceEEecCCCcCC
Confidence            000011     111234456999999998886532  468999998886544

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.60  E-value=7.6e-15  Score=122.98  Aligned_cols=200  Identities=14%  Similarity=0.170  Sum_probs=121.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhh-----HhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG-----ESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~-----~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++++||||+|+||++++++|+++|++|++++|+....     .+..+.+...     .+.++.+|++|++++.++++   
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~-----~v~~v~~D~~d~~~l~~~~~---   76 (308)
T 1qyc_A            5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKAS-----GANIVHGSIDDHASLVEAVK---   76 (308)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTT-----TCEEECCCTTCHHHHHHHHH---
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhC-----CCEEEEeccCCHHHHHHHHc---
Confidence            6899999999999999999999999999999985321     1111222221     27889999999999888776   


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhh-chhhhHHHHHHHhhhcccc------CCCCchhhhhHHHHHH
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN-LVGAFLGRNMLLGVCGIIG------GAATHAYTSSKHGLLG  160 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n-~~~~~~l~~~~~s~~~~~~------~~~~~~y~~sK~a~~~  160 (257)
                          ++|+|||+++....      .....-++.+.+.+ +.-      .+.|..+...      .+....| .+|.+++.
T Consensus        77 ----~~d~vi~~a~~~~~------~~~~~l~~aa~~~g~v~~------~v~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~  139 (308)
T 1qyc_A           77 ----NVDVVISTVGSLQI------ESQVNIIKAIKEVGTVKR------FFPSEFGNDVDNVHAVEPAKSVF-EVKAKVRR  139 (308)
T ss_dssp             ----TCSEEEECCCGGGS------GGGHHHHHHHHHHCCCSE------EECSCCSSCTTSCCCCTTHHHHH-HHHHHHHH
T ss_pred             ----CCCEEEECCcchhh------hhHHHHHHHHHhcCCCce------EeecccccCccccccCCcchhHH-HHHHHHHH
Confidence                59999999986421      11111111111111 111      1112222111      1113468 99999988


Q ss_pred             HHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh-hccccCc---c--ccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          161 LMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA-DDGLGGM---Y--SNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       161 ~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~~~---~--~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      +.+.       .|++++.++||++.++......... .......   .  ......++.++|+|+.++.++.+..  ..|
T Consensus       140 ~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--~~~  210 (308)
T 1qyc_A          140 AIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR--TLN  210 (308)
T ss_dssp             HHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG--GTT
T ss_pred             HHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCcc--ccC
Confidence            8764       3788999999988765432221110 0000000   0  1112236789999999999987642  346


Q ss_pred             cEEEecC-ceeee
Q 044485          235 HNLVVDG-GFAIV  246 (257)
Q Consensus       235 ~~~~~dg-G~~~~  246 (257)
                      +.+.+.| |..++
T Consensus       211 ~~~~~~g~~~~~s  223 (308)
T 1qyc_A          211 KTLYLRLPANTLS  223 (308)
T ss_dssp             EEEECCCGGGEEE
T ss_pred             eEEEEeCCCCccC
Confidence            7777765 34443

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.56  E-value=2.8e-14  Score=128.14  Aligned_cols=198  Identities=14%  Similarity=0.063  Sum_probs=128.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +++||||||+|+||.++++.|+++|++|++++|+....                 ..+.+|+.+..         .+.+.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-----------------~~v~~d~~~~~---------~~~l~  200 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-----------------GKRFWDPLNPA---------SDLLD  200 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-----------------TCEECCTTSCC---------TTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-----------------cceeecccchh---------HHhcC
Confidence            57999999999999999999999999999999987542                 12456765431         12234


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------Hhhhcccc------------CCCC
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------LGVCGIIG------------GAAT  148 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------~s~~~~~~------------~~~~  148 (257)
                      ++|+|||+|+....  .   ..+.+.....+++|+.++..+...+           +|..+.++            ....
T Consensus       201 ~~D~Vih~A~~~~~--~---~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~  275 (516)
T 3oh8_A          201 GADVLVHLAGEPIF--G---RFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGD  275 (516)
T ss_dssp             TCSEEEECCCC----------CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCS
T ss_pred             CCCEEEECCCCccc--c---ccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCc
Confidence            79999999997532  1   3344567888999999999987763           12222222            0123


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc---ccCcc--ccccCCCCCHHHHHHHHHH
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG---LGGMY--SNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~a~~~~~  223 (257)
                      ..|+.+|...+.+.+    +....|+++++++||.+.++............   .....  ......++.++|+|++++.
T Consensus       276 ~~y~~~~~~~E~~~~----~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~  351 (516)
T 3oh8_A          276 DFLAEVCRDWEHATA----PASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYR  351 (516)
T ss_dssp             SHHHHHHHHHHHTTH----HHHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHH----HHHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHH
Confidence            357777777665543    23456999999999999886532111111111   11111  1122346789999999999


Q ss_pred             hcCCCCCcccccEEEecCceeeee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      ++....  ..| .+++.++..++.
T Consensus       352 ~l~~~~--~~g-~~ni~~~~~~s~  372 (516)
T 3oh8_A          352 AIVDAQ--ISG-PINAVAPNPVSN  372 (516)
T ss_dssp             HHHCTT--CCE-EEEESCSCCEEH
T ss_pred             HHhCcc--cCC-cEEEECCCCCCH
Confidence            987643  344 677777765543

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.43  E-value=3.5e-12  Score=106.34  Aligned_cols=195  Identities=18%  Similarity=0.082  Sum_probs=119.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      +||||||||.||++++++|.++|++|+++.|++...               ++   ..|     .+      ..+....+
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~---------------~~---~~~-----~~------~~~~l~~~   52 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG---------------RI---TWD-----EL------AASGLPSC   52 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------EE---EHH-----HH------HHHCCCSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC---------------ee---ecc-----hh------hHhhccCC
Confidence            699999999999999999999999999999975321               01   111     10      01234579


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH------------HhhhccccCC------------CCc
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML------------LGVCGIIGGA------------ATH  149 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~------------~s~~~~~~~~------------~~~  149 (257)
                      |.+||+|+....  ......+.+.....++.|+.++..+....            +|..+..+..            ...
T Consensus        53 d~vihla~~~i~--~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~  130 (298)
T 4b4o_A           53 DAAVNLAGENIL--NPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFD  130 (298)
T ss_dssp             SEEEECCCCCSS--CTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSS
T ss_pred             CEEEEeccCccc--chhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccc
Confidence            999999985432  33344566777788889998888775544            1222222211            112


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH---hhhhhccccCcc--ccccCCCCCHHHHHHHHHHh
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF---LKLADDGLGGMY--SNLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~l  224 (257)
                      .|+..|..-+.     .......++++..+.|+.+..+.....   ............  ......++..+|+++++.++
T Consensus       131 ~~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~  205 (298)
T 4b4o_A          131 FFSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHA  205 (298)
T ss_dssp             HHHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHH
T ss_pred             hhHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHH
Confidence            34433333322     123456789999999999887643221   111111111111  22223467899999999998


Q ss_pred             cCCCCCcccccEEEecCceeeee
Q 044485          225 GSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       225 ~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      +.+..  ..| .+++.++..++.
T Consensus       206 ~~~~~--~~g-~yn~~~~~~~t~  225 (298)
T 4b4o_A          206 LEANH--VHG-VLNGVAPSSATN  225 (298)
T ss_dssp             HHCTT--CCE-EEEESCSCCCBH
T ss_pred             HhCCC--CCC-eEEEECCCccCH
Confidence            86543  345 788888776553

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.43  E-value=2.3e-14  Score=119.34  Aligned_cols=110  Identities=16%  Similarity=0.232  Sum_probs=84.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.+|++|||||+||+|+++++.|+++|++|++++|+.++.+++.+++....    .+.++.+|++++++++++++    
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF----KVNVTAAETADDASRAEAVK----  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH----TCCCEEEECCSHHHHHHHTT----
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEecCCCHHHHHHHHH----
Confidence            5789999999999999999999999999999999999888887777664321    25678899999998877665    


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCH-HHHHHHHhhhchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQ-AEFERILSINLVGAF  130 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  130 (257)
                         .+|+||||+|..... .++.+.+. +.+...+++|+.+++
T Consensus       188 ---~~DvlVn~ag~g~~~-~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 ---GAHFVFTAGAIGLEL-LPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             ---TCSEEEECCCTTCCS-BCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             ---hCCEEEECCCccccC-CChhHcCchHHHHHHHHhhhhhhH
Confidence               489999999864221 11212222 444567889998887

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.17  E-value=2.3e-11  Score=96.72  Aligned_cols=79  Identities=18%  Similarity=0.159  Sum_probs=61.4

Q ss_pred             ccCCcEEEEecC----------------CCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecC
Q 044485            9 RLQGKVALITGG----------------ARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD   72 (257)
Q Consensus         9 ~~~~k~~lItGa----------------s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D   72 (257)
                      ++.||++|||||                |||+|.++|++|+++|++|++++++.. ++     .    +.+  +  -.+|
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~----~~g--~--~~~d   70 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----T----PPF--V--KRVD   70 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----C----CTT--E--EEEE
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----c----CCC--C--eEEc
Confidence            578999999999                699999999999999999999987652 11     0    111  2  2467


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEeCCCCCC
Q 044485           73 VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        73 ~~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~  104 (257)
                      +++.+   ++++.+.+.++++|++|||||+..
T Consensus        71 v~~~~---~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           71 VMTAL---EMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             CCSHH---HHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             cCcHH---HHHHHHHHhcCCCCEEEECCcccC
Confidence            77654   456777788889999999999764

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.00  E-value=1.7e-09  Score=77.07  Aligned_cols=73  Identities=19%  Similarity=0.221  Sum_probs=61.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcC-CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           12 GKVALITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      +++++|+|+ |++|.++++.|.+.| ++|++++|+++..+...+         ..+.++.+|+++.+++.++++      
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~------   68 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR---------MGVATKQVDAKDEAGLAKALG------   68 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT---------TTCEEEECCTTCHHHHHHHTT------
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh---------CCCcEEEecCCCHHHHHHHHc------
Confidence            478999999 999999999999999 889999999877665541         126788999999988777653      


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                       ++|++|++++
T Consensus        69 -~~d~vi~~~~   78 (118)
T 3ic5_A           69 -GFDAVISAAP   78 (118)
T ss_dssp             -TCSEEEECSC
T ss_pred             -CCCEEEECCC
Confidence             6999999996

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.00  E-value=3.1e-10  Score=90.34  Aligned_cols=92  Identities=11%  Similarity=0.184  Sum_probs=64.3

Q ss_pred             CCcEEEEecC----------------CCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCC
Q 044485           11 QGKVALITGG----------------ARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT   74 (257)
Q Consensus        11 ~~k~~lItGa----------------s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~   74 (257)
                      .||++|||||                ||++|.++|++|+++|++|++++|......        ..+.  .+     |+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------~~~~--~~-----~~~   66 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------EPHP--NL-----SIR   66 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------CCCT--TE-----EEE
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cCCC--Ce-----EEE
Confidence            4899999999                888999999999999999999998753210        0011  13     223


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHH
Q 044485           75 KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFE  119 (257)
Q Consensus        75 ~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~  119 (257)
                      +.++++++++.+.+.++++|++|+||++...  .+....+.+.+.
T Consensus        67 ~v~s~~em~~~v~~~~~~~Dili~aAAvsD~--~p~~~~~~e~~~  109 (232)
T 2gk4_A           67 EITNTKDLLIEMQERVQDYQVLIHSMAVSDY--TPVYMTGLEEVQ  109 (232)
T ss_dssp             ECCSHHHHHHHHHHHGGGCSEEEECSBCCSE--EEEEEEEHHHHH
T ss_pred             EHhHHHHHHHHHHHhcCCCCEEEEcCccccc--cchhhcchhhhh
Confidence            3346667777888888899999999997643  333333444443

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.93  E-value=1.7e-09  Score=91.42  Aligned_cols=147  Identities=13%  Similarity=0.043  Sum_probs=92.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-------eEEEeeCcc--hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGA-------KVLIADIKD--DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      ++++||||+|.||.+++..|+++|.       +|+++++..  +..+.....+....     +.++ .|+.+.+++.+.+
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~-----~~~~-~di~~~~~~~~a~   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA-----FPLL-AGLEATDDPKVAF   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT-----CTTE-EEEEEESCHHHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccc-----cccc-CCeEeccChHHHh
Confidence            5799999999999999999999996       799998874  22222222332111     1222 4666554444333


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh--------------------ccc
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC--------------------GII  143 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~--------------------~~~  143 (257)
                             .+.|+|||.||....   +  ..+   ..+.++.|+.++..+...+....                    ...
T Consensus        79 -------~~~D~Vih~Ag~~~~---~--~~~---~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~  143 (327)
T 1y7t_A           79 -------KDADYALLVGAAPRK---A--GME---RRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKN  143 (327)
T ss_dssp             -------TTCSEEEECCCCCCC---T--TCC---HHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHT
T ss_pred             -------CCCCEEEECCCcCCC---C--CCC---HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHH
Confidence                   369999999997542   1  122   34567888888877644432110                    001


Q ss_pred             --cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCC
Q 044485          144 --GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYA  183 (257)
Q Consensus       144 --~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~  183 (257)
                        +.++...|+.+|..-+.+.+.+++.+   |+.+..++|..
T Consensus       144 ~~~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~  182 (327)
T 1y7t_A          144 APGLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMT  182 (327)
T ss_dssp             CTTSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCE
T ss_pred             cCCCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeE
Confidence              13344569999999999998888765   44444444443

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.87  E-value=1.8e-09  Score=81.55  Aligned_cols=78  Identities=18%  Similarity=0.216  Sum_probs=62.3

Q ss_pred             CchHHHHHHHHHHcCCeEEEeeCcchhhH---hHHHHhccCCCCCCCceeEecCCCCH--HHHHHHHHHHHHHcCCccEE
Q 044485           22 RGIGECTARLFSKHGAKVLIADIKDDLGE---SVCKDIGSSSSSASGCSYVHCDVTKE--KDIENAVNTAVTQYGKLDIM   96 (257)
Q Consensus        22 ~giG~~ia~~l~~~g~~Vi~~~r~~~~~~---~~~~~~~~~~~~~~~v~~~~~D~~~~--~~v~~~~~~~~~~~~~id~l   96 (257)
                      +.++.++++.|+++|++|++..|+....+   +..+.+...+   .++..+++|++++  ++++++++.+.+.+|+ |+|
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G---~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVL  101 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAG---MDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVL  101 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTT---CEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcC---CeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEE
Confidence            46889999999999999999988765432   2344443333   3477889999999  9999999999998999 999


Q ss_pred             EeCCCCC
Q 044485           97 FNNAGTV  103 (257)
Q Consensus        97 v~~ag~~  103 (257)
                      |||||+.
T Consensus       102 VnnAgg~  108 (157)
T 3gxh_A          102 VHCLANY  108 (157)
T ss_dssp             EECSBSH
T ss_pred             EECCCCC
Confidence            9999964

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.83  E-value=2e-08  Score=87.30  Aligned_cols=82  Identities=16%  Similarity=0.212  Sum_probs=69.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcC---CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHG---AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g---~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ++++|+|+ |++|+++++.|++.|   ..|++++|+.++++++.+++....+  .++..+.+|++|.+++++++++.   
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~--~~~~~~~~D~~d~~~l~~~l~~~---   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGY--GEIDITTVDADSIEELVALINEV---   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTC--CCCEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcC--CceEEEEecCCCHHHHHHHHHhh---
Confidence            57999999 899999999999998   4899999999998888887754321  23788999999999999988865   


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                        ++|+||||++.
T Consensus        76 --~~DvVin~ag~   86 (405)
T 4ina_A           76 --KPQIVLNIALP   86 (405)
T ss_dssp             --CCSEEEECSCG
T ss_pred             --CCCEEEECCCc
Confidence              69999999984

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.75  E-value=1.3e-08  Score=86.20  Aligned_cols=80  Identities=24%  Similarity=0.347  Sum_probs=61.0

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -.++++||||++||||.++++.+...|++|++++|++++++.+ +++.        . ...+|.++.+++.+.+.+... 
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g--------~-~~~~d~~~~~~~~~~~~~~~~-  212 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIG--------F-DAAFNYKTVNSLEEALKKASP-  212 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT--------C-SEEEETTSCSCHHHHHHHHCT-
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcC--------C-cEEEecCCHHHHHHHHHHHhC-
Confidence            3679999999999999999999999999999999988777665 4442        1 123577774455555554432 


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                       +++|++|+|+|
T Consensus       213 -~~~d~vi~~~g  223 (333)
T 1v3u_A          213 -DGYDCYFDNVG  223 (333)
T ss_dssp             -TCEEEEEESSC
T ss_pred             -CCCeEEEECCC
Confidence             57999999998

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.74  E-value=2.2e-08  Score=88.04  Aligned_cols=78  Identities=17%  Similarity=0.214  Sum_probs=61.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ++|+++|+| +|++|+++++.|++.|++|++++|+.+..+++.+++.       .+..+.+|++|.+++.++++      
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~-------~~~~~~~Dv~d~~~l~~~l~------   67 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ-------HSTPISLDVNDDAALDAEVA------   67 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCT-------TEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcC-------CceEEEeecCCHHHHHHHHc------
Confidence            358999998 7999999999999999999999999876554433221       25678899999988877664      


Q ss_pred             CCccEEEeCCCCC
Q 044485           91 GKLDIMFNNAGTV  103 (257)
Q Consensus        91 ~~id~lv~~ag~~  103 (257)
                       .+|+||||++..
T Consensus        68 -~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 -KHDLVISLIPYT   79 (450)
T ss_dssp             -TSSEEEECCC--
T ss_pred             -CCcEEEECCccc
Confidence             699999999853

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.73  E-value=1.8e-08  Score=78.71  Aligned_cols=80  Identities=15%  Similarity=0.200  Sum_probs=57.7

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..++++||+||++|||.++++.+...|++|++++|+++..+...+ +   +     .. ..+|.++.+..+.+.+...  
T Consensus        37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~---g-----~~-~~~d~~~~~~~~~~~~~~~--  104 (198)
T 1pqw_A           37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-L---G-----VE-YVGDSRSVDFADEILELTD--  104 (198)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-T---C-----CS-EEEETTCSTHHHHHHHHTT--
T ss_pred             CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---C-----CC-EEeeCCcHHHHHHHHHHhC--
Confidence            367999999999999999999999999999999998776554422 2   1     11 2357777654444333221  


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                      .+++|++|+|+|
T Consensus       105 ~~~~D~vi~~~g  116 (198)
T 1pqw_A          105 GYGVDVVLNSLA  116 (198)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCCeEEEECCc
Confidence            136999999997

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.61  E-value=1.2e-08  Score=91.59  Aligned_cols=101  Identities=18%  Similarity=0.225  Sum_probs=65.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.+|+++|||| ||+|++++..|++.|++|++++|+.++.+++.+++..      ++.    ++.|   ++.+      
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~------~~~----~~~d---l~~~------  420 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGG------KAL----SLTD---LDNY------  420 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-------CE----ETTT---TTTC------
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC------cee----eHHH---hhhc------
Confidence            567899999999 5999999999999999999999999888887776621      122    1212   1100      


Q ss_pred             HcCCccEEEeCCCCCCCC---CCCCCCCCHHHHHHHHhhhchhh
Q 044485           89 QYGKLDIMFNNAGTVDEV---KPNILDNDQAEFERILSINLVGA  129 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~  129 (257)
                      ..+.+|+||||+|.....   ..++.+.+.+.+...+++|+.+.
T Consensus       421 ~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          421 HPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             --CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             cccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            113589999999974321   13455566666777788887654

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.61  E-value=1.5e-07  Score=83.00  Aligned_cols=82  Identities=16%  Similarity=0.208  Sum_probs=63.1

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKH-GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      ...++.+++++|+|+ |++|+++++.|++. |++|++++|+.++.+++.+. .       .+..+.+|+.|.+++.++++
T Consensus        17 ~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-~-------~~~~~~~D~~d~~~l~~~l~   87 (467)
T 2axq_A           17 IEGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-S-------GSKAISLDVTDDSALDKVLA   87 (467)
T ss_dssp             ------CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-G-------TCEEEECCTTCHHHHHHHHH
T ss_pred             cccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-c-------CCcEEEEecCCHHHHHHHHc
Confidence            345678899999998 99999999999998 78899999998877666543 1       15667899999988777664


Q ss_pred             HHHHHcCCccEEEeCCCCC
Q 044485           85 TAVTQYGKLDIMFNNAGTV  103 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~  103 (257)
                             .+|+||||++..
T Consensus        88 -------~~DvVIn~tp~~   99 (467)
T 2axq_A           88 -------DNDVVISLIPYT   99 (467)
T ss_dssp             -------TSSEEEECSCGG
T ss_pred             -------CCCEEEECCchh
Confidence                   699999999853

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.60  E-value=4.9e-08  Score=71.82  Aligned_cols=78  Identities=18%  Similarity=0.284  Sum_probs=57.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.+++++|+|+ |.+|..+++.|.+.|++|++++|+++..++..    ..+     ...+.+|.++.+.+.++      
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~~-----~~~~~~d~~~~~~l~~~------   66 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA-----THAVIANATEENELLSL------   66 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TTC-----SEEEECCTTCHHHHHTT------
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhC-----CEEEEeCCCCHHHHHhc------
Confidence            456688999998 99999999999999999999999876544332    111     45677899887655443      


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                      ...+.|++|++++.
T Consensus        67 ~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           67 GIRNFEYVIVAIGA   80 (144)
T ss_dssp             TGGGCSEEEECCCS
T ss_pred             CCCCCCEEEECCCC
Confidence            12369999999873

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.59  E-value=2.7e-07  Score=77.13  Aligned_cols=84  Identities=19%  Similarity=0.273  Sum_probs=63.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCc---chhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIK---DDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~---~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      .++++|++||+|+ ||+|++++..|++.|+ +|++++|+   .++.+++.+++....+    +.+...++.+.+++.+.+
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~----~~~~~~~~~~~~~l~~~l  224 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD----CKAQLFDIEDHEQLRKEI  224 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS----CEEEEEETTCHHHHHHHH
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC----CceEEeccchHHHHHhhh
Confidence            4678999999998 7999999999999999 79999999   7777777777654321    233445666666555443


Q ss_pred             HHHHHHcCCccEEEeCCCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTV  103 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~  103 (257)
                      .       ..|+|||+....
T Consensus       225 ~-------~aDiIINaTp~G  237 (315)
T 3tnl_A          225 A-------ESVIFTNATGVG  237 (315)
T ss_dssp             H-------TCSEEEECSSTT
T ss_pred             c-------CCCEEEECccCC
Confidence            3       589999997653

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.56  E-value=2.3e-07  Score=68.25  Aligned_cols=75  Identities=17%  Similarity=0.139  Sum_probs=60.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ..++++|+|+ |.+|.++++.|.++|++|++++++++..++..+.-         +.++.+|.++++.++++      ..
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~---------~~~~~gd~~~~~~l~~~------~~   68 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEG---------FDAVIADPTDESFYRSL------DL   68 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTT---------CEEEECCTTCHHHHHHS------CC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCC---------CcEEECCCCCHHHHHhC------Cc
Confidence            3478999998 78999999999999999999999987766654421         67788999999876654      12


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                      ...|++|.+.+
T Consensus        69 ~~~d~vi~~~~   79 (141)
T 3llv_A           69 EGVSAVLITGS   79 (141)
T ss_dssp             TTCSEEEECCS
T ss_pred             ccCCEEEEecC
Confidence            36899998876

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.53  E-value=1.8e-07  Score=79.52  Aligned_cols=81  Identities=31%  Similarity=0.343  Sum_probs=61.1

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..|+++||+|++|++|.++++.+...|++|++++|++++++.. +++.        .. ..+|.++.+++.+.+.++...
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~g--------~~-~~~d~~~~~~~~~~~~~~~~~  237 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSIG--------GE-VFIDFTKEKDIVGAVLKATDG  237 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHTT--------CC-EEEETTTCSCHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHcC--------Cc-eEEecCccHhHHHHHHHHhCC
Confidence            3678999999999999999999999999999999988776443 3331        11 234777655666666655433


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                        ++|++|+|+|.
T Consensus       238 --~~D~vi~~~g~  248 (347)
T 2hcy_A          238 --GAHGVINVSVS  248 (347)
T ss_dssp             --CEEEEEECSSC
T ss_pred             --CCCEEEECCCc
Confidence              69999999984

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.52  E-value=1e-07  Score=80.92  Aligned_cols=81  Identities=17%  Similarity=0.315  Sum_probs=59.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|+++||+|++|++|.++++.+...|++|++++|++++++.+.+++.        .. ..+|.++.+++.+.+.++..  
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g--------~~-~~~d~~~~~~~~~~~~~~~~--  223 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFG--------FD-DAFNYKEESDLTAALKRCFP--  223 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSC--------CS-EEEETTSCSCSHHHHHHHCT--
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--------Cc-eEEecCCHHHHHHHHHHHhC--
Confidence            67899999999999999999999999999999999877766543332        11 22466654444444444432  


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                      +++|++|+|+|.
T Consensus       224 ~~~d~vi~~~g~  235 (345)
T 2j3h_A          224 NGIDIYFENVGG  235 (345)
T ss_dssp             TCEEEEEESSCH
T ss_pred             CCCcEEEECCCH
Confidence            479999999983

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.50  E-value=7.4e-08  Score=79.83  Aligned_cols=81  Identities=19%  Similarity=0.231  Sum_probs=59.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++++|+++|||++ |+|+++++.|++.| +|++++|+.++.+++.+++......  .. .+.+|+++.          .+
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~--~~-~~~~d~~~~----------~~  189 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNK--KF-GEEVKFSGL----------DV  189 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTC--CH-HHHEEEECT----------TC
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccc--cc-ceeEEEeeH----------HH
Confidence            5789999999997 99999999999999 9999999988887777666421100  00 123444441          23


Q ss_pred             HcCCccEEEeCCCCCC
Q 044485           89 QYGKLDIMFNNAGTVD  104 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~  104 (257)
                      .++.+|+||||++...
T Consensus       190 ~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          190 DLDGVDIIINATPIGM  205 (287)
T ss_dssp             CCTTCCEEEECSCTTC
T ss_pred             hhCCCCEEEECCCCCC
Confidence            4568999999999754

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.49  E-value=1.7e-07  Score=78.94  Aligned_cols=79  Identities=18%  Similarity=0.196  Sum_probs=58.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .++++||+||+||+|.++++.+...|++|++++|++++++.+.+ +.        .. ..+|.++.+..+++.+...  .
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g--------~~-~~~~~~~~~~~~~~~~~~~--~  207 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AG--------AW-QVINYREEDLVERLKEITG--G  207 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HT--------CS-EEEETTTSCHHHHHHHHTT--T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC--------CC-EEEECCCccHHHHHHHHhC--C
Confidence            58999999999999999999999999999999999877665543 31        11 2246666655544433221  1


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                      .++|++|+|+|
T Consensus       208 ~~~D~vi~~~g  218 (327)
T 1qor_A          208 KKVRVVYDSVG  218 (327)
T ss_dssp             CCEEEEEECSC
T ss_pred             CCceEEEECCc
Confidence            36999999998

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.48  E-value=2.9e-07  Score=77.89  Aligned_cols=81  Identities=17%  Similarity=0.284  Sum_probs=59.5

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..|+++||+|++|++|.++++.+...|++|++++|++++++.+.+++..        . ...|..+.+..+.+.+ ..  
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~--------~-~~~~~~~~~~~~~~~~-~~--  215 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGF--------D-GAIDYKNEDLAAGLKR-EC--  215 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC--------S-EEEETTTSCHHHHHHH-HC--
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC--------C-EEEECCCHHHHHHHHH-hc--
Confidence            3689999999999999999999999999999999998877666444421        1 2246666544333332 22  


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      .+++|++|+|+|.
T Consensus       216 ~~~~d~vi~~~g~  228 (336)
T 4b7c_A          216 PKGIDVFFDNVGG  228 (336)
T ss_dssp             TTCEEEEEESSCH
T ss_pred             CCCceEEEECCCc
Confidence            2479999999983

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.48  E-value=2.7e-07  Score=77.96  Aligned_cols=81  Identities=20%  Similarity=0.311  Sum_probs=59.2

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..++++||+||+||+|.++++.+...|++|++++|++++++.+.+ +.        .. ..+|.++.+..+++.+.. . 
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g--------~~-~~~d~~~~~~~~~i~~~~-~-  211 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-LG--------CH-HTINYSTQDFAEVVREIT-G-  211 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT--------CS-EEEETTTSCHHHHHHHHH-T-
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC--------CC-EEEECCCHHHHHHHHHHh-C-
Confidence            367899999999999999999999999999999999877665533 32        11 224666655444443322 1 


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      ..++|++|+|+|.
T Consensus       212 ~~~~d~vi~~~g~  224 (333)
T 1wly_A          212 GKGVDVVYDSIGK  224 (333)
T ss_dssp             TCCEEEEEECSCT
T ss_pred             CCCCeEEEECCcH
Confidence            1369999999984

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.46  E-value=2.2e-07  Score=76.27  Aligned_cols=77  Identities=13%  Similarity=0.138  Sum_probs=58.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.+|+++|+|+ ||+|+++++.|++.|++|++++|+.++.+++.+++....    .+.  ..|+   +++       .+
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~----~~~--~~~~---~~~-------~~  178 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG----SIQ--ALSM---DEL-------EG  178 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS----SEE--ECCS---GGG-------TT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC----Cee--EecH---HHh-------cc
Confidence            578999999998 799999999999999999999999988888877764311    121  1232   221       11


Q ss_pred             HcCCccEEEeCCCCCC
Q 044485           89 QYGKLDIMFNNAGTVD  104 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~  104 (257)
                        +.+|+||||++...
T Consensus       179 --~~~DivVn~t~~~~  192 (271)
T 1nyt_A          179 --HEFDLIINATSSGI  192 (271)
T ss_dssp             --CCCSEEEECCSCGG
T ss_pred             --CCCCEEEECCCCCC
Confidence              57999999999653

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.45  E-value=2.5e-07  Score=78.95  Aligned_cols=79  Identities=18%  Similarity=0.308  Sum_probs=57.5

Q ss_pred             CC--cEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           11 QG--KVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        11 ~~--k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+  +++||+|++||||.++++.+...|+ +|+++++++++++.+.+++.        .. ..+|..+.+..+. +.+..
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g--------~~-~~~d~~~~~~~~~-~~~~~  227 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELG--------FD-AAINYKKDNVAEQ-LRESC  227 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC--------CS-EEEETTTSCHHHH-HHHHC
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC--------Cc-eEEecCchHHHHH-HHHhc
Confidence            46  8999999999999999999999999 99999999877666554342        11 2356666433333 22222


Q ss_pred             HHcCCccEEEeCCC
Q 044485           88 TQYGKLDIMFNNAG  101 (257)
Q Consensus        88 ~~~~~id~lv~~ag  101 (257)
                      .  +++|++|+|+|
T Consensus       228 ~--~~~d~vi~~~G  239 (357)
T 2zb4_A          228 P--AGVDVYFDNVG  239 (357)
T ss_dssp             T--TCEEEEEESCC
T ss_pred             C--CCCCEEEECCC
Confidence            1  26999999998

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.44  E-value=3.4e-07  Score=78.07  Aligned_cols=80  Identities=19%  Similarity=0.292  Sum_probs=58.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|+++||+||+||+|.++++.+...|++|++++|++++++.+ +++.        .. ..+|..+.+..+++.+.. . .
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g--------~~-~~~~~~~~~~~~~~~~~~-~-~  229 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLG--------AA-AGFNYKKEDFSEATLKFT-K-G  229 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHT--------CS-EEEETTTSCHHHHHHHHT-T-T
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC--------Cc-EEEecCChHHHHHHHHHh-c-C
Confidence            578999999999999999999999999999999998777665 3442        11 235666654444433221 1 1


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                      +++|++|+|+|.
T Consensus       230 ~~~d~vi~~~G~  241 (354)
T 2j8z_A          230 AGVNLILDCIGG  241 (354)
T ss_dssp             SCEEEEEESSCG
T ss_pred             CCceEEEECCCc
Confidence            369999999984

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.42  E-value=4.6e-07  Score=77.17  Aligned_cols=80  Identities=16%  Similarity=0.218  Sum_probs=57.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .++++||+|++||+|.++++.+...|++|++++|++++++.. +++.        .. ..+|..+.+..+++.+.. . .
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g--------a~-~~~d~~~~~~~~~~~~~~-~-~  237 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQNG--------AH-EVFNHREVNYIDKIKKYV-G-E  237 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT--------CS-EEEETTSTTHHHHHHHHH-C-T
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHcC--------CC-EEEeCCCchHHHHHHHHc-C-C
Confidence            578999999999999999999999999999999998776643 3331        11 235666654444332221 1 1


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                      +++|++|+|+|.
T Consensus       238 ~~~D~vi~~~G~  249 (351)
T 1yb5_A          238 KGIDIIIEMLAN  249 (351)
T ss_dssp             TCEEEEEESCHH
T ss_pred             CCcEEEEECCCh
Confidence            269999999983

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.40  E-value=9.1e-07  Score=75.87  Aligned_cols=78  Identities=21%  Similarity=0.263  Sum_probs=61.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+.+++++|+|+ |++|.++++.+...|++|++++|+.+.++...+...        .. +.+|.++.+++++.+.    
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g--------~~-~~~~~~~~~~l~~~~~----  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG--------GR-VITLTATEANIKKSVQ----  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT--------TS-EEEEECCHHHHHHHHH----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC--------ce-EEEecCCHHHHHHHHh----
Confidence            578899999999 999999999999999999999999887766554331        11 4567778877766653    


Q ss_pred             HcCCccEEEeCCCCC
Q 044485           89 QYGKLDIMFNNAGTV  103 (257)
Q Consensus        89 ~~~~id~lv~~ag~~  103 (257)
                         ..|++|+|++..
T Consensus       229 ---~~DvVi~~~g~~  240 (369)
T 2eez_A          229 ---HADLLIGAVLVP  240 (369)
T ss_dssp             ---HCSEEEECCC--
T ss_pred             ---CCCEEEECCCCC
Confidence               589999999864

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.29  E-value=1.4e-06  Score=73.92  Aligned_cols=80  Identities=14%  Similarity=0.292  Sum_probs=57.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKH-GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .++++||+|+++++|.++++.+... |++|+++++++++++.+. ++..        . ..+|..+.+..+++ .++...
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~g~--------~-~~~~~~~~~~~~~~-~~~~~~  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGA--------D-YVINASMQDPLAEI-RRITES  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTC--------S-EEEETTTSCHHHHH-HHHTTT
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCC--------C-EEecCCCccHHHHH-HHHhcC
Confidence            6789999999999999999999999 999999999987766553 3321        1 12456554433332 222211


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                       +++|++|+|+|.
T Consensus       239 -~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 -KGVDAVIDLNNS  250 (347)
T ss_dssp             -SCEEEEEESCCC
T ss_pred             -CCceEEEECCCC
Confidence             479999999984

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.29  E-value=1.7e-06  Score=64.69  Aligned_cols=83  Identities=19%  Similarity=0.216  Sum_probs=58.0

Q ss_pred             cccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            4 NLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         4 ~~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      ..|..+..+++++|.|+ |.+|..+++.|.+.|++|++++|+++..+.+.+   ..     .+..+..|..+++.+.+. 
T Consensus        11 ~~~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~-----g~~~~~~d~~~~~~l~~~-   80 (155)
T 2g1u_A           11 HHMSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF-----SGFTVVGDAAEFETLKEC-   80 (155)
T ss_dssp             ------CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC-----CSEEEESCTTSHHHHHTT-
T ss_pred             hhhhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC-----CCcEEEecCCCHHHHHHc-
Confidence            45778888999999996 999999999999999999999999876544321   11     145677888876544321 


Q ss_pred             HHHHHHcCCccEEEeCCC
Q 044485           84 NTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag  101 (257)
                           .....|++|.+.+
T Consensus        81 -----~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 -----GMEKADMVFAFTN   93 (155)
T ss_dssp             -----TGGGCSEEEECSS
T ss_pred             -----CcccCCEEEEEeC
Confidence                 1236899999987

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.29  E-value=3.5e-06  Score=70.34  Aligned_cols=84  Identities=15%  Similarity=0.275  Sum_probs=60.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCc---chhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIK---DDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~---~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      .++++|++||+|+ ||.|++++..|++.|+ +|+++.|+   .++.+++.+++....+    ......+..+.+...+.+
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~----~~v~~~~~~~l~~~~~~l  218 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD----CVVTVTDLADQHAFTEAL  218 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS----CEEEEEETTCHHHHHHHH
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC----cceEEechHhhhhhHhhc
Confidence            3678999999998 8999999999999998 79999999   7777777776654321    223344555543333222


Q ss_pred             HHHHHHcCCccEEEeCCCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTV  103 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~  103 (257)
                      .       ..|+|||+....
T Consensus       219 ~-------~~DiIINaTp~G  231 (312)
T 3t4e_A          219 A-------SADILTNGTKVG  231 (312)
T ss_dssp             H-------HCSEEEECSSTT
T ss_pred             c-------CceEEEECCcCC
Confidence            2       489999987654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.25  E-value=2.3e-06  Score=72.85  Aligned_cols=80  Identities=23%  Similarity=0.309  Sum_probs=58.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -.|+++||+||+|++|.++++.+...|++|+++++++++++.+.+ +..        . ...|..+.+..+.+. +..  
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa--------~-~~~~~~~~~~~~~~~-~~~--  232 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-LGA--------K-RGINYRSEDFAAVIK-AET--  232 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTC--------S-EEEETTTSCHHHHHH-HHH--
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCC--------C-EEEeCCchHHHHHHH-HHh--
Confidence            367899999999999999999999999999999999887765543 321        1 124555554443333 332  


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      .+++|++|+|+|.
T Consensus       233 ~~g~Dvvid~~g~  245 (353)
T 4dup_A          233 GQGVDIILDMIGA  245 (353)
T ss_dssp             SSCEEEEEESCCG
T ss_pred             CCCceEEEECCCH
Confidence            3479999999984

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.23  E-value=3.8e-06  Score=69.27  Aligned_cols=82  Identities=20%  Similarity=0.286  Sum_probs=59.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++....+.   +.+...+..+   +.+.+.  
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~---~~i~~~~~~~---l~~~l~--  193 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGR---EAVVGVDARG---IEDVIA--  193 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTS---CCEEEECSTT---HHHHHH--
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCC---ceEEEcCHHH---HHHHHh--
Confidence            3678999999998 8999999999999999 6999999999888888777543211   2233344333   333222  


Q ss_pred             HHHcCCccEEEeCCCCC
Q 044485           87 VTQYGKLDIMFNNAGTV  103 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~  103 (257)
                           ..|+|||+....
T Consensus       194 -----~~DiVInaTp~G  205 (283)
T 3jyo_A          194 -----AADGVVNATPMG  205 (283)
T ss_dssp             -----HSSEEEECSSTT
T ss_pred             -----cCCEEEECCCCC
Confidence                 489999998653

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.21  E-value=7.1e-06  Score=59.75  Aligned_cols=75  Identities=25%  Similarity=0.411  Sum_probs=56.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +++++|+|+ |.+|..+++.|.+.|++|++++|+++..++..+..        .+.++..|.++.+.+.+.      ...
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~--------~~~~~~~d~~~~~~l~~~------~~~   68 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI--------DALVINGDCTKIKTLEDA------GIE   68 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--------SSEEEESCTTSHHHHHHT------TTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc--------CcEEEEcCCCCHHHHHHc------Ccc
Confidence            468999987 99999999999999999999999887665554332        155677898887654321      124


Q ss_pred             CccEEEeCCC
Q 044485           92 KLDIMFNNAG  101 (257)
Q Consensus        92 ~id~lv~~ag  101 (257)
                      ..|++|.+.+
T Consensus        69 ~~d~vi~~~~   78 (140)
T 1lss_A           69 DADMYIAVTG   78 (140)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEeeC
Confidence            6899999975

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.21  E-value=3.2e-06  Score=71.63  Aligned_cols=79  Identities=15%  Similarity=0.199  Sum_probs=56.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .++++||+|++|++|..+++.+...|++|++++|++++++.+. ++.        .. ..+|.++.+..++ +.++.. .
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g--------a~-~~~d~~~~~~~~~-~~~~~~-~  233 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALG--------AD-ETVNYTHPDWPKE-VRRLTG-G  233 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHT--------CS-EEEETTSTTHHHH-HHHHTT-T
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcC--------CC-EEEcCCcccHHHH-HHHHhC-C
Confidence            5789999999999999999999999999999999987776553 332        11 1246666532222 222211 1


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                      .++|++|+|+|
T Consensus       234 ~~~d~vi~~~g  244 (343)
T 2eih_A          234 KGADKVVDHTG  244 (343)
T ss_dssp             TCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence            36999999998

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.19  E-value=2.4e-06  Score=72.15  Aligned_cols=81  Identities=20%  Similarity=0.316  Sum_probs=57.0

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -.|+++||+||+|++|.++++.+...|++|+++++++++++.+ +++..        . ...|..+.+..+.+.+ ... 
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga--------~-~~~~~~~~~~~~~~~~-~~~-  214 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEYGA--------E-YLINASKEDILRQVLK-FTN-  214 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTC--------S-EEEETTTSCHHHHHHH-HTT-
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCC--------c-EEEeCCCchHHHHHHH-HhC-
Confidence            3688999999999999999999999999999999988776644 33321        1 1245555443333222 211 


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      ..++|++|+|+|.
T Consensus       215 ~~g~D~vid~~g~  227 (334)
T 3qwb_A          215 GKGVDASFDSVGK  227 (334)
T ss_dssp             TSCEEEEEECCGG
T ss_pred             CCCceEEEECCCh
Confidence            1269999999984

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.15  E-value=3.5e-06  Score=70.83  Aligned_cols=81  Identities=16%  Similarity=0.264  Sum_probs=57.5

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -.|+++||+||+|++|.++++.+...|++|+++++++++++.+. ++..       -  ...|..+.+..+.+.+.. . 
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga-------~--~~~~~~~~~~~~~~~~~~-~-  206 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGA-------W--ETIDYSHEDVAKRVLELT-D-  206 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTC-------S--EEEETTTSCHHHHHHHHT-T-
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCC-------C--EEEeCCCccHHHHHHHHh-C-
Confidence            35889999999999999999999999999999999988776554 3321       1  124555544333332211 1 


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      ..++|++|+|+|.
T Consensus       207 ~~g~Dvvid~~g~  219 (325)
T 3jyn_A          207 GKKCPVVYDGVGQ  219 (325)
T ss_dssp             TCCEEEEEESSCG
T ss_pred             CCCceEEEECCCh
Confidence            1269999999984

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.13  E-value=4.1e-06  Score=70.89  Aligned_cols=81  Identities=15%  Similarity=0.182  Sum_probs=57.4

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -.|+++||+|+++++|..+++.+...|++|+++++++++++.+.+ +..        . ...|..+.+..+.+.+ ... 
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lga--------~-~~~~~~~~~~~~~~~~-~~~-  210 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LGA--------A-YVIDTSTAPLYETVME-LTN-  210 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTC--------S-EEEETTTSCHHHHHHH-HTT-
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CCC--------c-EEEeCCcccHHHHHHH-HhC-
Confidence            367899999999999999999999999999999999887765544 321        1 1235555443333222 211 


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      ..++|++|+|+|.
T Consensus       211 ~~g~Dvvid~~g~  223 (340)
T 3gms_A          211 GIGADAAIDSIGG  223 (340)
T ss_dssp             TSCEEEEEESSCH
T ss_pred             CCCCcEEEECCCC
Confidence            1269999999984

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.12  E-value=7.5e-06  Score=71.93  Aligned_cols=86  Identities=20%  Similarity=0.318  Sum_probs=60.5

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeE--ecCCC---------CHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV--HCDVT---------KEKD   78 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~--~~D~~---------~~~~   78 (257)
                      ..|+++||+|++|+||.+.++.+...|++|+++++++++++.+ +++..      ...+-  ..|+.         +.++
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~lGa------~~~i~~~~~~~~~~~~~~~~~~~~~  291 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RALGC------DLVINRAELGITDDIADDPRRVVET  291 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTC------CCEEEHHHHTCCTTGGGCHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCC------CEEEecccccccccccccccccchh
Confidence            4689999999999999999999999999999999888776655 33321      11111  11221         2344


Q ss_pred             HHHHHHHHHHHcC-CccEEEeCCCC
Q 044485           79 IENAVNTAVTQYG-KLDIMFNNAGT  102 (257)
Q Consensus        79 v~~~~~~~~~~~~-~id~lv~~ag~  102 (257)
                      ++.+.+++.+..+ ++|++|+|+|.
T Consensus       292 ~~~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          292 GRKLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHHHHSSCCSEEEECSCH
T ss_pred             hhHHHHHHHHHhCCCceEEEECCCc
Confidence            5555666666544 69999999984

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.10  E-value=2e-05  Score=58.59  Aligned_cols=77  Identities=10%  Similarity=0.120  Sum_probs=58.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+.++|.|+ |.+|+.+++.|.+.|++|++++++. +..++..+....      .+.++..|.++++.+.+.      ..
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~------~~~~i~gd~~~~~~l~~a------~i   69 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD------NADVIPGDSNDSSVLKKA------GI   69 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT------TCEEEESCTTSHHHHHHH------TT
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcC------CCeEEEcCCCCHHHHHHc------Ch
Confidence            467899986 9999999999999999999999974 444444443321      267889999998876553      12


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                      ...|.+|.+.+
T Consensus        70 ~~ad~vi~~~~   80 (153)
T 1id1_A           70 DRCRAILALSD   80 (153)
T ss_dssp             TTCSEEEECSS
T ss_pred             hhCCEEEEecC
Confidence            36899998876

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.08  E-value=7e-06  Score=70.21  Aligned_cols=74  Identities=19%  Similarity=0.397  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc---hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKD---DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .|+++||+|+ |++|..+++.+...|++|+++++++   ++++.+ +++.        +..+  | .+ +-.++ +.+ .
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~g--------a~~v--~-~~-~~~~~-~~~-~  243 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EETK--------TNYY--N-SS-NGYDK-LKD-S  243 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHHT--------CEEE--E-CT-TCSHH-HHH-H
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHhC--------Ccee--c-hH-HHHHH-HHH-h
Confidence            3899999999 9999999999999999999999987   665433 3332        2333  5 44 22222 222 2


Q ss_pred             HHcCCccEEEeCCCC
Q 044485           88 TQYGKLDIMFNNAGT  102 (257)
Q Consensus        88 ~~~~~id~lv~~ag~  102 (257)
                      .  +++|++|+++|.
T Consensus       244 ~--~~~d~vid~~g~  256 (366)
T 2cdc_A          244 V--GKFDVIIDATGA  256 (366)
T ss_dssp             H--CCEEEEEECCCC
T ss_pred             C--CCCCEEEECCCC
Confidence            2  579999999985

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.07  E-value=1.6e-05  Score=67.90  Aligned_cols=78  Identities=23%  Similarity=0.248  Sum_probs=57.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+.+++++|+|+ |++|+++++.+...|++|++++|+.++++.+.+....      .+..   +..+.+++.+.+.    
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~------~~~~---~~~~~~~~~~~~~----  229 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS------RVEL---LYSNSAEIETAVA----  229 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GSEE---EECCHHHHHHHHH----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc------eeEe---eeCCHHHHHHHHc----
Confidence            367799999999 9999999999999999999999999887776554421      0211   2234444433322    


Q ss_pred             HcCCccEEEeCCCCC
Q 044485           89 QYGKLDIMFNNAGTV  103 (257)
Q Consensus        89 ~~~~id~lv~~ag~~  103 (257)
                         ..|++|++++..
T Consensus       230 ---~~DvVI~~~~~~  241 (361)
T 1pjc_A          230 ---EADLLIGAVLVP  241 (361)
T ss_dssp             ---TCSEEEECCCCT
T ss_pred             ---CCCEEEECCCcC
Confidence               699999999864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.06  E-value=1.5e-05  Score=67.69  Aligned_cols=79  Identities=14%  Similarity=0.164  Sum_probs=56.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      ++++||+||+|++|...++.+...|++|+++++++++++.+. ++..        . ...|..+.+..+. +.++... .
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~Ga--------~-~~~~~~~~~~~~~-v~~~~~~-~  232 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGA--------A-HVLNEKAPDFEAT-LREVMKA-E  232 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHTC--------S-EEEETTSTTHHHH-HHHHHHH-H
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCC--------C-EEEECCcHHHHHH-HHHHhcC-C
Confidence            489999999999999999999999999999999888776554 3321        1 1235555443333 3333222 2


Q ss_pred             CccEEEeCCCC
Q 044485           92 KLDIMFNNAGT  102 (257)
Q Consensus        92 ~id~lv~~ag~  102 (257)
                      ++|++|+|+|.
T Consensus       233 g~D~vid~~g~  243 (349)
T 3pi7_A          233 QPRIFLDAVTG  243 (349)
T ss_dssp             CCCEEEESSCH
T ss_pred             CCcEEEECCCC
Confidence            69999999984

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.05  E-value=5.7e-06  Score=70.08  Aligned_cols=78  Identities=22%  Similarity=0.316  Sum_probs=55.2

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..|+++||+|++|++|.++++.+...|++|++++++.++++.+.+ +..       -.+  .|..  +++.   +++.+.
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga-------~~v--~~~~--~~~~---~~v~~~  222 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-VGA-------DIV--LPLE--EGWA---KAVREA  222 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTC-------SEE--EESS--TTHH---HHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCC-------cEE--ecCc--hhHH---HHHHHH
Confidence            358899999999999999999999999999999998887755443 321       112  2333  2222   233333


Q ss_pred             cC--CccEEEeCCCC
Q 044485           90 YG--KLDIMFNNAGT  102 (257)
Q Consensus        90 ~~--~id~lv~~ag~  102 (257)
                      .+  ++|++|+|+|.
T Consensus       223 ~~~~g~Dvvid~~g~  237 (342)
T 4eye_A          223 TGGAGVDMVVDPIGG  237 (342)
T ss_dssp             TTTSCEEEEEESCC-
T ss_pred             hCCCCceEEEECCch
Confidence            22  69999999984

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.03  E-value=1.2e-05  Score=68.76  Aligned_cols=78  Identities=17%  Similarity=0.270  Sum_probs=57.6

Q ss_pred             cccccCCc--EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            6 MLRRLQGK--VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         6 ~~~~~~~k--~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      +..+++||  +|+|.|| |++|+.+++.|++ ..+|.+++|+.+.+++..+          .+..+.+|++|.+++.+++
T Consensus         8 ~~~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~----------~~~~~~~d~~d~~~l~~~~   75 (365)
T 3abi_A            8 HHHHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE----------FATPLKVDASNFDKLVEVM   75 (365)
T ss_dssp             --------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT----------TSEEEECCTTCHHHHHHHH
T ss_pred             ccccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc----------cCCcEEEecCCHHHHHHHH
Confidence            33344444  6999998 9999999999865 5789999999877766532          1566789999999888876


Q ss_pred             HHHHHHcCCccEEEeCCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGT  102 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~  102 (257)
                      +       ..|+||++++.
T Consensus        76 ~-------~~DvVi~~~p~   87 (365)
T 3abi_A           76 K-------EFELVIGALPG   87 (365)
T ss_dssp             T-------TCSEEEECCCG
T ss_pred             h-------CCCEEEEecCC
Confidence            5       68999999874

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.03  E-value=1.5e-05  Score=65.28  Aligned_cols=77  Identities=10%  Similarity=0.100  Sum_probs=57.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++....    .+..  .|+   +++.       +
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~----~~~~--~~~---~~~~-------~  178 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG----NIQA--VSM---DSIP-------L  178 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS----CEEE--EEG---GGCC-------C
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC----CeEE--eeH---HHhc-------c
Confidence            578899999998 799999999999999999999999988888887764311    1222  222   1110       1


Q ss_pred             HcCCccEEEeCCCCCC
Q 044485           89 QYGKLDIMFNNAGTVD  104 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~  104 (257)
                        +..|+|||+++...
T Consensus       179 --~~~DivIn~t~~~~  192 (272)
T 1p77_A          179 --QTYDLVINATSAGL  192 (272)
T ss_dssp             --SCCSEEEECCCC--
T ss_pred             --CCCCEEEECCCCCC
Confidence              47999999998653

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.01  E-value=1.4e-05  Score=70.45  Aligned_cols=85  Identities=20%  Similarity=0.320  Sum_probs=62.9

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEe---cC--------CCCHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVH---CD--------VTKEKD   78 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~---~D--------~~~~~~   78 (257)
                      -.|+++||+|++|++|...++.+...|++|+++++++++++.+ +++...       .++.   .|        ..++++
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~lGa~-------~vi~~~~~d~~~~~~~~~~~~~~  298 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAMGAE-------AIIDRNAEGYRFWKDENTQDPKE  298 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCC-------EEEETTTTTCCSEEETTEECHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HhhCCc-------EEEecCcCcccccccccccchHH
Confidence            3678999999999999999999999999999999888776655 334211       1111   11        245667


Q ss_pred             HHHHHHHHHHHcC--CccEEEeCCCC
Q 044485           79 IENAVNTAVTQYG--KLDIMFNNAGT  102 (257)
Q Consensus        79 v~~~~~~~~~~~~--~id~lv~~ag~  102 (257)
                      ++++.+++.+..+  ++|++|.++|.
T Consensus       299 ~~~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          299 WKRFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence            7777777777553  79999999983

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.00  E-value=1.2e-05  Score=66.71  Aligned_cols=78  Identities=19%  Similarity=0.239  Sum_probs=57.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++.+|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+++....+     ..+     +.+++       .
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-----~~~-----~~~~~-------~  199 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-----AYF-----SLAEA-------E  199 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-----CEE-----CHHHH-------H
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-----cee-----eHHHH-------H
Confidence            578999999998 7999999999999998 899999999888888777642110     111     22222       2


Q ss_pred             HHcCCccEEEeCCCCCC
Q 044485           88 TQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~  104 (257)
                      +.....|+|||+.+...
T Consensus       200 ~~~~~aDivIn~t~~~~  216 (297)
T 2egg_A          200 TRLAEYDIIINTTSVGM  216 (297)
T ss_dssp             HTGGGCSEEEECSCTTC
T ss_pred             hhhccCCEEEECCCCCC
Confidence            23346999999998653

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.97  E-value=2.2e-05  Score=67.38  Aligned_cols=79  Identities=19%  Similarity=0.239  Sum_probs=59.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+.+++++|+|+ |++|.++++.+...|++|++++|+.+.++.+.+....      .+   .++..+.+++.+.+.    
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~------~~---~~~~~~~~~l~~~l~----  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG------RI---HTRYSSAYELEGAVK----  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT------SS---EEEECCHHHHHHHHH----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC------ee---EeccCCHHHHHHHHc----
Confidence            578999999998 9999999999999999999999998877666544421      12   233445555554443    


Q ss_pred             HcCCccEEEeCCCCCC
Q 044485           89 QYGKLDIMFNNAGTVD  104 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~  104 (257)
                         ..|++|++++...
T Consensus       231 ---~aDvVi~~~~~p~  243 (377)
T 2vhw_A          231 ---RADLVIGAVLVPG  243 (377)
T ss_dssp             ---HCSEEEECCCCTT
T ss_pred             ---CCCEEEECCCcCC
Confidence               4899999988643

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.95  E-value=3e-05  Score=65.51  Aligned_cols=77  Identities=22%  Similarity=0.290  Sum_probs=55.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|+++||+|+ |++|..+++.+...|++|+.++|++++++.+. ++.        .. ..+|..+.+..+. +.++.   
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lG--------a~-~~~d~~~~~~~~~-~~~~~---  228 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELG--------AD-LVVNPLKEDAAKF-MKEKV---  228 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTT--------CS-EEECTTTSCHHHH-HHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCC--------CC-EEecCCCccHHHH-HHHHh---
Confidence            5789999999 88999999999999999999999987776553 331        11 1246665432222 33322   


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                      +++|++|+++|.
T Consensus       229 ~~~d~vid~~g~  240 (339)
T 1rjw_A          229 GGVHAAVVTAVS  240 (339)
T ss_dssp             SSEEEEEESSCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999984

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.94  E-value=1.7e-05  Score=67.64  Aligned_cols=79  Identities=20%  Similarity=0.354  Sum_probs=55.4

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -.|+++||+||+|++|..+++.+...|++|+++++++++++.+.+ +.        .. ...|..+.+ +.+.+.+..  
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~G--------a~-~~~~~~~~~-~~~~~~~~~--  228 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LG--------CD-RPINYKTEP-VGTVLKQEY--  228 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT--------CS-EEEETTTSC-HHHHHHHHC--
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-cC--------Cc-EEEecCChh-HHHHHHHhc--
Confidence            367899999999999999999999999999999998777655433 31        11 123444432 223233221  


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                      .+++|++|+|+|
T Consensus       229 ~~g~D~vid~~g  240 (362)
T 2c0c_A          229 PEGVDVVYESVG  240 (362)
T ss_dssp             TTCEEEEEECSC
T ss_pred             CCCCCEEEECCC
Confidence            136999999998

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.92  E-value=2.6e-05  Score=64.74  Aligned_cols=96  Identities=20%  Similarity=0.241  Sum_probs=62.5

Q ss_pred             ccCCcE-EEEecCCC-----------------c-hHHHHHHHHHHcCCeEEEeeCcchhhH------h--HHHHhccCCC
Q 044485            9 RLQGKV-ALITGGAR-----------------G-IGECTARLFSKHGAKVLIADIKDDLGE------S--VCKDIGSSSS   61 (257)
Q Consensus         9 ~~~~k~-~lItGas~-----------------g-iG~~ia~~l~~~g~~Vi~~~r~~~~~~------~--~~~~~~~~~~   61 (257)
                      ++.||+ +|||+|..                 | .|.++|++++++|+.|+++++...-..      .  ..+.+.....
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            467888 99998876                 6 999999999999999999987543110      0  0111111000


Q ss_pred             CCCCceeEecCCCCHHHHHHHHHHH------------------------------HHHcCCccEEEeCCCCCC
Q 044485           62 SASGCSYVHCDVTKEKDIENAVNTA------------------------------VTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        62 ~~~~v~~~~~D~~~~~~v~~~~~~~------------------------------~~~~~~id~lv~~ag~~~  104 (257)
                      ....+..+.+|+.+.+++.+.+.+.                              .+.++..|++|.+|++..
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence            1112446677777776666666543                              233567999999999864

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.92  E-value=4.7e-05  Score=62.61  Aligned_cols=76  Identities=11%  Similarity=0.209  Sum_probs=57.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+++....    .+..+..+  +   +.      
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~----~~~~~~~~--~---l~------  185 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG----EVKAQAFE--Q---LK------  185 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS----CEEEEEGG--G---CC------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC----CeeEeeHH--H---hc------
Confidence            3578999999998 7999999999999996 89999999998888888775432    13333221  1   10      


Q ss_pred             HHHcCCccEEEeCCCCC
Q 044485           87 VTQYGKLDIMFNNAGTV  103 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~  103 (257)
                          ...|+|||+....
T Consensus       186 ----~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 ----QSYDVIINSTSAS  198 (281)
T ss_dssp             ----SCEEEEEECSCCC
T ss_pred             ----CCCCEEEEcCcCC
Confidence                3689999998754

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.92  E-value=1.4e-05  Score=70.24  Aligned_cols=46  Identities=24%  Similarity=0.392  Sum_probs=39.9

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK   54 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   54 (257)
                      ..+.||+++|||++ +||+++|+.|+..|++|+++++++...++...
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~  306 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM  306 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            35889999999987 99999999999999999999998876555443

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.90  E-value=2.5e-05  Score=66.18  Aligned_cols=76  Identities=24%  Similarity=0.465  Sum_probs=53.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|+++||+||+|++|...++.+...|++|+++ +++++++.+ +++.        ...  +| .+.+ +.+.+.+.... 
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~lG--------a~~--i~-~~~~-~~~~~~~~~~~-  214 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDLG--------ATP--ID-ASRE-PEDYAAEHTAG-  214 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHHT--------SEE--EE-TTSC-HHHHHHHHHTT-
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHcC--------CCE--ec-cCCC-HHHHHHHHhcC-
Confidence            68899999999999999999999999999998 666665543 3342        222  44 3333 33333333221 


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                      .++|++|+|+|
T Consensus       215 ~g~D~vid~~g  225 (343)
T 3gaz_A          215 QGFDLVYDTLG  225 (343)
T ss_dssp             SCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence            36999999998

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.89  E-value=2.4e-05  Score=59.98  Aligned_cols=78  Identities=15%  Similarity=0.142  Sum_probs=58.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKH-GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++.+++++|.|+ |.+|..+++.|.+. |++|++++++++..++..+    .+     +..+.+|.++++.+.++     
T Consensus        36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g-----~~~~~gd~~~~~~l~~~-----  100 (183)
T 3c85_A           36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG-----RNVISGDATDPDFWERI-----  100 (183)
T ss_dssp             CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT-----CCEEECCTTCHHHHHTB-----
T ss_pred             CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC-----CCEEEcCCCCHHHHHhc-----
Confidence            455778999985 99999999999999 9999999999877655432    11     56677899887655432     


Q ss_pred             HHcCCccEEEeCCC
Q 044485           88 TQYGKLDIMFNNAG  101 (257)
Q Consensus        88 ~~~~~id~lv~~ag  101 (257)
                      ......|++|.+.+
T Consensus       101 ~~~~~ad~vi~~~~  114 (183)
T 3c85_A          101 LDTGHVKLVLLAMP  114 (183)
T ss_dssp             CSCCCCCEEEECCS
T ss_pred             cCCCCCCEEEEeCC
Confidence            01236899998876

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.88  E-value=4.8e-05  Score=64.44  Aligned_cols=78  Identities=23%  Similarity=0.332  Sum_probs=55.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|+++||+||+|++|...++.+...|++|+++++++++++.+.+ +..       -.+  .|..+  ++.+.+.+.  ..
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa-------~~v--i~~~~--~~~~~~~~~--~~  215 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MGA-------DIV--LNHKE--SLLNQFKTQ--GI  215 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HTC-------SEE--ECTTS--CHHHHHHHH--TC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCC-------cEE--EECCc--cHHHHHHHh--CC
Confidence            68999999999999999999999999999999998877665544 321       111  23332  222223322  22


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                      +++|++|+|+|.
T Consensus       216 ~g~Dvv~d~~g~  227 (346)
T 3fbg_A          216 ELVDYVFCTFNT  227 (346)
T ss_dssp             CCEEEEEESSCH
T ss_pred             CCccEEEECCCc
Confidence            379999999984

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.88  E-value=2.9e-05  Score=64.51  Aligned_cols=73  Identities=16%  Similarity=0.269  Sum_probs=53.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC-HHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK-EKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~~   89 (257)
                      .|+++||+|++|++|..+++.+...|++|+.+++++++++.+. ++.        .. ...|..+ .+..    +++   
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~g--------a~-~~~~~~~~~~~~----~~~---  187 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALG--------AE-EAATYAEVPERA----KAW---  187 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTT--------CS-EEEEGGGHHHHH----HHT---
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcC--------CC-EEEECCcchhHH----HHh---
Confidence            5789999999999999999999999999999999888776553 331        11 1234444 2222    222   


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                       +++|++|+ +|.
T Consensus       188 -~~~d~vid-~g~  198 (302)
T 1iz0_A          188 -GGLDLVLE-VRG  198 (302)
T ss_dssp             -TSEEEEEE-CSC
T ss_pred             -cCceEEEE-CCH
Confidence             57999999 874

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.84  E-value=7e-05  Score=54.80  Aligned_cols=73  Identities=11%  Similarity=0.113  Sum_probs=58.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +.++|.|+ |.+|..+++.|.+.|++|++++++++..++..+.         .+.++..|.++++.++++      ....
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~---------g~~~i~gd~~~~~~l~~a------~i~~   71 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRER---------GVRAVLGNAANEEIMQLA------HLEC   71 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT---------TCEEEESCTTSHHHHHHT------TGGG
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc---------CCCEEECCCCCHHHHHhc------Cccc
Confidence            57888887 8899999999999999999999998877665431         167889999999866553      1125


Q ss_pred             ccEEEeCCC
Q 044485           93 LDIMFNNAG  101 (257)
Q Consensus        93 id~lv~~ag  101 (257)
                      .|.+|.+.+
T Consensus        72 ad~vi~~~~   80 (140)
T 3fwz_A           72 AKWLILTIP   80 (140)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEECC
Confidence            889998876

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.80  E-value=6.6e-05  Score=64.14  Aligned_cols=76  Identities=21%  Similarity=0.333  Sum_probs=56.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|+++||+|+ |++|..+++.+...|++|+++++++++++...+++.        .. ...|..+.+.+++       ..
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lG--------a~-~v~~~~~~~~~~~-------~~  249 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFG--------AD-SFLVSRDQEQMQA-------AA  249 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSC--------CS-EEEETTCHHHHHH-------TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC--------Cc-eEEeccCHHHHHH-------hh
Confidence            6889999996 999999999999999999999998887766554442        11 1245656543322       22


Q ss_pred             CCccEEEeCCCCC
Q 044485           91 GKLDIMFNNAGTV  103 (257)
Q Consensus        91 ~~id~lv~~ag~~  103 (257)
                      +++|++|+++|..
T Consensus       250 ~~~D~vid~~g~~  262 (366)
T 1yqd_A          250 GTLDGIIDTVSAV  262 (366)
T ss_dssp             TCEEEEEECCSSC
T ss_pred             CCCCEEEECCCcH
Confidence            5799999999853

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.80  E-value=5e-05  Score=61.38  Aligned_cols=83  Identities=14%  Similarity=0.262  Sum_probs=59.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcc-------------------hhhHhHHHHhccCCCCCCCcee
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKD-------------------DLGESVCKDIGSSSSSASGCSY   68 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~v~~   68 (257)
                      ++.+++|+|.|+ ||+|..+++.|++.|. ++++++++.                   ++.+.+.+.+....+ ..++..
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~v~~  105 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP-HIAITP  105 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC-CcEEEE
Confidence            467789999997 7999999999999997 699999987                   566666666654332 223556


Q ss_pred             EecCCCCHHHHHHHHHHHHHHcCCccEEEeCCC
Q 044485           69 VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        69 ~~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag  101 (257)
                      +..+++ .+.+.++++       ..|+||.+..
T Consensus       106 ~~~~~~-~~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          106 VNALLD-DAELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             ECSCCC-HHHHHHHHH-------TSSEEEECCS
T ss_pred             EeccCC-HhHHHHHHh-------CCCEEEEeCC
Confidence            666665 334444332       6899999875

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.75  E-value=7.2e-05  Score=59.03  Aligned_cols=73  Identities=21%  Similarity=0.270  Sum_probs=58.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      +++|.|+ |.+|..+++.|.++|++|++++++++..++..+...        +.++..|.++++.++++      .....
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~--------~~~i~gd~~~~~~l~~a------~i~~a   66 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLK--------ATIIHGDGSHKEILRDA------EVSKN   66 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSS--------SEEEESCTTSHHHHHHH------TCCTT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcC--------CeEEEcCCCCHHHHHhc------CcccC
Confidence            5899996 999999999999999999999999887766654431        67889999998776643      12368


Q ss_pred             cEEEeCCC
Q 044485           94 DIMFNNAG  101 (257)
Q Consensus        94 d~lv~~ag  101 (257)
                      |++|.+.+
T Consensus        67 d~vi~~~~   74 (218)
T 3l4b_C           67 DVVVILTP   74 (218)
T ss_dssp             CEEEECCS
T ss_pred             CEEEEecC
Confidence            99998765

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.75  E-value=0.00013  Score=62.06  Aligned_cols=84  Identities=15%  Similarity=0.101  Sum_probs=59.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      -.|+++||+|+ |++|...++.....|++ |+++++++++++.+.+. . .     .+..+..|-.+.+++.+.+.+...
T Consensus       178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~-~-----~~~~~~~~~~~~~~~~~~v~~~t~  249 (363)
T 3m6i_A          178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C-P-----EVVTHKVERLSAEESAKKIVESFG  249 (363)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C-T-----TCEEEECCSCCHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c-h-----hcccccccccchHHHHHHHHHHhC
Confidence            35789999998 99999999999999998 99999988877655443 2 1     145555665555555444433321


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                       -.++|++|.++|.
T Consensus       250 -g~g~Dvvid~~g~  262 (363)
T 3m6i_A          250 -GIEPAVALECTGV  262 (363)
T ss_dssp             -SCCCSEEEECSCC
T ss_pred             -CCCCCEEEECCCC
Confidence             1269999999984

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.73  E-value=2.5e-05  Score=57.48  Aligned_cols=72  Identities=18%  Similarity=0.230  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+++++|.|+ |++|+.+++.|.+.|++|++.+|+.+..+++.+++.        +...  +..+.   .+.++      
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~--------~~~~--~~~~~---~~~~~------   79 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE--------YEYV--LINDI---DSLIK------   79 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT--------CEEE--ECSCH---HHHHH------
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC--------CceE--eecCH---HHHhc------
Confidence            4899999996 999999999999999999999999988888777663        1111  22232   22222      


Q ss_pred             CCccEEEeCCCCC
Q 044485           91 GKLDIMFNNAGTV  103 (257)
Q Consensus        91 ~~id~lv~~ag~~  103 (257)
                       ..|++|++.+..
T Consensus        80 -~~Divi~at~~~   91 (144)
T 3oj0_A           80 -NNDVIITATSSK   91 (144)
T ss_dssp             -TCSEEEECSCCS
T ss_pred             -CCCEEEEeCCCC
Confidence             589999998754

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.69  E-value=0.00011  Score=62.92  Aligned_cols=77  Identities=23%  Similarity=0.342  Sum_probs=52.5

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..|+++||+||+|++|...++.+...|++|+++++ .++++.+ +++.        .. ...|..+.+..++    +.+ 
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~-~~lG--------a~-~v~~~~~~~~~~~----~~~-  245 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV-RKLG--------AD-DVIDYKSGSVEEQ----LKS-  245 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH-HHTT--------CS-EEEETTSSCHHHH----HHT-
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH-HHcC--------CC-EEEECCchHHHHH----Hhh-
Confidence            36789999999999999999999999999998884 4444333 3332        11 1235544432222    222 


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      .+++|++|+|+|.
T Consensus       246 ~~g~D~vid~~g~  258 (375)
T 2vn8_A          246 LKPFDFILDNVGG  258 (375)
T ss_dssp             SCCBSEEEESSCT
T ss_pred             cCCCCEEEECCCC
Confidence            2579999999984

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.66  E-value=0.00017  Score=59.44  Aligned_cols=91  Identities=13%  Similarity=0.242  Sum_probs=65.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcc------------------hhhHhHHHHhccCCCCCCCceeE
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKD------------------DLGESVCKDIGSSSSSASGCSYV   69 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~------------------~~~~~~~~~~~~~~~~~~~v~~~   69 (257)
                      ++.+++|+|.|+ ||+|..+++.|++.|. ++.+++.+.                  .+.+.+.+.+.+..+ ..++..+
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP-~v~v~~~  110 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINP-DVLFEVH  110 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCT-TSEEEEE
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCC-CcEEEEe
Confidence            567789999987 8999999999999996 488888765                  455555555554433 3447777


Q ss_pred             ecCCCCHHHHHHHHHHHHHH----cCCccEEEeCCC
Q 044485           70 HCDVTKEKDIENAVNTAVTQ----YGKLDIMFNNAG  101 (257)
Q Consensus        70 ~~D~~~~~~v~~~~~~~~~~----~~~id~lv~~ag  101 (257)
                      ..++++.+.++.+++.+...    ....|+||.+.-
T Consensus       111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            77887777777766544321    136889987765

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.64  E-value=0.00012  Score=61.70  Aligned_cols=138  Identities=12%  Similarity=0.025  Sum_probs=80.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC-------eEEEeeCc----chhhHhHHHHhccCCCCCCCceeEecCCCCHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGA-------KVLIADIK----DDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIE   80 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~-------~Vi~~~r~----~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~   80 (257)
                      .++++||||+|.+|.+++..|+..|.       .|++.+++    +++++....++.....   .+   ..|+....+..
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~---~~---~~~i~~~~~~~   78 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAF---PL---LAGMTAHADPM   78 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTC---TT---EEEEEEESSHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcc---cc---cCcEEEecCcH
Confidence            46899999999999999999999885       79999888    5444433344432110   01   12443333333


Q ss_pred             HHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh--------------------
Q 044485           81 NAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC--------------------  140 (257)
Q Consensus        81 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~--------------------  140 (257)
                      +.+       .+.|++|+.||....     ...+.   .+.+..|+.....+...+....                    
T Consensus        79 ~al-------~~aD~Vi~~ag~~~~-----~g~~r---~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~  143 (329)
T 1b8p_A           79 TAF-------KDADVALLVGARPRG-----PGMER---KDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIA  143 (329)
T ss_dssp             HHT-------TTCSEEEECCCCCCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH
T ss_pred             HHh-------CCCCEEEEeCCCCCC-----CCCCH---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHH
Confidence            322       379999999996542     12233   2345666666665544332211                    


Q ss_pred             -ccc-cCCCCchhhhhHHHHHHHHHHHHHHhc
Q 044485          141 -GII-GGAATHAYTSSKHGLLGLMKNTAVELG  170 (257)
Q Consensus       141 -~~~-~~~~~~~y~~sK~a~~~~~~~l~~e~~  170 (257)
                       ... +.+....|+.++.--..+.+.+++.+.
T Consensus       144 ~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          144 MKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             HHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence             011 122223466666555666777777664

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.64  E-value=0.00019  Score=62.10  Aligned_cols=74  Identities=18%  Similarity=0.382  Sum_probs=54.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.++..+++.        ...  .+.   +++.+.+    
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g--------~~~--~~~---~~l~~~l----  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG--------GEA--VRF---DELVDHL----  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT--------CEE--CCG---GGHHHHH----
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC--------Cce--ecH---HhHHHHh----
Confidence            478999999998 9999999999999999 89999999887766666552        111  122   2233322    


Q ss_pred             HHcCCccEEEeCCCCC
Q 044485           88 TQYGKLDIMFNNAGTV  103 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~  103 (257)
                         ...|+||++.+..
T Consensus       226 ---~~aDvVi~at~~~  238 (404)
T 1gpj_A          226 ---ARSDVVVSATAAP  238 (404)
T ss_dssp             ---HTCSEEEECCSSS
T ss_pred             ---cCCCEEEEccCCC
Confidence               2589999997643

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.59  E-value=0.00012  Score=59.88  Aligned_cols=76  Identities=17%  Similarity=0.212  Sum_probs=57.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++.. .    .+..+  ++.+.   .      
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~----~~~~~--~~~~l---~------  178 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-S----RLRIS--RYEAL---E------  178 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-T----TEEEE--CSGGG---T------
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-C----CeeEe--eHHHh---c------
Confidence            3578999999998 7999999999999996 899999999998888888754 1    13332  22221   1      


Q ss_pred             HHHcCCccEEEeCCCCC
Q 044485           87 VTQYGKLDIMFNNAGTV  103 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~  103 (257)
                       .  ...|+|||+....
T Consensus       179 -~--~~~DivInaTp~g  192 (272)
T 3pwz_A          179 -G--QSFDIVVNATSAS  192 (272)
T ss_dssp             -T--CCCSEEEECSSGG
T ss_pred             -c--cCCCEEEECCCCC
Confidence             0  3689999997653

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.58  E-value=2.4e-05  Score=64.13  Aligned_cols=44  Identities=16%  Similarity=0.089  Sum_probs=38.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVC   53 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~   53 (257)
                      ++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+.++.+++.
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la  158 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS  158 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            578899999997 7999999999999999 7999999987765543

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.57  E-value=0.00077  Score=56.56  Aligned_cols=103  Identities=19%  Similarity=0.218  Sum_probs=60.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcC--CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHG--AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .++++||||+|.+|.+++..|+.+|  ..|++.+++++  +....++...... .++.   . +.+..+..+.+      
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~-~~v~---~-~~~t~d~~~al------   74 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTG-AVVR---G-FLGQQQLEAAL------   74 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSS-CEEE---E-EESHHHHHHHH------
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhccccc-ceEE---E-EeCCCCHHHHc------
Confidence            3689999999999999999999998  67999988765  2222223221100 0111   1 22233443333      


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML  136 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  136 (257)
                       .+.|++|+++|......     .+.   ...+..|+.....+...+
T Consensus        75 -~gaDvVi~~ag~~~~~g-----~~r---~dl~~~N~~~~~~i~~~i  112 (326)
T 1smk_A           75 -TGMDLIIVPAGVPRKPG-----MTR---DDLFKINAGIVKTLCEGI  112 (326)
T ss_dssp             -TTCSEEEECCCCCCCSS-----CCC---SHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCEEEEcCCcCCCCC-----CCH---HHHHHHHHHHHHHHHHHH
Confidence             37999999999754311     111   123556666555554433

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.57  E-value=0.00014  Score=61.94  Aligned_cols=78  Identities=17%  Similarity=0.239  Sum_probs=54.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|+++||+| +|++|...++.+...|++|+++++++++++.+ +++..       -.+  .| .+.+++.+.+.++... 
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa-------~~v--i~-~~~~~~~~~v~~~~~g-  255 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FALGA-------DHG--IN-RLEEDWVERVYALTGD-  255 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTC-------SEE--EE-TTTSCHHHHHHHHHTT-
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHcCC-------CEE--Ec-CCcccHHHHHHHHhCC-
Confidence            678999999 89999999999999999999999998877654 33421       112  34 3333333333333221 


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                      .++|++|+++|
T Consensus       256 ~g~D~vid~~g  266 (363)
T 3uog_A          256 RGADHILEIAG  266 (363)
T ss_dssp             CCEEEEEEETT
T ss_pred             CCceEEEECCC
Confidence            26999999998

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.55  E-value=0.00014  Score=61.51  Aligned_cols=77  Identities=21%  Similarity=0.298  Sum_probs=54.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .|+++||+|+ |++|..+++.+...|+ +|+++++++++++.+. ++.        .. ...|..+.+-.    +++.+.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~G--------a~-~~~~~~~~~~~----~~v~~~  231 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVG--------AD-YVINPFEEDVV----KEVMDI  231 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHT--------CS-EEECTTTSCHH----HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhC--------CC-EEECCCCcCHH----HHHHHH
Confidence            7889999999 9999999999999999 8999999887765543 332        11 12355443322    223322


Q ss_pred             c--CCccEEEeCCCC
Q 044485           90 Y--GKLDIMFNNAGT  102 (257)
Q Consensus        90 ~--~~id~lv~~ag~  102 (257)
                      .  .++|++|+++|.
T Consensus       232 ~~g~g~D~vid~~g~  246 (348)
T 2d8a_A          232 TDGNGVDVFLEFSGA  246 (348)
T ss_dssp             TTTSCEEEEEECSCC
T ss_pred             cCCCCCCEEEECCCC
Confidence            2  269999999984

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.55  E-value=0.00067  Score=55.70  Aligned_cols=161  Identities=13%  Similarity=0.033  Sum_probs=87.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhcc--------------------------CC-----C
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGS--------------------------SS-----S   61 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--------------------------~~-----~   61 (257)
                      +++.|.|+ |.+|.++|+.|++.|++|++.+|+++.+++..+.+..                          ..     -
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~   83 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAV   83 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHh
Confidence            57888876 8899999999999999999999999877766554200                          00     0


Q ss_pred             CCCCceeEecCCCCHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhh--hchhhhHHHHHHHhh
Q 044485           62 SASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI--NLVGAFLGRNMLLGV  139 (257)
Q Consensus        62 ~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~--n~~~~~~l~~~~~s~  139 (257)
                      ...++ ++.+-..+.+..+.+++++.+...+=.+++.|.+..          +.+.+.....-  .+.+....    .+ 
T Consensus        84 ~~aDl-Vi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~----------~~~~la~~~~~~~~~ig~h~~----~p-  147 (283)
T 4e12_A           84 KDADL-VIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTL----------LPSDLVGYTGRGDKFLALHFA----NH-  147 (283)
T ss_dssp             TTCSE-EEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS----------CHHHHHHHHSCGGGEEEEEEC----SS-
T ss_pred             ccCCE-EEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCC----------CHHHHHhhcCCCcceEEEccC----CC-
Confidence            01112 233333445566666777665543333455455432          12222222110  01111000    00 


Q ss_pred             hccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH
Q 044485          140 CGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK  190 (257)
Q Consensus       140 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~  190 (257)
                      ....+.........+.......++.+...+++..++++.-.||++-..+..
T Consensus       148 ~~~~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~~g~i~nr~~~  198 (283)
T 4e12_A          148 VWVNNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELKKEKAGYVLNSLLV  198 (283)
T ss_dssp             TTTSCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHH
T ss_pred             cccCceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEecCCCCEEehHHHH
Confidence            000000001123334455566777888888877777767889998766544

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.52  E-value=0.00012  Score=61.97  Aligned_cols=77  Identities=22%  Similarity=0.272  Sum_probs=54.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++++.+.+ + .       -.  ..|..+. ++.+.+.++.  
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a-------~~--v~~~~~~-~~~~~~~~~~--  228 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-A-------DR--LVNPLEE-DLLEVVRRVT--  228 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-C-------SE--EECTTTS-CHHHHHHHHH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-H-------Hh--ccCcCcc-CHHHHHHHhc--
Confidence            7889999999 9999999999999999 89999998776544422 2 1       11  2355443 2333333333  


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      .+++|++|+++|.
T Consensus       229 ~~g~D~vid~~g~  241 (343)
T 2dq4_A          229 GSGVEVLLEFSGN  241 (343)
T ss_dssp             SSCEEEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2469999999984

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.50  E-value=0.00012  Score=61.43  Aligned_cols=75  Identities=15%  Similarity=0.179  Sum_probs=49.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      ++||+|++|++|...++.+...|++|+.+++++++++.+. ++.        .. ..+|..+.+  .+.++++.  .+++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lG--------a~-~~i~~~~~~--~~~~~~~~--~~~~  217 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLG--------AK-EVLAREDVM--AERIRPLD--KQRW  217 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTT--------CS-EEEECC-----------CC--SCCE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcC--------Cc-EEEecCCcH--HHHHHHhc--CCcc
Confidence            7999999999999999999999999999999887765553 332        11 113444432  22222221  1369


Q ss_pred             cEEEeCCCC
Q 044485           94 DIMFNNAGT  102 (257)
Q Consensus        94 d~lv~~ag~  102 (257)
                      |++|+|+|.
T Consensus       218 d~vid~~g~  226 (328)
T 1xa0_A          218 AAAVDPVGG  226 (328)
T ss_dssp             EEEEECSTT
T ss_pred             cEEEECCcH
Confidence            999999984

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.46  E-value=0.00033  Score=59.32  Aligned_cols=81  Identities=16%  Similarity=0.163  Sum_probs=53.7

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC-HHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK-EKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~   88 (257)
                      ..|+++||+|+ |++|...++.+...|++|+++++++++++.+. ++.        .. ...|..+ .+..+++.+ ...
T Consensus       167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lG--------a~-~~~~~~~~~~~~~~i~~-~~~  234 (352)
T 1e3j_A          167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCG--------AD-VTLVVDPAKEEESSIIE-RIR  234 (352)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTT--------CS-EEEECCTTTSCHHHHHH-HHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhC--------CC-EEEcCcccccHHHHHHH-Hhc
Confidence            35789999997 89999999999999999999999887765543 331        11 1234443 222333222 211


Q ss_pred             --HcCCccEEEeCCCC
Q 044485           89 --QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 --~~~~id~lv~~ag~  102 (257)
                        .-+++|++|+++|.
T Consensus       235 ~~~g~g~D~vid~~g~  250 (352)
T 1e3j_A          235 SAIGDLPNVTIDCSGN  250 (352)
T ss_dssp             HHSSSCCSEEEECSCC
T ss_pred             cccCCCCCEEEECCCC
Confidence              01369999999984

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.45  E-value=0.00032  Score=59.67  Aligned_cols=38  Identities=11%  Similarity=0.126  Sum_probs=33.8

Q ss_pred             CC-cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh
Q 044485           11 QG-KVALITGGARGIGECTARLFSKHGAKVLIADIKDDL   48 (257)
Q Consensus        11 ~~-k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   48 (257)
                      .| .++||+|++|++|...++.+...|++|+.+.++.+.
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            56 899999999999999999988899999988877655

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.44  E-value=0.00061  Score=55.45  Aligned_cols=43  Identities=21%  Similarity=0.169  Sum_probs=39.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHh
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI   56 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~   56 (257)
                      +|+++|.|+ ||.|++++..|++.|.+|+++.|+.++.+++. ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            799999997 99999999999999988999999998888777 55

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.43  E-value=0.00038  Score=59.50  Aligned_cols=80  Identities=16%  Similarity=0.260  Sum_probs=54.9

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC-HHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK-EKDIENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~   87 (257)
                      ..|+++||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++.        .. ...|..+ .+++.+.+.++.
T Consensus       191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lG--------a~-~vi~~~~~~~~~~~~~~~~~  259 (374)
T 1cdo_A          191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFG--------AT-DFVNPNDHSEPISQVLSKMT  259 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTT--------CC-EEECGGGCSSCHHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhC--------Cc-eEEeccccchhHHHHHHHHh
Confidence            35789999996 9999999999999999 7999999888776543 332        11 1134432 123434344433


Q ss_pred             HHcCCccEEEeCCCC
Q 044485           88 TQYGKLDIMFNNAGT  102 (257)
Q Consensus        88 ~~~~~id~lv~~ag~  102 (257)
                      .  +++|++|+++|.
T Consensus       260 ~--~g~D~vid~~g~  272 (374)
T 1cdo_A          260 N--GGVDFSLECVGN  272 (374)
T ss_dssp             T--SCBSEEEECSCC
T ss_pred             C--CCCCEEEECCCC
Confidence            2  479999999984

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.42  E-value=0.00099  Score=57.55  Aligned_cols=43  Identities=19%  Similarity=0.222  Sum_probs=38.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      .+.+++++|+|+ |.+|..+++.+...|++|++++++.+.++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            467899999997 8999999999999999999999998876655

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.41  E-value=0.00035  Score=58.87  Aligned_cols=78  Identities=18%  Similarity=0.242  Sum_probs=55.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..|+++||+|+ |++|...++.+...|++|+.+++++++++.+ +++..        . ...|..+.+..+.+.    +.
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa--------~-~~i~~~~~~~~~~~~----~~  229 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRLGA--------E-VAVNARDTDPAAWLQ----KE  229 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTC--------S-EEEETTTSCHHHHHH----HH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCC--------C-EEEeCCCcCHHHHHH----Hh
Confidence            36789999997 8999999999999999999999988876644 33321        1 123555544333322    23


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      .+++|++|.++|.
T Consensus       230 ~g~~d~vid~~g~  242 (340)
T 3s2e_A          230 IGGAHGVLVTAVS  242 (340)
T ss_dssp             HSSEEEEEESSCC
T ss_pred             CCCCCEEEEeCCC
Confidence            4689999999873

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.38  E-value=0.001  Score=56.38  Aligned_cols=80  Identities=20%  Similarity=0.329  Sum_probs=53.5

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCC--CHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT--KEKDIENAVNTA   86 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~v~~~~~~~   86 (257)
                      ..|+++||+|+ |++|...++.+...|+ +|+++++++++++.+. ++.        .. ...|..  +.++..+.+.+.
T Consensus       170 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lG--------a~-~vi~~~~~~~~~~~~~i~~~  238 (356)
T 1pl8_A          170 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIG--------AD-LVLQISKESPQEIARKVEGQ  238 (356)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTT--------CS-EEEECSSCCHHHHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhC--------CC-EEEcCcccccchHHHHHHHH
Confidence            35789999996 8999999999888999 8999999887665443 332        11 123444  223332222222


Q ss_pred             HHHcCCccEEEeCCCC
Q 044485           87 VTQYGKLDIMFNNAGT  102 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~  102 (257)
                      ..  +++|++|.++|.
T Consensus       239 ~~--~g~D~vid~~g~  252 (356)
T 1pl8_A          239 LG--CKPEVTIECTGA  252 (356)
T ss_dssp             HT--SCCSEEEECSCC
T ss_pred             hC--CCCCEEEECCCC
Confidence            22  479999999984

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.38  E-value=0.00055  Score=58.46  Aligned_cols=74  Identities=18%  Similarity=0.308  Sum_probs=54.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|.++||+|+ |++|...++.+...|++|+++++++++++.+. ++..        . ...|..+.+.+++    +.   
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lGa--------~-~vi~~~~~~~~~~----~~---  255 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGA--------D-EVVNSRNADEMAA----HL---  255 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTC--------S-EEEETTCHHHHHT----TT---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCC--------c-EEeccccHHHHHH----hh---
Confidence            5789999998 89999999999899999999999888776554 3421        1 1245555543322    22   


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                      +++|++|.++|.
T Consensus       256 ~g~Dvvid~~g~  267 (369)
T 1uuf_A          256 KSFDFILNTVAA  267 (369)
T ss_dssp             TCEEEEEECCSS
T ss_pred             cCCCEEEECCCC
Confidence            479999999985

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.37  E-value=0.00039  Score=59.58  Aligned_cols=81  Identities=20%  Similarity=0.356  Sum_probs=55.9

Q ss_pred             cCCcEEEEec-CCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITG-GARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItG-as~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ..+.++||.| |+|++|...++.+...|++|+.+++++++++.+.+ +..     .  .+  .|..+.+-.++ +.++..
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa-----~--~~--~~~~~~~~~~~-v~~~t~  237 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-QGA-----V--HV--CNAASPTFMQD-LTEALV  237 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-TTC-----S--CE--EETTSTTHHHH-HHHHHH
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-CCC-----c--EE--EeCCChHHHHH-HHHHhc
Confidence            3578899997 89999999999999999999999998877655543 321     1  11  34444433333 333322


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                      . .++|++|.|+|.
T Consensus       238 ~-~g~d~v~d~~g~  250 (379)
T 3iup_A          238 S-TGATIAFDATGG  250 (379)
T ss_dssp             H-HCCCEEEESCEE
T ss_pred             C-CCceEEEECCCc
Confidence            2 269999999985

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.37  E-value=0.00086  Score=57.45  Aligned_cols=78  Identities=17%  Similarity=0.224  Sum_probs=53.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcC-CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCC--CHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT--KEKDIENAVNTAV   87 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~v~~~~~~~~   87 (257)
                      .|+++||+| +|++|...++.+...| ++|+++++++++++.+. ++..       -.+  .|..  +.+++.   +++.
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lGa-------~~v--i~~~~~~~~~~~---~~v~  260 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGA-------DLT--LNRRETSVEERR---KAIM  260 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTC-------SEE--EETTTSCHHHHH---HHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HcCC-------cEE--EeccccCcchHH---HHHH
Confidence            578999999 8999999999999999 59999999887765543 3321       112  2333  233333   3333


Q ss_pred             HHc-C-CccEEEeCCCC
Q 044485           88 TQY-G-KLDIMFNNAGT  102 (257)
Q Consensus        88 ~~~-~-~id~lv~~ag~  102 (257)
                      +.. + ++|++|+++|.
T Consensus       261 ~~~~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          261 DITHGRGADFILEATGD  277 (380)
T ss_dssp             HHTTTSCEEEEEECSSC
T ss_pred             HHhCCCCCcEEEECCCC
Confidence            332 2 69999999984

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.36  E-value=0.00048  Score=58.55  Aligned_cols=77  Identities=19%  Similarity=0.319  Sum_probs=54.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKH-GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .|.++||+|+ |++|...++.+... |++|+.+++++++++.+. ++..       -.  ..|..+.  +.+.+.++.. 
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~lGa-------~~--vi~~~~~--~~~~v~~~~~-  251 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGA-------DH--VVDARRD--PVKQVMELTR-  251 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTC-------SE--EEETTSC--HHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCC-------CE--EEeccch--HHHHHHHHhC-
Confidence            6789999999 89999999999888 999999999887765553 3321       11  2355443  3333333321 


Q ss_pred             cC-CccEEEeCCCC
Q 044485           90 YG-KLDIMFNNAGT  102 (257)
Q Consensus        90 ~~-~id~lv~~ag~  102 (257)
                       + ++|++|.++|.
T Consensus       252 -g~g~Dvvid~~G~  264 (359)
T 1h2b_A          252 -GRGVNVAMDFVGS  264 (359)
T ss_dssp             -TCCEEEEEESSCC
T ss_pred             -CCCCcEEEECCCC
Confidence             3 69999999984

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.36  E-value=0.00078  Score=57.51  Aligned_cols=79  Identities=13%  Similarity=0.116  Sum_probs=53.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..|+++||.|++|++|...++.+...|++|+.+. ++++++ ..+++..       -.  ..|..+.+..+. +.++.  
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~lGa-------~~--vi~~~~~~~~~~-v~~~t--  228 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSRGA-------EE--VFDYRAPNLAQT-IRTYT--  228 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHTTC-------SE--EEETTSTTHHHH-HHHHT--
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHcCC-------cE--EEECCCchHHHH-HHHHc--
Confidence            5688999999999999999999999999998886 455544 3344421       11  235554432222 22221  


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      .+++|++|.++|.
T Consensus       229 ~g~~d~v~d~~g~  241 (371)
T 3gqv_A          229 KNNLRYALDCITN  241 (371)
T ss_dssp             TTCCCEEEESSCS
T ss_pred             cCCccEEEECCCc
Confidence            2469999999984

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.35  E-value=0.00026  Score=60.20  Aligned_cols=74  Identities=22%  Similarity=0.246  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCH-HHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKE-KDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~~~   89 (257)
                      .|+++||+|+ |++|...++.+...|++|+.+++++++++.+.+ +..       -.+  .|..+. +..    +++.  
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-lGa-------~~v--~~~~~~~~~~----~~~~--  241 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGA-------DHY--IATLEEGDWG----EKYF--  241 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTC-------SEE--EEGGGTSCHH----HHSC--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCC-------CEE--EcCcCchHHH----HHhh--
Confidence            5789999999 999999999999999999999998887765543 421       112  233332 222    2222  


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                       +++|++|.++|.
T Consensus       242 -~~~D~vid~~g~  253 (360)
T 1piw_A          242 -DTFDLIVVCASS  253 (360)
T ss_dssp             -SCEEEEEECCSC
T ss_pred             -cCCCEEEECCCC
Confidence             579999999986

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.34  E-value=0.00045  Score=59.03  Aligned_cols=79  Identities=22%  Similarity=0.339  Sum_probs=53.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC-HHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK-EKDIENAVNTAVT   88 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~   88 (257)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++.        .. ...|..+ .+++.+.+.++..
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lG--------a~-~vi~~~~~~~~~~~~~~~~~~  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVG--------AT-ECVNPQDYKKPIQEVLTEMSN  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTT--------CS-EEECGGGCSSCHHHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhC--------Cc-eEecccccchhHHHHHHHHhC
Confidence            5789999995 9999999999999999 7999999888766543 332        11 1134432 1223333333322


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                        +++|++|+++|.
T Consensus       260 --~g~D~vid~~g~  271 (374)
T 2jhf_A          260 --GGVDFSFEVIGR  271 (374)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCcEEEECCCC
Confidence              479999999984

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.32  E-value=0.00059  Score=58.32  Aligned_cols=79  Identities=18%  Similarity=0.280  Sum_probs=54.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC-HHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK-EKDIENAVNTAVT   88 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~   88 (257)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++.        .. ...|..+ .+++.+.+.++..
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lG--------a~-~vi~~~~~~~~~~~~v~~~~~  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-ALG--------AT-DCLNPRELDKPVQDVITELTA  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTT--------CS-EEECGGGCSSCHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhC--------Cc-EEEccccccchHHHHHHHHhC
Confidence            5789999996 9999999999999999 7999999888765543 332        11 1134432 1223333333322


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                        +++|++|.++|.
T Consensus       264 --~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 --GGVDYSLDCAGT  275 (376)
T ss_dssp             --SCBSEEEESSCC
T ss_pred             --CCccEEEECCCC
Confidence              479999999984

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.31  E-value=0.00053  Score=58.53  Aligned_cols=80  Identities=21%  Similarity=0.292  Sum_probs=54.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC-HHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK-EKDIENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~   87 (257)
                      ..|+++||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++..       -.  ..|..+ .+++.+.+.++.
T Consensus       189 ~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa-------~~--vi~~~~~~~~~~~~v~~~~  257 (373)
T 2fzw_A          189 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGA-------TE--CINPQDFSKPIQEVLIEMT  257 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTC-------SE--EECGGGCSSCHHHHHHHHT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCC-------ce--EeccccccccHHHHHHHHh
Confidence            35789999996 9999999999998999 7999999888766553 3421       11  134332 122333333332


Q ss_pred             HHcCCccEEEeCCCC
Q 044485           88 TQYGKLDIMFNNAGT  102 (257)
Q Consensus        88 ~~~~~id~lv~~ag~  102 (257)
                      .  +++|++|+++|.
T Consensus       258 ~--~g~D~vid~~g~  270 (373)
T 2fzw_A          258 D--GGVDYSFECIGN  270 (373)
T ss_dssp             T--SCBSEEEECSCC
T ss_pred             C--CCCCEEEECCCc
Confidence            2  479999999984

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.31  E-value=0.00037  Score=59.18  Aligned_cols=76  Identities=17%  Similarity=0.271  Sum_probs=54.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|.++||+|+ |++|...++.+...|++|+++++++++++.+.+++..     .  .+  .|..+.+.++       +..
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa-----~--~v--i~~~~~~~~~-------~~~  242 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGA-----D--DY--VIGSDQAKMS-------ELA  242 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCC-----S--CE--EETTCHHHHH-------HST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCC-----c--ee--eccccHHHHH-------Hhc
Confidence            6889999995 9999999999999999999999988776555433321     1  11  3444543322       222


Q ss_pred             CCccEEEeCCCCC
Q 044485           91 GKLDIMFNNAGTV  103 (257)
Q Consensus        91 ~~id~lv~~ag~~  103 (257)
                      +++|++|.++|..
T Consensus       243 ~g~D~vid~~g~~  255 (357)
T 2cf5_A          243 DSLDYVIDTVPVH  255 (357)
T ss_dssp             TTEEEEEECCCSC
T ss_pred             CCCCEEEECCCCh
Confidence            4799999999853

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.31  E-value=0.00041  Score=58.91  Aligned_cols=75  Identities=21%  Similarity=0.426  Sum_probs=52.5

Q ss_pred             CCcEEEEecCCCchHHHH-HHHH-HHcCCe-EEEeeCcch---hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECT-ARLF-SKHGAK-VLIADIKDD---LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus        11 ~~k~~lItGas~giG~~i-a~~l-~~~g~~-Vi~~~r~~~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      +++++||+|+ |++|... ++.+ ...|++ |+.++++++   +++.+ +++.        +..+  |..+.+ +.+ +.
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~lG--------a~~v--~~~~~~-~~~-i~  237 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EELD--------ATYV--DSRQTP-VED-VP  237 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHTT--------CEEE--ETTTSC-GGG-HH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHcC--------Cccc--CCCccC-HHH-HH
Confidence            3489999999 9999999 8877 778998 999999877   65544 3332        2333  554432 223 33


Q ss_pred             HHHHHcCCccEEEeCCCC
Q 044485           85 TAVTQYGKLDIMFNNAGT  102 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~  102 (257)
                      ++   .+++|++|.++|.
T Consensus       238 ~~---~gg~Dvvid~~g~  252 (357)
T 2b5w_A          238 DV---YEQMDFIYEATGF  252 (357)
T ss_dssp             HH---SCCEEEEEECSCC
T ss_pred             Hh---CCCCCEEEECCCC
Confidence            33   2479999999984

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.28  E-value=0.0005  Score=58.54  Aligned_cols=78  Identities=22%  Similarity=0.339  Sum_probs=52.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHH-cCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSK-HGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~-~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .|+++||+||+|++|...++.+.. .|++|+.+++++++++.+. ++.        .. ...|..+  ++.+.+.++  .
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~lG--------ad-~vi~~~~--~~~~~v~~~--~  236 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SLG--------AH-HVIDHSK--PLAAEVAAL--G  236 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HTT--------CS-EEECTTS--CHHHHHHTT--C
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-HcC--------CC-EEEeCCC--CHHHHHHHh--c
Confidence            578999999999999998887776 5899999999887765543 332        11 1134433  222222222  2


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      .+++|++|.|+|.
T Consensus       237 ~~g~Dvvid~~g~  249 (363)
T 4dvj_A          237 LGAPAFVFSTTHT  249 (363)
T ss_dssp             SCCEEEEEECSCH
T ss_pred             CCCceEEEECCCc
Confidence            2479999999984

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.26  E-value=0.00032  Score=60.03  Aligned_cols=79  Identities=23%  Similarity=0.317  Sum_probs=54.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC-HHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK-EKDIENAVNTAVT   88 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~   88 (257)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++++.+ +++.        .. ...|..+ .+++.+.+.++..
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~lG--------a~-~vi~~~~~~~~~~~~i~~~~~  261 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKFG--------VN-EFVNPKDHDKPIQEVIVDLTD  261 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTTT--------CC-EEECGGGCSSCHHHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcC--------Cc-EEEccccCchhHHHHHHHhcC
Confidence            5789999998 9999999999999999 799999988876643 3332        11 1234332 2233333333322


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                        +++|++|.++|.
T Consensus       262 --gg~D~vid~~g~  273 (378)
T 3uko_A          262 --GGVDYSFECIGN  273 (378)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              379999999984

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.26  E-value=0.0033  Score=53.56  Aligned_cols=86  Identities=19%  Similarity=0.226  Sum_probs=58.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCC-----------CCHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDV-----------TKEK   77 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~-----------~~~~   77 (257)
                      .+.+++++|.|+ |.+|..+++.+...|++|++.+|+.+.++...+ +.        ..++..|+           ...+
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lG--------a~~~~l~~~~~~~~gya~~~~~~  250 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VG--------AQWLDLGIDAAGEGGYARELSEA  250 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TT--------CEECCCC-------------CHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC--------CeEEeccccccccccchhhhhHH
Confidence            357899999999 899999999999999999999999987766644 21        22222221           0111


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCCCCC
Q 044485           78 DIENAVNTAVTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        78 ~v~~~~~~~~~~~~~id~lv~~ag~~~  104 (257)
                      ........+.+.....|++|+++....
T Consensus       251 ~~~~~~~~l~e~l~~aDIVI~tv~iPg  277 (381)
T 3p2y_A          251 ERAQQQQALEDAITKFDIVITTALVPG  277 (381)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEECCCCTT
T ss_pred             HHhhhHHHHHHHHhcCCEEEECCCCCC
Confidence            122233444455568999999886543

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.25  E-value=0.00046  Score=57.68  Aligned_cols=75  Identities=24%  Similarity=0.367  Sum_probs=51.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..|+++||+||+|++|...++.+...|++|+.++++.. + +..+++..        . ...|..+.+.+.+.       
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~-~-~~~~~lGa--------~-~~i~~~~~~~~~~~-------  212 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN-H-AFLKALGA--------E-QCINYHEEDFLLAI-------  212 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH-H-HHHHHHTC--------S-EEEETTTSCHHHHC-------
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch-H-HHHHHcCC--------C-EEEeCCCcchhhhh-------
Confidence            46789999999999999999999999999998875443 3 34444421        1 12344444322221       


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      ..++|++|.++|.
T Consensus       213 ~~g~D~v~d~~g~  225 (321)
T 3tqh_A          213 STPVDAVIDLVGG  225 (321)
T ss_dssp             CSCEEEEEESSCH
T ss_pred             ccCCCEEEECCCc
Confidence            1479999999983

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.24  E-value=0.00043  Score=59.15  Aligned_cols=81  Identities=23%  Similarity=0.356  Sum_probs=53.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH-
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV-   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~-   87 (257)
                      ..|+++||+|+ |++|...++.+...|+ +|+++++++++++. .+++..        . ...|.++.+..+. +.+.. 
T Consensus       181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~lGa--------~-~vi~~~~~~~~~~-i~~~~~  248 (370)
T 4ej6_A          181 KAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL-AEEVGA--------T-ATVDPSAGDVVEA-IAGPVG  248 (370)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-HHHHTC--------S-EEECTTSSCHHHH-HHSTTS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHcCC--------C-EEECCCCcCHHHH-HHhhhh
Confidence            35789999998 9999999999999999 78988888776653 344421        1 1245554433222 22210 


Q ss_pred             HHcCCccEEEeCCCC
Q 044485           88 TQYGKLDIMFNNAGT  102 (257)
Q Consensus        88 ~~~~~id~lv~~ag~  102 (257)
                      ...+++|++|.++|.
T Consensus       249 ~~~gg~Dvvid~~G~  263 (370)
T 4ej6_A          249 LVPGGVDVVIECAGV  263 (370)
T ss_dssp             SSTTCEEEEEECSCC
T ss_pred             ccCCCCCEEEECCCC
Confidence            112479999999984

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.21  E-value=0.0024  Score=53.00  Aligned_cols=101  Identities=16%  Similarity=0.109  Sum_probs=61.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEeeC--cchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           14 VALITGGARGIGECTARLFSKHGA--KVLIADI--KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r--~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +++||||+|.+|.+++..|+..|.  .+++.++  +++.++....++.........+.+.. +  +.+.           
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a-----------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED-----------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH-----------
Confidence            799999999999999999999885  5888888  66544332233322100001122222 2  2221           


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML  136 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  136 (257)
                      +.+.|++|+.||.....     ..+..   ..+..|+.....+...+
T Consensus        68 ~~~aDvVi~~ag~~~~~-----g~~r~---dl~~~N~~i~~~i~~~i  106 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP-----GQTRI---DLAGDNAPIMEDIQSSL  106 (303)
T ss_dssp             GTTCSEEEECCCCCCCT-----TCCHH---HHHHHHHHHHHHHHHHH
T ss_pred             hCCCCEEEEcCCCCCCC-----CCCHH---HHHHHHHHHHHHHHHHH
Confidence            23799999999975321     22332   34677777777665544

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.20  E-value=0.0015  Score=54.51  Aligned_cols=138  Identities=13%  Similarity=0.078  Sum_probs=75.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEeeC--cchhhHhHHHHhccC-CCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           14 VALITGGARGIGECTARLFSKHGA--KVLIADI--KDDLGESVCKDIGSS-SSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r--~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +++||||+|.+|.+++..|+..|.  .+++.++  +.+.++....++... .-.+..+.+...|    +++.+       
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~-------   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLR-------   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGG-------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHH-------
Confidence            699999999999999999999884  4888888  654343222222110 0000112222111    11111       


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh-------------------ccccCCCCc
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC-------------------GIIGGAATH  149 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~-------------------~~~~~~~~~  149 (257)
                      .+.+.|++|+.||.....     ..+.   ...+..|+.....+...+....                   ...+.+...
T Consensus        71 al~gaD~Vi~~Ag~~~~~-----g~~r---~dl~~~N~~i~~~i~~~i~~~~~~~vlv~SNPv~~~t~~~~k~~~~p~~r  142 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKE-----GMSR---MDLAKTNAKIVGKYAKKIAEICDTKIFVITNPVDVMTYKALVDSKFERNQ  142 (313)
T ss_dssp             GGTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHHCCCEEEECSSSHHHHHHHHHHHHCCCTTS
T ss_pred             HhCCCCEEEECCCCCCCC-----CCcH---HHHHHHHHHHHHHHHHHHHHhCCeEEEEecCcHHHHHHHHHHhhCcChhc
Confidence            223799999999975421     2232   3346777777666654442211                   111233334


Q ss_pred             hhhh-hHHHHHHHHHHHHHHhc
Q 044485          150 AYTS-SKHGLLGLMKNTAVELG  170 (257)
Q Consensus       150 ~y~~-sK~a~~~~~~~l~~e~~  170 (257)
                      .++. +..-...+-+.+++.+.
T Consensus       143 viG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          143 VFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             EEECTTHHHHHHHHHHHHHHHT
T ss_pred             EEEeCccHHHHHHHHHHHHHhC
Confidence            4555 55545566666676653

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.20  E-value=0.0005  Score=54.68  Aligned_cols=72  Identities=18%  Similarity=0.194  Sum_probs=54.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      .+.++|.|+ |.+|..+++.|.+.|+ |++++++++..++..     .     .+.++.+|.++++.++++      ...
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~-----~~~~i~gd~~~~~~l~~a------~i~   70 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S-----GANFVHGDPTRVSDLEKA------NVR   70 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T-----TCEEEESCTTCHHHHHHT------TCT
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c-----CCeEEEcCCCCHHHHHhc------Ccc
Confidence            467899997 8999999999999999 999999887655443     1     167889999998766543      113


Q ss_pred             CccEEEeCCC
Q 044485           92 KLDIMFNNAG  101 (257)
Q Consensus        92 ~id~lv~~ag  101 (257)
                      ..|.+|.+.+
T Consensus        71 ~ad~vi~~~~   80 (234)
T 2aef_A           71 GARAVIVDLE   80 (234)
T ss_dssp             TCSEEEECCS
T ss_pred             hhcEEEEcCC
Confidence            6788887765

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.16  E-value=0.00066  Score=54.78  Aligned_cols=83  Identities=18%  Similarity=0.288  Sum_probs=55.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcc-------------------hhhHhHHHHhccCCCCCCCcee
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKD-------------------DLGESVCKDIGSSSSSASGCSY   68 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~v~~   68 (257)
                      .+.+++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+..+ ..++..
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~v~~  102 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNP-DIQLTA  102 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCC-CCEEEE
Confidence            467889999998 7899999999999997 488876543                   344445555544322 233555


Q ss_pred             EecCCCCHHHHHHHHHHHHHHcCCccEEEeCCC
Q 044485           69 VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        69 ~~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag  101 (257)
                      +..+++ .+.+.++++       ..|+||++..
T Consensus       103 ~~~~~~-~~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          103 LQQRLT-GEALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             ECSCCC-HHHHHHHHH-------HCSEEEECCS
T ss_pred             EeccCC-HHHHHHHHh-------cCCEEEECCC
Confidence            555554 344444443       4789998865

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.16  E-value=0.00079  Score=58.19  Aligned_cols=78  Identities=23%  Similarity=0.390  Sum_probs=54.2

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ..|.++||+|+ |++|...++.+...|+ +|+++++++++++.+ +++..        . ...|..+.+..    +++.+
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lGa--------~-~vi~~~~~~~~----~~i~~  276 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELGA--------D-HVIDPTKENFV----EAVLD  276 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHTC--------S-EEECTTTSCHH----HHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCC--------C-EEEcCCCCCHH----HHHHH
Confidence            36789999998 9999999999999999 799999888776544 44421        1 12344444322    23333


Q ss_pred             Hc-C-CccEEEeCCCC
Q 044485           89 QY-G-KLDIMFNNAGT  102 (257)
Q Consensus        89 ~~-~-~id~lv~~ag~  102 (257)
                      .. + ++|++|.++|.
T Consensus       277 ~t~g~g~D~vid~~g~  292 (404)
T 3ip1_A          277 YTNGLGAKLFLEATGV  292 (404)
T ss_dssp             HTTTCCCSEEEECSSC
T ss_pred             HhCCCCCCEEEECCCC
Confidence            22 2 69999999984

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.16  E-value=0.00085  Score=57.27  Aligned_cols=79  Identities=18%  Similarity=0.253  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC-HHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK-EKDIENAVNTAVT   88 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~~   88 (257)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++.        +. ...|..+ .+++.+.+.++..
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lG--------a~-~vi~~~~~~~~~~~~i~~~t~  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELG--------AT-ECLNPKDYDKPIYEVICEKTN  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTT--------CS-EEECGGGCSSCHHHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcC--------Cc-EEEecccccchHHHHHHHHhC
Confidence            5789999996 9999999999888999 7999998887765543 332        11 1133332 1223333333322


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                        +++|++|.++|.
T Consensus       260 --gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 --GGVDYAVECAGR  271 (373)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              479999999984

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.16  E-value=0.00059  Score=57.71  Aligned_cols=71  Identities=18%  Similarity=0.287  Sum_probs=52.1

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -.|+++||+|+ |++|...++.+...|++|+++++++++++.+. ++..       -.++    ++.+.+.+        
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa-------~~v~----~~~~~~~~--------  233 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SMGV-------KHFY----TDPKQCKE--------  233 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-HTTC-------SEEE----SSGGGCCS--------
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCC-------Ceec----CCHHHHhc--------
Confidence            36889999997 99999999999999999999999988776543 3321       1122    34433221        


Q ss_pred             cCCccEEEeCCCCC
Q 044485           90 YGKLDIMFNNAGTV  103 (257)
Q Consensus        90 ~~~id~lv~~ag~~  103 (257)
                        ++|++|.++|..
T Consensus       234 --~~D~vid~~g~~  245 (348)
T 3two_A          234 --ELDFIISTIPTH  245 (348)
T ss_dssp             --CEEEEEECCCSC
T ss_pred             --CCCEEEECCCcH
Confidence              699999999853

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.16  E-value=0.00057  Score=57.67  Aligned_cols=77  Identities=13%  Similarity=0.177  Sum_probs=53.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHc--CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKH--GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .|+++||+|+ |++|...++.+...  |++|+.+++++++++.+. ++..       -.+  .|..+.   +..++++.+
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lGa-------~~v--i~~~~~---~~~~~~~~~  235 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELGA-------DYV--SEMKDA---ESLINKLTD  235 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHTC-------SEE--ECHHHH---HHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhCC-------CEE--eccccc---hHHHHHhhc
Confidence            6899999999 89999999999989  999999999887765553 3321       111  232220   122333332


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                       -.++|++|.++|.
T Consensus       236 -g~g~D~vid~~g~  248 (344)
T 2h6e_A          236 -GLGASIAIDLVGT  248 (344)
T ss_dssp             -TCCEEEEEESSCC
T ss_pred             -CCCccEEEECCCC
Confidence             1269999999984

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.11  E-value=0.00054  Score=56.22  Aligned_cols=45  Identities=7%  Similarity=0.250  Sum_probs=39.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCK   54 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~   54 (257)
                      ++.+|+++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+++.+
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            578999999998 7999999999999998 79999999887666644

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=97.10  E-value=0.0011  Score=57.07  Aligned_cols=80  Identities=15%  Similarity=0.226  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .|+++||.|+ |++|...++.+...|+ .|+++++++++++.+ +++   +     +.  .+|.++.+.+.+.+.++.. 
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~l---G-----a~--~i~~~~~~~~~~~v~~~t~-  251 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQ---G-----FE--IADLSLDTPLHEQIAALLG-  251 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT---T-----CE--EEETTSSSCHHHHHHHHHS-
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHc---C-----Cc--EEccCCcchHHHHHHHHhC-
Confidence            5789999995 9999999998888999 689999988776555 333   1     22  2354443322222222221 


Q ss_pred             cCCccEEEeCCCCC
Q 044485           90 YGKLDIMFNNAGTV  103 (257)
Q Consensus        90 ~~~id~lv~~ag~~  103 (257)
                      -.++|++|.++|..
T Consensus       252 g~g~Dvvid~~G~~  265 (398)
T 1kol_A          252 EPEVDCAVDAVGFE  265 (398)
T ss_dssp             SSCEEEEEECCCTT
T ss_pred             CCCCCEEEECCCCc
Confidence            12699999999853

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.05  E-value=0.0036  Score=53.81  Aligned_cols=45  Identities=18%  Similarity=0.198  Sum_probs=39.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK   54 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   54 (257)
                      .+.+.+++|.|+ |.+|..+++.+...|++|++++++...++...+
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            467889999999 899999999999999999999999887666544

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.04  E-value=0.00049  Score=55.59  Aligned_cols=44  Identities=7%  Similarity=0.178  Sum_probs=37.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCK   54 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~   54 (257)
                      .+++ +++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+++.+
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~  150 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDF  150 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            4567 8999997 9999999999999998 79999999876655443

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.02  E-value=0.0011  Score=55.19  Aligned_cols=82  Identities=16%  Similarity=0.175  Sum_probs=57.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCce-eEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS-YVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++.+++++|.|++.-+|+.+|+.|+..|++|+++.|+...+.+..+++...      .+ ...+..++++++++.+.   
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~------~~~~t~~~~t~~~~L~e~l~---  244 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLN------KHHVEDLGEYSEDLLKKCSL---  244 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCC------CCEEEEEEECCHHHHHHHHH---
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhh------cccccccccccHhHHHHHhc---
Confidence            789999999999888999999999999999999999855443332222210      11 11111134466666555   


Q ss_pred             HHcCCccEEEeCCCCC
Q 044485           88 TQYGKLDIMFNNAGTV  103 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~  103 (257)
                          .-|+||.+.|..
T Consensus       245 ----~ADIVIsAtg~p  256 (320)
T 1edz_A          245 ----DSDVVITGVPSE  256 (320)
T ss_dssp             ----HCSEEEECCCCT
T ss_pred             ----cCCEEEECCCCC
Confidence                489999999864

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.01  E-value=0.0011  Score=51.72  Aligned_cols=42  Identities=14%  Similarity=0.351  Sum_probs=36.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHH
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKD   55 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~   55 (257)
                      +++|+||+|.+|.++++.|++.|++|++.+|+++..++..+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            688999999999999999999999999999998776665544

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.00  E-value=0.0019  Score=55.39  Aligned_cols=44  Identities=20%  Similarity=0.180  Sum_probs=38.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVC   53 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~   53 (257)
                      .+.+++++|+|+ |++|..+++.+...|++|++++|+...++...
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~  212 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE  212 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            578999999996 89999999999999999999999987765553

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=97.00  E-value=0.00044  Score=58.70  Aligned_cols=37  Identities=11%  Similarity=0.260  Sum_probs=32.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      .|.++||+|++|++|...++.+...|++|+.+.+..+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            6789999999999999999988889999887776544

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.00  E-value=0.0018  Score=54.42  Aligned_cols=37  Identities=16%  Similarity=0.307  Sum_probs=32.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKD   46 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   46 (257)
                      .+.+++|+|.|+ ||+|.++++.|+..|.. +.+++++.
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~   68 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT   68 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence            467889999998 89999999999999975 88887754

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.98  E-value=0.0029  Score=54.49  Aligned_cols=79  Identities=18%  Similarity=0.295  Sum_probs=53.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .|+++||.|+ |++|...++.+...|+ +|+.+++++++++.+. ++   +     ...  +|..+.+.+.+.+.++...
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---G-----a~~--i~~~~~~~~~~~~~~~~~g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-DA---G-----FET--IDLRNSAPLRDQIDQILGK  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-TT---T-----CEE--EETTSSSCHHHHHHHHHSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hc---C-----CcE--EcCCCcchHHHHHHHHhCC
Confidence            6789999997 9999999998888999 8999999887765442 22   2     222  3544432212222222111


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                       .++|++|.++|.
T Consensus       253 -~g~Dvvid~~g~  264 (398)
T 2dph_A          253 -PEVDCGVDAVGF  264 (398)
T ss_dssp             -SCEEEEEECSCT
T ss_pred             -CCCCEEEECCCC
Confidence             269999999985

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.96  E-value=0.0014  Score=57.73  Aligned_cols=75  Identities=13%  Similarity=0.135  Sum_probs=60.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      .++++|.|+ |-+|..+|+.|.++|++|++.+++++.++++.+.+.        +.++.+|.++++.++++=      -.
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~--------~~~i~Gd~~~~~~L~~Ag------i~   67 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYD--------LRVVNGHASHPDVLHEAG------AQ   67 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSS--------CEEEESCTTCHHHHHHHT------TT
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcC--------cEEEEEcCCCHHHHHhcC------CC
Confidence            457899988 899999999999999999999999988887766652        778999999998776651      12


Q ss_pred             CccEEEeCCC
Q 044485           92 KLDIMFNNAG  101 (257)
Q Consensus        92 ~id~lv~~ag  101 (257)
                      ..|++|-..+
T Consensus        68 ~ad~~ia~t~   77 (461)
T 4g65_A           68 DADMLVAVTN   77 (461)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEEcC
Confidence            5788776544

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.94  E-value=0.002  Score=55.80  Aligned_cols=73  Identities=25%  Similarity=0.288  Sum_probs=56.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +.++|.|. |-+|+.+++.|.+.|..|++++++++..++..+.    +     +.++.+|.++++.++++      ....
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~----g-----~~vi~GDat~~~~L~~a------gi~~   68 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF----G-----MKVFYGDATRMDLLESA------GAAK   68 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT----T-----CCCEESCTTCHHHHHHT------TTTT
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC----C-----CeEEEcCCCCHHHHHhc------CCCc
Confidence            56899997 8899999999999999999999998877665431    1     56788899888866554      1125


Q ss_pred             ccEEEeCCC
Q 044485           93 LDIMFNNAG  101 (257)
Q Consensus        93 id~lv~~ag  101 (257)
                      .|+||.+.+
T Consensus        69 A~~viv~~~   77 (413)
T 3l9w_A           69 AEVLINAID   77 (413)
T ss_dssp             CSEEEECCS
T ss_pred             cCEEEECCC
Confidence            778877765

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.91  E-value=0.0026  Score=52.67  Aligned_cols=44  Identities=20%  Similarity=0.240  Sum_probs=38.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      .++.+++++|.|+ |.+|+++++.+...|++|++.+|+.+..+..
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~  196 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARI  196 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            4789999999996 9999999999999999999999988655443

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.88  E-value=0.0041  Score=50.27  Aligned_cols=96  Identities=11%  Similarity=0.236  Sum_probs=59.4

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhcc-----CCCCCCCceeEecCCCCHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGS-----SSSSASGCSYVHCDVTKEKDI   79 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~-----~~~~~~~v~~~~~D~~~~~~v   79 (257)
                      |..++.++++.|.|+ |.+|..+++.|++.|++ |.+.+|+++..++..+.+..     ......++.++..=+ ....+
T Consensus         4 m~~~~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av-~~~~~   81 (266)
T 3d1l_A            4 MKRSIEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSL-KDSAF   81 (266)
T ss_dssp             ---CGGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECC-CHHHH
T ss_pred             hhcCCCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEec-CHHHH
Confidence            444455678999997 99999999999999998 88999998887776654310     000001122222222 34466


Q ss_pred             HHHHHHHHHHcCCccEEEeCCCCC
Q 044485           80 ENAVNTAVTQYGKLDIMFNNAGTV  103 (257)
Q Consensus        80 ~~~~~~~~~~~~~id~lv~~ag~~  103 (257)
                      .++++++.....+=.+++++.+..
T Consensus        82 ~~v~~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           82 AELLQGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHHHHHHTTCCTTCEEEECCTTS
T ss_pred             HHHHHHHHhhcCCCcEEEECCCCC
Confidence            777777755433334677776543

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.87  E-value=0.001  Score=56.58  Aligned_cols=47  Identities=15%  Similarity=0.328  Sum_probs=41.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHh
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI   56 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~   56 (257)
                      ++.||+++|.|. |.+|..+|+.|.+.|++|++.+++.+.+++..++.
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            689999999997 88999999999999999999999988777766654

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.85  E-value=0.0033  Score=51.83  Aligned_cols=44  Identities=27%  Similarity=0.360  Sum_probs=38.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      .++.+++++|.|+ |.+|+++++.+...|++|++.+|+.+..+..
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~  194 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARI  194 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            3688999999995 8999999999999999999999988655433

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.85  E-value=0.0018  Score=55.16  Aligned_cols=77  Identities=14%  Similarity=0.220  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .|+++||+|+ |++|...++.+...|+ .|+.+++++++++.+ +++..       -.+  .|..+.+..    +++.+.
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa-------~~v--i~~~~~~~~----~~~~~~  254 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGA-------THV--INSKTQDPV----AAIKEI  254 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTC-------SEE--EETTTSCHH----HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCC-------CEE--ecCCccCHH----HHHHHh
Confidence            5789999995 9999999999888999 599999988776554 33321       112  244333222    222222


Q ss_pred             c-CCccEEEeCCCC
Q 044485           90 Y-GKLDIMFNNAGT  102 (257)
Q Consensus        90 ~-~~id~lv~~ag~  102 (257)
                      . +++|++|.++|.
T Consensus       255 ~~gg~D~vid~~g~  268 (371)
T 1f8f_A          255 TDGGVNFALESTGS  268 (371)
T ss_dssp             TTSCEEEEEECSCC
T ss_pred             cCCCCcEEEECCCC
Confidence            2 369999999984

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.85  E-value=0.0013  Score=55.65  Aligned_cols=78  Identities=12%  Similarity=0.174  Sum_probs=52.9

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      -.|.++||+|+ |++|...++.+...|+ +|+++++++++++.+ +++..       -.  ..|..+.+..    +++.+
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa-------~~--vi~~~~~~~~----~~v~~  229 (352)
T 3fpc_A          165 KLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEYGA-------TD--IINYKNGDIV----EQILK  229 (352)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHHTC-------CE--EECGGGSCHH----HHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCC-------ce--EEcCCCcCHH----HHHHH
Confidence            35789999985 9999999999998999 699999888766544 33421       11  2344333322    33333


Q ss_pred             Hc-C-CccEEEeCCCC
Q 044485           89 QY-G-KLDIMFNNAGT  102 (257)
Q Consensus        89 ~~-~-~id~lv~~ag~  102 (257)
                      .. + ++|++|.++|.
T Consensus       230 ~t~g~g~D~v~d~~g~  245 (352)
T 3fpc_A          230 ATDGKGVDKVVIAGGD  245 (352)
T ss_dssp             HTTTCCEEEEEECSSC
T ss_pred             HcCCCCCCEEEECCCC
Confidence            32 2 59999999985

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.82  E-value=0.0048  Score=51.03  Aligned_cols=89  Identities=12%  Similarity=0.047  Sum_probs=57.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHh-----ccCCCCCCCceeEecCCCCHHHHHHHH---
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI-----GSSSSSASGCSYVHCDVTKEKDIENAV---   83 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~v~~~~~D~~~~~~v~~~~---   83 (257)
                      .+++.|.|. |.+|.++++.|++.|++|++.+|+++..+++.+.-     ........+..++..=+.+...++.++   
T Consensus         7 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~   85 (303)
T 3g0o_A            7 DFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGE   85 (303)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhCh
Confidence            357888875 99999999999999999999999998777665431     111111112344444455666677665   


Q ss_pred             HHHHHHcCCccEEEeCCC
Q 044485           84 NTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag  101 (257)
                      +++.....+=.++|++..
T Consensus        86 ~~l~~~l~~g~ivv~~st  103 (303)
T 3g0o_A           86 DGVAHLMKPGSAVMVSST  103 (303)
T ss_dssp             CCCGGGSCTTCEEEECSC
T ss_pred             hhHHhhCCCCCEEEecCC
Confidence            444444333346666654

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.81  E-value=0.0029  Score=57.02  Aligned_cols=37  Identities=16%  Similarity=0.307  Sum_probs=32.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKD   46 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   46 (257)
                      .+.+++|+|.|+ ||+|.++++.|+..|.. +.+++++.
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~  360 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT  360 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence            467889999998 89999999999999975 88888754

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.78  E-value=0.0026  Score=52.89  Aligned_cols=69  Identities=12%  Similarity=0.120  Sum_probs=47.6

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -.|+++||+|+ |++|...++.+...|++|+.++ ++++++.+ +++..       -.++  |  |.+   +    +   
T Consensus       141 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~lGa-------~~v~--~--d~~---~----v---  196 (315)
T 3goh_A          141 TKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKRGV-------RHLY--R--EPS---Q----V---  196 (315)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHHTE-------EEEE--S--SGG---G----C---
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHcCC-------CEEE--c--CHH---H----h---
Confidence            36889999999 9999999999999999999998 66665544 33421       1122  3  221   1    1   


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      .+++|++|.++|.
T Consensus       197 ~~g~Dvv~d~~g~  209 (315)
T 3goh_A          197 TQKYFAIFDAVNS  209 (315)
T ss_dssp             CSCEEEEECC---
T ss_pred             CCCccEEEECCCc
Confidence            3479999999985

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.77  E-value=0.002  Score=52.54  Aligned_cols=45  Identities=29%  Similarity=0.324  Sum_probs=38.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      .+++||+++|.|.++-+|+.+++.|..+|++|.++.|+...+++.
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~~  200 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLY  200 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Confidence            478999999999999999999999999999999988765544433

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.74  E-value=0.0014  Score=55.23  Aligned_cols=80  Identities=15%  Similarity=0.120  Sum_probs=51.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +++++.|+|++|.+|..++..++.+|.  +|++.+.++++++-...++........++.+ .   +|.   .+.+     
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d~---~~al-----   74 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SDI---KEAL-----   74 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SCH---HHHH-----
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CCH---HHHh-----
Confidence            457899999999999999999999994  6999999887665444333321111111211 1   121   1112     


Q ss_pred             HcCCccEEEeCCCCCC
Q 044485           89 QYGKLDIMFNNAGTVD  104 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~  104 (257)
                        ...|++|.+||...
T Consensus        75 --~dADvVvitaG~p~   88 (343)
T 3fi9_A           75 --TDAKYIVSSGGAPR   88 (343)
T ss_dssp             --TTEEEEEECCC---
T ss_pred             --CCCCEEEEccCCCC
Confidence              36999999999653

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.73  E-value=0.00039  Score=58.86  Aligned_cols=39  Identities=31%  Similarity=0.497  Sum_probs=34.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL   48 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   48 (257)
                      ++.||++.|.|. |.+|..+++.+.+.|++|++.+++.+.
T Consensus       172 ~L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~~  210 (355)
T 1c1d_A          172 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTER  210 (355)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence            689999999975 999999999999999999988887654

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.72  E-value=0.0052  Score=51.43  Aligned_cols=82  Identities=16%  Similarity=0.178  Sum_probs=54.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ++.+++++.|+|+ |.+|.+++..|+..|.  +|++.+++++.++-...++.....-...+.....   +.         
T Consensus         5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~~---------   71 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---EY---------   71 (326)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---CG---------
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---cH---------
Confidence            3566789999996 9999999999999987  7999999887766554444432110011332221   21         


Q ss_pred             HHHHcCCccEEEeCCCCCC
Q 044485           86 AVTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~  104 (257)
                        +.+...|++|..||...
T Consensus        72 --~a~~~aDiVvi~ag~~~   88 (326)
T 3vku_A           72 --SDAKDADLVVITAGAPQ   88 (326)
T ss_dssp             --GGGTTCSEEEECCCCC-
T ss_pred             --HHhcCCCEEEECCCCCC
Confidence              12347999999999753

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.66  E-value=0.0047  Score=52.02  Aligned_cols=79  Identities=16%  Similarity=0.277  Sum_probs=52.0

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKH-GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ..|.++||.|+ |++|...++.+... |++|+.+++++++++.+. ++..       -.+  .|..+ +..++ +.++..
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~lGa-------~~~--i~~~~-~~~~~-v~~~t~  236 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EVGA-------DAA--VKSGA-GAADA-IRELTG  236 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HTTC-------SEE--EECST-THHHH-HHHHHG
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCC-------CEE--EcCCC-cHHHH-HHHHhC
Confidence            46789999998 99999999888777 788999999988766543 3321       112  23222 22222 222221


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                      . .++|++|.++|.
T Consensus       237 g-~g~d~v~d~~G~  249 (345)
T 3jv7_A          237 G-QGATAVFDFVGA  249 (345)
T ss_dssp             G-GCEEEEEESSCC
T ss_pred             C-CCCeEEEECCCC
Confidence            1 269999999984

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.65  E-value=0.0021  Score=57.74  Aligned_cols=36  Identities=17%  Similarity=0.315  Sum_probs=31.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIK   45 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~   45 (257)
                      .+.+++|+|.|+ ||+|.++++.|+..|.. +.+++.+
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D  360 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG  360 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            567889999998 89999999999999975 8888654

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.63  E-value=0.0094  Score=47.75  Aligned_cols=77  Identities=10%  Similarity=0.085  Sum_probs=56.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           14 VALITGGARGIGECTARLFSKH-GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      ++.|.|++|.+|+.+++.+.+. ++.|+.+....+.+++....    .     +. +.+|++.++.+...+..+.+.  +
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~----~-----~D-vvIDfT~p~a~~~~~~~a~~~--g   69 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDG----N-----TE-VVIDFTHPDVVMGNLEFLIDN--G   69 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHT----T-----CC-EEEECSCTTTHHHHHHHHHHT--T
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhcc----C-----Cc-EEEEccChHHHHHHHHHHHHc--C
Confidence            6899999999999999999876 89977555444444443321    1     12 568999999998888777665  6


Q ss_pred             ccEEEeCCCC
Q 044485           93 LDIMFNNAGT  102 (257)
Q Consensus        93 id~lv~~ag~  102 (257)
                      +++|+-..|.
T Consensus        70 ~~~VigTTG~   79 (245)
T 1p9l_A           70 IHAVVGTTGF   79 (245)
T ss_dssp             CEEEECCCCC
T ss_pred             CCEEEcCCCC
Confidence            8888887763

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.56  E-value=0.0019  Score=54.80  Aligned_cols=83  Identities=18%  Similarity=0.293  Sum_probs=54.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcch-------------------hhHhHHHHhccCCCCCCCcee
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDD-------------------LGESVCKDIGSSSSSASGCSY   68 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~-------------------~~~~~~~~~~~~~~~~~~v~~   68 (257)
                      .+.+++|+|.|+ ||+|.++++.|+..|.. +.+++++.-                   +.+.+.+.+.+..+ ..++..
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~v~v~~  192 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNS-EISVSE  192 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCC-CCeEEE
Confidence            467889999998 89999999999999974 888887641                   22333344433322 234566


Q ss_pred             EecCCCCHHHHHHHHHHHHHHcCCccEEEeCCC
Q 044485           69 VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        69 ~~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag  101 (257)
                      +..++++...+..        +...|+||.+..
T Consensus       193 ~~~~i~~~~~~~~--------~~~~DlVvd~~D  217 (353)
T 3h5n_A          193 IALNINDYTDLHK--------VPEADIWVVSAD  217 (353)
T ss_dssp             EECCCCSGGGGGG--------SCCCSEEEECCC
T ss_pred             eecccCchhhhhH--------hccCCEEEEecC
Confidence            6666655442221        346788877654

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.53  E-value=0.0024  Score=53.44  Aligned_cols=40  Identities=20%  Similarity=0.401  Sum_probs=35.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHH
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVC   53 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~   53 (257)
                      ++||+|++|++|...++.+...|++|+++++++++++.+.
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~  192 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK  192 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            8999999999999999999999999999999877765543

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.49  E-value=0.005  Score=49.93  Aligned_cols=45  Identities=11%  Similarity=0.089  Sum_probs=38.7

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK   54 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   54 (257)
                      ++||+++|.|+++-+|+.+++.|..+|++|+++.++...+++...
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~~~  192 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSMTR  192 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHhhc
Confidence            889999999999999999999999999999999876655554443

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.48  E-value=0.011  Score=51.30  Aligned_cols=73  Identities=12%  Similarity=0.097  Sum_probs=54.3

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ++-+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.+.....   ..+.        -..+..|..|.+.+.++++  
T Consensus        30 ~~~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~---~~~a--------d~~~~~~~~d~~~l~~~a~--   95 (419)
T 4e4t_A           30 SPILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPA---GAVA--------DRHLRAAYDDEAALAELAG--   95 (419)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHH---HHHS--------SEEECCCTTCHHHHHHHHH--
T ss_pred             ccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCch---hhhC--------CEEEECCcCCHHHHHHHHh--
Confidence            34578999999986 68999999999999999998886654221   1121        1345688899998888773  


Q ss_pred             HHHcCCccEEEe
Q 044485           87 VTQYGKLDIMFN   98 (257)
Q Consensus        87 ~~~~~~id~lv~   98 (257)
                           ++|+|+.
T Consensus        96 -----~~D~V~~  102 (419)
T 4e4t_A           96 -----LCEAVST  102 (419)
T ss_dssp             -----HCSEEEE
T ss_pred             -----cCCEEEE
Confidence                 4899884

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.48  E-value=0.011  Score=50.40  Aligned_cols=70  Identities=21%  Similarity=0.304  Sum_probs=51.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.+.....   ..+.        -..+..|..|.+.+.+++++   
T Consensus         9 ~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~---~~~a--------d~~~~~~~~d~~~l~~~~~~---   73 (377)
T 3orq_A            9 LKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPC---RYVA--------HEFIQAKYDDEKALNQLGQK---   73 (377)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT---GGGS--------SEEEECCTTCHHHHHHHHHH---
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh---hhhC--------CEEEECCCCCHHHHHHHHHh---
Confidence            457899999986 78999999999999999999987654211   1110        13566899999888887653   


Q ss_pred             HcCCccEEE
Q 044485           89 QYGKLDIMF   97 (257)
Q Consensus        89 ~~~~id~lv   97 (257)
                          +|++.
T Consensus        74 ----~dvi~   78 (377)
T 3orq_A           74 ----CDVIT   78 (377)
T ss_dssp             ----CSEEE
T ss_pred             ----CCcce
Confidence                67764

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.48  E-value=0.0037  Score=52.10  Aligned_cols=42  Identities=21%  Similarity=0.388  Sum_probs=36.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK   54 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   54 (257)
                      ++ +||+|++|++|...++.+...|++|+.+++++++++.+.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~  189 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS  189 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence            35 9999999999999999999999999999998887665543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.48  E-value=0.0046  Score=50.42  Aligned_cols=46  Identities=17%  Similarity=0.094  Sum_probs=39.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVC   53 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~   53 (257)
                      .+++||+++|.|.++-+|+.+++.|..+|++|.++.+....+++..
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~~~  202 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHV  202 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHHHH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHHHh
Confidence            4689999999999988999999999999999999887665554443

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.43  E-value=0.0096  Score=52.15  Aligned_cols=80  Identities=23%  Similarity=0.226  Sum_probs=53.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      +++.+|+++|.|. |+.|.++|+.|.++|+.|.+.+++........+.++..+     +.++....  ++.   .++   
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~g-----i~~~~g~~--~~~---~~~---   70 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEG-----IKVVCGSH--PLE---LLD---   70 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTT-----CEEEESCC--CGG---GGG---
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCC-----CEEEECCC--hHH---hhc---
Confidence            4678999999999 889999999999999999999986532222333443332     44443322  111   111   


Q ss_pred             HHcCCccEEEeCCCCCC
Q 044485           88 TQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~  104 (257)
                         +.+|.||...|+..
T Consensus        71 ---~~~d~vv~spgi~~   84 (451)
T 3lk7_A           71 ---EDFCYMIKNPGIPY   84 (451)
T ss_dssp             ---SCEEEEEECTTSCT
T ss_pred             ---CCCCEEEECCcCCC
Confidence               13899999999854

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.39  E-value=0.0028  Score=51.76  Aligned_cols=45  Identities=20%  Similarity=0.324  Sum_probs=38.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK   54 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   54 (257)
                      ++.+++++|.|+ |++|+++++.|.+.|++|++.+|+.++.+++.+
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~  170 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQ  170 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTT
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH
Confidence            567899999996 799999999999999999999999876665543

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.39  E-value=0.0051  Score=50.16  Aligned_cols=42  Identities=17%  Similarity=0.179  Sum_probs=36.5

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhh
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG   49 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~   49 (257)
                      .+++||+++|.|.++-+|+.+++.|..+|++|.++.|+...+
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L  198 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDL  198 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhH
Confidence            478999999999998899999999999999999887654333

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.35  E-value=0.0063  Score=50.01  Aligned_cols=40  Identities=28%  Similarity=0.340  Sum_probs=36.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      .+++||+++|.|.++-+|+.+++.|...|++|.++.|+..
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~  200 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS  200 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC
Confidence            4689999999999998999999999999999999887544

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.35  E-value=0.018  Score=47.04  Aligned_cols=86  Identities=9%  Similarity=0.036  Sum_probs=59.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC---eEEEeeCcchhhHhHHHHhccC--CC-----CCCCceeEecCCCCHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGA---KVLIADIKDDLGESVCKDIGSS--SS-----SASGCSYVHCDVTKEKDIENA   82 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~---~Vi~~~r~~~~~~~~~~~~~~~--~~-----~~~~v~~~~~D~~~~~~v~~~   82 (257)
                      +++.|.|+ |.+|.++++.|++.|+   +|++.+|+++.+++..++..-.  ..     ...++.++.+   .++.++++
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~v   79 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKMV   79 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHHH
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHHH
Confidence            67888887 9999999999999998   8999999998877776542110  00     0123444433   45677888


Q ss_pred             HHHHHHH-cCCccEEEeCCCC
Q 044485           83 VNTAVTQ-YGKLDIMFNNAGT  102 (257)
Q Consensus        83 ~~~~~~~-~~~id~lv~~ag~  102 (257)
                      ++++... ..+=.++|.+++.
T Consensus        80 l~~l~~~~l~~~~iiiS~~ag  100 (280)
T 3tri_A           80 CEELKDILSETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHHTTTCEEEECCTT
T ss_pred             HHHHHhhccCCCeEEEEecCC
Confidence            8888765 4322377877653

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.28  E-value=0.0053  Score=51.51  Aligned_cols=72  Identities=19%  Similarity=0.222  Sum_probs=55.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      .+.++|.|+ |.+|+.+++.|.++|. |++++++++..+ ..+    .     .+.++.+|.+|++.++++      ...
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~----~-----~~~~i~gd~~~~~~L~~a------~i~  176 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR----S-----GANFVHGDPTRVSDLEKA------NVR  176 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH----T-----TCEEEESCTTSHHHHHHT------CST
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh----C-----CcEEEEeCCCCHHHHHhc------Chh
Confidence            457999997 9999999999999999 999999987766 332    1     278899999999877654      112


Q ss_pred             CccEEEeCCC
Q 044485           92 KLDIMFNNAG  101 (257)
Q Consensus        92 ~id~lv~~ag  101 (257)
                      ..|.+|.+.+
T Consensus       177 ~a~~vi~~~~  186 (336)
T 1lnq_A          177 GARAVIVDLE  186 (336)
T ss_dssp             TEEEEEECCS
T ss_pred             hccEEEEcCC
Confidence            5788887654

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.25  E-value=0.036  Score=43.06  Aligned_cols=76  Identities=17%  Similarity=0.153  Sum_probs=51.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+..+++.|.| .|.+|.++++.|++.|.+|++.+|+++       .+.     ..++.++.+.   ...++++++++..
T Consensus        16 ~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-------~~~-----~aD~vi~av~---~~~~~~v~~~l~~   79 (209)
T 2raf_A           16 YFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-------ATT-----LGEIVIMAVP---YPALAALAKQYAT   79 (209)
T ss_dssp             ----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-------CSS-----CCSEEEECSC---HHHHHHHHHHTHH
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-------Hhc-----cCCEEEEcCC---cHHHHHHHHHHHH
Confidence            46678899999 699999999999999999999998865       111     1234444432   6677888887765


Q ss_pred             HcCCccEEEeCCC
Q 044485           89 QYGKLDIMFNNAG  101 (257)
Q Consensus        89 ~~~~id~lv~~ag  101 (257)
                      ... =.++++++.
T Consensus        80 ~~~-~~~vi~~~~   91 (209)
T 2raf_A           80 QLK-GKIVVDITN   91 (209)
T ss_dssp             HHT-TSEEEECCC
T ss_pred             hcC-CCEEEEECC
Confidence            444 235666554

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.24  E-value=0.0032  Score=59.19  Aligned_cols=77  Identities=18%  Similarity=0.221  Sum_probs=50.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..|.++||.||+|++|.+.++.....|++|+.+.++. +.+.. + +   +   . -++  .|..+.+-    .+++.+.
T Consensus       344 ~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l-~-l---g---a-~~v--~~~~~~~~----~~~i~~~  407 (795)
T 3slk_A          344 RPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV-E-L---S---R-EHL--ASSRTCDF----EQQFLGA  407 (795)
T ss_dssp             CTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS-C-S---C---G-GGE--ECSSSSTH----HHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh-h-c---C---h-hhe--eecCChhH----HHHHHHH
Confidence            3688999999999999999999999999999988665 32211 1 1   1   0 111  24444332    2333333


Q ss_pred             c--CCccEEEeCCCC
Q 044485           90 Y--GKLDIMFNNAGT  102 (257)
Q Consensus        90 ~--~~id~lv~~ag~  102 (257)
                      .  .++|+++++.|.
T Consensus       408 t~g~GvDvVld~~gg  422 (795)
T 3slk_A          408 TGGRGVDVVLNSLAG  422 (795)
T ss_dssp             SCSSCCSEEEECCCT
T ss_pred             cCCCCeEEEEECCCc
Confidence            2  269999998764

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.23  E-value=0.052  Score=44.14  Aligned_cols=197  Identities=12%  Similarity=0.039  Sum_probs=103.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHH-cCCeEE-EeeCcchhh--HhHH-------------HHhccCCCCCCCceeEecCCCC
Q 044485           13 KVALITGGARGIGECTARLFSK-HGAKVL-IADIKDDLG--ESVC-------------KDIGSSSSSASGCSYVHCDVTK   75 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~-~g~~Vi-~~~r~~~~~--~~~~-------------~~~~~~~~~~~~v~~~~~D~~~   75 (257)
                      .++.|+|++|.+|+.+++.+.+ .|+.|+ +++++.+..  .+..             ..+...-. .  +. +.+|++.
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~-~--~D-vVIDft~   81 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD-D--FD-VFIDFTR   81 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT-S--CS-EEEECSC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc-C--CC-EEEEcCC
Confidence            5899999999999999999875 477765 555554221  1100             00111000 1  21 3468999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhh----------hchhhhHHHHHH----Hhhhc
Q 044485           76 EKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI----------NLVGAFLGRNML----LGVCG  141 (257)
Q Consensus        76 ~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~----------n~~~~~~l~~~~----~s~~~  141 (257)
                      ++.....+....+.  ++++++-..|..           .++..+..+.          |.---+++...+    .....
T Consensus        82 p~~~~~~~~~a~~~--G~~vVigTtG~~-----------~e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~  148 (273)
T 1dih_A           82 PEGTLNHLAFCRQH--GKGMVIGTTGFD-----------EAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMG  148 (273)
T ss_dssp             HHHHHHHHHHHHHT--TCEEEECCCCCC-----------HHHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHhC--CCCEEEECCCCC-----------HHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcC
Confidence            99988888877765  577888777532           2323332221          110001111111    22221


Q ss_pred             ----------cccCCCCchhhhhHHHHHHHHHHHHHHh---------------ccCCcEEEeecCCCccChhhHhHhhhh
Q 044485          142 ----------IIGGAATHAYTSSKHGLLGLMKNTAVEL---------------GRFGIRVNCVSPYAVSTPLAKDFLKLA  196 (257)
Q Consensus       142 ----------~~~~~~~~~y~~sK~a~~~~~~~l~~e~---------------~~~gi~v~~i~pg~v~t~~~~~~~~~~  196 (257)
                                ......-.+|+.++...+.+.+.+...+               .+.+|.+.+++-|.+-....--+.. .
T Consensus       149 ~~~dieiiE~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg~h~v~f~~-~  227 (273)
T 1dih_A          149 DYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFAD-I  227 (273)
T ss_dssp             TTSEEEEEEEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCEEEEEEEEE-T
T ss_pred             CCCCEEEEEeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCccEEEEEcC-C
Confidence                      0011112468888888887776655432               1357899999966654443321111 1


Q ss_pred             hccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          197 DDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      .+. -.+......|-....-+..++.|+....
T Consensus       228 ge~-i~i~H~a~~R~~fa~Ga~~Aa~~l~~~~  258 (273)
T 1dih_A          228 GER-LEITHKASSRMTFANGAVRSALWLSGKE  258 (273)
T ss_dssp             TEE-EEEEEEECSTHHHHHHHHHHHHHHTTCC
T ss_pred             CcE-EEEEEEeCCHHHHHHHHHHHHHHHhcCC
Confidence            111 1111222334344566667777787653

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=96.22  E-value=0.003  Score=54.55  Aligned_cols=48  Identities=19%  Similarity=0.216  Sum_probs=38.5

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEE-EeeC----------cchhhHhHHHHh
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVL-IADI----------KDDLGESVCKDI   56 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi-~~~r----------~~~~~~~~~~~~   56 (257)
                      .++++++++|.| .|.+|..+++.|.+.|++|+ +.++          +.+.+.+..++.
T Consensus       214 ~~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~  272 (419)
T 3aoe_E          214 LDLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEAT  272 (419)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHH
T ss_pred             CCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhh
Confidence            368899999998 79999999999999999988 6676          445555555543

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=96.21  E-value=0.0071  Score=50.85  Aligned_cols=80  Identities=20%  Similarity=0.213  Sum_probs=50.2

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKH-GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ..|.++||.|+ |++|...++.++.. |++|+.+++++++++... ++..       -  ...|..+.+..+++.+ +..
T Consensus       162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~~Ga-------~--~~i~~~~~~~~~~v~~-~t~  229 (348)
T 4eez_A          162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-KIGA-------D--VTINSGDVNPVDEIKK-ITG  229 (348)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-HTTC-------S--EEEEC-CCCHHHHHHH-HTT
T ss_pred             CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-hcCC-------e--EEEeCCCCCHHHHhhh-hcC
Confidence            46789999987 78887777777765 788999999987764443 3311       1  1245555544433222 211


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                      . .++|.++.+++.
T Consensus       230 g-~g~d~~~~~~~~  242 (348)
T 4eez_A          230 G-LGVQSAIVCAVA  242 (348)
T ss_dssp             S-SCEEEEEECCSC
T ss_pred             C-CCceEEEEeccC
Confidence            1 258889988874

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.20  E-value=0.019  Score=47.76  Aligned_cols=77  Identities=16%  Similarity=0.250  Sum_probs=49.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC--CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           14 VALITGGARGIGECTARLFSKHG--AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      ++.|+||+|.+|..++..|+..|  ..|++.++++  .+....++...... .++..+.    ...+.++.+       .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~-~~l~~~~----~t~d~~~a~-------~   67 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETR-ATVKGYL----GPEQLPDCL-------K   67 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSS-CEEEEEE----SGGGHHHHH-------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcC-ceEEEec----CCCCHHHHh-------C
Confidence            68999999999999999999988  5799999987  23333344322110 0111110    011222222       3


Q ss_pred             CccEEEeCCCCCC
Q 044485           92 KLDIMFNNAGTVD  104 (257)
Q Consensus        92 ~id~lv~~ag~~~  104 (257)
                      ..|++|+++|...
T Consensus        68 ~aDvVvi~ag~~~   80 (314)
T 1mld_A           68 GCDVVVIPAGVPR   80 (314)
T ss_dssp             TCSEEEECCSCCC
T ss_pred             CCCEEEECCCcCC
Confidence            7999999999764

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.20  E-value=0.0085  Score=48.90  Aligned_cols=47  Identities=11%  Similarity=0.025  Sum_probs=40.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK   54 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   54 (257)
                      .++.||+++|.|++.-+|+.+++.|..+|++|.++.++...+++...
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~  201 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVE  201 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHH
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHhc
Confidence            47899999999999899999999999999999999877665554443

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.12  E-value=0.022  Score=47.58  Aligned_cols=78  Identities=13%  Similarity=0.139  Sum_probs=52.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCCCC-CCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSSS-ASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+++.|+|+ |.+|.+++..|+..|.  +|++.++++++++....++....+. ...+.....|   .+           
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~-----------   69 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE-----------   69 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG-----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH-----------
Confidence            468999996 9999999999999997  7999999887766544444332110 0113333222   11           


Q ss_pred             HcCCccEEEeCCCCCC
Q 044485           89 QYGKLDIMFNNAGTVD  104 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~  104 (257)
                      .+..-|++|.++|...
T Consensus        70 a~~~aDvVvi~ag~p~   85 (326)
T 3pqe_A           70 DCKDADIVCICAGANQ   85 (326)
T ss_dssp             GGTTCSEEEECCSCCC
T ss_pred             HhCCCCEEEEecccCC
Confidence            2236999999999653

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.12  E-value=0.0085  Score=49.21  Aligned_cols=45  Identities=18%  Similarity=0.200  Sum_probs=38.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      .++.|++++|.|++.-+|+.+++.|..+|++|.++.++...+++.
T Consensus       161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~  205 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEE  205 (301)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHHH
Confidence            478999999999999999999999999999999987766554443

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.10  E-value=0.022  Score=46.94  Aligned_cols=35  Identities=29%  Similarity=0.350  Sum_probs=32.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      +++.|.||.|.+|.++++.|++.|++|++.+|+++
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            57999998999999999999999999999998865

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.08  E-value=0.011  Score=48.83  Aligned_cols=39  Identities=23%  Similarity=0.364  Sum_probs=34.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      +++.|.|+ |.+|.++|..|++.|++|++.+|+++.+++.
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            57889988 9999999999999999999999998776654

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.07  E-value=0.01  Score=48.48  Aligned_cols=42  Identities=14%  Similarity=0.192  Sum_probs=37.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK   54 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   54 (257)
                      +++.|.|++|.+|.++++.|++.|++|++.+|+++..++..+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            579999999999999999999999999999999877666543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.07  E-value=0.014  Score=48.60  Aligned_cols=91  Identities=10%  Similarity=0.064  Sum_probs=59.0

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHH-hccCCCC---CCCceeEecCCCCHHHHHHHHH-
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKD-IGSSSSS---ASGCSYVHCDVTKEKDIENAVN-   84 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~-~~~~~~~---~~~v~~~~~D~~~~~~v~~~~~-   84 (257)
                      ...+++.|.|. |.+|..+++.|++.|++|++.+|+++..+++.+. +......   ..+..++..=+.+...++.++. 
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~  107 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA  107 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence            34568888876 9999999999999999999999998877665432 0000000   0112334444556667777776 


Q ss_pred             -HHHHHcCCccEEEeCCC
Q 044485           85 -TAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        85 -~~~~~~~~id~lv~~ag  101 (257)
                       ++.+...+-.++|++..
T Consensus       108 ~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          108 QGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             TCHHHHCCTTCEEEECSC
T ss_pred             hhHHhhCCCCCEEEecCC
Confidence             56555544556777655

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.05  E-value=0.0079  Score=50.51  Aligned_cols=79  Identities=18%  Similarity=0.201  Sum_probs=48.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC--e-----EEEeeCcc--hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGA--K-----VLIADIKD--DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~--~-----Vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      ++++||||+|.+|.+++..|+..|.  .     +++.++++  +.++-...++.....+.  ..    ++.......   
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~--~~----~~~~~~~~~---   74 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL--LK----DVIATDKEE---   74 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT--EE----EEEEESCHH---
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcc--cC----CEEEcCCcH---
Confidence            5899999999999999999998875  4     89998864  23333333443221110  11    111111111   


Q ss_pred             HHHHHHcCCccEEEeCCCCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~  104 (257)
                          +.+.+.|++|+.||...
T Consensus        75 ----~~~~daDvVvitAg~pr   91 (333)
T 5mdh_A           75 ----IAFKDLDVAILVGSMPR   91 (333)
T ss_dssp             ----HHTTTCSEEEECCSCCC
T ss_pred             ----HHhCCCCEEEEeCCCCC
Confidence                12237999999999754

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.05  E-value=0.0091  Score=48.27  Aligned_cols=46  Identities=22%  Similarity=0.363  Sum_probs=40.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHh
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI   56 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~   56 (257)
                      ++++ +++|.|+ |++|+++++.|.+.|++|++++|+.++.+++.++.
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            5778 9999997 78999999999999999999999988777776655

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.03  E-value=0.034  Score=46.57  Aligned_cols=80  Identities=19%  Similarity=0.196  Sum_probs=52.2

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ..|+++||.|+ |++|...++.+...|+. ++.+++++++++.+ +++..       -+.  .|.++.+ ..+..+++.+
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-~~lGa-------~~~--i~~~~~~-~~~~~~~~~~  226 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALA-KSFGA-------MQT--FNSSEMS-APQMQSVLRE  226 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTC-------SEE--EETTTSC-HHHHHHHHGG
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHH-HHcCC-------eEE--EeCCCCC-HHHHHHhhcc
Confidence            46889999987 89999999999999987 46777777765433 34321       122  3444332 2233333332


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                       .+.+|+++.++|.
T Consensus       227 -~~g~d~v~d~~G~  239 (346)
T 4a2c_A          227 -LRFNQLILETAGV  239 (346)
T ss_dssp             -GCSSEEEEECSCS
T ss_pred             -cCCcccccccccc
Confidence             2468999999884

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.00  E-value=0.027  Score=44.38  Aligned_cols=39  Identities=23%  Similarity=0.399  Sum_probs=35.1

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      ..+++||.+||.|| |.+|..-++.|.+.|++|++++.+.
T Consensus        26 fl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~   64 (223)
T 3dfz_A           26 MLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTV   64 (223)
T ss_dssp             EECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCC
Confidence            45899999999998 6999999999999999999998764

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=95.96  E-value=0.024  Score=49.15  Aligned_cols=40  Identities=25%  Similarity=0.426  Sum_probs=35.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL   48 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   48 (257)
                      ..+.||+++|.|. |.||+.+|+.+...|++|+++++++..
T Consensus       243 ~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~  282 (464)
T 3n58_A          243 VMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPIC  282 (464)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcch
Confidence            4689999999996 679999999999999999999887653

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=95.95  E-value=0.016  Score=48.80  Aligned_cols=77  Identities=17%  Similarity=0.188  Sum_probs=47.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcC-CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      -.|+++||.|++|++|...++.....| +.|+.+++ .++.+.+.  +..       -.+  .| .+.+..++ +.++. 
T Consensus       141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~-~~~~~~~~--~ga-------~~~--~~-~~~~~~~~-~~~~~-  205 (349)
T 4a27_A          141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS-TFKHEAIK--DSV-------THL--FD-RNADYVQE-VKRIS-  205 (349)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEEC-GGGHHHHG--GGS-------SEE--EE-TTSCHHHH-HHHHC-
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCC-HHHHHHHH--cCC-------cEE--Ec-CCccHHHH-HHHhc-
Confidence            367899999999999999998877775 67887763 33433332  211       112  23 33332222 22221 


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                       -+++|++|.+.|.
T Consensus       206 -~~g~Dvv~d~~g~  218 (349)
T 4a27_A          206 -AEGVDIVLDCLCG  218 (349)
T ss_dssp             -TTCEEEEEEECC-
T ss_pred             -CCCceEEEECCCc
Confidence             2479999999984

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.93  E-value=0.061  Score=43.86  Aligned_cols=88  Identities=13%  Similarity=0.109  Sum_probs=57.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHh-ccCCCC---CCCceeEecCCCCHHHHHHHH---HH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI-GSSSSS---ASGCSYVHCDVTKEKDIENAV---NT   85 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~-~~~~~~---~~~v~~~~~D~~~~~~v~~~~---~~   85 (257)
                      +++.|.|. |.+|.++++.|++.|++|++.+|+++..+++.+.- ......   ..+..++..=+.+...++.++   ++
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            57888885 99999999999999999999999988776654321 000000   001233334445566777777   66


Q ss_pred             HHHHcCCccEEEeCCC
Q 044485           86 AVTQYGKLDIMFNNAG  101 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag  101 (257)
                      +.....+=.++|++.+
T Consensus        81 l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           81 VLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHHHCCTTCEEEECSC
T ss_pred             HhhcCCCCCEEEeCCC
Confidence            6665444456777654

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.93  E-value=0.022  Score=46.83  Aligned_cols=88  Identities=11%  Similarity=0.099  Sum_probs=58.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHH-hccCCCC--CCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKD-IGSSSSS--ASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~-~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +++.|.|. |.+|..+++.|++.|++|++.+|+++..+++.+. +......  ..+..++..=+.+...++++++++...
T Consensus        16 ~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~l~~~   94 (296)
T 3qha_A           16 LKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAAADLIHITVLDDAQVREVVGELAGH   94 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTTSSEEEECCSSHHHHHHHHHHHHTT
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHhCCEEEEECCChHHHHHHHHHHHHh
Confidence            57888874 8999999999999999999999999877766442 1000000  000233444455677788888777665


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                      ..+-.++|++..
T Consensus        95 l~~g~ivv~~st  106 (296)
T 3qha_A           95 AKPGTVIAIHST  106 (296)
T ss_dssp             CCTTCEEEECSC
T ss_pred             cCCCCEEEEeCC
Confidence            444457777665

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=95.91  E-value=0.032  Score=48.19  Aligned_cols=41  Identities=17%  Similarity=0.271  Sum_probs=36.2

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhh
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG   49 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~   49 (257)
                      ..+.||+++|.|. |.||+.+|+.+...|++|+++++++...
T Consensus       216 ~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra  256 (435)
T 3gvp_A          216 MMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICA  256 (435)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             ceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhh
Confidence            3578999999998 7899999999999999999999887543

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=95.88  E-value=0.035  Score=47.46  Aligned_cols=71  Identities=20%  Similarity=0.199  Sum_probs=50.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      -+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.+.....   ..+       . -..+..|..|.+.+.++++    
T Consensus        11 ~~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~---~~~-------a-d~~~~~~~~d~~~l~~~~~----   74 (389)
T 3q2o_A           11 ILPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPC---AQV-------A-DIEIVASYDDLKAIQHLAE----   74 (389)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTT---TTT-------C-SEEEECCTTCHHHHHHHHH----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCch---HHh-------C-CceEecCcCCHHHHHHHHH----
Confidence            368899999987 56999999999999999999987653210   000       0 1245578888888777765    


Q ss_pred             HcCCccEEEe
Q 044485           89 QYGKLDIMFN   98 (257)
Q Consensus        89 ~~~~id~lv~   98 (257)
                         ..|++..
T Consensus        75 ---~~dvI~~   81 (389)
T 3q2o_A           75 ---ISDVVTY   81 (389)
T ss_dssp             ---TCSEEEE
T ss_pred             ---hCCEeee
Confidence               3677643

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.85  E-value=0.012  Score=47.93  Aligned_cols=45  Identities=16%  Similarity=0.267  Sum_probs=39.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHh
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDI   56 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~   56 (257)
                      .+++++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+++.+++
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            4688999996 8999999999999998 6999999998888887766

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=95.85  E-value=0.012  Score=61.87  Aligned_cols=81  Identities=12%  Similarity=0.236  Sum_probs=54.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|.+|||.||+||+|.+.++.....|++|++++++.++.+.+.+.....+   . .++  .|..+.+-    .+++.+..
T Consensus      1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lg---a-~~v--~~~~~~~~----~~~i~~~t 1736 (2512)
T 2vz8_A         1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLD---E-TCF--ANSRDTSF----EQHVLRHT 1736 (2512)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCC---S-TTE--EESSSSHH----HHHHHHTT
T ss_pred             CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCC---c-eEE--ecCCCHHH----HHHHHHhc
Confidence            68899999999999999999998999999999988877666655332111   0 111  23344332    33333322


Q ss_pred             --CCccEEEeCCC
Q 044485           91 --GKLDIMFNNAG  101 (257)
Q Consensus        91 --~~id~lv~~ag  101 (257)
                        .++|+++++.+
T Consensus      1737 ~g~GvDvVld~~g 1749 (2512)
T 2vz8_A         1737 AGKGVDLVLNSLA 1749 (2512)
T ss_dssp             TSCCEEEEEECCC
T ss_pred             CCCCceEEEECCC
Confidence              25999999875

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.85  E-value=0.062  Score=43.50  Aligned_cols=82  Identities=11%  Similarity=0.091  Sum_probs=51.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHH-h--------ccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKD-I--------GSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~-~--------~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      ++.|.| .|.+|.++++.|.+.|++|++.+|+++..++..+. +        .+.  ...++.++.+   .+..+..+++
T Consensus         2 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~D~vi~av---~~~~~~~~~~   75 (279)
T 2f1k_A            2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL--QTAKIIFLCT---PIQLILPTLE   75 (279)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG--TTCSEEEECS---CHHHHHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh--CCCCEEEEEC---CHHHHHHHHH
Confidence            578888 59999999999999999999999998776665321 0        001  1122322222   3556777777


Q ss_pred             HHHHHcCCccEEEeCCC
Q 044485           85 TAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag  101 (257)
                      ++.....+=.+|++.++
T Consensus        76 ~l~~~~~~~~~vv~~~~   92 (279)
T 2f1k_A           76 KLIPHLSPTAIVTDVAS   92 (279)
T ss_dssp             HHGGGSCTTCEEEECCS
T ss_pred             HHHhhCCCCCEEEECCC
Confidence            76554332235555533

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=95.82  E-value=0.17  Score=41.10  Aligned_cols=136  Identities=13%  Similarity=0.162  Sum_probs=80.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc-CCeEEE-eeCcchh---------------------hHhHHHHhccCCCCCCCceeE
Q 044485           13 KVALITGGARGIGECTARLFSKH-GAKVLI-ADIKDDL---------------------GESVCKDIGSSSSSASGCSYV   69 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~-g~~Vi~-~~r~~~~---------------------~~~~~~~~~~~~~~~~~v~~~   69 (257)
                      .++.|+|++|.+|+.+++.+.+. ++.++. ++|+.+.                     ++++.++        .+   +
T Consensus         8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~--------~D---V   76 (272)
T 4f3y_A            8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAE--------AD---Y   76 (272)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHH--------CS---E
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcC--------CC---E
Confidence            57999999999999999999875 677555 5665321                     1121111        11   3


Q ss_pred             ecCCCCHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhhccccCCCCc
Q 044485           70 HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGGAATH  149 (257)
Q Consensus        70 ~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~~~~~~~~~~  149 (257)
                      ..|++.++.....+..+.+.  ++++|+-+.|.           +.++..+.-+.               +...+.-..+
T Consensus        77 VIDfT~p~a~~~~~~~al~~--G~~vVigTTG~-----------s~~~~~~L~~a---------------a~~~~vv~a~  128 (272)
T 4f3y_A           77 LIDFTLPEGTLVHLDAALRH--DVKLVIGTTGF-----------SEPQKAQLRAA---------------GEKIALVFSA  128 (272)
T ss_dssp             EEECSCHHHHHHHHHHHHHH--TCEEEECCCCC-----------CHHHHHHHHHH---------------TTTSEEEECS
T ss_pred             EEEcCCHHHHHHHHHHHHHc--CCCEEEECCCC-----------CHHHHHHHHHH---------------hccCCEEEEC
Confidence            47888898888888777766  57788877663           22333222111               1111111122


Q ss_pred             hhhhhHHHHHHHHHHHHHHhc-cCCcEEEeecCC-CccCh
Q 044485          150 AYTSSKHGLLGLMKNTAVELG-RFGIRVNCVSPY-AVSTP  187 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~-~~gi~v~~i~pg-~v~t~  187 (257)
                      .|+..=..+..|++.+++.+. ...|.+.-.|-- =+|.|
T Consensus       129 N~s~Gv~l~~~~~~~aa~~l~~~~diei~E~HH~~K~DaP  168 (272)
T 4f3y_A          129 NMSVGVNVTMKLLEFAAKQFAQGYDIEIIEAHHRHKVDAP  168 (272)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTSSSCEEEEEEEECTTCCSSS
T ss_pred             CCCHHHHHHHHHHHHHHHhcCcCCCEEEEEecCCCCCCCC
Confidence            344444566677777777774 346777666654 34544

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=95.76  E-value=0.014  Score=50.77  Aligned_cols=36  Identities=19%  Similarity=0.335  Sum_probs=30.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIK   45 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~   45 (257)
                      .+.+.+|+|.|+ ||+|.++++.|+..|.. +.+++.+
T Consensus        37 ~L~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D   73 (434)
T 1tt5_B           37 LLDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   73 (434)
T ss_dssp             HHHTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECC
T ss_pred             HhcCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            346789999997 89999999999999975 8888643

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.71  E-value=0.072  Score=43.99  Aligned_cols=76  Identities=14%  Similarity=0.243  Sum_probs=47.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           14 VALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      ++.|+|+ |.+|..++..|+..|.  +|++.+++++.++....++.........+... .  .+.+           ...
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~~~~-----------a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-H--GGHS-----------ELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-E--ECGG-----------GGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-E--CCHH-----------HhC
Confidence            6889998 9999999999999998  89999999876654444443221100112221 1  1221           123


Q ss_pred             CccEEEeCCCCCC
Q 044485           92 KLDIMFNNAGTVD  104 (257)
Q Consensus        92 ~id~lv~~ag~~~  104 (257)
                      ..|++|.+++...
T Consensus        67 ~aDvVIi~~~~~~   79 (304)
T 2v6b_A           67 DAQVVILTAGANQ   79 (304)
T ss_dssp             TCSEEEECC----
T ss_pred             CCCEEEEcCCCCC
Confidence            6899999998653

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=95.70  E-value=0.014  Score=53.11  Aligned_cols=84  Identities=12%  Similarity=0.129  Sum_probs=53.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc-------------------hhhHhHHHHhccCCCCCCCcee
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKD-------------------DLGESVCKDIGSSSSSASGCSY   68 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~v~~   68 (257)
                      .+.+.+|+|.|+ ||+|..+++.|+..|.. +.+++.+.                   .+.+.+.+.+.+.. +..++..
T Consensus        14 kL~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iN-P~v~V~a   91 (640)
T 1y8q_B           14 AVAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFY-PKANIVA   91 (640)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTC-TTCEEEE
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHC-CCCeEEE
Confidence            456789999998 99999999999999974 88887643                   12233444454443 2344666


Q ss_pred             EecCCCCHHHHHHHHHHHHHHcCCccEEEeCCC
Q 044485           69 VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        69 ~~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag  101 (257)
                      +..++++......++       ...|+||++..
T Consensus        92 ~~~~i~~~~~~~~~~-------~~~DlVvda~D  117 (640)
T 1y8q_B           92 YHDSIMNPDYNVEFF-------RQFILVMNALD  117 (640)
T ss_dssp             EESCTTSTTSCHHHH-------TTCSEEEECCS
T ss_pred             EecccchhhhhHhhh-------cCCCEEEECCC
Confidence            666665432111221       35777777643

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=95.65  E-value=0.11  Score=42.63  Aligned_cols=41  Identities=20%  Similarity=0.216  Sum_probs=35.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK   54 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   54 (257)
                      +++.|.|+ |.+|..++..|++.|++|++.+|+++..+++.+
T Consensus         4 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~   44 (316)
T 2ew2_A            4 MKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRK   44 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh
Confidence            47899986 999999999999999999999999877766654

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.59  E-value=0.014  Score=47.36  Aligned_cols=42  Identities=14%  Similarity=0.198  Sum_probs=36.5

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHc--CCeEEEeeCcchhh
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKH--GAKVLIADIKDDLG   49 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~--g~~Vi~~~r~~~~~   49 (257)
                      .++.||+++|.|++.-+|+.+++.|.++  |++|+++.|+...+
T Consensus       154 i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L  197 (281)
T 2c2x_A          154 ISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDL  197 (281)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHH
Confidence            4789999999999888999999999999  89999887665443

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=95.59  E-value=0.02  Score=45.76  Aligned_cols=42  Identities=19%  Similarity=0.203  Sum_probs=33.4

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL   48 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   48 (257)
                      +..++.++++.|.| .|.+|.++++.|++.|++|++.+|+++.
T Consensus        13 ~~~~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           13 ENLYFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             ------CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             cccccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            44567889999997 6999999999999999999999999875

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=95.53  E-value=0.016  Score=45.47  Aligned_cols=43  Identities=23%  Similarity=0.209  Sum_probs=37.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEE-eeCcchhhHhHHHHh
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDI   56 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~-~~r~~~~~~~~~~~~   56 (257)
                      +++.|.| +|.+|.++++.|++.|++|++ .+|+++..++..++.
T Consensus        24 mkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~   67 (220)
T 4huj_A           24 TTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF   67 (220)
T ss_dssp             CCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh
Confidence            5789999 699999999999999999988 899988887766554

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=95.49  E-value=0.011  Score=49.82  Aligned_cols=35  Identities=26%  Similarity=0.404  Sum_probs=30.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeC
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADI   44 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r   44 (257)
                      .+.+.+|+|.|+ ||+|..+++.|+..|. ++.+++.
T Consensus        33 ~L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~   68 (346)
T 1y8q_A           33 RLRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDH   68 (346)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEEC
Confidence            467789999997 8999999999999998 4888854

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.49  E-value=0.11  Score=43.03  Aligned_cols=41  Identities=22%  Similarity=0.222  Sum_probs=35.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVC   53 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~   53 (257)
                      -+++.|.| .|.+|.++++.|.+.|+  +|++.+|+++.+++..
T Consensus        33 ~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~   75 (314)
T 3ggo_A           33 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV   75 (314)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred             CCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence            37899999 69999999999999999  8999999987766554

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.48  E-value=0.017  Score=45.25  Aligned_cols=40  Identities=15%  Similarity=0.145  Sum_probs=34.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      .+++.|+| +|.+|.++++.|++.|++|++.+|+.+..++.
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~   67 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL   67 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            46799998 79999999999999999999999987765544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	257
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	7e-64
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	4e-62
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-61
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	8e-60
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	2e-59
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-58
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	7e-58
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	4e-56
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	7e-55
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	4e-54
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	1e-53
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-53
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	3e-53
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	5e-53
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-52
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-51
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-51
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	5e-51
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-50
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-50
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-50
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-50
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	3e-50
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	3e-50
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	6e-50
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	1e-49
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-49
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-49
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	3e-49
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	4e-49
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	5e-49
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	9e-49
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-47
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	6e-47
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	6e-46
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	6e-46
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	7e-46
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-45
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-45
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-44
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-43
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	6e-43
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	1e-41
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-41
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-40
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-40
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	3e-38
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	5e-37
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	7e-36
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-35
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	3e-35
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	9e-35
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-34
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-32
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-31
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	4e-31
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-28
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	8e-28
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-27
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	5e-27
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-26
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	6e-26
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	3e-23
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	1e-21
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	5e-20
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	3e-14
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	2e-11
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-09
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	1e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-04
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	2e-04
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	5e-04
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	6e-04
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	6e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	0.001
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.001
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.001
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.003

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  198 bits (505), Expect = 7e-64
 Identities = 117/261 (44%), Positives = 156/261 (59%), Gaps = 23/261 (8%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RLQ KVA+ITGGA GIGE TA+LF ++GAKV+IADI DD G+ VC +IG    S    S+
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIG----SPDVISF 58

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           VHCDVTK++D+ N V+T + ++GKLDIMF N G +     +IL+    +F+R++ IN+ G
Sbjct: 59  VHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYG 118

Query: 129 AFL---------------GRNMLLGVCGIIGGAATHA-YTSSKHGLLGLMKNTAVELGRF 172
           AFL                      +     G      YT++KH +LGL  +   ELG +
Sbjct: 119 AFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEY 178

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY---SNLKGAVLEPEDAAEAALYLGSDES 229
           GIRVNCVSPY V++PL  D   +    +  +    +NLKG +L  ED A+A  YL  DES
Sbjct: 179 GIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDES 238

Query: 230 KCVSGHNLVVDGGFAIVNAGF 250
           K VSG NLV+DGG+   N  F
Sbjct: 239 KYVSGLNLVIDGGYTRTNPAF 259

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  194 bits (493), Expect = 4e-62
 Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 27/264 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           R   KVA+ITG + GIG  TA LF++ GAKV I     +  E   + I ++  S    + 
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 61

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTV--DEVKPNILDNDQAEFERILSINL 126
           V  DVT +   +  ++T + ++GKLDI+ NNAG    D             ++  L++NL
Sbjct: 62  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 127 VGAFL---------------GRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
                                 N+     G+        Y+ +K  +    +NTA++L +
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 181

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--------GAVLEPEDAAEAALY 223
            GIRVN +SP  V+T        + ++     YS +         G + +P+D AE   +
Sbjct: 182 HGIRVNSISPGLVATGFGSAMG-MPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF 240

Query: 224 LGSDE-SKCVSGHNLVVDGGFAIV 246
           L   + S  + GH LVVDGG +++
Sbjct: 241 LADRKTSSYIIGHQLVVDGGSSLI 264

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  191 bits (487), Expect = 2e-61
 Identities = 70/254 (27%), Positives = 114/254 (44%), Gaps = 30/254 (11%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
              GK  L+TGGARGIG   A+ F++ GA V + D++ +  E            A G ++
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA---------EAIGGAF 52

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              D+  E++    V  A    G++D++ NNA        + L     E+ R+L +NL  
Sbjct: 53  FQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPG--SALTVRLPEWRRVLEVNLTA 110

Query: 129 AFLG---------------RNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
                                 +  V G+       AY +SK GL+ L ++ A++L    
Sbjct: 111 PMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLR 170

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK----GAVLEPEDAAEAALYLGSDES 229
           IRVN V+P A++T    + + L+ D                + +PE+ AEA L+L S+++
Sbjct: 171 IRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKA 230

Query: 230 KCVSGHNLVVDGGF 243
             ++G  L VDGG 
Sbjct: 231 SFITGAILPVDGGM 244

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  187 bits (476), Expect = 8e-60
 Identities = 68/251 (27%), Positives = 109/251 (43%), Gaps = 24/251 (9%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCS 67
           RL+ K+A+ITGGA GIG   A  F+  GA + IAD+      E+  +++G          
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRR------VL 55

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
            V CDV++  D+E      ++ +G+ DI+ NNAG    +     +    ++++   IN+ 
Sbjct: 56  TVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLI--PFDELTFEQWKKTFEINVD 113

Query: 128 GAFL---------------GRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
             FL                   L      +   A   Y S+K   +G  +  A +LG+ 
Sbjct: 114 SGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKD 173

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV 232
           GI VN ++P  V T   +     A   +          +  P D   AA +L SD++  +
Sbjct: 174 GITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFI 233

Query: 233 SGHNLVVDGGF 243
           +G  L VDGG 
Sbjct: 234 TGQTLAVDGGM 244

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  187 bits (476), Expect = 2e-59
 Identities = 70/261 (26%), Positives = 111/261 (42%), Gaps = 23/261 (8%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           R  GK  +ITG + GIG   A +F+K GA+V I    +D  E   + I  +   A   + 
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 60

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  DVT+    ++ +NT + ++GK+DI+ NNAG          D     +++   +N   
Sbjct: 61  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 129 AFLGRNMLLG---------------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
                                    V G    +    Y  +K  L    + TA++L + G
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 180

Query: 174 IRVNCVSPYAVSTPLAKDFL--KLADDGLGGMYSNLK-----GAVLEPEDAAEAALYLGS 226
           +RVN VSP AV+T         + A D L     + K     G   +PE+ A   ++L  
Sbjct: 181 VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD 240

Query: 227 -DESKCVSGHNLVVDGGFAIV 246
            + S  + G ++V DGG  +V
Sbjct: 241 RNLSSYIIGQSIVADGGSTLV 261

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  184 bits (469), Expect = 2e-58
 Identities = 75/263 (28%), Positives = 109/263 (41%), Gaps = 25/263 (9%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           R   K  +ITG + GIG  TA LF++ GA V I     +  E   + I  S  S    + 
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 61

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTV--DEVKPNILDNDQAEFERILSINL 126
           V  DVT E   +  +N+ + Q+GK+D++ NNAG    D       D     + + L +NL
Sbjct: 62  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121

Query: 127 VGAFLG---------------RNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
                                 N+   V G         Y  +K  L    ++TA++L +
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 181

Query: 172 FGIRVNCVSPYAVSTPLAKDFLK--LADDGLGGMYSNLK-----GAVLEPEDAAEAALYL 224
           FGIRVN VSP  V T           A        ++ K     GA  +PE  A   L+L
Sbjct: 182 FGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL 241

Query: 225 GSDE-SKCVSGHNLVVDGGFAIV 246
                S  + G ++V DGG ++V
Sbjct: 242 ADRNLSFYILGQSIVADGGTSLV 264

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (464), Expect = 7e-58
 Identities = 71/255 (27%), Positives = 125/255 (49%), Gaps = 27/255 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           R  GKV ++TGG RGIG    R F   GA+V+I D  +  G ++ +++        G  +
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-------GAVF 55

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           + CDVT+E D++  V+  + ++G+LD + NNAG     +    +     F ++L +NL+G
Sbjct: 56  ILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQR-PEETSAQGFRQLLELNLLG 114

Query: 129 AFLGRNMLL--------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
            +    + L               + G IG A    Y ++K  +  + K  A++   +G+
Sbjct: 115 TYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGV 174

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK----GAVLEPEDAAEAALYLGSDESK 230
           RVNC+SP  + TPL ++   L  D    +   +     G + +P +   AA++L S+ + 
Sbjct: 175 RVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-AN 233

Query: 231 CVSGHNLVVDGGFAI 245
             +G  L+V GG  +
Sbjct: 234 FCTGIELLVTGGAEL 248

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  178 bits (452), Expect = 4e-56
 Identities = 77/253 (30%), Positives = 119/253 (47%), Gaps = 25/253 (9%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL GKVA+ITGG  GIG   A  F + GAKV+I     D+GE   K +G    +     +
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVG----TPDQIQF 58

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              D + E       +     +G +  + NNAG    V  ++ +   AE+ ++L++NL G
Sbjct: 59  FQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI--AVNKSVEETTTAEWRKLLAVNLDG 116

Query: 129 AFLGRNMLL----------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVE--LG 170
            F G  + +                 + G +G  +  AY +SK  +  + K+ A++  L 
Sbjct: 117 VFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALK 176

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
            + +RVN V P  + TPL  D    A++ +        G + EP D A   +YL S+ESK
Sbjct: 177 DYDVRVNTVHPGYIKTPLVDDLPG-AEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESK 235

Query: 231 CVSGHNLVVDGGF 243
             +G   VVDGG+
Sbjct: 236 FATGSEFVVDGGY 248

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  175 bits (444), Expect = 7e-55
 Identities = 63/260 (24%), Positives = 103/260 (39%), Gaps = 25/260 (9%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+G  AL+TGG+RGIG       +  GA V                     S        
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWR---SKGFKVEAS 62

Query: 70  HCDVTKEKDIENAVNTAVTQY-GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
            CD++   + +  +NT    + GKL+I+ NNAG V  +     D    ++  I+SIN   
Sbjct: 63  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV--IYKEAKDYTVEDYSLIMSINFEA 120

Query: 129 AFL---------------GRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
           A+                    +  V G +       Y ++K  +  L +  A E  +  
Sbjct: 121 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDN 180

Query: 174 IRVNCVSPYAVSTPLAKDFLKLAD--DGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESK 230
           IRVN V P  ++T L +  ++  +  + L  +        + EP++ A    +L    + 
Sbjct: 181 IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAAS 240

Query: 231 CVSGHNLVVDGGFAIVNAGF 250
            V+G  + VDGG  + N GF
Sbjct: 241 YVTGQIIYVDGGL-MANCGF 259

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  173 bits (439), Expect = 4e-54
 Identities = 71/254 (27%), Positives = 109/254 (42%), Gaps = 27/254 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RLQGKVAL+TGGA G+G    +L    GAKV  +DI +  G+ +  ++G          +
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER------SMF 56

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  DV+ E D    +     + G L+++ NNAG +      +      +F R+L IN   
Sbjct: 57  VRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGD--METGRLEDFSRLLKINTES 114

Query: 129 AFLGRNMLL--------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR--F 172
            F+G    +               V   +       Y++SK  +  L +  A+   +  +
Sbjct: 115 VFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGY 174

Query: 173 GIRVNCVSPYAVSTPLAKDFLK---LADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES 229
            IRVN + P  + TP+ +  L      +  L     N  G    PE  A+  L+L SDES
Sbjct: 175 AIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDES 234

Query: 230 KCVSGHNLVVDGGF 243
             +SG  L  D   
Sbjct: 235 SVMSGSELHADNSI 248

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  173 bits (439), Expect = 1e-53
 Identities = 59/262 (22%), Positives = 118/262 (45%), Gaps = 20/262 (7%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG--C 66
            LQG+VA++TGGA GIG+   +   + G+ V+IA  K +  +S   ++ ++         
Sbjct: 9   LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 68

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
             + C++  E+++ N V + +  +GK++ + NN G         + +    +  +L  NL
Sbjct: 69  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKG--WHAVLETNL 126

Query: 127 VGAFL--------------GRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
            G F               G  + + V    G        +++ G+  L K+ A+E    
Sbjct: 127 TGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACS 186

Query: 173 GIRVNCVSPYAVSTPLA-KDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESK 230
           GIR+NCV+P  + +  A +++         G +  +    +  PE+ +    +L S  + 
Sbjct: 187 GIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAAS 246

Query: 231 CVSGHNLVVDGGFAIVNAGFSV 252
            ++G ++ VDGG ++    + V
Sbjct: 247 FITGQSVDVDGGRSLYTHSYEV 268

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (435), Expect = 2e-53
 Identities = 56/255 (21%), Positives = 103/255 (40%), Gaps = 26/255 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           R + ++AL+TG + GIG   AR   + G KV+         E +  +  S+    +    
Sbjct: 7   RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGT-LIP 65

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
             CD++ E+DI +  +   +Q+  +DI  NNAG        +L    + ++ + ++N++ 
Sbjct: 66  YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDT--LLSGSTSGWKDMFNVNVLA 123

Query: 129 AFLGRNMLLGVC-------------------GIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
             +                             ++  + TH Y+++K+ +  L +    EL
Sbjct: 124 LSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQEL 183

Query: 170 --GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD 227
              +  IR  C+SP  V T  A        +     Y   +   L+PED AEA +Y+ S 
Sbjct: 184 REAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYE--QMKCLKPEDVAEAVIYVLST 241

Query: 228 ESKCVSGHNLVVDGG 242
            +    G   +   G
Sbjct: 242 PAHIQIGDIQMRPTG 256

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  170 bits (433), Expect = 3e-53
 Identities = 65/259 (25%), Positives = 105/259 (40%), Gaps = 26/259 (10%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+ K  L+TGG +GIG      F+  GA +      +                 +G    
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTG---S 62

Query: 70  HCDVTKEKDIENAVNTAVTQY-GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
            CD +   + E  + T  + + GKLDI+ NN G +       LD    +F   +S NL  
Sbjct: 63  VCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIR--SKPTLDYTAEDFSFHISTNLES 120

Query: 129 AFLGRNMLLGVC---------------GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
           A+    +   +                G++  +    Y+++K  L  L +N A E    G
Sbjct: 121 AYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDG 180

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKCV 232
           IR N V+P  ++TPLA+      D+    + S    G   EPE+ +    +L    +  +
Sbjct: 181 IRANAVAPAVIATPLAEAVYD--DEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYI 238

Query: 233 SGHNLVVDGGFAIVNAGFS 251
           +G  + VDGG  +   GFS
Sbjct: 239 TGQTICVDGGLTV--NGFS 255

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  170 bits (432), Expect = 5e-53
 Identities = 75/250 (30%), Positives = 111/250 (44%), Gaps = 24/250 (9%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL GK A+ITG   GIG+  A  F+  GA V+++DI  D    V  +I      A     
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQA---FA 64

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
             CD+T E+++    + A+++ GK+DI+ NNAG      P   D   A+F R   +N+  
Sbjct: 65  CRCDITSEQELSALADFAISKLGKVDILVNNAGGGG---PKPFDMPMADFRRAYELNVFS 121

Query: 129 AFLGRNMLLGVCGIIGGAATHAYTSSKH---------------GLLGLMKNTAVELGRFG 173
            F    ++       GG      TS                      L++N A +LG   
Sbjct: 122 FFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKN 181

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKCV 232
           IRVN ++P A+ T   K    +  +    M  +     + +P+D A AAL+L S  +  V
Sbjct: 182 IRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWV 239

Query: 233 SGHNLVVDGG 242
           SG  L V GG
Sbjct: 240 SGQILTVSGG 249

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  168 bits (427), Expect = 1e-52
 Identities = 71/248 (28%), Positives = 109/248 (43%), Gaps = 18/248 (7%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL GK  L+TG A GIG     LF++ GA ++  D ++ L       + +          
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE------AIA 55

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQ----------AEF 118
           V  DV+  K +E     A+ ++G+L  + + AG         L  +             F
Sbjct: 56  VVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSF 115

Query: 119 ERILSINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNC 178
                   V    G  +L G    +G      Y + K G++GL +  A+EL R G+RVN 
Sbjct: 116 LVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNV 175

Query: 179 VSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLV 238
           + P  + TP+       A +   G   +  G    PE+ A+AAL+L S+ES  ++G  L 
Sbjct: 176 LLPGLIQTPMTAGLPPWAWEQEVGA--SPLGRAGRPEEVAQAALFLLSEESAYITGQALY 233

Query: 239 VDGGFAIV 246
           VDGG +IV
Sbjct: 234 VDGGRSIV 241

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  167 bits (423), Expect = 2e-51
 Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 17/256 (6%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
             QGKVA ITGG  G+G+    L S  GA+ +IA  K D+ ++  + I S + +      
Sbjct: 22  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNK--VHA 79

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV- 127
           + CDV     ++N V+  +   G  +I+ NNA          L  +  +    + +N   
Sbjct: 80  IQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTA 139

Query: 128 ---GAFLGRNMLLGVCG----------IIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
                   + +                  G        S+K G+  + K+ A E G++G+
Sbjct: 140 FVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGM 199

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKCVS 233
           R N + P  + T  A   L         M   +  G +   E+ A  A +L SD +  ++
Sbjct: 200 RFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWIN 259

Query: 234 GHNLVVDGGFAIVNAG 249
           G  +  DGG  ++ +G
Sbjct: 260 GAVIKFDGGEEVLISG 275

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  165 bits (418), Expect = 4e-51
 Identities = 74/251 (29%), Positives = 112/251 (44%), Gaps = 26/251 (10%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL+ K  LITG A GIG  T  LF+K GA+++  DI++       + +        G   
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--------GAHP 53

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  DV     +E     A+   G+LD + + AG               ++E +L +NL G
Sbjct: 54  VVMDVADPASVERGFAEALAHLGRLDGVVHYAGITR--DNFHWKMPLEDWELVLRVNLTG 111

Query: 129 AFLG--------------RNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           +FL                 +L      +G      Y +S  G++GL +  A+ELGR+GI
Sbjct: 112 SFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRWGI 171

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG 234
           RVN ++P  + T +     +   +          G   +P + A AAL+L SDES  ++G
Sbjct: 172 RVNTLAPGFIETRMTAKVPEKVREKAIAA--TPLGRAGKPLEVAYAALFLLSDESSFITG 229

Query: 235 HNLVVDGGFAI 245
             L VDGG  I
Sbjct: 230 QVLFVDGGRTI 240

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (417), Expect = 5e-51
 Identities = 63/254 (24%), Positives = 94/254 (37%), Gaps = 29/254 (11%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
           M   L G+  L+TG  +GIG  T +     GA+V+         +S+ ++         G
Sbjct: 1   MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-------G 53

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              V  D+   +  E A+       G +D++ NNA          L+  +  F+R   +N
Sbjct: 54  IEPVCVDLGDWEATERALG----SVGPVDLLVNNAAVAL--LQPFLEVTKEAFDRSFEVN 107

Query: 126 LVGAFLGRNMLL----------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           L        ++                   C          Y S+K  L  L K  A+EL
Sbjct: 108 LRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALEL 167

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES 229
           G   IRVN V+P  V T + +            +     G   E E    A L+L SD S
Sbjct: 168 GPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRS 227

Query: 230 KCVSGHNLVVDGGF 243
              +G  L V+GGF
Sbjct: 228 GMTTGSTLPVEGGF 241

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  164 bits (416), Expect = 1e-50
 Identities = 85/261 (32%), Positives = 127/261 (48%), Gaps = 24/261 (9%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L GK  +ITGGARG+G   AR     GA+V++AD+ D+ G +  +++G +        Y 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA------ARYQ 56

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
           H DVT E+D +  V  A  ++G +D + NNAG    +       ++  F +++ INL G 
Sbjct: 57  HLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVER--FRKVVEINLTGV 114

Query: 130 FLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F+G   ++                  G++G A T +Y +SK G+ GL K  AVELG   I
Sbjct: 115 FIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRI 174

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG 234
           RVN V P    TP+  +      +G     + +     EP + A A + L SD S  V+G
Sbjct: 175 RVNSVHPGMTYTPMTAETGIRQGEGNYPN-TPMGRVGNEPGEIAGAVVKLLSDTSSYVTG 233

Query: 235 HNLVVDGGFAIVNAGFSVFGK 255
             L VDGG+        V G+
Sbjct: 234 AELAVDGGWTTGPTVKYVMGQ 254

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  164 bits (415), Expect = 1e-50
 Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 26/261 (9%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+G  AL+TGG++GIG       +  GA+V      +   +   +               
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWR---EKGLNVEGS 60

Query: 70  HCDVTKEKDIENAVNTAVTQY-GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
            CD+    + +  + T    + GKL+I+ NNA     +     D  + ++  I+  N   
Sbjct: 61  VCDLLSRTERDKLMQTVAHVFDGKLNILVNNA--GVVIHKEAKDFTEKDYNIIMGTNFEA 118

Query: 129 AFLGR---------------NMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
           A+                    L  + G     +   Y++SK  +  + K+ A E  +  
Sbjct: 119 AYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDN 178

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK----GAVLEPEDAAEAALYLGSDES 229
           IRVN V+P  + TPL +  +K        + + +     G   +P++ +    +L    +
Sbjct: 179 IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAA 238

Query: 230 KCVSGHNLVVDGGFAIVNAGF 250
             ++G  +  DGGF   N GF
Sbjct: 239 SYITGQIIWADGGFT-ANGGF 258

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  163 bits (414), Expect = 2e-50
 Identities = 67/251 (26%), Positives = 97/251 (38%), Gaps = 29/251 (11%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
              G  AL+TG  +GIG  T +     GAKV+     +    S+ K+         G   
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-------GIEP 54

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           V  D+      E A+       G +D++ NNA  V       L+  +  F+R  S+NL  
Sbjct: 55  VCVDLGDWDATEKALG----GIGPVDLLVNNAALVIMQ--PFLEVTKEAFDRSFSVNLRS 108

Query: 129 ------AFLGRNMLLGVCGII----------GGAATHAYTSSKHGLLGLMKNTAVELGRF 172
                       +  GV G I                 Y+S+K  +  L K  A+ELG  
Sbjct: 109 VFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPH 168

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV 232
            IRVN V+P  V T + K      +        +      E ED   + L+L SD S   
Sbjct: 169 KIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSAST 228

Query: 233 SGHNLVVDGGF 243
           SG  ++VD G+
Sbjct: 229 SGGGILVDAGY 239

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  164 bits (415), Expect = 2e-50
 Identities = 67/264 (25%), Positives = 107/264 (40%), Gaps = 31/264 (11%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGC 66
             L+GKVAL+TG  RGIG   A    + G KV++      +  E V   I  + S A   
Sbjct: 14  ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDA--- 70

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
           + V  +V   +DI      AV  +GKLDI+ +N+G V     ++ D    EF+R+ +IN 
Sbjct: 71  ACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS--FGHVKDVTPEEFDRVFTINT 128

Query: 127 VGAFL-------------GRNMLLGVCGIIGGAATHAYTS-SKHGLLGLMKNTAVELGRF 172
            G F                 ++  + G       HA  S SK  +    +  A+++   
Sbjct: 129 RGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADK 188

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-----------GAVLEPEDAAEAA 221
            I VN V+P  + T +     +        + +                V  P D A   
Sbjct: 189 KITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVV 248

Query: 222 LYLGSDESKCVSGHNLVVDGGFAI 245
            +L S++   V+G  + +DGG  +
Sbjct: 249 CFLASNDGGWVTGKVIGIDGGACM 272

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  163 bits (413), Expect = 3e-50
 Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 20/250 (8%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           L+G+VAL+TGG+RG+G   A+  ++ G  V++A    +      + +             
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE--TMAF 60

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
            CDV+  ++++  +     ++GKLD + N AG          +    EF +++ +NL G 
Sbjct: 61  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHP--AEEFPLDEFRQVIEVNLFGT 118

Query: 130 FLGRNMLLG----------------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
           +                            +      AY +SK G+  L K  A E GR+G
Sbjct: 119 YYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYG 178

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS 233
           IRVN ++P    T + +      +     +     G    PED    A++L S+E+K V+
Sbjct: 179 IRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVT 238

Query: 234 GHNLVVDGGF 243
           G  + VDGG+
Sbjct: 239 GQIIFVDGGW 248

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  163 bits (413), Expect = 3e-50
 Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 26/263 (9%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           R   +V LITGG  G+G  TA   +  GAK+ + D+  +  E+    +  ++  A     
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAE-VLT 59

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              DV+ E  +E  V     ++G++D  FNNAG   +  P       AEF++++SINL G
Sbjct: 60  TVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPT-ESFTAAEFDKVVSINLRG 118

Query: 129 AFLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            FLG   +L                V GI G      Y ++KHG++GL +N+AVE GR+G
Sbjct: 119 VFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYG 178

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGG------MYSNLKGAVLEPEDAAEAALYLGSD 227
           IR+N ++P A+ TP+ ++ +K  D           +  N      E  + A    +L SD
Sbjct: 179 IRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSD 238

Query: 228 ESKCVSGHNLVVDGGFAIVNAGF 250
           ++  V+   + +DGG +   A +
Sbjct: 239 DASYVNATVVPIDGGQS---AAY 258

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  162 bits (411), Expect = 6e-50
 Identities = 57/263 (21%), Positives = 87/263 (33%), Gaps = 29/263 (11%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
                  K  ++TGG RGIG    R  +  GA V +          V + +G        
Sbjct: 3   FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK-- 60

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
                CDV+    +   +       G +  +  NAG    V     +    +F  +  +N
Sbjct: 61  TKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVS--VVKPATELTHEDFAFVYDVN 118

Query: 126 LVGAFL-----------------------GRNMLLGVCGIIGGAATHAYTSSKHGLLGLM 162
           + G F                          + ++    + G      Y SSK     L+
Sbjct: 119 VFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLV 178

Query: 163 KNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL 222
           K  A E    GIRVN +SP  V+T       K   D              +PE+    A+
Sbjct: 179 KGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASN--IPLNRFAQPEEMTGQAI 236

Query: 223 YLGSDESKCVSGHNLVVDGGFAI 245
            L SD +  ++G    +DGG  I
Sbjct: 237 LLLSDHATYMTGGEYFIDGGQLI 259

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  162 bits (410), Expect = 1e-49
 Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 33/264 (12%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           ++  GKV L+TG    IG  TA   ++ G  + + D+  +  E     +      A    
Sbjct: 1   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEA---R 57

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
              CDVT E+ +   V++ V  +GK+D +FNNAG      P   D    +F R+L+IN+ 
Sbjct: 58  SYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQ-DYPSDDFARVLTINVT 116

Query: 128 GAFLGRNMLLGVC---------------GIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
           GAF     +                   G+ G     AY +SK  ++ L +  A++L  +
Sbjct: 117 GAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPY 176

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--------------GAVLEPEDAA 218
            IRVN +SP  +      +        +G  Y +                    +  +  
Sbjct: 177 NIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIP 236

Query: 219 EAALYLGSDESKCVSGHNLVVDGG 242
               +L  D+S  ++G NL + GG
Sbjct: 237 GVVAFLLGDDSSFMTGVNLPIAGG 260

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  160 bits (407), Expect = 2e-49
 Identities = 40/253 (15%), Positives = 81/253 (32%), Gaps = 31/253 (12%)

Query: 15  ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT 74
           A++T      G  +A   S+ G  V   D      + +          A   +Y      
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL---------EAFAETYPQLKPM 53

Query: 75  KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRN 134
            E++    +    + YG++D++ +N     E +P I      ++   +    +  F   N
Sbjct: 54  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQP-IDKYAVEDYRGAVEALQIRPFALVN 112

Query: 135 MLLGVCGII---------------GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCV 179
            +                             YTS++ G   L    + ELG + I V  +
Sbjct: 113 AVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAI 172

Query: 180 SPYAVSTPLAKDFLKLADDGLGG-MYSNLKGAVL-----EPEDAAEAALYLGSDESKCVS 233
            P  + +  +  F             +++K           ++  E   +L S     ++
Sbjct: 173 GPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLT 232

Query: 234 GHNLVVDGGFAIV 246
           G    + GGF ++
Sbjct: 233 GQVFWLAGGFPMI 245

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  160 bits (406), Expect = 2e-49
 Identities = 93/258 (36%), Positives = 134/258 (51%), Gaps = 33/258 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL GKVAL++GGARG+G    R     GAKV+  DI D+ G+++  ++  +        Y
Sbjct: 3   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA------ARY 56

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           VH DVT+    + AV+TAVT +G L ++ NNAG ++     I D    E++RIL +NL G
Sbjct: 57  VHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN--IGTIEDYALTEWQRILDVNLTG 114

Query: 129 AFLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            FLG   ++                + G+ G  A H YT++K  + GL K+TA+ELG  G
Sbjct: 115 VFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSG 174

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS 233
           IRVN + P  V TP+     +        ++    G   EP + +   +YL SDES   +
Sbjct: 175 IRVNSIHPGLVKTPMTDWVPE-------DIFQTALGRAAEPVEVSNLVVYLASDESSYST 227

Query: 234 GHNLVVDGGFAIVNAGFS 251
           G   VVDGG     AG +
Sbjct: 228 GAEFVVDGGTV---AGLA 242

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  161 bits (407), Expect = 3e-49
 Identities = 62/261 (23%), Positives = 106/261 (40%), Gaps = 31/261 (11%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIGSSSSSASGC 66
           + L GKVAL TG  RGIG   A    + GA V++         E V  ++    +     
Sbjct: 2   KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQG--- 58

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
             +  D++K  ++    + AV+ +G LD + +N+G    V  + L+  Q  F+++ ++N 
Sbjct: 59  VAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGME--VWCDELEVTQELFDKVFNLNT 116

Query: 127 VGAFLGRNMLL-------------GVCGIIGGAATHAYTS-SKHGLLGLMKNTAVELGRF 172
            G F      L              +  ++ G   HA  + SK  + G  +  AV+ G  
Sbjct: 117 RGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAK 176

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-----------GAVLEPEDAAEAA 221
           G+ VNC++P  V T +  +       G        K             +  P D   A 
Sbjct: 177 GVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAV 236

Query: 222 LYLGSDESKCVSGHNLVVDGG 242
             L  +ES+ ++G  + + GG
Sbjct: 237 SALCQEESEWINGQVIKLTGG 257

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  160 bits (405), Expect = 4e-49
 Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 22/251 (8%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
             + KVAL+TG  RGIG   A++ +K  + V+         +SV  +I S    +   S 
Sbjct: 7   CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYES---SG 63

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              DV+K+++I   +N  +T++  +DI+ NNAG   +     + ND+  +E +L  NL  
Sbjct: 64  YAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDE--WEDVLRTNLNS 121

Query: 129 AFLGRNMLLGVC---------------GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG 173
            F     +                   G+ G      Y+SSK G++G  K+ A EL    
Sbjct: 122 LFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRN 181

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS 233
           I VN ++P  +S+ +     +     +        G +  PE+ A  A +L SD+S  ++
Sbjct: 182 ITVNAIAPGFISSDMTDKISEQIKKNIISNIP--AGRMGTPEEVANLACFLSSDKSGYIN 239

Query: 234 GHNLVVDGGFA 244
           G   V+DGG +
Sbjct: 240 GRVFVIDGGLS 250

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  160 bits (405), Expect = 5e-49
 Identities = 65/260 (25%), Positives = 108/260 (41%), Gaps = 39/260 (15%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
           GKVAL+TG A+GIG   A      GAKV + D   + G      +           ++ C
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQ-KTLFIQC 61

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           DV  ++ + +     V  +G+LDI+ NNAG  +E            +E+ L INLV    
Sbjct: 62  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEK----------NWEKTLQINLVSVIS 111

Query: 132 GRNMLL------------------GVCGIIGGAATHAYTSSKHGLLGLMKNT--AVELGR 171
           G  + L                   + G++  A    Y +SKHG++G  ++   A  L  
Sbjct: 112 GTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMN 171

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL------KGAVLEPEDAAEAALYLG 225
            G+R+N + P  V+T + +   K  + G    Y +          +L+P   A   + L 
Sbjct: 172 SGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI 231

Query: 226 SDESKCVSGHNLVVDGGFAI 245
            D++  ++G  + +     I
Sbjct: 232 EDDA--LNGAIMKITTSKGI 249

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  159 bits (403), Expect = 9e-49
 Identities = 68/259 (26%), Positives = 102/259 (39%), Gaps = 31/259 (11%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
            +VAL+TG   GIG   AR   K G +V +    ++   +  K++  +   A G     C
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADG---RTC 58

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           DV    +IE  V   V +YG +D++ NNAG          +     +  ++  NL G F 
Sbjct: 59  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA--TAELADELWLDVVETNLTGVFR 116

Query: 132 GRNMLLGVCGIIGG-----------------AATHAYTSSKHGLLGLMKNTAVELGRFGI 174
               +L   G++                        Y++SKHG++G  K   +EL R GI
Sbjct: 117 VTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 176

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK---------GAVLEPEDAAEAALYLG 225
            VN V P  V TP+A    +   D                   G  ++P + AE   YL 
Sbjct: 177 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLI 236

Query: 226 SDESKCVSGHNLVVDGGFA 244
              +  V+   L V GG  
Sbjct: 237 GPGAAAVTAQALNVCGGLG 255

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  156 bits (395), Expect = 1e-47
 Identities = 77/257 (29%), Positives = 121/257 (47%), Gaps = 22/257 (8%)

Query: 6   MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSAS 64
           M + L+GKV +ITG + G+G+  A  F+   AKV++    K+D   SV ++I      A 
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEA- 59

Query: 65  GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSI 124
               V  DVT E D+ N V +A+ ++GKLD+M NNAG  + V     +   +++ +++  
Sbjct: 60  --IAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS--HEMSLSDWNKVIDT 115

Query: 125 NLVGAFLGRNMLLGVCGIIGG----------------AATHAYTSSKHGLLGLMKNTAVE 168
           NL GAFLG    +                             Y +SK G+  + +  A+E
Sbjct: 116 NLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALE 175

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE 228
               GIRVN + P A++TP+  +     +           G + EPE+ A  A +L S E
Sbjct: 176 YAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSE 235

Query: 229 SKCVSGHNLVVDGGFAI 245
           +  V+G  L  DGG  +
Sbjct: 236 ASYVTGITLFADGGMTL 252

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  156 bits (395), Expect = 6e-47
 Identities = 57/259 (22%), Positives = 99/259 (38%), Gaps = 45/259 (17%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG---------ESVCKDIGSS 59
           R  G+V L+TG   G+G   A  F++ GA V++ D+  D           + V ++I   
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 63

Query: 60  SSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFE 119
                       +    +  E  V TA+  +G++D++ NNAG + +   +       +++
Sbjct: 64  ------GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRD--RSFSRISDEDWD 115

Query: 120 RILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKN 164
            I  ++L G+F                         GI G      Y+++K GLLGL   
Sbjct: 116 IIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANT 175

Query: 165 TAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL 224
             +E  +  I  N ++P A S            + L           L+PE  A   L+L
Sbjct: 176 LVIEGRKNNIHCNTIAPNAGSRMTETVM----PEDLVEA--------LKPEYVAPLVLWL 223

Query: 225 GSDESKCVSGHNLVVDGGF 243
             +  +  +G    V  G+
Sbjct: 224 CHESCE-ENGGLFEVGAGW 241

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  152 bits (384), Expect = 6e-46
 Identities = 66/259 (25%), Positives = 104/259 (40%), Gaps = 33/259 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL GK ALITG ARGIG   A  + + GA+V IADI  +   +   +IG +         
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA------ACA 55

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +  DVT +  I+  V   + ++G +DI+ NNA   D      +  +   ++R+ +IN+ G
Sbjct: 56  IALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRE--SYDRLFAINVSG 113

Query: 129 AFLGR----------------NMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
                                  +    G  G A    Y ++K  ++ L ++  + L R 
Sbjct: 114 TLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRH 173

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK---------GAVLEPEDAAEAALY 223
           GI VN ++P  V             D         K         G +   ED    A++
Sbjct: 174 GINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIF 233

Query: 224 LGSDESKCVSGHNLVVDGG 242
           L + E+  +      VDGG
Sbjct: 234 LATPEADYIVAQTYNVDGG 252

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  152 bits (384), Expect = 6e-46
 Identities = 43/254 (16%), Positives = 78/254 (30%), Gaps = 34/254 (13%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            L  K  +      GIG  T+R   K   K  +   + +   ++ +    + +     ++
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELK--AINPKVNITF 59

Query: 69  VHCDVT-KEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
              DVT    + +  +     Q   +DI+ N AG +D+           + ER ++IN  
Sbjct: 60  HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDD----------HQIERTIAINFT 109

Query: 128 GAFLGRNMLL------------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVEL 169
           G       +L                   V G         Y++SK  ++    + A   
Sbjct: 110 GLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLA 169

Query: 170 GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES 229
              G+    ++P    TPL   F    D         L       E           + +
Sbjct: 170 PITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCG-QNFVKAIEAN 228

Query: 230 KCVSGHNLVVDGGF 243
              +G    +D G 
Sbjct: 229 --KNGAIWKLDLGT 240

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  152 bits (384), Expect = 7e-46
 Identities = 69/258 (26%), Positives = 100/258 (38%), Gaps = 27/258 (10%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           KVAL+TG  +GIG+  A    K G  V IAD  D   ++V  +I  +   A     V  D
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHA---VAVKVD 58

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVK--------------PNILDNDQAEF 118
           V+    +  AV  A    G  D++ NNAG                     N+        
Sbjct: 59  VSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQ 118

Query: 119 ERILSINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNC 178
             + +    G            G +G      Y+SSK  + GL +  A +L   GI VN 
Sbjct: 119 AAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNG 178

Query: 179 VSPYAVSTPLAKDFLKLADDGLGGMYSNLK---------GAVLEPEDAAEAALYLGSDES 229
             P  V TP+  +  +   +  G                G + EPED A    YL S +S
Sbjct: 179 YCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDS 238

Query: 230 KCVSGHNLVVDGGFAIVN 247
             ++G +L++DGG  + N
Sbjct: 239 DYMTGQSLLIDGGM-VFN 255

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (381), Expect = 2e-45
 Identities = 73/257 (28%), Positives = 125/257 (48%), Gaps = 34/257 (13%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           RL GKV ++T  A+GIG+  A  F++ GAKV+  DI +   + + K          G   
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP--------GIQT 54

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              DVTK+K I+   N    +  +LD++FN AG V      +LD ++ +++  +++N+  
Sbjct: 55  RVLDVTKKKQIDQFAN----EVERLDVLFNVAGFVH--HGTVLDCEEKDWDFSMNLNVRS 108

Query: 129 AFLGRNMLL--------GVCGIIGGAATH--------AYTSSKHGLLGLMKNTAVELGRF 172
            +L     L        G    +   A+          Y+++K  ++GL K+ A +  + 
Sbjct: 109 MYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQ 168

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK----GAVLEPEDAAEAALYLGSDE 228
           GIR NCV P  V TP  ++ ++   +        LK    G     E+ A   +YL SDE
Sbjct: 169 GIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDE 228

Query: 229 SKCVSGHNLVVDGGFAI 245
           S  V+G+ +++DGG+++
Sbjct: 229 SAYVTGNPVIIDGGWSL 245

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  151 bits (382), Expect = 2e-45
 Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 33/263 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
           +L+G+  LITGGA G+G      F   GAKV + D   +    +  D G +         
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDN------VLG 55

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKP---NILDNDQAEFERILSIN 125
           +  DV   +D + A +  V ++GK+D +  NAG  D          ++  A F+ +  IN
Sbjct: 56  IVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHIN 115

Query: 126 LVGAFL--------------GRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGR 171
           + G                      +   G         YT++KH ++GL++  A EL  
Sbjct: 116 VKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAP 175

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK--------GAVLEPEDAAEAALY 223
           + +RVN V    +++ L                            G + E E+   A ++
Sbjct: 176 Y-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVF 234

Query: 224 LGS-DESKCVSGHNLVVDGGFAI 245
             +  ++   +G  L  DGG  +
Sbjct: 235 FATRGDAAPATGALLNYDGGLGV 257

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  147 bits (371), Expect = 5e-44
 Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 25/252 (9%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
            +GK+AL+TG +RGIG   A   +  GAKV+     ++  +++   +G++         +
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGAN------GKGL 55

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             +VT    IE+ +     ++G++DI+ NNAG   +           E+  I+  NL   
Sbjct: 56  MLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLM--RMKDEEWNDIIETNLSSV 113

Query: 130 FL--------------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F               GR + +G V G +G      Y ++K GL+G  K+ A E+   GI
Sbjct: 114 FRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGI 173

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG 234
            VN V+P  + T + +        G+        G +   ++ A A  +L SDE+  ++G
Sbjct: 174 TVNVVAPGFIETDMTRALSDDQRAGILAQVP--AGRLGGAQEIANAVAFLASDEAAYITG 231

Query: 235 HNLVVDGGFAIV 246
             L V+GG  +V
Sbjct: 232 ETLHVNGGMYMV 243

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  144 bits (364), Expect = 4e-43
 Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 38/251 (15%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           ++ K  L+   +RGIG   A + S+ GA+V I    ++L +             SG  YV
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK------------RSGHRYV 49

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
            CD+ K+      ++    +  ++DI+  NAG          +    +F+  +    +  
Sbjct: 50  VCDLRKD------LDLLFEKVKEVDILVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNM 101

Query: 130 FLGRNMLLGVC---------------GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
                  L                   I      +   S++  L G +K  + E+  +GI
Sbjct: 102 IKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGI 161

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDAAEAALYLGSDESKCVS 233
            VNCV+P    T   K+   L+++    + S +    + +PE+ A    +L S+++  ++
Sbjct: 162 TVNCVAPGWTETERVKEL--LSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLT 219

Query: 234 GHNLVVDGGFA 244
           G  +VVDGG +
Sbjct: 220 GQTIVVDGGLS 230

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  144 bits (364), Expect = 6e-43
 Identities = 63/258 (24%), Positives = 102/258 (39%), Gaps = 26/258 (10%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSY 68
           L+GKVA++TG   GIG   A   +  GA +++    D    E V   +  ++       Y
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGL--AAQHGVKVLY 59

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNN---------AGTVDEVKPNILDNDQAEFE 119
              D++K + +   V+ AV Q G++DI+ NN              E    IL  + +   
Sbjct: 60  DGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVF 119

Query: 120 RILSINLVGAFLGRNMLLGVCGIIGGAATH----AYTSSKHGLLGLMKNTAVELGRFGIR 175
              +  L          +       G        AY ++KHG++G  K TA+E    GI 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179

Query: 176 VNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLK----------GAVLEPEDAAEAALYLG 225
            N + P  V TPL +  +    +  G                    + PE     A++L 
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA 239

Query: 226 SDESKCVSGHNLVVDGGF 243
           SD +  ++G  + VDGG+
Sbjct: 240 SDAAAQITGTTVSVDGGW 257

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (355), Expect = 1e-41
 Identities = 54/243 (22%), Positives = 89/243 (36%), Gaps = 35/243 (14%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           + + G++ LITG   GIG  TA  F+K  +K+++ DI     E          +      
Sbjct: 3   KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKV---H 59

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
               D +  +DI ++      + G + I+ NNAG V     ++      + E+   +N++
Sbjct: 60  TFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVV--YTSDLFATQDPQIEKTFEVNVL 117

Query: 128 GAFLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRF 172
             F      L                  G +      AY SSK   +G  K    EL   
Sbjct: 118 AHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAAL 177

Query: 173 ---GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES 229
              G++  C+ P  V+T   K+             S   G  LEPE+     ++    E 
Sbjct: 178 QITGVKTTCLCPNFVNTGFIKN------------PSTSLGPTLEPEEVVNRLMHGILTEQ 225

Query: 230 KCV 232
           K +
Sbjct: 226 KMI 228

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  140 bits (353), Expect = 2e-41
 Identities = 58/248 (23%), Positives = 102/248 (41%), Gaps = 33/248 (13%)

Query: 10  LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
              +  L+TGG RGIG   A+  +  G KV +        +              G   V
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK--------------GLFGV 50

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
             DVT    ++ A        G ++++ +NA         ++   + +FE++++ NL GA
Sbjct: 51  EVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA--GLSADAFLMRMTEEKFEKVINANLTGA 108

Query: 130 F--------------LGRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGI 174
           F               GR + +G V G+ G      Y +SK G++G+ ++ A EL +  +
Sbjct: 109 FRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANV 168

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG 234
             N V+P  + T + +   +    G           V  P + A    +L S+++  +SG
Sbjct: 169 TANVVAPGYIDTDMTRALDERIQQGALQFIP--AKRVGTPAEVAGVVSFLASEDASYISG 226

Query: 235 HNLVVDGG 242
             + VDGG
Sbjct: 227 AVIPVDGG 234

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  137 bits (346), Expect = 2e-40
 Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 24/250 (9%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHC 71
            V ++TG +RGIG+  A    K G KVL+   +     E V K I +    A        
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQA---ITFGG 58

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           DV+KE D+E  + TA+  +G +D++ NN          ++   +++++ ++ +NL G FL
Sbjct: 59  DVSKEADVEAMMKTAIDAWGTIDVVVNN--AGITRDTLLIRMKKSQWDEVIDLNLTGVFL 116

Query: 132 GRNMLLG---------------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV 176
                                 V G+IG      Y ++K G++G  K  A E     I V
Sbjct: 117 CTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINV 176

Query: 177 NCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYL-GSDESKCVSGH 235
           N V P  +++ +     +  +  + G      G   +PE+ A    +L  S  +  ++G 
Sbjct: 177 NVVCPGFIASDMTAKLGEDMEKKILGTIP--LGRTGQPENVAGLVEFLALSPAASYITGQ 234

Query: 236 NLVVDGGFAI 245
              +DGG AI
Sbjct: 235 AFTIDGGIAI 244

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  136 bits (343), Expect = 8e-40
 Identities = 53/269 (19%), Positives = 94/269 (34%), Gaps = 39/269 (14%)

Query: 14  VALITGGARGIGECTARLFSKHGAKVLIADIK-DDLGESVCKDIGSSS--SSASGCSYVH 70
            A+ITGGAR IG   A    + G +V++     +   + +  ++ ++   S+      + 
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 71  CDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFE---------RI 121
              +     E+ ++ +   +G+ D++ NNA           D+     +          +
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 122 LSINLVGAFL--------------------GRNMLLGVCGIIGGAATHAYTSSKHGLLGL 161
              N V                            L      +       YT +KH L GL
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 162 MKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSN--LKGAVLEPEDAAE 219
            +  A+EL    IRVN V+P     P A     +  +          L  +       A+
Sbjct: 183 TRAAALELAPRHIRVNAVAPGLSLLPPA-----MPQETQEEYRRKVPLGQSEASAAQIAD 237

Query: 220 AALYLGSDESKCVSGHNLVVDGGFAIVNA 248
           A  +L S ++  ++G  L VDGG  +  A
Sbjct: 238 AIAFLVSKDAGYITGTTLKVDGGLILARA 266

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  132 bits (332), Expect = 3e-38
 Identities = 47/254 (18%), Positives = 89/254 (35%), Gaps = 40/254 (15%)

Query: 13  KVALITGGARGIGECTARLFSKHGAK-------VLIADIKDDLGESVCKDIGSSSSSASG 65
            + LITG  +GIG   A  F++           ++++       E +  +  +  +    
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTD- 60

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
              +  D++   D+       V +YG +D + NN          + D  + +F+  ++ N
Sbjct: 61  --TITADISDMADVRRLTTHIVERYGHIDCLVNN--AGVGRFGALSDLTEEDFDYTMNTN 116

Query: 126 LVGAFLGRNMLL---------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
           L G F     L                 V        +  Y  SK G  GL++   +   
Sbjct: 117 LKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYAR 176

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
           +  +R+  V P AV TP+            G +   ++  ++ PED A   +      S+
Sbjct: 177 KCNVRITDVQPGAVYTPM-----------WGKVDDEMQALMMMPEDIAAPVVQAYLQPSR 225

Query: 231 CVSGHNLV--VDGG 242
            V    ++    G 
Sbjct: 226 TVVEEIILRPTSGD 239

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  129 bits (324), Expect = 5e-37
 Identities = 45/258 (17%), Positives = 86/258 (33%), Gaps = 21/258 (8%)

Query: 6   MLRRLQGKVALITG--GARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSA 63
           +   L GK AL+ G    R +G   A    + GA+V ++   + L     K   +     
Sbjct: 2   LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGG-- 59

Query: 64  SGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKP--NILDNDQAEFERI 121
                   DVT++++++         +G LD + +              +D  + ++   
Sbjct: 60  --ALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLA 117

Query: 122 LSINLVGAFLGRNMLL-------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVE 168
           L ++                                    +    +K  L   ++  A E
Sbjct: 118 LEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYE 177

Query: 169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE 228
           LG  G+RVN +S   V T  A+              +      +  E+     L+L S  
Sbjct: 178 LGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPL 237

Query: 229 SKCVSGHNLVVDGGFAIV 246
           +  ++G  + VD G+ I+
Sbjct: 238 ASGITGEVVYVDAGYHIM 255

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  125 bits (315), Expect = 7e-36
 Identities = 62/252 (24%), Positives = 102/252 (40%), Gaps = 40/252 (15%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           + AL+TGGA G+G   A      G +V++ D++ +  + +               YV  D
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLI---------------YVEGD 46

Query: 73  VTKEKDIENAVNTAVTQ-YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           VT+E+D+  AV  A  +      +     G  +++      +    F R+L +NL+G F 
Sbjct: 47  VTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFN 106

Query: 132 G-----------RNMLLGVCGII----------GGAATHAYTSSKHGLLGLMKNTAVELG 170
                            G  G+I          G     AY +SK G++ L    A EL 
Sbjct: 107 VLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELA 166

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
            +GIRV  V+P    TPL +   + A   L          +  PE+ A   L++   E+ 
Sbjct: 167 GWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQ-VPFPPRLGRPEEYAALVLHI--LENP 223

Query: 231 CVSGHNLVVDGG 242
            ++G  + +DG 
Sbjct: 224 MLNGEVVRLDGA 235

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (315), Expect = 2e-35
 Identities = 46/233 (19%), Positives = 79/233 (33%), Gaps = 30/233 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            LQGK  ++TG ++GIG   A   +K GA V++     +  + V          A+   Y
Sbjct: 11  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC--LELGAASAHY 68

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
           +   +      E  V  A    G LD++  N  T   +  N+  +D     + + +N + 
Sbjct: 69  IAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSL--NLFHDDIHHVRKSMEVNFLS 126

Query: 129 AFLGRNMLL--------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG--RF 172
             +     L               + G +      AY++SK  L G   +   E    R 
Sbjct: 127 YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRV 186

Query: 173 GIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG 225
            + +       + T  A      A  G+  M           E+ A   +  G
Sbjct: 187 NVSITLCVLGLIDTETAMK----AVSGIVHM------QAAPKEECALEIIKGG 229

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  124 bits (312), Expect = 3e-35
 Identities = 45/259 (17%), Positives = 96/259 (37%), Gaps = 32/259 (12%)

Query: 9   RLQGKVALITGGARGIGECTARLFSK---HGAKVLIADIKDDLGESVCKDIGSSSSSASG 65
            L   V ++TG +RG G   A   ++    G+ +L++   + +   + +++G+       
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK- 61

Query: 66  CSYVHCDVTKEKDIENAVNT----AVTQYGKLDIMFNNAGTVDEVKP-NILDNDQAEFER 120
                 D+  E  ++  ++        +  +  ++ NNA T+ +V    +  ND AE   
Sbjct: 62  VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN 121

Query: 121 ILSINLVGAFLGRNMLL-----------------GVCGIIGGAATHAYTSSKHGLLGLMK 163
             ++NL       +  L                  +C +        Y + K     L +
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQ 181

Query: 164 NTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD-GLGGMYSNLK--GAVLEPEDAAEA 220
             A E     +RV   +P  +   + +   + + D  L      LK  GA+++   +A+ 
Sbjct: 182 VLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQK 239

Query: 221 ALYLGSDESKCVSGHNLVV 239
            L L   ++   SG ++  
Sbjct: 240 LLGLLQKDT-FQSGAHVDF 257

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  123 bits (309), Expect = 9e-35
 Identities = 53/256 (20%), Positives = 88/256 (34%), Gaps = 22/256 (8%)

Query: 9   RLQGKVALITGGAR--GIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGC 66
            L GK  L+TG A    I    A+   + GA++      D L   V +      S     
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGS----D 57

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKP---NILDNDQAEFERILS 123
             + CDV ++  I+         + K D   ++ G     +     +    +  F+    
Sbjct: 58  IVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHD 117

Query: 124 INLVGAFL----GRNMLLGVCGII---------GGAATHAYTSSKHGLLGLMKNTAVELG 170
           I+           R+ML     ++              +    +K  L   ++  A  +G
Sbjct: 118 ISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG 177

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK 230
             G+RVN +S   + T  A                      +  ED   +A +L SD S 
Sbjct: 178 PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSA 237

Query: 231 CVSGHNLVVDGGFAIV 246
            +SG  + VDGGF+I 
Sbjct: 238 GISGEVVHVDGGFSIA 253

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  120 bits (301), Expect = 9e-34
 Identities = 36/260 (13%), Positives = 72/260 (27%), Gaps = 44/260 (16%)

Query: 11  QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVH 70
           + +  L+ GG   +G    + F      V   D+ ++               AS    V 
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN-------------EEASASVIVK 47

Query: 71  CDVTKEKDIENAVNTAVTQYG--KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              +  +  +          G  K+D +   AG           +     + +   ++  
Sbjct: 48  MTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNA-KSKSLFKNCDLMWKQSIWT 106

Query: 129 AFLG-------------RNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG--RFG 173
           + +                +      + G      Y  +K  +  L ++ A +      G
Sbjct: 107 STISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSG 166

Query: 174 IRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS 233
                V P  + TP+ +  +  AD            +    E   E      +   +  S
Sbjct: 167 AAAIAVLPVTLDTPMNRKSMPEAD----------FSSWTPLEFLVETFHDWITGNKRPNS 216

Query: 234 GHNLVV---DGGFAIVNAGF 250
           G  + V   DG   +  A F
Sbjct: 217 GSLIQVVTTDGKTELTPAYF 236

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 2e-32
 Identities = 57/253 (22%), Positives = 97/253 (38%), Gaps = 26/253 (10%)

Query: 8   RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCS 67
           R ++G VA+ITGGA G+G  TA      GA  ++ D+ +  GE+  K +G++   A    
Sbjct: 1   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV 60

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
               DV     +       V        +   + T +  K      +   F+R+L +NL+
Sbjct: 61  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLED--FQRVLDVNLM 118

Query: 128 GAFLG-----RNMLLG----------------VCGIIGGAATHAYTSSKHGLLGLMKNTA 166
           G F         M                   V    G     AY++SK G++G+    A
Sbjct: 119 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 178

Query: 167 VELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS 226
            +L   GIRV  ++P    TPL     +   + L          + +P + A     +  
Sbjct: 179 RDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVP-FPSRLGDPAEYAHLVQAI-- 235

Query: 227 DESKCVSGHNLVV 239
            E+  ++G  + +
Sbjct: 236 IENPFLNGEVIRL 248

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  115 bits (289), Expect = 1e-31
 Identities = 51/258 (19%), Positives = 93/258 (36%), Gaps = 21/258 (8%)

Query: 9   RLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGC 66
            L+GK  LI G A  + I    A+     GA +    + + L + V + I    +S    
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRV-RPIAQELNSPYVY 60

Query: 67  SYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINL 126
                DV+KE+  ++  N+     G LD + ++     +        + ++     ++ +
Sbjct: 61  ---ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEI 117

Query: 127 VGAFLGRNMLLGVCGIIGGAAT---------------HAYTSSKHGLLGLMKNTAVELGR 171
               L          +  GA+                +    +K  L   ++  AV+LG+
Sbjct: 118 SVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGK 177

Query: 172 FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC 231
             IRVN +S   + T  +               +      +  E+   A +YL S  S  
Sbjct: 178 HHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSG 237

Query: 232 VSGHNLVVDGGFAIVNAG 249
           VSG    VD G+ ++  G
Sbjct: 238 VSGEVHFVDAGYHVMGMG 255

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  113 bits (283), Expect = 4e-31
 Identities = 41/267 (15%), Positives = 70/267 (26%), Gaps = 61/267 (22%)

Query: 12  GKVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
               ++TG  RGIG    +   K      ++      +    +     S          +
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDS------RVHVL 56

Query: 70  HCDVTKEKDIENAVNTAVTQYGK--LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
              VT +K ++  V+      G   L ++ NNAG +        + ++A     L +N  
Sbjct: 57  PLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGT-NTEPNRAVIAEQLDVNTT 115

Query: 128 GAFLGRNMLL---------------------------------GVCGIIGGAATHAYTSS 154
              L    LL                                             AY  S
Sbjct: 116 SVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMS 175

Query: 155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEP 214
           K  +    +  AV+L    + V    P  V T L                   K A L  
Sbjct: 176 KAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG-----------------KNAALTV 218

Query: 215 EDAAEAALYLGSDESKCVSGHNLVVDG 241
           E +    +   +      +G   + + 
Sbjct: 219 EQSTAELISSFNKLDNSHNGRFFMRNL 245

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  106 bits (266), Expect = 1e-28
 Identities = 35/249 (14%), Positives = 75/249 (30%), Gaps = 43/249 (17%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
           GKV ++ GG   +G      F K+G  VL  D+  +               A     V  
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSAN-------------DQADSNILVDG 48

Query: 72  DVTKEKDIENAVNTAVT--QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGA 129
           +    +  ++ +    +  Q  ++D +F  AG           +     + ++  ++  +
Sbjct: 49  NKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSA-SSKDFVKNADLMIKQSVWSS 107

Query: 130 FLGRNMLLGVC-------------GIIGGAATHAYTSSKHGLLGLMKNTAVELGRFG--I 174
            +   +                   +    +   Y  +K  +  L  + A +        
Sbjct: 108 AIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNS 167

Query: 175 RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL-YLGSDESKCVS 233
            V  + P  + TP+ + ++  AD                    +E  L +     S+  S
Sbjct: 168 AVLTIMPVTLDTPMNRKWMPNADHSSWT----------PLSFISEHLLKWTTETSSRPSS 217

Query: 234 GHNLVVDGG 242
           G  L +   
Sbjct: 218 GALLKITTE 226

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  105 bits (261), Expect = 8e-28
 Identities = 44/264 (16%), Positives = 87/264 (32%), Gaps = 32/264 (12%)

Query: 9   RLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASG 65
            L GK  L++G      I    AR+  + GA++++    +  L + +   + +    A  
Sbjct: 3   LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAK---APL 59

Query: 66  CSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSIN 125
                 +      +   V  A+    KLD + ++ G + +    I     A +  +    
Sbjct: 60  LELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGI 119

Query: 126 LVGAF---------------LGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
            + A+                G  + +         A +  T +K  L  + +  A E G
Sbjct: 120 HISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAG 179

Query: 171 RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSN-----------LKGAVLEPEDAAE 219
           ++G+R N V+   + T      +  A     G               +   + +    A+
Sbjct: 180 KYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAK 239

Query: 220 AALYLGSDESKCVSGHNLVVDGGF 243
               L SD     +G  +  DGG 
Sbjct: 240 TVCALLSDWLPATTGDIIYADGGA 263

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  105 bits (262), Expect = 1e-27
 Identities = 51/284 (17%), Positives = 92/284 (32%), Gaps = 52/284 (18%)

Query: 14  VALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSAS-------- 64
           VAL+TG A+ +G   A      G  V +   +      ++   + +   +++        
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 65  -------GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG----------TVDEVK 107
                    +     VT        V    T +G+ D++ NNA             D  +
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 108 PNILDNDQAE--FERILSINLVGAFLGRNMLLGVCGII---------------------G 144
           P + D +  E     +   N +  +                                   
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 145 GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY 204
                 YT +K  L GL ++ A+EL    IRVN V P         D      +G     
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL--VDDMPPAVWEGHRSKV 241

Query: 205 SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA 248
             L        + ++  ++L S ++K ++G  + VDGG+++  A
Sbjct: 242 P-LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTRA 284

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (257), Expect = 5e-27
 Identities = 48/283 (16%), Positives = 81/283 (28%), Gaps = 83/283 (29%)

Query: 13  KVALITGGARGIGECTARLFSK-HGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC 71
            VAL+TGG +GIG    R   +     V++       G++  + + +   S     +   
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSP---RFHQL 60

Query: 72  DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFL 131
           D+   + I    +    +YG LD++ NNAG   +V          + E  +  N  G   
Sbjct: 61  DIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVA--DPTPFHIQAEVTMKTNFFGTRD 118

Query: 132 GRNMLL-------------GVCGIIGGAATHAYTSS------------------------ 154
               LL              +  +    +                               
Sbjct: 119 VCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTK 178

Query: 155 -----------------KHGLLGLMKNTAVELGR----FGIRVNCVSPYAVSTPLAKDFL 193
                            K G+  L +  A +L        I +N   P  V T +A    
Sbjct: 179 KGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK- 237

Query: 194 KLADDGLGGMYSNLKGAVLEPEDAAEAALYL--GSDESKCVSG 234
                           A   PE+ AE  +YL     +++   G
Sbjct: 238 ----------------ATKSPEEGAETPVYLALLPPDAEGPHG 264

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (254), Expect = 1e-26
 Identities = 45/246 (18%), Positives = 84/246 (34%), Gaps = 29/246 (11%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADI---KDDLGESVCKDIGSSSSSASGCSYV 69
            V LITG + GIG   A   +   ++                + +   + +        +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 70  HCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL--SINLV 127
             DV   K +  A          + +     G +  ++    D   +  +  +  ++ ++
Sbjct: 63  QLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRML 122

Query: 128 GAFL--------GRNMLLG-VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNC 178
            AFL        GR ++ G V G++G      Y +SK  L GL ++ AV L  FG+ ++ 
Sbjct: 123 QAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSL 182

Query: 179 VSPYAVSTPLAKDFLKLADDGLGGMYSN---------------LKGAVLEPEDAAEAALY 223
           +    V T   +  L   ++ L     +                + A   PE+ AE  L 
Sbjct: 183 IECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLT 242

Query: 224 LGSDES 229
                 
Sbjct: 243 ALRAPK 248

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  100 bits (249), Expect = 6e-26
 Identities = 56/270 (20%), Positives = 90/270 (33%), Gaps = 56/270 (20%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
            + +I+G A GIG  T ++    G +++  DI+D                      V  D
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA--------------------EVIAD 41

Query: 73  VTKEKDIENAVNTAVTQYGK-LDIMFNNAG---------TVDEVKPNILDNDQAEFERIL 122
           ++  +  + A+   + +  K +D +   AG          V  V           F   L
Sbjct: 42  LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPAL 101

Query: 123 SINLVGA-----------------FLGRNMLLGVCGIIGGAATH--------AYTSSKHG 157
                 A                  L   +  G          H        AY  SK+ 
Sbjct: 102 KKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNA 161

Query: 158 LLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPED 216
           L   ++  A   G  G+R+N ++P A  TPL +  L+    G     +    G   EP +
Sbjct: 162 LTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSE 221

Query: 217 AAEAALYLGSDESKCVSGHNLVVDGGFAIV 246
            A    +L S  +  V G  +V+DGG   V
Sbjct: 222 MASVIAFLMSPAASYVHGAQIVIDGGIDAV 251

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 94.2 bits (232), Expect = 3e-23
 Identities = 43/325 (13%), Positives = 87/325 (26%), Gaps = 89/325 (27%)

Query: 11  QGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSS--------- 59
              +  I G     G G   A+  SK   K++           +                
Sbjct: 1   NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

Query: 60  --------------------SSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNN 99
                                      +    ++ +   IE+  N    +YGK++++ ++
Sbjct: 61  DKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHS 120

Query: 100 AGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGIIGGAATH---------- 149
                EV+ ++L+  +  +   LS +           + +        +           
Sbjct: 121 LANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVP 180

Query: 150 ----AYTSSKHGLLGLMKNTAVELGRF-GIRVNCVSPYAVSTPLAK---DFLKLADDGLG 201
                 +S+K  L    +  A  LGR   IR+N +S   + +  A          ++   
Sbjct: 181 GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN 240

Query: 202 GMYSNLK----------------------------------------GAVLEPEDAAEAA 221
              +  +                                           L   D    A
Sbjct: 241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVA 300

Query: 222 LYLGSDESKCVSGHNLVVDGGFAIV 246
            +L S ES+ ++G  + VD G  I+
Sbjct: 301 SFLLSRESRAITGQTIYVDNGLNIM 325

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 88.6 bits (218), Expect = 1e-21
 Identities = 41/264 (15%), Positives = 69/264 (26%), Gaps = 56/264 (21%)

Query: 13  KVALITGGARGIGECTARLF---SKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
              LITG  RG+G    +      +    +       +  + +         + S    +
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA----KNHSNIHIL 58

Query: 70  HCDVTKEKDIEN--AVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
             D+      +   A    VT+   L+++FNN   +      I      E    L  N V
Sbjct: 59  EIDLRNFDAYDKLVADIEGVTKDQGLNVLFNN-AGIAPKSARITAVRSQELLDTLQTNTV 117

Query: 128 GAFLGRNMLL-----------------------------GVCGIIGGAATHAYTSSKHGL 158
              +     L                             G          +AY +SK  L
Sbjct: 118 VPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSAL 177

Query: 159 LGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAA 218
               K+ +V+L    I    + P  V T +      L                       
Sbjct: 178 NAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPT-------------STGQIV 224

Query: 219 EAALYLGSDESKCVSGHNLVVDGG 242
           +    LG  +    +G  +  DG 
Sbjct: 225 QTISKLGEKQ----NGGFVNYDGT 244

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 84.8 bits (208), Expect = 5e-20
 Identities = 44/288 (15%), Positives = 82/288 (28%), Gaps = 46/288 (15%)

Query: 9   RLQGKVALITGGA--RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGC 66
            L+GK A I G A   G G   A+  +  GA++L+      L              +   
Sbjct: 5   DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64

Query: 67  -----------------------------SYVHCDVTKEKDIENAVNTAVTQYGKLDIMF 97
                                        +      +    ++ A       +G +DI+ 
Sbjct: 65  PDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124

Query: 98  NNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC--------------GII 143
           ++     EV   +L+  +  +   +S +        +  L +                 I
Sbjct: 125 HSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI 184

Query: 144 GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM 203
                   +S+K  L    +  A E GR                 A   +   D  +   
Sbjct: 185 IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYS 244

Query: 204 YSNLK-GAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGF 250
           Y+N      L  ++   AA +L S  +  ++G  + VD G   +    
Sbjct: 245 YNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGVAL 292

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 68.1 bits (165), Expect = 3e-14
 Identities = 31/224 (13%), Positives = 58/224 (25%), Gaps = 31/224 (13%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLI----ADIKDDLGESVCKDIGSSSSSASGCS 67
               L+TGG  G+G   AR  ++ GA  L+    +    D    +  ++       +  +
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAEL------EALGA 62

Query: 68  YVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV 127
                     D E+           + +              +        ER     ++
Sbjct: 63  RTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVL 122

Query: 128 GAFLGRNMLLG-----------VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRV 176
           GA     +                   G      Y      L GL    A +    G+  
Sbjct: 123 GARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGL----AQQRRSDGLPA 178

Query: 177 NCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEA 220
             V+    +         +A+  +   +       + PE A  A
Sbjct: 179 TAVAWGTWAGSG------MAEGPVADRFRRHGVIEMPPETACRA 216

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 59.7 bits (143), Expect = 2e-11
 Identities = 17/190 (8%), Positives = 50/190 (26%), Gaps = 17/190 (8%)

Query: 13  KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
           +VA + GG   +G+  A   +  G ++++   +++  E+   +    +  A   S     
Sbjct: 2   RVA-LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDA---SITGMK 57

Query: 73  VTKEKDIENAVNTAVTQYGKLDIMFNN-------------AGTVDEVKPNILDNDQAEFE 119
                +  +     +     +D   +                     K     ++++  E
Sbjct: 58  NEDAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAE 117

Query: 120 RILSINLVGAFLGRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCV 179
            +  +      +     +             +     G     K   + L      +  +
Sbjct: 118 IVAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPL 177

Query: 180 SPYAVSTPLA 189
               +S    
Sbjct: 178 DAGPLSNSRL 187

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 53.7 bits (128), Expect = 2e-09
 Identities = 23/177 (12%), Positives = 51/177 (28%), Gaps = 32/177 (18%)

Query: 9   RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSY 68
            ++GK A++  G   +G  +A L +  GA+V++   K D  ++    +          + 
Sbjct: 20  SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK----VNV 75

Query: 69  VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVG 128
              +   +     AV            +F            +    QA ++   SI +V 
Sbjct: 76  TAAETADDASRAEAV-------KGAHFVFTAGA------IGLELLPQAAWQNESSIEIVA 122

Query: 129 AFL---------------GRNMLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELG 170
            +                G+           G         +  +  L +++     
Sbjct: 123 DYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHRACIAKLFESSEGVFD 179

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 40.2 bits (92), Expect = 1e-04
 Identities = 13/70 (18%), Positives = 21/70 (30%), Gaps = 4/70 (5%)

Query: 10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYV 69
           QGK   +TG     G   +      GA V        L       +  ++  A G    
Sbjct: 6  WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKG----YSLTAPTVPSLFETARVADGMQSE 61

Query: 70 HCDVTKEKDI 79
            D+  +  +
Sbjct: 62 IGDIRDQNKL 71

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 40.1 bits (93), Expect = 1e-04
 Identities = 37/199 (18%), Positives = 60/199 (30%), Gaps = 21/199 (10%)

Query: 16  LITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK 75
           LITGGA  IG    R   K+    ++    D L  +   +  S  S ++  ++ H D+  
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNI--DKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 76  EKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL-SINLVGAFLGRN 134
             +I            + D + + A     V  +I          I+ +  L+       
Sbjct: 62  SAEITRIFEQY-----QPDAVMHLAAESH-VDRSITGPAAFIETNIVGTYALLEVARKYW 115

Query: 135 MLLGVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIR----VNCVSPYAVSTPLAK 190
             LG          H  T   +G L         +              SPY+ S     
Sbjct: 116 SALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSAS----- 170

Query: 191 DFLKLADDGLGGMYSNLKG 209
              K + D L   +    G
Sbjct: 171 ---KASSDHLVRAWRRTYG 186

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.7 bits (91), Expect = 2e-04
 Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 3/75 (4%)

Query: 13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKD---IGSSSSSASGCSYV 69
          K+ALITG     G          G +V     +     +   +   I   + + +     
Sbjct: 2  KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61

Query: 70 HCDVTKEKDIENAVN 84
          + D+T    +   ++
Sbjct: 62 YADLTDASSLRRWID 76

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.5 bits (88), Expect = 5e-04
 Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
          K+ L+TGGA  IG  T     ++G   ++AD   +        +     +     +   D
Sbjct: 2  KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARL--EVLTKHHIPFYEVD 59

Query: 73 VTKEKDIENA 82
          +   K +E  
Sbjct: 60 LCDRKGLEKV 69

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.4 bits (87), Expect = 6e-04
 Identities = 17/100 (17%), Positives = 25/100 (25%), Gaps = 14/100 (14%)

Query: 12  GKVALITGGARGIGECTARLFSKHGAKVLIAD------IKDDLGESVCKDIGSSSSSAS- 64
           G   ++ GG    G  TA   SK   +V I D          LG      I S     S 
Sbjct: 1   GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR 60

Query: 65  -------GCSYVHCDVTKEKDIENAVNTAVTQYGKLDIMF 97
                         D+   + +  +  +            
Sbjct: 61  WKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQ 100

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (87), Expect = 6e-04
 Identities = 13/75 (17%), Positives = 23/75 (30%), Gaps = 3/75 (4%)

Query: 13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKD---IGSSSSSASGCSYV 69
           VALITG     G   A    + G +V     +     +   +       +         
Sbjct: 2  NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 70 HCDVTKEKDIENAVN 84
          + D+T    +   +N
Sbjct: 62 YGDLTDSTCLVKIIN 76

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 37.8 bits (86), Expect = 0.001
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 4/72 (5%)

Query: 13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
          K+ LITGG   +G   A      G  +++    D+L      D     SS     +VH D
Sbjct: 2  KL-LITGGCGFLGSNLASFALSQGIDLIVF---DNLSRKGATDNLHWLSSLGNFEFVHGD 57

Query: 73 VTKEKDIENAVN 84
          +  + D+   + 
Sbjct: 58 IRNKNDVTRLIT 69

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 37.5 bits (86), Expect = 0.001
 Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 2/74 (2%)

Query: 13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLG--ESVCKDIGSSSSSASGCSYVH 70
          KVALITG     G   A    + G +V     +      E V        +        +
Sbjct: 2  KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 71 CDVTKEKDIENAVN 84
           D++   ++   + 
Sbjct: 62 GDLSDTSNLTRILR 75

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 7/86 (8%)

Query: 16  LITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK 75
           L+TGG+  IG  T     ++G  V+I D   +   SV   I          ++V  D+  
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI--ERLGGKHPTFVEGDIRN 61

Query: 76  EKDIENAVNTAVTQYGKLDIMFNNAG 101
           E  +       +     +D + + AG
Sbjct: 62  EALMTE-----ILHDHAIDTVIHFAG 82

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.1 bits (82), Expect = 0.003
 Identities = 12/69 (17%), Positives = 21/69 (30%), Gaps = 3/69 (4%)

Query: 13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCD 72
          + AL+TG     G   A+L  + G +V           S  +             Y   D
Sbjct: 1  RSALVTGITGQDGAYLAKLLLEKGYRVHGL---VARRSSDTRWRLRELGIEGDIQYEDGD 57

Query: 73 VTKEKDIEN 81
          +     ++ 
Sbjct: 58 MADACSVQR 66

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	257
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.81
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.81
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.71
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.71
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.7
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.68
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.67
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.66
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.66
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.65
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.64
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.64
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.64
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.62
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.62
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.62
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.61
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.61
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.6
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.59
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.59
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.58
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.52
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.45
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.44
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.3
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.28
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.28
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.18
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.08
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.85
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.83
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.23
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.2
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.19
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.18
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.13
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.1
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.05
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.02
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.02
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.97
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.94
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.88
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.86
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.83
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.78
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.78
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.71
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.71
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.66
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.63
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.57
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.5
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.49
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.43
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.42
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.41
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.41
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.38
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.35
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.31
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.3
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.3
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.26
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.22
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.2
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.11
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.06
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.04
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.04
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	97.04
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.03
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.0
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.95
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.84
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.76
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.75
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.75
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.75
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.73
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.72
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.72
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.66
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.6
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.59
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.55
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.32
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.28
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.15
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.09
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.09
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.05
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.03
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.01
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	95.98
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.97
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.91
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	95.9
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	95.89
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	95.86
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.84
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.82
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.78
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.77
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.67
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.62
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	95.62
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.61
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.59
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.58
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	95.53
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.51
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.49
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.48
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.46
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.45
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.37
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.28
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.28
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	95.24
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.2
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.14
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	95.13
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.12
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.11
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.02
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.97
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	94.95
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.91
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.87
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	94.85
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.81
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.8
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.75
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.69
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.68
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.65
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.58
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.48
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	94.44
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.35
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	94.23
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.06
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	93.95
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.86
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.69
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	93.56
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	93.52
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.48
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	93.36
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.34
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	93.25
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.23
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	93.12
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.04
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	93.02
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.01
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.97
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.84
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	92.74
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	92.7
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.5
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	92.44
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.36
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	92.33
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.31
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	92.24
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	92.19
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	91.96
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.86
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	91.77
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	91.7
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	91.65
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	91.55
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	91.4
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.31
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	91.27
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	91.2
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.18
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	91.09
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.68
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	90.66
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	90.65
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.41
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	90.33
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	90.08
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	90.08
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.74
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	89.69
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	89.64
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	89.59
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	89.55
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	89.54
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	89.54
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	89.52
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	89.47
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	89.42
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	89.33
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	88.79
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	88.76
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	88.66
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	88.63
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	88.41
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	87.97
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	87.93
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	87.81
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.8
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	87.74
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	87.69
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	87.59
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	87.48
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	87.45
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	87.27
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	87.22
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	86.89
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	86.54
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	86.31
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	86.26
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	86.25
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	86.2
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	86.02
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	85.66
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	85.54
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	85.48
d1qo0d_	189	Positive regulator of the amidase operon AmiR {Pse	85.4
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	85.28
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	85.03
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	84.8
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	84.69
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	84.57
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	84.35
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	84.26
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	84.08
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	84.01
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	83.9
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	83.59
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	83.02
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	82.98
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	82.75
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	82.24
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	81.88
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	81.72
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	81.66
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.57
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	81.55
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	80.78
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	80.61
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	80.43
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	80.29
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	80.18
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	80.14

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=4.8e-53  Score=346.56  Aligned_cols=236  Identities=32%  Similarity=0.466  Sum_probs=207.1

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch-hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD-LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      |..+|+||++|||||++|||+++|++|+++|++|++++|+.+ .++++.++++..+   .++..+++|++|+++++++++
T Consensus         1 M~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g---~~~~~~~~Dvt~~~~v~~~~~   77 (261)
T d1geea_           1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG---GEAIAVKGDVTVESDVINLVQ   77 (261)
T ss_dssp             CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHH
Confidence            556899999999999999999999999999999999999864 5677788886654   348899999999999999999


Q ss_pred             HHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCC
Q 044485           85 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAAT  148 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~  148 (257)
                      ++.+++|+||+||||||...+  .++.+.+.++|++.+++|+.+++++.+.+.                |..+..+.+..
T Consensus        78 ~~~~~~G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~  155 (261)
T d1geea_          78 SAIKEFGKLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF  155 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTC
T ss_pred             HHHHHhCCCCEeeccceecCC--cchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccc
Confidence            999999999999999998765  789999999999999999999999877662                45566677888


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      ..|++||+|+.+|+|+|+.|++++|||||+|+||+++|++..................|.+|+.+|+|+|++++||+|+.
T Consensus       156 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~  235 (261)
T d1geea_         156 VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSE  235 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             cccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCch
Confidence            89999999999999999999999999999999999999998765433222111112567889999999999999999999


Q ss_pred             CCcccccEEEecCceeee
Q 044485          229 SKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~~  246 (257)
                      ++++||+++.+|||+++.
T Consensus       236 s~~itG~~i~vDGG~sl~  253 (261)
T d1geea_         236 ASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             GTTCCSCEEEESTTGGGC
T ss_pred             hcCCcCCeEEECCCeeCC
Confidence            999999999999999884

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.3e-52  Score=342.23  Aligned_cols=233  Identities=27%  Similarity=0.418  Sum_probs=203.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+..+  .++.++++|++|+++++++++++.
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~   78 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG--VETMAFRCDVSNYEEVKKLLEAVK   78 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999888877754332  348899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhc-cccCCCCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCG-IIGGAATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~-~~~~~~~~~y  151 (257)
                      +++|+||+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.               |..+ ..+.+....|
T Consensus        79 ~~~g~iDiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y  156 (251)
T d1vl8a_          79 EKFGKLDTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAY  156 (251)
T ss_dssp             HHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccch
Confidence            999999999999998654  789999999999999999999999988773               3333 3355667899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ++||+|+++|+|+|+.|++++|||||+|+||+++|++.+......+.........|.+|+.+|+|+|++++||+|+.+++
T Consensus       157 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~  236 (251)
T d1vl8a_         157 AASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKY  236 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCC
Confidence            99999999999999999999999999999999999998765443221111112577899999999999999999999999


Q ss_pred             ccccEEEecCcee
Q 044485          232 VSGHNLVVDGGFA  244 (257)
Q Consensus       232 ~~G~~~~~dgG~~  244 (257)
                      +||+++.+|||++
T Consensus       237 itG~~i~vDGG~t  249 (251)
T d1vl8a_         237 VTGQIIFVDGGWT  249 (251)
T ss_dssp             CCSCEEEESTTGG
T ss_pred             CcCcEEEeCcCee
Confidence            9999999999985

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=5.4e-52  Score=340.19  Aligned_cols=229  Identities=29%  Similarity=0.445  Sum_probs=203.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .||++|||||++|||+++|++|+++|++|++++|+++.++++.++++..+   .++..+++|++|+++++++++++.+++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g---~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG---VEADGRTCDVRSVPEIEALVAAVVERY   77 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            48999999999999999999999999999999999999999999987654   348999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------------hhhccccCCCCchhhh
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------------s~~~~~~~~~~~~y~~  153 (257)
                      |+||+||||||....  .++.+.+.|+|++.+++|+.+++++.+.++                 |..+..+.+....|++
T Consensus        78 g~iDilVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~a  155 (257)
T d2rhca1          78 GPVDVLVNNAGRPGG--GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSA  155 (257)
T ss_dssp             CSCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCCEEEecccccCC--CChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHH
Confidence            999999999998765  789999999999999999999999977663                 4556677788899999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc--------cccCcc-ccccCCCCCHHHHHHHHHHh
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD--------GLGGMY-SNLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~a~~~~~l  224 (257)
                      ||+|+.+|+|+|+.|++++|||||+|+||+++|+|..........        ....+. ..|.+|+.+|+|+|++++||
T Consensus       156 sKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL  235 (257)
T d2rhca1         156 SKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL  235 (257)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999998765433211        111111 57789999999999999999


Q ss_pred             cCCCCCcccccEEEecCcee
Q 044485          225 GSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       225 ~s~~~~~~~G~~~~~dgG~~  244 (257)
                      +|+.++++||+++.+|||++
T Consensus       236 ~S~~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         236 IGPGAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             TSGGGTTCCSCEEEESTTCC
T ss_pred             hCchhcCCcCceEEECcCcc
Confidence            99999999999999999974

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-52  Score=338.98  Aligned_cols=227  Identities=28%  Similarity=0.485  Sum_probs=204.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ||+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++..      ++..+.+|++|+++++++++++.+
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~   74 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGA------NGKGLMLNVTDPASIESVLEKIRA   74 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG------GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC------CCcEEEEEecCHHHhhhhhhhhhc
Confidence            58899999999999999999999999999999999999999999888843      378899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~~  153 (257)
                      ++|+||+||||||....  .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+...+|++
T Consensus        75 ~~g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~a  152 (243)
T d1q7ba_          75 EFGEVDILVNNAGITRD--NLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAA  152 (243)
T ss_dssp             HTCSCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred             ccCCcceehhhhhhccc--cccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHH
Confidence            99999999999998765  78999999999999999999999998777               35667778888999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      ||+|+++|+|+++.|++++|||||+|+||+++|++.+..........  ....|.+|+.+|+|+|++++||+|+.++++|
T Consensus       153 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~--~~~~pl~R~~~pedvA~~v~fL~S~~s~~it  230 (243)
T d1q7ba_         153 AKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGI--LAQVPAGRLGGAQEIANAVAFLASDEAAYIT  230 (243)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHH--HTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHH--HhcCCCCCCCCHHHHHHHHHHHhCchhcCCc
Confidence            99999999999999999999999999999999999876543322111  1156788999999999999999999999999


Q ss_pred             ccEEEecCceee
Q 044485          234 GHNLVVDGGFAI  245 (257)
Q Consensus       234 G~~~~~dgG~~~  245 (257)
                      ||+|.+|||+++
T Consensus       231 Gq~i~vdGG~~~  242 (243)
T d1q7ba_         231 GETLHVNGGMYM  242 (243)
T ss_dssp             SCEEEESTTSSC
T ss_pred             CCeEEECCCeEe
Confidence            999999999876

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=4.1e-52  Score=340.61  Aligned_cols=234  Identities=32%  Similarity=0.515  Sum_probs=204.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++....+ ..++..+++|++|+++++++++++.+
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~-~~~~~~~~~Dvt~~~~v~~~~~~~~~   79 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP-DAEVLTTVADVSDEAQVEAYVTATTE   79 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT-TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-CCeEEEEeccCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999888887755432 23588999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~~  153 (257)
                      ++|+||+||||||+..+. .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+....|++
T Consensus        80 ~~G~iDiLVnnAG~~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  158 (258)
T d1iy8a_          80 RFGRIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAA  158 (258)
T ss_dssp             HHSCCSEEEECCCCCCCC-BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHH
T ss_pred             HhCCCCEEEECCcccccC-CchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHH
Confidence            999999999999976432 57889999999999999999999998766               35667778888999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc-----cccCcc-ccccCCCCCHHHHHHHHHHhcCC
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD-----GLGGMY-SNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ||+|+.+|+|+|+.|++++|||||+|+||+++|++.+........     ....+. ..|.+|+.+|+|+|++++||+|+
T Consensus       159 sKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~  238 (258)
T d1iy8a_         159 AKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSD  238 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999999998765443211     111111 46778999999999999999999


Q ss_pred             CCCcccccEEEecCcee
Q 044485          228 ESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~  244 (257)
                      .++++||++|.+|||++
T Consensus       239 ~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         239 DASYVNATVVPIDGGQS  255 (258)
T ss_dssp             GGTTCCSCEEEESTTTT
T ss_pred             hhcCCcCceEEcCcchh
Confidence            99999999999999986

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2e-52  Score=339.37  Aligned_cols=225  Identities=32%  Similarity=0.501  Sum_probs=200.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++        +..+.||++|+++++++++++.+
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~--------~~~~~~Dv~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--------AHPVVMDVADPASVERGFAEALA   73 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT--------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--------CeEEEEecCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999999998888877663        67899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYTSS  154 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~~s  154 (257)
                      ++|+||+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+.              +..+..+.++...|++|
T Consensus        74 ~~g~iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~~~~Y~as  151 (242)
T d1ulsa_          74 HLGRLDGVVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAAS  151 (242)
T ss_dssp             HHSSCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCHHHHHH
T ss_pred             hcCCceEEEECCccccc--CchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCCCcchHHH
Confidence            99999999999998765  789999999999999999999999988773              34456677888899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSG  234 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G  234 (257)
                      |+|+.+|+|+|+.|++++|||||+|+||+++|++.+...+...+.  .....|.+|+.+|+|+|++++||+|+.++++||
T Consensus       152 Kaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~--~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG  229 (242)
T d1ulsa_         152 MAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREK--AIAATPLGRAGKPLEVAYAALFLLSDESSFITG  229 (242)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHH--HHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHH--HHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCC
Confidence            999999999999999999999999999999999976543221111  111567889999999999999999999999999


Q ss_pred             cEEEecCceee
Q 044485          235 HNLVVDGGFAI  245 (257)
Q Consensus       235 ~~~~~dgG~~~  245 (257)
                      +++.+|||+++
T Consensus       230 ~~i~vDGG~t~  240 (242)
T d1ulsa_         230 QVLFVDGGRTI  240 (242)
T ss_dssp             CEEEESTTTTT
T ss_pred             cEEEECCCccC
Confidence            99999999875

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.1e-52  Score=339.46  Aligned_cols=230  Identities=32%  Similarity=0.439  Sum_probs=204.1

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++..++   ++.++++|++|+++++++++++
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~---~~~~~~~Dvs~~~~~~~~~~~~   82 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG---QAFACRCDITSEQELSALADFA   82 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC---cEEEEEccCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999999999999987643   4889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y  151 (257)
                      .+.+|++|+||||||....  .++ +.+.++|++.+++|+.+++++.+.+               +|..+..+.+....|
T Consensus        83 ~~~~g~iDilvnnAG~~~~--~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y  159 (255)
T d1fmca_          83 ISKLGKVDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSY  159 (255)
T ss_dssp             HHHHSSCCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHH
T ss_pred             HHHcCCCCEeeeCCcCCCC--Ccc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccc
Confidence            9999999999999998754  444 7899999999999999999997766               356677788888999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      ++||+|+.+|+|+|+.|++++|||||+|+||+++|++.+......  ...... ..|.+|+.+|+|+|++++||+|+.++
T Consensus       160 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e--~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~  237 (255)
T d1fmca_         160 ASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE--IEQKMLQHTPIRRLGQPQDIANAALFLCSPAAS  237 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHH--HHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHH--HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            999999999999999999999999999999999999876543211  111111 56788999999999999999999999


Q ss_pred             cccccEEEecCcee
Q 044485          231 CVSGHNLVVDGGFA  244 (257)
Q Consensus       231 ~~~G~~~~~dgG~~  244 (257)
                      ++||+++.+|||..
T Consensus       238 ~itG~~i~vDGG~~  251 (255)
T d1fmca_         238 WVSGQILTVSGGGV  251 (255)
T ss_dssp             TCCSCEEEESTTSC
T ss_pred             CCcCCEEEECcCcc
Confidence            99999999999974

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=6e-52  Score=338.46  Aligned_cols=232  Identities=29%  Similarity=0.444  Sum_probs=203.2

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+++.++++.++++..+   .++..+.+|++|++++++++++
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g---~~~~~~~~Dvt~~~~v~~~~~~   80 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG---YESSGYAGDVSKKEEISEVINK   80 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT---CCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999999999999997654   3489999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~  150 (257)
                      +.+.+|++|+||||||....  .++.+.+.++|++++++|+.+++++.+.+               +|..+..+.+....
T Consensus        81 ~~~~~g~iDilvnnag~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~  158 (251)
T d2c07a1          81 ILTEHKNVDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQAN  158 (251)
T ss_dssp             HHHHCSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHH
T ss_pred             HHHhcCCceeeeeccccccc--cccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHH
Confidence            99999999999999998765  78899999999999999999999997766               35667778888899


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      |++||+|+++|+|+|+.|++++|||||+|+||+++|++.....+......  ....|.+|+.+|+|+|++++||+|+.++
T Consensus       159 Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~--~~~~pl~R~~~pedvA~~v~fL~S~~s~  236 (251)
T d2c07a1         159 YSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNI--ISNIPAGRMGTPEEVANLACFLSSDKSG  236 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHH--HTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHH--HhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            99999999999999999999999999999999999999765432211111  1156788999999999999999999999


Q ss_pred             cccccEEEecCcee
Q 044485          231 CVSGHNLVVDGGFA  244 (257)
Q Consensus       231 ~~~G~~~~~dgG~~  244 (257)
                      ++||++|.+|||++
T Consensus       237 ~itG~~i~vDGG~s  250 (251)
T d2c07a1         237 YINGRVFVIDGGLS  250 (251)
T ss_dssp             TCCSCEEEESTTSC
T ss_pred             CCcCcEEEECCCcC
Confidence            99999999999974

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=8.8e-52  Score=338.52  Aligned_cols=230  Identities=29%  Similarity=0.444  Sum_probs=204.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.      .++..+++|++|+++++++++++.+
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~------~~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG------PAACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHC------TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC------CceEEEEeeCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999988883      2488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------------HhhhccccCCCCchhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------------LGVCGIIGGAATHAYT  152 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------------~s~~~~~~~~~~~~y~  152 (257)
                      ++|+||+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+                +|..+..+.+....|+
T Consensus        76 ~~g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  153 (256)
T d1k2wa_          76 RWGSIDILVNNAALFDL--APIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYC  153 (256)
T ss_dssp             HHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCccEEEeecccccc--cccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchh
Confidence            99999999999998765  78999999999999999999999987765                3556777788889999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc--------ccCcc-ccccCCCCCHHHHHHHHHH
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG--------LGGMY-SNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~a~~~~~  223 (257)
                      +||+|+++|+|+|+.|++++|||||+|+||+++|++.+.........        ...+. ..|.+|+.+|+|+|++++|
T Consensus       154 asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~f  233 (256)
T d1k2wa_         154 ATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIF  233 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999976554321111        11111 4678999999999999999


Q ss_pred             hcCCCCCcccccEEEecCceeee
Q 044485          224 LGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      |+|+.++++||++|.+|||.+|+
T Consensus       234 L~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         234 LATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             TTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HhCchhCCccCceEEECcchhhC
Confidence            99999999999999999998763

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.2e-51  Score=334.69  Aligned_cols=223  Identities=41%  Similarity=0.673  Sum_probs=202.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++..      ++.++++|++|+++++++++++.
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~   75 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD------AARYVHLDVTQPAQWKAAVDTAV   75 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG------GEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhC------cceEEEeecCCHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999999999988888743      37889999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~  152 (257)
                      +++|++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+....|+
T Consensus        76 ~~~g~idilinnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~  153 (244)
T d1nffa_          76 TAFGGLHVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYT  153 (244)
T ss_dssp             HHHSCCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             HHhCCCeEEEECCcccCC--CchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchh
Confidence            999999999999998765  78999999999999999999999998766               3566777888899999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      ++|+|+++|+|+++.|++++|||||+|+||+++|++.....+       .....|.+|+.+|+|+|++++||+|+.++++
T Consensus       154 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~-------~~~~~pl~R~~~p~diA~~v~fL~s~~s~~i  226 (244)
T d1nffa_         154 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE-------DIFQTALGRAAEPVEVSNLVVYLASDESSYS  226 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT-------TCSCCSSSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             hHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH-------HHHhccccCCCCHHHHHHHHHHHhChhhCCC
Confidence            999999999999999999999999999999999998754322       2225678899999999999999999999999


Q ss_pred             cccEEEecCceee
Q 044485          233 SGHNLVVDGGFAI  245 (257)
Q Consensus       233 ~G~~~~~dgG~~~  245 (257)
                      ||+++.+|||++.
T Consensus       227 tG~~i~vDGG~~a  239 (244)
T d1nffa_         227 TGAEFVVDGGTVA  239 (244)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCCEEEECCCeec
Confidence            9999999999864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.8e-52  Score=339.48  Aligned_cols=237  Identities=25%  Similarity=0.397  Sum_probs=185.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++....   .++..+.+|++++++++++++++.
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG---FQVTGSVCDASLRPEREKLMQTVS   80 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEeccCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999887654   248999999999999999999999


Q ss_pred             HHc-CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           88 TQY-GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      +++ |++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.               |..+..+.+....|
T Consensus        81 ~~~~g~idilvnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y  158 (259)
T d1xq1a_          81 SMFGGKLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIY  158 (259)
T ss_dssp             HHHTTCCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHH
T ss_pred             HHhCCCcccccccccccCC--CchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccc
Confidence            998 689999999998765  789999999999999999999999987763               45566677788899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +++|+|+.+|+|+|+.|++++|||||+|+||+++|++.......  +...... ..|.+|+.+|+|+|++++||+|+.++
T Consensus       159 ~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~--~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~  236 (259)
T d1xq1a_         159 SATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD--EFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAAS  236 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------CCGGGGHHHHHHHTSGGGT
T ss_pred             cccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchH--HHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999998765332  1122222 56788999999999999999999999


Q ss_pred             cccccEEEecCceeeeeccee
Q 044485          231 CVSGHNLVVDGGFAIVNAGFS  251 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~~~~~~  251 (257)
                      ++||+++.+|||+++.+..++
T Consensus       237 ~iTG~~i~vDGG~s~~g~~~~  257 (259)
T d1xq1a_         237 YITGQTICVDGGLTVNGFSYQ  257 (259)
T ss_dssp             TCCSCEEECCCCEEETTEEEC
T ss_pred             CCcCcEEEeCCCEECCCCCCC
Confidence            999999999999998765554

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=1.8e-51  Score=336.56  Aligned_cols=228  Identities=30%  Similarity=0.470  Sum_probs=202.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |++|||||++|||+++|++|+++|++|++++|+++.++++.++++..+   .++..+++|++|+++++++++++.+++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG---GHAVAVKVDVSDRDQVFAAVEQARKTLGG   78 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            788999999999999999999999999999999999999999987654   34889999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------------HhhhccccCCCCchhhhhHH
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------------LGVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------------~s~~~~~~~~~~~~y~~sK~  156 (257)
                      ||+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+                +|..+..+.+....|++||+
T Consensus        79 iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  156 (255)
T d1gega_          79 FDVIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKF  156 (255)
T ss_dssp             CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             ccEEEeccccccc--CcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHH
Confidence            9999999998755  78999999999999999999999987765                24566677888899999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccc--------cCcc-ccccCCCCCHHHHHHHHHHhcCC
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGL--------GGMY-SNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      |+.+|+|+|+.|++++|||||+|+||+++|++.........+..        ..+. ..|.+|+.+|+|+|++++||+|+
T Consensus       157 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~  236 (255)
T d1gega_         157 AVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASP  236 (255)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999876544322111        1111 56788999999999999999999


Q ss_pred             CCCcccccEEEecCceee
Q 044485          228 ESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~  245 (257)
                      .++++||+++.+|||+.+
T Consensus       237 ~a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         237 DSDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             GGTTCCSCEEEESSSSSC
T ss_pred             hhCCccCcEEEecCCEEe
Confidence            999999999999999864

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.1e-51  Score=338.46  Aligned_cols=233  Identities=25%  Similarity=0.344  Sum_probs=206.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++..+   .++..+++|++|+++++++++++.
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g---~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG---FKVEASVCDLSSRSERQELMNTVA   80 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CCceEEEeeCCCHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999887654   347889999999999999999999


Q ss_pred             HHcC-CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchh
Q 044485           88 TQYG-KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~~-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y  151 (257)
                      ++++ ++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+....|
T Consensus        81 ~~~~~~idilvnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y  158 (259)
T d2ae2a_          81 NHFHGKLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVY  158 (259)
T ss_dssp             HHTTTCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhCCCceEEEECCceecc--CccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccch
Confidence            9987 79999999998765  78999999999999999999999987766               355677778888999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh--ccccCcc-ccccCCCCCHHHHHHHHHHhcCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD--DGLGGMY-SNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      +++|+|+++|+|+|+.|++++|||||+|+||+++|++.+.......  +....+. ..|.+|+.+|+|+|++++||+|+.
T Consensus       159 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~  238 (259)
T d2ae2a_         159 GATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPA  238 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999999999876543211  1122222 577899999999999999999999


Q ss_pred             CCcccccEEEecCceee
Q 044485          229 SKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~  245 (257)
                      ++++||++|.+|||++.
T Consensus       239 s~~itG~~i~VDGG~~a  255 (259)
T d2ae2a_         239 ASYVTGQIIYVDGGLMA  255 (259)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hCCCcCcEEEECCCeEe
Confidence            99999999999999865

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1e-51  Score=340.57  Aligned_cols=243  Identities=49%  Similarity=0.819  Sum_probs=208.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++...+    .+.++.||++|+++++++++++.+
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~   78 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD----VISFVHCDVTKDEDVRNLVDTTIA   78 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT----TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC----ceEEEEccCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999999999999999986532    377899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCC-chhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAAT-HAYT  152 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~-~~y~  152 (257)
                      ++|++|+||||||.....+..+.+.+.++|++.+++|+.+++++.+.+.               +..+..+.++. ..|+
T Consensus        79 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~  158 (268)
T d2bgka1          79 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYT  158 (268)
T ss_dssp             HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHH
T ss_pred             HcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccc
Confidence            9999999999999876544568899999999999999999999987773               34444444443 4799


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccC---ccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGG---MYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      +||+|+++|+|+|+.|++++|||||+|+||+++|++..............   ....+.+|+.+|+|+|++++||+|+.+
T Consensus       159 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s  238 (268)
T d2bgka1         159 ATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDES  238 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGG
T ss_pred             hhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhh
Confidence            99999999999999999999999999999999999876543322211111   113466789999999999999999999


Q ss_pred             CcccccEEEecCceeeeecceeeccc
Q 044485          230 KCVSGHNLVVDGGFAIVNAGFSVFGK  255 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~~~~~~~~~~~  255 (257)
                      .++|||+|.+|||++..++.|-..++
T Consensus       239 ~~itGq~i~VDGG~t~~~p~~p~~~~  264 (268)
T d2bgka1         239 KYVSGLNLVIDGGYTRTNPAFPTALK  264 (268)
T ss_dssp             TTCCSCEEEESTTGGGCCTHHHHHSC
T ss_pred             CCccCceEEECcCcccCCCCChhhhh
Confidence            99999999999999999987765443

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=2.3e-51  Score=334.23  Aligned_cols=229  Identities=29%  Similarity=0.395  Sum_probs=188.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +|+||++|||||++|||+++|++|+++|++|++++|++...  ..++++..+   .++..+.+|++|+++++++++++.+
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~~g---~~~~~~~~Dvs~~~~v~~~~~~~~~   76 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNLG---RRVLTVKCDVSQPGDVEAFGKQVIS   76 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHcC---CcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999987532  223333332   3488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~~  153 (257)
                      .+|+||+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+....|++
T Consensus        77 ~~G~iDilVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~a  154 (247)
T d2ew8a1          77 TFGRCDILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYIS  154 (247)
T ss_dssp             HHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchh
Confidence            99999999999998765  78999999999999999999999998777               35667778888899999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      ||+|+.+|+|+|+.|++++|||||+|+||+++|++.+................+.+|+.+|+|+|++++||+|+.++++|
T Consensus       155 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~it  234 (247)
T d2ew8a1         155 TKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFIT  234 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCC
T ss_pred             hhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCc
Confidence            99999999999999999999999999999999999865433222211112234677899999999999999999999999


Q ss_pred             ccEEEecCcee
Q 044485          234 GHNLVVDGGFA  244 (257)
Q Consensus       234 G~~~~~dgG~~  244 (257)
                      |+++.+|||++
T Consensus       235 G~~i~vDGG~~  245 (247)
T d2ew8a1         235 GQTLAVDGGMV  245 (247)
T ss_dssp             SCEEEESSSCC
T ss_pred             CCeEEECCCEe
Confidence            99999999975

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-51  Score=336.36  Aligned_cols=229  Identities=31%  Similarity=0.580  Sum_probs=201.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.       ++.++.+|++|+++++++++++.+
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~-------~~~~~~~Dvs~~~~v~~~~~~~~~   75 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-------GAVFILCDVTQEDDVKTLVSETIR   75 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-------TEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-------CCeEEEccCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999999999888888764       278899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH--------------HhhhccccCCCCchhhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML--------------LGVCGIIGGAATHAYTSS  154 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~--------------~s~~~~~~~~~~~~y~~s  154 (257)
                      ++|+||+||||||.... ..++.+.+.++|++.+++|+.+++++.+.+              +|..+..+.+....|+++
T Consensus        76 ~~g~iDilVnnAG~~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~~~Y~as  154 (250)
T d1ydea1          76 RFGRLDCVVNNAGHHPP-PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVAT  154 (250)
T ss_dssp             HHSCCCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             hcCCCCEEEeccccccc-ccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCcchhHHH
Confidence            99999999999997543 256889999999999999999999998776              355666778888999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc---cccCc-cccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD---GLGGM-YSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      |+|+.+|+|+|+.|++++|||||+|+||+++|++.+......++   ..... ...|.+|+.+|+|+|++++||+|+ ++
T Consensus       155 Kaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~  233 (250)
T d1ydea1         155 KGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-AN  233 (250)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CT
T ss_pred             HhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cC
Confidence            99999999999999999999999999999999998765433221   11111 256788999999999999999997 78


Q ss_pred             cccccEEEecCceeee
Q 044485          231 CVSGHNLVVDGGFAIV  246 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~  246 (257)
                      ++||+++.+|||+++.
T Consensus       234 ~itG~~i~vDGG~~lG  249 (250)
T d1ydea1         234 FCTGIELLVTGGAELG  249 (250)
T ss_dssp             TCCSCEEEESTTTTSC
T ss_pred             CCcCCeEEECCCcccC
Confidence            9999999999998763

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=8.9e-51  Score=331.47  Aligned_cols=229  Identities=33%  Similarity=0.569  Sum_probs=203.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...    .++.++++|++|+++++++++++.+
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP----DQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCC----CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999999998888542    2489999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------------HhhhccccCCCCchhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------------LGVCGIIGGAATHAYT  152 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------------~s~~~~~~~~~~~~y~  152 (257)
                      .+|+||+||||||....  .++.+.+.++|++.+++|+.+++++.+.+                +|..+..+.+....|+
T Consensus        79 ~~G~iDiLVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~  156 (251)
T d1zk4a1          79 AFGPVSTLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYN  156 (251)
T ss_dssp             HHSSCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCceEEEeccccccc--cchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHH
Confidence            99999999999998765  78999999999999999999999998776                3455667778888999


Q ss_pred             hhHHHHHHHHHHHHHH--hccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          153 SSKHGLLGLMKNTAVE--LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e--~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +||+|+.+|+|+++.|  ++++|||||+|+||+++|++......... ........|.+|+.+|+|+|++++||+|+.++
T Consensus       157 asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~-~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~  235 (251)
T d1zk4a1         157 ASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEE-AMSQRTKTPMGHIGEPNDIAYICVYLASNESK  235 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHH-HHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHH-HHHHHhCCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            9999999999999998  56899999999999999999876543222 11222356788999999999999999999999


Q ss_pred             cccccEEEecCcee
Q 044485          231 CVSGHNLVVDGGFA  244 (257)
Q Consensus       231 ~~~G~~~~~dgG~~  244 (257)
                      ++||++|.+|||++
T Consensus       236 ~itG~~i~vDGG~t  249 (251)
T d1zk4a1         236 FATGSEFVVDGGYT  249 (251)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             CCcCcEEEECcccc
Confidence            99999999999985

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-51  Score=338.69  Aligned_cols=241  Identities=24%  Similarity=0.380  Sum_probs=210.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCC--CCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSS--SSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....  ..+.++..+.+|++|+++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999998888876432  12346899999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hhhccccCCCCchhh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~~~~~~~~~~~~y~  152 (257)
                      .+.+|++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.              +..+..+.+....|+
T Consensus        89 ~~~~G~iDiLVnnAg~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~~~~~Y~  166 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSG  166 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTTCHHHH
T ss_pred             HHHhCCeEEEEeecccccc--CchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccccccccch
Confidence            9999999999999998765  789999999999999999999999987773              233445567778999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh-ccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD-DGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      ++|+|+.+|+|+++.|++++|||||+|+||+++|++......... +...... ..|.+|+.+|+|+|++++||+|+.+.
T Consensus       167 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s~  246 (297)
T d1yxma1         167 AARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAAS  246 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGT
T ss_pred             hHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            999999999999999999999999999999999998765544332 2223332 56789999999999999999999999


Q ss_pred             cccccEEEecCceeeeeccee
Q 044485          231 CVSGHNLVVDGGFAIVNAGFS  251 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~~~~~~  251 (257)
                      ++||++|.+|||.++....|.
T Consensus       247 ~iTG~~i~VDGG~sl~~~~~~  267 (297)
T d1yxma1         247 FITGQSVDVDGGRSLYTHSYE  267 (297)
T ss_dssp             TCCSCEEEESTTGGGCBTTCC
T ss_pred             CcCCcEEEeCcChhhhcCCCC
Confidence            999999999999999866655

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.1e-50  Score=330.01  Aligned_cols=226  Identities=31%  Similarity=0.494  Sum_probs=196.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.. +..+++.        ..++++|++|+++++++++++.+
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~~--------~~~~~~Dv~~~~~v~~~~~~~~~   72 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAIG--------GAFFQVDLEDERERVRFVEEAAY   72 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHHT--------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHcC--------CeEEEEeCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999998754 3445442        56789999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      ++|+||+||||||...+  .++.+.+.|+|++.+++|+.+++++.+.+.               |..+..+.+....|++
T Consensus        73 ~~G~iDiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  150 (248)
T d2d1ya1          73 ALGRVDVLVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNA  150 (248)
T ss_dssp             HHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHH
T ss_pred             hcCCCCeEEEeCcCCCC--CChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHH
Confidence            99999999999998765  789999999999999999999999987773               5566777888899999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh--ccccC-cc-ccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD--DGLGG-MY-SNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--~~~~~-~~-~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      +|+|+++|+|+|+.|++++|||||+|+||+++|++.+.......  +.... +. ..|.+|+.+|+|+|++++||+|+.+
T Consensus       151 sKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s  230 (248)
T d2d1ya1         151 SKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKA  230 (248)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999999999999999999999876543211  11111 11 5677899999999999999999999


Q ss_pred             CcccccEEEecCceee
Q 044485          230 KCVSGHNLVVDGGFAI  245 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~~  245 (257)
                      +++||++|.+|||++.
T Consensus       231 ~~itG~~i~vDGG~ta  246 (248)
T d2d1ya1         231 SFITGAILPVDGGMTA  246 (248)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCCCcEEEcCcCccc
Confidence            9999999999999864

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=3.4e-51  Score=335.96  Aligned_cols=231  Identities=30%  Similarity=0.486  Sum_probs=195.1

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      |+||++|||||++|||+++|++|+++|++|++++|++ +.++++.+++....+  .++.++++|++|+++++++++++.+
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG--VKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT--SCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999975 566777776654332  3488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~~  153 (257)
                      ++|+||+||||||....  .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+....|++
T Consensus        80 ~~G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~a  157 (260)
T d1x1ta1          80 QMGRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVA  157 (260)
T ss_dssp             HHSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HhCCCcEEEeecccccC--CchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhh
Confidence            99999999999998765  78999999999999999999999997776               36667778888899999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh--------ccccCcc--ccccCCCCCHHHHHHHHHH
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD--------DGLGGMY--SNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--------~~~~~~~--~~~~~~~~~~~~~a~~~~~  223 (257)
                      ||+|+.+|+|+|+.|++++|||||+|+||+++|++.........        +.....+  ..|.+|+.+|+|+|++++|
T Consensus       158 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~f  237 (260)
T d1x1ta1         158 AKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVF  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHH
T ss_pred             hhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999765533211        1111111  5678899999999999999


Q ss_pred             hcCCCCCcccccEEEecCcee
Q 044485          224 LGSDESKCVSGHNLVVDGGFA  244 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~  244 (257)
                      |+|+.++++||+++.+|||++
T Consensus       238 L~S~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         238 LASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGG
T ss_pred             HhChhhCCCcCCEEEECcchh
Confidence            999999999999999999975

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.3e-50  Score=330.47  Aligned_cols=231  Identities=37%  Similarity=0.544  Sum_probs=204.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.      .++.++++|++++++++++++++.+
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG------DAARYQHLDVTIEEDWQRVVAYARE   75 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG------GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC------CceEEEEcccCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999999998888887763      2488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~~  153 (257)
                      ++|+||+||||||....  .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+....|++
T Consensus        76 ~~g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~a  153 (254)
T d1hdca_          76 EFGSVDGLVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGA  153 (254)
T ss_dssp             HHSCCCEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCccEEEecCccccc--cccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHH
Confidence            99999999999998765  78999999999999999999999997776               35667778888899999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCC-CHHHHHHHHHHhcCCCCCcc
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~~~l~s~~~~~~  232 (257)
                      ||+|+.+|+|+|+.|++++|||||+|+||+++|++.........  .......|.+|+. .|+|+|++++||+|+.++++
T Consensus       154 sKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~--~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~i  231 (254)
T d1hdca_         154 SKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQG--EGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYV  231 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCS--TTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHH--HHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCC
Confidence            99999999999999999999999999999999999876533211  1112256778886 69999999999999999999


Q ss_pred             cccEEEecCceeeeecce
Q 044485          233 SGHNLVVDGGFAIVNAGF  250 (257)
Q Consensus       233 ~G~~~~~dgG~~~~~~~~  250 (257)
                      ||+++.+|||++. +|.+
T Consensus       232 tG~~i~vDGG~t~-gp~~  248 (254)
T d1hdca_         232 TGAELAVDGGWTT-GPTV  248 (254)
T ss_dssp             CSCEEEESTTTTT-SCCH
T ss_pred             CCceEEeCCCccC-CCCc
Confidence            9999999999875 4444

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.5e-51  Score=338.09  Aligned_cols=238  Identities=28%  Similarity=0.376  Sum_probs=206.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++...+....++..+.+|++|+++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999887665555689999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~  153 (257)
                      ++|+||+||||||.....+..+.+.+.|+|++.+++|+.+++.+.+.+.               +..+..+.+....|++
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~a  160 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYAC  160 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHH
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehh
Confidence            9999999999999865544566778999999999999999999977772               3455667778889999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh------hccccC-ccccccCCCCCHHHHHHHHHHhcC
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA------DDGLGG-MYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      +|+|+.+|+|+|+.|++++|||||+|+||+++|++........      .+.... ....|.+|+.+|+|+|++++||+|
T Consensus       161 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S  240 (274)
T d1xhla_         161 AKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD  240 (274)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999876542111      111111 114678999999999999999999


Q ss_pred             C-CCCcccccEEEecCceeee
Q 044485          227 D-ESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       227 ~-~~~~~~G~~~~~dgG~~~~  246 (257)
                      + .++|+||+++.+|||+++.
T Consensus       241 ~d~s~~itG~~i~vDGG~~l~  261 (274)
T d1xhla_         241 RNLSSYIIGQSIVADGGSTLV  261 (274)
T ss_dssp             HHHHTTCCSCEEEESTTGGGC
T ss_pred             CccccCccCcEEEeCcCHHHh
Confidence            6 5899999999999999876

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=2.1e-51  Score=337.24  Aligned_cols=234  Identities=24%  Similarity=0.322  Sum_probs=201.1

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+..+  .++..+++|++|++++++++++
T Consensus         3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~   80 (260)
T d1h5qa_           3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG--VKTKAYQCDVSNTDIVTKTIQQ   80 (260)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT--CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC--CceEEEEccCCCHHHHHHHHHH
Confidence            66789999999999999999999999999999999999999988888777644322  3488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh-----------------------cc
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC-----------------------GI  142 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~-----------------------~~  142 (257)
                      +.+++|++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+...+                       ..
T Consensus        81 ~~~~~g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~  158 (260)
T d1h5qa_          81 IDADLGPISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL  158 (260)
T ss_dssp             HHHHSCSEEEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET
T ss_pred             HHHHhCCCcEeccccccccc--CCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc
Confidence            99999999999999998765  789999999999999999999999877664321                       11


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHH
Q 044485          143 IGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL  222 (257)
Q Consensus       143 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  222 (257)
                      .+.+....|+++|+|+.+|+|.|+.|++++|||||+|+||+++|++.....+...+.  .....|.+|+.+|+|+|++++
T Consensus       159 ~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~--~~~~~pl~R~g~pedvA~~v~  236 (260)
T d1h5qa_         159 NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDH--QASNIPLNRFAQPEEMTGQAI  236 (260)
T ss_dssp             TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHH--HHHTCTTSSCBCGGGGHHHHH
T ss_pred             ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHH--HHhcCCCCCCcCHHHHHHHHH
Confidence            122456789999999999999999999999999999999999999876543221111  111567889999999999999


Q ss_pred             HhcCCCCCcccccEEEecCceee
Q 044485          223 YLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       223 ~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ||+|+.++++||++|.+|||+++
T Consensus       237 fL~S~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         237 LLLSDHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HHhcchhCCCcCceEEECCCeec
Confidence            99999999999999999999865

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4e-51  Score=336.22  Aligned_cols=237  Identities=30%  Similarity=0.429  Sum_probs=193.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++...+....++..+.+|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999999999999999877655555689999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--------------hh-hccccCCCCchh
Q 044485           89 QYGKLDIMFNNAGTVDE--VKPNILDNDQAEFERILSINLVGAFLGRNMLL--------------GV-CGIIGGAATHAY  151 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------------s~-~~~~~~~~~~~y  151 (257)
                      ++|+||+||||||...+  ...++.+.+.|+|++.+++|+.+++.+.+.+.              |. .+..+.+....|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~~Y  161 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYY  161 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHH
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCchhh
Confidence            99999999999998643  22357778999999999999999999987773              22 245567778899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccc------cCc-cccccCCCCCHHHHHHHHHHh
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGL------GGM-YSNLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~a~~~~~l  224 (257)
                      ++||+|+.+|+|+|+.|++++|||||+|+||+++|++............      ..+ ...|.+|+.+|+|+|++++||
T Consensus       162 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL  241 (264)
T d1spxa_         162 SIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFL  241 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999998765432211111      011 146788999999999999999


Q ss_pred             cCCC-CCcccccEEEecCceee
Q 044485          225 GSDE-SKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       225 ~s~~-~~~~~G~~~~~dgG~~~  245 (257)
                      +|++ ++|+||+.+.+|||.+|
T Consensus       242 ~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         242 ADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HCHHHHTTCCSCEEEESTTGGG
T ss_pred             hCCcccCCccCceEEeCCChhh
Confidence            9964 88999999999999876

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=1.8e-50  Score=331.48  Aligned_cols=230  Identities=27%  Similarity=0.425  Sum_probs=202.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.++++..+   .++..+.||++|+++++++++++.+
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g---~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG---VEARSYVCDVTSEEAVIGTVDSVVR   78 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999999999999999987654   3489999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~~  153 (257)
                      ++|++|+||||||..... .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+....|++
T Consensus        79 ~~g~iDilVnnaG~~~~~-~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~a  157 (260)
T d1zema1          79 DFGKIDFLFNNAGYQGAF-APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGT  157 (260)
T ss_dssp             HHSCCCEEEECCCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHH
T ss_pred             HhCCCCeehhhhcccccc-CccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHH
Confidence            999999999999976432 57999999999999999999999997766               35667778888899999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh-------------ccccCcc-ccccCCCCCHHHHHH
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD-------------DGLGGMY-SNLKGAVLEPEDAAE  219 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-------------~~~~~~~-~~~~~~~~~~~~~a~  219 (257)
                      ||+|+.+|+|+|+.|++++|||||+|+||+++|++.........             .....+. ..|.+|+.+|+|+|+
T Consensus       158 sKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~  237 (260)
T d1zema1         158 SKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPG  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            99999999999999999999999999999999998754322110             0011111 567889999999999


Q ss_pred             HHHHhcCCCCCcccccEEEecCc
Q 044485          220 AALYLGSDESKCVSGHNLVVDGG  242 (257)
Q Consensus       220 ~~~~l~s~~~~~~~G~~~~~dgG  242 (257)
                      +++||+|+.++++||++|.+|||
T Consensus       238 ~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         238 VVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHhCchhcCccCCeEEeCCC
Confidence            99999999999999999999998

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.5e-50  Score=334.16  Aligned_cols=238  Identities=30%  Similarity=0.387  Sum_probs=204.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+....++..+.+|++|+++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999977655555689999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchh
Q 044485           89 QYGKLDIMFNNAGTVDEV--KPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAY  151 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y  151 (257)
                      ++|+||+||||||...+.  .....+.+.++|++.+++|+.+++.+.+.+.               +..+..+.+....|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y  161 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYY  161 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHH
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchh
Confidence            999999999999987542  1233567888999999999999999977762               23456777888999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh------ccc-cCccccccCCCCCHHHHHHHHHHh
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD------DGL-GGMYSNLKGAVLEPEDAAEAALYL  224 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~a~~~~~l  224 (257)
                      ++||+|+.+|+|+|+.|++++|||||+|+||+++|++.........      +.. ......|.+|+.+|+|+|++++||
T Consensus       162 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL  241 (272)
T d1xkqa_         162 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL  241 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999998765432111      111 111256788999999999999999


Q ss_pred             cCCC-CCcccccEEEecCceeee
Q 044485          225 GSDE-SKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       225 ~s~~-~~~~~G~~~~~dgG~~~~  246 (257)
                      +|++ +.|+||+++.+|||+++.
T Consensus       242 ~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         242 ADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             HCHHHHTTCCSCEEEESTTGGGC
T ss_pred             hCcchhCCccCeEEEeCcCHHHh
Confidence            9976 578999999999999886

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-51  Score=330.22  Aligned_cols=226  Identities=27%  Similarity=0.352  Sum_probs=196.5

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      |.+.|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++..       +..+.+|++|+++++++++ 
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~-------~~~~~~Dv~d~~~v~~~~~-   72 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-------IEPVCVDLGDWEATERALG-   72 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTT-------CEEEECCTTCHHHHHHHHT-
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCC-------CeEEEEeCCCHHHHHHHHH-
Confidence            45578999999999999999999999999999999999999999888887742       7789999999999887764 


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------------hhhccccCCCCc
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------------GVCGIIGGAATH  149 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------------s~~~~~~~~~~~  149 (257)
                         ++|+||+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.                |..+..+.+...
T Consensus        73 ---~~g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~  147 (244)
T d1pr9a_          73 ---SVGPVDLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHS  147 (244)
T ss_dssp             ---TCCCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBH
T ss_pred             ---HhCCceEEEeccccccc--cchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchh
Confidence               56899999999998765  789999999999999999999999877662                455666778888


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      .|++||+|+++|+|+|+.|++++|||||+|+||+++|++.+................|.+|+.+|+|+|+.+.||+|+.+
T Consensus       148 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a  227 (244)
T d1pr9a_         148 VYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRS  227 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             hhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999999999999999999999999976543322211111125678899999999999999999999


Q ss_pred             CcccccEEEecCcee
Q 044485          230 KCVSGHNLVVDGGFA  244 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~  244 (257)
                      +++||+++.+|||++
T Consensus       228 ~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         228 GMTTGSTLPVEGGFW  242 (244)
T ss_dssp             TTCCSCEEEESTTGG
T ss_pred             CCcCCcEEEECccHh
Confidence            999999999999985

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-50  Score=328.85  Aligned_cols=223  Identities=29%  Similarity=0.360  Sum_probs=194.5

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.       .+..+.+|++|+++++++++    
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~----   70 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-------GIEPVCVDLGDWDATEKALG----   70 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-------TCEEEECCTTCHHHHHHHHT----
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-------CCeEEEEeCCCHHHHHHHHH----
Confidence            7899999999999999999999999999999999999998888887764       27789999999999877664    


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------------HhhhccccCCCCchhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------------LGVCGIIGGAATHAYT  152 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------------~s~~~~~~~~~~~~y~  152 (257)
                      ++|+||+||||||....  .++.+.+.++|++.+++|+.+++++.+.+                +|..+..+.+....|+
T Consensus        71 ~~g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~  148 (242)
T d1cyda_          71 GIGPVDLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYS  148 (242)
T ss_dssp             TCCCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             HcCCCeEEEECCccccc--hhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCcccccc
Confidence            57999999999998765  78999999999999999999999987755                2455666777888999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      ++|+|+.+|+|+|+.|++++|||||+|+||+++|++.+......+.........|.+|+.+|+|+|+++.||+|+.+.++
T Consensus       149 asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~i  228 (242)
T d1cyda_         149 STKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSAST  228 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             chHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence            99999999999999999999999999999999999987654322211111125778999999999999999999999999


Q ss_pred             cccEEEecCcee
Q 044485          233 SGHNLVVDGGFA  244 (257)
Q Consensus       233 ~G~~~~~dgG~~  244 (257)
                      ||++|.+|||++
T Consensus       229 tG~~i~vDGG~~  240 (242)
T d1cyda_         229 SGGGILVDAGYL  240 (242)
T ss_dssp             CSSEEEESTTGG
T ss_pred             CCceEEeCcchh
Confidence            999999999975

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=4.8e-50  Score=328.28  Aligned_cols=234  Identities=23%  Similarity=0.370  Sum_probs=201.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++..+   ..++++.+|++++++++++++++.
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~---~~~~~~~~D~s~~~~~~~~~~~~~   78 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG---LNVEGSVCDLLSRTERDKLMQTVA   78 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CCceEEEeecCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999998887654   337889999999999999999999


Q ss_pred             HHc-CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchh
Q 044485           88 TQY-GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y  151 (257)
                      +.+ +.+|+||||||....  .++.+.+.++|.+++++|+.+++.+.+.+               +|..+..+.+....|
T Consensus        79 ~~~~g~idilinnag~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y  156 (258)
T d1ae1a_          79 HVFDGKLNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLY  156 (258)
T ss_dssp             HHTTSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhCCCcEEEecccccccc--CccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhH
Confidence            998 589999999998766  78999999999999999999999997766               366777888899999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh---ccccCcc-ccccCCCCCHHHHHHHHHHhcCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD---DGLGGMY-SNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      +++|+|+++|+|.+++|++++|||||+|+||+++|++.+.......   +....+. ..|.+|+.+|+|+|+++.||+|+
T Consensus       157 ~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~  236 (258)
T d1ae1a_         157 SASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFP  236 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh
Confidence            9999999999999999999999999999999999999876544321   1122222 57789999999999999999999


Q ss_pred             CCCcccccEEEecCceeee
Q 044485          228 ESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~~  246 (257)
                      .++++||+.|.+|||++..
T Consensus       237 ~s~~itG~~i~vDGG~s~~  255 (258)
T d1ae1a_         237 AASYITGQIIWADGGFTAN  255 (258)
T ss_dssp             GGTTCCSCEEEESTTGGGC
T ss_pred             hhCCCcCcEEEeCCCeecc
Confidence            9999999999999998764

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.6e-50  Score=325.75  Aligned_cols=220  Identities=25%  Similarity=0.430  Sum_probs=186.9

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+.++              ++..+++|++|+++++++++++.
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~--------------~~~~~~~Dv~~~~~v~~~~~~~~   68 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK--------------GLFGVEVDVTDSDAVDRAFTAVE   68 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------------TSEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc--------------CceEEEEecCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999875432              26789999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~  152 (257)
                      +.+|++|+||||||....  .++.+.+.|+|++++++|+.+++.+.+.+               +|..+..+.+....|+
T Consensus        69 ~~~g~iDiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~  146 (237)
T d1uzma1          69 EHQGPVEVLVSNAGLSAD--AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYA  146 (237)
T ss_dssp             HHHSSCSEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHH
T ss_pred             HhcCCceEEEeeeccccc--ccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHH
Confidence            999999999999998765  78999999999999999999999998766               3556667778888999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      +||+|+++|+|+|+.|++++|||||+|+||+++|++.+...+...+..  ....|.+|+.+|+|+|++++||+|+.++++
T Consensus       147 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~--~~~~pl~R~~~pedvA~~v~fL~S~~s~~i  224 (237)
T d1uzma1         147 ASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGA--LQFIPAKRVGTPAEVAGVVSFLASEDASYI  224 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHH--GGGCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHH--HhcCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence            999999999999999999999999999999999999876533222111  115678899999999999999999999999


Q ss_pred             cccEEEecCceee
Q 044485          233 SGHNLVVDGGFAI  245 (257)
Q Consensus       233 ~G~~~~~dgG~~~  245 (257)
                      ||++|.+|||+.|
T Consensus       225 tG~~i~vdGG~~m  237 (237)
T d1uzma1         225 SGAVIPVDGGMGM  237 (237)
T ss_dssp             CSCEEEESTTTTC
T ss_pred             cCCeEEECCCCCC
Confidence            9999999999764

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=7.4e-50  Score=326.26  Aligned_cols=228  Identities=31%  Similarity=0.462  Sum_probs=200.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++..      +..++++|++|+++++++++++.+
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~~   76 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGE------RSMFVRHDVSSEADWTLVMAAVQR   76 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCT------TEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC------CeEEEEeecCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999888842      378899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH--------------HhhhccccCCCCchhhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML--------------LGVCGIIGGAATHAYTSS  154 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~--------------~s~~~~~~~~~~~~y~~s  154 (257)
                      ++|++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+              +|..+..+.+....|++|
T Consensus        77 ~~g~iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~~Y~as  154 (253)
T d1hxha_          77 RLGTLNVLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSAS  154 (253)
T ss_dssp             HHCSCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             HhCCCCeEEecccccCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccccccch
Confidence            99999999999998765  78999999999999999999999987777              356677778888899999


Q ss_pred             HHHHHHHHHHHHHHhccC--CcEEEeecCCCccChhhHhHhhhh--hccccCc-cccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          155 KHGLLGLMKNTAVELGRF--GIRVNCVSPYAVSTPLAKDFLKLA--DDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~--gi~v~~i~pg~v~t~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      |+|+.+|+|+++.|++++  |||||+|+||+++|++.+......  ++..... ...+.+|+.+|+|+|++++||+|+.+
T Consensus       155 Kaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s  234 (253)
T d1hxha_         155 KAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDES  234 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGG
T ss_pred             hHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhh
Confidence            999999999999999874  599999999999999976543321  1111111 13456788899999999999999999


Q ss_pred             CcccccEEEecCcee
Q 044485          230 KCVSGHNLVVDGGFA  244 (257)
Q Consensus       230 ~~~~G~~~~~dgG~~  244 (257)
                      +++||+++.+|||+.
T Consensus       235 ~~itG~~i~VDGG~~  249 (253)
T d1hxha_         235 SVMSGSELHADNSIL  249 (253)
T ss_dssp             TTCCSCEEEESSSCT
T ss_pred             CCCcCcEEEECccHh
Confidence            999999999999975

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=7.6e-50  Score=324.52  Aligned_cols=226  Identities=28%  Similarity=0.484  Sum_probs=198.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEee-CcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIAD-IKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +++|||||++|||+++|++|+++|++|++++ |+++.++++.++++..+   .++.++++|++|+++++++++++.+++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG---GQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT---CEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC---CcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999998875 56667788888876543   3488999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhhhhHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~~sK~  156 (257)
                      ++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+....|++||+
T Consensus        79 ~iDiLVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKa  156 (244)
T d1edoa_          79 TIDVVVNNAGITRD--TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKA  156 (244)
T ss_dssp             CCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCCccccccccccc--cchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHH
Confidence            99999999998765  78999999999999999999999997776               35567778888999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhc-CCCCCccccc
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLG-SDESKCVSGH  235 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~-s~~~~~~~G~  235 (257)
                      |+.+|+|+|+.|++++|||||+|+||+++|++.....+...+..  ....|.+|+.+|+|+|+++.||+ |+.+.++||+
T Consensus       157 al~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~--~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~  234 (244)
T d1edoa_         157 GVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKI--LGTIPLGRTGQPENVAGLVEFLALSPAASYITGQ  234 (244)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHH--HTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSC
T ss_pred             HHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHH--HhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCC
Confidence            99999999999999999999999999999999876533222111  11567789999999999999997 8999999999


Q ss_pred             EEEecCceee
Q 044485          236 NLVVDGGFAI  245 (257)
Q Consensus       236 ~~~~dgG~~~  245 (257)
                      ++.+|||+++
T Consensus       235 ~i~vdGG~si  244 (244)
T d1edoa_         235 AFTIDGGIAI  244 (244)
T ss_dssp             EEEESTTTTC
T ss_pred             eEEeCCCeeC
Confidence            9999999864

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=5.7e-50  Score=324.82  Aligned_cols=226  Identities=31%  Similarity=0.475  Sum_probs=194.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++++|++++++++++++++.+
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dls~~~~i~~~~~~i~~   75 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE------AEAIAVVADVSDPKAVEAVFAEALE   75 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC------SSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC------CceEEEEecCCCHHHHHHHHHHHHH
Confidence            5889999999999999999999999999999999999988877777653      3488999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh------------hhccccCCCCchhhhhHH
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG------------VCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s------------~~~~~~~~~~~~y~~sK~  156 (257)
                      .+|++|+||||||....  .++.+.+.++|++++++|+.+++.+.+.+.+            ..+..+.+....|+++|+
T Consensus        76 ~~g~iDiLinnAg~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~~~~Y~~sK~  153 (241)
T d2a4ka1          76 EFGRLHGVAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKL  153 (241)
T ss_dssp             HHSCCCEEEEGGGGTTT--TC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHHHHHHHCSS
T ss_pred             HhCCccEeccccccccc--cchhhhhccccccccccccccccccccccccccccccceeeccccccccccCccccchhhH
Confidence            99999999999998765  7899999999999999999999999888743            233334455668999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCCccccc
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESKCVSGH  235 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~  235 (257)
                      |+++|+|.|++|++++|||||+|+||+++|++.+...+..   ...+. ..|.+|+..|+|+|++++||+|+.++++||+
T Consensus       154 al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~---~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~  230 (241)
T d2a4ka1         154 GVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWA---WEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQ  230 (241)
T ss_dssp             HHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHH---HHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhH---HHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCc
Confidence            9999999999999999999999999999999876543221   11111 5778899999999999999999999999999


Q ss_pred             EEEecCceee
Q 044485          236 NLVVDGGFAI  245 (257)
Q Consensus       236 ~~~~dgG~~~  245 (257)
                      ++.+|||+++
T Consensus       231 ~i~vDGG~s~  240 (241)
T d2a4ka1         231 ALYVDGGRSI  240 (241)
T ss_dssp             EEEESTTTTT
T ss_pred             eEEeCCCccc
Confidence            9999999875

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.4e-49  Score=323.50  Aligned_cols=239  Identities=19%  Similarity=0.220  Sum_probs=194.2

Q ss_pred             ccccccCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHH
Q 044485            5 LMLRRLQGKVALITGGAR--GIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENA   82 (257)
Q Consensus         5 ~~~~~~~~k~~lItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   82 (257)
                      ||..+|+||++|||||++  |||+++|++|+++|++|++++|+++..++..+......    ....+++|++|+++++++
T Consensus         1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~   76 (256)
T d1ulua_           1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG----GALLFRADVTQDEELDAL   76 (256)
T ss_dssp             CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT----CCEEEECCTTCHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccC----cccccccccCCHHHHHHH
Confidence            467799999999999987  99999999999999999999998765554443333222    267899999999999999


Q ss_pred             HHHHHHHcCCccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-------------HhhhccccCCC
Q 044485           83 VNTAVTQYGKLDIMFNNAGTVDE--VKPNILDNDQAEFERILSINLVGAFLGRNML-------------LGVCGIIGGAA  147 (257)
Q Consensus        83 ~~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-------------~s~~~~~~~~~  147 (257)
                      ++++.+++|+||+||||||....  ...++.+.+.++|++.+++|+.+++.+.+.+             +|..+..+.+.
T Consensus        77 ~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~  156 (256)
T d1ulua_          77 FAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK  156 (256)
T ss_dssp             HHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT
T ss_pred             HHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCC
Confidence            99999999999999999997542  1235778899999999999999999998776             35667777888


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCC
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ...|+++|+|+++|+|+++.|++++|||||+|+||+++|++..................|.+|+.+|+|+|++++||+|+
T Consensus       157 ~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~  236 (256)
T d1ulua_         157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSP  236 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            89999999999999999999999999999999999999998765432221111111256788999999999999999999


Q ss_pred             CCCcccccEEEecCceeeee
Q 044485          228 ESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~~~  247 (257)
                      .++++||++|.+|||+++.+
T Consensus       237 ~s~~itG~~i~VDGG~~~~G  256 (256)
T d1ulua_         237 LASGITGEVVYVDAGYHIMG  256 (256)
T ss_dssp             GGTTCCSCEEEESTTGGGBC
T ss_pred             hhCCccCCeEEECcCEeCcC
Confidence            99999999999999998753

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=8.5e-48  Score=315.52  Aligned_cols=231  Identities=26%  Similarity=0.388  Sum_probs=199.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeC-cchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADI-KDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ..|.||++|||||++|||+++|+.|+++|++|+++++ +++.++++.++++..++   +++.+++|++|+++++++++++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~---~~~~~~~D~~~~~~v~~~~~~~   78 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA---QGVAIQADISKPSEVVALFDKA   78 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC---CEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCC---CceEecCCCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999998765 45567888888876553   4889999999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-------------hhhc-cccCCCCchhh
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-------------GVCG-IIGGAATHAYT  152 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-------------s~~~-~~~~~~~~~y~  152 (257)
                      .+++|+||++|||||....  .++.+.+.++|++.+++|+.+++++.+.+.             +..+ ..+.+....|+
T Consensus        79 ~~~~g~idilinnag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y~  156 (259)
T d1ja9a_          79 VSHFGGLDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYA  156 (259)
T ss_dssp             HHHHSCEEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHH
T ss_pred             HHHcCCCcEEEeccccccc--cccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhHH
Confidence            9999999999999998755  789999999999999999999999988773             2223 34567888999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc---------ccCc--cccccCCCCCHHHHHHHH
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG---------LGGM--YSNLKGAVLEPEDAAEAA  221 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~---------~~~~--~~~~~~~~~~~~~~a~~~  221 (257)
                      ++|+|+.+|+|+|++|++++|||||+|+||+++|++.+.........         ....  ...|.+|+++|+|+|+++
T Consensus       157 asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v  236 (259)
T d1ja9a_         157 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAV  236 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999987654332111         0111  156778999999999999


Q ss_pred             HHhcCCCCCcccccEEEecCce
Q 044485          222 LYLGSDESKCVSGHNLVVDGGF  243 (257)
Q Consensus       222 ~~l~s~~~~~~~G~~~~~dgG~  243 (257)
                      +||+|+.++++||+.+.+|||.
T Consensus       237 ~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         237 SALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHhCchhcCCcCceEEeCCCC
Confidence            9999999999999999999996

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.9e-47  Score=315.62  Aligned_cols=234  Identities=27%  Similarity=0.385  Sum_probs=200.5

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ..+|+||++|||||++|||+++|++|+++|++|++++|+. +.++++.++++..+   .++.++++|++|++++++++++
T Consensus        13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g---~~~~~~~~D~~~~~~v~~~~~~   89 (272)
T d1g0oa_          13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG---SDAACVKANVGVVEDIVRMFEE   89 (272)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhC---CceeeEeCCCCCHHHHHHHHHH
Confidence            3469999999999999999999999999999999998874 56677888777654   3489999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh-------------hhc-cccCCCCchh
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG-------------VCG-IIGGAATHAY  151 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s-------------~~~-~~~~~~~~~y  151 (257)
                      +.+.+|++|++|||+|....  .++.+.+.++|.+.+++|+.+++.+.+.+.+             ..+ ..+.+....|
T Consensus        90 ~~~~~g~idilV~nag~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y  167 (272)
T d1g0oa_          90 AVKIFGKLDIVCSNSGVVSF--GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVY  167 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHH
T ss_pred             HHHHhCCCCccccccccchh--hhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhH
Confidence            99999999999999998765  7899999999999999999999999887742             222 2345556789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcccc-----------CccccccCCCCCHHHHHHH
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG-----------GMYSNLKGAVLEPEDAAEA  220 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~a~~  220 (257)
                      +++|+|+++|+|+++.|++++|||||+|+||+++|++.+...........           .....|.+|+.+|+|+|++
T Consensus       168 ~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~  247 (272)
T d1g0oa_         168 SGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARV  247 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHH
Confidence            99999999999999999999999999999999999998765443221111           0114677899999999999


Q ss_pred             HHHhcCCCCCcccccEEEecCceee
Q 044485          221 ALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       221 ~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ++||+|+.+.++||++|.+|||..|
T Consensus       248 v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         248 VCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHhCchhcCccCceEeECCCCCC
Confidence            9999999999999999999999864

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.5e-48  Score=318.63  Aligned_cols=224  Identities=17%  Similarity=0.209  Sum_probs=192.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      ++|||||++|||+++|++|+++|++|++++|+.+.++++.....         ....+|+++.++++++++++.+++|+|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~---------~~~~~dv~~~~~~~~~~~~~~~~~G~i   72 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE---------TYPQLKPMSEQEPAELIEAVTSAYGQV   72 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH---------HCTTSEECCCCSHHHHHHHHHHHHSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC---------cEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            79999999999999999999999999999999888877655432         234689999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhhhhHHHH
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYTSSKHGL  158 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~~sK~a~  158 (257)
                      |+||||||+.... .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+....|++||+|+
T Consensus        73 DiLVnNAg~~~~~-~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal  151 (252)
T d1zmta1          73 DVLVSNDIFAPEF-QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGA  151 (252)
T ss_dssp             CEEEEECCCCCCC-CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHH
T ss_pred             CEEEECCcCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccH
Confidence            9999999976432 67899999999999999999999997776               3555666777788999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh-----hccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCCcc
Q 044485          159 LGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA-----DDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       159 ~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~~  232 (257)
                      .+|+|+|+.|++++|||||+|+||+++|++........     ++....+. ..|.+|+.+|+|+|++++||+|+.++|+
T Consensus       152 ~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~i  231 (252)
T d1zmta1         152 CTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYL  231 (252)
T ss_dssp             HHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGG
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence            99999999999999999999999999999865432211     11111111 5677899999999999999999999999


Q ss_pred             cccEEEecCceeeee
Q 044485          233 SGHNLVVDGGFAIVN  247 (257)
Q Consensus       233 ~G~~~~~dgG~~~~~  247 (257)
                      ||+++.+|||+++.+
T Consensus       232 TG~~i~vdGG~~~~~  246 (252)
T d1zmta1         232 TGQVFWLAGGFPMIE  246 (252)
T ss_dssp             TTCEEEESTTCCCCC
T ss_pred             cCCeEEECCCceeCC
Confidence            999999999998865

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=1.7e-47  Score=316.22  Aligned_cols=231  Identities=26%  Similarity=0.366  Sum_probs=194.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++...      ++..+.+|++++++++++++++.+
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGD------NVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC------CeeEEecccccHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999988888777642      388999999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCCCC---CCCCCCHHHHHHHHhhhchhhhHHHHHH--------------HhhhccccCCCCchh
Q 044485           89 QYGKLDIMFNNAGTVDEVKP---NILDNDQAEFERILSINLVGAFLGRNML--------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~--------------~s~~~~~~~~~~~~y  151 (257)
                      ++|++|++|||||+......   ...+.+.++|++.+++|+.+++++.+.+              +|..+..+.+....|
T Consensus        76 ~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~~~~Y  155 (276)
T d1bdba_          76 RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLY  155 (276)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSSCHHH
T ss_pred             HhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCCCchH
Confidence            99999999999998653211   3355566789999999999999997777              355677778888999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh-------ccccCcc-ccccCCCCCHHHHHHHHHH
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD-------DGLGGMY-SNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~a~~~~~  223 (257)
                      ++||+|+.+|+|+|+.|++++ ||||+|+||+++|++.........       +...... ..|.+|+.+|+|+|++++|
T Consensus       156 ~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~f  234 (276)
T d1bdba_         156 TAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVF  234 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999975 999999999999997543321100       0011111 4678899999999999999


Q ss_pred             hcCC-CCCcccccEEEecCceeee
Q 044485          224 LGSD-ESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       224 l~s~-~~~~~~G~~~~~dgG~~~~  246 (257)
                      |+|+ .+.++||+.+.+|||+++.
T Consensus       235 L~S~~~a~~itG~~i~VDGG~~~~  258 (276)
T d1bdba_         235 FATRGDAAPATGALLNYDGGLGVR  258 (276)
T ss_dssp             HHCHHHHTTCSSCEEEESSSGGGC
T ss_pred             HcCCcccCCeeCcEEEECcChhhc
Confidence            9995 6899999999999998864

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.2e-47  Score=320.31  Aligned_cols=235  Identities=26%  Similarity=0.343  Sum_probs=199.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++....+  .++.++.+|++++++++.+++.+.
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g--~~~~~~~~D~~~~~~v~~~~~~~~   98 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG--NKVHAIQCDVRDPDMVQNTVSELI   98 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcC--CceEEEEecccChHHHHHHhhhhh
Confidence            489999999999999999999999999999999999999998888887755432  348899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------------HhhhccccCCCCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------------~s~~~~~~~~~~~~y  151 (257)
                      +.++++|+||||||....  .++.+.+.+++++.+.+|..+.+.+....                ++..+..+.+....|
T Consensus        99 ~~~g~iDilvnnAg~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Y  176 (294)
T d1w6ua_          99 KVAGHPNIVINNAAGNFI--SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPS  176 (294)
T ss_dssp             HHTCSCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHH
T ss_pred             hhccccchhhhhhhhccc--cccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchH
Confidence            999999999999998765  67889999999999999999988875544                234456667778899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      +++|+|+.+|+|.++.|++++|||||+|+||+++|++........+....... ..|.+|+.+|+|+|+++.||+|+.+.
T Consensus       177 sasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~  256 (294)
T d1w6ua_         177 ASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYAS  256 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999987665433322222222 56788999999999999999999999


Q ss_pred             cccccEEEecCceeee
Q 044485          231 CVSGHNLVVDGGFAIV  246 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~  246 (257)
                      ++||++|.+|||.++.
T Consensus       257 ~itG~~i~vDGG~~l~  272 (294)
T d1w6ua_         257 WINGAVIKFDGGEEVL  272 (294)
T ss_dssp             TCCSCEEEESTTHHHH
T ss_pred             CCCCcEEEECCChhhe
Confidence            9999999999998765

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-47  Score=311.25  Aligned_cols=228  Identities=28%  Similarity=0.451  Sum_probs=192.5

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+..+. .++.++++|++|+++++++++++.++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEP-QKTLFIQCDVADQQQLRDTFRKVVDH   79 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCG-GGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCC-CcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            36999999999999999999999999999999999999999998888664332 34889999999999999999999999


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH------------------HhhhccccCCCCchh
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML------------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~------------------~s~~~~~~~~~~~~y  151 (257)
                      +|+||+||||||....          ++|++.+++|+.+++.+.+.+                  +|..+..+.+....|
T Consensus        80 ~G~iDilVnnAg~~~~----------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y  149 (254)
T d2gdza1          80 FGRLDILVNNAGVNNE----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVY  149 (254)
T ss_dssp             HSCCCEEEECCCCCCS----------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHH
T ss_pred             cCCcCeeccccccccc----------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccch
Confidence            9999999999997643          348899999999999886665                  345666778888899


Q ss_pred             hhhHHHHHHHHHH--HHHHhccCCcEEEeecCCCccChhhHhHhhhhhcc-----ccCcc-ccccCCCCCHHHHHHHHHH
Q 044485          152 TSSKHGLLGLMKN--TAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG-----LGGMY-SNLKGAVLEPEDAAEAALY  223 (257)
Q Consensus       152 ~~sK~a~~~~~~~--l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~a~~~~~  223 (257)
                      ++||+|+.+|+|+  |+.|++++|||||+|+||+++|++.+.........     ...+. ..|.+|+.+|+|+|++++|
T Consensus       150 ~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f  229 (254)
T d2gdza1         150 CASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLIT  229 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            9999999999997  78899999999999999999999987654322111     11111 3566789999999999999


Q ss_pred             hcCCCCCcccccEEEecCceeeeecce
Q 044485          224 LGSDESKCVSGHNLVVDGGFAIVNAGF  250 (257)
Q Consensus       224 l~s~~~~~~~G~~~~~dgG~~~~~~~~  250 (257)
                      |+|+.  ++||+++.+|||..+.-++|
T Consensus       230 L~s~~--~itG~~i~VdGG~~~~~~~~  254 (254)
T d2gdza1         230 LIEDD--ALNGAIMKITTSKGIHFQDY  254 (254)
T ss_dssp             HHHCT--TCSSCEEEEETTTEEEECCC
T ss_pred             HHcCC--CCCCCEEEECCCCeeecccC
Confidence            99975  49999999999998865543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-46  Score=305.22  Aligned_cols=230  Identities=24%  Similarity=0.341  Sum_probs=193.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++..+.. .++.+++||++++++++++++++.
T Consensus         6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~-~~~~~~~~Dls~~~~v~~~v~~~~   84 (257)
T d1xg5a_           6 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP-GTLIPYRCDLSNEEDILSMFSAIR   84 (257)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-ceEEEEEccCCCHHHHHHHHHHHH
Confidence            4599999999999999999999999999999999999999999999998876533 348899999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------------hhhccc--cCCCC
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------------GVCGII--GGAAT  148 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------------s~~~~~--~~~~~  148 (257)
                      +++|+||+||||||....  .++.+.+.++|++.+++|+.+++++.+.+.                 |..+..  |.+..
T Consensus        85 ~~~g~iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~  162 (257)
T d1xg5a_          85 SQHSGVDICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVT  162 (257)
T ss_dssp             HHHCCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGG
T ss_pred             HhcCCCCEEEecccccCC--CccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCccc
Confidence            999999999999998765  789999999999999999999999876663                 223322  33445


Q ss_pred             chhhhhHHHHHHHHHHHHHHh--ccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcC
Q 044485          149 HAYTSSKHGLLGLMKNTAVEL--GRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGS  226 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~--~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s  226 (257)
                      ..|+++|+|+.+|+|+|+.|+  +++|||||+|+||.++|++.........+.  .....|.+++++|+|+|++++||+|
T Consensus       163 ~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~--~~~~~~~~r~~~pedvA~~v~fL~s  240 (257)
T d1xg5a_         163 HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEK--AAATYEQMKCLKPEDVAEAVIYVLS  240 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHH--HHHHHC---CBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHH--HHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            679999999999999999998  789999999999999999877654322111  1114567889999999999999999


Q ss_pred             CCCCcccccEEEecCc
Q 044485          227 DESKCVSGHNLVVDGG  242 (257)
Q Consensus       227 ~~~~~~~G~~~~~dgG  242 (257)
                      +++++++||++..++|
T Consensus       241 ~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         241 TPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             SCTTEEEEEEEEEETT
T ss_pred             ChhcCeECCEEEEeCC
Confidence            9999999997555554

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.8e-46  Score=303.03  Aligned_cols=214  Identities=24%  Similarity=0.379  Sum_probs=182.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++.       .     ..++.+|+++.      ++++.++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-------~-----~~~~~~Dv~~~------~~~~~~~   63 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-------G-----HRYVVCDLRKD------LDLLFEK   63 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-------C-----SEEEECCTTTC------HHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-------C-----CcEEEcchHHH------HHHHHHH
Confidence            5799999999999999999999999999999999997654432       1     45678999864      4556678


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhhhh
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYTSS  154 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~~s  154 (257)
                      +++||+||||||....  .++.+.+.++|++.+++|+.+++.+.+.++               |..+..+.+....|++|
T Consensus        64 ~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~as  141 (234)
T d1o5ia_          64 VKEVDILVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSA  141 (234)
T ss_dssp             SCCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             hCCCcEEEecccccCC--cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhH
Confidence            8999999999998755  789999999999999999999999977773               44556667778899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          155 KHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       155 K~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      |+|+.+|+|+++.|++++|||||+|+||+++|++.........  .... ...|.+|+.+|+|+|++++||+|+.++++|
T Consensus       142 Kaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~--~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~it  219 (234)
T d1o5ia_         142 RMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEK--KKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLT  219 (234)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHH--HHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHH--HHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCc
Confidence            9999999999999999999999999999999999876543211  1111 156788999999999999999999999999


Q ss_pred             ccEEEecCceee
Q 044485          234 GHNLVVDGGFAI  245 (257)
Q Consensus       234 G~~~~~dgG~~~  245 (257)
                      |+++.+|||++.
T Consensus       220 G~~i~vDGG~s~  231 (234)
T d1o5ia_         220 GQTIVVDGGLSK  231 (234)
T ss_dssp             SCEEEESTTCCC
T ss_pred             CcEEEECccccc
Confidence            999999999864

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-46  Score=305.16  Aligned_cols=224  Identities=31%  Similarity=0.531  Sum_probs=188.9

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.++.        .+....+|+.+.+.++..    .
T Consensus         2 ~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~--------~~~~~~~d~~~~~~~~~~----~   69 (245)
T d2ag5a1           2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP--------GIQTRVLDVTKKKQIDQF----A   69 (245)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGST--------TEEEEECCTTCHHHHHHH----H
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcc--------CCceeeeecccccccccc----c
Confidence            4599999999999999999999999999999999999988776665432        277888999887766554    4


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhcc-ccCCCCchh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGI-IGGAATHAY  151 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~-~~~~~~~~y  151 (257)
                      +.++.+|+||||||....  .++.+.+.++|++.+++|+.+++.+.+.+.               |..+. .+.+....|
T Consensus        70 ~~~~~id~lVn~ag~~~~--~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y  147 (245)
T d2ag5a1          70 NEVERLDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVY  147 (245)
T ss_dssp             HHCSCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHH
T ss_pred             cccccceeEEecccccCC--CChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHH
Confidence            566899999999998765  779999999999999999999999977663               33333 456677899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc---cccCcc-ccccCCCCCHHHHHHHHHHhcCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD---GLGGMY-SNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      +++|+|+++|+|+|+.|++++|||||+|+||+++||+.+........   ...... ..|.+|+.+|+|+|+.+.||+++
T Consensus       148 ~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~  227 (245)
T d2ag5a1         148 STTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASD  227 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh
Confidence            99999999999999999999999999999999999998766543221   111111 57788999999999999999999


Q ss_pred             CCCcccccEEEecCceee
Q 044485          228 ESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~  245 (257)
                      .+.++||+++.+|||++|
T Consensus       228 ~s~~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         228 ESAYVTGNPVIIDGGWSL  245 (245)
T ss_dssp             GGTTCCSCEEEECTTGGG
T ss_pred             hhCCCcCceEEeCCCcCC
Confidence            999999999999999875

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.5e-45  Score=298.32  Aligned_cols=215  Identities=23%  Similarity=0.327  Sum_probs=190.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCe-------EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAK-------VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~-------Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      +++|||||++|||+++|++|+++|++       |++++|+.+.++++.++++..+   .++..+.+|++|++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g---~~~~~~~~Dvt~~~~v~~~~~~   78 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG---ALTDTITADISDMADVRRLTTH   78 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT---CEEEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHH
Confidence            57899999999999999999999997       9999999999999999987654   3488999999999999999999


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~  150 (257)
                      +.+++|++|+||||||....  .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+....
T Consensus        79 ~~~~~g~iDilvnnAg~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~  156 (240)
T d2bd0a1          79 IVERYGHIDCLVNNAGVGRF--GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSI  156 (240)
T ss_dssp             HHHHTSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHcCCcceeecccccccC--CccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChH
Confidence            99999999999999998765  78999999999999999999999998777               35667778888999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      |++||+|+.+|+|+|+.|++++|||||+|+||+++|++......           ....++..|+|+|+.++||++++++
T Consensus       157 Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~-----------~~~~~~~~PedvA~~v~~l~s~~~~  225 (240)
T d2bd0a1         157 YCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD-----------EMQALMMMPEDIAAPVVQAYLQPSR  225 (240)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS-----------TTGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCH-----------hhHhcCCCHHHHHHHHHHHHcCCcc
Confidence            99999999999999999999999999999999999998654321           1224567899999999999999888


Q ss_pred             ccccc-EEEecCce
Q 044485          231 CVSGH-NLVVDGGF  243 (257)
Q Consensus       231 ~~~G~-~~~~dgG~  243 (257)
                      +++|+ .+..+||.
T Consensus       226 ~~~~~~~i~p~~G~  239 (240)
T d2bd0a1         226 TVVEEIILRPTSGD  239 (240)
T ss_dssp             EEEEEEEEEETTCC
T ss_pred             CccCCEEEEecCCC
Confidence            88777 45577774

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.3e-45  Score=305.56  Aligned_cols=219  Identities=25%  Similarity=0.383  Sum_probs=189.9

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc---------hhhHhHHHHhccCCCCCCCceeEecCCCCHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD---------DLGESVCKDIGSSSSSASGCSYVHCDVTKEK   77 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~---------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   77 (257)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+.         +.++++.+++...      ...+.+|++|.+
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~d~~~~~   75 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR------GGKAVANYDSVE   75 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT------TCEEEEECCCGG
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc------ccccccccchHH
Confidence            3579999999999999999999999999999999987653         4456666666543      456789999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------Hhhhcc
Q 044485           78 DIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGI  142 (257)
Q Consensus        78 ~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~  142 (257)
                      +++++++++.+.+|+||+||||||+...  .++.+.+.++|++.+++|+.+++++.+.+               +|..+.
T Consensus        76 ~~~~~v~~~~~~~G~iDiLVnNAGi~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~  153 (302)
T d1gz6a_          76 AGEKLVKTALDTFGRIDVVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI  153 (302)
T ss_dssp             GHHHHHHHHHHHTSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCccCCC--CChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhc
Confidence            9999999999999999999999999865  78999999999999999999999998776               356677


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHH
Q 044485          143 IGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAAL  222 (257)
Q Consensus       143 ~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  222 (257)
                      .+.+....|++||+|+.+|+|+|+.|++++|||||+|+||++.|++......            +..+...|+|+|++++
T Consensus       154 ~~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~------------~~~~~~~PedvA~~v~  221 (302)
T d1gz6a_         154 YGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPE------------DLVEALKPEYVAPLVL  221 (302)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCH------------HHHHHSCGGGTHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcH------------hhHhcCCHHHHHHHHH
Confidence            7888899999999999999999999999999999999999998876543221            1234568999999999


Q ss_pred             HhcCCCCCcccccEEEecCceeee
Q 044485          223 YLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       223 ~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ||+|+.+ ++||+++.+|||+.-.
T Consensus       222 fL~S~~a-~itG~~i~vdGG~~~~  244 (302)
T d1gz6a_         222 WLCHESC-EENGGLFEVGAGWIGK  244 (302)
T ss_dssp             HHTSTTC-CCCSCEEEEETTEEEE
T ss_pred             HHcCCCc-CCCCcEEEeCCCceeE
Confidence            9999865 7999999999998654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-42  Score=283.43  Aligned_cols=235  Identities=21%  Similarity=0.188  Sum_probs=194.2

Q ss_pred             ccCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGAR--GIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .|+||++|||||++  |||+++|+.|+++|++|++++|+++..+...+.....+    ....+.+|+++..++...++++
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~   77 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG----SDIVLQCDVAEDASIDTMFAEL   77 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT----CCCEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcC----CcceeecccchHHHHHHHHHHh
Confidence            47899999999998  89999999999999999999999765555444333222    2678899999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCCC---CCCCCCCHHHHHHHHhhhchhhhHHHHHH-------------HhhhccccCCCCch
Q 044485           87 VTQYGKLDIMFNNAGTVDEVK---PNILDNDQAEFERILSINLVGAFLGRNML-------------LGVCGIIGGAATHA  150 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-------------~s~~~~~~~~~~~~  150 (257)
                      .+.++++|++|||++......   ........+.+...+++|+.+.+.+.+.+             ++..+..+.+....
T Consensus        78 ~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~  157 (258)
T d1qsga_          78 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNV  157 (258)
T ss_dssp             HTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTH
T ss_pred             hhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHH
Confidence            999999999999998864311   12345667889999999999999987765             34556777788899


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCC
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESK  230 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~  230 (257)
                      |++||+|+++|+|++++|++++|||||+|+||+++|++..................|.+|+.+|+|+|+++.||+|+.+.
T Consensus       158 Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~  237 (258)
T d1qsga_         158 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSA  237 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999998765432222111112257788999999999999999999999


Q ss_pred             cccccEEEecCceeeee
Q 044485          231 CVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       231 ~~~G~~~~~dgG~~~~~  247 (257)
                      ++||+++.+|||+++..
T Consensus       238 ~itG~~i~vDGG~~i~g  254 (258)
T d1qsga_         238 GISGEVVHVDGGFSIAA  254 (258)
T ss_dssp             TCCSCEEEESTTGGGBC
T ss_pred             CccCceEEECcCHHHhc
Confidence            99999999999998763

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1.7e-42  Score=282.65  Aligned_cols=226  Identities=19%  Similarity=0.227  Sum_probs=180.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCC-CHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT-KEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~v~~~~~~~~   87 (257)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+..++..+......  ..++.++.+|++ +.++++++++++.
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINP--KVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCT--TSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCC--CCCEEEEEeecCCCHHHHHHHHHHHH
Confidence            7899999999999999999999999999999999988777655544332222  234889999998 6778999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH------------------hhhccccCCCCc
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL------------------GVCGIIGGAATH  149 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~------------------s~~~~~~~~~~~  149 (257)
                      +++|+||+||||||...          +++|++++++|+.+++++.+.++                  |..+..+.+...
T Consensus        80 ~~~g~iDilvnnAG~~~----------~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~  149 (254)
T d1sbya1          80 DQLKTVDILINGAGILD----------DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVP  149 (254)
T ss_dssp             HHHSCCCEEEECCCCCC----------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSH
T ss_pred             HHcCCCCEEEeCCCCCC----------HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCH
Confidence            99999999999999643          36689999999999999977663                  556667788888


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccc-cCCCCCHHHHHHHHHHhcCCC
Q 044485          150 AYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       150 ~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      .|++||+|+.+|+|+|+.|++++|||||+|+||+++|++.+...... .....+...+ ..+..+||++|+.++++.+..
T Consensus       150 ~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~~  228 (254)
T d1sbya1         150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWL-DVEPRVAELLLSHPTQTSEQCGQNFVKAIEAN  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGG-GSCTTHHHHHTTSCCEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccch-hHHHHHHhccccCCCCCHHHHHHHHHHhhhCC
Confidence            99999999999999999999999999999999999999876542211 1111111222 234568999999998877543


Q ss_pred             CCcccccEEEecCceeeeeccee
Q 044485          229 SKCVSGHNLVVDGGFAIVNAGFS  251 (257)
Q Consensus       229 ~~~~~G~~~~~dgG~~~~~~~~~  251 (257)
                         .+|+++.+|||. +..-.|.
T Consensus       229 ---~tG~vi~vdgG~-l~~~~~~  247 (254)
T d1sbya1         229 ---KNGAIWKLDLGT-LEAIEWT  247 (254)
T ss_dssp             ---CTTCEEEEETTE-EEECCCC
T ss_pred             ---CCCCEEEECCCE-eCccCCc
Confidence               599999999997 4433333

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.3e-42  Score=289.96  Aligned_cols=248  Identities=19%  Similarity=0.191  Sum_probs=189.3

Q ss_pred             ccccccCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccC--------CCCCCCc-eeEecC-
Q 044485            5 LMLRRLQGKVALITGGAR--GIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSS--------SSSASGC-SYVHCD-   72 (257)
Q Consensus         5 ~~~~~~~~k~~lItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--------~~~~~~v-~~~~~D-   72 (257)
                      .|.++|+||++|||||++  |||+++|++|+++|++|++++|+..............        ....... ....+| 
T Consensus         1 ~~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (297)
T d1d7oa_           1 GLPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDA   80 (297)
T ss_dssp             CCCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECT
T ss_pred             CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            377899999999999876  9999999999999999999999764332222111100        0000000 112222 


Q ss_pred             -------------------CCCHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHH
Q 044485           73 -------------------VTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGR  133 (257)
Q Consensus        73 -------------------~~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  133 (257)
                                         .++..+++++++++.+++|+||+||||||.......++.+.+.++|++.+++|+.+++.+.
T Consensus        81 ~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~  160 (297)
T d1d7oa_          81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             hccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhh
Confidence                               3566677899999999999999999999986544467899999999999999999999998


Q ss_pred             HHHHhh-------------h-ccccCCCCchhhhhHHHHHHHHHHHHHHhc-cCCcEEEeecCCCccChhhHhHhhhhhc
Q 044485          134 NMLLGV-------------C-GIIGGAATHAYTSSKHGLLGLMKNTAVELG-RFGIRVNCVSPYAVSTPLAKDFLKLADD  198 (257)
Q Consensus       134 ~~~~s~-------------~-~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~-~~gi~v~~i~pg~v~t~~~~~~~~~~~~  198 (257)
                      +.+...             . .....+....|+++|+++..+++.++.|++ ++|||||+|+||+++|++.+......+.
T Consensus       161 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~  240 (297)
T d1d7oa_         161 SHFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTM  240 (297)
T ss_dssp             HHHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHH
T ss_pred             hHHHHHhhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHH
Confidence            877321             1 112335566899999999999999999996 6899999999999999987643222111


Q ss_pred             cccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeeecceee
Q 044485          199 GLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGFSV  252 (257)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~~~~~~  252 (257)
                      ........|.+|+.+|+|+|++++||+|+.++++|||++.+|||++..+-++..
T Consensus       241 ~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~G~~~~~  294 (297)
T d1d7oa_         241 IEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGVALDS  294 (297)
T ss_dssp             HHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSCTTC
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhcCCCCCC
Confidence            111111567889999999999999999999999999999999999887665543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.2e-42  Score=281.56  Aligned_cols=228  Identities=18%  Similarity=0.206  Sum_probs=190.3

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHH---cCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSK---HGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~---~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      .|+||++|||||++|||+++|++|++   +|++|++++|+++.++++.+++....+ ..++..++||++++++++++++.
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP-DLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT-TSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcC-CceEEEEEccCCCHHHHHHHHHH
Confidence            58899999999999999999999996   799999999999999999998865433 23589999999999999999998


Q ss_pred             HHHH----cCCccEEEeCCCCCCC-CCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------------hhhccc
Q 044485           86 AVTQ----YGKLDIMFNNAGTVDE-VKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------------GVCGII  143 (257)
Q Consensus        86 ~~~~----~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------------s~~~~~  143 (257)
                      +.+.    ++.+|++|||||...+ ...++.+.+.++|++++++|+.+++++.+.+.                 |..+..
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence            8763    3578999999998653 22568899999999999999999999988773                 455667


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhh--ccccCcc-ccccCCCCCHHHHHHH
Q 044485          144 GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLAD--DGLGGMY-SNLKGAVLEPEDAAEA  220 (257)
Q Consensus       144 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~a~~  220 (257)
                      +.+....|++||+|+++|+|+|+.|  .+|||||+|+||+++|+|.+.......  +....+. ..+.+++.+|+|+|+.
T Consensus       162 ~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~  239 (259)
T d1oaaa_         162 PYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQK  239 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            7788889999999999999999999  679999999999999999876543211  1111111 3456788999999999


Q ss_pred             HHHhcCCCCCcccccEEEec
Q 044485          221 ALYLGSDESKCVSGHNLVVD  240 (257)
Q Consensus       221 ~~~l~s~~~~~~~G~~~~~d  240 (257)
                      +++|+++ ..++||++|++.
T Consensus       240 i~~ll~~-~s~~TG~~idv~  258 (259)
T d1oaaa_         240 LLGLLQK-DTFQSGAHVDFY  258 (259)
T ss_dssp             HHHHHHH-CCSCTTEEEETT
T ss_pred             HHHHhhh-ccCCCCCeEEec
Confidence            9999986 568999998763

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=5.8e-42  Score=284.30  Aligned_cols=227  Identities=21%  Similarity=0.273  Sum_probs=172.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc-hhhHhHHHHhccCCCCC---------------CCceeEecCCCCH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKD-DLGESVCKDIGSSSSSA---------------SGCSYVHCDVTKE   76 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~~---------------~~v~~~~~D~~~~   76 (257)
                      .++|||||++|||+++|++|+++|++|++++|+. +..+++.+++....+..               .++..+.+|+++.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            4899999999999999999999999999987654 55666666665432211               1234456779999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHH--------------HHHhhhchhhhHHHHHHH-----
Q 044485           77 KDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFE--------------RILSINLVGAFLGRNMLL-----  137 (257)
Q Consensus        77 ~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~-----  137 (257)
                      ++++++++++.+++|+||+||||||...+  .++.+.+.++|+              ..+.+|+.+++++.+...     
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  160 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  160 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCC--CchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhh
Confidence            99999999999999999999999998765  566666655544              478999999999876542     


Q ss_pred             ----------------hhhccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhcccc
Q 044485          138 ----------------GVCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLG  201 (257)
Q Consensus       138 ----------------s~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~  201 (257)
                                      +.....+.++...|+++|+|+.+|+|+|+.|++++|||||+|+||++.+......     ....
T Consensus       161 ~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~-----~~~~  235 (284)
T d1e7wa_         161 TPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPP-----AVWE  235 (284)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCH-----HHHH
T ss_pred             hHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCCH-----HHHH
Confidence                            2233445566789999999999999999999999999999999998665432111     0011


Q ss_pred             Ccc-ccc-cCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          202 GMY-SNL-KGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       202 ~~~-~~~-~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ... ..| .+|+.+|+|+|++++||+|+.++++||+++.+|||++++
T Consensus       236 ~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         236 GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             HHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            111 334 378999999999999999999999999999999999875

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=3.8e-41  Score=278.05  Aligned_cols=235  Identities=22%  Similarity=0.232  Sum_probs=184.2

Q ss_pred             ccCCcEEEEecCCC--chHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGAR--GIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~lItGas~--giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++ +++..+++....+   ...++.+|+++.++++++++++
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~---~~~~~~~d~~~~~~~~~~~~~~   77 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN---SPYVYELDVSKEEHFKSLYNSV   77 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCC---ceeEeeecccchhhHHHHHHHH
Confidence            37899999999875  9999999999999999999999864 3444444443332   2678899999999999999999


Q ss_pred             HHHcCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHhhhchhhhHHHHHH-------------HhhhccccCCCCchh
Q 044485           87 VTQYGKLDIMFNNAGTVDEV--KPNILDNDQAEFERILSINLVGAFLGRNML-------------LGVCGIIGGAATHAY  151 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-------------~s~~~~~~~~~~~~y  151 (257)
                      .+.+|++|++|||+|.....  ........++.+...+.++..+........             ++.....+.+....|
T Consensus        78 ~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y  157 (274)
T d2pd4a1          78 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVM  157 (274)
T ss_dssp             HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHH
T ss_pred             HHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhh
Confidence            99999999999999986541  123334455566666666666555554444             123334455666789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      +++|+|+.+|+|+++.|++++|||||+|+||+++|++..................|.+|+.+|+|+|+++.||+|+.+.+
T Consensus       158 ~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~  237 (274)
T d2pd4a1         158 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSG  237 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             hHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCC
Confidence            99999999999999999999999999999999999987654332222222222567789999999999999999999999


Q ss_pred             ccccEEEecCceeeee
Q 044485          232 VSGHNLVVDGGFAIVN  247 (257)
Q Consensus       232 ~~G~~~~~dgG~~~~~  247 (257)
                      +||++|.+|||+++.+
T Consensus       238 itG~~i~vDGG~~~~g  253 (274)
T d2pd4a1         238 VSGEVHFVDAGYHVMG  253 (274)
T ss_dssp             CCSCEEEESTTGGGBS
T ss_pred             CcCceEEECCChhhcc
Confidence            9999999999998764

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-40  Score=270.15  Aligned_cols=220  Identities=28%  Similarity=0.448  Sum_probs=184.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++..      ......+|+.+.+.++...+++..
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~~   75 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN------NCVFAPADVTSEKDVQTALALAKG   75 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCT------TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC------Cccccccccccccccccccccccc
Confidence            68999999999999999999999999999999999999999998888853      378899999999999999999999


Q ss_pred             HcCCccEEEeCCCCCCCC----CCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------------hhhccc
Q 044485           89 QYGKLDIMFNNAGTVDEV----KPNILDNDQAEFERILSINLVGAFLGRNMLL---------------------GVCGII  143 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------------s~~~~~  143 (257)
                      .++.+|.+++|+++....    ..++.+.+.++|++.+++|+.+++++.+.+.                     |..+..
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~  155 (248)
T d2o23a1          76 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE  155 (248)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             ccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc
Confidence            999999999998765432    1356778899999999999999999877762                     445666


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-cccc-CCCCCHHHHHHHH
Q 044485          144 GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNLK-GAVLEPEDAAEAA  221 (257)
Q Consensus       144 ~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~a~~~  221 (257)
                      +.+....|++||+|+++|+|+|+.|++++|||||+|+||+++|++.....+...   .... ..|. +|+.+|+|+|+++
T Consensus       156 ~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~---~~~~~~~pl~~R~g~peevA~~v  232 (248)
T d2o23a1         156 GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVC---NFLASQVPFPSRLGDPAEYAHLV  232 (248)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHTCSSSCSCBCHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHH---HHHHhcCCCCCCCcCHHHHHHHH
Confidence            778888999999999999999999999999999999999999998765433211   1111 3443 7899999999999


Q ss_pred             HHhcCCCCCcccccEEEe
Q 044485          222 LYLGSDESKCVSGHNLVV  239 (257)
Q Consensus       222 ~~l~s~~~~~~~G~~~~~  239 (257)
                      +||++  ++|+|||+|.+
T Consensus       233 ~fL~s--~~~itGq~I~v  248 (248)
T d2o23a1         233 QAIIE--NPFLNGEVIRL  248 (248)
T ss_dssp             HHHHH--CTTCCSCEEEE
T ss_pred             HHHHh--CCCCCceEeEC
Confidence            99997  57899999875

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-41  Score=273.49  Aligned_cols=204  Identities=25%  Similarity=0.395  Sum_probs=178.1

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+   .+++.+.||++|+++++.+++++.
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~---~~~~~~~~Dvs~~~~v~~~~~~i~   79 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG---AKVHTFVVDCSNREDIYSSAKKVK   79 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999987654   348999999999999999999999


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccccCCCCchhh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGIIGGAATHAYT  152 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~~~~~~~~y~  152 (257)
                      +.+|++|++|||||....  ..+.+.+.+.|++++++|+.+++++.+.++               |..+..+.+.+..|+
T Consensus        80 ~~~g~idilinnag~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~  157 (244)
T d1yb1a_          80 AEIGDVSILVNNAGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYC  157 (244)
T ss_dssp             HHTCCCSEEEECCCCCCC--CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHH
T ss_pred             HHcCCCceeEeecccccc--ccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHH
Confidence            999999999999998866  678889999999999999999999988774               445556666677899


Q ss_pred             hhHHHHHHHHHHHHHHhcc---CCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC
Q 044485          153 SSKHGLLGLMKNTAVELGR---FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~---~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  228 (257)
                      +||+|+.+|+++|+.|+++   +||+||+|+||+++|++.+....            +..+..+|+++|+.+......+
T Consensus       158 asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~------------~~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         158 SSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST------------SLGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH------------HHCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCc------------cccCCCCHHHHHHHHHHHHhcC
Confidence            9999999999999999876   68999999999999998754321            1234678999999988766443

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.9e-41  Score=284.10  Aligned_cols=237  Identities=19%  Similarity=0.220  Sum_probs=181.2

Q ss_pred             CCcEEEEec--CCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCC--------C-CCCcee-----------
Q 044485           11 QGKVALITG--GARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSS--------S-ASGCSY-----------   68 (257)
Q Consensus        11 ~~k~~lItG--as~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~--------~-~~~v~~-----------   68 (257)
                      ++|++||||  +++|||+++|+.|+++|++|+++++.................        . ......           
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  668999999999999999999999876544333222111000        0 000111           


Q ss_pred             ---------EecCCCCHHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH--
Q 044485           69 ---------VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL--  137 (257)
Q Consensus        69 ---------~~~D~~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--  137 (257)
                               ..+|+++.++++++++++.+.+|+||+||||+|.......++.+.+.++|.+.+++|+.+++.+.+.+.  
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                     235778899999999999999999999999999876544678899999999999999999999888774  


Q ss_pred             -----------hhhccccCCC-CchhhhhHHHHHHHHHHHHHHhcc-CCcEEEeecCCCccChhhHhHhh----------
Q 044485          138 -----------GVCGIIGGAA-THAYTSSKHGLLGLMKNTAVELGR-FGIRVNCVSPYAVSTPLAKDFLK----------  194 (257)
Q Consensus       138 -----------s~~~~~~~~~-~~~y~~sK~a~~~~~~~l~~e~~~-~gi~v~~i~pg~v~t~~~~~~~~----------  194 (257)
                                 +..+..+.+. ...|+++|+|+++|+|.|+.|+++ +|||||+|+||+++|+.......          
T Consensus       161 m~~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~  240 (329)
T d1uh5a_         161 MKPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN  240 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC-----------
T ss_pred             cccccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhhhh
Confidence                       2334444454 457899999999999999999986 69999999999999953221100          


Q ss_pred             --------------------------------hhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecC
Q 044485          195 --------------------------------LADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDG  241 (257)
Q Consensus       195 --------------------------------~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dg  241 (257)
                                                      ..+....... ..|.+|+.+|+|+|.+++||+|+.++++||++|.+||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~i~VDG  320 (329)
T d1uh5a_         241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDN  320 (329)
T ss_dssp             -------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECC
Confidence                                            0000000001 4578999999999999999999999999999999999


Q ss_pred             ceeeee
Q 044485          242 GFAIVN  247 (257)
Q Consensus       242 G~~~~~  247 (257)
                      |+++..
T Consensus       321 G~~~~g  326 (329)
T d1uh5a_         321 GLNIMF  326 (329)
T ss_dssp             TGGGCS
T ss_pred             Cccccc
Confidence            997753

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=1.1e-39  Score=268.47  Aligned_cols=232  Identities=19%  Similarity=0.176  Sum_probs=186.4

Q ss_pred             ccCCcEEEEecC--CCchHHHHHHHHHHcCCeEEEeeCcchhhHh-HHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            9 RLQGKVALITGG--ARGIGECTARLFSKHGAKVLIADIKDDLGES-VCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         9 ~~~~k~~lItGa--s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      .|+||++|||||  ++|||+++|++|+++|++|++++|+.+++.+ +.+++.      .+...++||++++++++.+++.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~------~~~~~~~~dv~~~~~~~~~~~~   76 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP------AKAPLLELDVQNEEHLASLAGR   76 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSS------SCCCEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcC------CceeeEeeecccccccccccch
Confidence            478999999995  5799999999999999999999999876533 333221      2377899999999999999999


Q ss_pred             HHHHc---CCccEEEeCCCCCCC---CCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH------------hhhccccCCC
Q 044485           86 AVTQY---GKLDIMFNNAGTVDE---VKPNILDNDQAEFERILSINLVGAFLGRNMLL------------GVCGIIGGAA  147 (257)
Q Consensus        86 ~~~~~---~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~------------s~~~~~~~~~  147 (257)
                      +.+.+   +++|+++||+|....   ...++.+.+.+++.+.+.+|..+.+...+...            +.....+.+.
T Consensus        77 v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~  156 (268)
T d2h7ma1          77 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPA  156 (268)
T ss_dssp             HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTT
T ss_pred             hhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcc
Confidence            98765   579999999997542   12456788999999999999999988766662            3334455677


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhc--------cccCcc--ccccCC-CCCHHH
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADD--------GLGGMY--SNLKGA-VLEPED  216 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~--------~~~~~~--~~~~~~-~~~~~~  216 (257)
                      ...|+++|+|+.+|+|.++.|++++|||||+|+||+++|++..........        ......  ..|.++ +.+|+|
T Consensus       157 ~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~d  236 (268)
T d2h7ma1         157 YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP  236 (268)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHH
T ss_pred             cchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHH
Confidence            789999999999999999999999999999999999999987654432111        000111  344444 889999


Q ss_pred             HHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          217 AAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       217 ~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      +|+.+.||+|+.+.++||++|.+|||.+..
T Consensus       237 va~~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         237 VAKTVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             HHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHHHHhCchhcCccCCEEEECcCcccc
Confidence            999999999999999999999999998643

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=1.1e-39  Score=267.98  Aligned_cols=228  Identities=22%  Similarity=0.292  Sum_probs=175.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh-hHhHHHHhccCCCCCCCceeEecCCC----CHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-GESVCKDIGSSSSSASGCSYVHCDVT----KEKDIENAVNTAV   87 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~----~~~~v~~~~~~~~   87 (257)
                      .++|||||++|||+++|++|+++|++|++++|+.+. .+++.+++....+.  ++..+.+|..    .++.++++++++.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG--SAVLCKGDLSLSSSLLDCCEDIIDCSF   79 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT--CEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCC--ceEEEecccccchhHHHHHHHHHHHHH
Confidence            389999999999999999999999999999998664 46677777654332  2555555443    4677888889999


Q ss_pred             HHcCCccEEEeCCCCCCCCCC---------CCCCCCHHHHHHHHhhhchhhhHHHHHH--------------------Hh
Q 044485           88 TQYGKLDIMFNNAGTVDEVKP---------NILDNDQAEFERILSINLVGAFLGRNML--------------------LG  138 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~--------------------~s  138 (257)
                      +++|++|++|||||+..+...         ...+...+.+...+..|..+.+......                    ++
T Consensus        80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (266)
T d1mxha_          80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  159 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence            999999999999998754211         1223345667777888888877764443                    24


Q ss_pred             hhccccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCC-CCCHHHH
Q 044485          139 VCGIIGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGA-VLEPEDA  217 (257)
Q Consensus       139 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  217 (257)
                      ..+..+.+....|++||+|+++|+|.++.|++++|||||+|+||+++|++....... +...   ...|.++ +.+|+|+
T Consensus       160 ~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~-~~~~---~~~pl~r~~~~peev  235 (266)
T d1mxha_         160 AMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQ-EEYR---RKVPLGQSEASAAQI  235 (266)
T ss_dssp             GGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHH-HHHH---TTCTTTSCCBCHHHH
T ss_pred             ccccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHH-HHHH---hcCCCCCCCCCHHHH
Confidence            445566778889999999999999999999999999999999999999865432111 1111   1334434 5799999


Q ss_pred             HHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          218 AEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       218 a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      |++++||+|+.+.++||++|.+|||++|.
T Consensus       236 a~~v~fL~s~~s~~itG~~i~vDGG~~l~  264 (266)
T d1mxha_         236 ADAIAFLVSKDAGYITGTTLKVDGGLILA  264 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHhCchhCCccCCeEEECccHhhh
Confidence            99999999999999999999999999875

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.9e-38  Score=258.35  Aligned_cols=207  Identities=19%  Similarity=0.165  Sum_probs=163.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +.|+||||||++|||+++|++|+++|+  +|++++|+.+.++++.++.      ..+++++++|++|.++++++++++.+
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~------~~~~~~~~~Dvs~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIK------DSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCC------CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhh------CCceEEEEEecCCHHHHHHHHHHHHH
Confidence            459999999999999999999999996  5899999998887765432      13489999999999999999999998


Q ss_pred             HcC--CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhhcc------------------------
Q 044485           89 QYG--KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGI------------------------  142 (257)
Q Consensus        89 ~~~--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~~~------------------------  142 (257)
                      .++  ++|+||||||+..+. .++.+.+.++|++.+++|+.+++.+.+.+++.+-.                        
T Consensus        76 ~~~~~~idilinnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~  154 (250)
T d1yo6a1          76 IVGSDGLSLLINNAGVLLSY-GTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL  154 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCB-CTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGG
T ss_pred             HhCCCCeEEEEEcCcccCCC-CccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccc
Confidence            876  499999999986542 56788999999999999999999998887543210                        


Q ss_pred             ---------ccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCC
Q 044485          143 ---------IGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLE  213 (257)
Q Consensus       143 ---------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (257)
                               .+..+..+|++||+|+.+|++.|+.|++++||+||+|+||+++|+|....                 ...+
T Consensus       155 ~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~-----------------~~~~  217 (250)
T d1yo6a1         155 GSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-----------------AALT  217 (250)
T ss_dssp             GCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------
T ss_pred             ccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC-----------------CCCC
Confidence                     01122346999999999999999999999999999999999999986532                 1357


Q ss_pred             HHHHHHHHHHhcCCCCCcccccEEEecC
Q 044485          214 PEDAAEAALYLGSDESKCVSGHNLVVDG  241 (257)
Q Consensus       214 ~~~~a~~~~~l~s~~~~~~~G~~~~~dg  241 (257)
                      |++.++.++..+.+.....+|..+..||
T Consensus       218 ~e~~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         218 VEQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             -HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             HHHHHHHHHHHHhcCCCCCCeEEECCCC
Confidence            8999999888887766668999887664

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-38  Score=261.36  Aligned_cols=204  Identities=24%  Similarity=0.306  Sum_probs=173.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc-CCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARGIGECTARLFSKH-GAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +++|||||++|||+++|++|+++ |++|++++|+.+.++++.++++..++   ++.+++||++|.++++++++++.+++|
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL---SPRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC---CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            56799999999999999999986 89999999999999999999876543   488999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh-------------cc----------------
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVC-------------GI----------------  142 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~-------------~~----------------  142 (257)
                      +||+||||||+...  ..+.+.+.++|++.+++|+.+++++.+.+++.+             +.                
T Consensus        81 ~iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~  158 (275)
T d1wmaa1          81 GLDVLVNNAGIAFK--VADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRS  158 (275)
T ss_dssp             SEEEEEECCCCCCC--TTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred             CcEEEEEcCCcCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcc
Confidence            99999999998765  667788899999999999999999988875432             11                


Q ss_pred             -------------------------ccCCCCchhhhhHHHHHHHHHHHHHHhcc----CCcEEEeecCCCccChhhHhHh
Q 044485          143 -------------------------IGGAATHAYTSSKHGLLGLMKNTAVELGR----FGIRVNCVSPYAVSTPLAKDFL  193 (257)
Q Consensus       143 -------------------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~----~gi~v~~i~pg~v~t~~~~~~~  193 (257)
                                               .+..+...|++||+++..|++.+++|+++    .||+||+|+||+++|+|.+.. 
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~-  237 (275)
T d1wmaa1         159 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK-  237 (275)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT-
T ss_pred             cccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc-
Confidence                                     01122346999999999999999999876    599999999999999986532 


Q ss_pred             hhhhccccCccccccCCCCCHHHHHHHHHHhc--CCCCCcccccEEE
Q 044485          194 KLADDGLGGMYSNLKGAVLEPEDAAEAALYLG--SDESKCVSGHNLV  238 (257)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~--s~~~~~~~G~~~~  238 (257)
                                      ...+|+|.|+.+++++  ++....++|+.+.
T Consensus       238 ----------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~  268 (275)
T d1wmaa1         238 ----------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS  268 (275)
T ss_dssp             ----------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             ----------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE
Confidence                            1347999999999986  4556678898775

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-39  Score=266.72  Aligned_cols=222  Identities=21%  Similarity=0.241  Sum_probs=171.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEE---eeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLI---ADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~---~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .|++|||||++|||+++|+.|+++|++|+.   +.|+.+..+++.+..+.......++..+.||++|+++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            488999999999999999999999998544   45555554444444433333345699999999999999999988743


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------HhhhccccCCCCchhhh
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------------LGVCGIIGGAATHAYTS  153 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------~s~~~~~~~~~~~~y~~  153 (257)
                        |.+|+||||+|....  .++.+.+.++|++.+++|+.+++++.+.+               +|..+..+.+....|++
T Consensus        82 --g~idilvnnag~~~~--~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~a  157 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLL--GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA  157 (285)
T ss_dssp             --SCCSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             --cchhhhhhccccccc--ccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHH
Confidence              789999999998765  78899999999999999999999998777               36677788888999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccC---------------ccccccCCCCCHHHHH
Q 044485          154 SKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGG---------------MYSNLKGAVLEPEDAA  218 (257)
Q Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~a  218 (257)
                      ||+|+.+|+++|+.|++++|||||+|+||+++|++.........+..+.               ....+..+..+|+|+|
T Consensus       158 sKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA  237 (285)
T d1jtva_         158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA  237 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHH
Confidence            9999999999999999999999999999999999876543321111000               0022334577999999


Q ss_pred             HHHHHhcCCC---CCcccccEE
Q 044485          219 EAALYLGSDE---SKCVSGHNL  237 (257)
Q Consensus       219 ~~~~~l~s~~---~~~~~G~~~  237 (257)
                      +.++++++.+   .+|++|+.+
T Consensus       238 ~~v~~~~~~~~p~~ry~~g~~~  259 (285)
T d1jtva_         238 EVFLTALRAPKPTLRYFTTERF  259 (285)
T ss_dssp             HHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHhCCCCCeEEecHHHH
Confidence            9999998554   456777643

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.6e-38  Score=255.26  Aligned_cols=215  Identities=28%  Similarity=0.404  Sum_probs=174.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++|||||++|||+++|++|+++|++|++++|+++.               .+...+++|+++......+..+..+...
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~---------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~   65 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG---------------EDLIYVEGDVTREEDVRRAVARAQEEAP   65 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS---------------SSSEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc---------------ccceEeeccccchhhhHHHHHhhhcccc
Confidence            5899999999999999999999999999999998643               1256788999999999999888777654


Q ss_pred             CccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------------------HhhhccccCCCC
Q 044485           92 KLDIMFNNAGTVDE--VKPNILDNDQAEFERILSINLVGAFLGRNML---------------------LGVCGIIGGAAT  148 (257)
Q Consensus        92 ~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------------------~s~~~~~~~~~~  148 (257)
                       .+.++++++....  ........+.+.|++.+++|..+++.+.+.+                     +|..+..+.+..
T Consensus        66 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~  144 (241)
T d1uaya_          66 -LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ  144 (241)
T ss_dssp             -EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC
T ss_pred             -ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCc
Confidence             5566666654332  1234566788999999999999999876555                     345566778888


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccc-cCCCCCHHHHHHHHHHhcCC
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~l~s~  227 (257)
                      ..|+++|+|+.+|+|+|+.|++++|||||+|+||+++|++..............  ..+ .+|+.+|+|+|++++||+| 
T Consensus       145 ~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~--~~~~~~R~g~pedvA~~v~fL~s-  221 (241)
T d1uaya_         145 AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAA--QVPFPPRLGRPEEYAALVLHILE-  221 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHT--TCCSSCSCCCHHHHHHHHHHHHH-
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHh--cCCCCCCCcCHHHHHHHHHHHHh-
Confidence            999999999999999999999999999999999999999987654432221111  223 3789999999999999998 


Q ss_pred             CCCcccccEEEecCceeee
Q 044485          228 ESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~~  246 (257)
                       ++++||++|.+|||++|.
T Consensus       222 -~~~iTG~~i~VDGG~~m~  239 (241)
T d1uaya_         222 -NPMLNGEVVRLDGALRMA  239 (241)
T ss_dssp             -CTTCCSCEEEESTTCCCC
T ss_pred             -CCCCCCCEEEECCcccCC
Confidence             468999999999998763

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=4e-38  Score=256.17  Aligned_cols=209  Identities=20%  Similarity=0.173  Sum_probs=166.4

Q ss_pred             cEEEEecCCCchHHHHHHHHH---HcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH-
Q 044485           13 KVALITGGARGIGECTARLFS---KHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT-   88 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~---~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~-   88 (257)
                      |+||||||++|||+++|++|+   ++|++|++++|+++.++++.+..+..    .++.++.||++|+++++++++++.+ 
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNH----SNIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHC----TTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcC----CcEEEEEEEeccHHHHHHHHhhhHHH
Confidence            899999999999999999996   57999999999999888776544432    2489999999999999999999854 


Q ss_pred             -HcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhh--------------------------hc
Q 044485           89 -QYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGV--------------------------CG  141 (257)
Q Consensus        89 -~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~--------------------------~~  141 (257)
                       .++++|+||||||+.... .++.+.+.++|++.+++|+.+++.+.+.+.+.                          .+
T Consensus        79 ~~~~~iDiLvnNAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g  157 (248)
T d1snya_          79 TKDQGLNVLFNNAGIAPKS-ARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG  157 (248)
T ss_dssp             HGGGCCSEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred             hhcCCcceEEeeccccccC-cccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccc
Confidence             578999999999986542 46788999999999999999999998776432                          22


Q ss_pred             cc---cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHH
Q 044485          142 II---GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAA  218 (257)
Q Consensus       142 ~~---~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  218 (257)
                      ..   +.++...|++||+|+.+|+|+++.|++++||+||+|+||+++|+|.....                 ...+++.+
T Consensus       158 ~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~-----------------~~~~~~~~  220 (248)
T d1snya_         158 SIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA-----------------PLDVPTST  220 (248)
T ss_dssp             CSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTC-----------------SBCHHHHH
T ss_pred             ccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccC-----------------CCCchHHH
Confidence            22   23445689999999999999999999999999999999999999865321                 12333344


Q ss_pred             HHHHHhcCCCCCcccccEEEecCce
Q 044485          219 EAALYLGSDESKCVSGHNLVVDGGF  243 (257)
Q Consensus       219 ~~~~~l~s~~~~~~~G~~~~~dgG~  243 (257)
                      +.++.++.......+|+++..||+.
T Consensus       221 ~~i~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         221 GQIVQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHHhcCccCCCcEEEECCeE
Confidence            4444444333444689999998864

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.7e-38  Score=255.32  Aligned_cols=214  Identities=14%  Similarity=0.110  Sum_probs=176.4

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      +||++|||||++|||+++|++|+++|++|+++++++....             .....+.+|.++.++.+.+.+++.+.+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------------SASVIVKMTDSFTEQADQVTAEVGKLL   67 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------------cccceeecccCcHHHHHHHHHHHHHHh
Confidence            4899999999999999999999999999999988764311             114556788888999998888887765


Q ss_pred             C--CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-------------HhhhccccCCCCchhhhhH
Q 044485           91 G--KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-------------LGVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        91 ~--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-------------~s~~~~~~~~~~~~y~~sK  155 (257)
                      +  ++|+||||||.... ...+.+.+.++|++.+++|+.+++.+.+.+             +|..+..+.+....|++||
T Consensus        68 ~~~~iD~lInnAG~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asK  146 (236)
T d1dhra_          68 GDQKVDAILCVAGGWAG-GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAK  146 (236)
T ss_dssp             TTCCEEEEEECCCCCCC-BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred             CCCCceEEEECCccccc-ccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHH
Confidence            4  69999999996543 255777888999999999999999987776             3566777888899999999


Q ss_pred             HHHHHHHHHHHHHhc--cCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccc
Q 044485          156 HGLLGLMKNTAVELG--RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVS  233 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~--~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  233 (257)
                      +|+++|+|+|+.|++  ++|||||+|+||+++|++.+.....          ....++.+|+++|+.+++|+++...+++
T Consensus       147 aal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~----------~~~~~~~~pe~va~~~~~l~s~~~~~i~  216 (236)
T d1dhra_         147 GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE----------ADFSSWTPLEFLVETFHDWITGNKRPNS  216 (236)
T ss_dssp             HHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT----------SCGGGSEEHHHHHHHHHHHHTTTTCCCT
T ss_pred             HHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc----------chhhcCCCHHHHHHHHHHHhCCCccCCC
Confidence            999999999999998  6899999999999999997764321          1234577899999999999999999999


Q ss_pred             ccEEEe--cCceeeeec
Q 044485          234 GHNLVV--DGGFAIVNA  248 (257)
Q Consensus       234 G~~~~~--dgG~~~~~~  248 (257)
                      |+.+.+  ++|.+-..|
T Consensus       217 G~~i~v~~~~g~t~~~p  233 (236)
T d1dhra_         217 GSLIQVVTTDGKTELTP  233 (236)
T ss_dssp             TCEEEEEEETTEEEEEE
T ss_pred             CCeEEEEEECCEEEEEe
Confidence            997765  455443333

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-37  Score=250.78  Aligned_cols=204  Identities=20%  Similarity=0.220  Sum_probs=176.1

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      |+||++||||||+|||+++|++|+++|++|++++|+.+.++++.+++....+  ..+..+.+|+++.+.+...++.+.+.
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~   89 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--ASAHYIAGTMEDMTFAEQFVAQAGKL   89 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC--SEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhc--ccchhhhhhhhhHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999999887654432  34788999999999999999999999


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH--------------HhhhccccCCCCchhhhhH
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML--------------LGVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~--------------~s~~~~~~~~~~~~y~~sK  155 (257)
                      ++.+|+++||||....  .++.+.+.++|.+++++|+.+++.+.+.+              +|..+..+.+....|++||
T Consensus        90 ~g~~~~li~nag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~Y~asK  167 (269)
T d1xu9a_          90 MGGLDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASK  167 (269)
T ss_dssp             HTSCSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred             hCCccccccccccccc--cccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchHHHHHH
Confidence            9999999999998765  77889999999999999999999987777              3566778888899999999


Q ss_pred             HHHHHHHHHHHHHhcc--CCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCC
Q 044485          156 HGLLGLMKNTAVELGR--FGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~--~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      +|+++|+|+|+.|+++  .||+||+|+||+++|++.+.......          .....+|+++|+.++.....
T Consensus       168 aal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~~----------~~~~~~~e~~a~~i~~~~~~  231 (269)
T d1xu9a_         168 FALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV----------HMQAAPKEECALEIIKGGAL  231 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGGG----------GGGCBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCCc----------cccCCCHHHHHHHHHHHhhc
Confidence            9999999999999975  57999999999999998765432111          12245799999998875543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=5.7e-37  Score=250.49  Aligned_cols=204  Identities=25%  Similarity=0.362  Sum_probs=146.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc-C
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY-G   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~-~   91 (257)
                      |+||||||++|||+++|++|+++|++|++++|+++.                    ..+|+.+.+..+....+..... +
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~--------------------~~~d~~~~~~~~~~~~~~~~~~~~   61 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------------VIADLSTAEGRKQAIADVLAKCSK   61 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS--------------------EECCTTSHHHHHHHHHHHHTTCTT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH--------------------HHHHhcCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999987542                    2368888988888776665544 5


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------------------------------
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------------------------------  136 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------------------------------  136 (257)
                      .+|++|||||+....         +.+.....+|..+...+....                                   
T Consensus        62 ~id~lv~~Ag~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (257)
T d1fjha_          62 GMDGLVLCAGLGPQT---------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALE  132 (257)
T ss_dssp             CCSEEEECCCCCTTC---------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHH
T ss_pred             CCcEEEEcCCCCCcH---------HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhcc
Confidence            799999999975431         224555666666665543222                                   


Q ss_pred             -------HhhhccccC-CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCcc-ccc
Q 044485          137 -------LGVCGIIGG-AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMY-SNL  207 (257)
Q Consensus       137 -------~s~~~~~~~-~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~  207 (257)
                             .+..+..+. +...+|++||+|+++|+|+|+.|++++|||||+|+||+++|++.+.............. ..|
T Consensus       133 ~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~P  212 (257)
T d1fjha_         133 AGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPP  212 (257)
T ss_dssp             HTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCS
T ss_pred             CCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCC
Confidence                   122222222 22346999999999999999999999999999999999999998765443221111111 357


Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceee
Q 044485          208 KGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       208 ~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      .+|+.+|+|+|+++.||+|+.++++||++|.+|||++.
T Consensus       213 lgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~ta  250 (257)
T d1fjha_         213 MGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             TTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCccc
Confidence            89999999999999999999999999999999999864

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.4e-36  Score=242.82  Aligned_cols=210  Identities=14%  Similarity=0.146  Sum_probs=169.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH--
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ--   89 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~--   89 (257)
                      +++||||||++|||+++|++|+++|++|++++|++.....             ....+.+|..+.+......+.+...  
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-------------SNILVDGNKNWTEQEQSILEQTASSLQ   68 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-------------EEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc-------------ccceeccccCchhHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999998753211             1345567888888888777777664  


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-------------HhhhccccCCCCchhhhhHH
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-------------LGVCGIIGGAATHAYTSSKH  156 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-------------~s~~~~~~~~~~~~y~~sK~  156 (257)
                      +++||+||||||..... .++.+.+.+.|+.++++|+.+++.+.+.+             +|..+..+.+....|++||+
T Consensus        69 ~g~iD~linnAG~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  147 (235)
T d1ooea_          69 GSQVDGVFCVAGGWAGG-SASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKA  147 (235)
T ss_dssp             TCCEEEEEECCCCCCCB-CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred             CCCeeEEEECCcccccc-cccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHH
Confidence            58899999999976432 45666677899999999999999988777             35667788888999999999


Q ss_pred             HHHHHHHHHHHHhc--cCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHH-hcCCCCCccc
Q 044485          157 GLLGLMKNTAVELG--RFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALY-LGSDESKCVS  233 (257)
Q Consensus       157 a~~~~~~~l~~e~~--~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-l~s~~~~~~~  233 (257)
                      |+++|+|+|+.|++  +.||++|+|+||+++|++.+.....          ....++.+|+++++.+++ +.++...+++
T Consensus       148 al~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~----------~~~~~~~~~~~va~~~~~~l~~~~~~~~t  217 (235)
T d1ooea_         148 AVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLSFISEHLLKWTTETSSRPSS  217 (235)
T ss_dssp             HHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------CCGGGCBCHHHHHHHHHHHHHCGGGCCCT
T ss_pred             HHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcC----------CccccCCCHHHHHHHHHHHhcCccccCCC
Confidence            99999999999998  4799999999999999998765321          123457799999999875 5566677899


Q ss_pred             ccEEEe---cCceee
Q 044485          234 GHNLVV---DGGFAI  245 (257)
Q Consensus       234 G~~~~~---dgG~~~  245 (257)
                      |+.+.+   ||+..+
T Consensus       218 G~~i~v~~~~g~~~~  232 (235)
T d1ooea_         218 GALLKITTENGTSTI  232 (235)
T ss_dssp             TCEEEEEEETTEEEE
T ss_pred             ceEEEEEeeCCEEEE
Confidence            999998   555443

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=2.5e-30  Score=211.10  Aligned_cols=214  Identities=18%  Similarity=0.201  Sum_probs=162.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchh---hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDL---GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++++|||||++|||+++|++|+++|+ +|++++|+...   .++..+++...+   .++.++.||++|+++++++++++
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g---~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG---ARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhcc---ccccccccccchHHHHHHhhccc
Confidence            357999999999999999999999999 58999997544   445555554433   45899999999999999999988


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------HhhhccccCCCCchhhhhH
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------LGVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------~s~~~~~~~~~~~~y~~sK  155 (257)
                      .+. +++|.||||+|....  .++.+.+.++|...+++|+.+++++.+.+           +|..+..+.++...|+++|
T Consensus        85 ~~~-~~i~~vv~~ag~~~~--~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~~YaAak  161 (259)
T d2fr1a1          85 GDD-VPLSAVFHAAATLDD--GTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGN  161 (259)
T ss_dssp             CTT-SCEEEEEECCCCCCC--CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred             ccc-ccccccccccccccc--cccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccHHHHHHH
Confidence            664 589999999998876  78999999999999999999999987766           5778888999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCccccc
Q 044485          156 HGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGH  235 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~  235 (257)
                      ++++.|++.++    ..|+++++|+||.+.++.......  .+...    ..--..++|+++++.+..++....  ....
T Consensus       162 a~l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~~~~--~~~~~----~~G~~~~~~~~~~~~l~~~l~~~~--~~~~  229 (259)
T d2fr1a1         162 AYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPV--ADRFR----RHGVIEMPPETACRALQNALDRAE--VCPI  229 (259)
T ss_dssp             HHHHHHHHHHH----HTTCCCEEEEECCBC--------------CT----TTTEECBCHHHHHHHHHHHHHTTC--SSCE
T ss_pred             HhHHHHHHHHH----hCCCCEEECCCCcccCCccccchH--HHHHH----hcCCCCCCHHHHHHHHHHHHhCCC--ceEE
Confidence            99998877655    459999999999886553321110  01010    000124689999999998886543  3344


Q ss_pred             EEEecCc
Q 044485          236 NLVVDGG  242 (257)
Q Consensus       236 ~~~~dgG  242 (257)
                      ++.+|..
T Consensus       230 v~~~d~~  236 (259)
T d2fr1a1         230 VIDVRWD  236 (259)
T ss_dssp             ECEECHH
T ss_pred             EEeCcHH
Confidence            5555543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=7.9e-19  Score=148.69  Aligned_cols=213  Identities=14%  Similarity=0.135  Sum_probs=142.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh-----hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-----GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      |+||||||||.||.+++++|.++|++|++++|....     ++....+.   .....++.++++|++|.++++++++.. 
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDP---HTCNPKFHLHYGDLSDTSNLTRILREV-   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC------------------------CCEEECCCCSSCHHHHHHHHHHH-
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhh---hhcCCCeEEEEeecCCHHHHHHHHhcc-
Confidence            899999999999999999999999999999986432     22222211   111235889999999999999998865 


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-------------HhhhccccC---------
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-------------LGVCGIIGG---------  145 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-------------~s~~~~~~~---------  145 (257)
                          .+|+++|+|+.....      .+.++....+++|+.++.++....             .|+....+.         
T Consensus        78 ----~~d~v~h~aa~~~~~------~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~  147 (357)
T d1db3a_          78 ----QPDEVYNLGAMSHVA------VSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET  147 (357)
T ss_dssp             ----CCSEEEECCCCCTTT------TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTT
T ss_pred             ----CCCEEEEeecccccc------hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCC
Confidence                699999999976431      122445778899999999875544             122222221         


Q ss_pred             ---CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH------hHhhhhh---ccccCc-c---ccccC
Q 044485          146 ---AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK------DFLKLAD---DGLGGM-Y---SNLKG  209 (257)
Q Consensus       146 ---~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~------~~~~~~~---~~~~~~-~---~~~~~  209 (257)
                         .+...|+.||.+.+.+++.+++.+   |+.+..+.|+.+.+|...      .......   ...... .   .....
T Consensus       148 ~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r  224 (357)
T d1db3a_         148 TPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLR  224 (357)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEE
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeee
Confidence               124579999999999999988774   789999999887776321      1111100   000101 1   11223


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          210 AVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       210 ~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      .++.++|++++++.++...    .|+.+++..|..++
T Consensus       225 ~~~~v~D~~~a~~~~~~~~----~~~~yni~sg~~~s  257 (357)
T d1db3a_         225 DWGHAKDYVKMQWMMLQQE----QPEDFVIATGVQYS  257 (357)
T ss_dssp             CCEEHHHHHHHHHHTTSSS----SCCCEEECCCCCEE
T ss_pred             cceeechHHHHHHHHHhCC----CCCeEEECCCCcee
Confidence            4788999999999877643    46788888777654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.81  E-value=5e-21  Score=148.44  Aligned_cols=141  Identities=18%  Similarity=0.225  Sum_probs=107.8

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      +..+++||++|||||++|||+++++.|+++|++|++++|+.++++++.+++....    ++....+|++|.+++++++  
T Consensus        17 ~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~--   90 (191)
T d1luaa1          17 AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF----KVNVTAAETADDASRAEAV--   90 (191)
T ss_dssp             TTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH----TCCCEEEECCSHHHHHHHT--
T ss_pred             cCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc----chhhhhhhcccHHHHHHHh--
Confidence            4568999999999999999999999999999999999999999988888775432    2567889999999887765  


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----h------hhccc--c--CCCCch
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----G------VCGII--G--GAATHA  150 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----s------~~~~~--~--~~~~~~  150 (257)
                           +++|+||||||+.      +...+.|+|...+++|+.+.++....+.     .      ..+..  +  ..+...
T Consensus        91 -----~~iDilin~Ag~g------~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~  159 (191)
T d1luaa1          91 -----KGAHFVFTAGAIG------LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLK  159 (191)
T ss_dssp             -----TTCSEEEECCCTT------CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCEEEEETTEEEECHHHHHHHH
T ss_pred             -----cCcCeeeecCccc------cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhccCcEEecceEEEeccCcCcHH
Confidence                 4799999999963      3356889999999999877776532220     0      00000  0  011235


Q ss_pred             hhhhHHHHHHHHH
Q 044485          151 YTSSKHGLLGLMK  163 (257)
Q Consensus       151 y~~sK~a~~~~~~  163 (257)
                      |+.+|+++..+++
T Consensus       160 y~~sk~a~~~l~~  172 (191)
T d1luaa1         160 LKLHRACIAKLFE  172 (191)
T ss_dssp             HHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHh
Confidence            8999999887764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=5.5e-17  Score=136.09  Aligned_cols=215  Identities=15%  Similarity=0.161  Sum_probs=140.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHh---HHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGES---VCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~---~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      +||||||+|.||++++++|+++|++|++++|-......   ..+....     ..+.++++|++|.+.+.++++..    
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dl~d~~~l~~~~~~~----   72 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG-----KHPTFVEGDIRNEALMTEILHDH----   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT-----SCCEEEECCTTCHHHHHHHHHHT----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcC-----CCCEEEEeecCCHHHHHHHHhcc----
Confidence            59999999999999999999999999999764322221   2222221     23889999999999998888753    


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhcccc-------------CCC
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIG-------------GAA  147 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~-------------~~~  147 (257)
                       ++|+|||+|+....      ..+.++....+++|+.++.++.....          |.....+             ..+
T Consensus        73 -~~d~ViHlAa~~~~------~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p  145 (338)
T d1udca_          73 -AIDTVIHFAGLKAV------GESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTP  145 (338)
T ss_dssp             -TCSEEEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCC
T ss_pred             -CCCEEEECCCccch------hhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCC
Confidence             69999999995431      12334556889999999999866551          2222221             122


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh------------H----hhhhhccccCc------c-
Q 044485          148 THAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD------------F----LKLADDGLGGM------Y-  204 (257)
Q Consensus       148 ~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~------------~----~~~~~~~~~~~------~-  204 (257)
                      ...|+.+|.+.+.+.+....++  .++.+..++|+.+.++....            +    ...........      . 
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~  223 (338)
T d1udca_         146 QSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYP  223 (338)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSS
T ss_pred             cchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcc
Confidence            4579999999999998877664  46788888887766542210            1    00000000000      0 


Q ss_pred             ---ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          205 ---SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       205 ---~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                         ....+.++..+|++.++..+.........++.+++.++..++
T Consensus       224 ~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~s  268 (338)
T d1udca_         224 TEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNS  268 (338)
T ss_dssp             STTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEE
T ss_pred             cCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCc
Confidence               111123567889987766654433333567889998887654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=1.7e-16  Score=135.66  Aligned_cols=164  Identities=16%  Similarity=0.053  Sum_probs=116.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc----------------hhhHhHHHHhccCCCCCCCceeEecCCCC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKD----------------DLGESVCKDIGSSSSSASGCSYVHCDVTK   75 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~----------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~   75 (257)
                      ||+||||||+|.||.+++++|+++|++|++++.-.                ....+.........  ..++.++.+|++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~Dl~d   78 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT--GKSIELYVGDICD   78 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH--CCCCEEEESCTTS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc--CCCcEEEEccCCC
Confidence            68999999999999999999999999999986210                01111111111111  1238899999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhccc-
Q 044485           76 EKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGII-  143 (257)
Q Consensus        76 ~~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~~-  143 (257)
                      .+.++++++..     ++|+|+|.|+...   ......+.+.....+++|+.++.++.....           +..... 
T Consensus        79 ~~~l~~~~~~~-----~~d~ViHlAa~~~---~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~  150 (393)
T d1i24a_          79 FEFLAESFKSF-----EPDSVVHFGEQRS---APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYG  150 (393)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCC---HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGC
T ss_pred             HHHHHHHHHhh-----cchheeccccccc---cccccccccccccccccccccccHHHHHHHHhccccceeecccccccc
Confidence            99999998865     6999999998653   223334556677888999999999865442           111111 


Q ss_pred             ------------------------cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChh
Q 044485          144 ------------------------GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPL  188 (257)
Q Consensus       144 ------------------------~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~  188 (257)
                                              +..+...|+.+|.+.+.+++.+.+++   |+++.++.|+.+..+.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         151 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVK  216 (393)
T ss_dssp             CCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSC
T ss_pred             ccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCC
Confidence                                    11223469999999999999887764   7899999988776653

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.70  E-value=1.1e-16  Score=135.57  Aligned_cols=213  Identities=19%  Similarity=0.214  Sum_probs=140.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeE-EEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           14 VALITGGARGIGECTARLFSKHGAKV-LIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~V-i~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +||||||+|.||++++++|+++|+.| +++++..... . .+.+.... ...++.++.+|++|.+.++.+++..     .
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~-~-~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~-----~   73 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG-N-LESLSDIS-ESNRYNFEHADICDSAEITRIFEQY-----Q   73 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC-C-GGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccc-c-HHHHHhhh-hcCCcEEEEccCCCHHHHHHHHHhC-----C
Confidence            68999999999999999999999984 5555432211 1 11122221 1234889999999999999888754     6


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-------------------Hhhhcccc---------
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-------------------LGVCGIIG---------  144 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-------------------~s~~~~~~---------  144 (257)
                      +|+|||+|+....      ..+.++....+++|+.++..+....                   .|+....+         
T Consensus        74 ~d~VihlAa~~~~------~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~  147 (361)
T d1kewa_          74 PDAVMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVE  147 (361)
T ss_dssp             CSEEEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSC
T ss_pred             CCEEEECccccch------hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccc
Confidence            9999999986432      1223445778899999998875443                   12222221         


Q ss_pred             -------------CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh--H-hhhhhccc-c-Cc--c
Q 044485          145 -------------GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD--F-LKLADDGL-G-GM--Y  204 (257)
Q Consensus       145 -------------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~--~-~~~~~~~~-~-~~--~  204 (257)
                                   ..+...|+.||.+.+.+++.....+   |+.+.+++|+.+..|....  . ........ + ..  .
T Consensus       148 ~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~  224 (361)
T d1kewa_         148 NSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIY  224 (361)
T ss_dssp             TTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEE
T ss_pred             cccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEe
Confidence                         1123459999999999999988765   7889999998877764321  0 01000000 0 01  0


Q ss_pred             --ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          205 --SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       205 --~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                        ......++..+|+|++++.++....   .|+.+++.+|...+
T Consensus       225 g~g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~Ni~s~~~~s  265 (361)
T d1kewa_         225 GKGDQIRDWLYVEDHARALHMVVTEGK---AGETYNIGGHNEKK  265 (361)
T ss_dssp             TTSCCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEEE
T ss_pred             CCCCeEEeCEEHHHHHHHHHHHHhcCC---CCCeEEECCCCCcc
Confidence              1122336789999999998886543   47889998876554

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.68  E-value=6.7e-16  Score=129.04  Aligned_cols=201  Identities=14%  Similarity=0.052  Sum_probs=132.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch-----hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDD-----LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-----~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      |++|||||||.||+++++.|.++|++|+.++|..+     .............  ...+.++.+|+++.++++..++.. 
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Di~~~~~~~~~~~~~-   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVN--KALMKLHYADLTDASSLRRWIDVI-   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhcc--ccceEEEEccccCHHHHHHHHhhh-
Confidence            89999999999999999999999999999998543     2222211111111  133788999999999999888754 


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------------hhhccc---------
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------------GVCGII---------  143 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------------s~~~~~---------  143 (257)
                          ++|+|||+|+....      ..+.++....+..|+.+...+...+.               +.....         
T Consensus        79 ----~~D~Vih~Aa~~~~------~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E  148 (339)
T d1n7ha_          79 ----KPDEVYNLAAQSHV------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSE  148 (339)
T ss_dssp             ----CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred             ----ccchhhhccccccc------cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCC
Confidence                79999999996532      12234456777888888887644431               111111         


Q ss_pred             --cCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh------Hhhh----hhccccCcc---cccc
Q 044485          144 --GGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD------FLKL----ADDGLGGMY---SNLK  208 (257)
Q Consensus       144 --~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~------~~~~----~~~~~~~~~---~~~~  208 (257)
                        +..+...|+.+|.+.+.+++...+.+   |+.+..++|+.+..|....      ....    .........   ....
T Consensus       149 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~  225 (339)
T d1n7ha_         149 TTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQAS  225 (339)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCE
T ss_pred             CCCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCcc
Confidence              11234579999999999998888764   7999999998887764211      1100    000001111   1112


Q ss_pred             CCCCCHHHHHHHHHHhcCCCC
Q 044485          209 GAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       209 ~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      ..++..+|+++++..++....
T Consensus       226 rd~~~v~D~a~~~~~~~~~~~  246 (339)
T d1n7ha_         226 RDWGFAGDYVEAMWLMLQQEK  246 (339)
T ss_dssp             EECEEHHHHHHHHHHHHTSSS
T ss_pred             ccceeeehHHHHHHHHHhcCC
Confidence            236789999999998886653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=3.3e-16  Score=122.16  Aligned_cols=186  Identities=15%  Similarity=0.058  Sum_probs=116.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      .|+|+||||||+||++++++|.++|+.|+++.|+.+++....         ...+.++.+|++|.++++++++       
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~gD~~d~~~l~~al~-------   66 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG---------PRPAHVVVGDVLQAADVDKTVA-------   66 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS---------CCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc---------ccccccccccccchhhHHHHhc-------
Confidence            478999999999999999999999999999999987643221         1237889999999998877765       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------HhhhccccCCC-----CchhhhhHH
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGIIGGAA-----THAYTSSKH  156 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~~~~~-----~~~y~~sK~  156 (257)
                      +.|++|+++|...+  ........           .+..++....          +|..+....+.     ...|...|.
T Consensus        67 ~~d~vi~~~g~~~~--~~~~~~~~-----------~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~  133 (205)
T d1hdoa_          67 GQDAVIVLLGTRND--LSPTTVMS-----------EGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI  133 (205)
T ss_dssp             TCSEEEECCCCTTC--CSCCCHHH-----------HHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHH
T ss_pred             CCCEEEEEeccCCc--hhhhhhhH-----------HHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccccccchHHH
Confidence            68999999986533  11111111           1122221111          12222211111     123555555


Q ss_pred             HHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCcccccE
Q 044485          157 GLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKCVSGHN  236 (257)
Q Consensus       157 a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~  236 (257)
                      +.+.+.       ...|++.+.|+||.+.........      ...........+++.+|+|+.++..+.++.  ..|+.
T Consensus       134 ~~e~~l-------~~~~~~~tiirp~~~~~~~~~~~~------~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~--~~g~~  198 (205)
T d1hdoa_         134 RMHKVL-------RESGLKYVAVMPPHIGDQPLTGAY------TVTLDGRGPSRVISKHDLGHFMLRCLTTDE--YDGHS  198 (205)
T ss_dssp             HHHHHH-------HHTCSEEEEECCSEEECCCCCSCC------EEESSSCSSCSEEEHHHHHHHHHHTTSCST--TTTCE
T ss_pred             HHHHHH-------HhcCCceEEEecceecCCCCcccE------EEeeCCCCCCCcCCHHHHHHHHHHHhCCCC--CCCEE
Confidence            555443       346899999999987542111000      000002222346789999999999986643  56887


Q ss_pred             EEecC
Q 044485          237 LVVDG  241 (257)
Q Consensus       237 ~~~dg  241 (257)
                      +.+.+
T Consensus       199 ~~~s~  203 (205)
T d1hdoa_         199 TYPSH  203 (205)
T ss_dssp             EEEEC
T ss_pred             EecCC
Confidence            76643

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.66  E-value=1.2e-15  Score=126.69  Aligned_cols=212  Identities=16%  Similarity=0.111  Sum_probs=141.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhH-hHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGE-SVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      |+||||||+|.||++++++|.++|++|+.++|...... .-.+.+..    ..++.++.+|++|.+++.+.+...     
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~-----   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI----EGDIQYEDGDMADACSVQRAVIKA-----   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC----GGGEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcc----cCCcEEEEccccChHHhhhhhccc-----
Confidence            78999999999999999999999999999998764321 11222211    123889999999999998887764     


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------Hhhhcccc------------CCCC
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------LGVCGIIG------------GAAT  148 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------~s~~~~~~------------~~~~  148 (257)
                      .+++++++++....      ....++....++.|+.++.++....           +|.....+            ..+.
T Consensus        72 ~~~~~~~~a~~~~~------~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~  145 (321)
T d1rpna_          72 QPQEVYNLAAQSFV------GASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPR  145 (321)
T ss_dssp             CCSEEEECCSCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred             cccccccccccccc------cccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCcccc
Confidence            68889998875432      1111234677889999999876544           12222221            1234


Q ss_pred             chhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH------hHhhh-hh--ccccCc--c--ccccCCCCCHH
Q 044485          149 HAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK------DFLKL-AD--DGLGGM--Y--SNLKGAVLEPE  215 (257)
Q Consensus       149 ~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~------~~~~~-~~--~~~~~~--~--~~~~~~~~~~~  215 (257)
                      ..|+.+|.+.+.+++.+..++   ++++..+.|+.+..|...      ..... ..  ......  .  ....+.++..+
T Consensus       146 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~  222 (321)
T d1rpna_         146 SPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAG  222 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHH
T ss_pred             ChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeH
Confidence            579999999999999888774   788888888776665321      11110 00  000111  1  12223478899


Q ss_pred             HHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          216 DAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       216 ~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      |+++++..++....    +..+++.+|...+
T Consensus       223 D~~~~~~~~~~~~~----~~~~ni~~~~~~s  249 (321)
T d1rpna_         223 DYVEAMWLMLQQDK----ADDYVVATGVTTT  249 (321)
T ss_dssp             HHHHHHHHHHHSSS----CCCEEECCSCEEE
T ss_pred             HHHHHHHHHHhcCC----cCCceecccccce
Confidence            99999998876542    3456777776554

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.66  E-value=1.8e-15  Score=127.27  Aligned_cols=203  Identities=15%  Similarity=0.068  Sum_probs=140.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ++||+||||||+|.||.++++.|.++|++|+.++|+.+......+..+..    ..+.++.+|++|++.+.++++..   
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~----~~i~~~~~Dl~d~~~l~~~~~~~---   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVA----DGMQSEIGDIRDQNKLLESIREF---   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTT----TTSEEEECCTTCHHHHHHHHHHH---
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcc----cCCeEEEeeccChHhhhhhhhhc---
Confidence            57899999999999999999999999999999999887665555444322    23889999999999998887754   


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH-----------hhhccc-------------cC
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL-----------GVCGII-------------GG  145 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-----------s~~~~~-------------~~  145 (257)
                        .+|+++|+|+....      ..+.+.....+++|+.++..+.....           +.....             +.
T Consensus        79 --~~~~v~~~aa~~~~------~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  150 (356)
T d1rkxa_          79 --QPEIVFHMAAQPLV------RLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAM  150 (356)
T ss_dssp             --CCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCB
T ss_pred             --hhhhhhhhhccccc------cccccCCccccccccccchhhhhhhhcccccccccccccccccccccccccccccccc
Confidence              69999999986432      22345567788999999988866552           111111             11


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhc------cCCcEEEeecCCCccChhhH-------hHhhhhhccccCcc--ccccCC
Q 044485          146 AATHAYTSSKHGLLGLMKNTAVELG------RFGIRVNCVSPYAVSTPLAK-------DFLKLADDGLGGMY--SNLKGA  210 (257)
Q Consensus       146 ~~~~~y~~sK~a~~~~~~~l~~e~~------~~gi~v~~i~pg~v~t~~~~-------~~~~~~~~~~~~~~--~~~~~~  210 (257)
                      .+...|+.+|.+.+.+++..+.++.      .+++.+..+.|+.+..|...       ..............  ......
T Consensus       151 ~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  230 (356)
T d1rkxa_         151 GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRP  230 (356)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEEC
T ss_pred             CCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeecccccc
Confidence            2244699999999999998888763      35788889998877654321       11111110000000  111234


Q ss_pred             CCCHHHHHHHHHHhcCC
Q 044485          211 VLEPEDAAEAALYLGSD  227 (257)
Q Consensus       211 ~~~~~~~a~~~~~l~s~  227 (257)
                      +...+|++.++..++..
T Consensus       231 ~~~v~D~~~a~~~~~~~  247 (356)
T d1rkxa_         231 WQHVLEPLSGYLLLAQK  247 (356)
T ss_dssp             CEETHHHHHHHHHHHHH
T ss_pred             ccccccccchhhhhhhh
Confidence            56789999998876644

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=7.7e-16  Score=129.03  Aligned_cols=206  Identities=14%  Similarity=0.128  Sum_probs=137.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC-CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           14 VALITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +||||||||.||++++++|+++| +.|+++++..+...+..+        ..++.++.+|+++.+++.+.+.   +   .
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~--------~~~~~~i~~Di~~~~~~~~~~~---~---~   67 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--------HPHFHFVEGDISIHSEWIEYHV---K---K   67 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT--------CTTEEEEECCTTTCSHHHHHHH---H---H
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc--------CCCeEEEECccCChHHHHHHHH---h---C
Confidence            69999999999999999999999 579998886654333321        1248999999998776654332   1   4


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccccC------------------
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGIIGG------------------  145 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~~~------------------  145 (257)
                      +|+|||+|+....      ....++....+++|+.++.++.....         +.....+.                  
T Consensus        68 ~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~  141 (342)
T d2blla1          68 CDVVLPLVAIATP------IEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPV  141 (342)
T ss_dssp             CSEEEECBCCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCT
T ss_pred             CCccccccccccc------cccccCCcccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999997543      11223445778999999999866652         11111111                  


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH-----------hhhhhccc-cCc---c--ccc
Q 044485          146 -AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF-----------LKLADDGL-GGM---Y--SNL  207 (257)
Q Consensus       146 -~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~-----------~~~~~~~~-~~~---~--~~~  207 (257)
                       .+...|+.+|.+.+.+++...+.+   |+.+..+.|..+..+.....           ........ +..   .  ...
T Consensus       142 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~  218 (342)
T d2blla1         142 NKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ  218 (342)
T ss_dssp             TCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCC
T ss_pred             CCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCe
Confidence             112469999999999999988775   78888887766655421111           00000000 000   1  112


Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCc
Q 044485          208 KGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG  242 (257)
Q Consensus       208 ~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG  242 (257)
                      ...++..+|+++++..++........|+.+++.+|
T Consensus       219 ~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         219 KRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             EEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             eeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence            23477899999999999876555567999999544

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.64  E-value=1.5e-15  Score=127.49  Aligned_cols=212  Identities=13%  Similarity=0.047  Sum_probs=134.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      +||+||||||+|.||.+++++|.++|++|+.+.|+....+.+......... ......+..|++|.+++++++.      
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP-GRFETAVVEDMLKQGAYDEVIK------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST-TTEEEEECSCTTSTTTTTTTTT------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhcccc-ccccEEEeccccchhhhhhhcc------
Confidence            589999999999999999999999999999999987666555433221111 1124457789999988777654      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH------------Hhhhcccc-C------------
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML------------LGVCGIIG-G------------  145 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~------------~s~~~~~~-~------------  145 (257)
                       .+|+++|+++....      ..+   ....++.|+.++.++....            +|...... .            
T Consensus        83 -~~~~v~~~a~~~~~------~~~---~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~  152 (342)
T d1y1pa1          83 -GAAGVAHIASVVSF------SNK---YDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKS  152 (342)
T ss_dssp             -TCSEEEECCCCCSC------CSC---HHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTC
T ss_pred             -cchhhhhhcccccc------ccc---ccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccc
Confidence             68999999986432      222   3455677888888876544            12111110 0            


Q ss_pred             ------------------CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH---------hHhh-hhh
Q 044485          146 ------------------AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK---------DFLK-LAD  197 (257)
Q Consensus       146 ------------------~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~---------~~~~-~~~  197 (257)
                                        .+...|+.+|.+.+.+++.+++++. .++++..++|+.+..|...         .+.. ...
T Consensus       153 ~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~  231 (342)
T d1y1pa1         153 WNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFN  231 (342)
T ss_dssp             CCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHT
T ss_pred             cccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccccchHHHHHHHHc
Confidence                              0112599999999999999888764 4678888888766443210         0000 000


Q ss_pred             ccccCc-cccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCc
Q 044485          198 DGLGGM-YSNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG  242 (257)
Q Consensus       198 ~~~~~~-~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG  242 (257)
                      ...... .......++.++|+|++++..+....  ..|+.+...++
T Consensus       232 g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~--~~g~~~~~~~~  275 (342)
T d1y1pa1         232 GEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQ--IERRRVYGTAG  275 (342)
T ss_dssp             TCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTT--CCSCEEEECCE
T ss_pred             CCcCcccCCccceeeeeHHHHHHHHHHhhcCcc--ccceEEEEcCC
Confidence            000000 01222236789999999776654432  46666654443

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=2.2e-15  Score=126.37  Aligned_cols=200  Identities=16%  Similarity=0.084  Sum_probs=130.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh-----hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-----GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      |++|||||+|.||.+++++|.++|++|+.++|....     ++..........  ...+.++.+|++|++.+.++++.. 
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~-   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHI--EGNMKLHYGDLTDSTCLVKIINEV-   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-----------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhc--cCCcEEEEeecCCchhhHHHHhhc-
Confidence            344999999999999999999999999999986532     222222111111  124889999999999999988765 


Q ss_pred             HHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-------------HhhhccccC---------
Q 044485           88 TQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-------------LGVCGIIGG---------  145 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-------------~s~~~~~~~---------  145 (257)
                          .+++++|+++....      ..+.+.....+++|+.++.++...+             .|+....+.         
T Consensus        79 ----~~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~  148 (347)
T d1t2aa_          79 ----KPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET  148 (347)
T ss_dssp             ----CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred             ----ccceeeeeeecccc------chhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCC
Confidence                68899999885431      2233445667899999998885544             122222221         


Q ss_pred             ---CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH------hH----hhhhhccccCc-c--ccccC
Q 044485          146 ---AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK------DF----LKLADDGLGGM-Y--SNLKG  209 (257)
Q Consensus       146 ---~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~------~~----~~~~~~~~~~~-~--~~~~~  209 (257)
                         .+...|+.||.+.|.+++.+.+.+   ++.+..++|+.+..|...      ..    ........... .  .....
T Consensus       149 ~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r  225 (347)
T d1t2aa_         149 TPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR  225 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCccee
Confidence               123479999999999998887764   788888888766665211      11    00000011011 1  12223


Q ss_pred             CCCCHHHHHHHHHHhcCCC
Q 044485          210 AVLEPEDAAEAALYLGSDE  228 (257)
Q Consensus       210 ~~~~~~~~a~~~~~l~s~~  228 (257)
                      .++..+|+++++..++...
T Consensus       226 ~~i~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         226 DWGHAKDYVEAMWLMLQND  244 (347)
T ss_dssp             CCEEHHHHHHHHHHHHHSS
T ss_pred             eeeEecHHHHHHHHHhhcC
Confidence            5788999999999887654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.64  E-value=5.2e-16  Score=130.45  Aligned_cols=209  Identities=13%  Similarity=0.136  Sum_probs=136.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch---hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDD---LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      |+||||||||.||.+++++|.++|++|.++.++..   ........+.     ..++.++.+|+.|.+.+..++.     
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~-----~~~i~~~~~Di~d~~~~~~~~~-----   72 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-----GDRVELVVGDIADAELVDKLAA-----   72 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC-----SSSEEEEECCTTCHHHHHHHHT-----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhh-----cCCeEEEEccCCCHHHHHHHHh-----
Confidence            78999999999999999999999987655554321   1111111111     1248899999999999888764     


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhcccc----------------
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGIIG----------------  144 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~~----------------  144 (257)
                        ..|.++|.|+....      ....++....+++|+.++.++.....         +.....+                
T Consensus        73 --~~~~v~~~a~~~~~------~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~  144 (346)
T d1oc2a_          73 --KADAIVHYAAESHN------DNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPG  144 (346)
T ss_dssp             --TCSEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTT
T ss_pred             --hhhhhhhhhhcccc------cchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcc
Confidence              58889999986542      11223446778899999999865441         1111111                


Q ss_pred             --------CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh------H-hhhhhccccCcc--ccc
Q 044485          145 --------GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD------F-LKLADDGLGGMY--SNL  207 (257)
Q Consensus       145 --------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~------~-~~~~~~~~~~~~--~~~  207 (257)
                              ..+...|+.+|.+.+.+++...+++   |+++.+++|+.+..|....      . ............  ...
T Consensus       145 ~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~  221 (346)
T d1oc2a_         145 EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKN  221 (346)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCC
T ss_pred             cccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCc
Confidence                    1123469999999999999888764   8999999998887753211      1 000111000011  223


Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceee
Q 044485          208 KGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAI  245 (257)
Q Consensus       208 ~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~  245 (257)
                      ...++..+|++++++.+..+..   .|..+++.+|...
T Consensus       222 ~r~~i~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~~  256 (346)
T d1oc2a_         222 VRDWIHTNDHSTGVWAILTKGR---MGETYLIGADGEK  256 (346)
T ss_dssp             EEECEEHHHHHHHHHHHHHHCC---TTCEEEECCSCEE
T ss_pred             cccccchhhHHHHHHHHHhhcc---cCccccccccccc
Confidence            3457889999999988776543   4566666665544

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.4e-15  Score=126.19  Aligned_cols=216  Identities=13%  Similarity=0.113  Sum_probs=140.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeC------cchhhHh---HHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADI------KDDLGES---VCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r------~~~~~~~---~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      |+||||||+|.||.+++++|+++|+.|+.+++      ......+   ..+....     .++.++.+|++|.+++++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dl~d~~~l~~~~   77 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG-----RSVEFEEMDILDQGALQRLF   77 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHT-----CCCEEEECCTTCHHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcC-----CCcEEEEeeccccccccccc
Confidence            78999999999999999999999999999864      1111111   1222221     23889999999999998877


Q ss_pred             HHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhcccc---------
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIG---------  144 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~---------  144 (257)
                      ..     ..+++++|+|+....      ..+.++....+++|+.++.++.....          +.....+         
T Consensus        78 ~~-----~~~~~i~h~Aa~~~~------~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~  146 (346)
T d1ek6a_          78 KK-----YSFMAVIHFAGLKAV------GESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDE  146 (346)
T ss_dssp             HH-----CCEEEEEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             cc-----cccccccccccccCc------HhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccc
Confidence            65     368999999996532      12234456778999999988866552          1111111         


Q ss_pred             ----CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChh----------------hHhHhhhh---hccc-
Q 044485          145 ----GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPL----------------AKDFLKLA---DDGL-  200 (257)
Q Consensus       145 ----~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~----------------~~~~~~~~---~~~~-  200 (257)
                          ......|+.+|.+.+...+.+++.  ..++....+.|+.+.++.                ........   .... 
T Consensus       147 ~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  224 (346)
T d1ek6a_         147 AHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALN  224 (346)
T ss_dssp             TSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEE
T ss_pred             cccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEE
Confidence                112347999999999998877654  346777777776554431                11111100   0000 


Q ss_pred             --cCc---c-ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          201 --GGM---Y-SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       201 --~~~---~-~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                        ...   . ....+.++.++|+|.++..+.........++++++.+|..++
T Consensus       225 i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s  276 (346)
T d1ek6a_         225 VFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYS  276 (346)
T ss_dssp             EECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEE
T ss_pred             EcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCccc
Confidence              000   0 111234688999999988776555555678899998887765

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.3e-16  Score=132.43  Aligned_cols=206  Identities=15%  Similarity=0.108  Sum_probs=130.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |+||||||+|.||++++++|.++|++|++++|......+.......    ..++.....|+.+.     +       +..
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~----~~~~d~~~~~~~~~-----~-------~~~   65 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG----HENFELINHDVVEP-----L-------YIE   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTT----CTTEEEEECCTTSC-----C-------CCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcC----CCceEEEehHHHHH-----H-------HcC
Confidence            7899999999999999999999999999998643222111111111    11244444454322     1       236


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH---------Hhhhcccc-----------------CC
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML---------LGVCGIIG-----------------GA  146 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---------~s~~~~~~-----------------~~  146 (257)
                      +|+|||+|+....  . .   +.++..+.+++|+.++.++....         .|+....+                 ..
T Consensus        66 ~d~VihlAa~~~~--~-~---~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~  139 (312)
T d2b69a1          66 VDQIYHLASPASP--P-N---YMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIG  139 (312)
T ss_dssp             CSEEEECCSCCSH--H-H---HTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSS
T ss_pred             CCEEEECcccCCc--h-h---HHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCC
Confidence            9999999996532  1 0   11234677889999999886654         12222221                 12


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhH-----hhhhhc-cccC---cc--ccccCCCCCHH
Q 044485          147 ATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDF-----LKLADD-GLGG---MY--SNLKGAVLEPE  215 (257)
Q Consensus       147 ~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~-----~~~~~~-~~~~---~~--~~~~~~~~~~~  215 (257)
                      +...|+.+|.+.+.+++..++++   |+.+.+++|+.+..|.....     ...... ..+.   ..  ......++..+
T Consensus       140 p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~  216 (312)
T d2b69a1         140 PRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVS  216 (312)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHH
Confidence            34579999999999999988875   89999999998887643210     000000 0001   01  12223467899


Q ss_pred             HHHHHHHHhcCCCCCcccccEEEecCceeeee
Q 044485          216 DAAEAALYLGSDESKCVSGHNLVVDGGFAIVN  247 (257)
Q Consensus       216 ~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~  247 (257)
                      |++++++.++...    .+..+++.+|..++.
T Consensus       217 D~~~~~~~~~~~~----~~~~~n~~~~~~~~~  244 (312)
T d2b69a1         217 DLVNGLVALMNSN----VSSPVNLGNPEEHTI  244 (312)
T ss_dssp             HHHHHHHHHHTSS----CCSCEEESCCCEEEH
T ss_pred             HHHHHHHHHHhhc----cCCceEecCCcccch
Confidence            9999999887544    345688888776653

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.62  E-value=4.3e-15  Score=125.42  Aligned_cols=210  Identities=16%  Similarity=0.103  Sum_probs=140.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ++++||||||+|.||++++++|.++|+.|+++++......  ...+       ....+..+|+.+.+.+..+++      
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~--~~~~-------~~~~~~~~D~~~~~~~~~~~~------   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM--TEDM-------FCDEFHLVDLRVMENCLKVTE------   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS--CGGG-------TCSEEEECCTTSHHHHHHHHT------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch--hhhc-------ccCcEEEeechhHHHHHHHhh------
Confidence            5788999999999999999999999999999987543210  0111       125678889999887766553      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhcccc----------------
Q 044485           91 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIG----------------  144 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~----------------  144 (257)
                       .+|.+||+|+....  .   ....+.....+..|+.++..+.....          |.....+                
T Consensus        79 -~~d~Vih~a~~~~~--~---~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e  152 (363)
T d2c5aa1          79 -GVDHVFNLAADMGG--M---GFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESD  152 (363)
T ss_dssp             -TCSEEEECCCCCCC--H---HHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGG
T ss_pred             -cCCeEeeccccccc--c---cccccccccccccccchhhHHHHhHHhhCcccccccccccccccccccccccccccccc
Confidence             69999999986543  1   11112346677888888888755541          2221111                


Q ss_pred             ---CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh----------HhhhhhccccCcc----ccc
Q 044485          145 ---GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD----------FLKLADDGLGGMY----SNL  207 (257)
Q Consensus       145 ---~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~----------~~~~~~~~~~~~~----~~~  207 (257)
                         ..+...|+.+|.+.+.+++...+++   |+++..++|+.+..+....          .............    ...
T Consensus       153 ~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  229 (363)
T d2c5aa1         153 AWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQ  229 (363)
T ss_dssp             GSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCC
T ss_pred             CCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCe
Confidence               1224579999999999999888775   8999999998887754210          0000000000000    122


Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCceeeeec
Q 044485          208 KGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIVNA  248 (257)
Q Consensus       208 ~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~~~  248 (257)
                      .+.++..+|+++.+..++...    .|+.+++.+|..++..
T Consensus       230 ~rd~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~s~~  266 (363)
T d2c5aa1         230 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSMN  266 (363)
T ss_dssp             EECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEEHH
T ss_pred             EEEEeehhHHHHHHHHHHhCC----CCCeEEEecCCcccHH
Confidence            345788999999999887543    4677899888776543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.61  E-value=1.8e-15  Score=127.12  Aligned_cols=156  Identities=18%  Similarity=0.233  Sum_probs=108.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh-hHhH--HHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-GESV--CKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~-~~~~--~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      |+||||||+|.||++++++|+++|++|+++++.... .+..  .+....     .++.++.+|++|.++++.+++..   
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~-----~~v~~~~~Dl~d~~~l~~~~~~~---   73 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK-----HHIPFYEVDLCDRKGLEKVFKEY---   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHT-----SCCCEEECCTTCHHHHHHHHHHS---
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcc-----cCCeEEEeecCCHHHHHHHHhcc---
Confidence            799999999999999999999999999998763321 1111  122211     23889999999999999887643   


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------Hhhhcccc---------------
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGIIG---------------  144 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~~---------------  144 (257)
                        ++|+|||+|+....      ....+.......+|+.++.++....          .|+....+               
T Consensus        74 --~~d~VihlAa~~~~------~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~  145 (347)
T d1z45a2          74 --KIDSVIHFAGLKAV------GESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEEC  145 (347)
T ss_dssp             --CCCEEEECCSCCCH------HHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTS
T ss_pred             --CCCEEEEccccccc------cccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCcccccc
Confidence              69999999996532      1123344667789999999885554          12211211               


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCcc
Q 044485          145 -GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVS  185 (257)
Q Consensus       145 -~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~  185 (257)
                       ..+...|+.+|.+.+.+++.+.+.. ..++.+..++|+.+.
T Consensus       146 ~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~  186 (347)
T d1z45a2         146 PLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPI  186 (347)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEE
T ss_pred             CCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceE
Confidence             1224579999999999998887643 346677666655443

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.61  E-value=8.1e-15  Score=122.71  Aligned_cols=218  Identities=16%  Similarity=0.045  Sum_probs=142.9

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch----hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD----LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~----~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      .+-|++|||||+|.||++++++|.++|++|+.++|...    ..+..........  ...+.++.+|+.|......... 
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~d~~~~~~~~~-   90 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQ--WSNFKFIQGDIRNLDDCNNACA-   90 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHH--HTTEEEEECCTTSHHHHHHHHT-
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcc--cCCeeEEeeccccccccccccc-
Confidence            34589999999999999999999999999999986332    2222222111110  1237889999999987665433 


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhcccc-----------
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIG-----------  144 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~-----------  144 (257)
                            .++.++|.++....      ..+.++....+++|+.++..+.....          |+....+           
T Consensus        91 ------~~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~  158 (341)
T d1sb8a_          91 ------GVDYVLHQAALGSV------PRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDT  158 (341)
T ss_dssp             ------TCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTC
T ss_pred             ------cccccccccccccc------cccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCC
Confidence                  68899998875421      22456678899999999999876552          2222222           


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhH------hHh-----hhhhccccCcc--ccccCC
Q 044485          145 -GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAK------DFL-----KLADDGLGGMY--SNLKGA  210 (257)
Q Consensus       145 -~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~------~~~-----~~~~~~~~~~~--~~~~~~  210 (257)
                       ..+...|+.+|.+.+.+++.+.+.+   ++++..++|+.+.++...      ...     ......--...  ....+.
T Consensus       159 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~  235 (341)
T d1sb8a_         159 IGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRD  235 (341)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEEC
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEE
Confidence             2233589999999999999988765   688888888877654311      000     00000000011  122345


Q ss_pred             CCCHHHHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          211 VLEPEDAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       211 ~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ++.++|++.++..++..... ..|+.+++.++..++
T Consensus       236 ~i~v~D~~~a~~~~~~~~~~-~~~~~~~~~~~~~~s  270 (341)
T d1sb8a_         236 FCYIENTVQANLLAATAGLD-ARNQVYNIAVGGRTS  270 (341)
T ss_dssp             CEEHHHHHHHHHHHHTCCGG-GCSEEEEESCSCCEE
T ss_pred             EEEEeccchhhhhhhhcccc-ccceeeeecccccch
Confidence            78899999998877655432 467888887766554

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.60  E-value=7.1e-15  Score=125.04  Aligned_cols=164  Identities=18%  Similarity=0.206  Sum_probs=112.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHH-cCCeEEEeeC---------cchhhHhHHHHhc---c--CCCCCCCceeEecCCCCH
Q 044485           12 GKVALITGGARGIGECTARLFSK-HGAKVLIADI---------KDDLGESVCKDIG---S--SSSSASGCSYVHCDVTKE   76 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~-~g~~Vi~~~r---------~~~~~~~~~~~~~---~--~~~~~~~v~~~~~D~~~~   76 (257)
                      +++||||||+|.||++++++|++ .|++|+++++         ..+..++....+.   .  .......+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            46899999999999999999986 6899999874         1112222222221   1  111123477899999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHh----------hhcc----
Q 044485           77 KDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLG----------VCGI----  142 (257)
Q Consensus        77 ~~v~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s----------~~~~----  142 (257)
                      +.++++++.    ..++|+|+|+|+....      ....+.....+++|+.++..+......          ....    
T Consensus        82 ~~l~~~~~~----~~~~d~ViH~Aa~~~~------~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~  151 (383)
T d1gy8a_          82 DFLNGVFTR----HGPIDAVVHMCAFLAV------GESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNP  151 (383)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSC
T ss_pred             HHhhhhhhc----cceeehhhcccccccc------cccccccccccccccccccccchhhhccCCccccccccccccccc
Confidence            998888764    3578999999996532      122344566788899999988655421          1111    


Q ss_pred             ---------------ccCCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChh
Q 044485          143 ---------------IGGAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPL  188 (257)
Q Consensus       143 ---------------~~~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~  188 (257)
                                     .+..+...|+.+|.+.+.+++.+...+   |+.+.+++|+.+..+.
T Consensus       152 ~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~  209 (383)
T d1gy8a_         152 TMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (383)
T ss_dssp             CC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             ccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccC
Confidence                           111234579999999999999887764   7888888888776543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.59  E-value=1.9e-14  Score=119.74  Aligned_cols=213  Identities=17%  Similarity=0.138  Sum_probs=132.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch-hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDD-LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +||||||+|.||+++++.|.++|++|+++++-.. ...+....+...    .++.++.+|++|.+++.++++..     +
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~----~~~~~i~~Di~~~~~l~~~~~~~-----~   72 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL----GNFEFVHGDIRNKNDVTRLITKY-----M   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT----CCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhcc----CCcEEEEcccCCHHHHHHHHHhc-----C
Confidence            6899999999999999999999999999874221 111222222222    23889999999999999888755     5


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH-----------Hhhhcccc-----------------
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML-----------LGVCGIIG-----------------  144 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-----------~s~~~~~~-----------------  144 (257)
                      +|+|||+|+....      ....++....+++|+.++.++....           +|.....+                 
T Consensus        73 ~d~Vih~aa~~~~------~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          73 PDSCFHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             CSEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             CceEEeecccccc------cccccChHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc
Confidence            9999999986532      1223345788899999999986544           12221111                 


Q ss_pred             -----------CCCCchhhhhHHHHHHHHHHHHHHhccCCc--EEEeecCCCccChhh--------HhHhhhhhccccCc
Q 044485          145 -----------GAATHAYTSSKHGLLGLMKNTAVELGRFGI--RVNCVSPYAVSTPLA--------KDFLKLADDGLGGM  203 (257)
Q Consensus       145 -----------~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi--~v~~i~pg~v~t~~~--------~~~~~~~~~~~~~~  203 (257)
                                 ..+...|+.+|...+.+.....+.+....+  +...+.++.......        ..............
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPF  226 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCE
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCce
Confidence                       112346999999999999888887643221  222233222211111        11111111000011


Q ss_pred             c----ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCc
Q 044485          204 Y----SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG  242 (257)
Q Consensus       204 ~----~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG  242 (257)
                      .    ......++..+|++++++.++... ....|+.+++.+|
T Consensus       227 ~~~g~g~~~r~~~~v~D~~~~~~~~l~~~-~~~~~~~~~i~~~  268 (338)
T d1orra_         227 TISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNAFNIGGT  268 (338)
T ss_dssp             EEESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCEEEESSC
T ss_pred             EEeCCCceeEeeecccchhhHHHHHHhcc-ccccCcccccccc
Confidence            0    112234677999999999877543 2357888888665

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.59  E-value=1.4e-15  Score=126.44  Aligned_cols=210  Identities=17%  Similarity=0.178  Sum_probs=138.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEE------eeCcchhh-HhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLI------ADIKDDLG-ESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~------~~r~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +||||||+|.||++++++|.++|+.|..      .++..... ..-......    ..++.++.+|.++........   
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~---   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDA----DPRLRFVHGDIRDAGLLAREL---   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTT----CTTEEEEECCTTCHHHHHHHT---
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhc----CCCeEEEEeccccchhhhccc---
Confidence            6999999999999999999999986443      32211110 111111111    134889999999998776543   


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhcccc------------
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIG------------  144 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~------------  144 (257)
                          ..+|.++|+|+....      ....+.....+++|+.++..+.....          |.....+            
T Consensus        75 ----~~~d~vi~~a~~~~~------~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~  144 (322)
T d1r6da_          75 ----RGVDAIVHFAAESHV------DRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSP  144 (322)
T ss_dssp             ----TTCCEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSC
T ss_pred             ----cccceEEeecccccc------cccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCC
Confidence                379999999986432      22334456678899999998866652          2222222            


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh--H----hh-hhhccccCcc--ccccCCCCCHH
Q 044485          145 GAATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD--F----LK-LADDGLGGMY--SNLKGAVLEPE  215 (257)
Q Consensus       145 ~~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~--~----~~-~~~~~~~~~~--~~~~~~~~~~~  215 (257)
                      ..+...|+.+|.+.+.+++.+++++   |+.+.+++|+.+..|....  .    .. ......-...  ....+.++..+
T Consensus       145 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~  221 (322)
T d1r6da_         145 LEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTD  221 (322)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHH
Confidence            1223579999999999999998775   7999999998887764321  1    01 0010000011  12223467899


Q ss_pred             HHHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          216 DAAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       216 ~~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      |+|++++.++....   .|+.+++..|...+
T Consensus       222 D~a~ai~~~~~~~~---~~~~~ni~~~~~~s  249 (322)
T d1r6da_         222 DHCRGIALVLAGGR---AGEIYHIGGGLELT  249 (322)
T ss_dssp             HHHHHHHHHHHHCC---TTCEEEECCCCEEE
T ss_pred             HHHHHHHHHHhCCC---CCCeeEEeecccch
Confidence            99999999887654   58899998887665

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.58  E-value=2.8e-15  Score=118.79  Aligned_cols=207  Identities=11%  Similarity=0.016  Sum_probs=122.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCe--EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           13 KVALITGGARGIGECTARLFSKHGAK--VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ++||||||+|.||++++++|+++|+.  |+...|+++..+..    .      .++.++.+|+++.+++.++++      
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~----~------~~~~~~~~d~~~~~~~~~~~~------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI----G------GEADVFIGDITDADSINPAFQ------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT----T------CCTTEEECCTTSHHHHHHHHT------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc----c------CCcEEEEeeeccccccccccc------
Confidence            79999999999999999999999965  66677877543322    1      237889999999998877764      


Q ss_pred             CCccEEEeCCCCCCCCCC-------CCCCCCHHHHHHHHhhhchhhhHHHHHHHhhh-----------ccccCCCCchh-
Q 044485           91 GKLDIMFNNAGTVDEVKP-------NILDNDQAEFERILSINLVGAFLGRNMLLGVC-----------GIIGGAATHAY-  151 (257)
Q Consensus        91 ~~id~lv~~ag~~~~~~~-------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~-----------~~~~~~~~~~y-  151 (257)
                       .+|.+||+++.......       ...............+|+.++..+........           ...+......+ 
T Consensus        68 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~  146 (252)
T d2q46a1          68 -GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLG  146 (252)
T ss_dssp             -TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGG
T ss_pred             -cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCccccccc
Confidence             69999999986542111       01111122334455677777766654432111           11111111111 


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCCCCc
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDESKC  231 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~  231 (257)
                      ...+.........+.   ...|+++..++||.+..+...........  ..........+++++|+|++++.++..+.  
T Consensus       147 ~~~~~~~~~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~--~~~~~~~~~~~i~~~Dva~a~~~~l~~~~--  219 (252)
T d2q46a1         147 NGNILVWKRKAEQYL---ADSGTPYTIIRAGGLLDKEGGVRELLVGK--DDELLQTDTKTVPRADVAEVCIQALLFEE--  219 (252)
T ss_dssp             GCCHHHHHHHHHHHH---HHSSSCEEEEEECEEECSCTTSSCEEEES--TTGGGGSSCCEEEHHHHHHHHHHHTTCGG--
T ss_pred             ccchhhhhhhhhhhh---hcccccceeecceEEECCCcchhhhhhcc--CcccccCCCCeEEHHHHHHHHHHHhCCcc--
Confidence            112222222222222   23689999999998877643211100000  00011112346789999999998886543  


Q ss_pred             ccccEEEecCce
Q 044485          232 VSGHNLVVDGGF  243 (257)
Q Consensus       232 ~~G~~~~~dgG~  243 (257)
                      ..|+++++-++.
T Consensus       220 ~~g~~~~i~~~~  231 (252)
T d2q46a1         220 AKNKAFDLGSKP  231 (252)
T ss_dssp             GTTEEEEEEECC
T ss_pred             ccCcEEEEeeCC
Confidence            578899886643

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=2.7e-14  Score=113.22  Aligned_cols=189  Identities=16%  Similarity=0.112  Sum_probs=120.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      +.+++|+||||||||.||++++++|.++|.  .|++++|++.....-..         ..+....+|+.+.+++...+  
T Consensus        10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~---------~~i~~~~~D~~~~~~~~~~~--   78 (232)
T d2bkaa1          10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY---------KNVNQEVVDFEKLDDYASAF--   78 (232)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG---------GGCEEEECCGGGGGGGGGGG--
T ss_pred             hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccccc---------ceeeeeeecccccccccccc--
Confidence            457789999999999999999999999996  79999998754322111         12566778887776554433  


Q ss_pred             HHHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccCCCCchhhhhH
Q 044485           86 AVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGGAATHAYTSSK  155 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~~~~~~y~~sK  155 (257)
                           .++|+++||+|....         .........+|+.++..+.....          |..+.. ......|..+|
T Consensus        79 -----~~~d~vi~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~-~~~~~~Y~~~K  143 (232)
T d2bkaa1          79 -----QGHDVGFCCLGTTRG---------KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGAD-KSSNFLYLQVK  143 (232)
T ss_dssp             -----SSCSEEEECCCCCHH---------HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCC-TTCSSHHHHHH
T ss_pred             -----ccccccccccccccc---------ccchhhhhhhcccccceeeecccccCccccccCCccccc-cCccchhHHHH
Confidence                 479999999985421         23455667788888888766552          111111 12245699999


Q ss_pred             HHHHHHHHHHHHHhccCCc-EEEeecCCCccChhhHhHhh--hhhccccCcc-ccccCCCCCHHHHHHHHHHhcCCCC
Q 044485          156 HGLLGLMKNTAVELGRFGI-RVNCVSPYAVSTPLAKDFLK--LADDGLGGMY-SNLKGAVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       156 ~a~~~~~~~l~~e~~~~gi-~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~s~~~  229 (257)
                      ...+...+.       .|. ++..++||.+..+.......  ........+. .......++++|+|++++..+....
T Consensus       144 ~~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~  214 (232)
T d2bkaa1         144 GEVEAKVEE-------LKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  214 (232)
T ss_dssp             HHHHHHHHT-------TCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             HHhhhcccc-------ccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCc
Confidence            988865543       344 57889999987764322111  0010111111 1111234678999999887775543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.45  E-value=2.8e-13  Score=111.74  Aligned_cols=141  Identities=15%  Similarity=0.203  Sum_probs=103.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      -|+||||||+|.||++++++|+++|..|+++++..                       .+|+.+.+.+..+++.-     
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-----------------------~~~~~~~~~~~~~~~~~-----   53 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASE-----   53 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-----------------------hccccCHHHHHHHHhhc-----
Confidence            37899999999999999999999999988765432                       15899999988877642     


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHH----------HhhhccccC----------------
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNML----------LGVCGIIGG----------------  145 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----------~s~~~~~~~----------------  145 (257)
                      .+|.++|+|+....     .........+.++.|+.++.++....          .|+...++.                
T Consensus        54 ~~d~v~~~a~~~~~-----~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~  128 (315)
T d1e6ua_          54 RIDQVYLAAAKVGG-----IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTL  128 (315)
T ss_dssp             CCSEEEECCCCCCC-----HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred             CCCEEEEcchhccc-----cccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCC
Confidence            69999999976532     11123334556788999998875554          122222221                


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChh
Q 044485          146 -AATHAYTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPL  188 (257)
Q Consensus       146 -~~~~~y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~  188 (257)
                       +....|+.+|.+.|.+++.+.+++   |+++.+++|+.+..|.
T Consensus       129 ~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~  169 (315)
T d1e6ua_         129 EPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPH  169 (315)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCC
Confidence             112369999999999999998775   8999999998887653

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.44  E-value=3.5e-13  Score=109.16  Aligned_cols=188  Identities=15%  Similarity=0.118  Sum_probs=121.2

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      ++||||||||.||++++++|.++|++|+.++|++                        +|+.|.++++++++..     +
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~------------------------~D~~d~~~~~~~l~~~-----~   52 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD------------------------LDITNVLAVNKFFNEK-----K   52 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT------------------------CCTTCHHHHHHHHHHH-----C
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh------------------------ccCCCHHHHHHHHHHc-----C
Confidence            4699999999999999999999999999998753                        4899999998888754     6


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccc------------cCCCCchh
Q 044485           93 LDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGII------------GGAATHAY  151 (257)
Q Consensus        93 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~------------~~~~~~~y  151 (257)
                      +|+|||+|+....      +.........++.|+.....+.....         +.....            +..+...|
T Consensus        53 ~d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~  126 (281)
T d1vl0a_          53 PNVVINCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAY  126 (281)
T ss_dssp             CSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHH
T ss_pred             CCEEEeecccccc------ccccccchhhcccccccccccccccccccccccccccceeeeccccccccccccccchhhh
Confidence            9999999986532      11223345556667666665543331         111111            11223468


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhh----hccccCccccccCCCCCHHHHHHHHHHhcCC
Q 044485          152 TSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA----DDGLGGMYSNLKGAVLEPEDAAEAALYLGSD  227 (257)
Q Consensus       152 ~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~  227 (257)
                      +.+|.+.+.+.+.       .+.+...+.|+.+..+.........    ..............+...+|+++++.+++..
T Consensus       127 ~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~  199 (281)
T d1vl0a_         127 GKTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDE  199 (281)
T ss_dssp             HHHHHHHHHHHHH-------HCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHH
T ss_pred             hhhhhHHHHHHHH-------hCCCccccceeEEeCCCcccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhh
Confidence            8888887766643       3567778899888665432211111    1111111122334577899999999999865


Q ss_pred             CCCcccccEEEecCceeee
Q 044485          228 ESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       228 ~~~~~~G~~~~~dgG~~~~  246 (257)
                      ..   +| .+++.++..++
T Consensus       200 ~~---~g-~~~~~~~~~~s  214 (281)
T d1vl0a_         200 KN---YG-TFHCTCKGICS  214 (281)
T ss_dssp             TC---CE-EEECCCBSCEE
T ss_pred             cc---cC-ceeEeCCCccc
Confidence            43   45 56666655554

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.30  E-value=2.4e-12  Score=104.70  Aligned_cols=211  Identities=13%  Similarity=0.133  Sum_probs=114.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH--HHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV--CKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~--~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -|+||||||||.||++++++|.++|++|++++|+.......  ...+.....  ..+.++.+|+.+..+....++     
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~-----   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGANIVHGSIDDHASLVEAVK-----   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT--TTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhcc--CCcEEEEeecccchhhhhhhh-----
Confidence            47899999999999999999999999999999976543211  111111111  127889999999988777665     


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHHhhhcc-ccCCCCchhhhhHHHHHHHHHHHHHH
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLLGVCGI-IGGAATHAYTSSKHGLLGLMKNTAVE  168 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~s~~~~-~~~~~~~~y~~sK~a~~~~~~~l~~e  168 (257)
                        ..+.++++++....      .......+.....+....     .+.|..+. ........+...+............ 
T Consensus        76 --~~~~vi~~~~~~~~------~~~~~~~~a~~~~~~~~~-----~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  141 (307)
T d1qyca_          76 --NVDVVISTVGSLQI------ESQVNIIKAIKEVGTVKR-----FFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIE-  141 (307)
T ss_dssp             --TCSEEEECCCGGGS------GGGHHHHHHHHHHCCCSE-----EECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHH-
T ss_pred             --hceeeeeccccccc------chhhHHHHHHHHhccccc-----eeeeccccccccccccccccccccccccccchhh-
Confidence              58899999875422      111111111111111000     00111111 1111122223333322222222222 


Q ss_pred             hccCCcEEEeecCCCccChhhHhHhhhhhccccCc-c-----ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEEecCc
Q 044485          169 LGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGM-Y-----SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLVVDGG  242 (257)
Q Consensus       169 ~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~~dgG  242 (257)
                        ..|+....++|+.+..+................ .     ......++..+|+|++++.++.... ..++..+.+.++
T Consensus       142 --~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~~~~~~~~~~~~  218 (307)
T d1qyca_         142 --AEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR-TLNKTLYLRLPA  218 (307)
T ss_dssp             --HHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG-GTTEEEECCCGG
T ss_pred             --ccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChh-hcCceeEEeCCC
Confidence              357888999999887765433221111111100 0     1222336789999999998886543 233444455555


Q ss_pred             eeee
Q 044485          243 FAIV  246 (257)
Q Consensus       243 ~~~~  246 (257)
                      ..++
T Consensus       219 ~~~s  222 (307)
T d1qyca_         219 NTLS  222 (307)
T ss_dssp             GEEE
T ss_pred             CccC
Confidence            5554

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.28  E-value=3.2e-11  Score=98.46  Aligned_cols=210  Identities=12%  Similarity=0.082  Sum_probs=111.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhH----hHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGE----SVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~----~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ++||||||||.||++++++|.++|++|+++.|+.....    +.......     ..+.++.+|+.|.+++.+.+.    
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~-----~~v~~v~~d~~d~~~~~~~~~----   74 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ-----LGAKLIEASLDDHQRLVDALK----   74 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT-----TTCEEECCCSSCHHHHHHHHT----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhcc-----CCcEEEEeecccchhhhhhcc----
Confidence            46999999999999999999999999999999754321    11222222     238889999999988877664    


Q ss_pred             HcCCccEEEeCCCCCCCCCCCCCCCCHHHH-HHHHhhhchhhhHHHHHHHhhhccccCC--CCchhhhhHHHHHHHHHHH
Q 044485           89 QYGKLDIMFNNAGTVDEVKPNILDNDQAEF-ERILSINLVGAFLGRNMLLGVCGIIGGA--ATHAYTSSKHGLLGLMKNT  165 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~s~~~~~~~~--~~~~y~~sK~a~~~~~~~l  165 (257)
                         +.+.++++++.....   ......... .........     ...+.|..+..+..  ....+...+......++..
T Consensus        75 ---~~~~~~~~~~~~~~~---~~~~~~~~~l~~a~~~~~~-----~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (312)
T d1qyda_          75 ---QVDVVISALAGGVLS---HHILEQLKLVEAIKEAGNI-----KRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRA  143 (312)
T ss_dssp             ---TCSEEEECCCCSSSS---TTTTTHHHHHHHHHHSCCC-----SEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHH
T ss_pred             ---Ccchhhhhhhhcccc---cchhhhhHHHHHHHHhcCC-----cEEEEeeccccCCCcccccchhhhhhHHHHHHHHh
Confidence               688899888754221   111111111 110000000     00011222211111  1112233333333333322


Q ss_pred             HHHhccCCcEEEeecCCCccChhhHhHhhhhhcc---ccCcc----ccccCCCCCHHHHHHHHHHhcCCCCCcccccEEE
Q 044485          166 AVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDG---LGGMY----SNLKGAVLEPEDAAEAALYLGSDESKCVSGHNLV  238 (257)
Q Consensus       166 ~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~a~~~~~l~s~~~~~~~G~~~~  238 (257)
                      ..   ..|+....++|+.+..+............   .....    ......++.++|+|++++.++.+. ...++..+.
T Consensus       144 ~~---~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~-~~~~~~~~~  219 (312)
T d1qyda_         144 IE---AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP-QTLNKTMYI  219 (312)
T ss_dssp             HH---HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCG-GGSSSEEEC
T ss_pred             hc---ccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCc-cccCceEEE
Confidence            22   35788899999988665432211110000   00000    112233678999999999888653 223344455


Q ss_pred             ecCceeee
Q 044485          239 VDGGFAIV  246 (257)
Q Consensus       239 ~dgG~~~~  246 (257)
                      +.++..++
T Consensus       220 ~~~~~~~s  227 (312)
T d1qyda_         220 RPPMNILS  227 (312)
T ss_dssp             CCGGGEEE
T ss_pred             eCCCcCCC
Confidence            65555544

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.28  E-value=5.3e-12  Score=102.67  Aligned_cols=199  Identities=13%  Similarity=0.034  Sum_probs=111.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      +||||||+|.||+++++.|.++|..|.+ +++...                    +.+|++|.+.++++++..     .+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~~--------------------~~~Dl~~~~~~~~~i~~~-----~~   55 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSKE--------------------FCGDFSNPKGVAETVRKL-----RP   55 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCSS--------------------SCCCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCcc--------------------ccCcCCCHHHHHHHHHHc-----CC
Confidence            6999999999999999999998865544 333211                    236999999999888765     69


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH---------hhhccc------------cCCCCchhh
Q 044485           94 DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL---------GVCGII------------GGAATHAYT  152 (257)
Q Consensus        94 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~---------s~~~~~------------~~~~~~~y~  152 (257)
                      |+|||+||....  . .   +.+.....+++|+.++..+.....         +.....            +..+...|+
T Consensus        56 D~Vih~Aa~~~~--~-~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~  129 (298)
T d1n2sa_          56 DVIVNAAAHTAV--D-K---AESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYG  129 (298)
T ss_dssp             SEEEECCCCCCH--H-H---HTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHH
T ss_pred             CEEEEecccccc--c-c---cccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCCchHh
Confidence            999999996532  1 1   112235677888888888765551         222111            112234799


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHhHhhhhhccccCccccccCCCCCHHHHHHHHHHhcCCC-CCc
Q 044485          153 SSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDAAEAALYLGSDE-SKC  231 (257)
Q Consensus       153 ~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~-~~~  231 (257)
                      .+|.+.+.+.+......  .-++......+.-..........................+....++++.+..++... ...
T Consensus       130 ~~k~~~e~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~  207 (298)
T d1n2sa_         130 KTKLAGEKALQDNCPKH--LIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKP  207 (298)
T ss_dssp             HHHHHHHHHHHHHCSSE--EEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCG
T ss_pred             hhhhhhhhhHHhhhccc--ccccccceeeccCCccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhccc
Confidence            99988887665422111  112333333333223221111111111111111222233556788888776654321 111


Q ss_pred             ccccEEEecCceeee
Q 044485          232 VSGHNLVVDGGFAIV  246 (257)
Q Consensus       232 ~~G~~~~~dgG~~~~  246 (257)
                      -.+..+++.++..++
T Consensus       208 ~~~~~~n~~~~~~~~  222 (298)
T d1n2sa_         208 EVAGLYHLVAGGTTT  222 (298)
T ss_dssp             GGCEEEECCCBSCEE
T ss_pred             cccccccccCCCcee
Confidence            356667777665544

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.18  E-value=8e-12  Score=97.17  Aligned_cols=178  Identities=18%  Similarity=0.112  Sum_probs=105.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .|++|||||||.||++++++|.++|.  .|++..|++...                ...+..+..|..++..      ..
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~----------------~~~~~~~~~d~~~~~~------~~   59 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE----------------HPRLDNPVGPLAELLP------QL   59 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC----------------CTTEECCBSCHHHHGG------GC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh----------------cccccccccchhhhhh------cc
Confidence            48999999999999999999999997  567666654210                1112334444433322      12


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhccccCCCCchhhhhHHHHH
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIGGAATHAYTSSKHGLL  159 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~~~~~~~y~~sK~a~~  159 (257)
                      .+.+|.+|+++|.....     .   .......++|+.++..+.....          |..+.. ......|..+|...|
T Consensus        60 ~~~~d~vi~~~g~~~~~-----~---~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~-~~~~~~y~~~K~~~E  130 (212)
T d2a35a1          60 DGSIDTAFCCLGTTIKE-----A---GSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGAD-AKSSIFYNRVKGELE  130 (212)
T ss_dssp             CSCCSEEEECCCCCHHH-----H---SSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCC-TTCSSHHHHHHHHHH
T ss_pred             ccchheeeeeeeeeccc-----c---ccccccccchhhhhhhcccccccccccccccccccccc-cccccchhHHHHHHh
Confidence            34689999999864210     0   1124566778888877765541          111211 233457899998877


Q ss_pred             HHHHHHHHHhccCCc-EEEeecCCCccChhhHhHhhhhhccccCccccccC--CCCCHHHHHHHHHHhcCCCC
Q 044485          160 GLMKNTAVELGRFGI-RVNCVSPYAVSTPLAKDFLKLADDGLGGMYSNLKG--AVLEPEDAAEAALYLGSDES  229 (257)
Q Consensus       160 ~~~~~l~~e~~~~gi-~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~~l~s~~~  229 (257)
                      ...+       ..+. +.+.++|+.+..+.......  ............+  +.+..+|+|++++.++.+..
T Consensus       131 ~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         131 QALQ-------EQGWPQLTIARPSLLFGPREEFRLA--EILAAPIARILPGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             HHHT-------TSCCSEEEEEECCSEESTTSCEEGG--GGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             hhcc-------ccccccceeeCCcceeCCcccccHH--HHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence            6553       2344 67889999997764321111  0001110000001  13678999999999887653

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.08  E-value=6.9e-10  Score=92.42  Aligned_cols=200  Identities=13%  Similarity=0.092  Sum_probs=111.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHH-HHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDI-ENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v-~~~~~~~~~~   89 (257)
                      +.|+|+||||||.||.+++++|.++|++|+++.|+..+...  +.+...    ..+..+.+|+.|..++ +.+       
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~~----~~v~~~~gD~~d~~~~~~~a-------   68 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAI----PNVTLFQGPLLNNVPLMDTL-------   68 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHTS----TTEEEEESCCTTCHHHHHHH-------
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhccc----CCCEEEEeeCCCcHHHHHHH-------
Confidence            45899999999999999999999999999999998765322  222221    1288999999986553 322       


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHH---HH-HH-Hhhhc--cccCCCCchhhhhHHHHHHHH
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLG---RN-ML-LGVCG--IIGGAATHAYTSSKHGLLGLM  162 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l---~~-~~-~s~~~--~~~~~~~~~y~~sK~a~~~~~  162 (257)
                      +...|.++.+......       .....     ..|+.-...-   .+ .+ ++...  ..+......|..+|...+.+.
T Consensus        69 ~~~~~~~~~~~~~~~~-------~~~~~-----~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~  136 (350)
T d1xgka_          69 FEGAHLAFINTTSQAG-------DEIAI-----GKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYV  136 (350)
T ss_dssp             HTTCSEEEECCCSTTS-------CHHHH-----HHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHH
T ss_pred             hcCCceEEeecccccc-------hhhhh-----hhHHHHHHHHhCCCceEEEeeccccccCCcccchhhhhhHHHHHHHH
Confidence            2468888877543211       11111     1111111100   00 01 12111  122233446777887776655


Q ss_pred             HHHHHHhccCCcEEEeecCCCccChhhHhHhhhh--hccccCcc--cccc-----CCCCC-HHHHHHHHHHhcCCCCCcc
Q 044485          163 KNTAVELGRFGIRVNCVSPYAVSTPLAKDFLKLA--DDGLGGMY--SNLK-----GAVLE-PEDAAEAALYLGSDESKCV  232 (257)
Q Consensus       163 ~~l~~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~--~~~~~~~~--~~~~-----~~~~~-~~~~a~~~~~l~s~~~~~~  232 (257)
                      +.       .++....+.|+.+............  ........  ..+.     ..++. .+|+++++..++.+.....
T Consensus       137 ~~-------~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~  209 (350)
T d1xgka_         137 RQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKW  209 (350)
T ss_dssp             HT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHH
T ss_pred             Hh-------hccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhc
Confidence            43       4577788888876543211110000  00000000  0110     01233 4799999998886655557


Q ss_pred             cccEEEecCc
Q 044485          233 SGHNLVVDGG  242 (257)
Q Consensus       233 ~G~~~~~dgG  242 (257)
                      .|+.+.+.|.
T Consensus       210 ~G~~~~~~g~  219 (350)
T d1xgka_         210 NGHRIALTFE  219 (350)
T ss_dssp             TTCEEEECSE
T ss_pred             CCeEEEEeCC
Confidence            8999999875

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.85  E-value=1.8e-08  Score=81.50  Aligned_cols=203  Identities=16%  Similarity=0.181  Sum_probs=111.7

Q ss_pred             EEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH--HcC
Q 044485           15 ALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT--QYG   91 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~--~~~   91 (257)
                      ||||||+|.||.+++++|+++|. .|+++++-.... +.....+          ...+|..+.+..   ......  .+.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~~~~~----------~~~~~~~~~~~~---~~~~~~~~~~~   67 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFVNLVD----------LNIADYMDKEDF---LIQIMAGEEFG   67 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGHHHHT----------SCCSEEEEHHHH---HHHHHTTCCCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhhcccc----------cchhhhccchHH---HHHHhhhhccc
Confidence            79999999999999999999996 588776322211 1111111          111233333332   333322  335


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHhhhchhhhHHHHHHH----------hhhcccc-----------CCCCch
Q 044485           92 KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGRNMLL----------GVCGIIG-----------GAATHA  150 (257)
Q Consensus        92 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----------s~~~~~~-----------~~~~~~  150 (257)
                      .+++++|.|+....     .....   ....+.|+.+...+.....          +.....+           ..+...
T Consensus        68 ~~~~i~~~aa~~~~-----~~~~~---~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~  139 (307)
T d1eq2a_          68 DVEAIFHEGACSST-----TEWDG---KYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNV  139 (307)
T ss_dssp             SCCEEEECCSCCCT-----TCCCH---HHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred             chhhhhhhcccccc-----ccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            68999999885432     12222   3344556666665533331          1111111           123457


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEeecCCCccChhhHh----------HhhhhhccccCc--c--ccccCCCCCHHH
Q 044485          151 YTSSKHGLLGLMKNTAVELGRFGIRVNCVSPYAVSTPLAKD----------FLKLADDGLGGM--Y--SNLKGAVLEPED  216 (257)
Q Consensus       151 y~~sK~a~~~~~~~l~~e~~~~gi~v~~i~pg~v~t~~~~~----------~~~~~~~~~~~~--~--~~~~~~~~~~~~  216 (257)
                      |+.+|.+.+.+++.+..+   .++.+..++|..+..|....          ............  .  ......+...+|
T Consensus       140 Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d  216 (307)
T d1eq2a_         140 YGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD  216 (307)
T ss_dssp             HHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred             cccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeeccc
Confidence            999999999999887665   46777777776665542210          000000000000  0  122234667899


Q ss_pred             HHHHHHHhcCCCCCcccccEEEecCceeee
Q 044485          217 AAEAALYLGSDESKCVSGHNLVVDGGFAIV  246 (257)
Q Consensus       217 ~a~~~~~l~s~~~~~~~G~~~~~dgG~~~~  246 (257)
                      ++.++..+.....    ...+++.+|...+
T Consensus       217 ~~~~~~~~~~~~~----~~~~~~~~~~~~s  242 (307)
T d1eq2a_         217 VADVNLWFLENGV----SGIFNLGTGRAES  242 (307)
T ss_dssp             HHHHHHHHHHHCC----CEEEEESCSCCBC
T ss_pred             HHHHHHHHhhhcc----ccccccccccchh
Confidence            9999987775532    3467777665543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.83  E-value=7.1e-10  Score=84.44  Aligned_cols=45  Identities=13%  Similarity=0.314  Sum_probs=40.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhcc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGS   58 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~   58 (257)
                      ++.|+||+|++|+++|+.|++.|++|++.+|++++++++.+++..
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~   46 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR   46 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            567888889999999999999999999999999999888887754

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.23  E-value=9.9e-07  Score=66.08  Aligned_cols=79  Identities=23%  Similarity=0.343  Sum_probs=56.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|.++||+||+|++|.+.++-....|++|+.+.+++++.+.+.+ ..        .. ..+|-.+++..+...+..  ..
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~-~G--------a~-~vi~~~~~~~~~~~~~~~--~~   96 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-IG--------FD-AAFNYKTVNSLEEALKKA--SP   96 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT--------CS-EEEETTSCSCHHHHHHHH--CT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh-hh--------hh-hhcccccccHHHHHHHHh--hc
Confidence            58899999999999999999999999999999998876554433 21        11 113444444444433332  12


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                      .++|+++++.|
T Consensus        97 ~Gvd~v~D~vG  107 (182)
T d1v3va2          97 DGYDCYFDNVG  107 (182)
T ss_dssp             TCEEEEEESSC
T ss_pred             CCCceeEEecC
Confidence            36999999998

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.20  E-value=2.2e-06  Score=64.14  Aligned_cols=84  Identities=15%  Similarity=0.292  Sum_probs=64.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHH---HhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCK---DIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~---~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      .++++|+++|.|+ ||.|++++..|.+.|+. ++++.|+.+..+++..   .+....    .......|+.+.+++...+
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~   88 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT----DCVVTVTDLADQQAFAEAL   88 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS----SCEEEEEETTCHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc----CcceEeeecccccchhhhh
Confidence            4788999999998 79999999999999985 8899999877665543   332221    1446678888888776654


Q ss_pred             HHHHHHcCCccEEEeCCCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTV  103 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~  103 (257)
                      .       ..|++||+....
T Consensus        89 ~-------~~diiIN~Tp~G  101 (182)
T d1vi2a1          89 A-------SADILTNGTKVG  101 (182)
T ss_dssp             H-------TCSEEEECSSTT
T ss_pred             c-------ccceeccccCCc
Confidence            4       689999998753

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.19  E-value=8e-06  Score=59.59  Aligned_cols=88  Identities=17%  Similarity=0.334  Sum_probs=64.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .+++++++||.|+ |++|+.+++.|...|+. +.++.|+.++.+++.+++.        ..++     +.+++...+.  
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~--------~~~~-----~~~~~~~~l~--   83 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG--------GEAV-----RFDELVDHLA--   83 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT--------CEEC-----CGGGHHHHHH--
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh--------cccc-----cchhHHHHhc--
Confidence            3789999999998 99999999999999984 9999999988888887763        2222     2233333332  


Q ss_pred             HHHcCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHH
Q 044485           87 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERIL  122 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~  122 (257)
                           ..|+||++.+...+      -.+.+.+...+
T Consensus        84 -----~~Divi~atss~~~------ii~~~~i~~~~  108 (159)
T d1gpja2          84 -----RSDVVVSATAAPHP------VIHVDDVREAL  108 (159)
T ss_dssp             -----TCSEEEECCSSSSC------CBCHHHHHHHH
T ss_pred             -----cCCEEEEecCCCCc------cccHhhhHHHH
Confidence                 69999999985432      34455555543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.18  E-value=5.6e-06  Score=60.99  Aligned_cols=83  Identities=17%  Similarity=0.175  Sum_probs=58.2

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -.|.+++|+| +|++|...++.+...|++|+++++++++++.+.+ +..       -..+..|-. .++.....+++.+.
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~ga-------~~~~~~~~~-~~~~~~~~~~~~~~   94 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CGA-------DVTLVVDPA-KEEESSIIERIRSA   94 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTC-------SEEEECCTT-TSCHHHHHHHHHHH
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-cCC-------cEEEecccc-ccccchhhhhhhcc
Confidence            3577999997 5899999999999999999999999988765544 211       122223332 23344445566665


Q ss_pred             cC-CccEEEeCCCC
Q 044485           90 YG-KLDIMFNNAGT  102 (257)
Q Consensus        90 ~~-~id~lv~~ag~  102 (257)
                      .| .+|++|.++|.
T Consensus        95 ~g~g~D~vid~~g~  108 (170)
T d1e3ja2          95 IGDLPNVTIDCSGN  108 (170)
T ss_dssp             SSSCCSEEEECSCC
T ss_pred             cccCCceeeecCCC
Confidence            54 69999999984

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=3.5e-06  Score=62.48  Aligned_cols=79  Identities=16%  Similarity=0.209  Sum_probs=55.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|.++||+||+|++|...++.....|++|+++++++++.+.+ +++.        .. ...|.++++-.+++.+...  -
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-~~~G--------a~-~vi~~~~~~~~~~i~~~t~--~   95 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQNG--------AH-EVFNHREVNYIDKIKKYVG--E   95 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT--------CS-EEEETTSTTHHHHHHHHHC--T
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc-cccC--------cc-cccccccccHHHHhhhhhc--c
Confidence            688999999999999999999999999999999887665444 3332        11 1246666554433322221  1


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                      .++|+++.+.|
T Consensus        96 ~g~d~v~d~~g  106 (174)
T d1yb5a2          96 KGIDIIIEMLA  106 (174)
T ss_dssp             TCEEEEEESCH
T ss_pred             CCceEEeeccc
Confidence            25999999987

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.10  E-value=8.2e-06  Score=60.24  Aligned_cols=75  Identities=17%  Similarity=0.234  Sum_probs=56.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|+|+|.|| |.+|+.+|+.|+++|++|++.+|+.+..+++.+....       ......+..+.......+.       
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~-------~~~~~~~~~~~~~~~~~i~-------   66 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQH-------STPISLDVNDDAALDAEVA-------   66 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTT-------EEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccc-------cccccccccchhhhHhhhh-------
Confidence            589999987 9999999999999999999999999988887665531       3444556666665555543       


Q ss_pred             CccEEEeCCC
Q 044485           92 KLDIMFNNAG  101 (257)
Q Consensus        92 ~id~lv~~ag  101 (257)
                      ..|.++.+..
T Consensus        67 ~~~~~i~~~~   76 (182)
T d1e5qa1          67 KHDLVISLIP   76 (182)
T ss_dssp             TSSEEEECSC
T ss_pred             ccceeEeecc
Confidence            5677776553

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.05  E-value=4.7e-06  Score=61.95  Aligned_cols=80  Identities=16%  Similarity=0.196  Sum_probs=58.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|+++||+||+|++|...++-....|++|+.+++++++.+.+. ++..        . ..+|.++++-.+++ .++.. -
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~lGa--------~-~vi~~~~~d~~~~v-~~~t~-g   95 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGA--------W-QVINYREEDLVERL-KEITG-G   95 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTC--------S-EEEETTTSCHHHHH-HHHTT-T
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hcCC--------e-EEEECCCCCHHHHH-HHHhC-C
Confidence            5789999999999999999999999999999999998876554 3321        1 22466665544443 22221 1


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                      ..+|+++.+.|.
T Consensus        96 ~g~d~v~d~~g~  107 (179)
T d1qora2          96 KKVRVVYDSVGR  107 (179)
T ss_dssp             CCEEEEEECSCG
T ss_pred             CCeEEEEeCccH
Confidence            368999999873

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.02  E-value=9.5e-06  Score=57.20  Aligned_cols=73  Identities=23%  Similarity=0.352  Sum_probs=58.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      +.++|.|+ |.+|+.+++.|.++|++|++++++++..++..++..        +.++..|.+|++.++++-      ...
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~--------~~vi~Gd~~~~~~l~~~~------i~~   65 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEID--------ALVINGDCTKIKTLEDAG------IED   65 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCS--------SEEEESCTTSHHHHHHTT------TTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhh--------hhhccCcccchhhhhhcC------hhh
Confidence            37899998 999999999999999999999999988877665431        678899999998776641      125


Q ss_pred             ccEEEeCC
Q 044485           93 LDIMFNNA  100 (257)
Q Consensus        93 id~lv~~a  100 (257)
                      .|.++...
T Consensus        66 a~~vv~~t   73 (132)
T d1lssa_          66 ADMYIAVT   73 (132)
T ss_dssp             CSEEEECC
T ss_pred             hhhhcccC
Confidence            77777654

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.02  E-value=4.2e-06  Score=62.40  Aligned_cols=77  Identities=16%  Similarity=0.217  Sum_probs=54.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|.++||+||+|++|...++.+...|++|+++.+++++.+.+ ++.   +     +. ...|..+++-.++    +++..
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l-~~~---G-----a~-~vi~~~~~~~~~~----v~~~t   90 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-SRL---G-----VE-YVGDSRSVDFADE----ILELT   90 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HTT---C-----CS-EEEETTCSTHHHH----HHHHT
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccccc-ccc---c-----cc-ccccCCccCHHHH----HHHHh
Confidence            478999999999999999999999999999999887665433 322   2     11 1235555543333    33332


Q ss_pred             --CCccEEEeCCC
Q 044485           91 --GKLDIMFNNAG  101 (257)
Q Consensus        91 --~~id~lv~~ag  101 (257)
                        .++|+++.+.|
T Consensus        91 ~~~g~d~v~d~~g  103 (183)
T d1pqwa_          91 DGYGVDVVLNSLA  103 (183)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             CCCCEEEEEeccc
Confidence              26999999998

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.97  E-value=4.5e-06  Score=62.77  Aligned_cols=87  Identities=14%  Similarity=0.209  Sum_probs=57.4

Q ss_pred             CCcEEEE-ecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALI-TGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lI-tGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .|.+++| +||+|++|.+.++-....|++|+.+.|+.+..++..+.+++.+-    -+++..|-.+.......+.++...
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGa----d~vi~~~~~~~~~~~~~v~~~~~~  103 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA----TQVITEDQNNSREFGPTIKEWIKQ  103 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC----SEEEEHHHHHCGGGHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccc----cEEEeccccchhHHHHHHHHHHhh
Confidence            3455555 79999999999999999999999999888777766655544331    122322222222333444454443


Q ss_pred             -cCCccEEEeCCC
Q 044485           90 -YGKLDIMFNNAG  101 (257)
Q Consensus        90 -~~~id~lv~~ag  101 (257)
                       .+++|+++++.|
T Consensus       104 ~g~~vdvv~D~vg  116 (189)
T d1gu7a2         104 SGGEAKLALNCVG  116 (189)
T ss_dssp             HTCCEEEEEESSC
T ss_pred             ccCCceEEEECCC
Confidence             347999999987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.94  E-value=8.3e-06  Score=51.62  Aligned_cols=44  Identities=23%  Similarity=0.341  Sum_probs=38.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVC   53 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~   53 (257)
                      -++.++||+||+||+|...++-+...|++|+.+.+++++.+.+.
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            35789999999999999999988889999999999887765543

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.88  E-value=3.7e-05  Score=57.12  Aligned_cols=81  Identities=16%  Similarity=0.239  Sum_probs=55.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ..|.++||+|+ |++|...++.+...|+ +|+++++++++++.+ +++..       -.+  .|..+. +..+..+++.+
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~lGa-------~~v--i~~~~~-~~~~~~~~i~~   94 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEIGA-------DLT--LNRRET-SVEERRKAIMD   94 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHTTC-------SEE--EETTTS-CHHHHHHHHHH
T ss_pred             CCCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccccc-------eEE--Eecccc-chHHHHHHHHH
Confidence            36889999997 8999999999999998 699999998877554 44421       122  244332 22223344444


Q ss_pred             Hc--CCccEEEeCCCC
Q 044485           89 QY--GKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~--~~id~lv~~ag~  102 (257)
                      ..  .++|++|.++|.
T Consensus        95 ~~~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          95 ITHGRGADFILEATGD  110 (182)
T ss_dssp             HTTTSCEEEEEECSSC
T ss_pred             hhCCCCceEEeecCCc
Confidence            32  259999999985

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.86  E-value=2.1e-05  Score=57.92  Aligned_cols=77  Identities=14%  Similarity=0.127  Sum_probs=57.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+++||.+||.|+ ||.+++++..|.+.|++++++.|+.++.+++.+.......    +..+  +..+.           
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~----~~~~--~~~~~-----------   75 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGS----IQAL--SMDEL-----------   75 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSS----EEEC--CSGGG-----------
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccc----cccc--ccccc-----------
Confidence            3678999999997 9999999999999999999999999988888877654321    2222  22211           


Q ss_pred             HHcCCccEEEeCCCCC
Q 044485           88 TQYGKLDIMFNNAGTV  103 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~  103 (257)
                       .....|++||+....
T Consensus        76 -~~~~~dliIN~Tp~G   90 (170)
T d1nyta1          76 -EGHEFDLIINATSSG   90 (170)
T ss_dssp             -TTCCCSEEEECCSCG
T ss_pred             -cccccceeecccccC
Confidence             113689999997654

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.83  E-value=9.5e-06  Score=60.19  Aligned_cols=79  Identities=14%  Similarity=0.209  Sum_probs=52.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..|.++||+||+||+|...++-....|++|+.+++++++.+.+.+ +..       -+++  |-.+  ...+.++.+  .
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-lGa-------~~vi--~~~~--~~~~~~~~~--~   95 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LGA-------KEVL--ARED--VMAERIRPL--D   95 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TTC-------SEEE--ECC-----------C--C
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-ccc-------ceee--ecch--hHHHHHHHh--h
Confidence            347899999999999999999999999999999999887655543 321       1122  3221  112222211  1


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      -+++|+++.+.|.
T Consensus        96 ~~gvD~vid~vgg  108 (176)
T d1xa0a2          96 KQRWAAAVDPVGG  108 (176)
T ss_dssp             SCCEEEEEECSTT
T ss_pred             ccCcCEEEEcCCc
Confidence            2479999999984

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.78  E-value=2.6e-05  Score=57.40  Aligned_cols=75  Identities=19%  Similarity=0.297  Sum_probs=52.7

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..|+++||+||+|++|...++.....|++|+.+++++++.+... ++.        +.. ..|..+.      .++... 
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~lG--------a~~-~i~~~~~------~~~~~~-   88 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALG--------AEE-AATYAEV------PERAKA-   88 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTT--------CSE-EEEGGGH------HHHHHH-
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-ccc--------cce-eeehhhh------hhhhhc-
Confidence            47889999999999999999999999999999998877665543 332        111 1233221      122222 


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                      ..++|+++++.|
T Consensus        89 ~~g~D~v~d~~G  100 (171)
T d1iz0a2          89 WGGLDLVLEVRG  100 (171)
T ss_dssp             TTSEEEEEECSC
T ss_pred             cccccccccccc
Confidence            346999999876

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.78  E-value=7.3e-05  Score=54.98  Aligned_cols=78  Identities=12%  Similarity=0.089  Sum_probs=59.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++++|+++|.|+ ||.+++++..|.+.+.+|+++.|+.++.++..+.+....    .+..+..|-.+            
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~----~~~~~~~~~~~------------   76 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG----NIQAVSMDSIP------------   76 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS----CEEEEEGGGCC------------
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc----ccchhhhcccc------------
Confidence            4678999999987 888999999999988889999999999988888876432    14444443211            


Q ss_pred             HHcCCccEEEeCCCCCC
Q 044485           88 TQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~  104 (257)
                        ....|++||+.....
T Consensus        77 --~~~~diiIN~tp~g~   91 (171)
T d1p77a1          77 --LQTYDLVINATSAGL   91 (171)
T ss_dssp             --CSCCSEEEECCCC--
T ss_pred             --ccccceeeecccccc
Confidence              246899999987643

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=0.00016  Score=52.89  Aligned_cols=80  Identities=23%  Similarity=0.342  Sum_probs=56.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .+.+++|.|+ |++|...++.+...|+ +|+++++++++++.. +++..       -+++..+-.+....   .+.+...
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~Ga-------~~~~~~~~~~~~~~---~~~~~~~   93 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIGA-------DLVLQISKESPQEI---ARKVEGQ   93 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTC-------SEEEECSSCCHHHH---HHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHhCC-------cccccccccccccc---ccccccc
Confidence            4678999987 9999999999999999 699999998887654 34421       12333333344444   3344444


Q ss_pred             cC-CccEEEeCCCC
Q 044485           90 YG-KLDIMFNNAGT  102 (257)
Q Consensus        90 ~~-~id~lv~~ag~  102 (257)
                      ++ ++|++|.++|.
T Consensus        94 ~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          94 LGCKPEVTIECTGA  107 (171)
T ss_dssp             HTSCCSEEEECSCC
T ss_pred             CCCCceEEEeccCC
Confidence            43 69999999984

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.71  E-value=2.3e-05  Score=58.63  Aligned_cols=78  Identities=15%  Similarity=0.279  Sum_probs=54.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      +++|||+||+||+|...++-....|+. |+.+++++++..+...++...         ...|..+++ ..+.++++..  
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad---------~vi~~~~~~-~~~~~~~~~~--   98 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD---------AAVNYKTGN-VAEQLREACP--   98 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS---------EEEETTSSC-HHHHHHHHCT--
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce---------EEeeccchh-HHHHHHHHhc--
Confidence            479999999999999999999889997 455566766666666665321         234555443 3333444332  


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                      .++|+++.+.|
T Consensus        99 ~GvDvv~D~vG  109 (187)
T d1vj1a2          99 GGVDVYFDNVG  109 (187)
T ss_dssp             TCEEEEEESSC
T ss_pred             cCceEEEecCC
Confidence            36999999998

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.66  E-value=2.6e-05  Score=59.96  Aligned_cols=80  Identities=21%  Similarity=0.249  Sum_probs=54.9

Q ss_pred             cccCCcEEEEecC----------------CCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEec
Q 044485            8 RRLQGKVALITGG----------------ARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHC   71 (257)
Q Consensus         8 ~~~~~k~~lItGa----------------s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~   71 (257)
                      .+|.|+++|||+|                ||-.|.+||+++..+|++|.++......          ..+.  .+..+  
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------~~p~--~~~~~--   67 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----------PTPP--FVKRV--   67 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----------CCCT--TEEEE--
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc----------Cccc--ccccc--
Confidence            4789999999986                6889999999999999999887654321          0111  13333  


Q ss_pred             CCCCHHHHHHHHHHHHHHcCCccEEEeCCCCCC
Q 044485           72 DVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        72 D~~~~~~v~~~~~~~~~~~~~id~lv~~ag~~~  104 (257)
                      .+.+.++...   .+.+.....|++|++|++..
T Consensus        68 ~~~t~~~m~~---~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          68 DVMTALEMEA---AVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             ECCSHHHHHH---HHHHHGGGCSEEEECCBCCS
T ss_pred             eehhhHHHHH---HHHhhhccceeEeeeechhh
Confidence            3344444444   34444456899999999764

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.63  E-value=7e-05  Score=54.84  Aligned_cols=80  Identities=11%  Similarity=0.248  Sum_probs=55.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .+.+++|.|++|++|...++.+...|+ .|+++++++++++...+ +.        .. ...|.++.+..++..+...  
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~G--------a~-~~i~~~~~~~~~~~~~~~~--   94 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-AG--------AD-YVINASMQDPLAEIRRITE--   94 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-HT--------CS-EEEETTTSCHHHHHHHHTT--
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-cC--------Cc-eeeccCCcCHHHHHHHHhh--
Confidence            577999999999999999999999995 68999988877655543 32        11 1234455444444332221  


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      -+.+|++|.++|.
T Consensus        95 ~~~~d~vid~~g~  107 (170)
T d1jvba2          95 SKGVDAVIDLNNS  107 (170)
T ss_dssp             TSCEEEEEESCCC
T ss_pred             cccchhhhccccc
Confidence            1359999999984

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.57  E-value=3.9e-05  Score=53.89  Aligned_cols=73  Identities=16%  Similarity=0.233  Sum_probs=55.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |+++|.|+ |-+|+.+++.|.++|..|++++.+++..+++.++    +     ...+.+|.++++.++++-      ...
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~----~-----~~~~~gd~~~~~~l~~a~------i~~   64 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY----A-----THAVIANATEENELLSLG------IRN   64 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTT----C-----SEEEECCTTCTTHHHHHT------GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHh----C-----CcceeeecccchhhhccC------Ccc
Confidence            56788877 8999999999999999999999998776555322    1     456779999998776541      125


Q ss_pred             ccEEEeCCC
Q 044485           93 LDIMFNNAG  101 (257)
Q Consensus        93 id~lv~~ag  101 (257)
                      .|.+|...+
T Consensus        65 a~~vi~~~~   73 (134)
T d2hmva1          65 FEYVIVAIG   73 (134)
T ss_dssp             CSEEEECCC
T ss_pred             ccEEEEEcC
Confidence            778777665

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.50  E-value=7.8e-05  Score=54.97  Aligned_cols=80  Identities=13%  Similarity=0.074  Sum_probs=53.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++++.+. ++..       .+  .+|..+.+..++ +.++...
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~lGa-------~~--~i~~~~~~~~~~-v~~~t~g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FYGA-------TD--ILNYKNGHIEDQ-VMKLTNG   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HHTC-------SE--EECGGGSCHHHH-HHHHTTT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hhCc-------cc--cccccchhHHHH-HHHHhhc
Confidence            5789999986 8999999999999998 5999999887765553 3421       12  234444333332 2222211


Q ss_pred             cCCccEEEeCCCCC
Q 044485           90 YGKLDIMFNNAGTV  103 (257)
Q Consensus        90 ~~~id~lv~~ag~~  103 (257)
                       .++|++|.++|..
T Consensus        95 -~G~D~vid~~g~~  107 (174)
T d1jqba2          95 -KGVDRVIMAGGGS  107 (174)
T ss_dssp             -SCEEEEEECSSCT
T ss_pred             -cCcceEEEccCCH
Confidence             2599999999953

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.49  E-value=0.00013  Score=53.61  Aligned_cols=80  Identities=21%  Similarity=0.329  Sum_probs=53.7

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC-HHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK-EKDIENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~   87 (257)
                      -.|.+++|.|+ +|+|...++.++..|+ +|+++++++++++...+ +..       .+.  .|..+ .+.+....+...
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~Ga-------~~~--i~~~~~~~~~~~~~~~~~   95 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-VGA-------TEC--VNPQDYKKPIQEVLTEMS   95 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTC-------SEE--ECGGGCSSCHHHHHHHHT
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-hCC-------eeE--EecCCchhHHHHHHHHHh
Confidence            36789999999 7899999999999985 69999999888765543 311       111  22222 233444333332


Q ss_pred             HHcCCccEEEeCCCC
Q 044485           88 TQYGKLDIMFNNAGT  102 (257)
Q Consensus        88 ~~~~~id~lv~~ag~  102 (257)
                      .  +++|++|.+.|.
T Consensus        96 ~--~G~D~vid~~G~  108 (176)
T d2jhfa2          96 N--GGVDFSFEVIGR  108 (176)
T ss_dssp             T--SCBSEEEECSCC
T ss_pred             c--CCCCEEEecCCc
Confidence            2  479999999985

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.43  E-value=0.0002  Score=52.64  Aligned_cols=79  Identities=14%  Similarity=0.244  Sum_probs=52.4

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeE-EEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKV-LIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~V-i~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      -.|.+++|.|+ |++|...++.+...|+.+ +++++++.+++.+ +++..       .++  .|..+++..++ ++++. 
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~Ga-------~~~--i~~~~~~~~~~-i~~~t-   93 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGA-------THV--INSKTQDPVAA-IKEIT-   93 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTC-------SEE--EETTTSCHHHH-HHHHT-
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHcCC-------eEE--EeCCCcCHHHH-HHHHc-
Confidence            36789999997 899999999999999874 5566777665554 34421       122  35555433332 33332 


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                       .+++|++|.+.|.
T Consensus        94 -~gg~D~vid~~G~  106 (174)
T d1f8fa2          94 -DGGVNFALESTGS  106 (174)
T ss_dssp             -TSCEEEEEECSCC
T ss_pred             -CCCCcEEEEcCCc
Confidence             2479999999984

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.42  E-value=7.1e-05  Score=54.82  Aligned_cols=44  Identities=18%  Similarity=0.373  Sum_probs=38.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK   54 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   54 (257)
                      .+.++||+||+||+|.+.++.....|++|+.+.+++++.+.+.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~   66 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ   66 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh
Confidence            45689999999999999999999999999999999887666544

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.41  E-value=0.00016  Score=53.37  Aligned_cols=81  Identities=17%  Similarity=0.227  Sum_probs=54.4

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      -.|.+++|.|+ ||+|...++.+...|+ +|+++++++++++...+ +..       -++  .|..+.+...+.+.+...
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~GA-------~~~--in~~~~~~~~~~~~~~~~   96 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-VGA-------TEC--ISPKDSTKPISEVLSEMT   96 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-HTC-------SEE--ECGGGCSSCHHHHHHHHH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-cCC-------cEE--ECccccchHHHHHHHHhc
Confidence            35789999986 9999999999999995 69999999998865544 321       112  233333222222222222


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                       -+++|++|.+.|.
T Consensus        97 -g~G~d~vi~~~g~  109 (176)
T d1d1ta2          97 -GNNVGYTFEVIGH  109 (176)
T ss_dssp             -TSCCCEEEECSCC
T ss_pred             -cccceEEEEeCCc
Confidence             2369999999985

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.41  E-value=0.00024  Score=51.83  Aligned_cols=76  Identities=18%  Similarity=0.298  Sum_probs=54.5

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -.|.+++|.|+ |++|...++.+...|++++++++++++++ ..+++..        . ...|..+.+....       .
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~lGa--------d-~~i~~~~~~~~~~-------~   90 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKALGA--------D-EVVNSRNADEMAA-------H   90 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHTC--------S-EEEETTCHHHHHT-------T
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhccCC--------c-EEEECchhhHHHH-------h
Confidence            46789999986 89999999999999999999998887764 3444431        1 1245555543322       1


Q ss_pred             cCCccEEEeCCCCC
Q 044485           90 YGKLDIMFNNAGTV  103 (257)
Q Consensus        90 ~~~id~lv~~ag~~  103 (257)
                      .+++|++|.+.|..
T Consensus        91 ~~~~D~vid~~g~~  104 (168)
T d1uufa2          91 LKSFDFILNTVAAP  104 (168)
T ss_dssp             TTCEEEEEECCSSC
T ss_pred             cCCCceeeeeeecc
Confidence            24799999999854

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.38  E-value=0.00011  Score=54.22  Aligned_cols=43  Identities=23%  Similarity=0.366  Sum_probs=37.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVC   53 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~   53 (257)
                      .++++||+||+||+|...++-....|++|+.++|++++.+.+.
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~   73 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH
Confidence            3458999999999999999999999999999999988865553

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.35  E-value=0.0002  Score=52.20  Aligned_cols=77  Identities=21%  Similarity=0.296  Sum_probs=52.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++++... ++..       -+++  |..+....   .   ....
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~lGa-------~~~i--~~~~~~~~---~---~~~~   89 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGA-------DHYI--ATLEEGDW---G---EKYF   89 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTC-------SEEE--EGGGTSCH---H---HHSC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-ccCC-------cEEe--eccchHHH---H---Hhhh
Confidence            5789999987 89999999988889999999999988776553 3421       1122  22211111   1   1223


Q ss_pred             CCccEEEeCCCCCC
Q 044485           91 GKLDIMFNNAGTVD  104 (257)
Q Consensus        91 ~~id~lv~~ag~~~  104 (257)
                      +.+|.++.+.+...
T Consensus        90 ~~~d~vi~~~~~~~  103 (168)
T d1piwa2          90 DTFDLIVVCASSLT  103 (168)
T ss_dssp             SCEEEEEECCSCST
T ss_pred             cccceEEEEecCCc
Confidence            57999999987543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.31  E-value=0.00042  Score=50.86  Aligned_cols=80  Identities=19%  Similarity=0.293  Sum_probs=52.9

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC-HHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK-EKDIENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~   87 (257)
                      -.|.+++|.|+ |++|...++.+...|+. |+++++++++++ ..+++..       ..++  |... .+.++...+...
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~-~a~~~Ga-------~~~i--~~~~~~~~~~~~~~~~~   95 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP-KAKALGA-------TDCL--NPRELDKPVQDVITELT   95 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHTTC-------SEEE--CGGGCSSCHHHHHHHHH
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHH-HHHHhCC-------Cccc--CCccchhhhhhhHhhhh
Confidence            46789999975 99999999999999985 788888887754 4444421       1222  2222 122333333322


Q ss_pred             HHcCCccEEEeCCCC
Q 044485           88 TQYGKLDIMFNNAGT  102 (257)
Q Consensus        88 ~~~~~id~lv~~ag~  102 (257)
                        .+++|++|.|+|.
T Consensus        96 --~~G~d~vie~~G~  108 (174)
T d1e3ia2          96 --AGGVDYSLDCAGT  108 (174)
T ss_dssp             --TSCBSEEEESSCC
T ss_pred             --cCCCcEEEEeccc
Confidence              2479999999995

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.30  E-value=0.00054  Score=49.90  Aligned_cols=46  Identities=17%  Similarity=0.309  Sum_probs=40.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIG   57 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~   57 (257)
                      ++|+++|.|+ ||.+++++..|.+.|+ ++.++.|+.++.+++.+...
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~   62 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG   62 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhh
Confidence            5789999988 9999999999999997 59999999988887776653

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.30  E-value=0.0004  Score=45.32  Aligned_cols=75  Identities=15%  Similarity=0.144  Sum_probs=50.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      +++||+++|.|. |..|.++|+.|.++|++|++.+.+....  ..+++..      .+.+...+. +.+.    ++    
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~--~~~~~~~------~~~~~~~~~-~~~~----~~----   63 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPP--GLDKLPE------AVERHTGSL-NDEW----LM----   63 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCT--TGGGSCT------TSCEEESBC-CHHH----HH----
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCch--hHHHHhh------ccceeeccc-chhh----hc----
Confidence            688999999998 7789999999999999999998765421  1122221      133333333 2221    11    


Q ss_pred             HcCCccEEEeCCCCCC
Q 044485           89 QYGKLDIMFNNAGTVD  104 (257)
Q Consensus        89 ~~~~id~lv~~ag~~~  104 (257)
                         .+|.+|...|+..
T Consensus        64 ---~~d~vi~SPGi~~   76 (93)
T d2jfga1          64 ---AADLIVASPGIAL   76 (93)
T ss_dssp             ---HCSEEEECTTSCT
T ss_pred             ---cCCEEEECCCCCC
Confidence               4899999999753

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.26  E-value=0.00038  Score=50.90  Aligned_cols=80  Identities=23%  Similarity=0.309  Sum_probs=52.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC-HHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK-EKDIENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~v~~~~~~~~   87 (257)
                      -.|.+++|.|+ +|+|...++.+...|+. |+.+++++++++ ..+++..       -+++  |..+ .+.+.+.+++..
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~lGa-------~~~i--~~~~~~~~~~~~~~~~~   95 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEFGA-------TECI--NPQDFSKPIQEVLIEMT   95 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHHTC-------SEEE--CGGGCSSCHHHHHHHHT
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHhCC-------cEEE--eCCchhhHHHHHHHHHc
Confidence            36789999998 59999999999999975 676777766654 4455532       1222  2222 233444444332


Q ss_pred             HHcCCccEEEeCCCC
Q 044485           88 TQYGKLDIMFNNAGT  102 (257)
Q Consensus        88 ~~~~~id~lv~~ag~  102 (257)
                        .+++|++|.+.|.
T Consensus        96 --~~g~D~vid~~G~  108 (176)
T d2fzwa2          96 --DGGVDYSFECIGN  108 (176)
T ss_dssp             --TSCBSEEEECSCC
T ss_pred             --CCCCcEeeecCCC
Confidence              2479999999984

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.22  E-value=0.00092  Score=47.64  Aligned_cols=82  Identities=13%  Similarity=0.045  Sum_probs=53.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..=|++.|.|+.|-+|..+|+.|.+.|++|.+.+|+.....+...+-       .++..+.   .....+...+.++...
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~-------~~~v~~~---~~~~~~~~v~~~~~~~   76 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILAN-------ADVVIVS---VPINLTLETIERLKPY   76 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTT-------CSEEEEC---SCGGGHHHHHHHHGGG
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhhh-------ccccccc---cchhhheeeeeccccc
Confidence            33479999999999999999999999999999999876544432211       1133222   3445666666666554


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                      ..+=.+++..+.
T Consensus        77 ~~~~~iiiD~~S   88 (152)
T d2pv7a2          77 LTENMLLADLTS   88 (152)
T ss_dssp             CCTTSEEEECCS
T ss_pred             ccCCceEEEecc
Confidence            332234555544

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.20  E-value=0.00061  Score=49.33  Aligned_cols=77  Identities=21%  Similarity=0.242  Sum_probs=51.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -.|.+++|.|+ |++|...++.+...|++|+++++++++++... ++..       -.+  .|.++.+..+.+.    +.
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~Ga-------~~~--i~~~~~~~~~~~~----~~   90 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KLGA-------SLT--VNARQEDPVEAIQ----RD   90 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTC-------SEE--EETTTSCHHHHHH----HH
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-ccCc-------ccc--ccccchhHHHHHH----Hh
Confidence            35789999886 99999999999999999999999988775543 3321       122  3555555444433    23


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                      .++.|..|.+++
T Consensus        91 ~~g~~~~i~~~~  102 (166)
T d1llua2          91 IGGAHGVLVTAV  102 (166)
T ss_dssp             HSSEEEEEECCS
T ss_pred             hcCCcccccccc
Confidence            345666666655

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.11  E-value=0.00067  Score=50.69  Aligned_cols=80  Identities=14%  Similarity=0.187  Sum_probs=52.5

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .|.+++|.|+ |++|...++.+...|+ .|+++++++++++.+.+ +.        .. +..|-.+. ++.+.+.++...
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-~G--------a~-~~~~~~~~-~~~~~i~~~t~g   92 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-QG--------FE-IADLSLDT-PLHEQIAALLGE   92 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TT--------CE-EEETTSSS-CHHHHHHHHHSS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh-cc--------cc-EEEeCCCc-CHHHHHHHHhCC
Confidence            5789999986 8999888888888887 58888988877655433 31        12 12333343 333333333221


Q ss_pred             cCCccEEEeCCCCC
Q 044485           90 YGKLDIMFNNAGTV  103 (257)
Q Consensus        90 ~~~id~lv~~ag~~  103 (257)
                       .++|++|.+.|..
T Consensus        93 -~g~D~vid~vG~~  105 (195)
T d1kola2          93 -PEVDCAVDAVGFE  105 (195)
T ss_dssp             -SCEEEEEECCCTT
T ss_pred             -CCcEEEEECcccc
Confidence             3699999999853

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.06  E-value=0.00078  Score=49.33  Aligned_cols=80  Identities=16%  Similarity=0.203  Sum_probs=53.7

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHH-HHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEK-DIENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~v~~~~~~~~   87 (257)
                      -.|.+++|.|+ ||+|...++.+...|+ +|+++++++++++...+ +..       .++  .|.++.+ .+.+..... 
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-lGa-------~~~--i~~~~~d~~~~~~~~~~-   93 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LGA-------TEC--LNPKDYDKPIYEVICEK-   93 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-TTC-------SEE--ECGGGCSSCHHHHHHHH-
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-cCC-------cEE--EcCCCchhHHHHHHHHh-
Confidence            46789999986 9999999999999997 58899999888765543 321       122  2333222 123322222 


Q ss_pred             HHcCCccEEEeCCCC
Q 044485           88 TQYGKLDIMFNNAGT  102 (257)
Q Consensus        88 ~~~~~id~lv~~ag~  102 (257)
                       .-+++|++|.++|.
T Consensus        94 -~~~G~d~vid~~g~  107 (174)
T d1p0fa2          94 -TNGGVDYAVECAGR  107 (174)
T ss_dssp             -TTSCBSEEEECSCC
T ss_pred             -cCCCCcEEEEcCCC
Confidence             22479999999984

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.04  E-value=0.0014  Score=46.41  Aligned_cols=78  Identities=15%  Similarity=0.256  Sum_probs=50.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcC--CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHG--AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ++++.|.|+ |.+|..+|..|+.+|  .+|++.+++++..+-...++...............|.   ++           
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~-----------   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD-----------   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG-----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH-----------
Confidence            468888996 999999999999998  4699999998765543333322110011133344442   21           


Q ss_pred             cCCccEEEeCCCCCC
Q 044485           90 YGKLDIMFNNAGTVD  104 (257)
Q Consensus        90 ~~~id~lv~~ag~~~  104 (257)
                      ...-|++|.++|...
T Consensus        70 ~~~adivvitag~~~   84 (146)
T d1ez4a1          70 CKDADLVVITAGAPQ   84 (146)
T ss_dssp             GTTCSEEEECCCC--
T ss_pred             hccccEEEEeccccc
Confidence            136899999999653

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.04  E-value=0.0014  Score=46.67  Aligned_cols=76  Identities=8%  Similarity=0.035  Sum_probs=57.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKL   93 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~i   93 (257)
                      .++|.|. +-+|..+++.|.++|.+|+++..+++...+..++....     .+.++.+|.++++.++++-      ....
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~-----~~~vi~Gd~~d~~~L~~a~------i~~a   72 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD-----NADVIPGDSNDSSVLKKAG------IDRC   72 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT-----TCEEEESCTTSHHHHHHHT------TTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC-----CcEEEEccCcchHHHHHhc------cccC
Confidence            5788887 79999999999999999999998887655555554332     2788999999998766541      1257


Q ss_pred             cEEEeCCC
Q 044485           94 DIMFNNAG  101 (257)
Q Consensus        94 d~lv~~ag  101 (257)
                      |.+|....
T Consensus        73 ~~vi~~~~   80 (153)
T d1id1a_          73 RAILALSD   80 (153)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEccc
Confidence            78877764

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=97.04  E-value=0.00082  Score=49.01  Aligned_cols=78  Identities=17%  Similarity=0.304  Sum_probs=50.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .|.+++|.|+ |++|...++.+...|+. |+.+++++++++.+.+ +..       .+++  |.. .+.++...+...  
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~ga-------~~~i--~~~-~~~~~~~~~~~~--   97 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-LGA-------DHVV--DAR-RDPVKQVMELTR--   97 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-TTC-------SEEE--ETT-SCHHHHHHHHTT--
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-ccc-------ceee--cCc-ccHHHHHHHhhC--
Confidence            5789999886 99999999999888875 6777888776655543 211       1222  332 233433332211  


Q ss_pred             cCCccEEEeCCCC
Q 044485           90 YGKLDIMFNNAGT  102 (257)
Q Consensus        90 ~~~id~lv~~ag~  102 (257)
                      -.++|++|.++|.
T Consensus        98 ~~g~d~vid~~g~  110 (172)
T d1h2ba2          98 GRGVNVAMDFVGS  110 (172)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCceEEEEecCc
Confidence            1259999999994

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.03  E-value=0.0011  Score=47.84  Aligned_cols=84  Identities=11%  Similarity=0.042  Sum_probs=53.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhc--c---C--CCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIG--S---S--SSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~--~---~--~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      ++.|.|. |-+|.++|+.|.+.|++|++.+|+++..++..+.-.  .   .  .-...++.++.+   ..+.++++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence            5777766 999999999999999999999999887766554310  0   0  001122333322   356777888877


Q ss_pred             HHHcCCccEEEeCCC
Q 044485           87 VTQYGKLDIMFNNAG  101 (257)
Q Consensus        87 ~~~~~~id~lv~~ag  101 (257)
                      .+...+=.++++.++
T Consensus        78 ~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGGSCTTCEEEECCS
T ss_pred             hhhcccccceeeccc
Confidence            655443344444443

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.00  E-value=0.0022  Score=43.21  Aligned_cols=40  Identities=28%  Similarity=0.445  Sum_probs=35.2

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      ..+++||++||.|+ |.+|..-++.|.+.|+.|++++....
T Consensus         7 ~l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           7 FCQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             EECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            45899999999998 77999999999999999988876543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.95  E-value=0.0034  Score=44.48  Aligned_cols=44  Identities=23%  Similarity=0.357  Sum_probs=37.1

Q ss_pred             Ccccc-cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc
Q 044485            1 MHANL-MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIK   45 (257)
Q Consensus         1 ~~~~~-~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~   45 (257)
                      |+.++ +..+++||++||+|| |.+|..-++.|.+.|++|++++..
T Consensus         1 ~~~~lpl~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           1 MVKSLQLAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCCCEEEEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             CcccchhheeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            44455 455899999999999 779999999999999999888654

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.84  E-value=0.0052  Score=43.46  Aligned_cols=82  Identities=15%  Similarity=0.206  Sum_probs=53.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccC-CCCCCCceeEecCCCCHHHHHHHHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSS-SSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      .+-.++++.|+|+ |.+|.++|..++.+|.  ++++.+++++.++-...++... ......+.....|   .+.      
T Consensus         2 ~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~~~------   71 (148)
T d1ldna1           2 KNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---YDD------   71 (148)
T ss_dssp             TTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---GGG------
T ss_pred             CCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC---HHH------
Confidence            3455678999997 9999999999999984  5999999887655444444321 1111113333333   221      


Q ss_pred             HHHHHcCCccEEEeCCCCCC
Q 044485           85 TAVTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag~~~  104 (257)
                           ...-|++|.++|...
T Consensus        72 -----l~daDvvvitag~~~   86 (148)
T d1ldna1          72 -----CRDADLVVICAGANQ   86 (148)
T ss_dssp             -----TTTCSEEEECCSCCC
T ss_pred             -----hccceeEEEeccccc
Confidence                 236899999999754

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.0011  Score=49.37  Aligned_cols=44  Identities=25%  Similarity=0.351  Sum_probs=38.7

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhc
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIG   57 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~   57 (257)
                      |++.|.|+ |-+|..+|..|+..|++|++.+++++.+++..+.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            78999998 889999999999999999999999988776665543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.75  E-value=0.0026  Score=46.46  Aligned_cols=88  Identities=11%  Similarity=0.063  Sum_probs=60.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCC------------CCCCceeEecCCCCHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSS------------SASGCSYVHCDVTKEKDIE   80 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~------------~~~~v~~~~~D~~~~~~v~   80 (257)
                      +.|-|.|- |-+|.++|++|++.|++|++.+|++++.+++.++-.....            .......+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            56778887 9999999999999999999999999888776543211000            0011234445566667777


Q ss_pred             HHHHHHHHHcCCccEEEeCCC
Q 044485           81 NAVNTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        81 ~~~~~~~~~~~~id~lv~~ag  101 (257)
                      ...+.+.....+=+++|.+..
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHhccccCcEEEecCc
Confidence            777777666554566666654

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.75  E-value=0.00031  Score=52.19  Aligned_cols=83  Identities=17%  Similarity=0.199  Sum_probs=53.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH-----
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV-----   87 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~-----   87 (257)
                      |++.|.|+ |-+|..+|..|+..|++|++.+++++.+++..+.+....     ...+.-....++..+..+..+.     
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l-----~~~~~~~~~~~~~~~~~~~~i~~~~~~   78 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLL-----VGRVDKGRMTPAKMAEVLNGIRPTLSY   78 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHH-----HHHHTTTSSCHHHHHHHHHHEEEESSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhH-----Hhhhcccccchhhhhhhhceeeccccc
Confidence            57889998 889999999999999999999999988776655543210     0001112224555555554432     


Q ss_pred             HHcCCccEEEeCCC
Q 044485           88 TQYGKLDIMFNNAG  101 (257)
Q Consensus        88 ~~~~~id~lv~~ag  101 (257)
                      +.....|++|-+..
T Consensus        79 ~~~~~adlViEav~   92 (186)
T d1wdka3          79 GDFGNVDLVVEAVV   92 (186)
T ss_dssp             TTGGGCSEEEECCC
T ss_pred             ccccccceeeeeec
Confidence            12234677777654

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.75  E-value=0.0071  Score=43.45  Aligned_cols=92  Identities=21%  Similarity=0.198  Sum_probs=66.2

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ....+++|.|+ |-.|.+-++.....|+.|.+.+.+.+.++++.......      +   ..-.++++.+++.++     
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~------~---~~~~~~~~~l~~~~~-----   94 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR------V---ELLYSNSAEIETAVA-----   94 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG------S---EEEECCHHHHHHHHH-----
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccc------c---eeehhhhhhHHHhhc-----
Confidence            45678999998 88999999999999999999999999888776665321      2   233456666665554     


Q ss_pred             cCCccEEEeCCCCCCCCCCCCCCCCHHHHHH
Q 044485           90 YGKLDIMFNNAGTVDEVKPNILDNDQAEFER  120 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~  120 (257)
                        .-|+||.++-++..  ..-.-.+.+.+..
T Consensus        95 --~aDivI~aalipG~--~aP~lIt~~mv~~  121 (168)
T d1pjca1          95 --EADLLIGAVLVPGR--RAPILVPASLVEQ  121 (168)
T ss_dssp             --TCSEEEECCCCTTS--SCCCCBCHHHHTT
T ss_pred             --cCcEEEEeeecCCc--ccCeeecHHHHhh
Confidence              58999999987664  3333344444333

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.73  E-value=0.0013  Score=47.89  Aligned_cols=79  Identities=18%  Similarity=0.328  Sum_probs=50.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHH-HHHHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKD-IENAVNTAVT   88 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-v~~~~~~~~~   88 (257)
                      .|.+++|.|+ +|+|...+..++..|+ +|+.+++++++++...+ +..       -+++  |..+.+. +++..+... 
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~GA-------d~~i--n~~~~~~~~~~~~~~~~-   95 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-FGA-------TDFV--NPNDHSEPISQVLSKMT-   95 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTC-------CEEE--CGGGCSSCHHHHHHHHH-
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-cCC-------cEEE--cCCCcchhHHHHHHhhc-
Confidence            6788999986 7788888888888887 58888888887755543 321       1222  3333222 223222221 


Q ss_pred             HcCCccEEEeCCCC
Q 044485           89 QYGKLDIMFNNAGT  102 (257)
Q Consensus        89 ~~~~id~lv~~ag~  102 (257)
                       -+++|+++.+.|.
T Consensus        96 -~~G~d~vid~~G~  108 (175)
T d1cdoa2          96 -NGGVDFSLECVGN  108 (175)
T ss_dssp             -TSCBSEEEECSCC
T ss_pred             -cCCcceeeeecCC
Confidence             2479999999994

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.72  E-value=0.0044  Score=44.50  Aligned_cols=43  Identities=26%  Similarity=0.319  Sum_probs=36.3

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK   54 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   54 (257)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++++...+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~   69 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE   69 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh
Confidence            5788999875 999999999999999999999999887765533

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.72  E-value=0.0011  Score=48.60  Aligned_cols=48  Identities=25%  Similarity=0.394  Sum_probs=41.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhc
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIG   57 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~   57 (257)
                      .+++||.+||.|+ ||.+++++..|.+.| +|.++.|+.++.+++.+.+.
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~   61 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIA   61 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHH
Confidence            3689999999987 889999999998777 89999999998888777664

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.66  E-value=0.0016  Score=47.67  Aligned_cols=43  Identities=21%  Similarity=0.178  Sum_probs=38.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKD   55 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~   55 (257)
                      +|++-|.|+ |.+|.++|..|+++|++|++.+|+++..++..+.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            389999998 9999999999999999999999998887776554

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.60  E-value=0.011  Score=39.45  Aligned_cols=72  Identities=13%  Similarity=0.147  Sum_probs=54.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -...++.|.|| |.+|+-++....+.|++|++.+.+++.-..   .+.        -..+..|+.|.+.+.++....   
T Consensus         9 ~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~---~va--------~~~i~~~~~d~~~l~~~~~~~---   73 (111)
T d1kjqa2           9 PAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM---HVA--------HRSHVINMLDGDALRRVVELE---   73 (111)
T ss_dssp             TTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG---GGS--------SEEEECCTTCHHHHHHHHHHH---
T ss_pred             CCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh---hcC--------CeEEECCCCCHHHHHHHHHhh---
Confidence            34567999995 899999999999999999999887653211   110        246778999999998887654   


Q ss_pred             cCCccEEEe
Q 044485           90 YGKLDIMFN   98 (257)
Q Consensus        90 ~~~id~lv~   98 (257)
                        .+|++-.
T Consensus        74 --~~DviT~   80 (111)
T d1kjqa2          74 --KPHYIVP   80 (111)
T ss_dssp             --CCSEEEE
T ss_pred             --CCceEEE
Confidence              5888854

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.59  E-value=0.0011  Score=49.70  Aligned_cols=45  Identities=27%  Similarity=0.423  Sum_probs=38.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVC   53 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~   53 (257)
                      .+++||+++|-| .|.+|..+|+.|.+.|++|++++.+...+....
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~   67 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV   67 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH
Confidence            369999999997 688999999999999999999998877665543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.55  E-value=0.0023  Score=46.43  Aligned_cols=38  Identities=29%  Similarity=0.481  Sum_probs=35.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      ++.||.++|.|-|.=+|+.++..|+++|++|..+..+.
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~   63 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN   63 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccc
Confidence            79999999999999999999999999999998886553

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.32  E-value=0.0078  Score=43.04  Aligned_cols=40  Identities=15%  Similarity=0.126  Sum_probs=34.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHH
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCK   54 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~   54 (257)
                      +|-|.|. |-+|.++|+.|++.|++|++.+|+++..+++.+
T Consensus         2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~   41 (161)
T d1vpda2           2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA   41 (161)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence            4666765 999999999999999999999999887776654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.28  E-value=0.0024  Score=48.70  Aligned_cols=49  Identities=14%  Similarity=0.299  Sum_probs=42.3

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHh
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI   56 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~   56 (257)
                      ..++.||+++|-|- |.+|..+|+.|.+.|+.|+.++.+...++....+.
T Consensus        34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~   82 (230)
T d1leha1          34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE   82 (230)
T ss_dssp             SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence            34689999999875 89999999999999999999998888777766654

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.15  E-value=0.0053  Score=44.11  Aligned_cols=46  Identities=11%  Similarity=0.017  Sum_probs=39.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVC   53 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~   53 (257)
                      .++.||+++|.|-|.-+|+.++..|.++|++|+++......+.+..
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~   78 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHV   78 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHH
Confidence            4789999999999999999999999999999998877666554443

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.09  E-value=0.005  Score=44.52  Aligned_cols=45  Identities=18%  Similarity=0.200  Sum_probs=39.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      .+++||.++|.|-|.-+|+.++..|+++|++|.++......+.+.
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~   79 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEE   79 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHH
Confidence            478999999999999999999999999999999988776655443

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.09  E-value=0.015  Score=41.22  Aligned_cols=79  Identities=11%  Similarity=0.013  Sum_probs=47.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC---------eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGA---------KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~---------~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      .+|.|+||+|.+|.+++..|+..+.         +++...++.+.++....++......  ....+...-.+.+      
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~------   76 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFP--LLAGLEATDDPKV------   76 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT--TEEEEEEESCHHH------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccc--cccccccCCchhh------
Confidence            4899999999999999999998763         2233334444444444444333211  1333333222221      


Q ss_pred             HHHHHHcCCccEEEeCCCCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~  104 (257)
                           .+...|++|..+|...
T Consensus        77 -----~~~~advViitaG~~~   92 (154)
T d1y7ta1          77 -----AFKDADYALLVGAAPR   92 (154)
T ss_dssp             -----HTTTCSEEEECCCCCC
T ss_pred             -----hcccccEEEeecCcCC
Confidence                 2237999999999753

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.05  E-value=0.017  Score=41.47  Aligned_cols=85  Identities=11%  Similarity=0.035  Sum_probs=54.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhcc---------CCCCCCCceeEecCCCCHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGS---------SSSSASGCSYVHCDVTKEKDIEN   81 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~---------~~~~~~~v~~~~~D~~~~~~v~~   81 (257)
                      |+++|.|. |-+|.++|+.|.+.|+  +|+..+|+++.++...+.-..         ......++.++   ..-++.+..
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil---a~p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML---SSPVRTFRE   77 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE---CSCHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc---cCCchhhhh
Confidence            57899985 9999999999999996  588889998877766543210         00001112222   224667888


Q ss_pred             HHHHHHHHcCCccEEEeCCC
Q 044485           82 AVNTAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        82 ~~~~~~~~~~~id~lv~~ag  101 (257)
                      +++++......=.+++..++
T Consensus        78 vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCS
T ss_pred             hhhhhhcccccccccccccc
Confidence            88888776553344554444

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.03  E-value=0.017  Score=40.33  Aligned_cols=77  Identities=14%  Similarity=0.135  Sum_probs=46.3

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           13 KVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      +++.|+|+ |.+|.+++..++.++.  ++++.+++++..+-...++...............   +.+           ..
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~-----------~~   66 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS-----------DV   66 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH-----------Hh
Confidence            35667787 9999999999999984  5999999987665555555432211111222211   222           12


Q ss_pred             CCccEEEeCCCCCC
Q 044485           91 GKLDIMFNNAGTVD  104 (257)
Q Consensus        91 ~~id~lv~~ag~~~  104 (257)
                      ..-|++|..||...
T Consensus        67 ~~adivvitag~~~   80 (142)
T d1y6ja1          67 KDCDVIVVTAGANR   80 (142)
T ss_dssp             TTCSEEEECCCC--
T ss_pred             CCCceEEEeccccc
Confidence            36899999999653

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.01  E-value=0.032  Score=40.26  Aligned_cols=42  Identities=19%  Similarity=0.110  Sum_probs=35.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHh
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI   56 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~   56 (257)
                      ++-|.| .|-+|.++|++|++.|++|++.+|++++.+++.++-
T Consensus         3 kIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~   44 (178)
T d1pgja2           3 DVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN   44 (178)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT
T ss_pred             EEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC
Confidence            355665 599999999999999999999999998888776654

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.98  E-value=0.03  Score=39.16  Aligned_cols=34  Identities=21%  Similarity=0.320  Sum_probs=30.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcch
Q 044485           14 VALITGGARGIGECTARLFSKHGA--KVLIADIKDD   47 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~   47 (257)
                      ++.|+||+|.+|.++|..++.+|.  ++++.++++.
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~   37 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHS   37 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhh
Confidence            689999999999999999999993  6999998753

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.97  E-value=0.0033  Score=45.05  Aligned_cols=37  Identities=14%  Similarity=-0.049  Sum_probs=32.8

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGE   50 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~   50 (257)
                      ++|+|.|+ |.+|..++..|++.|++|.+++|+.+..+
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~   37 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYC   37 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhh
Confidence            37889998 99999999999999999999999876543

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.91  E-value=0.035  Score=40.30  Aligned_cols=86  Identities=19%  Similarity=0.150  Sum_probs=56.3

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHH------------
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEK------------   77 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~------------   77 (257)
                      ...-+++|.|+ |-.|.+-++-....|+.|.+.+.+.+.++++.+...         .++..+..+.+            
T Consensus        27 V~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~---------~~i~~~~~~~~~~~~~~gyA~~~   96 (183)
T d1l7da1          27 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGG---------KFITVDDEAMKTAETAGGYAKEM   96 (183)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTC---------EECCC------------------
T ss_pred             cCCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhc---------ceEEEeccccccccccccchhhc
Confidence            34458999988 889999999999999999999999988777755432         12222211111            


Q ss_pred             ---HHHHHHHHHHHHcCCccEEEeCCCCCCC
Q 044485           78 ---DIENAVNTAVTQYGKLDIMFNNAGTVDE  105 (257)
Q Consensus        78 ---~v~~~~~~~~~~~~~id~lv~~ag~~~~  105 (257)
                         ..+..-+.+.+....-|++|..+-++..
T Consensus        97 s~~~~~~~~~~l~~~l~~aDlVI~talipG~  127 (183)
T d1l7da1          97 GEEFRKKQAEAVLKELVKTDIAITTALIPGK  127 (183)
T ss_dssp             -----CCHHHHHHHHHTTCSEEEECCCCTTS
T ss_pred             CHHHHHHHHHHHHHHHHhhhhheeeeecCCc
Confidence               1112233344444679999999988765

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.90  E-value=0.073  Score=37.73  Aligned_cols=82  Identities=15%  Similarity=0.075  Sum_probs=52.6

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCC-CCCCCceeEecCCCCHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSS-SSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      .++..++.|+|+ |.+|..+|..|+.+|.  ++++.+++++..+-...++.... ...........|   .+        
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d---~~--------   83 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD---YN--------   83 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS---GG--------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc---hh--------
Confidence            355567888896 9999999999999985  59999998876654444443211 111112222222   22        


Q ss_pred             HHHHcCCccEEEeCCCCCCC
Q 044485           86 AVTQYGKLDIMFNNAGTVDE  105 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~~~  105 (257)
                         ....-|++|..||....
T Consensus        84 ---~~~~adivvitag~~~~  100 (159)
T d2ldxa1          84 ---VSANSKLVIITAGARMV  100 (159)
T ss_dssp             ---GGTTEEEEEECCSCCCC
T ss_pred             ---hhccccEEEEecccccC
Confidence               11368999999997543

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.89  E-value=0.021  Score=39.71  Aligned_cols=76  Identities=18%  Similarity=0.196  Sum_probs=48.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           14 VALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      ++.|.|+ |.+|.+++..++.++.  ++++.+++++.++-...++.....-.........|   .+.+           .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~~-----------~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YADL-----------K   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGGG-----------T
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHHh-----------c
Confidence            5677796 8999999999999883  59999998876654444332211101113333322   2221           3


Q ss_pred             CccEEEeCCCCCC
Q 044485           92 KLDIMFNNAGTVD  104 (257)
Q Consensus        92 ~id~lv~~ag~~~  104 (257)
                      .-|++|.++|...
T Consensus        67 ~adivvitag~~~   79 (140)
T d1a5za1          67 GSDVVIVAAGVPQ   79 (140)
T ss_dssp             TCSEEEECCCCCC
T ss_pred             CCCEEEEeccccc
Confidence            6899999999754

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=95.86  E-value=0.0066  Score=43.24  Aligned_cols=43  Identities=21%  Similarity=0.247  Sum_probs=34.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKD   55 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~   55 (257)
                      .+++.|.|+ |.+|..+|..++..+. ++++.+.+++.++-....
T Consensus         7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~D   50 (154)
T d1pzga1           7 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALD   50 (154)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHH
Confidence            478888997 9999999999999884 799999887655444333

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.84  E-value=0.02  Score=38.41  Aligned_cols=36  Identities=25%  Similarity=0.334  Sum_probs=31.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      ..|+++|.|| |.+|..+|..|++.|.+|.++.|.+.
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            3478999987 99999999999999999999988764

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.82  E-value=0.025  Score=41.85  Aligned_cols=39  Identities=28%  Similarity=0.368  Sum_probs=34.8

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      ..++.||++.|.|. |.||+.+++.+...|++|+..++..
T Consensus        40 ~~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          40 GKELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccccceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence            34688999999987 8999999999999999999998754

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.78  E-value=0.045  Score=38.88  Aligned_cols=88  Identities=14%  Similarity=0.120  Sum_probs=53.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCC----CCCceeEecCCCCHHHHHHHHHH---
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSS----ASGCSYVHCDVTKEKDIENAVNT---   85 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~v~~~~~~---   85 (257)
                      ++|-|.|. |-+|.++|++|++.|++|.+.+|+.+..+.+.+.-......    ......+..-+.+.+.++.++..   
T Consensus         2 ~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~   80 (162)
T d3cuma2           2 KQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG   80 (162)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTC
T ss_pred             CEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhcccc
Confidence            45777755 99999999999999999999999987766554332110000    01133444445666666666543   


Q ss_pred             HHHHcCCccEEEeCCC
Q 044485           86 AVTQYGKLDIMFNNAG  101 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag  101 (257)
                      +.....+=+++|.+..
T Consensus        81 ~~~~l~~g~iiid~st   96 (162)
T d3cuma2          81 LLAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHHSCTTCEEEECSC
T ss_pred             ccccCCCCCEEEECCC
Confidence            3333333345665554

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.77  E-value=0.021  Score=38.67  Aligned_cols=36  Identities=25%  Similarity=0.256  Sum_probs=32.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      .+|+++|.|| |.+|..+|..|+++|.+|.++.+.+.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            3578988887 99999999999999999999988764

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.67  E-value=0.03  Score=39.18  Aligned_cols=77  Identities=17%  Similarity=0.266  Sum_probs=47.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           14 VALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      ++.|+||+|.+|.++|..|+.+|.  ++++.+.++.+.+.  ..+.....    ......-+ ...+..+.+       .
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~~~----~~~~~~~~-~~~~~~~~~-------~   67 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHIET----RATVKGYL-GPEQLPDCL-------K   67 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTSSS----SCEEEEEE-SGGGHHHHH-------T
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhhhh----hcCCCeEE-cCCChHHHh-------C
Confidence            688999999999999999999985  38889887643322  23321110    11111112 222222222       3


Q ss_pred             CccEEEeCCCCCC
Q 044485           92 KLDIMFNNAGTVD  104 (257)
Q Consensus        92 ~id~lv~~ag~~~  104 (257)
                      .-|++|..+|...
T Consensus        68 ~aDivVitag~~~   80 (144)
T d1mlda1          68 GCDVVVIPAGVPR   80 (144)
T ss_dssp             TCSEEEECCSCCC
T ss_pred             CCCEEEECCCcCC
Confidence            6999999999753

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.62  E-value=0.012  Score=40.02  Aligned_cols=35  Identities=29%  Similarity=0.422  Sum_probs=31.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      .|+++|.|| |.||..+|..|++.|.+|.++.|.+.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            478999987 89999999999999999999987653

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=95.62  E-value=0.11  Score=37.42  Aligned_cols=80  Identities=10%  Similarity=-0.020  Sum_probs=47.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcC---C----eEEEeeCcch--hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHH
Q 044485           12 GKVALITGGARGIGECTARLFSKHG---A----KVLIADIKDD--LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENA   82 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g---~----~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~   82 (257)
                      .-+|.||||+|.||.+++..|++..   .    .+.+.+....  .++...-++.......  ...+.. -++..     
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~--~~~~~~-~~~~~-----   95 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPL--LREVSI-GIDPY-----   95 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--EEEEEE-ESCHH-----
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccccc--ccCccc-cccch-----
Confidence            3479999999999999999999853   2    3555555442  3344443443332211  222221 12221     


Q ss_pred             HHHHHHHcCCccEEEeCCCCCC
Q 044485           83 VNTAVTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        83 ~~~~~~~~~~id~lv~~ag~~~  104 (257)
                           +.+...|++|..+|...
T Consensus        96 -----~~~~~aDvVvi~ag~~r  112 (175)
T d7mdha1          96 -----EVFEDVDWALLIGAKPR  112 (175)
T ss_dssp             -----HHTTTCSEEEECCCCCC
T ss_pred             -----hhccCCceEEEeeccCC
Confidence                 22347999999999753

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.61  E-value=0.0074  Score=41.40  Aligned_cols=70  Identities=21%  Similarity=0.302  Sum_probs=49.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      |.++|.|. |.+|..+++.|.  |..|+++..+++..+...+.         .+.++.+|.++++.++++-      ...
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~---------~~~~i~Gd~~~~~~L~~a~------i~~   62 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLRS---------GANFVHGDPTRVSDLEKAN------VRG   62 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHT---------TCEEEESCTTSHHHHHHTT------CTT
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhc---------CccccccccCCHHHHHHhh------hhc
Confidence            46788886 889999999994  55677777777665544321         2788999999998776631      125


Q ss_pred             ccEEEeCC
Q 044485           93 LDIMFNNA  100 (257)
Q Consensus        93 id~lv~~a  100 (257)
                      .+.+|.+.
T Consensus        63 A~~vi~~~   70 (129)
T d2fy8a1          63 ARAVIVNL   70 (129)
T ss_dssp             CSEEEECC
T ss_pred             CcEEEEec
Confidence            67777654

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.59  E-value=0.017  Score=42.82  Aligned_cols=39  Identities=28%  Similarity=0.450  Sum_probs=34.7

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      ..+.||++.|.|- |.||+.+|+.+...|++|+..++...
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            4688999999987 99999999999999999999887643

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.58  E-value=0.018  Score=40.64  Aligned_cols=42  Identities=7%  Similarity=0.151  Sum_probs=35.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHh
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDI   56 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~   56 (257)
                      ++.|.| +|-+|.++++.|.+.|.++++..|+.++.+++.++.
T Consensus         2 kIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           2 KIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            456665 499999999999999999999999988888777665

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=95.53  E-value=0.021  Score=40.08  Aligned_cols=77  Identities=13%  Similarity=0.167  Sum_probs=49.6

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccC-CCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSS-SSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      |++.|+|+ |.+|.++|..|+.+|.  ++++.++++++++....++... ............   |.+.+          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~---d~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DWAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CGGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceecc---CHHHh----------
Confidence            67888895 9999999999999984  5999999887654433333221 111111232322   33221          


Q ss_pred             cCCccEEEeCCCCCC
Q 044485           90 YGKLDIMFNNAGTVD  104 (257)
Q Consensus        90 ~~~id~lv~~ag~~~  104 (257)
                       ..-|++|.+||...
T Consensus        68 -~~adiVVitaG~~~   81 (146)
T d1hyha1          68 -ADADVVISTLGNIK   81 (146)
T ss_dssp             -TTCSEEEECCSCGG
T ss_pred             -ccccEEEEeccccc
Confidence             26899999999653

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.51  E-value=0.023  Score=38.10  Aligned_cols=34  Identities=21%  Similarity=0.247  Sum_probs=30.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      |+++|.|| |.+|..+|..|++.|.+|.++.|.+.
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            67888887 99999999999999999999988764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.49  E-value=0.012  Score=40.04  Aligned_cols=35  Identities=23%  Similarity=0.191  Sum_probs=31.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      .|+++|.|| |.+|..+|..|++.|.+|.++.|.+.
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            378999988 78999999999999999999988753

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.48  E-value=0.012  Score=40.32  Aligned_cols=73  Identities=14%  Similarity=0.297  Sum_probs=53.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEE-eeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLI-ADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~-~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      ++.|.|++|-.|+++++.+.++|..++. .+++...      .+.     ..+   +..|+|.++.+.+.++...+.  +
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~~-----~~D---VvIDFS~p~~~~~~l~~~~~~--~   65 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------ELD-----SPD---VVIDFSSPEALPKTVDLCKKY--R   65 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------ECS-----CCS---EEEECSCGGGHHHHHHHHHHH--T
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------Hhc-----cCC---EEEEecCHHHHHHHHHHHHhc--C
Confidence            6899999999999999999999998654 3433211      111     112   357999999999999888766  4


Q ss_pred             ccEEEeCCCC
Q 044485           93 LDIMFNNAGT  102 (257)
Q Consensus        93 id~lv~~ag~  102 (257)
                      +-+|+-..|.
T Consensus        66 ~p~ViGTTG~   75 (128)
T d1vm6a3          66 AGLVLGTTAL   75 (128)
T ss_dssp             CEEEECCCSC
T ss_pred             CCEEEEcCCC
Confidence            5577766664

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.46  E-value=0.019  Score=41.94  Aligned_cols=37  Identities=22%  Similarity=0.254  Sum_probs=33.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      .+.||++.|.|. |.||+.+++.+...|++|+..+|+.
T Consensus        39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          39 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccCceEEEecc-ccccccceeeeeccccccccccccc
Confidence            588999999998 6699999999999999999998875

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.45  E-value=0.041  Score=37.18  Aligned_cols=36  Identities=33%  Similarity=0.407  Sum_probs=31.7

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      -.+|+++|.|| |.+|..+|..|++.|.+|.++.+.+
T Consensus        28 ~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            35678999877 8999999999999999999998765

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.37  E-value=0.017  Score=41.28  Aligned_cols=39  Identities=31%  Similarity=0.502  Sum_probs=35.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      ..+.||+++|.|- |-+|+.+|+++...|++|+++..++-
T Consensus        20 ~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~   58 (163)
T d1li4a1          20 VMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPI   58 (163)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             ceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccc
Confidence            4589999999986 79999999999999999999998874

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.28  E-value=0.023  Score=38.23  Aligned_cols=34  Identities=18%  Similarity=0.096  Sum_probs=30.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      .|+++|.|| |.+|..+|..|++.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            478999987 8999999999999999999998875

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.28  E-value=0.015  Score=40.98  Aligned_cols=42  Identities=21%  Similarity=0.332  Sum_probs=36.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC-CeEEEeeCcchhhHhHHHHh
Q 044485           14 VALITGGARGIGECTARLFSKHG-AKVLIADIKDDLGESVCKDI   56 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g-~~Vi~~~r~~~~~~~~~~~~   56 (257)
                      ++.+.|+ |-+|.++++.|.+.| .+|++.+|+++..+++.++.
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            5777777 999999999999887 88999999998888877764

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.24  E-value=0.097  Score=36.43  Aligned_cols=77  Identities=19%  Similarity=0.266  Sum_probs=46.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-C--CeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           14 VALITGGARGIGECTARLFSKH-G--AKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~-g--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ++.|+|++|.+|.++|..|+.+ +  .++++.+..+ ..+-...++..... ..... ....-.+.+.+           
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~-~~~~~-~~~~~~~~~~~-----------   67 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPT-AVKIK-GFSGEDATPAL-----------   67 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCS-SCEEE-EECSSCCHHHH-----------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCcc-ccCCc-EEEcCCCcccc-----------
Confidence            6889999999999999998754 4  5689998764 33322233332211 11111 12223333221           


Q ss_pred             CCccEEEeCCCCCC
Q 044485           91 GKLDIMFNNAGTVD  104 (257)
Q Consensus        91 ~~id~lv~~ag~~~  104 (257)
                      ..-|++|..+|...
T Consensus        68 ~~aDvvvitaG~~~   81 (145)
T d2cmda1          68 EGADVVLISAGVRR   81 (145)
T ss_dssp             TTCSEEEECCSCCC
T ss_pred             CCCCEEEECCCccC
Confidence            25899999999754

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.20  E-value=0.04  Score=37.20  Aligned_cols=33  Identities=15%  Similarity=0.122  Sum_probs=29.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIK   45 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~   45 (257)
                      .+.++|.|| |-||..+|..|.+.|.+|.++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            367888887 999999999999999999998775

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.14  E-value=0.019  Score=39.02  Aligned_cols=35  Identities=17%  Similarity=0.350  Sum_probs=31.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      .|.++|.|| |-||..+|..|.+.|.+|.++.|.+.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            478999987 99999999999999999999988764

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.13  E-value=0.037  Score=40.12  Aligned_cols=33  Identities=21%  Similarity=0.288  Sum_probs=29.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      +|.|.|+ |..|.++|..|++.|.+|.+.+|..+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            6778887 99999999999999999999998644

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.12  E-value=0.015  Score=44.18  Aligned_cols=34  Identities=24%  Similarity=0.276  Sum_probs=30.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      .|+|+|.|| |-.|.+.|.+|+++|++|.++.|+.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            367999987 8999999999999999999999864

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.11  E-value=0.034  Score=38.20  Aligned_cols=36  Identities=22%  Similarity=0.194  Sum_probs=32.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      .+|+++|.|| |.+|..+|..|++.|.+|.++.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            4688999987 99999999999999999999987764

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.02  E-value=0.029  Score=41.34  Aligned_cols=39  Identities=26%  Similarity=0.251  Sum_probs=34.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      ..+.||++.|.|. |.||+.+|+.+...|++|+..++...
T Consensus        45 ~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          45 ARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            4689999999986 99999999999999999999887644

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.97  E-value=0.028  Score=41.01  Aligned_cols=41  Identities=24%  Similarity=0.191  Sum_probs=35.2

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL   48 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   48 (257)
                      ...+.+|++.|.|. |.||+.+++.+...|++|+..++....
T Consensus        39 ~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          39 GTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            34688999999985 999999999999999999999876543

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=94.95  E-value=0.05  Score=37.84  Aligned_cols=75  Identities=19%  Similarity=0.199  Sum_probs=46.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcc--hhhHhHHHHhcc--CCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           14 VALITGGARGIGECTARLFSKHGA--KVLIADIKD--DLGESVCKDIGS--SSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~--~~~~~~~~~~~~--~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++.|+|++|.+|.++|..++.++.  ++++.+.+.  +..+-...++..  ....  .......|   .+.         
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~--~~~i~~~~---~~~---------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDS--NTRVRQGG---YED---------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTC--CCEEEECC---GGG---------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccC--CceEeeCC---HHH---------
Confidence            688999999999999999999984  488888543  222222222221  1111  13333333   321         


Q ss_pred             HHcCCccEEEeCCCCCC
Q 044485           88 TQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~  104 (257)
                        ...-|++|..||...
T Consensus        68 --~~~aDiVvitaG~~~   82 (142)
T d1o6za1          68 --TAGSDVVVITAGIPR   82 (142)
T ss_dssp             --GTTCSEEEECCCCCC
T ss_pred             --hhhcCEEEEeccccc
Confidence              136999999999653

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.91  E-value=0.1  Score=37.94  Aligned_cols=39  Identities=28%  Similarity=0.212  Sum_probs=34.4

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      ..++.++++.|.|. |.||+.+++.+...|++|+..++..
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          39 SFEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccccceEEEEeec-ccchhhhhhhcccccceEeeccccc
Confidence            34688999999965 9999999999999999999998764

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.87  E-value=0.015  Score=42.78  Aligned_cols=42  Identities=19%  Similarity=0.260  Sum_probs=35.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKD   55 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~   55 (257)
                      +++.|.|+ |..|.++|..|++.|.+|.+.+|+++..+...+.
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc
Confidence            46889987 7899999999999999999999998777666544

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=94.85  E-value=0.11  Score=36.79  Aligned_cols=80  Identities=13%  Similarity=0.068  Sum_probs=51.8

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCC-CCCCCceeEecCCCCHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSS-SSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      +.++++.|.|+ |.+|.++|..++.+|.  ++++.+++++..+-...++.... ...........   +.+.        
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~---d~~~--------   85 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADK---DYSV--------   85 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECS---SGGG--------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEecc---chhh--------
Confidence            55678889996 9999999999999995  59999998776544443342211 00111222222   2222        


Q ss_pred             HHHcCCccEEEeCCCCCC
Q 044485           87 VTQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~~~  104 (257)
                         ...-|++|..||...
T Consensus        86 ---~~~adiVVitAg~~~  100 (160)
T d1i0za1          86 ---TANSKIVVVTAGVRQ  100 (160)
T ss_dssp             ---GTTCSEEEECCSCCC
T ss_pred             ---cccccEEEEecCCcc
Confidence               136899999999754

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.81  E-value=0.02  Score=43.82  Aligned_cols=78  Identities=15%  Similarity=0.190  Sum_probs=49.4

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ++++++|+|.|+ ||+|..++..|++.|.. +++++.+.=....+...          +.+-.-|+..+ -++.+.+.+.
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ----------~l~~~~diG~~-K~~~a~~~l~   94 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQ----------TLHSDATVGQP-KVESARDALT   94 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTC----------TTCCGGGTTSB-HHHHHHHHHH
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhh----------ccccHhhcCch-HHHHHHHHHH
Confidence            477899999996 99999999999999985 88888765333332211          22223355433 3455555565


Q ss_pred             HHcCCccEEEe
Q 044485           88 TQYGKLDIMFN   98 (257)
Q Consensus        88 ~~~~~id~lv~   98 (257)
                      +..+.+.+..+
T Consensus        95 ~~np~~~i~~~  105 (247)
T d1jw9b_          95 RINPHIAITPV  105 (247)
T ss_dssp             HHCTTSEEEEE
T ss_pred             Hhhcccchhhh
Confidence            55444444433

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.80  E-value=0.07  Score=35.72  Aligned_cols=35  Identities=20%  Similarity=0.252  Sum_probs=31.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      .++++|.|| |.||..+|..|++.|.+|.++.|...
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            478999987 99999999999999999999887653

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.75  E-value=0.16  Score=32.47  Aligned_cols=73  Identities=15%  Similarity=0.181  Sum_probs=46.6

Q ss_pred             CCcEEEEecCCCchH-HHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGGARGIG-ECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGas~giG-~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +.|++.+.|- +|+| .++|+.|.++|+.|...++.....-+..++   .+     +.+...+-  ++.+          
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~---~G-----i~v~~g~~--~~~i----------   65 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ---AG-----AKIYIGHA--EEHI----------   65 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH---TT-----CEEEESCC--GGGG----------
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH---CC-----CeEEECCc--cccC----------
Confidence            4578888876 6667 667999999999999999875432222222   22     33333222  2212          


Q ss_pred             cCCccEEEeCCCCCCC
Q 044485           90 YGKLDIMFNNAGTVDE  105 (257)
Q Consensus        90 ~~~id~lv~~ag~~~~  105 (257)
                       ...|.+|...++...
T Consensus        66 -~~~d~vV~S~AI~~~   80 (96)
T d1p3da1          66 -EGASVVVVSSAIKDD   80 (96)
T ss_dssp             -TTCSEEEECTTSCTT
T ss_pred             -CCCCEEEECCCcCCC
Confidence             258999999987643

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.69  E-value=0.037  Score=40.05  Aligned_cols=65  Identities=17%  Similarity=0.175  Sum_probs=49.0

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCC----------CCCCceeEecCCCCHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSS----------SASGCSYVHCDVTKEK   77 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~----------~~~~v~~~~~D~~~~~   77 (257)
                      ..+++||..|++.|   ..+..|+++|++|+.++.++..++.+.+..+....          ....+.++.+|..+..
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~   93 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT   93 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc
Confidence            46789999999877   37779999999999999999999888777654211          1123567777777654

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.68  E-value=0.035  Score=40.98  Aligned_cols=73  Identities=27%  Similarity=0.313  Sum_probs=54.2

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ..++.||+||=.|+++|+   ++..++..|+. |+.++.+++.++.+.+.+.       .+.++.+|+.+.         
T Consensus        44 ~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~~-------~~~~~~~D~~~l---------  104 (197)
T d1ne2a_          44 DGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNCG-------GVNFMVADVSEI---------  104 (197)
T ss_dssp             HTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-------TSEEEECCGGGC---------
T ss_pred             cCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHccc-------cccEEEEehhhc---------
Confidence            457899999999998873   34457778865 9999999887766555442       378888998543         


Q ss_pred             HHHHcCCccEEEeCCCC
Q 044485           86 AVTQYGKLDIMFNNAGT  102 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~  102 (257)
                          .+++|+||.|...
T Consensus       105 ----~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 ----SGKYDTWIMNPPF  117 (197)
T ss_dssp             ----CCCEEEEEECCCC
T ss_pred             ----CCcceEEEeCccc
Confidence                2579999999764

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.65  E-value=0.077  Score=35.21  Aligned_cols=34  Identities=24%  Similarity=0.381  Sum_probs=30.3

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      .|+++|.|| |.+|..+|..|++.|.+|.++.|.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            478888877 9999999999999999999998765

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.58  E-value=0.1  Score=35.80  Aligned_cols=76  Identities=12%  Similarity=0.128  Sum_probs=51.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-CCeEE-EeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           14 VALITGGARGIGECTARLFSKH-GAKVL-IADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~-g~~Vi-~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      ++.|.|++|-+|+.+++...+. ++.++ .+++... +.....    .   ..+   +..|+|.++.+...++...+.  
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~~~~----~---~~D---vvIDFS~p~~~~~~~~~~~~~--   67 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSLLTD----G---NTE---VVIDFTHPDVVMGNLEFLIDN--   67 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THHHHT----T---TCS---EEEECCCTTTHHHHHHHHHHT--
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhhhcc----c---cCC---EEEEcccHHHHHHHHHHHHhc--
Confidence            5789999999999999987664 67754 3444332 221111    1   111   458999999999999888765  


Q ss_pred             CccEEEeCCCC
Q 044485           92 KLDIMFNNAGT  102 (257)
Q Consensus        92 ~id~lv~~ag~  102 (257)
                      ++-+|+-..|.
T Consensus        68 ~~~~ViGTTG~   78 (135)
T d1yl7a1          68 GIHAVVGTTGF   78 (135)
T ss_dssp             TCEEEECCCCC
T ss_pred             CCCEEEecccc
Confidence            46677755553

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.48  E-value=0.075  Score=37.36  Aligned_cols=80  Identities=16%  Similarity=0.157  Sum_probs=45.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-------eEEEeeCcch--hhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485           13 KVALITGGARGIGECTARLFSKHGA-------KVLIADIKDD--LGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~-------~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      .++.|+||+|.+|.+++..|++.+.       .+++.+.++.  .++....++.......  ...+..- ++.+      
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~-~~~~------   74 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL--LKDVIAT-DKEE------   74 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT--EEEEEEE-SCHH------
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccc--ccccccC-cccc------
Confidence            5899999999999999999987652       3555554432  3333333332221111  2222221 1111      


Q ss_pred             HHHHHHcCCccEEEeCCCCCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGTVDE  105 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~~~~  105 (257)
                          +.+...|++|..+|....
T Consensus        75 ----~~~~~~dvVVitag~~~~   92 (154)
T d5mdha1          75 ----IAFKDLDVAILVGSMPRR   92 (154)
T ss_dssp             ----HHTTTCSEEEECCSCCCC
T ss_pred             ----cccCCceEEEEecccCCC
Confidence                112369999999997653

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.44  E-value=0.064  Score=42.04  Aligned_cols=25  Identities=24%  Similarity=0.195  Sum_probs=22.0

Q ss_pred             CCchHHHHHHHHHHcCCeEEEeeCc
Q 044485           21 ARGIGECTARLFSKHGAKVLIADIK   45 (257)
Q Consensus        21 s~giG~~ia~~l~~~g~~Vi~~~r~   45 (257)
                      ||..|.++|+.|..+|+.|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            4678999999999999999988654

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.35  E-value=0.062  Score=39.37  Aligned_cols=40  Identities=20%  Similarity=0.133  Sum_probs=35.2

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      ..++.||++.|.|. |.||+.+++.+...|++|+..++...
T Consensus        42 ~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          42 GEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             cceecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            45678999999987 99999999999999999999887654

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=94.23  E-value=0.2  Score=34.62  Aligned_cols=42  Identities=19%  Similarity=0.324  Sum_probs=32.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHh
Q 044485           14 VALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDI   56 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~   56 (257)
                      ++.|+|+ |.+|.++|..++.+|.  ++++.+++++..+-...++
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl   46 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDM   46 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHH
Confidence            5667797 9999999999999985  5999999887654433333

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.06  E-value=0.035  Score=37.45  Aligned_cols=34  Identities=26%  Similarity=0.230  Sum_probs=30.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      +|.++|.|| |.+|..+|..|++.|.+|.++.|.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            478888887 9999999999999999999998765

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.95  E-value=0.2  Score=34.44  Aligned_cols=87  Identities=14%  Similarity=0.094  Sum_probs=59.9

Q ss_pred             CCcEEEEecCC---CchHHHHHHHHHHcCCeEEEeeCcchhhH--hHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485           11 QGKVALITGGA---RGIGECTARLFSKHGAKVLIADIKDDLGE--SVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus        11 ~~k~~lItGas---~giG~~ia~~l~~~g~~Vi~~~r~~~~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      +.|++.|.|+|   +..|..+++.|.+.|++|+.+..+.....  .+...+.+....   +..+.. +..++.+..++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~---iD~v~i-~vp~~~~~~~~~e   93 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDK---IEVVDL-FVKPKLTMEYVEQ   93 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSC---CSEEEE-CSCHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCcc---ceEEEE-EeCHHHHHHHHHH
Confidence            56899999999   67999999999999999999876543221  222223332211   333222 3468888899998


Q ss_pred             HHHHcCCccEEEeCCCCC
Q 044485           86 AVTQYGKLDIMFNNAGTV  103 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~  103 (257)
                      +.+.  ++..++...|..
T Consensus        94 ~~~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          94 AIKK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HHHH--TCSEEEECTTCC
T ss_pred             HHHh--CCCEEEEecccc
Confidence            8876  477888877754

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.86  E-value=0.058  Score=36.07  Aligned_cols=37  Identities=14%  Similarity=0.270  Sum_probs=32.5

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      ..+|.++|.|+ |-+|..+|..|++.|..|.++.|.+.
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            45789999987 99999999999999999999988753

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.69  E-value=0.034  Score=46.19  Aligned_cols=36  Identities=19%  Similarity=0.355  Sum_probs=31.0

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKD   46 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   46 (257)
                      +++.+|||.|+ ||+|..+++.|+..|.. +.+++.+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            56778999999 88999999999999985 88887643

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.56  E-value=0.24  Score=36.91  Aligned_cols=44  Identities=11%  Similarity=0.149  Sum_probs=37.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIG   57 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~   57 (257)
                      .+++||..|++.|   ..+..|+++|++|+.++-++..++.+.++..
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~   88 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQN   88 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhh
Confidence            6789999999877   4588999999999999999988877766543

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=93.52  E-value=0.33  Score=32.07  Aligned_cols=82  Identities=15%  Similarity=0.107  Sum_probs=54.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      ||++||.--..-+-..+...|.+.|+.|+....+....-+..++.   .   .++..+..++-+.+ --++++++++...
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~---~---~dliilD~~mp~~~-G~e~~~~ir~~~~   73 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKEL---K---PDIVTMDITMPEMN-GIDAIKEIMKIDP   73 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C---CSEEEEECSCGGGC-HHHHHHHHHHHCT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhc---c---CCEEEEecCCCCCC-HHHHHHHHHHhCC
Confidence            789999999999999999999999999886655543322222222   1   12444544444443 4456777877776


Q ss_pred             CccEEEeCC
Q 044485           92 KLDIMFNNA  100 (257)
Q Consensus        92 ~id~lv~~a  100 (257)
                      .+-+++..+
T Consensus        74 ~~pvi~ls~   82 (118)
T d1u0sy_          74 NAKIIVCSA   82 (118)
T ss_dssp             TCCEEEEEC
T ss_pred             CCcEEEEEc
Confidence            677776653

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.48  E-value=0.038  Score=42.56  Aligned_cols=34  Identities=21%  Similarity=0.255  Sum_probs=29.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      +|+|+|.|| |--|...|.+|++.|++|+++.++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            588999987 7889999999999999999997653

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.36  E-value=0.14  Score=34.64  Aligned_cols=82  Identities=13%  Similarity=0.132  Sum_probs=55.2

Q ss_pred             cccccCCcEEEEecCCC----------chHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC
Q 044485            6 MLRRLQGKVALITGGAR----------GIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK   75 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~----------giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~   75 (257)
                      |..+-..|++||.|++.          --+.+.+++|.+.|+.++++..+++...-.....       .++.   .+--.
T Consensus         1 mp~~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~a-------D~lY---fePlt   70 (127)
T d1a9xa3           1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMA-------DATY---IEPIH   70 (127)
T ss_dssp             CCCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGS-------SEEE---CSCCC
T ss_pred             CCCCCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhhc-------ceee---eecCC
Confidence            34455668999999852          3467889999999999999988886543222211       1122   33335


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCCC
Q 044485           76 EKDIENAVNTAVTQYGKLDIMFNNAGT  102 (257)
Q Consensus        76 ~~~v~~~~~~~~~~~~~id~lv~~ag~  102 (257)
                      .+++.+++++-     ++|.++-..|.
T Consensus        71 ~e~v~~Ii~~E-----~pd~il~~~GG   92 (127)
T d1a9xa3          71 WEVVRKIIEKE-----RPDAVLPTMGG   92 (127)
T ss_dssp             HHHHHHHHHHH-----CCSEEECSSSH
T ss_pred             HHHHHHHHHHh-----CcCCeEEEeee
Confidence            77887777652     79999988774

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.34  E-value=0.037  Score=40.12  Aligned_cols=35  Identities=11%  Similarity=0.163  Sum_probs=30.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcch
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAK-VLIADIKDD   47 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~   47 (257)
                      +|+|+|.|| |-.|...|..|+++|+. |+++.|...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            588999998 89999999999999995 988887653

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.25  E-value=0.62  Score=33.93  Aligned_cols=78  Identities=19%  Similarity=0.256  Sum_probs=54.9

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNT   85 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~   85 (257)
                      ..+++|+++|=-|++.|.   ++..++.+|+ .|+.++.++..++.+.+.+....   .+..++..|..+.         
T Consensus        42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~---~~~~~~~~d~~~~---------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFK---GKFKVFIGDVSEF---------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGT---TSEEEEESCGGGC---------
T ss_pred             cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcC---CCceEEECchhhh---------
Confidence            346899999988887662   3334556786 69999999888777766655432   3467777776432         


Q ss_pred             HHHHcCCccEEEeCCCCC
Q 044485           86 AVTQYGKLDIMFNNAGTV  103 (257)
Q Consensus        86 ~~~~~~~id~lv~~ag~~  103 (257)
                          .+++|+||.|..+.
T Consensus       107 ----~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 ----NSRVDIVIMNPPFG  120 (201)
T ss_dssp             ----CCCCSEEEECCCCS
T ss_pred             ----CCcCcEEEEcCccc
Confidence                25799999998653

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.23  E-value=0.084  Score=37.38  Aligned_cols=38  Identities=29%  Similarity=0.443  Sum_probs=34.8

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      -+.||+++|.|= |-+|+.+|++|...|++|+++..++-
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi   57 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPI   57 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCch
Confidence            478999999986 89999999999999999999988874

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.12  E-value=0.29  Score=30.79  Aligned_cols=71  Identities=14%  Similarity=0.108  Sum_probs=44.9

Q ss_pred             cEEEEecCCCchHH-HHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARGIGE-CTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~giG~-~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +++-+.|- +|+|. ++|+.|.++|+.|...++......+   .++..+     +.++..  -+++.+           .
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~---~L~~~G-----i~i~~g--h~~~~i-----------~   59 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTA---YLRKLG-----IPIFVP--HSADNW-----------Y   59 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HHHHTT-----CCEESS--CCTTSC-----------C
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHH---HHHHCC-----CeEEee--eccccc-----------C
Confidence            45666655 77887 7899999999999999988643222   233322     333222  122211           3


Q ss_pred             CccEEEeCCCCCCC
Q 044485           92 KLDIMFNNAGTVDE  105 (257)
Q Consensus        92 ~id~lv~~ag~~~~  105 (257)
                      .+|.||...++...
T Consensus        60 ~~d~vV~SsAI~~~   73 (89)
T d1j6ua1          60 DPDLVIKTPAVRDD   73 (89)
T ss_dssp             CCSEEEECTTCCTT
T ss_pred             CCCEEEEecCcCCC
Confidence            68999999997643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.04  E-value=0.079  Score=39.78  Aligned_cols=38  Identities=24%  Similarity=0.351  Sum_probs=33.0

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      ..-+.|+++|.|| |..|...|..|+++|++|+++.++.
T Consensus        45 ~~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          45 QTKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CCSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            3457799999998 7889999999999999999998754

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=93.02  E-value=0.11  Score=36.00  Aligned_cols=77  Identities=16%  Similarity=0.203  Sum_probs=48.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhHHHHhccCCC-CCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           14 VALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESVCKDIGSSSS-SASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      ++.|+|+ |.+|.+++..++..|.  ++++.+.+++.++.....+..... ......+...  .+.+.           .
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence            5777896 9999999999999983  699999988765544333322100 0011222222  22322           1


Q ss_pred             CCccEEEeCCCCCC
Q 044485           91 GKLDIMFNNAGTVD  104 (257)
Q Consensus        91 ~~id~lv~~ag~~~  104 (257)
                      ...|++|.++|...
T Consensus        68 ~dadvvvitag~~~   81 (142)
T d1guza1          68 ANSDIVIITAGLPR   81 (142)
T ss_dssp             TTCSEEEECCSCCC
T ss_pred             cCCeEEEEEEecCC
Confidence            36899999999754

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.01  E-value=0.097  Score=38.11  Aligned_cols=39  Identities=13%  Similarity=0.077  Sum_probs=34.7

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      ..++.++++.|.|. |.||+++++.+...|.+|+..+|..
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeecc
Confidence            34688999999986 8999999999999999999998864

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.97  E-value=0.065  Score=38.80  Aligned_cols=38  Identities=21%  Similarity=0.211  Sum_probs=33.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      ..+.|+++|.|| |.-|.+.|..|+++|++|++..+...
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            356789999998 88999999999999999999988764

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.84  E-value=0.08  Score=38.98  Aligned_cols=39  Identities=21%  Similarity=0.201  Sum_probs=32.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHH
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVC   53 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~   53 (257)
                      ++.|.| .|-+|..+|..|+++|++|++.+.+++..+++.
T Consensus         2 kI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           2 RISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            466675 599999999999999999999998876655553

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.74  E-value=0.29  Score=34.10  Aligned_cols=85  Identities=6%  Similarity=0.039  Sum_probs=53.6

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccC---CCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSS---SSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~---~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      |-+.|- |-+|.++|++|.+.|..| ...|+.++.++..++....   .....+...+...+.+.+.+....+.+.+...
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            556666 999999999999888865 4677777666665554321   11111233344456667777777777766554


Q ss_pred             CccEEEeCCC
Q 044485           92 KLDIMFNNAG  101 (257)
Q Consensus        92 ~id~lv~~ag  101 (257)
                      +-.++|.+..
T Consensus        81 ~~~~iid~sT   90 (156)
T d2cvza2          81 EGTYWVDATS   90 (156)
T ss_dssp             TTEEEEECSC
T ss_pred             cccccccccc
Confidence            5556666554

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=92.70  E-value=0.11  Score=35.98  Aligned_cols=43  Identities=21%  Similarity=0.325  Sum_probs=33.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHh
Q 044485           13 KVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDI   56 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~   56 (257)
                      |++.|+|+ |.+|.++|..|+.++. ++++.+.+++..+.....+
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl   45 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDL   45 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHh
Confidence            57777896 9999999999999884 7999998876654443333

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.50  E-value=0.11  Score=35.18  Aligned_cols=35  Identities=26%  Similarity=0.379  Sum_probs=31.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      ..+.++|.|| |-||..+|..|.+.|.+|.++.+.+
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            3478999987 9999999999999999999997765

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.44  E-value=0.14  Score=38.08  Aligned_cols=80  Identities=15%  Similarity=0.147  Sum_probs=59.7

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      -.+.++|..|+++|.-.++..++.  |..|+.+.++++..+...+.+...+-  ..+.++..|..+-          ...
T Consensus        77 ~~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~--~nv~~~~gd~~~g----------~~~  142 (215)
T d1jg1a_          77 KPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGV--KNVHVILGDGSKG----------FPP  142 (215)
T ss_dssp             CTTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTC--CSEEEEESCGGGC----------CGG
T ss_pred             CccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCC--ceeEEEECccccC----------Ccc
Confidence            357799999999999999888887  56799999998777777666655432  3488888887531          122


Q ss_pred             cCCccEEEeCCCCC
Q 044485           90 YGKLDIMFNNAGTV  103 (257)
Q Consensus        90 ~~~id~lv~~ag~~  103 (257)
                      .++.|.++.+++..
T Consensus       143 ~~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         143 KAPYDVIIVTAGAP  156 (215)
T ss_dssp             GCCEEEEEECSBBS
T ss_pred             cCcceeEEeecccc
Confidence            35899999988864

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.36  E-value=0.16  Score=35.47  Aligned_cols=37  Identities=19%  Similarity=0.119  Sum_probs=30.0

Q ss_pred             CCcEEEEe-cCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           11 QGKVALIT-GGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        11 ~~k~~lIt-Gas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      .++.++|. .+++.||..+|..|+++|++|.++.+...
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            34555555 45689999999999999999999988754

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.33  E-value=0.18  Score=37.41  Aligned_cols=80  Identities=15%  Similarity=0.233  Sum_probs=57.6

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|.+||-.|+++|.-.++..++...+..|+.++.+++.++...+.++...-  ..+.++..|..+..          ...
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~--~n~~~~~~d~~~~~----------~~~  142 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI--ENVIFVCGDGYYGV----------PEF  142 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC--CSEEEEESCGGGCC----------GGG
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcc--cccccccCchHHcc----------ccc
Confidence            577999999998887777767776777899999999888888777655432  22666666654311          112


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                      +..|.++.+++.
T Consensus       143 ~~fD~I~~~~~~  154 (213)
T d1dl5a1         143 SPYDVIFVTVGV  154 (213)
T ss_dssp             CCEEEEEECSBB
T ss_pred             cchhhhhhhccH
Confidence            479999988875

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.31  E-value=0.086  Score=39.86  Aligned_cols=34  Identities=18%  Similarity=0.206  Sum_probs=30.1

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      .++|+|.|| |--|..+|..|+++|++|++..|+.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            478999998 8889999999999999999998754

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.24  E-value=0.64  Score=31.29  Aligned_cols=87  Identities=13%  Similarity=0.140  Sum_probs=56.4

Q ss_pred             cCCcEEEEecCC---CchHHHHHHHHHHcC-CeEEEeeCcchhh--HhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485           10 LQGKVALITGGA---RGIGECTARLFSKHG-AKVLIADIKDDLG--ESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus        10 ~~~k~~lItGas---~giG~~ia~~l~~~g-~~Vi~~~r~~~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      ++-|++.|.|+|   +.+|..+.+.|.+.| ..|+.+..+.+..  .++...+.+....   +..+.+ ...++.+.+++
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~---vDlvvi-~vp~~~~~~~~   81 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDE---IDLAII-VVPKRFVKDTL   81 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSC---CSEEEE-CSCHHHHHHHH
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCC---CceEEE-ecChHHhHHHH
Confidence            678999999999   889999999987766 5798887654332  1233333333321   333332 33688888889


Q ss_pred             HHHHHHcCCccEE-EeCCCC
Q 044485           84 NTAVTQYGKLDIM-FNNAGT  102 (257)
Q Consensus        84 ~~~~~~~~~id~l-v~~ag~  102 (257)
                      +++.+.  ++..+ +..+|+
T Consensus        82 ~~~~~~--g~~~~vi~s~Gf   99 (129)
T d2csua1          82 IQCGEK--GVKGVVIITAGF   99 (129)
T ss_dssp             HHHHHH--TCCEEEECCCSS
T ss_pred             HHHHHc--CCCEEEEecccc
Confidence            888876  35554 444443

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.19  E-value=0.18  Score=35.07  Aligned_cols=34  Identities=6%  Similarity=0.030  Sum_probs=26.0

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcC----CeEEEeeCcc
Q 044485           13 KVALITGGARGIGECTARLFSKHG----AKVLIADIKD   46 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g----~~Vi~~~r~~   46 (257)
                      |++-|.||||-.|+.+.+.|.++.    .++++.+++.
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            578899999999999999887763    3466665543

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=91.96  E-value=0.1  Score=36.89  Aligned_cols=35  Identities=17%  Similarity=0.341  Sum_probs=29.8

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGA--KVLIADIKD   46 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~   46 (257)
                      .||+|+|.|| |-.|..+|..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3799999998 7889999999999884  688887654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.86  E-value=0.15  Score=35.54  Aligned_cols=38  Identities=11%  Similarity=0.003  Sum_probs=30.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhH
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESV   52 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~   52 (257)
                      +|-|.|. |-+|.++++.|.+.|++|+..+++.+.....
T Consensus         2 kIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           2 RVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            4556654 9999999999999999999888877655444

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=91.77  E-value=0.077  Score=40.55  Aligned_cols=32  Identities=22%  Similarity=0.307  Sum_probs=28.9

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      |+|.|| |-.|.++|.+|+++|.+|+++.+++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~~   38 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGTM   38 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            788887 89999999999999999999998753

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=91.70  E-value=0.93  Score=35.10  Aligned_cols=32  Identities=22%  Similarity=0.325  Sum_probs=24.0

Q ss_pred             cEEEEecCCCchHH-----HHHHHHHHcCCeEEEeeCc
Q 044485           13 KVALITGGARGIGE-----CTARLFSKHGAKVLIADIK   45 (257)
Q Consensus        13 k~~lItGas~giG~-----~ia~~l~~~g~~Vi~~~r~   45 (257)
                      |+|||++|+.| |.     +++++|.++|++|..++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            56777766545 65     6999999999998876644

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.65  E-value=0.22  Score=37.40  Aligned_cols=74  Identities=11%  Similarity=0.090  Sum_probs=55.1

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .++++|=.|++.|   .++..|+++|++|+.++.++..++.+.+.....+   .++.++..|+.+.+.           -
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~---~~i~~~~~d~~~l~~-----------~  103 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERN---LKIEFLQGDVLEIAF-----------K  103 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCCEEEESCGGGCCC-----------C
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccccc---ccchheehhhhhccc-----------c
Confidence            4578999999876   4466789999999999999998888777765443   248889998865431           1


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                      +..|.|++.-+
T Consensus       104 ~~fD~I~~~~~  114 (251)
T d1wzna1         104 NEFDAVTMFFS  114 (251)
T ss_dssp             SCEEEEEECSS
T ss_pred             cccchHhhhhh
Confidence            36898887543

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.55  E-value=0.54  Score=32.48  Aligned_cols=81  Identities=11%  Similarity=0.183  Sum_probs=52.1

Q ss_pred             ccccCCcEEEEecCCCc-hHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHH
Q 044485            7 LRRLQGKVALITGGARG-IGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVN   84 (257)
Q Consensus         7 ~~~~~~k~~lItGas~g-iG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~   84 (257)
                      ...++|+.+|=.|+++| +|.    ..+.+|+ +|+.++.+++..+.+.+.+...+ ...++.+++.|..+      +++
T Consensus        10 ~~~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~-~~~~~~ii~~D~~~------~l~   78 (152)
T d2esra1          10 GPYFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTK-AENRFTLLKMEAER------AID   78 (152)
T ss_dssp             CSCCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTT-CGGGEEEECSCHHH------HHH
T ss_pred             HhhCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcc-cccchhhhcccccc------ccc
Confidence            34678999986665544 544    4566887 59999999887766666554432 22347888887432      122


Q ss_pred             HHHHHcCCccEEEeCCC
Q 044485           85 TAVTQYGKLDIMFNNAG  101 (257)
Q Consensus        85 ~~~~~~~~id~lv~~ag  101 (257)
                         ...+..|+++.+..
T Consensus        79 ---~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 ---CLTGRFDLVFLDPP   92 (152)
T ss_dssp             ---HBCSCEEEEEECCS
T ss_pred             ---ccccccceeEechh
Confidence               22357999988754

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=91.40  E-value=0.18  Score=36.75  Aligned_cols=83  Identities=16%  Similarity=0.198  Sum_probs=59.1

Q ss_pred             CCcEEE-EecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVAL-ITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~l-ItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      .+.+++ +|-|+||.-.++.+.+  .+..|+.++++++.++...+.+....   .++.++..++++.+.+   +...  .
T Consensus        23 ~~~~~lD~t~G~Gghs~~il~~~--~~~~vi~~D~d~~~l~~a~~~l~~~~---~r~~~~~~~f~~~~~~---~~~~--~   92 (192)
T d1m6ya2          23 DEKIILDCTVGEGGHSRAILEHC--PGCRIIGIDVDSEVLRIAEEKLKEFS---DRVSLFKVSYREADFL---LKTL--G   92 (192)
T ss_dssp             TTCEEEETTCTTSHHHHHHHHHC--TTCEEEEEESCHHHHHHHHHHTGGGT---TTEEEEECCGGGHHHH---HHHT--T
T ss_pred             CCCEEEEecCCCcHHHHHHHhcC--CCCeEEEeechHHHHHHHHHhhcccc---ccccchhHHHhhHHHH---HHHc--C
Confidence            344444 6777788888888876  35789999999999888877775532   3488999988775443   2221  1


Q ss_pred             cCCccEEEeCCCCC
Q 044485           90 YGKLDIMFNNAGTV  103 (257)
Q Consensus        90 ~~~id~lv~~ag~~  103 (257)
                      .+.+|.++...|+.
T Consensus        93 ~~~vdgIl~DlGvS  106 (192)
T d1m6ya2          93 IEKVDGILMDLGVS  106 (192)
T ss_dssp             CSCEEEEEEECSCC
T ss_pred             CCCcceeeeccchh
Confidence            25899999999874

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.31  E-value=0.12  Score=40.83  Aligned_cols=35  Identities=31%  Similarity=0.433  Sum_probs=30.8

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      +|+++|.|| |--|..+|..|+++|.+|+++.++..
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            589999998 77899999999999999999987654

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.27  E-value=0.15  Score=38.41  Aligned_cols=76  Identities=11%  Similarity=0.004  Sum_probs=57.9

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ...++++|=.|++.|.   ++..|+++|.+|+.++.+++.++.+.+.....+   ..+.++..|+.+.+           
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~---~~v~~~~~d~~~~~-----------   97 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQG---LKPRLACQDISNLN-----------   97 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTT---CCCEEECCCGGGCC-----------
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccC---ccceeeccchhhhc-----------
Confidence            3567899999999885   788999999999999999999888777665433   23788888886542           


Q ss_pred             HcCCccEEEeCCC
Q 044485           89 QYGKLDIMFNNAG  101 (257)
Q Consensus        89 ~~~~id~lv~~ag  101 (257)
                      ..+++|++++..+
T Consensus        98 ~~~~fD~i~~~~~  110 (246)
T d1y8ca_          98 INRKFDLITCCLD  110 (246)
T ss_dssp             CSCCEEEEEECTT
T ss_pred             ccccccccceeee
Confidence            1247999987544

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.20  E-value=0.78  Score=30.19  Aligned_cols=84  Identities=13%  Similarity=0.125  Sum_probs=54.6

Q ss_pred             cEEEEecCC---CchHHHHHHHHHHcCCeEEEeeCcchhh--HhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           13 KVALITGGA---RGIGECTARLFSKHGAKVLIADIKDDLG--ESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        13 k~~lItGas---~giG~~ia~~l~~~g~~Vi~~~r~~~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      |++.|.|+|   +..|..+.+.|.+.|++|+.+..+.+..  .++...+.+....   +..+.. ...++.+.++++++.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~---~D~vvi-~vp~~~~~~~l~~~~   77 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKD---VDVIVF-VVPPKVGLQVAKEAV   77 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTT---CCEEEE-CSCHHHHHHHHHHHH
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhcccc---ceEEEE-EeCHHHHHHHHHHHH
Confidence            789999999   6699999999999999999886554322  1222223322221   232222 346778888888877


Q ss_pred             HHcCCccEEEeCCCC
Q 044485           88 TQYGKLDIMFNNAGT  102 (257)
Q Consensus        88 ~~~~~id~lv~~ag~  102 (257)
                      +.  ++..++...|.
T Consensus        78 ~~--g~k~v~~~~g~   90 (116)
T d1y81a1          78 EA--GFKKLWFQPGA   90 (116)
T ss_dssp             HT--TCCEEEECTTS
T ss_pred             hc--CCceEEeccch
Confidence            65  46677666553

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.18  E-value=0.11  Score=40.52  Aligned_cols=37  Identities=19%  Similarity=0.270  Sum_probs=31.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      .-+.|+|+|.|| |--|...|.+|+++|++|+++.++.
T Consensus        27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            345689999998 7789999999999999999997654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=91.09  E-value=0.23  Score=34.62  Aligned_cols=79  Identities=18%  Similarity=0.279  Sum_probs=48.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCC-CCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           13 KVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSS-SSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .++.|.|+ |.+|.+++..++..+. ++++.+++++..+....++.... ...........+  +.+           ..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~-----------~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYD-----------DL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccc-----------cc
Confidence            46788896 9999999998888884 59999998866554444432210 000112222222  221           12


Q ss_pred             CCccEEEeCCCCCCC
Q 044485           91 GKLDIMFNNAGTVDE  105 (257)
Q Consensus        91 ~~id~lv~~ag~~~~  105 (257)
                      ..-|++|.++|....
T Consensus        70 ~~advvvitag~~~~   84 (150)
T d1t2da1          70 AGADVVIVTAGFTKA   84 (150)
T ss_dssp             TTCSEEEECCSCSSC
T ss_pred             CCCcEEEEecccccC
Confidence            368999999997643

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.68  E-value=0.45  Score=31.24  Aligned_cols=34  Identities=35%  Similarity=0.302  Sum_probs=27.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHc---CCeEEEeeCcc
Q 044485           12 GKVALITGGARGIGECTARLFSKH---GAKVLIADIKD   46 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~---g~~Vi~~~r~~   46 (257)
                      .|+++|.|| |.+|..+|..|.+.   |..|.++.|.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            478999987 89999999876654   78899988765

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=90.66  E-value=0.37  Score=31.75  Aligned_cols=34  Identities=21%  Similarity=0.201  Sum_probs=26.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHc---CCeEEEeeCcc
Q 044485           12 GKVALITGGARGIGECTARLFSKH---GAKVLIADIKD   46 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~---g~~Vi~~~r~~   46 (257)
                      .++++|.|| |.+|..+|..|.+.   |.+|.++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            478999988 99999999766554   56798887764

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.65  E-value=0.43  Score=37.29  Aligned_cols=77  Identities=22%  Similarity=0.223  Sum_probs=52.2

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .+++|+||-.|++.|+   ++..+++.|+ .|+.++.++... .+.+..... +...++.++..|+.+...         
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~-~a~~~~~~~-~~~~~i~~~~~~~~~l~~---------   98 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILY-QAMDIIRLN-KLEDTITLIKGKIEEVHL---------   98 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHH-HHHHHHHHT-TCTTTEEEEESCTTTSCC---------
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHH-HHHHHHHHh-CCCccceEEEeeHHHhcC---------
Confidence            4689999999999886   6677888897 599998877543 333333322 223458888888876531         


Q ss_pred             HHcCCccEEEeCC
Q 044485           88 TQYGKLDIMFNNA  100 (257)
Q Consensus        88 ~~~~~id~lv~~a  100 (257)
                       ...++|+|+...
T Consensus        99 -~~~~~D~Ivse~  110 (311)
T d2fyta1          99 -PVEKVDVIISEW  110 (311)
T ss_dssp             -SCSCEEEEEECC
T ss_pred             -ccccceEEEEee
Confidence             113789998753

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.41  E-value=0.089  Score=34.42  Aligned_cols=39  Identities=13%  Similarity=0.231  Sum_probs=32.3

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      .++.||+|+|.|+ |.-|..+|..|+..+.+|+...|+..
T Consensus        28 ~~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          28 ELFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hhcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            3689999999998 58899999999998888776666543

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=90.33  E-value=0.93  Score=31.39  Aligned_cols=44  Identities=18%  Similarity=0.157  Sum_probs=32.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc--CCeEEEee--CcchhhHhHHHHh
Q 044485           13 KVALITGGARGIGECTARLFSKH--GAKVLIAD--IKDDLGESVCKDI   56 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~--g~~Vi~~~--r~~~~~~~~~~~~   56 (257)
                      |++.|-|+||.||.....-..+.  .++|+..+  ++.+.+.+.+.+.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence            78999999999999999988886  46765543  4444555555554

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.08  E-value=0.3  Score=33.65  Aligned_cols=38  Identities=18%  Similarity=0.194  Sum_probs=30.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEeeCcchhhHhH
Q 044485           14 VALITGGARGIGECTARLFSKHGA--KVLIADIKDDLGESV   52 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~--~Vi~~~r~~~~~~~~   52 (257)
                      ++.|.|+ |.+|.++|..++.+|.  ++++++++++..+-.
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~   41 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGE   41 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHH
Confidence            5677796 9999999999999984  499999988765433

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=90.08  E-value=0.18  Score=38.53  Aligned_cols=36  Identities=22%  Similarity=0.288  Sum_probs=31.9

Q ss_pred             ccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEee
Q 044485            7 LRRLQGKVALITGGARGIGECTARLFSKHGAKVLIAD   43 (257)
Q Consensus         7 ~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~   43 (257)
                      ..++.|++++|-| .|.+|..+++.|.+.|+.|+.++
T Consensus        31 ~~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          31 NDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             TCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            3478999999998 69999999999999999987764

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.74  E-value=0.25  Score=38.45  Aligned_cols=37  Identities=22%  Similarity=0.314  Sum_probs=32.5

Q ss_pred             cccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEee
Q 044485            6 MLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIAD   43 (257)
Q Consensus         6 ~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~   43 (257)
                      +..++.||+++|-|- |.+|..+|+.|.+.|+.|+.++
T Consensus        30 l~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          30 MTPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             CCSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            345789999999986 8999999999999999988775

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=89.69  E-value=0.86  Score=29.93  Aligned_cols=81  Identities=14%  Similarity=0.126  Sum_probs=54.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      ||+|||.--...+-..+.+.|...|+.|..+....+.++.+.+.-       .++.++...+-+.+. -++++++++...
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~~~~~~~-------~dlillD~~mP~~~G-~el~~~lr~~~~   72 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTKER-------PDLVLLDMKIPGMDG-IEILKRMKVIDE   72 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHHC-------CSEEEEESCCTTCCH-HHHHHHHHHHCT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHHHHHhCC-------CCEEEEeccCCCCCH-HHHHHHHHHhCC
Confidence            589999999999999999999999999887654444443333221       124445444445543 355777877766


Q ss_pred             CccEEEeCC
Q 044485           92 KLDIMFNNA  100 (257)
Q Consensus        92 ~id~lv~~a  100 (257)
                      .+-+++..+
T Consensus        73 ~~pvi~lt~   81 (119)
T d1peya_          73 NIRVIIMTA   81 (119)
T ss_dssp             TCEEEEEES
T ss_pred             CCcEEEEec
Confidence            666776654

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=89.64  E-value=0.16  Score=38.88  Aligned_cols=31  Identities=26%  Similarity=0.511  Sum_probs=27.7

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      |+|.|| |-.|..+|.+|+++|.+|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788876 8889999999999999999998754

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=89.59  E-value=0.16  Score=39.41  Aligned_cols=32  Identities=19%  Similarity=0.210  Sum_probs=27.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcc
Q 044485           14 VALITGGARGIGECTARLFSKHGA-KVLIADIKD   46 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~   46 (257)
                      .|+|.|| |-+|.++|.+|+++|. +|+++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            4788887 7999999999999997 599998864

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=89.55  E-value=0.13  Score=37.73  Aligned_cols=31  Identities=16%  Similarity=0.177  Sum_probs=28.0

Q ss_pred             cEEEEecCCCchHH-----HHHHHHHHcCCeEEEee
Q 044485           13 KVALITGGARGIGE-----CTARLFSKHGAKVLIAD   43 (257)
Q Consensus        13 k~~lItGas~giG~-----~ia~~l~~~g~~Vi~~~   43 (257)
                      |++.|||.++|.|+     .+|+.|+++|.+|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            78999999999997     57899999999998876

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=89.54  E-value=0.78  Score=34.75  Aligned_cols=74  Identities=20%  Similarity=0.252  Sum_probs=52.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      ...|+++|=.|+++|+   ++..+++.|++|+.++.++..++.+.+..+..+   ..+.++..|+.+      .+     
T Consensus       118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~---~~~~~~~~d~~~------~~-----  180 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNG---VRPRFLEGSLEA------AL-----  180 (254)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTT---CCCEEEESCHHH------HG-----
T ss_pred             cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcC---CceeEEeccccc------cc-----
Confidence            4578999999999886   344577789999999999998887776554432   225666665421      11     


Q ss_pred             HcCCccEEEeC
Q 044485           89 QYGKLDIMFNN   99 (257)
Q Consensus        89 ~~~~id~lv~~   99 (257)
                      ..++.|.++.|
T Consensus       181 ~~~~fD~V~an  191 (254)
T d2nxca1         181 PFGPFDLLVAN  191 (254)
T ss_dssp             GGCCEEEEEEE
T ss_pred             cccccchhhhc
Confidence            12579999876

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.54  E-value=0.85  Score=32.50  Aligned_cols=77  Identities=13%  Similarity=0.150  Sum_probs=53.2

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+.++|=.|++.|   .++..|++.+.+|+.++.+++.++.+.+.++..+- ..++.++.+|..          +.....
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl-~~~v~~~~gda~----------~~~~~~   98 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGL-GDNVTLMEGDAP----------EALCKI   98 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTC-CTTEEEEESCHH----------HHHTTS
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCC-CcceEEEECchh----------hccccc
Confidence            5778888888766   34455677788999999999998888877765432 234788888742          111223


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                      ..+|.++.+.+
T Consensus        99 ~~~D~v~~~~~  109 (186)
T d1l3ia_          99 PDIDIAVVGGS  109 (186)
T ss_dssp             CCEEEEEESCC
T ss_pred             CCcCEEEEeCc
Confidence            57999998754

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=89.52  E-value=1.1  Score=34.97  Aligned_cols=83  Identities=11%  Similarity=0.021  Sum_probs=52.2

Q ss_pred             CCcEEEEecC-CCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           11 QGKVALITGG-ARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        11 ~~k~~lItGa-s~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ++++||=..+ +|+++.+    +++.|+.|+.++.+...++.+.+.....+-...++.++..|+.      +++++....
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            4678884444 4444443    4567999999999998877776644322212223777777663      334444444


Q ss_pred             cCCccEEEeCCCCC
Q 044485           90 YGKLDIMFNNAGTV  103 (257)
Q Consensus        90 ~~~id~lv~~ag~~  103 (257)
                      -.+.|+||.+.-..
T Consensus       202 ~~~fD~IilDPP~f  215 (309)
T d2igta1         202 GSTYDIILTDPPKF  215 (309)
T ss_dssp             TCCBSEEEECCCSE
T ss_pred             CCCCCEEEECCCcc
Confidence            45799999987644

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.47  E-value=0.72  Score=33.14  Aligned_cols=76  Identities=12%  Similarity=0.095  Sum_probs=52.4

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      +.++++|=.|++.|.   .+..|+++|++|+.++.++..++.+.+.....+-  ..+.+...|+.+..     .+     
T Consensus        29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~--~~~~~~~~d~~~~~-----~~-----   93 (198)
T d2i6ga1          29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGL--DNLQTDLVDLNTLT-----FD-----   93 (198)
T ss_dssp             SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--TTEEEEECCTTTCC-----CC-----
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccc--cchhhhheeccccc-----cc-----
Confidence            456789999986543   5678899999999999999888877665544321  12566677766543     11     


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                       +..|+|+.+..
T Consensus        94 -~~fD~I~~~~~  104 (198)
T d2i6ga1          94 -GEYDFILSTVV  104 (198)
T ss_dssp             -CCEEEEEEESC
T ss_pred             -ccccEEEEeee
Confidence             36888887654

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=89.42  E-value=0.48  Score=35.28  Aligned_cols=76  Identities=16%  Similarity=0.089  Sum_probs=53.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+.++|-.|+++|.-.++   |++.+..|+.+.++++..+...+.+...    ..+.++..|...-          ....
T Consensus        70 ~g~~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~~A~~~~~~~----~nv~~~~~d~~~g----------~~~~  132 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYNYASKLLSYY----NNIKLILGDGTLG----------YEEE  132 (224)
T ss_dssp             TTCEEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHHHHHHHHTTC----SSEEEEESCGGGC----------CGGG
T ss_pred             ccceEEEecCCCCHHHHH---HHHHhcccccccccHHHHHHHHHHHhcc----cccccccCchhhc----------chhh
Confidence            677899999998865544   5556678999999988777666555432    2377888887431          1123


Q ss_pred             CCccEEEeCCCCC
Q 044485           91 GKLDIMFNNAGTV  103 (257)
Q Consensus        91 ~~id~lv~~ag~~  103 (257)
                      ++.|.++.+++..
T Consensus       133 ~pfD~Iiv~~a~~  145 (224)
T d1vbfa_         133 KPYDRVVVWATAP  145 (224)
T ss_dssp             CCEEEEEESSBBS
T ss_pred             hhHHHHHhhcchh
Confidence            5799999888753

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=89.33  E-value=0.22  Score=30.51  Aligned_cols=34  Identities=15%  Similarity=0.181  Sum_probs=30.5

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      |++.|.|+ |.+|+-++.+-.+.|.+|++.+.+.+
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            78999987 89999999999999999999986654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=88.79  E-value=0.48  Score=33.37  Aligned_cols=87  Identities=13%  Similarity=0.121  Sum_probs=53.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHc-CCeEE-EeeCcch-hhHhHHHHhcc-----------CCCCCCCceeEecCCCCHHH
Q 044485           13 KVALITGGARGIGECTARLFSKH-GAKVL-IADIKDD-LGESVCKDIGS-----------SSSSASGCSYVHCDVTKEKD   78 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~-g~~Vi-~~~r~~~-~~~~~~~~~~~-----------~~~~~~~v~~~~~D~~~~~~   78 (257)
                      -++.|.|++|-+|+++++...+. ++.++ .++|... ...+...++..           .......+. +..|++.++.
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~   83 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEG   83 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHH
Confidence            47999999999999999999876 66643 3344321 11100000000           000001112 5589999999


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCCC
Q 044485           79 IENAVNTAVTQYGKLDIMFNNAGT  102 (257)
Q Consensus        79 v~~~~~~~~~~~~~id~lv~~ag~  102 (257)
                      ....++...+.  ++.+|+-..|.
T Consensus        84 ~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          84 TLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHhc--cceeEEecCCC
Confidence            99988877665  57788877774

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=88.76  E-value=1.3  Score=33.88  Aligned_cols=80  Identities=16%  Similarity=0.186  Sum_probs=51.6

Q ss_pred             cEEEEecCCCc-hHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           13 KVALITGGARG-IGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        13 k~~lItGas~g-iG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      ++++-.|+++| |+.+++ +  ...+.|+.++.+++.++-+.+.....+ ...++.++..|+.+.         ..+..+
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~-~~~~~~i~~~~~~~~---------~~~~~~  178 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHG-VSDRFFVRKGEFLEP---------FKEKFA  178 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTT-CTTSEEEEESSTTGG---------GGGGTT
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcC-CCceeEEeecccccc---------cccccC
Confidence            45664555555 555544 2  357889999999987766665554332 223467788888654         222346


Q ss_pred             CccEEEeCCCCCCC
Q 044485           92 KLDIMFNNAGTVDE  105 (257)
Q Consensus        92 ~id~lv~~ag~~~~  105 (257)
                      ++|+||.|..+...
T Consensus       179 ~fDlIVsNPPYI~~  192 (271)
T d1nv8a_         179 SIEMILSNPPYVKS  192 (271)
T ss_dssp             TCCEEEECCCCBCG
T ss_pred             cccEEEEcccccCc
Confidence            89999999987643

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=88.66  E-value=0.27  Score=37.15  Aligned_cols=35  Identities=34%  Similarity=0.518  Sum_probs=31.4

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEee
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIAD   43 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~   43 (257)
                      .+++|++++|-| .|.+|..+|+.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            478999999997 69999999999999999988765

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.63  E-value=0.79  Score=33.27  Aligned_cols=75  Identities=17%  Similarity=0.121  Sum_probs=53.9

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+.+||=.|++.|.   ++..|++.|+.|+.++.++..++.+.+......   ..+..+..|..+..     +     ..
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~---~~~~~~~~d~~~l~-----~-----~~  100 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE---SNVEFIVGDARKLS-----F-----ED  100 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCTTSCC-----S-----CT
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccc---cccccccccccccc-----c-----cC
Confidence            34578999998876   667888999999999999888877776654433   23667777776532     0     11


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                      +..|+|+....
T Consensus       101 ~~fD~I~~~~~  111 (226)
T d1ve3a1         101 KTFDYVIFIDS  111 (226)
T ss_dssp             TCEEEEEEESC
T ss_pred             cCceEEEEecc
Confidence            36899887654

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=88.41  E-value=0.79  Score=32.64  Aligned_cols=31  Identities=29%  Similarity=0.228  Sum_probs=25.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcC-CeEEEee
Q 044485           13 KVALITGGARGIGECTARLFSKHG-AKVLIAD   43 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g-~~Vi~~~   43 (257)
                      .+|-|.||||-.|..+.+.|.++- .++..+.
T Consensus         2 ikVaIvGATGyvG~eLirlL~~HP~~ei~~l~   33 (176)
T d1vkna1           2 IRAGIIGATGYTGLELVRLLKNHPEAKITYLS   33 (176)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCCceEEEee
Confidence            478999999999999999998864 5554444

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=87.97  E-value=4.8  Score=31.21  Aligned_cols=84  Identities=14%  Similarity=0.065  Sum_probs=53.7

Q ss_pred             cCCcEEEEecC-CCchHHHHHHHHHHcCC-eEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485           10 LQGKVALITGG-ARGIGECTARLFSKHGA-KVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus        10 ~~~k~~lItGa-s~giG~~ia~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ..|+++|=..+ +|+++.    ..+..|+ .|+.++.++..++...+.....+-...++.++..|+.      ..++...
T Consensus       143 ~~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~  212 (317)
T d2b78a2         143 AAGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYAR  212 (317)
T ss_dssp             TBTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHH
T ss_pred             hCCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHH
Confidence            35788885544 455443    3455787 4999999998877776655433322234778888763      2244444


Q ss_pred             HHcCCccEEEeCCCCC
Q 044485           88 TQYGKLDIMFNNAGTV  103 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~  103 (257)
                      +...+.|+||.+....
T Consensus       213 ~~~~~fD~Ii~DPP~f  228 (317)
T d2b78a2         213 RHHLTYDIIIIDPPSF  228 (317)
T ss_dssp             HTTCCEEEEEECCCCC
T ss_pred             hhcCCCCEEEEcChhh
Confidence            4445799999997644

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=87.93  E-value=0.43  Score=34.22  Aligned_cols=83  Identities=12%  Similarity=0.156  Sum_probs=52.8

Q ss_pred             ccCCcEEE-EecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHH
Q 044485            9 RLQGKVAL-ITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTA   86 (257)
Q Consensus         9 ~~~~k~~l-ItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~   86 (257)
                      .++|+.+| +..|||++|.+    .+.+|+. |+.++.+.+..+.+.+.+..... ..++.++..|+.      +++++.
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~-~~~~~i~~~D~~------~~l~~~  107 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKE-PEKFEVRKMDAN------RALEQF  107 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTC-GGGEEEEESCHH------HHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhc-ccccccccccch------hhhhhh
Confidence            46788887 45556667764    5558886 99999998776666555433221 123677777763      234444


Q ss_pred             HHHcCCccEEEeCCCC
Q 044485           87 VTQYGKLDIMFNNAGT  102 (257)
Q Consensus        87 ~~~~~~id~lv~~ag~  102 (257)
                      .+...+.|+|+.+..+
T Consensus       108 ~~~~~~fDlIflDPPY  123 (182)
T d2fhpa1         108 YEEKLQFDLVLLDPPY  123 (182)
T ss_dssp             HHTTCCEEEEEECCCG
T ss_pred             cccCCCcceEEechhh
Confidence            4444579999987753

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=87.81  E-value=0.83  Score=33.42  Aligned_cols=77  Identities=17%  Similarity=0.170  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .+++||=.|++.|.-   +..|+++|++|+.++-+++.++.+.+.....+.  .++.++.+|..+.. .         ..
T Consensus        15 ~~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~--~~i~~~~~d~~~l~-~---------~~   79 (231)
T d1vl5a_          15 GNEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGH--QQVEYVQGDAEQMP-F---------TD   79 (231)
T ss_dssp             SCCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTC--CSEEEEECCC-CCC-S---------CT
T ss_pred             CcCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccc--cccccccccccccc-c---------cc
Confidence            357899999887743   466788999999999999888777665544332  23778888887642 1         01


Q ss_pred             CCccEEEeCCCC
Q 044485           91 GKLDIMFNNAGT  102 (257)
Q Consensus        91 ~~id~lv~~ag~  102 (257)
                      +..|+++.+...
T Consensus        80 ~~fD~v~~~~~l   91 (231)
T d1vl5a_          80 ERFHIVTCRIAA   91 (231)
T ss_dssp             TCEEEEEEESCG
T ss_pred             cccccccccccc
Confidence            368888877654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.80  E-value=0.23  Score=35.22  Aligned_cols=30  Identities=20%  Similarity=0.035  Sum_probs=25.2

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEe
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIA   42 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~   42 (257)
                      ++.|+|.|| |.+|..+|..|.+.|.+|.++
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            578889887 999999999999999874433

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.69  E-value=0.65  Score=34.79  Aligned_cols=35  Identities=23%  Similarity=0.333  Sum_probs=29.8

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHH-cCCeEEEee
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSK-HGAKVLIAD   43 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~-~g~~Vi~~~   43 (257)
                      .++++++++|-| .|.+|..+|+.|.+ .|+.|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            478999999886 69999999999986 599987765

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=87.59  E-value=0.6  Score=31.01  Aligned_cols=77  Identities=9%  Similarity=0.107  Sum_probs=50.2

Q ss_pred             CCcEEEEecCCC----------chHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHH
Q 044485           11 QGKVALITGGAR----------GIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIE   80 (257)
Q Consensus        11 ~~k~~lItGas~----------giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~   80 (257)
                      ..|++||.|++.          --+.+.++.|.+.|+.++++..+++...--.+       ...++  | .+--..+.+.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d-------~aD~l--Y-feplt~e~v~   72 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD-------TSDRL--Y-FEPVTLEDVL   72 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT-------SSSEE--E-CCCCSHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh-------hcCce--E-EccCCHHHHH
Confidence            357899999862          34668899999999999999888765422111       11112  2 2222566676


Q ss_pred             HHHHHHHHHcCCccEEEeCCCC
Q 044485           81 NAVNTAVTQYGKLDIMFNNAGT  102 (257)
Q Consensus        81 ~~~~~~~~~~~~id~lv~~ag~  102 (257)
                      ++++.-     ++|.++...|.
T Consensus        73 ~Ii~~E-----~p~~ii~~~GG   89 (121)
T d1a9xa4          73 EIVRIE-----KPKGVIVQYGG   89 (121)
T ss_dssp             HHHHHH-----CCSEEECSSST
T ss_pred             HHHHHh-----CCCEEEeehhh
Confidence            666542     68999887774

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.48  E-value=0.76  Score=35.89  Aligned_cols=78  Identities=19%  Similarity=0.213  Sum_probs=51.1

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ..+||+||-.|++.|+   ++..+++.|+. |+.++.++. .....+.+... +...++.++..|+.+.+.         
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n-~~~~~v~~~~~~~~~~~~---------   96 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKAN-KLDHVVTIIKGKVEEVEL---------   96 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHT-TCTTTEEEEESCTTTCCC---------
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHh-CCccccceEeccHHHccc---------
Confidence            3579999999998885   56677788875 999987653 33333333322 223448888888876431         


Q ss_pred             HHcCCccEEEeCCC
Q 044485           88 TQYGKLDIMFNNAG  101 (257)
Q Consensus        88 ~~~~~id~lv~~ag  101 (257)
                       ....+|+++..-.
T Consensus        97 -~~~~~D~ivs~~~  109 (316)
T d1oria_          97 -PVEKVDIIISEWM  109 (316)
T ss_dssp             -SSSCEEEEEECCC
T ss_pred             -ccceeEEEeeeee
Confidence             1246899987643

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.45  E-value=0.28  Score=37.48  Aligned_cols=37  Identities=19%  Similarity=0.264  Sum_probs=31.5

Q ss_pred             CCcEEEEecCCCchHHHH-----HHHHHHcCCeEEEeeCcch
Q 044485           11 QGKVALITGGARGIGECT-----ARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        11 ~~k~~lItGas~giG~~i-----a~~l~~~g~~Vi~~~r~~~   47 (257)
                      .+++++|+.|-||.|+..     |..|+++|.+|.+++-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            467778888899999975     8999999999999998853

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.27  E-value=0.29  Score=35.91  Aligned_cols=31  Identities=29%  Similarity=0.297  Sum_probs=27.4

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      |+|.|| |--|...|..|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            688885 8889999999999999999998764

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.22  E-value=1.2  Score=31.95  Aligned_cols=78  Identities=15%  Similarity=0.108  Sum_probs=55.2

Q ss_pred             cCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQ   89 (257)
Q Consensus        10 ~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~   89 (257)
                      ..++++|=.|++.|   .++..+++.+.+|++++.++...+.+.+.+....-...++.++..|+.+.-  .         
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~--~---------  116 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV--K---------  116 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC--T---------
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh--c---------
Confidence            46789998888776   345567778889999999988777776655443333345788889986421  1         


Q ss_pred             cCCccEEEeCCC
Q 044485           90 YGKLDIMFNNAG  101 (257)
Q Consensus        90 ~~~id~lv~~ag  101 (257)
                      -+..|.|+.|..
T Consensus       117 ~~~fD~Ii~~~p  128 (194)
T d1dusa_         117 DRKYNKIITNPP  128 (194)
T ss_dssp             TSCEEEEEECCC
T ss_pred             cCCceEEEEccc
Confidence            136999998865

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.54  E-value=0.3  Score=37.42  Aligned_cols=32  Identities=22%  Similarity=0.264  Sum_probs=29.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      .|+|.|| |-.|..+|..|++.|.+|+++.|++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            5899998 5999999999999999999998875

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.31  E-value=0.51  Score=32.82  Aligned_cols=34  Identities=18%  Similarity=0.146  Sum_probs=27.4

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcc
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAK-VLIADIKD   46 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~   46 (257)
                      +++++|.|| |..|...|..+.+.|+. |+++.|..
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            456777766 89999999999999987 77777754

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=86.26  E-value=0.88  Score=35.66  Aligned_cols=84  Identities=10%  Similarity=0.065  Sum_probs=54.9

Q ss_pred             ccCCcEEEEecCC-CchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGA-RGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas-~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      ...|++||=.++. |+++.+    ++..+..|+.++.++..++.+.+.....+-  ..+.++..|..+.      .+.+.
T Consensus       143 ~~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl--~~~~~i~~d~~~~------~~~~~  210 (318)
T d1wxxa2         143 RFRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGL--GNVRVLEANAFDL------LRRLE  210 (318)
T ss_dssp             GCCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTC--TTEEEEESCHHHH------HHHHH
T ss_pred             HhCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCC--CCcceeeccHHHH------hhhhH
Confidence            4578899866655 444433    444567899999999988887776654432  2367777776432      23333


Q ss_pred             HHcCCccEEEeCCCCCC
Q 044485           88 TQYGKLDIMFNNAGTVD  104 (257)
Q Consensus        88 ~~~~~id~lv~~ag~~~  104 (257)
                      +.....|.||.+.....
T Consensus       211 ~~~~~fD~Vi~DpP~~~  227 (318)
T d1wxxa2         211 KEGERFDLVVLDPPAFA  227 (318)
T ss_dssp             HTTCCEEEEEECCCCSC
T ss_pred             hhhcCCCEEEEcCCccc
Confidence            34457999999986543

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.25  E-value=1.4  Score=29.59  Aligned_cols=34  Identities=24%  Similarity=0.176  Sum_probs=27.7

Q ss_pred             CcEEEEecCCCchHHHHHHHHH----HcCCeEEEeeCcc
Q 044485           12 GKVALITGGARGIGECTARLFS----KHGAKVLIADIKD   46 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~----~~g~~Vi~~~r~~   46 (257)
                      .|+++|.|| |.+|..+|..|+    +.|.+|+++.+.+
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            578999987 899999998886    4589999887755

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.20  E-value=1.4  Score=30.60  Aligned_cols=85  Identities=15%  Similarity=0.184  Sum_probs=53.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      +|+++.|.+.|||.|--++-.+.+.|.++--  -+++..+++.+.+........ ..-+..+ .+.+...++++.+.+. 
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~--l~~~t~~~L~~~lp~~~~~~N-PlD~~~~-~~~~~~~~~l~~~~~d-   76 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT--LEEKTIEELRSFLPPMAAVKN-PVDMIAS-ARGEDYYRTAKLLLQD-   76 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECC--CCHHHHHHHHHHSCTTCEESS-EEECCTT-CCHHHHHHHHHHHHHS-
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCC--CCHHHHHHHHHhCCCcccCCC-cccccCC-CCHHHHHHHHHHHHcC-
Confidence            4788889999999999999999999977643  344445555555442211000 1112222 3567777777766654 


Q ss_pred             CCccEEEeCC
Q 044485           91 GKLDIMFNNA  100 (257)
Q Consensus        91 ~~id~lv~~a  100 (257)
                      +.+|.++...
T Consensus        77 ~~vd~v~v~~   86 (163)
T d2csua3          77 PNVDMLIAIC   86 (163)
T ss_dssp             TTCSEEEEEE
T ss_pred             CCcCEEEEee
Confidence            5688776543

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.02  E-value=3.2  Score=30.04  Aligned_cols=91  Identities=11%  Similarity=0.019  Sum_probs=57.2

Q ss_pred             CCcEEEEecCCCchHH-----HHHHHHHHc----CCeEEEeeCcchhhHhHHHHhccCCCC-----------CCCceeEe
Q 044485           11 QGKVALITGGARGIGE-----CTARLFSKH----GAKVLIADIKDDLGESVCKDIGSSSSS-----------ASGCSYVH   70 (257)
Q Consensus        11 ~~k~~lItGas~giG~-----~ia~~l~~~----g~~Vi~~~r~~~~~~~~~~~~~~~~~~-----------~~~v~~~~   70 (257)
                      ..-+.+|.||||.+-+     ++-+.+...    +..++.++|++-..++..+.+......           ..++.++.
T Consensus        19 ~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~   98 (203)
T d1qkia1          19 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVA   98 (203)
T ss_dssp             CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCB
T ss_pred             CCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhcccc
Confidence            4567999999998864     343333322    356999999876656665555432111           13477888


Q ss_pred             cCCCCHHHHHHHHHHHHHHcC--CccEEEeCCC
Q 044485           71 CDVTKEKDIENAVNTAVTQYG--KLDIMFNNAG  101 (257)
Q Consensus        71 ~D~~~~~~v~~~~~~~~~~~~--~id~lv~~ag  101 (257)
                      +|++++++.+++-+.+.+...  ..+.+++-|-
T Consensus        99 ~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLAv  131 (203)
T d1qkia1          99 GQYDDAASYQRLNSHMNALHLGSQANRLFYLAL  131 (203)
T ss_dssp             CCTTCHHHHHHHHHHHHHTTTTTTSEEEEEECS
T ss_pred             CcCCChhhHHHHHHHHHHHhcCCCcceEEEEec
Confidence            999999988887666554321  2345666654

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=85.66  E-value=0.38  Score=35.79  Aligned_cols=33  Identities=30%  Similarity=0.412  Sum_probs=28.6

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCcchh
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIKDDL   48 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~   48 (257)
                      ++|.|| |--|...|..|+++|.+|+++.++...
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~   37 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKL   37 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            788887 688999999999999999999887543

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.54  E-value=1.1  Score=35.02  Aligned_cols=78  Identities=21%  Similarity=0.262  Sum_probs=51.0

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCe-EEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAK-VLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAV   87 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~   87 (257)
                      .++|++||-.|++.|+   ++..+++.|+. |+.++.++ ..+.+.+.....+ ...++.++..|+.+.+-         
T Consensus        36 ~~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~-~~~~i~~i~~~~~~l~~---------  101 (328)
T d1g6q1_          36 LFKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNG-FSDKITLLRGKLEDVHL---------  101 (328)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTT-CTTTEEEEESCTTTSCC---------
T ss_pred             cCCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhC-ccccceEEEeehhhccC---------
Confidence            3589999999998874   45667788975 88888764 3434433333322 23458888888876421         


Q ss_pred             HHcCCccEEEeCCC
Q 044485           88 TQYGKLDIMFNNAG  101 (257)
Q Consensus        88 ~~~~~id~lv~~ag  101 (257)
                       ....+|+++..--
T Consensus       102 -~~~~~D~i~se~~  114 (328)
T d1g6q1_         102 -PFPKVDIIISEWM  114 (328)
T ss_dssp             -SSSCEEEEEECCC
T ss_pred             -cccceeEEEEEec
Confidence             0136899887643

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=85.48  E-value=1.6  Score=28.73  Aligned_cols=79  Identities=10%  Similarity=0.079  Sum_probs=52.9

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCC--CHHHHHHHHHHHHHHc
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVT--KEKDIENAVNTAVTQY   90 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~v~~~~~~~~~~~   90 (257)
                      .+|||.--...+...+.+.|...|++|..+....+    ..+.+....     ...+-+|+.  +.+ --++++++++.+
T Consensus         4 ~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~----a~~~l~~~~-----~dlii~D~~mp~~~-G~el~~~l~~~~   73 (123)
T d1krwa_           4 GIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNE----VLAALASKT-----PDVLLSDIRMPGMD-GLALLKQIKQRH   73 (123)
T ss_dssp             CEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSHH----HHHHHTTCC-----CSEEEECCSSSSST-THHHHHHHHHHS
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHH----HHHHHHhCC-----CCEEEehhhcCCch-HHHHHHHHHHhC
Confidence            57999999999999999999999999987654443    333333322     445555554  333 334577777776


Q ss_pred             CCccEEEeCCC
Q 044485           91 GKLDIMFNNAG  101 (257)
Q Consensus        91 ~~id~lv~~ag  101 (257)
                      ..+-+++..+.
T Consensus        74 ~~~piI~~t~~   84 (123)
T d1krwa_          74 PMLPVIIMTAH   84 (123)
T ss_dssp             SSCCEEESCCC
T ss_pred             CCCeEEEEecC
Confidence            66666665553

>d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: Positive regulator of the amidase operon AmiR
domain: Positive regulator of the amidase operon AmiR
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.40  E-value=0.66  Score=33.04  Aligned_cols=84  Identities=8%  Similarity=-0.001  Sum_probs=55.3

Q ss_pred             cccccccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485            4 NLMLRRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus         4 ~~~~~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      +.|+.++.+..+||.--.....+.+...|.+.|++|..+....+.++.           ..++.+..+++-. ..... +
T Consensus         3 ~~~~~~l~~~~iLvvdd~~~~~~~l~~~L~~~G~~v~~~~~~~~al~~-----------~~Dlvl~D~~mp~-~~~~~-~   69 (189)
T d1qo0d_           3 NSLLGSLRELQVLVLNPPGEVSDALVLQLIRIGCSVRQCWPPPEAFDV-----------PVDVVFTSIFQNR-HHDEI-A   69 (189)
T ss_dssp             HHHHHTGGGCEEEEESCTTHHHHHHHHHHHHHTCEEEEECSCCSSCSS-----------CCSEEEEECCSST-HHHHH-H
T ss_pred             hHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCcceecCCHHHhccC-----------CCCEEEEcCCCCC-cHHHH-H
Confidence            345668889999999999999999999999999999888655543321           1224444444322 23333 3


Q ss_pred             HHHHHHcCCccEEEeCC
Q 044485           84 NTAVTQYGKLDIMFNNA  100 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~a  100 (257)
                      ....+..+.+-+|+..+
T Consensus        70 ~~~~~~~p~~pvI~lta   86 (189)
T d1qo0d_          70 ALLAAGTPRTTLVALVE   86 (189)
T ss_dssp             HHHHHSCTTCEEEEEEC
T ss_pred             HHHHHcCCCCCEEEEec
Confidence            34455555566666644

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=85.28  E-value=0.31  Score=36.87  Aligned_cols=32  Identities=16%  Similarity=0.267  Sum_probs=28.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      .|+|.|| |--|...|.+|+++|++|+++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            5889988 7889999999999999999997653

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.03  E-value=0.43  Score=35.15  Aligned_cols=34  Identities=29%  Similarity=0.470  Sum_probs=30.1

Q ss_pred             CcEEEEecCCCchHH-----HHHHHHHHcCCeEEEeeCc
Q 044485           12 GKVALITGGARGIGE-----CTARLFSKHGAKVLIADIK   45 (257)
Q Consensus        12 ~k~~lItGas~giG~-----~ia~~l~~~g~~Vi~~~r~   45 (257)
                      +|++.|+|+-||.|+     ++|..|+++|.+|.+++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            689999999999997     5788899999999999865

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=84.80  E-value=1.6  Score=30.04  Aligned_cols=45  Identities=16%  Similarity=0.176  Sum_probs=31.6

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHc--CCeEEEee--CcchhhHhHHHHh
Q 044485           12 GKVALITGGARGIGECTARLFSKH--GAKVLIAD--IKDDLGESVCKDI   56 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~--g~~Vi~~~--r~~~~~~~~~~~~   56 (257)
                      -|++.|-|+||.||.....-+.+.  .++|+..+  ++.+.+.+...+.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef   50 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRT   50 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhh
Confidence            389999999999999999988775  57765543  3334444444443

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=84.69  E-value=0.44  Score=36.79  Aligned_cols=31  Identities=26%  Similarity=0.422  Sum_probs=27.6

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485           15 ALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus        15 ~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      |+|.|+ |..|...|..++++|++|+++.+..
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            788887 8899999999999999999998754

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=84.57  E-value=1.5  Score=36.39  Aligned_cols=80  Identities=15%  Similarity=0.126  Sum_probs=50.7

Q ss_pred             ccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485            9 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus         9 ~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      .+.||++.|.|+ +....++++.|.+.|..|+.++-.....+. .+.+....+..    .+..|=.|...+.+.+++.  
T Consensus       342 ~l~Gkrv~i~~~-~~~~~~l~~~l~elGmevv~~~~~~~~~~d-~~~~~~~~~~~----~~i~~d~~~~el~~~i~~~--  413 (477)
T d1m1na_         342 RLEGKRVMLYIG-GLRPRHVIGAYEDLGMEVVGTGYEFAHNDD-YDRTMKEMGDS----TLLYDDVTGYEFEEFVKRI--  413 (477)
T ss_dssp             HHTTCEEEECBS-SSHHHHTHHHHHTTTCEEEEEEESSCCHHH-HHTTTTTSCTT----CEEEESCBHHHHHHHHHHH--
T ss_pred             hhcCCcEEEecC-chhHHHHHHHHHHCCCEEEEEeecCCChHH-HHHHHHhcCCC----cEEecCCCHHHHHHHHHhc--
Confidence            578999999876 568899999998899998777644332222 22222221111    1223434666777777654  


Q ss_pred             HcCCccEEEeC
Q 044485           89 QYGKLDIMFNN   99 (257)
Q Consensus        89 ~~~~id~lv~~   99 (257)
                         ++|+++-+
T Consensus       414 ---~pDL~ig~  421 (477)
T d1m1na_         414 ---KPDLIGSG  421 (477)
T ss_dssp             ---CCSEEEEC
T ss_pred             ---CCCEEEEC
Confidence               69999855

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=84.35  E-value=1.8  Score=29.21  Aligned_cols=86  Identities=12%  Similarity=0.190  Sum_probs=55.3

Q ss_pred             CCcEEEEecCC---CchHHHHHHHHHHcCCeEEEeeCcchh----hHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHH
Q 044485           11 QGKVALITGGA---RGIGECTARLFSKHGAKVLIADIKDDL----GESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAV   83 (257)
Q Consensus        11 ~~k~~lItGas---~giG~~ia~~l~~~g~~Vi~~~r~~~~----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~   83 (257)
                      +-|++.|.|+|   +..|..+++.|.+.|++++.+--+...    -..+...+.+...   .+..+.+ +..++.+..++
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~---~iD~v~v-~~p~~~v~~~v   87 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKE---PVDILDV-FRPPSALMDHL   87 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCS---CCSEEEE-CSCHHHHTTTH
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccC---CCceEEE-eccHHHHHHHH
Confidence            56899999999   669999999999999998877543211    1112222222221   1333333 33678888888


Q ss_pred             HHHHHHcCCccEEEeCCCC
Q 044485           84 NTAVTQYGKLDIMFNNAGT  102 (257)
Q Consensus        84 ~~~~~~~~~id~lv~~ag~  102 (257)
                      +++.+.  ++..++...|.
T Consensus        88 ~~~~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          88 PEVLAL--RPGLVWLQSGI  104 (136)
T ss_dssp             HHHHHH--CCSCEEECTTC
T ss_pred             HHHHhh--CCCeEEEecCc
Confidence            888766  46667776664

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.26  E-value=0.43  Score=37.03  Aligned_cols=34  Identities=24%  Similarity=0.300  Sum_probs=29.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      .-++|.|| |--|..+|++|++.|.+|.+..++..
T Consensus         2 ~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           2 YDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             ccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            35889987 88899999999999999999877653

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=84.08  E-value=2.1  Score=32.16  Aligned_cols=78  Identities=9%  Similarity=0.061  Sum_probs=54.3

Q ss_pred             cCCcEEEEecCCCch-HHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHH
Q 044485           10 LQGKVALITGGARGI-GECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVT   88 (257)
Q Consensus        10 ~~~k~~lItGas~gi-G~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~   88 (257)
                      -.|.+||=.|+++|. ...+++.+ ..+..|+.++++++.++.+.+.++..... ..+.+...|+.+.-      .    
T Consensus        84 ~pG~rVLEiG~GsG~lt~~la~~v-~~~g~V~~vD~~e~~~~~A~~n~~~~~~~-~nv~~~~~Di~~~~------~----  151 (250)
T d1yb2a1          84 RPGMDILEVGVGSGNMSSYILYAL-NGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFI------S----  151 (250)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHH-TTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCC------C----
T ss_pred             CCcCEEEEeeeeCcHHHHHHHHHh-CCCcEEEEEECCHHHHHHHHHHHHHhcCC-CceEEEEeeeeccc------c----
Confidence            367899999988763 44444444 34568999999999988888877654332 34888889987531      0    


Q ss_pred             HcCCccEEEeCC
Q 044485           89 QYGKLDIMFNNA  100 (257)
Q Consensus        89 ~~~~id~lv~~a  100 (257)
                       -..+|.++.+.
T Consensus       152 -~~~fD~V~ld~  162 (250)
T d1yb2a1         152 -DQMYDAVIADI  162 (250)
T ss_dssp             -SCCEEEEEECC
T ss_pred             -cceeeeeeecC
Confidence             13689998764

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=84.01  E-value=2.3  Score=27.72  Aligned_cols=82  Identities=13%  Similarity=0.076  Sum_probs=54.9

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcC
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYG   91 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~   91 (257)
                      +|++||.--..-+-..+...|.+.|++|..+....+.++.+.+.-       .++..+...+-+.+.. .++.++++...
T Consensus         2 ~krILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~al~~l~~~~-------~dlillD~~mp~~~G~-~~~~~~r~~~~   73 (121)
T d1mvoa_           2 NKKILVVDDEESIVTLLQYNLERSGYDVITASDGEEALKKAETEK-------PDLIVLDVMLPKLDGI-EVCKQLRQQKL   73 (121)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHHC-------CSEEEEESSCSSSCHH-HHHHHHHHTTC
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHhccc-------ccEEEecccccCCCCc-hhhhhhhccCC
Confidence            378999999999999999999999999887655554444443321       2255555555555544 45667776655


Q ss_pred             CccEEEeCCC
Q 044485           92 KLDIMFNNAG  101 (257)
Q Consensus        92 ~id~lv~~ag  101 (257)
                      .+.+++..+.
T Consensus        74 ~~~ii~lt~~   83 (121)
T d1mvoa_          74 MFPILMLTAK   83 (121)
T ss_dssp             CCCEEEEECT
T ss_pred             CCEEEEEEee
Confidence            5666665543

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.90  E-value=0.46  Score=34.92  Aligned_cols=34  Identities=21%  Similarity=0.332  Sum_probs=29.5

Q ss_pred             cEEEEecCCCchHH-----HHHHHHHHcCCeEEEeeCcc
Q 044485           13 KVALITGGARGIGE-----CTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus        13 k~~lItGas~giG~-----~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      |++.|+++-||.|+     ++|..|+++|.+|.+++-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            89999999999997     56788999999999987653

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=83.59  E-value=0.63  Score=34.84  Aligned_cols=37  Identities=24%  Similarity=0.342  Sum_probs=30.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHh
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGES   51 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~   51 (257)
                      -++|.|| |.-|...|..|+++|.+|+++.++.....+
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G~k   42 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIGRK   42 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCHH
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCCCc
Confidence            4788887 888999999999999999999988654433

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=83.02  E-value=4.4  Score=31.06  Aligned_cols=30  Identities=13%  Similarity=-0.013  Sum_probs=24.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEee
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIAD   43 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~   43 (257)
                      ..+|+..+|..|.++|..-+..|..++++.
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~   99 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIPAKIIM   99 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             ceeeeeccchhhHHHHHhhcccccceeecc
Confidence            458888899999999999999998854443

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=82.98  E-value=0.31  Score=33.66  Aligned_cols=40  Identities=10%  Similarity=0.042  Sum_probs=28.7

Q ss_pred             EecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhc
Q 044485           17 ITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIG   57 (257)
Q Consensus        17 ItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~   57 (257)
                      +.| +|-+|+++++.|.+.+..+.+.+|+.++.+++.++..
T Consensus         4 fIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~   43 (153)
T d2i76a2           4 FVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYG   43 (153)
T ss_dssp             EES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTC
T ss_pred             EEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccc
Confidence            344 5889999999987644445678999999988887764

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=82.75  E-value=0.76  Score=33.04  Aligned_cols=38  Identities=21%  Similarity=0.216  Sum_probs=30.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHH
Q 044485           14 VALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVC   53 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~   53 (257)
                      ++.|.| .|-+|..+|..|+ +|++|+..+-+++..+++.
T Consensus         2 kI~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHH
T ss_pred             EEEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHHh
Confidence            466666 6999999998775 6999999998887665553

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.24  E-value=0.85  Score=33.36  Aligned_cols=78  Identities=13%  Similarity=0.141  Sum_probs=52.0

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHc
Q 044485           11 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQY   90 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~   90 (257)
                      .|.+||=.|++.|.-......+...| .|+.++-++..++.+.+..+...    .+.++..|..+++.-...       +
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~~----ni~~i~~d~~~~~~~~~~-------~  123 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRERN----NIIPLLFDASKPWKYSGI-------V  123 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHCS----SEEEECSCTTCGGGTTTT-------C
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhccC----CceEEEeeccCccccccc-------c
Confidence            47899999999885444333333334 89999999988887776655433    277888888876543222       2


Q ss_pred             CCccEEEeCC
Q 044485           91 GKLDIMFNNA  100 (257)
Q Consensus        91 ~~id~lv~~a  100 (257)
                      ..+|++++..
T Consensus       124 ~~vd~v~~~~  133 (209)
T d1nt2a_         124 EKVDLIYQDI  133 (209)
T ss_dssp             CCEEEEEECC
T ss_pred             ceEEEEEecc
Confidence            3577776653

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=81.88  E-value=4.7  Score=31.14  Aligned_cols=32  Identities=25%  Similarity=0.266  Sum_probs=23.3

Q ss_pred             cEEEEecCCCchHH---HHHHHHHHcCCeEEEeeC
Q 044485           13 KVALITGGARGIGE---CTARLFSKHGAKVLIADI   44 (257)
Q Consensus        13 k~~lItGas~giG~---~ia~~l~~~g~~Vi~~~r   44 (257)
                      |+++.++||+|-=.   ++|++|+++|++|++++.
T Consensus         2 ril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           2 RVLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            45555777655433   489999999999888763

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.72  E-value=0.86  Score=34.87  Aligned_cols=33  Identities=21%  Similarity=0.311  Sum_probs=27.5

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCc
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIK   45 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~   45 (257)
                      .++|+|.|| |--|...|..|+++|++|+++-++
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            356899987 777899999999999999987543

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=81.66  E-value=0.86  Score=33.25  Aligned_cols=38  Identities=13%  Similarity=0.182  Sum_probs=32.6

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcc
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD   46 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~   46 (257)
                      .++.||+|+|.|+ |--|..+|..++..++.++...|..
T Consensus        28 ~~~~gK~V~VvG~-G~Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          28 VDFSGQRVGVIGT-GSSGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCCBTCEEEEECC-SHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCCEEEEECC-CccHHHHHHHHHhhhcccccccccc
Confidence            3689999999987 5569999999999999988887765

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.57  E-value=0.44  Score=34.00  Aligned_cols=35  Identities=14%  Similarity=0.109  Sum_probs=30.0

Q ss_pred             CcEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcch
Q 044485           12 GKVALITGGARGIGECTARLFSKHGAKVLIADIKDD   47 (257)
Q Consensus        12 ~k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~   47 (257)
                      ++.++|.|| |..|...|..+++.|.+|+++.|...
T Consensus         5 ~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~~   39 (190)
T d1trba1           5 HSKLLILGS-GPAGYTAAVYAARANLQPVLITGMEK   39 (190)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSST
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeecc
Confidence            578999988 77999999999999999998876543

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=81.55  E-value=1.7  Score=28.33  Aligned_cols=81  Identities=7%  Similarity=-0.014  Sum_probs=54.1

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCC
Q 044485           13 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGK   92 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~   92 (257)
                      .++||.--...+...+...|.+.|+.|..+....+.++.+.+..      ..++..+...+-+.+ --++++++++....
T Consensus         3 ~rILvVdDd~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~------~~dliilD~~lp~~~-G~el~~~ir~~~~~   75 (118)
T d2b4aa1           3 FRVTLVEDEPSHATLIQYHLNQLGAEVTVHPSGSAFFQHRSQLS------TCDLLIVSDQLVDLS-IFSLLDIVKEQTKQ   75 (118)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHTGGGGG------SCSEEEEETTCTTSC-HHHHHHHHTTSSSC
T ss_pred             CEEEEEECCHHHHHHHHHHHHhcCCCeEEECCHHHHHHHHHhcC------CCCEEEEeCCCCCCC-HHHHHHHHHhcCCC
Confidence            57999999999999999999999999987765444433332211      112555555555544 44667788776556


Q ss_pred             ccEEEeCC
Q 044485           93 LDIMFNNA  100 (257)
Q Consensus        93 id~lv~~a  100 (257)
                      +-+++..+
T Consensus        76 ~pii~lt~   83 (118)
T d2b4aa1          76 PSVLILTT   83 (118)
T ss_dssp             CEEEEEES
T ss_pred             CcEEEEEC
Confidence            66776654

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=80.78  E-value=0.68  Score=33.99  Aligned_cols=32  Identities=25%  Similarity=0.402  Sum_probs=26.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEeeCcc
Q 044485           14 VALITGGARGIGECTARLFSKHGA-KVLIADIKD   46 (257)
Q Consensus        14 ~~lItGas~giG~~ia~~l~~~g~-~Vi~~~r~~   46 (257)
                      .|+|.|| |--|...|..|+++|. +|+++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            4788887 7889999999999996 699887653

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=80.61  E-value=1.6  Score=32.13  Aligned_cols=83  Identities=13%  Similarity=0.127  Sum_probs=55.7

Q ss_pred             CCcEEEEecCCCchHHHHHHHHHHc-C----CeEEEeeCcchhhHhHHHHhccCC---CCCCCceeEecCCCCHHHHHHH
Q 044485           11 QGKVALITGGARGIGECTARLFSKH-G----AKVLIADIKDDLGESVCKDIGSSS---SSASGCSYVHCDVTKEKDIENA   82 (257)
Q Consensus        11 ~~k~~lItGas~giG~~ia~~l~~~-g----~~Vi~~~r~~~~~~~~~~~~~~~~---~~~~~v~~~~~D~~~~~~v~~~   82 (257)
                      .+.+||..|+++|.-.++..+++.. |    .+|+.+.++++..+...+.+....   .....+.++..|..+-      
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~------  153 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG------  153 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc------
Confidence            5789999999999999888888653 5    479999998876655544322100   0001277788887531      


Q ss_pred             HHHHHHHcCCccEEEeCCCCC
Q 044485           83 VNTAVTQYGKLDIMFNNAGTV  103 (257)
Q Consensus        83 ~~~~~~~~~~id~lv~~ag~~  103 (257)
                          ....++.|.|+.+++..
T Consensus       154 ----~~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         154 ----YPPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             ----CGGGCSEEEEEECSCBS
T ss_pred             ----cccccceeeEEEEeech
Confidence                11235799999988864

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=80.43  E-value=2.4  Score=30.10  Aligned_cols=76  Identities=14%  Similarity=0.111  Sum_probs=49.9

Q ss_pred             EecCCCchHHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 044485           17 ITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTKEKDIENAVNTAVTQYGKLDIM   96 (257)
Q Consensus        17 ItGas~giG~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~~~~~id~l   96 (257)
                      +..+|-|-|-+ .+.+++++.+|+..+|+++.++.+.+. ..     .++..++.++++.+..   +...  ..+.+|.+
T Consensus        22 ~vD~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~~-~~-----~~~~~~~~~f~~~~~~---l~~~--~~~~vdgI   89 (182)
T d1wg8a2          22 YVDATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKGL-HL-----PGLTVVQGNFRHLKRH---LAAL--GVERVDGI   89 (182)
T ss_dssp             EEETTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHHT-CC-----TTEEEEESCGGGHHHH---HHHT--TCSCEEEE
T ss_pred             EEEeCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhhc-cc-----cceeEeehHHHHHHHH---HHHc--CCCccCEE
Confidence            34556555555 455566778999999999877655432 11     2388899888875443   3222  12579999


Q ss_pred             EeCCCCCC
Q 044485           97 FNNAGTVD  104 (257)
Q Consensus        97 v~~ag~~~  104 (257)
                      +..-|+..
T Consensus        90 l~DLGvSs   97 (182)
T d1wg8a2          90 LADLGVSS   97 (182)
T ss_dssp             EEECSCCH
T ss_pred             EEEccCCH
Confidence            99998753

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=80.29  E-value=1.1  Score=33.15  Aligned_cols=39  Identities=23%  Similarity=0.247  Sum_probs=31.5

Q ss_pred             cccCCcEEEEecCCCchHHHHHHHHHHc--------------------CCe-EEEeeCcch
Q 044485            8 RRLQGKVALITGGARGIGECTARLFSKH--------------------GAK-VLIADIKDD   47 (257)
Q Consensus         8 ~~~~~k~~lItGas~giG~~ia~~l~~~--------------------g~~-Vi~~~r~~~   47 (257)
                      .++++|.|+|.|+ |..+.-+|+-+++.                    |+. |.+++|+..
T Consensus        35 ~~~~gk~VvVIGg-GNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg~   94 (225)
T d1cjca1          35 PDLSCDTAVILGQ-GNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP   94 (225)
T ss_dssp             CCTTSSEEEEESC-SHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred             ccccCceEEEECC-chhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcCh
Confidence            4678999999987 89999999999873                    654 888887754

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=80.18  E-value=1.6  Score=31.89  Aligned_cols=65  Identities=15%  Similarity=0.135  Sum_probs=45.2

Q ss_pred             cCCcEEEEecCCCch-HHHHHHHHHHcCCeEEEeeCcchhhHhHHHHhccCCCCCCCceeEecCCCC
Q 044485           10 LQGKVALITGGARGI-GECTARLFSKHGAKVLIADIKDDLGESVCKDIGSSSSSASGCSYVHCDVTK   75 (257)
Q Consensus        10 ~~~k~~lItGas~gi-G~~ia~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~   75 (257)
                      ..+.++|=.|++.|- ...+++.+...+++|+.++-+++.++.+.+.+...... ..+.....|..+
T Consensus        38 ~~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~-~~~~~~~~d~~~  103 (225)
T d1im8a_          38 TADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSE-IPVEILCNDIRH  103 (225)
T ss_dssp             CTTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCS-SCEEEECSCTTT
T ss_pred             CCCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhccc-chhhhccchhhc
Confidence            356789999987664 45566665567899999999999998888776543322 235556666543

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.14  E-value=1.2  Score=30.34  Aligned_cols=32  Identities=13%  Similarity=0.274  Sum_probs=25.4

Q ss_pred             cEEEEecCCCchHHHHHHHHHHcC---CeEEEeeC
Q 044485           13 KVALITGGARGIGECTARLFSKHG---AKVLIADI   44 (257)
Q Consensus        13 k~~lItGas~giG~~ia~~l~~~g---~~Vi~~~r   44 (257)
                      .+|.|.||||..|..+.+.|.+++   .++..++.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s   37 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLAS   37 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEee
Confidence            468999999999999999998655   34655543