BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044494
(144 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 95.9 bits (237), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVG-LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
L+Y YM GS+ LR E+ LDW KR I G A L+YLH C P I+HRD
Sbjct: 111 LLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKA 170
Query: 66 XXXXXXXXXXAFVADFGVARLLNF-DSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
A V DFG+A+L+++ D + GT G+IAPE T +EK+DV+ +G
Sbjct: 171 ANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYG 230
Query: 125 VVALEVLMGKH 135
V+ LE++ G+
Sbjct: 231 VMLLELITGQR 241
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 93.6 bits (231), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVG-LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
L+Y YM GS+ LR E+ LDW KR I G A L+YLH C P I+HRD
Sbjct: 103 LLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKA 162
Query: 66 XXXXXXXXXXAFVADFGVARLLNF-DSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
A V DFG+A+L+++ D + G G+IAPE T +EK+DV+ +G
Sbjct: 163 ANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYG 222
Query: 125 VVALEVLMGKH 135
V+ LE++ G+
Sbjct: 223 VMLLELITGQR 233
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVL-RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHR 61
R M LIY+YME G+L L +D + + W +R+ I G A L YLH T I+HR
Sbjct: 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHR 163
Query: 62 DXXXXXXXXXXXXXAFVADFGVARL-LNFDSSN-RTLLAGTYGYIAPELAYTMVVTEKSD 119
D + DFG+++ D ++ ++ GT GYI PE +TEKSD
Sbjct: 164 DVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSD 223
Query: 120 VYSFGVVALEVLMGK 134
VYSFGVV EVL +
Sbjct: 224 VYSFGVVLFEVLCAR 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVL-RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHR 61
R M LIY+YME G+L L +D + + W +R+ I G A L YLH T I+HR
Sbjct: 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHR 163
Query: 62 DXXXXXXXXXXXXXAFVADFGVARLLN--FDSSNRTLLAGTYGYIAPELAYTMVVTEKSD 119
D + DFG+++ + ++ GT GYI PE +TEKSD
Sbjct: 164 DVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSD 223
Query: 120 VYSFGVVALEVLMGK 134
VYSFGVV EVL +
Sbjct: 224 VYSFGVVLFEVLCAR 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ EY+ GSL+ +L LD +R+++ +A ++YLH+ PPIVHRD
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPN 169
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVA 127
V DFG++RL AGT ++APE+ EKSDVYSFGV+
Sbjct: 170 LLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVIL 229
Query: 128 LEVLMGKHP 136
E+ + P
Sbjct: 230 WELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 72.4 bits (176), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ EY+ GSL+ +L LD +R+++ +A ++YLH+ PPIVHR+
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPN 169
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVA 127
V DFG++RL + AGT ++APE+ EKSDVYSFGV+
Sbjct: 170 LLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVIL 229
Query: 128 LEVLMGKHP 136
E+ + P
Sbjct: 230 WELATLQQP 238
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 69.3 bits (168), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
L+Y YM GSL L + L W R I +G A+ +++LH + +HRD
Sbjct: 107 LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSAN 163
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
A ++DFG+AR + + + GT Y+APE A +T KSD+YSFGV
Sbjct: 164 ILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGV 222
Query: 126 VALEVLMG 133
V LE++ G
Sbjct: 223 VLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
L+Y YM GSL L + L W R I +G A+ +++LH + +HRD
Sbjct: 107 LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSAN 163
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
A ++DFG+AR + + GT Y+APE A +T KSD+YSFGV
Sbjct: 164 ILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGV 222
Query: 126 VALEVLMG 133
V LE++ G
Sbjct: 223 VLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
L+Y YM GSL L + L W R I +G A+ +++LH + +HRD
Sbjct: 101 LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSAN 157
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
A ++DFG+AR + + GT Y+APE A +T KSD+YSFGV
Sbjct: 158 ILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGV 216
Query: 126 VALEVLMG 133
V LE++ G
Sbjct: 217 VLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
L+Y Y GSL L + L W R I +G A+ +++LH + +HRD
Sbjct: 98 LVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSAN 154
Query: 68 XXXXXXXXAFVADFGVARLLN--FDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
A ++DFG+AR + + GT Y APE A +T KSD+YSFGV
Sbjct: 155 ILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGV 213
Query: 126 VALEVLMG 133
V LE++ G
Sbjct: 214 VLLEIITG 221
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 86 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 139
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 140 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 198 LCYEFLVGKPPFE 210
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 88 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 141
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 142 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 200 LCYEFLVGKPPFE 212
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 83 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 136
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 137 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 195 LCYEFLVGKPPFE 207
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 100 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 153
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 154 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 211
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 212 LCYEFLVGKPPFE 224
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 82 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 135
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 136 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 193
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 194 LCYEFLVGKPPFE 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 83 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 136
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 137 ENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 195 LCYEFLVGKPPFE 207
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 86 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 139
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 140 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 198 LCYEFLVGKPPFE 210
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 80 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 133
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 134 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 191
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 192 LCYEFLVGKPPFE 204
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 109 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 162
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 163 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 220
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 221 LCYEFLVGKPPFE 233
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 84 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 137
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + + SS RT L+GT Y+ PE+ + EK D++S GV
Sbjct: 138 ENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGV 195
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 196 LCYEFLVGKPPFE 208
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 87 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 140
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 141 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 199 LCYEFLVGKPPFE 211
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 83 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 136
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 137 ENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 195 LCYEFLVGKPPFE 207
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 83 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 136
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 137 ENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 195 LCYEFLVGKPPFE 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 84 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 137
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 138 ENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 195
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 196 LCYEFLVGKPPFE 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 88 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 141
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 142 ENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 200 LCYEFLVGKPPFE 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 83 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 136
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 137 ENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 195 LCYEFLVGKPPFE 207
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 62.8 bits (151), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + I EY++ G+L ++++ + W++RV+ K +A ++YLH + I+HRD
Sbjct: 80 KRLNFITEYIKGGTLRGIIKSMDSQ--YPWSQRVSFAKDIASGMAYLH---SMNIIHRDL 134
Query: 64 XXXXXXXXXXXXAFVADFGVARLL--------------NFDSSNRTLLAGTYGYIAPELA 109
VADFG+ARL+ D R + G ++APE+
Sbjct: 135 NSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI 194
Query: 110 YTMVVTEKSDVYSFGVVALEVL 131
EK DV+SFG+V E++
Sbjct: 195 NGRSYDEKVDVFSFGIVLCEII 216
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 62.8 bits (151), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 88 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 141
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE EK D++S GV
Sbjct: 142 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGV 199
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 200 LCYEFLVGKPPFE 212
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 85 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 138
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+A+FG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 139 ENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 196
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 197 LCYEFLVGKPPFE 209
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY G ++ L ++ D + + +A+ALSY H + ++HRD
Sbjct: 88 VYLILEYAPRGEVYKEL---QKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 141
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 142 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 200 LCYEFLVGKPPFE 212
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 83 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKKVIHRDIKP 136
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS R L GT Y+ PE+ + EK D++S GV
Sbjct: 137 ENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 195 LCYEFLVGKPPFE 207
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 86 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 139
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+A+FG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 140 ENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 198 LCYEFLVGKPPFE 210
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 85 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 138
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS R L GT Y+ PE+ + EK D++S GV
Sbjct: 139 ENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 196
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 197 LCYEFLVGKPPFE 209
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 86 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 139
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS R L GT Y+ PE+ + EK D++S GV
Sbjct: 140 ENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 198 LCYEFLVGKPPFE 210
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 84 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 137
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS R L GT Y+ PE+ + EK D++S GV
Sbjct: 138 ENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 195
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 196 LCYEFLVGKPPFE 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 86 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 139
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS R L GT Y+ PE+ + EK D++S GV
Sbjct: 140 ENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 198 LCYEFLVGKPPFE 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 83 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 136
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS R L GT Y+ PE+ + EK D++S GV
Sbjct: 137 ENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 195 LCYEFLVGKPPFE 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 83 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 136
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS R L GT Y+ PE+ + EK D++S GV
Sbjct: 137 ENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 195 LCYEFLVGKPPFE 207
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 87 VYLILEYAPLGTVY---RELQKLSRFDEQRTATYITELANALSYCH---SKRVIHRDIKP 140
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS RT L GT Y+ PE+ + EK D++S GV
Sbjct: 141 ENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 126 VALEVLMGKHPGE 138
+ E L+G P E
Sbjct: 199 LCYEFLVGMPPFE 211
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 109 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 162
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS R L GT Y+ PE+ + EK D++S GV
Sbjct: 163 ENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 220
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 221 LCYEFLVGKPPFE 233
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 86 VYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 139
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS R L GT Y+ PE+ + EK D++S GV
Sbjct: 140 ENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 198 LCYEFLVGKPPFE 210
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY G ++ L ++ D + + +A+ALSY H + ++HRD
Sbjct: 88 VYLILEYAPRGEVYKEL---QKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKP 141
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS R L GT Y+ PE+ + EK D++S GV
Sbjct: 142 ENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 126 VALEVLMGKHPGE 138
+ E L+GK P E
Sbjct: 200 LCYEFLVGKPPFE 212
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I EY+ GS +L E LD + I++ + L YLH + +HRD
Sbjct: 95 LWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKK---IHRDIKA 147
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFGVA L R GT ++APE+ K+D++S G+
Sbjct: 148 ANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGI 207
Query: 126 VALEVLMGKHP 136
A+E+ G+ P
Sbjct: 208 TAIELARGEPP 218
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I EY+ GS +L E LD + I++ + L YLH + +HRD
Sbjct: 80 LWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKK---IHRDIKA 132
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFGVA L R GT ++APE+ K+D++S G+
Sbjct: 133 ANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGI 192
Query: 126 VALEVLMGKHP 136
A+E+ G+ P
Sbjct: 193 TAIELARGEPP 203
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I EY+ GS +L E LD + I++ + L YLH + +HRD
Sbjct: 80 LWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKK---IHRDIKA 132
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFGVA L R GT ++APE+ K+D++S G+
Sbjct: 133 ANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGI 192
Query: 126 VALEVLMGKHP 136
A+E+ G+ P
Sbjct: 193 TAIELARGEPP 203
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I EY+ GS +L E LD + I++ + L YLH + +HRD
Sbjct: 100 LWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKK---IHRDIKA 152
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFGVA L R GT ++APE+ K+D++S G+
Sbjct: 153 ANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGI 212
Query: 126 VALEVLMGKHP 136
A+E+ G+ P
Sbjct: 213 TAIELARGEPP 223
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I EY+ GS +LR A D + ++K + L YLH + +HRD
Sbjct: 96 LWIIMEYLGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHSEKK---IHRDIKA 148
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFGVA L R GT ++APE+ K+D++S G+
Sbjct: 149 ANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGI 208
Query: 126 VALEVLMGKHP 136
A+E+ G+ P
Sbjct: 209 TAIELAKGEPP 219
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ ++LI EY G L+ L +++ D + I++ +A AL Y H ++HRD
Sbjct: 95 RRRIYLILEYAPRGELYKEL---QKSCTFDEQRTATIMEELADALMYCHGK---KVIHRD 148
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
+ADFG + ++ S R + GT Y+ PE+ + EK D++
Sbjct: 149 IKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWC 206
Query: 123 FGVVALEVLMGKHPGE 138
GV+ E+L+G P E
Sbjct: 207 IGVLCYELLVGNPPFE 222
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY +G+++ R ++ D + + +A+ALSY H + ++HRD
Sbjct: 87 VYLILEYAPLGTVY---RELQKLSRFDEQRTATYITELANALSYCH---SKRVIHRDIKP 140
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG + ++ SS R L GT Y+ PE+ + EK D++S GV
Sbjct: 141 ENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 126 VALEVLMGKHPGE 138
+ E L+G P E
Sbjct: 199 LCYEFLVGMPPFE 211
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 1 LHRKCMFLIYEYMEMGSLFCVL--RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
L + L+ E+ G L VL + + ++WA V I +GM +YLH + PI
Sbjct: 76 LKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWA--VQIARGM----NYLHDEAIVPI 129
Query: 59 VHRDXXXXXXXXXXXXXA--------FVADFGVARLLNFDSSNRTLLAGTYGYIAPELAY 110
+HRD + DFG+AR + + + AG Y ++APE+
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHRTTKMSAAGAYAWMAPEVIR 187
Query: 111 TMVVTEKSDVYSFGVVALEVLMGKHP 136
+ ++ SDV+S+GV+ E+L G+ P
Sbjct: 188 ASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKR-VNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++ EY++ +L ++ T+ G KR + ++ AL++ H + I+HRD
Sbjct: 92 YIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 144
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLA---GTYGYIAPELAYTMVVTEKSDVYS 122
V DFG+AR + ++ T A GT Y++PE A V +SDVYS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 123 FGVVALEVLMGKHP 136
G V EVL G+ P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKR-VNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++ EY++ +L ++ T+ G KR + ++ AL++ H + I+HRD
Sbjct: 92 YIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 144
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLA---GTYGYIAPELAYTMVVTEKSDVYS 122
V DFG+AR + ++ T A GT Y++PE A V +SDVYS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 123 FGVVALEVLMGKHP 136
G V EVL G+ P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKR-VNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++ EY++ +L ++ T+ G KR + ++ AL++ H + I+HRD
Sbjct: 92 YIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 144
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNR----TLLAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG+AR + DS N + GT Y++PE A V +SDVY
Sbjct: 145 ANILISATNAVKVVDFGIARAI-ADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 122 SFGVVALEVLMGKHP 136
S G V EVL G+ P
Sbjct: 204 SLGCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKR-VNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++ EY++ +L ++ T+ G KR + ++ AL++ H + I+HRD
Sbjct: 92 YIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 144
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLA---GTYGYIAPELAYTMVVTEKSDVYS 122
V DFG+AR + ++ T A GT Y++PE A V +SDVYS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 123 FGVVALEVLMGKHP 136
G V EVL G+ P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKR-VNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++ EY++ +L ++ T+ G KR + ++ AL++ H + I+HRD
Sbjct: 92 YIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 144
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLA---GTYGYIAPELAYTMVVTEKSDVYS 122
V DFG+AR + ++ T A GT Y++PE A V +SDVYS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 123 FGVVALEVLMGKHP 136
G V EVL G+ P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKR-VNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++ EY++ +L ++ T+ G KR + ++ AL++ H + I+HRD
Sbjct: 109 YIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 161
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLA---GTYGYIAPELAYTMVVTEKSDVYS 122
V DFG+AR + ++ T A GT Y++PE A V +SDVYS
Sbjct: 162 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 221
Query: 123 FGVVALEVLMGKHP 136
G V EVL G+ P
Sbjct: 222 LGCVLYEVLTGEPP 235
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 11/137 (8%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+ +I E+ME GSL LR ++ + + V +++G+A + YL VHRD
Sbjct: 109 VMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL---ADMNYVHRDLAA 163
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI-----APELAYTMVVTEKSDV 120
V+DFG++R L D+S+ T + G I APE T SDV
Sbjct: 164 RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDV 223
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 224 WSYGIVMWEVMSYGERP 240
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 6 MFLIYEYMEMGSLFCVL-RTDEEAVGLDWAKRVNIVKGMAHALSYLHH--DCTPPIVHRD 62
++++ EY E G L V+ + +E LD + ++ + AL H D ++HRD
Sbjct: 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD 141
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
+ DFG+AR+LN D+S GT Y++PE M EKSD++S
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 123 FGVVALEV 130
G + E+
Sbjct: 202 LGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 6 MFLIYEYMEMGSLFCVL-RTDEEAVGLDWAKRVNIVKGMAHALSYLHH--DCTPPIVHRD 62
++++ EY E G L V+ + +E LD + ++ + AL H D ++HRD
Sbjct: 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD 141
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
+ DFG+AR+LN D+S GT Y++PE M EKSD++S
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 123 FGVVALEV 130
G + E+
Sbjct: 202 LGCLLYEL 209
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K M +I EYME G+L LR + + + V +++G+A + YL + VHRD
Sbjct: 119 KPMMIITEYMENGALDKFLREKDGEFSV--LQLVGMLRGIAAGMKYLANMN---YVHRDL 173
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D +G + APE T SDV
Sbjct: 174 AARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDV 233
Query: 121 YSFGVVALEVLM-GKHP 136
+SFG+V EV+ G+ P
Sbjct: 234 WSFGIVMWEVMTYGERP 250
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EY+ GSL V+ +D + + + AL +LH + ++HRD
Sbjct: 92 LWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKS 144
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ DFG + + S R+ + GT ++APE+ K D++S G+
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 126 VALEVLMGKHP 136
+A+E++ G+ P
Sbjct: 205 MAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EY+ GSL V+ +D + + + AL +LH + ++HRD
Sbjct: 93 LWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKS 145
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ DFG + + S R+ + GT ++APE+ K D++S G+
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 126 VALEVLMGKHP 136
+A+E++ G+ P
Sbjct: 206 MAIEMIEGEPP 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EY+ GSL V+ +D + + + AL +LH + ++HRD
Sbjct: 92 LWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKS 144
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ DFG + + S R+ + GT ++APE+ K D++S G+
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 126 VALEVLMGKHP 136
+A+E++ G+ P
Sbjct: 205 MAIEMIEGEPP 215
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 7/132 (5%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I EY+ GS +L+ L+ I++ + L YLH + +HRD
Sbjct: 92 LWIIMEYLGGGSALDLLKPGP----LEETYIATILREILKGLDYLHSERK---IHRDIKA 144
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFGVA L R GT ++APE+ K+D++S G+
Sbjct: 145 ANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGI 204
Query: 126 VALEVLMGKHPG 137
A+E+ G+ P
Sbjct: 205 TAIELAKGEPPN 216
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 6 MFLIYEYMEMGSLFCVL-RTDEEAVGLDWAKRVNIVKGMAHALSYLHH--DCTPPIVHRD 62
++++ EY E G L V+ + +E LD + ++ + AL H D ++HRD
Sbjct: 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD 141
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
+ DFG+AR+LN D GT Y++PE M EKSD++S
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 123 FGVVALEV 130
G + E+
Sbjct: 202 LGCLLYEL 209
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+ +I E+ME GSL LR ++ + + V +++G+A + YL VHR
Sbjct: 83 VMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL---ADMNYVHRALAA 137
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI-----APELAYTMVVTEKSDV 120
V+DFG++R L D+S+ T + G I APE T SDV
Sbjct: 138 RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDV 197
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 198 WSYGIVMWEVMSYGERP 214
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 5 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV--NIVKGMAHALSYLHHDCTPPIVHRD 62
C +L+ EY+E +L + + + +D A I+ G+ HA HD IVHRD
Sbjct: 85 CYYLVMEYIEGPTLSEYIES-HGPLSVDTAINFTNQILDGIKHA-----HDMR--IVHRD 136
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+ L+ S +T + GT Y +PE A E +D+Y
Sbjct: 137 IKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIY 196
Query: 122 SFGVVALEVLMGKHP 136
S G+V E+L+G+ P
Sbjct: 197 SIGIVLYEMLVGEPP 211
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EY+ GSL V+ +D + + + AL +LH + ++HRD
Sbjct: 92 LWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKS 144
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ DFG + + S R+ + GT ++APE+ K D++S G+
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 126 VALEVLMGKHP 136
+A+E++ G+ P
Sbjct: 205 MAIEMIEGEPP 215
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I EYME GSL L+T + L K +++ +A ++++ +HRD
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 63 XXXXXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+ARL+ + + + R + APE T KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ E++ G+ P
Sbjct: 195 SFGILLTEIVTHGRIP 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I EYME GSL L+T + L K +++ +A ++++ +HRD
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 140
Query: 63 XXXXXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+ARL+ + + + R + APE T KSDV+
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ E++ G+ P
Sbjct: 201 SFGILLTEIVTHGRIP 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I EYME GSL L+T + L K +++ +A ++++ +HRD
Sbjct: 87 QEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 142
Query: 63 XXXXXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+ARL+ + + + R + APE T KSDV+
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 202
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ E++ G+ P
Sbjct: 203 SFGILLTEIVTHGRIP 218
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I EYME GSL L+T + L K +++ +A ++++ +HRD
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 63 XXXXXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+ARL+ + + + R + APE T KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ E++ G+ P
Sbjct: 195 SFGILLTEIVTHGRIP 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I EYME GSL L+T + L K +++ +A ++++ +HRD
Sbjct: 88 QEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 143
Query: 63 XXXXXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+ARL+ + + + R + APE T KSDV+
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 203
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ E++ G+ P
Sbjct: 204 SFGILLTEIVTHGRIP 219
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I EYME GSL L+T + L K +++ +A ++++ +HRD
Sbjct: 81 QEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 136
Query: 63 XXXXXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+ARL+ + + + R + APE T KSDV+
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 196
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ E++ G+ P
Sbjct: 197 SFGILLTEIVTHGRIP 212
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EY GS+ ++R + + D + I++ L YLH +HRD
Sbjct: 99 LWIVMEYCGAGSVSDIIRLRNKTLTED--EIATILQSTLKGLEYLHFMRK---IHRDIKA 153
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
A +ADFGVA L + R + GT ++APE+ + +D++S G+
Sbjct: 154 GNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGI 213
Query: 126 VALEVLMGKHP 136
A+E+ GK P
Sbjct: 214 TAIEMAEGKPP 224
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I EYME GSL L+T + L K +++ +A ++++ +HRD
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 63 XXXXXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+ARL+ + + + R + APE T KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ E++ G+ P
Sbjct: 195 SFGILLTEIVTHGRIP 210
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
+ ++ EYME GSL LRT + + + V +++G+ + YL VHRD
Sbjct: 123 RLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYLSDLG---YVHRDL 177
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + APE + SDV
Sbjct: 178 AARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDV 237
Query: 121 YSFGVVALEVLM-GKHP 136
+SFGVV EVL G+ P
Sbjct: 238 WSFGVVMWEVLAYGERP 254
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I EYME GSL L+T + L K +++ +A ++++ +HRD
Sbjct: 80 QEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 135
Query: 63 XXXXXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+ARL+ + + + R + APE T KSDV+
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ E++ G+ P
Sbjct: 196 SFGILLTEIVTHGRIP 211
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + +I EYME GSL LR ++ + + V +++G+ + YL VHRD
Sbjct: 103 KPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSDMSA---VHRDL 157
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + APE T SDV
Sbjct: 158 AARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDV 217
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 218 WSYGIVMWEVMSYGERP 234
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+ ++ E+ME G+L LR ++ + + V +++G+A + YL VHRD
Sbjct: 90 VMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYLAEMS---YVHRDLAA 144
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI-----APELAYTMVVTEKSDV 120
V+DFG++R L +SS+ T + G I APE T SD
Sbjct: 145 RNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDA 204
Query: 121 YSFGVVALEVL-MGKHP 136
+S+G+V EV+ G+ P
Sbjct: 205 WSYGIVMWEVMSFGERP 221
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EY+ GSL V+ +D + + + AL +LH + ++HR+
Sbjct: 93 LWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRNIKS 145
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ DFG + + S R+ + GT ++APE+ K D++S G+
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 126 VALEVLMGKHP 136
+A+E++ G+ P
Sbjct: 206 MAIEMIEGEPP 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I EYME GSL L+T + L K +++ +A ++++ +HRD
Sbjct: 89 QEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 144
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+ARL+ + + R + APE T KSDV+
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 204
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ E++ G+ P
Sbjct: 205 SFGILLTEIVTHGRIP 220
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I EYME GSL L+T + L K +++ +A ++++ +HRD
Sbjct: 84 QEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 139
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+ARL+ + + R + APE T KSDV+
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 199
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ E++ G+ P
Sbjct: 200 SFGILLTEIVTHGRIP 215
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I EYME GSL L+T + L K +++ +A ++++ +HRD
Sbjct: 74 QEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 129
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+ARL+ + + R + APE T KSDV+
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 189
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ E++ G+ P
Sbjct: 190 SFGILLTEIVTHGRIP 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I EYME GSL L+T + L K +++ +A ++++ +HRD
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 140
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+ARL+ + + R + APE T KSDV+
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ E++ G+ P
Sbjct: 201 SFGILLTEIVTHGRIP 216
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 66/134 (49%), Gaps = 13/134 (9%)
Query: 6 MFLIYEYMEMGSLFCVL---RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ E+++ G+L ++ R +EE + + + + AL+YLH ++HRD
Sbjct: 117 LWVLMEFLQGGALTDIVSQVRLNEEQIA-------TVCEAVLQALAYLHAQG---VIHRD 166
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
++DFG ++ D R L GT ++APE+ + + D++S
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWS 226
Query: 123 FGVVALEVLMGKHP 136
G++ +E++ G+ P
Sbjct: 227 LGIMVIEMVDGEPP 240
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
+ ++ EYME GSL LRT + + + V +++G+ + YL VHRD
Sbjct: 123 RLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYLSDLG---YVHRDL 177
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + APE + SDV
Sbjct: 178 AARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDV 237
Query: 121 YSFGVVALEVLM-GKHP 136
+SFGVV EVL G+ P
Sbjct: 238 WSFGVVMWEVLAYGERP 254
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I EYME GSL L+T + L K +++ +A ++++ +HRD
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 63 XXXXXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+ARL+ + + + R + APE T KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ E++ G+ P
Sbjct: 195 SFGILLTEIVTHGRIP 210
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+ ++ E+ME G+L LR ++ + + V +++G+A + YL VHRD
Sbjct: 92 VMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYLAEMS---YVHRDLAA 146
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI-----APELAYTMVVTEKSDV 120
V+DFG++R L +SS+ T + G I APE T SD
Sbjct: 147 RNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDA 206
Query: 121 YSFGVVALEVL-MGKHP 136
+S+G+V EV+ G+ P
Sbjct: 207 WSYGIVMWEVMSFGERP 223
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + +I EYME GSL LR ++ + + V +++G+ + YL D + VHRD
Sbjct: 82 KPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLS-DMS--YVHRDL 136
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + APE T SDV
Sbjct: 137 AARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDV 196
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 197 WSYGIVMWEVMSYGERP 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I EYM GSL L++DE L K ++ +A ++Y+ +HRD
Sbjct: 83 IYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKN---YIHRDLRA 138
Query: 66 XXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
+ADFG+AR++ + + + R + APE T KSDV+SFG
Sbjct: 139 ANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFG 198
Query: 125 VVALEVLM-GKHP 136
++ E++ GK P
Sbjct: 199 ILLYEIVTYGKIP 211
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + +I EYME GSL LR ++ + + V +++G+ + YL D + VHRD
Sbjct: 88 KPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLS-DMS--YVHRDL 142
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + APE T SDV
Sbjct: 143 AARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDV 202
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 203 WSYGIVMWEVMSYGERP 219
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ D E L V++ +A ++Y+ +HRD
Sbjct: 78 IYIVTEYMNKGSLLDFLK-DGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRS 133
Query: 66 XXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
+ADFG+ARL+ + + + R + APE A T KSDV+SFG
Sbjct: 134 ANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 193
Query: 125 VVALE-VLMGKHP 136
++ E V G+ P
Sbjct: 194 ILLTELVTKGRVP 206
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 66/134 (49%), Gaps = 13/134 (9%)
Query: 6 MFLIYEYMEMGSLFCVL---RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ E++E G+L ++ R +EE + + + ALSYLH+ ++HRD
Sbjct: 117 LWVVMEFLEGGALTDIVTHTRMNEEQIA-------TVCLSVLRALSYLHNQG---VIHRD 166
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
++DFG ++ + R L GT ++APE+ + + D++S
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWS 226
Query: 123 FGVVALEVLMGKHP 136
G++ +E++ G+ P
Sbjct: 227 LGIMVIEMIDGEPP 240
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEE---AVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
+ +F+I +Y+E G LF +LR + V +A V + AL YLH + I++
Sbjct: 79 QQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCL------ALEYLH---SKDIIY 129
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDV 120
RD + DFG A+ + L GT YIAPE+ T + D
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFAKYV---PDVTYXLCGTPDYIAPEVVSTKPYNKSIDW 186
Query: 121 YSFGVVALEVLMGKHP 136
+SFG++ E+L G P
Sbjct: 187 WSFGILIYEMLAGYTP 202
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + ++ EYME GSL LR + + + V +++G+A + YL VHRD
Sbjct: 119 KPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG+AR+L D G + +PE T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 234 WSYGIVLWEVMSYGERP 250
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
MFL+++ M G LF L E V L + +I++ + A+S+LH + IVHRD
Sbjct: 175 MFLVFDLMRKGELFDYL---TEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKP 228
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPE-LAYTMVVT-----EKSD 119
++DFG + L R L GT GY+APE L +M T ++ D
Sbjct: 229 ENILLDDNMQIRLSDFGFSCHLEPGEKLREL-CGTPGYLAPEILKCSMDETHPGYGKEVD 287
Query: 120 VYSFGVVALEVLMGKHP 136
+++ GV+ +L G P
Sbjct: 288 LWACGVILFTLLAGSPP 304
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI 104
+ YLH++ ++HRD + DFG+A + FD + L GT YI
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYI 209
Query: 105 APELAYTMVVTEKSDVYSFGVVALEVLMGKHPGE 138
APE+ + + D++S G + +L+GK P E
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI 104
+ YLH++ ++HRD + DFG+A + FD + L GT YI
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYI 209
Query: 105 APELAYTMVVTEKSDVYSFGVVALEVLMGKHPGE 138
APE+ + + D++S G + +L+GK P E
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + ++ EYME GSL LR + + + V +++G+A + YL VHRD
Sbjct: 119 KPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG---FVHRDL 173
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + +PE T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 234 WSYGIVLWEVMSYGERP 250
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI 104
+ YLH++ ++HRD + DFG+A + FD + L GT YI
Sbjct: 137 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYI 193
Query: 105 APELAYTMVVTEKSDVYSFGVVALEVLMGKHPGE 138
APE+ + + D++S G + +L+GK P E
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + ++ EYME GSL LR + + + V +++G+A + YL VHRD
Sbjct: 117 KPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG---YVHRDL 171
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + +PE T SDV
Sbjct: 172 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 231
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 232 WSYGIVLWEVMSYGERP 248
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I EYME GSL L+T + L K +++ +A ++++ +HR+
Sbjct: 75 QEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRN 130
Query: 63 XXXXXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+ARL+ + + + R + APE T KSDV+
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 190
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ E++ G+ P
Sbjct: 191 SFGILLTEIVTHGRIP 206
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + ++ EYME GSL LR + + + V +++G+A + YL VHRD
Sbjct: 119 KPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + +PE T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 234 WSYGIVLWEVMSYGERP 250
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + ++ EYME GSL LR + + + V +++G+A + YL VHRD
Sbjct: 119 KPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + +PE T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 234 WSYGIVLWEVMSYGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + ++ EYME GSL LR + + + V +++G+A + YL VHRD
Sbjct: 119 KPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + +PE T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 234 WSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + ++ EYME GSL LR + + + V +++G+A + YL VHRD
Sbjct: 119 KPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + +PE T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 234 WSYGIVLWEVMSYGERP 250
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + ++ EYME GSL LR + + + V +++G+A + YL VHRD
Sbjct: 107 KPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG---YVHRDL 161
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + +PE T SDV
Sbjct: 162 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 221
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 222 WSYGIVLWEVMSYGERP 238
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + ++ EYME GSL LR + + + V +++G+A + YL VHRD
Sbjct: 90 KPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSD---MGYVHRDL 144
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + +PE T SDV
Sbjct: 145 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 204
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 205 WSYGIVLWEVMSYGERP 221
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 14/135 (10%)
Query: 6 MFLIYEYMEMGSLFCVLRTD-----EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++++ +Y E G LF + +E LDW V I + H HD I+H
Sbjct: 98 LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF--VQICLALKHV-----HDRK--ILH 148
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDV 120
RD + DFG+AR+LN GT Y++PE+ KSD+
Sbjct: 149 RDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDI 208
Query: 121 YSFGVVALEVLMGKH 135
++ G V E+ KH
Sbjct: 209 WALGCVLYELCTLKH 223
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX-- 65
++ E++ G L+ R ++A + W+ ++ ++ +A + Y+ + PPIVHRD
Sbjct: 98 MVMEFVPCGDLYH--RLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPN 154
Query: 66 ---XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPEL--AYTMVVTEKSDV 120
A VADFG+++ S L G + ++APE A TEK+D
Sbjct: 155 IFLQSLDENAPVCAKVADFGLSQQSVHSVSG---LLGNFQWMAPETIGAEEESYTEKADT 211
Query: 121 YSFGVVALEVLMGKHP 136
YSF ++ +L G+ P
Sbjct: 212 YSFAMILYTILTGEGP 227
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI 104
+ YLH++ ++HRD + DFG+A + FD + L GT YI
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYI 209
Query: 105 APELAYTMVVTEKSDVYSFGVVALEVLMGKHPGE 138
APE+ + + D++S G + +L+GK P E
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 48 SYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPE 107
YLH + ++HRD + DFG+A + +D + +L GT YIAPE
Sbjct: 129 QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE 185
Query: 108 LAYTMVVTEKSDVYSFGVVALEVLMGKHPGE 138
+ + + DV+S G + +L+GK P E
Sbjct: 186 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 48 SYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPE 107
YLH + ++HRD + DFG+A + +D + +L GT YIAPE
Sbjct: 153 QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE 209
Query: 108 LAYTMVVTEKSDVYSFGVVALEVLMGKHPGE 138
+ + + DV+S G + +L+GK P E
Sbjct: 210 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 48 SYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPE 107
YLH + ++HRD + DFG+A + +D + +L GT YIAPE
Sbjct: 155 QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE 211
Query: 108 LAYTMVVTEKSDVYSFGVVALEVLMGKHPGE 138
+ + + DV+S G + +L+GK P E
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX-- 65
++ E++ G L+ R ++A + W+ ++ ++ +A + Y+ + PPIVHRD
Sbjct: 98 MVMEFVPCGDLYH--RLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPN 154
Query: 66 ---XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPEL--AYTMVVTEKSDV 120
A VADFG ++ S L G + ++APE A TEK+D
Sbjct: 155 IFLQSLDENAPVCAKVADFGTSQQSVHSVSG---LLGNFQWMAPETIGAEEESYTEKADT 211
Query: 121 YSFGVVALEVLMGKHP 136
YSF ++ +L G+ P
Sbjct: 212 YSFAMILYTILTGEGP 227
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + ++ EYME GSL LR + + + V +++G+A + YL VHRD
Sbjct: 119 KPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG+ R+L D G + +PE T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 234 WSYGIVLWEVMSYGERP 250
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I E+M GSL L++DE K ++ +A ++++ +HRD
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRD 136
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+AR++ + + R + APE T KSDV+
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ +E++ G+ P
Sbjct: 197 SFGILLMEIVTYGRIP 212
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 1 LHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV-----NIVKGMAHALSYLHHDCT 55
L + + L++E+ME G L LRT GL A+ + ++ +GMA YL C
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMA----YLEEAC- 121
Query: 56 PPIVHRDXXXXXXXXXXXXXAFVADFGVAR-LLNFDSSNRTLLAGTYGYIAPELAYTMVV 114
++HRD V+DFG+ R +L+ ++ T + +PE+
Sbjct: 122 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 179
Query: 115 TEKSDVYSFGVVALEVLM-GKHPGELLSSS 143
+ KSDV+SFGV+ EV GK P E S+S
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGKIPYENRSNS 209
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 1 LHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV-----NIVKGMAHALSYLHHDCT 55
L + + L++E+ME G L LRT GL A+ + ++ +GMA YL C
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMA----YLEEAC- 123
Query: 56 PPIVHRDXXXXXXXXXXXXXAFVADFGVAR-LLNFDSSNRTLLAGTYGYIAPELAYTMVV 114
++HRD V+DFG+ R +L+ ++ T + +PE+
Sbjct: 124 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 115 TEKSDVYSFGVVALEVLM-GKHPGELLSSS 143
+ KSDV+SFGV+ EV GK P E S+S
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIPYENRSNS 211
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 48 SYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPE 107
YLH + ++HRD + DFG+A + +D + L GT YIAPE
Sbjct: 131 QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE 187
Query: 108 LAYTMVVTEKSDVYSFGVVALEVLMGKHPGE 138
+ + + DV+S G + +L+GK P E
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 48 SYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPE 107
YLH + ++HRD + DFG+A + +D + L GT YIAPE
Sbjct: 131 QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE 187
Query: 108 LAYTMVVTEKSDVYSFGVVALEVLMGKHPGE 138
+ + + DV+S G + +L+GK P E
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 48 SYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPE 107
YLH + ++HRD + DFG+A + +D + L GT YIAPE
Sbjct: 135 QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE 191
Query: 108 LAYTMVVTEKSDVYSFGVVALEVLMGKHPGE 138
+ + + DV+S G + +L+GK P E
Sbjct: 192 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 1 LHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV-----NIVKGMAHALSYLHHDCT 55
L + + L++E+ME G L LRT GL A+ + ++ +GMA YL C
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMA----YLEEAC- 143
Query: 56 PPIVHRDXXXXXXXXXXXXXAFVADFGVAR-LLNFDSSNRTLLAGTYGYIAPELAYTMVV 114
++HRD V+DFG+ R +L+ ++ T + +PE+
Sbjct: 144 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 201
Query: 115 TEKSDVYSFGVVALEVLM-GKHPGELLSSS 143
+ KSDV+SFGV+ EV GK P E S+S
Sbjct: 202 SSKSDVWSFGVLMWEVFSEGKIPYENRSNS 231
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 1 LHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV-----NIVKGMAHALSYLHHDCT 55
L + + L++E+ME G L LRT GL A+ + ++ +GMA YL C
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMA----YLEEAC- 126
Query: 56 PPIVHRDXXXXXXXXXXXXXAFVADFGVAR-LLNFDSSNRTLLAGTYGYIAPELAYTMVV 114
++HRD V+DFG+ R +L+ ++ T + +PE+
Sbjct: 127 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 184
Query: 115 TEKSDVYSFGVVALEVLM-GKHPGELLSSS 143
+ KSDV+SFGV+ EV GK P E S+S
Sbjct: 185 SSKSDVWSFGVLMWEVFSEGKIPYENRSNS 214
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDC-------TPPI 58
++LI + E GSL L+ + + W + +I + MA L+YLH D P I
Sbjct: 97 LWLITAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAI 152
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRT----LLAGTYGYIAPELAYTMVV 114
HRD A +ADFG+A L F++ GT Y+APE+ +
Sbjct: 153 SHRDIKSKNVLLKNNLTACIADFGLA--LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAIN 210
Query: 115 TEKS-----DVYSFGVVALEV 130
++ D+Y+ G+V E+
Sbjct: 211 FQRDAFLRIDMYAMGLVLWEL 231
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + ++ EYME GSL L+ ++ + + V +++G++ + YL VHRD
Sbjct: 96 KPVMIVTEYMENGSLDTFLKKNDGQFTV--IQLVGMLRGISAGMKYLSDMG---YVHRDL 150
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + APE T SDV
Sbjct: 151 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDV 210
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 211 WSYGIVMWEVVSYGERP 227
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
RK ++L+ E+ G L+ L ++ D + ++ +A AL Y H ++HRD
Sbjct: 86 RKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYCHERK---VIHRD 139
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
+ADFG + ++ S R + GT Y+ PE+ EK D++
Sbjct: 140 IKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWC 197
Query: 123 FGVVALEVLMGKHP 136
GV+ E L+G P
Sbjct: 198 AGVLCYEFLVGMPP 211
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
RK ++L+ E+ G L+ L ++ D + ++ +A AL Y H ++HRD
Sbjct: 87 RKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYCHERK---VIHRD 140
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
+ADFG + ++ S R + GT Y+ PE+ EK D++
Sbjct: 141 IKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWC 198
Query: 123 FGVVALEVLMGKHP 136
GV+ E L+G P
Sbjct: 199 AGVLCYEFLVGMPP 212
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 6 MFLIYEYMEMGSLFCVL---RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ E++E G+L ++ R +EE + + + ALS LH ++HRD
Sbjct: 223 LWVVMEFLEGGALTDIVTHTRMNEEQIAA-------VCLAVLQALSVLHAQG---VIHRD 272
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
++DFG ++ + R L GT ++APEL + + D++S
Sbjct: 273 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 332
Query: 123 FGVVALEVLMGKHP 136
G++ +E++ G+ P
Sbjct: 333 LGIMVIEMVDGEPP 346
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 6 MFLIYEYMEMGSLFCVL---RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ E++E G+L ++ R +EE + + + ALS LH ++HRD
Sbjct: 103 LWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQG---VIHRD 152
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
++DFG ++ + R L GT ++APEL + + D++S
Sbjct: 153 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 212
Query: 123 FGVVALEVLMGKHP 136
G++ +E++ G+ P
Sbjct: 213 LGIMVIEMVDGEPP 226
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
RK ++L+ E+ G L+ L ++ D + ++ +A AL Y H ++HRD
Sbjct: 86 RKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYCHERK---VIHRD 139
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
+ADFG + ++ S R + GT Y+ PE+ EK D++
Sbjct: 140 IKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWC 197
Query: 123 FGVVALEVLMGKHP 136
GV+ E L+G P
Sbjct: 198 AGVLCYEFLVGMPP 211
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 6 MFLIYEYMEMGSLFCVL---RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ E++E G+L ++ R +EE + + + ALS LH ++HRD
Sbjct: 96 LWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQG---VIHRD 145
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
++DFG ++ + R L GT ++APEL + + D++S
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 205
Query: 123 FGVVALEVLMGKHP 136
G++ +E++ G+ P
Sbjct: 206 LGIMVIEMVDGEPP 219
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I E+M GSL L++DE L K ++ +A ++Y+ +HRD
Sbjct: 82 IYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKN---YIHRDLRA 137
Query: 66 XXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
+ADFG+AR++ + + + R + APE T KS+V+SFG
Sbjct: 138 ANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFG 197
Query: 125 VVALEVLM-GKHP 136
++ E++ GK P
Sbjct: 198 ILLYEIVTYGKIP 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 6 MFLIYEYMEMGSLFCVL---RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ E++E G+L ++ R +EE + + + ALS LH ++HRD
Sbjct: 101 LWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQG---VIHRD 150
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
++DFG ++ + R L GT ++APEL + + D++S
Sbjct: 151 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 210
Query: 123 FGVVALEVLMGKHP 136
G++ +E++ G+ P
Sbjct: 211 LGIMVIEMVDGEPP 224
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 6 MFLIYEYMEMGSLFCVL---RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ E++E G+L ++ R +EE + + + ALS LH ++HRD
Sbjct: 92 LWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQG---VIHRD 141
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
++DFG ++ + R L GT ++APEL + + D++S
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 201
Query: 123 FGVVALEVLMGKHP 136
G++ +E++ G+ P
Sbjct: 202 LGIMVIEMVDGEPP 215
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 6 MFLIYEYMEMGSLFCVL---RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ E++E G+L ++ R +EE + + + ALS LH ++HRD
Sbjct: 146 LWVVMEFLEGGALTDIVTHTRMNEEQIAA-------VCLAVLQALSVLHAQG---VIHRD 195
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
++DFG ++ + R L GT ++APEL + + D++S
Sbjct: 196 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 255
Query: 123 FGVVALEVLMGKHP 136
G++ +E++ G+ P
Sbjct: 256 LGIMVIEMVDGEPP 269
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
L+ EY E GSL+ VL E A ++ + ++YLH ++HRD
Sbjct: 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135
Query: 68 XXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVV 126
+ DFG A + +N G+ ++APE+ +EK DV+S+G++
Sbjct: 136 LLLVAGGTVLKICDFGTACDIQTHMTNNK---GSAAWMAPEVFEGSNYSEKCDVFSWGII 192
Query: 127 ALEVLMGKHP 136
EV+ + P
Sbjct: 193 LWEVITRRKP 202
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
L+ EY E GSL+ VL E A ++ + ++YLH ++HRD
Sbjct: 77 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 136
Query: 68 XXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVV 126
+ DFG A + +N G+ ++APE+ +EK DV+S+G++
Sbjct: 137 LLLVAGGTVLKICDFGTACDIQTHMTNNK---GSAAWMAPEVFEGSNYSEKCDVFSWGII 193
Query: 127 ALEVLMGKHP 136
EV+ + P
Sbjct: 194 LWEVITRRKP 203
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 23/149 (15%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVK--------------GMAHALSYL- 50
+++I EY G+L LR G++++ +N V +A + YL
Sbjct: 116 LYVIVEYASKGNLREYLRA-RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA 174
Query: 51 HHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--TYGYIAPEL 108
C +HRD +ADFG+AR +N + G ++APE
Sbjct: 175 SQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEA 230
Query: 109 AYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+ V T +SDV+SFGV+ E+ +G P
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 87 IYIVIEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRA 142
Query: 66 XXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + + R + APE A T KSDV+SFG
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 125 VVALEV 130
++ E+
Sbjct: 203 ILLTEL 208
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + ++ E ME GSL LR + + + V +++G+A + YL VHRD
Sbjct: 119 KPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMGA---VHRDL 173
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + +PE T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 234 WSYGIVLWEVMSYGERP 250
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 253 IYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRA 308
Query: 66 XXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + + R + APE A T KSDV+SFG
Sbjct: 309 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 125 VVALEV 130
++ E+
Sbjct: 369 ILLTEL 374
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 253 IYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRA 308
Query: 66 XXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + + R + APE A T KSDV+SFG
Sbjct: 309 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 125 VVALEV 130
++ E+
Sbjct: 369 ILLTEL 374
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 336 IYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRA 391
Query: 66 XXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + + R + APE A T KSDV+SFG
Sbjct: 392 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 451
Query: 125 VVALEV 130
++ E+
Sbjct: 452 ILLTEL 457
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX-- 65
++ E++ G L+ R ++A + W+ ++ ++ +A + Y+ + PPIVHRD
Sbjct: 98 MVMEFVPCGDLYH--RLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPN 154
Query: 66 ---XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPEL--AYTMVVTEKSDV 120
A VADF +++ S L G + ++APE A TEK+D
Sbjct: 155 IFLQSLDENAPVCAKVADFSLSQQSVHSVSG---LLGNFQWMAPETIGAEEESYTEKADT 211
Query: 121 YSFGVVALEVLMGKHP 136
YSF ++ +L G+ P
Sbjct: 212 YSFAMILYTILTGEGP 227
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 21/141 (14%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDC-----TPPIVH 60
++LI Y EMGSL+ L + LD + IV +A L++LH + P I H
Sbjct: 81 LWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLA-----GTYGYIAPE-LAYTMVV 114
RD +AD G+A +++ S+N+ + GT Y+APE L T+ V
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQV 195
Query: 115 T-----EKSDVYSFGVVALEV 130
++ D+++FG+V EV
Sbjct: 196 DCFDSYKRVDIWAFGLVLWEV 216
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 80 IYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRA 135
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + R + APE A T KSDV+SFG
Sbjct: 136 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 195
Query: 125 VVALEV 130
++ E+
Sbjct: 196 ILLTEL 201
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 21/141 (14%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDC-----TPPIVH 60
++LI Y EMGSL+ L + LD + IV +A L++LH + P I H
Sbjct: 110 LWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAH 165
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLA-----GTYGYIAPE-LAYTMVV 114
RD +AD G+A +++ S+N+ + GT Y+APE L T+ V
Sbjct: 166 RDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQV 224
Query: 115 T-----EKSDVYSFGVVALEV 130
++ D+++FG+V EV
Sbjct: 225 DCFDSYKRVDIWAFGLVLWEV 245
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 21/141 (14%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDC-----TPPIVH 60
++LI Y EMGSL+ L + LD + IV +A L++LH + P I H
Sbjct: 81 LWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLA-----GTYGYIAPE-LAYTMVV 114
RD +AD G+A +++ S+N+ + GT Y+APE L T+ V
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQV 195
Query: 115 T-----EKSDVYSFGVVALEV 130
++ D+++FG+V EV
Sbjct: 196 DCFDSYKRVDIWAFGLVLWEV 216
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ ++ E SL+ L E + K ++I + A + YLH I+HRD
Sbjct: 84 IVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNN 138
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPE---LAYTMVVTEKSDVYS 122
+ DFG+A + + S + L+G+ ++APE + + + +SDVY+
Sbjct: 139 IFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYA 198
Query: 123 FGVVALEVLMGKHP 136
FG+V E++ G+ P
Sbjct: 199 FGIVLYELMTGQLP 212
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 84 IYIVTEYMNKGSLLDFLK-GETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDLRA 139
Query: 66 XXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + + R + APE A T KSDV+SFG
Sbjct: 140 ANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 199
Query: 125 VVALEV 130
++ E+
Sbjct: 200 ILLTEL 205
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 1 LHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV-----NIVKGMAHALSYLHHDCT 55
L + + L+ E+ME G L LRT GL A+ + ++ +GMA YL C
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMA----YLEEAC- 124
Query: 56 PPIVHRDXXXXXXXXXXXXXAFVADFGVAR-LLNFDSSNRTLLAGTYGYIAPELAYTMVV 114
++HRD V+DFG+ R +L+ ++ T + +PE+
Sbjct: 125 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 182
Query: 115 TEKSDVYSFGVVALEVLM-GKHPGELLSSS 143
+ KSDV+SFGV+ EV GK P E S+S
Sbjct: 183 SSKSDVWSFGVLMWEVFSEGKIPYENRSNS 212
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 84 IYIVTEYMNKGSLLDFLK-GETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDLRA 139
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + R + APE A T KSDV+SFG
Sbjct: 140 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 199
Query: 125 VVALEV 130
++ E+
Sbjct: 200 ILLTEL 205
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I E+M GSL L++DE + K ++ +A ++++ +HRD
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQR---NYIHRD 309
Query: 63 XXXXXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+AR++ + + + R + APE T KSDV+
Sbjct: 310 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ +E++ G+ P
Sbjct: 370 SFGILLMEIVTYGRIP 385
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + ++ E ME GSL LR + + + V +++G+A + YL VHRD
Sbjct: 119 KPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + +PE T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 234 WSYGIVLWEVMSYGERP 250
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 253 IYIVGEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRA 308
Query: 66 XXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + + R + APE A T KSDV+SFG
Sbjct: 309 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 125 VVALEV 130
++ E+
Sbjct: 369 ILLTEL 374
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 87 IYIVIEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRA 142
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + R + APE A T KSDV+SFG
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 125 VVALEV 130
++ E+
Sbjct: 203 ILLTEL 208
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 87 IYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLAA 142
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + R + APE A T KSDV+SFG
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 125 VVALEV 130
++ E+
Sbjct: 203 ILLTEL 208
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + ++ E ME GSL LR + + + V +++G+A + YL VHRD
Sbjct: 90 KPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSD---MGYVHRDL 144
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R+L D G + +PE T SDV
Sbjct: 145 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 204
Query: 121 YSFGVVALEVLM-GKHP 136
+S+G+V EV+ G+ P
Sbjct: 205 WSYGIVLWEVMSYGERP 221
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV--NIVKGMAHALSYLHHDCTPPIVHRDX 63
++L+ E G + L+ + + A+ I+ GM YLH + I+HRD
Sbjct: 86 VYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGML----YLH---SHGILHRDL 138
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSF 123
+ADFG+A L L GT YI+PE+A +SDV+S
Sbjct: 139 TLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSL 198
Query: 124 GVVALEVLMGKHP 136
G + +L+G+ P
Sbjct: 199 GCMFYTLLIGRPP 211
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + ++ E+ME G+L LR + + + V +++G+A + YL VHRD
Sbjct: 117 KPVMIVIEFMENGALDAFLRKHDGQFTV--IQLVGMLRGIAAGMRYL---ADMGYVHRDL 171
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
V+DFG++R++ D G + APE T SDV
Sbjct: 172 AARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDV 231
Query: 121 YSFGVVALEVL-MGKHP 136
+S+G+V EV+ G+ P
Sbjct: 232 WSYGIVMWEVMSYGERP 248
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 87 IYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRA 142
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + R + APE A T KSDV+SFG
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 125 VVALEV 130
++ E+
Sbjct: 203 ILLTEL 208
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 76 IYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRA 131
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + R + APE A T KSDV+SFG
Sbjct: 132 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 191
Query: 125 VVALEV 130
++ E+
Sbjct: 192 ILLTEL 197
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 78 IYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRA 133
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + R + APE A T KSDV+SFG
Sbjct: 134 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 193
Query: 125 VVALEV 130
++ E+
Sbjct: 194 ILLTEL 199
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 87 IYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRA 142
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + R + APE A T KSDV+SFG
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 125 VVALEV 130
++ E+
Sbjct: 203 ILLTEL 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 126
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 186
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 126
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 79 IVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAAN 134
Query: 68 XXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVV 126
VADFG+ARL+ + + + R + APE A T KSDV+SFG++
Sbjct: 135 ILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 194
Query: 127 ALEV 130
E+
Sbjct: 195 LTEL 198
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 126
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 126
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 126
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 21/148 (14%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVK--------------GMAHALSYLH 51
+++I EY G+L LR G++++ +N V +A + YL
Sbjct: 116 LYVIVEYASKGNLREYLRA-RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL- 173
Query: 52 HDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--TYGYIAPELA 109
+ +HRD +ADFG+AR +N + G ++APE
Sbjct: 174 --ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEAL 231
Query: 110 YTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+ V T +SDV+SFGV+ E+ +G P
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 126
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 124
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 185 EPVDVWSCGIVLTAMLAGELPWDQPSDS 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 126
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 2 HRK---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPI 58
HR+ +L EY G LF + D +G+ + + YLH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---I 126
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVV-T 115
HRD ++DFG+A + +++ R L + GT Y+APEL
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 116 EKSDVYSFGVVALEVLMGKHPGELLSSS 143
E DV+S G+V +L G+ P + S S
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 87 IYIVCEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRA 142
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + R + APE A T KSDV+SFG
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 125 VVALEV 130
++ E+
Sbjct: 203 ILLTEL 208
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 21/148 (14%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVK--------------GMAHALSYLH 51
+++I EY G+L LR G++++ +N V +A + YL
Sbjct: 103 LYVIVEYASKGNLREYLRA-RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL- 160
Query: 52 HDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--TYGYIAPELA 109
+ +HRD +ADFG+AR +N + G ++APE
Sbjct: 161 --ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 218
Query: 110 YTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+ V T +SDV+SFGV+ E+ +G P
Sbjct: 219 FDRVYTHQSDVWSFGVLMWEIFTLGGSP 246
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 21/148 (14%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVK--------------GMAHALSYLH 51
+++I EY G+L LR G++++ +N V +A + YL
Sbjct: 116 LYVIVEYASKGNLREYLRA-RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL- 173
Query: 52 HDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--TYGYIAPELA 109
+ +HRD +ADFG+AR +N + G ++APE
Sbjct: 174 --ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231
Query: 110 YTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+ V T +SDV+SFGV+ E+ +G P
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 23/149 (15%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVK--------------GMAHALSYL- 50
+++I EY G+L LR G++++ +N V +A + YL
Sbjct: 162 LYVIVEYASKGNLREYLRA-RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA 220
Query: 51 HHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--TYGYIAPEL 108
C +HRD +ADFG+AR +N + G ++APE
Sbjct: 221 SQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEA 276
Query: 109 AYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+ V T +SDV+SFGV+ E+ +G P
Sbjct: 277 LFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVG---LDWAKRVNIVKGMAHALSYLH-HDCTPPI 58
+K +L+ E+ E G LF E+ + D NI+K + + YLH H+ I
Sbjct: 118 KKYFYLVTEFYEGGELF------EQIINRHKFDECDAANIMKQILSGICYLHKHN----I 167
Query: 59 VHRDXXXXXXXXXXXXXAF---VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVT 115
VHRD + DFG++ + D R L GT YIAPE+
Sbjct: 168 VHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL-GTAYYIAPEVLKKKY-N 225
Query: 116 EKSDVYSFGVVALEVLMGKHP 136
EK DV+S GV+ +L G P
Sbjct: 226 EKCDVWSCGVIMYILLCGYPP 246
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 21/148 (14%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVK--------------GMAHALSYLH 51
+++I EY G+L LR G++++ +N V +A + YL
Sbjct: 116 LYVIVEYASKGNLREYLRA-RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL- 173
Query: 52 HDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--TYGYIAPELA 109
+ +HRD +ADFG+AR +N + G ++APE
Sbjct: 174 --ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231
Query: 110 YTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+ V T +SDV+SFGV+ E+ +G P
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 23/149 (15%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVK--------------GMAHALSYL- 50
+++I EY G+L LR G++ + +N V +A + YL
Sbjct: 116 LYVIVEYASKGNLREYLRA-RRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA 174
Query: 51 HHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--TYGYIAPEL 108
C +HRD +ADFG+AR +N + G ++APE
Sbjct: 175 SQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEA 230
Query: 109 AYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+ V T +SDV+SFGV+ E+ +G P
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 21/148 (14%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVK--------------GMAHALSYLH 51
+++I EY G+L LR G++++ +N V +A + YL
Sbjct: 105 LYVIVEYASKGNLREYLRA-RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL- 162
Query: 52 HDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--TYGYIAPELA 109
+ +HRD +ADFG+AR +N + G ++APE
Sbjct: 163 --ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 220
Query: 110 YTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+ V T +SDV+SFGV+ E+ +G P
Sbjct: 221 FDRVYTHQSDVWSFGVLMWEIFTLGGSP 248
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 21/148 (14%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVK--------------GMAHALSYLH 51
+++I EY G+L LR G++++ +N V +A + YL
Sbjct: 108 LYVIVEYASKGNLREYLRA-RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL- 165
Query: 52 HDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--TYGYIAPELA 109
+ +HRD +ADFG+AR +N + G ++APE
Sbjct: 166 --ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 223
Query: 110 YTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+ V T +SDV+SFGV+ E+ +G P
Sbjct: 224 FDRVYTHQSDVWSFGVLMWEIFTLGGSP 251
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 21/148 (14%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVK--------------GMAHALSYLH 51
+++I EY G+L LR G++++ +N V +A + YL
Sbjct: 116 LYVIVEYASKGNLREYLRA-RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL- 173
Query: 52 HDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--TYGYIAPELA 109
+ +HRD +ADFG+AR +N + G ++APE
Sbjct: 174 --ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231
Query: 110 YTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+ V T +SDV+SFGV+ E+ +G P
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 21/148 (14%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVK--------------GMAHALSYLH 51
+++I EY G+L LR G++++ +N V +A + YL
Sbjct: 116 LYVIVEYASKGNLREYLRA-RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL- 173
Query: 52 HDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--TYGYIAPELA 109
+ +HRD +ADFG+AR +N + G ++APE
Sbjct: 174 --ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231
Query: 110 YTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+ V T +SDV+SFGV+ E+ +G P
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIA 105
AL YL + I+HRD + DF +A +L ++ T +AGT Y+A
Sbjct: 127 ALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ-ITTMAGTKPYMA 182
Query: 106 PEL-------AYTMVVTEKSDVYSFGVVALEVLMGKHPGELLSSSS 144
PE+ Y+ V D +S GV A E+L G+ P + SS+S
Sbjct: 183 PEMFSSRKGAGYSFAV----DWWSLGVTAYELLRGRRPYHIRSSTS 224
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 46.2 bits (108), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 53/133 (39%), Gaps = 7/133 (5%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
L EY E G L L E GL ++ ++ AL YLH + I+HRD
Sbjct: 95 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPE 151
Query: 67 XXXXXXXXXAFV---ADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSF 123
+ D G A+ L+ T GT Y+APEL T D +SF
Sbjct: 152 NIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 210
Query: 124 GVVALEVLMGKHP 136
G +A E + G P
Sbjct: 211 GTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 46.2 bits (108), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 53/133 (39%), Gaps = 7/133 (5%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
L EY E G L L E GL ++ ++ AL YLH + I+HRD
Sbjct: 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPE 150
Query: 67 XXXXXXXXXAFV---ADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSF 123
+ D G A+ L+ T GT Y+APEL T D +SF
Sbjct: 151 NIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 209
Query: 124 GVVALEVLMGKHP 136
G +A E + G P
Sbjct: 210 GTLAFECITGFRP 222
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ ++ E SL+ L E + K ++I + A + YLH I+HRD
Sbjct: 96 IVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNN 150
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPE---LAYTMVVTEKSDVYS 122
+ DFG+A + S + L+G+ ++APE + + + +SDVY+
Sbjct: 151 IFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYA 210
Query: 123 FGVVALEVLMGKHP 136
FG+V E++ G+ P
Sbjct: 211 FGIVLYELMTGQLP 224
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
KC+F+ E+ + G+L + LD + + + + + Y+H + ++HRD
Sbjct: 107 KCLFIQMEFCDKGTLEQWIEK-RRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDL 162
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSF 123
+ DFG+ L D RT GT Y++PE + ++ D+Y+
Sbjct: 163 KPSNIFLVDTKQVKIGDFGLVTSLKNDGK-RTRSKGTLRYMSPEQISSQDYGKEVDLYAL 221
Query: 124 GVVALEVL 131
G++ E+L
Sbjct: 222 GLILAELL 229
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ ++ E SL+ L E + K ++I + A + YLH I+HRD
Sbjct: 96 IVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNN 150
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPE---LAYTMVVTEKSDVYS 122
+ DFG+A + S + L+G+ ++APE + + + +SDVY+
Sbjct: 151 IFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYA 210
Query: 123 FGVVALEVLMGKHP 136
FG+V E++ G+ P
Sbjct: 211 FGIVLYELMTGQLP 224
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +F+I EYM G L LR E + + + K + A+ YL + +HRD
Sbjct: 91 QRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 145
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG--YIAPELAYTMVVTEKSDV 120
V+DFG++R + D + + + + PE+ + KSD+
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYV-LDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 121 YSFGVVALEVL-MGKHPGELLSSS 143
++FGV+ E+ +GK P E ++S
Sbjct: 205 WAFGVLMWEIYSLGKMPYERFTNS 228
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 1 LHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV-----NIVKGMAHALSYLHHDCT 55
L + + L++E+ME G L LRT GL A+ + ++ +GMA YL
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMA----YLEE--- 121
Query: 56 PPIVHRDXXXXXXXXXXXXXAFVADFGVAR-LLNFDSSNRTLLAGTYGYIAPELAYTMVV 114
++HRD V+DFG+ R +L+ ++ T + +PE+
Sbjct: 122 ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 115 TEKSDVYSFGVVALEVLM-GKHPGELLSSS 143
+ KSDV+SFGV+ EV GK P E S+S
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIPYENRSNS 211
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 20/144 (13%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
+ +F+ EY E G+L+ ++ ++ D R + + + ALSY+H + I+HRD
Sbjct: 87 KSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR--LFRQILEALSYIH---SQGIIHRD 141
Query: 63 XXXXXXXXXXXXXAFVADFGVAR-------LLNFDSSNR-------TLLAGTYGYIAPE- 107
+ DFG+A+ +L DS N T GT Y+A E
Sbjct: 142 LKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEV 201
Query: 108 LAYTMVVTEKSDVYSFGVVALEVL 131
L T EK D+YS G++ E++
Sbjct: 202 LDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 45.8 bits (107), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM GSL L+ E L + V++ +A ++Y+ VHRD
Sbjct: 254 IYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRA 309
Query: 66 XXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ RL+ + + + R + APE A T KSDV+SFG
Sbjct: 310 ANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 369
Query: 125 VVALEV 130
++ E+
Sbjct: 370 ILLTEL 375
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ ++ E SL+ L E + K ++I + A + YLH I+HRD
Sbjct: 82 IVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNN 136
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVVTE---KSDVYS 122
+ DFG+A + + S + L+G+ ++APE+ +SDVY+
Sbjct: 137 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 196
Query: 123 FGVVALEVLMGKHP 136
FG+V E++ G+ P
Sbjct: 197 FGIVLYELMTGQLP 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ ++ E SL+ L E + K ++I + A + YLH I+HRD
Sbjct: 85 IVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNN 139
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVVTE---KSDVYS 122
+ DFG+A + + S + L+G+ ++APE+ +SDVY+
Sbjct: 140 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 199
Query: 123 FGVVALEVLMGKHP 136
FG+V E++ G+ P
Sbjct: 200 FGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ ++ E SL+ L E + K ++I + A + YLH I+HRD
Sbjct: 80 IVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNN 134
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVVTE---KSDVYS 122
+ DFG+A + + S + L+G+ ++APE+ +SDVY+
Sbjct: 135 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 194
Query: 123 FGVVALEVLMGKHP 136
FG+V E++ G+ P
Sbjct: 195 FGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ ++ E SL+ L E + K ++I + A + YLH I+HRD
Sbjct: 85 IVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNN 139
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVVTE---KSDVYS 122
+ DFG+A + + S + L+G+ ++APE+ +SDVY+
Sbjct: 140 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 199
Query: 123 FGVVALEVLMGKHP 136
FG+V E++ G+ P
Sbjct: 200 FGIVLYELMTGQLP 213
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 6/134 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +F + EY+ G L +++ D ++ + L +LH + IV+RD
Sbjct: 90 KENLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLH---SKGIVYRD 143
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
+ADFG+ + + GT YIAPE+ D +S
Sbjct: 144 LKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWS 203
Query: 123 FGVVALEVLMGKHP 136
FGV+ E+L+G+ P
Sbjct: 204 FGVLLYEMLIGQSP 217
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 14/138 (10%)
Query: 3 RKCMFLIYEYMEMGSLFCVLR---TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIV 59
+KC+ L+ E G+L L+ + V W ++ I+KG L +LH TPPI+
Sbjct: 101 KKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ--ILKG----LQFLHTR-TPPII 153
Query: 60 HRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKS 118
HRD + + D G+A L +S + GT + APE Y E
Sbjct: 154 HRDLKCDNIFITGPTGSVKIGDLGLATLKR--ASFAKAVIGTPEFXAPE-XYEEKYDESV 210
Query: 119 DVYSFGVVALEVLMGKHP 136
DVY+FG LE ++P
Sbjct: 211 DVYAFGXCXLEXATSEYP 228
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ ++ E SL+ L E + K ++I + A + YLH I+HRD
Sbjct: 80 IVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNN 134
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVVTE---KSDVYS 122
+ DFG+A + + S + L+G+ ++APE+ +SDVY+
Sbjct: 135 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 194
Query: 123 FGVVALEVLMGKHP 136
FG+V E++ G+ P
Sbjct: 195 FGIVLYELMTGQLP 208
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ ++ E SL+ L E + K ++I + A + YLH I+HRD
Sbjct: 107 IVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNN 161
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVVTE---KSDVYS 122
+ DFG+A + + S + L+G+ ++APE+ +SDVY+
Sbjct: 162 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 221
Query: 123 FGVVALEVLMGKHP 136
FG+V E++ G+ P
Sbjct: 222 FGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ ++ E SL+ L E + K ++I + A + YLH I+HRD
Sbjct: 108 IVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNN 162
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVVTE---KSDVYS 122
+ DFG+A + + S + L+G+ ++APE+ +SDVY+
Sbjct: 163 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 222
Query: 123 FGVVALEVLMGKHP 136
FG+V E++ G+ P
Sbjct: 223 FGIVLYELMTGQLP 236
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +F+I EYM G L LR E + + + K + A+ YL + +HRD
Sbjct: 76 QRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 130
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG--YIAPELAYTMVVTEKSDV 120
V+DFG++R + D + + + + PE+ + KSD+
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 121 YSFGVVALEVL-MGKHPGELLSSSS 144
++FGV+ E+ +GK P E ++S
Sbjct: 190 WAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +F+I EYM G L LR E + + + K + A+ YL + +HRD
Sbjct: 71 QRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 125
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG--YIAPELAYTMVVTEKSDV 120
V+DFG++R + D + + + + PE+ + KSD+
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 184
Query: 121 YSFGVVALEVL-MGKHPGELLSSSS 144
++FGV+ E+ +GK P E ++S
Sbjct: 185 WAFGVLMWEIYSLGKMPYERFTNSE 209
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM G L L+ E L + V++ +A ++Y+ VHRD
Sbjct: 87 IYIVMEYMSKGCLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRA 142
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + R + APE A T KSDV+SFG
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 125 VVALEV 130
++ E+
Sbjct: 203 ILLTEL 208
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +F+I EYM G L LR E + + + K + A+ YL + +HRD
Sbjct: 75 QRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 129
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG-TYGYIAPELAYTMVVTEKSDVY 121
V+DFG++R + D ++ + + PE+ + KSD++
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 189
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
+FGV+ E+ +GK P E ++S
Sbjct: 190 AFGVLMWEIYSLGKMPYERFTNSE 213
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EYM G L L+ E L + V++ +A ++Y+ VHRD
Sbjct: 87 IYIVTEYMSKGCLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRA 142
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
VADFG+ARL+ + + R + APE A T KSDV+SFG
Sbjct: 143 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 125 VVALEV 130
++ E+
Sbjct: 203 ILLTEL 208
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 11/146 (7%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +F+I EYM G L LR E + + + K + A+ YL + +HRD
Sbjct: 76 QRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 130
Query: 63 XXXXXXXXXXXXXAFVADFGVARLL---NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSD 119
V+DFG++R + + SS + + PE+ + KSD
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWS--PPEVLMYSKFSSKSD 188
Query: 120 VYSFGVVALEVL-MGKHPGELLSSSS 144
+++FGV+ E+ +GK P E ++S
Sbjct: 189 IWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +F+I EYM G L LR E + + + K + A+ YL + +HRD
Sbjct: 82 QRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 136
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG--YIAPELAYTMVVTEKSDV 120
V+DFG++R + D + + + + PE+ + KSD+
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 195
Query: 121 YSFGVVALEVL-MGKHPGELLSSSS 144
++FGV+ E+ +GK P E ++S
Sbjct: 196 WAFGVLMWEIYSLGKMPYERFTNSE 220
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +F+I EYM G L LR E + + + K + A+ YL + +HRD
Sbjct: 91 QRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 145
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG--YIAPELAYTMVVTEKSDV 120
V+DFG++R + D + + + + PE+ + KSD+
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 121 YSFGVVALEVL-MGKHPGELLSSS 143
++FGV+ E+ +GK P E ++S
Sbjct: 205 WAFGVLMWEIYSLGKMPYERFTNS 228
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 6 MFLIYEYMEMGSLFCVLR----TDEEAVG-LDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++L+ + + GS+ +++ E G LD + I++ + L YLH + +H
Sbjct: 83 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IH 139
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLNFD-----SSNRTLLAGTYGYIAPELAYTMVVT 115
RD +ADFGV+ L + R GT ++APE+ +
Sbjct: 140 RDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY 199
Query: 116 E-KSDVYSFGVVALEVLMGKHP 136
+ K+D++SFG+ A+E+ G P
Sbjct: 200 DFKADIWSFGITAIELATGAAP 221
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 6/134 (4%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +F + EY+ G L +++ D ++ + L +LH + IV+RD
Sbjct: 91 KENLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLH---SKGIVYRD 144
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
+ADFG+ + + GT YIAPE+ D +S
Sbjct: 145 LKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWS 204
Query: 123 FGVVALEVLMGKHP 136
FGV+ E+L+G+ P
Sbjct: 205 FGVLLYEMLIGQSP 218
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 6 MFLIYEYMEMGSLFCVLR----TDEEAVG-LDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++L+ + + GS+ +++ E G LD + I++ + L YLH + +H
Sbjct: 88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IH 144
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLNFD-----SSNRTLLAGTYGYIAPELAYTMVVT 115
RD +ADFGV+ L + R GT ++APE+ +
Sbjct: 145 RDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY 204
Query: 116 E-KSDVYSFGVVALEVLMGKHP 136
+ K+D++SFG+ A+E+ G P
Sbjct: 205 DFKADIWSFGITAIELATGAAP 226
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++++ EY+ G L LR+ GL+ ++ + + + +++L + +HRD
Sbjct: 78 IYIVTEYISNGCLLNYLRS--HGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAA 132
Query: 66 XXXXXXXXXXAFVADFGVARLL---NFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
V+DFG+ R + + SS T + APE+ + + KSDV++
Sbjct: 133 RNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWS--APEVFHYFKYSSKSDVWA 190
Query: 123 FGVVALEVL-MGKHPGELLSSS 143
FG++ EV +GK P +L ++S
Sbjct: 191 FGILMWEVFSLGKMPYDLYTNS 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
L+ +Y+ +GSL +R A+G L+W V I KGM YL +VHR+
Sbjct: 109 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWG--VQIAKGM----YYLEEHG---MVHRNL 159
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLL----AGTYGYIAPELAYTMVVTEKSD 119
VADFGVA LL D ++ LL ++A E + T +SD
Sbjct: 160 AARNVLLKSPSQVQVADFGVADLLPPD--DKQLLYSEAKTPIKWMALESIHFGKYTHQSD 217
Query: 120 VYSFGVVALEVL 131
V+S+GV E++
Sbjct: 218 VWSYGVTVWELM 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
L+ +Y+ +GSL +R A+G L+W V I KGM YL +VHR+
Sbjct: 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWG--VQIAKGM----YYLEEHG---MVHRNL 141
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLL----AGTYGYIAPELAYTMVVTEKSD 119
VADFGVA LL D ++ LL ++A E + T +SD
Sbjct: 142 AARNVLLKSPSQVQVADFGVADLLPPD--DKQLLYSEAKTPIKWMALESIHFGKYTHQSD 199
Query: 120 VYSFGVVALEVL 131
V+S+GV E++
Sbjct: 200 VWSYGVTVWELM 211
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 19/156 (12%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLRTDEEA-------VGLDWAKRVNIVKGMAHALSYLHHDC 54
H + +I EY G L LR EA L+ ++ +A +++L
Sbjct: 121 HGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---A 177
Query: 55 TPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT----YGYIAPELAY 110
+ +HRD A + DFG+AR + DS+ ++ G ++APE +
Sbjct: 178 SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNARLPVKWMAPESIF 235
Query: 111 TMVVTEKSDVYSFGVVALEVL---MGKHPGELLSSS 143
V T +SDV+S+G++ E+ + +PG L++S
Sbjct: 236 DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK 271
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 19/156 (12%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLRTDEEA-------VGLDWAKRVNIVKGMAHALSYLHHDC 54
H + +I EY G L LR EA L+ ++ +A +++L
Sbjct: 113 HGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---A 169
Query: 55 TPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT----YGYIAPELAY 110
+ +HRD A + DFG+AR + DS+ ++ G ++APE +
Sbjct: 170 SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNARLPVKWMAPESIF 227
Query: 111 TMVVTEKSDVYSFGVVALEVL---MGKHPGELLSSS 143
V T +SDV+S+G++ E+ + +PG L++S
Sbjct: 228 DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK 263
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ ++ E SL+ L E + K ++I + A + YLH I+HRD
Sbjct: 80 IVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNN 134
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVVTE---KSDVYS 122
+ DFG+A + S + L+G+ ++APE+ +SDVY+
Sbjct: 135 IFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 194
Query: 123 FGVVALEVLMGKHP 136
FG+V E++ G+ P
Sbjct: 195 FGIVLYELMTGQLP 208
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ ++ E SL+ L E + K ++I + A + YLH I+HRD
Sbjct: 108 IVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNN 162
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVVTE---KSDVYS 122
+ DFG+A + S + L+G+ ++APE+ +SDVY+
Sbjct: 163 IFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 222
Query: 123 FGVVALEVLMGKHP 136
FG+V E++ G+ P
Sbjct: 223 FGIVLYELMTGQLP 236
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ ++ E SL+ L E + K ++I + A + YLH I+HRD
Sbjct: 100 IVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNN 154
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPELAYTMVVTE---KSDVYS 122
+ DFG+A + S + L+G+ ++APE+ +SDVY+
Sbjct: 155 IFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 214
Query: 123 FGVVALEVLMGKHP 136
FG+V E++ G+ P
Sbjct: 215 FGIVLYELMTGQLP 228
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVK--------------GMAHALSYLH 51
+++I Y G+L LR G++++ +N V +A + YL
Sbjct: 116 LYVIVAYASKGNLREYLRA-RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL- 173
Query: 52 HDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--TYGYIAPELA 109
+ +HRD +ADFG+AR +N + G ++APE
Sbjct: 174 --ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231
Query: 110 YTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+ V T +SDV+SFGV+ E+ +G P
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 94 LIMQLMPFGXLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 144
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 145 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 204
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 205 SYGVTVWELMTFGSKPYDGIPASE 228
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 6 MFLIYEYMEMGSLFCVLR-TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXX 64
++L+ E+ GS+ +++ T + +W I + + LS+LH ++HRD
Sbjct: 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREILRGLSHLHQH---KVIHRDIK 156
Query: 65 XXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTE-----KSD 119
+ DFGV+ L+ R GT ++APE+ + KSD
Sbjct: 157 GQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSD 216
Query: 120 VYSFGVVALEVLMGKHP 136
++S G+ A+E+ G P
Sbjct: 217 LWSLGITAIEMAEGAPP 233
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 93 LITQLMPFGXLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 143
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 144 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 203
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 204 SYGVTVWELMTFGSKPYDGIPASE 227
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDC--------TPP 57
++LI + + GSL L+ + + W + ++ + M+ LSYLH D P
Sbjct: 88 LWLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPS 143
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFD----SSNRTLLAGTYGYIAPELAYTMV 113
I HRD A +ADFG+A + F+ + GT Y+APE+ +
Sbjct: 144 IAHRDFKSKNVLLKSDLTAVLADFGLA--VRFEPGKPPGDTHGQVGTRRYMAPEVLEGAI 201
Query: 114 VTEKS-----DVYSFGVVALEVL 131
++ D+Y+ G+V E++
Sbjct: 202 NFQRDAFLRIDMYAMGLVLWELV 224
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 93 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 143
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 144 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 203
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 204 SYGVTVWELMTFGSKPYDGIPASE 227
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 95 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 145
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 146 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 205
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 206 SYGVTVWELMTFGSKPYDGIPASE 229
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 103 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 153
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 154 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 213
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 214 SYGVTVWELMTFGSKPYDGIPASE 237
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDR---RLVHRDL 143
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 144 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 203
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 204 SYGVTVWELMTFGSKPYDGIPASE 227
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 87 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDR---RLVHRDL 137
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 138 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 197
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 198 SYGVTVWELMTFGSKPYDGIPASE 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 96 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 146
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 147 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 206
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 207 SYGVTVWELMTFGSKPYDGIPASE 230
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 94 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 144
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 145 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 204
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 205 SYGVTVWELMTFGSKPYDGIPASE 228
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 96 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 146
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 147 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 206
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 207 SYGVTVWELMTFGSKPYDGIPASE 230
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 97 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 147
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 148 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 207
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 208 SYGVTVWELMTFGSKPYDGIPASE 231
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 143
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 144 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 203
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 204 SYGVTVWELMTFGSKPYDGIPASE 227
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 143
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 144 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 203
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 204 SYGVTVWELMTFGSKPYDGIPASE 227
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 99 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 149
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 150 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 209
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 210 SYGVTVWELMTFGSKPYDGIPASE 233
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 96 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 146
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 147 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 206
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 207 SYGVTVWELMTFGSKPYDGIPASE 230
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 127 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 177
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 178 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 237
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 238 SYGVTVWELMTFGSKPYDGIPASE 261
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 118 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 168
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 169 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 228
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 229 SYGVTVWELMTFGSKPYDGIPASE 252
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVK--------------GMAHALSYLH 51
+++I Y G+L LR G++++ +N V +A + YL
Sbjct: 116 LYVIVGYASKGNLREYLRA-RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL- 173
Query: 52 HDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--TYGYIAPELA 109
+ +HRD +ADFG+AR +N + G ++APE
Sbjct: 174 --ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231
Query: 110 YTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+ V T +SDV+SFGV+ E+ +G P
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 95 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 145
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 146 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 205
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 206 SYGVTVWELMTFGSKPYDGIPASE 229
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 100 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 150
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 151 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 210
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 211 SYGVTVWELMTFGSKPYDGIPASE 234
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 100 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 150
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 151 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 210
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 211 SYGVTVWELMTFGSKPYDGIPASE 234
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 100 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 150
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 151 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 210
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 211 SYGVTVWELMTFGSKPYDGIPASE 234
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 96 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 146
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 147 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 206
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 207 SYGVTVWELMTFGSKPYDGIPASE 230
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 7 FLIYEYMEMGSLFCVLR--TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXX 64
+++ EYM G+L LR EE + + + ++ A+ YL +HRD
Sbjct: 104 YIVTEYMPYGNLLDYLRECNREEVTAV---VLLYMATQISSAMEYLEKKN---FIHRDLA 157
Query: 65 XXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT---YGYIAPE-LAYTMVVTEKSDV 120
VADFG++RL+ D+ T AG + APE LAY + KSDV
Sbjct: 158 ARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-TFSIKSDV 214
Query: 121 YSFGVVALEVL---MGKHPGELLSS 142
++FGV+ E+ M +PG LS
Sbjct: 215 WAFGVLLWEIATYGMSPYPGIDLSQ 239
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 19/136 (13%)
Query: 5 CMFLIYEYMEMGSLFCVL----RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
CM E+M+ GSL VL R EE +G + +++G+A+ L H I+H
Sbjct: 92 CM----EHMDGGSLDQVLKEAKRIPEEILG---KVSIAVLRGLAY-LREKHQ-----IMH 138
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDV 120
RD + DFGV+ L DS + + GT Y+APE + +SD+
Sbjct: 139 RDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV-GTRSYMAPERLQGTHYSVQSDI 196
Query: 121 YSFGVVALEVLMGKHP 136
+S G+ +E+ +G++P
Sbjct: 197 WSMGLSLVELAVGRYP 212
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAV-GLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXX 64
++++ EYM GSL LR+ +V G D + ++ + A+ YL + VHRD
Sbjct: 81 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEYLEGNN---FVHRDLA 135
Query: 65 XXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
A V+DFG+ + SS + + APE + KSDV+SFG
Sbjct: 136 ARNVLVSEDNVAKVSDFGLTKEA---SSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFG 192
Query: 125 VVALEV 130
++ E+
Sbjct: 193 ILLWEI 198
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 43.1 bits (100), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 16/136 (11%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++ +++I E+M GSL L++DE + K ++ +A ++++ +HRD
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQR---NYIHRD 303
Query: 63 XXXXXXXXXXXXXAFVADFGVARL-LNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ADFG+AR+ F + APE T KSDV+
Sbjct: 304 LRAANILVSASLVCKIADFGLARVGAKF----------PIKWTAPEAINFGSFTIKSDVW 353
Query: 122 SFGVVALEVLM-GKHP 136
SFG++ +E++ G+ P
Sbjct: 354 SFGILLMEIVTYGRIP 369
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
++ ++ E SL+ L E + + ++I + A + YLH I+HRD
Sbjct: 108 IVTQWCEGSSLYKHLHVQETKFQM--FQLIDIARQTAQGMDYLH---AKNIIHRDMKSNN 162
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTL--LAGTYGYIAPE---LAYTMVVTEKSDVYS 122
+ DFG+A + + S ++ + G+ ++APE + + +SDVYS
Sbjct: 163 IFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYS 222
Query: 123 FGVVALEVLMGKHP 136
+G+V E++ G+ P
Sbjct: 223 YGIVLYELMTGELP 236
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 16/136 (11%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV----NIVKGMAHALSYLHHDCTPPI 58
R+ + L+ EY+ G L L+ LD ++ + I KGM + S
Sbjct: 85 RQSLRLVMEYLPSGCLRDFLQ--RHRARLDASRLLLYSSQICKGMEYLGSRR-------C 135
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSN---RTLLAGTYGYIAPELAYTMVVT 115
VHRD +ADFG+A+LL D R + APE + +
Sbjct: 136 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 195
Query: 116 EKSDVYSFGVVALEVL 131
+SDV+SFGVV E+
Sbjct: 196 RQSDVWSFGVVLYELF 211
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAV-GLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXX 64
++++ EYM GSL LR+ +V G D + ++ + A+ YL + VHRD
Sbjct: 262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEYLEGN---NFVHRDLA 316
Query: 65 XXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
A V+DFG+ + SS + + APE + KSDV+SFG
Sbjct: 317 ARNVLVSEDNVAKVSDFGLTKEA---SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFG 373
Query: 125 VVALEV 130
++ E+
Sbjct: 374 ILLWEI 379
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 16/136 (11%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV----NIVKGMAHALSYLHHDCTPPI 58
R+ + L+ EY+ G L L+ LD ++ + I KGM + S
Sbjct: 86 RQSLRLVMEYLPSGCLRDFLQ--RHRARLDASRLLLYSSQICKGMEYLGSRR-------C 136
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSN---RTLLAGTYGYIAPELAYTMVVT 115
VHRD +ADFG+A+LL D R + APE + +
Sbjct: 137 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 196
Query: 116 EKSDVYSFGVVALEVL 131
+SDV+SFGVV E+
Sbjct: 197 RQSDVWSFGVVLYELF 212
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 20/144 (13%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
+ +F+ EY E +L+ ++ ++ D R + + + ALSY+H + I+HRD
Sbjct: 87 KSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR--LFRQILEALSYIH---SQGIIHRD 141
Query: 63 XXXXXXXXXXXXXAFVADFGVAR-------LLNFDSSNR-------TLLAGTYGYIAPE- 107
+ DFG+A+ +L DS N T GT Y+A E
Sbjct: 142 LKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEV 201
Query: 108 LAYTMVVTEKSDVYSFGVVALEVL 131
L T EK D+YS G++ E++
Sbjct: 202 LDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 95 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 145
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG A+LL + G ++A E + T +SDV+
Sbjct: 146 AARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 205
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 206 SYGVTVWELMTFGSKPYDGIPASE 229
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 16/136 (11%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV----NIVKGMAHALSYLHHDCTPPI 58
R+ + L+ EY+ G L L+ LD ++ + I KGM + S
Sbjct: 98 RQSLRLVMEYLPSGCLRDFLQ--RHRARLDASRLLLYSSQICKGMEYLGSRR-------C 148
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSN---RTLLAGTYGYIAPELAYTMVVT 115
VHRD +ADFG+A+LL D R + APE + +
Sbjct: 149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 208
Query: 116 EKSDVYSFGVVALEVL 131
+SDV+SFGVV E+
Sbjct: 209 RQSDVWSFGVVLYELF 224
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAV-GLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXX 64
++++ EYM GSL LR+ +V G D + ++ + A+ YL + VHRD
Sbjct: 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEYLEGN---NFVHRDLA 129
Query: 65 XXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
A V+DFG+ + SS + + APE + KSDV+SFG
Sbjct: 130 ARNVLVSEDNVAKVSDFGLTKEA---SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFG 186
Query: 125 VVALEV 130
++ E+
Sbjct: 187 ILLWEI 192
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 95 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 145
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG A+LL + G ++A E + T +SDV+
Sbjct: 146 AARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 205
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 206 SYGVTVWELMTFGSKPYDGIPASE 229
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 21/159 (13%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHD-------- 53
H + +I EY G L LR + D A I A LH
Sbjct: 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPA--FAIANSTASTRDLLHFSSQVAQGMA 178
Query: 54 --CTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT----YGYIAPE 107
+ +HRD A + DFG+AR + DS+ ++ G ++APE
Sbjct: 179 FLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNARLPVKWMAPE 236
Query: 108 LAYTMVVTEKSDVYSFGVVALEVL---MGKHPGELLSSS 143
+ V T +SDV+S+G++ E+ + +PG L++S
Sbjct: 237 SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK 275
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAV-GLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXX 64
++++ EYM GSL LR+ +V G D + ++ + A+ YL + VHRD
Sbjct: 90 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEYLEGN---NFVHRDLA 144
Query: 65 XXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
A V+DFG+ + SS + + APE + KSDV+SFG
Sbjct: 145 ARNVLVSEDNVAKVSDFGLTKEA---SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFG 201
Query: 125 VVALEV 130
++ E+
Sbjct: 202 ILLWEI 207
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 97 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 147
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG A+LL + G ++A E + T +SDV+
Sbjct: 148 AARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 207
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 208 SYGVTVWELMTFGSKPYDGIPASE 231
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 143
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG A+LL + G ++A E + T +SDV+
Sbjct: 144 AARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 203
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 204 SYGVTVWELMTFGSKPYDGIPASE 227
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 95 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 145
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG A+LL + G ++A E + T +SDV+
Sbjct: 146 AARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 205
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 206 SYGVTVWELMTFGSKPYDGIPASE 229
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 23/138 (16%)
Query: 19 FCVLRTDEEAVGLDWAKRVNIVK------------------GMAHALSYLHHDCTPPIVH 60
FC ++ GL +AK ++K + AL YLH I+H
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIH 160
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLNFDS--SNRTLLAGTYGYIAPELAYTMVVTEKS 118
RD + DFG A++L+ +S + GT Y++PEL + S
Sbjct: 161 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 220
Query: 119 DVYSFGVVALEVLMGKHP 136
D+++ G + +++ G P
Sbjct: 221 DLWALGCIIYQLVAGLPP 238
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDS--SNRTLLAGTYGY 103
AL YLH I+HRD + DFG A++L+ +S + GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++PEL ++ SD+++ G + +++ G P
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 31/164 (18%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV---------------NIVKGMAHA 46
H + +I EY G L LR + D A + + +GMA
Sbjct: 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL 180
Query: 47 LSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT----YG 102
S +C +HRD A + DFG+AR + DS+ ++ G
Sbjct: 181 AS---KNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNARLPVK 231
Query: 103 YIAPELAYTMVVTEKSDVYSFGVVALEVL---MGKHPGELLSSS 143
++APE + V T +SDV+S+G++ E+ + +PG L++S
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK 275
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 11 EYMEMGSLFCVL----RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
E+M+ GSL VL R E+ +G + ++KG L+YL I+HRD
Sbjct: 87 EHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKG----LTYLREKHK--IMHRDVKPS 137
Query: 67 XXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVV 126
+ DFGV+ L + +N GT Y++PE + +SD++S G+
Sbjct: 138 NILVNSRGEIKLCDFGVSGQLIDEMANE--FVGTRSYMSPERLQGTHYSVQSDIWSMGLS 195
Query: 127 ALEVLMGKHP 136
+E+ +G++P
Sbjct: 196 LVEMAVGRYP 205
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I KGM +YL +VHRD
Sbjct: 100 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGM----NYLEDRR---LVHRDL 150
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG A+LL + G ++A E + T +SDV+
Sbjct: 151 AARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 210
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 211 SYGVTVWELMTFGSKPYDGIPASE 234
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 9/135 (6%)
Query: 6 MFLIYEYMEMGSLF-CVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXX 64
M+++ E E G L ++ L ++K M +AL+Y H + +VH+D
Sbjct: 95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLK 151
Query: 65 XXX---XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ DFG+A L D + T AGT Y+APE+ + VT K D++
Sbjct: 152 PENILFQDTSPHSPIKIIDFGLAELFKSDE-HSTNAAGTALYMAPEV-FKRDVTFKCDIW 209
Query: 122 SFGVVALEVLMGKHP 136
S GVV +L G P
Sbjct: 210 SAGVVMYFLLTGCLP 224
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDS--SNRTLLAGTYGY 103
AL YLH I+HRD + DFG A++L+ +S + GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++PEL + SD+++ G + +++ G P
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 16/136 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
L+ + M G L +R + +G L+W + I KGM SYL D +VHRD
Sbjct: 95 LVTQLMPYGCLLDHVRENRGRLGSQDLLNWC--MQIAKGM----SYLE-DVR--LVHRDL 145
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+ARLL+ D + G ++A E T +SDV+
Sbjct: 146 AARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVW 205
Query: 122 SFGVVALEVL-MGKHP 136
S+GV E++ G P
Sbjct: 206 SYGVTVWELMTFGAKP 221
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 90 YIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN---FIHRD 141
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYNKFSI-KS 198
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 16/113 (14%)
Query: 38 NIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLL 97
+ +GMA S +C +HRD A + DFG+AR + DS+ ++
Sbjct: 174 QVAQGMAFLAS---KNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIV 224
Query: 98 AGT----YGYIAPELAYTMVVTEKSDVYSFGVVALEVL---MGKHPGELLSSS 143
G ++APE + V T +SDV+S+G++ E+ + +PG L++S
Sbjct: 225 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK 277
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 16/113 (14%)
Query: 38 NIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLL 97
+ +GMA S +C +HRD A + DFG+AR + DS+ ++
Sbjct: 166 QVAQGMAFLAS---KNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIV 216
Query: 98 AGT----YGYIAPELAYTMVVTEKSDVYSFGVVALEVL---MGKHPGELLSSS 143
G ++APE + V T +SDV+S+G++ E+ + +PG L++S
Sbjct: 217 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK 269
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 86 YIIIEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN---FIHRD 137
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYNKFSI-KS 194
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPGIDLSQ 221
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 43 MAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNR--TLLAGT 100
+ AL YLH I+HRD + DFG A++L+ +S GT
Sbjct: 119 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
Y++PEL + SD+++ G + +++ G P
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 43 MAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNR--TLLAGT 100
+ AL YLH I+HRD + DFG A++L+ +S GT
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
Y++PEL + SD+++ G + +++ G P
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 43 MAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNR--TLLAGT 100
+ AL YLH I+HRD + DFG A++L+ +S GT
Sbjct: 116 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
Y++PEL + SD+++ G + +++ G P
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 43 MAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNR--TLLAGT 100
+ AL YLH I+HRD + DFG A++L+ +S GT
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
Y++PEL + SD+++ G + +++ G P
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDS--SNRTLLAGTYGY 103
AL YLH I+HRD + DFG A++L+ +S + GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++PEL + SD+++ G + +++ G P
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNR--TLLAGTYGY 103
AL YLH I+HRD + DFG A++L+ +S GT Y
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++PEL + SD+++ G + +++ G P
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDS--SNRTLLAGTYGY 103
AL YLH I+HRD + DFG A++L+ +S + GT Y
Sbjct: 147 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++PEL + SD+++ G + +++ G P
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNR--TLLAGTYGY 103
AL YLH I+HRD + DFG A++L+ +S GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++PEL + SD+++ G + +++ G P
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNR--TLLAGTYGY 103
AL YLH I+HRD + DFG A++L+ +S GT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++PEL + SD+++ G + +++ G P
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNR--TLLAGTYGY 103
AL YLH I+HRD + DFG A++L+ +S GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++PEL + SD+++ G + +++ G P
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDS--SNRTLLAGTYGY 103
AL YLH I+HRD + DFG A++L+ +S + GT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++PEL + SD+++ G + +++ G P
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNR--TLLAGTYGY 103
AL YLH I+HRD + DFG A++L+ +S GT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++PEL + SD+++ G + +++ G P
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDS--SNRTLLAGTYGY 103
AL YLH I+HRD + DFG A++L+ +S + GT Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++PEL + SD+++ G + +++ G P
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 16/136 (11%)
Query: 6 MFLIYEYMEMGSLFCVLRTD----EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHR 61
++LI +++ G LF L + EE V A+ +A AL +LH + I++R
Sbjct: 102 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE-------LALALDHLH---SLGIIYR 151
Query: 62 DXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDV 120
D + DFG+++ + D + GT Y+APE+ T+ +D
Sbjct: 152 DLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADW 210
Query: 121 YSFGVVALEVLMGKHP 136
+SFGV+ E+L G P
Sbjct: 211 WSFGVLMFEMLTGTLP 226
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
LI + M G L +R ++ +G L+W V I +GM +YL +VHRD
Sbjct: 90 LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAEGM----NYLEDR---RLVHRDL 140
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT--YGYIAPELAYTMVVTEKSDVY 121
+ DFG+A+LL + G ++A E + T +SDV+
Sbjct: 141 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 200
Query: 122 SFGVVALEVL-MGKHPGELLSSSS 144
S+GV E++ G P + + +S
Sbjct: 201 SYGVTVWELMTFGSKPYDGIPASE 224
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 86 YIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN---FIHRD 137
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAPAGAKFPIKWTAPESLAYNKFSI-KS 194
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPGIDLSQ 221
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 87 YIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN---FIHRD 138
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAPAGAKFPIKWTAPESLAYNKFSI-KS 195
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQ 222
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 43 MAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNR--TLLAGT 100
+ AL YLH I+HRD + DFG A++L+ +S GT
Sbjct: 123 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
Y++PEL + SD+++ G + +++ G P
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 16/136 (11%)
Query: 6 MFLIYEYMEMGSLFCVLRTD----EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHR 61
++LI +++ G LF L + EE V A+ +A AL +LH + I++R
Sbjct: 101 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE-------LALALDHLH---SLGIIYR 150
Query: 62 DXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDV 120
D + DFG+++ + D + GT Y+APE+ T+ +D
Sbjct: 151 DLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADW 209
Query: 121 YSFGVVALEVLMGKHP 136
+SFGV+ E+L G P
Sbjct: 210 WSFGVLMFEMLTGTLP 225
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
RKC+ ++ E ++ G LF ++ D + I+K + A+ YLH + I HRD
Sbjct: 101 RKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRD 156
Query: 63 XXXXXXXXXXXXXAFV---ADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSD 119
+ DFG A+ +S T Y Y+APE+ + D
Sbjct: 157 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 215
Query: 120 VYSFGVVALEVLMGKHP 136
++S GV+ +L G P
Sbjct: 216 MWSLGVIMYILLCGYPP 232
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDS--SNRTLLAGTYGY 103
AL YLH I+HRD + DFG A++L+ +S + GT Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++PEL + SD+++ G + +++ G P
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNR--TLLAGTYGY 103
AL YLH I+HRD + DFG A++L+ +S GT Y
Sbjct: 141 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++PEL + SD+++ G + +++ G P
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 22/142 (15%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 83 YIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKN---FIHRD 134
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYNKFSI-KS 191
Query: 119 DVYSFGVVALEVL---MGKHPG 137
DV++FGV+ E+ M +PG
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPG 213
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
RKC+ ++ E ++ G LF ++ D + I+K + A+ YLH + I HRD
Sbjct: 85 RKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRD 140
Query: 63 XXXXXXXXXXXXXAFV---ADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSD 119
+ DFG A+ +S T Y Y+APE+ + D
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 199
Query: 120 VYSFGVVALEVLMGKHP 136
++S GV+ +L G P
Sbjct: 200 MWSLGVIMYILLCGYPP 216
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 5 CMFLIYEYMEMGSLFCVL----RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
CM E+M+ GSL VL R E+ +G + ++KG L+YL I+H
Sbjct: 144 CM----EHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKG----LTYLREKHK--IMH 190
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDV 120
RD + DFGV+ L DS + + GT Y++PE + +SD+
Sbjct: 191 RDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV-GTRSYMSPERLQGTHYSVQSDI 248
Query: 121 YSFGVVALEVLMGKHP 136
+S G+ +E+ +G++P
Sbjct: 249 WSMGLSLVEMAVGRYP 264
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 90 YIIIEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN---FIHRD 141
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSI-KS 198
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 11 EYMEMGSLFCVL----RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
E+M+ GSL VL R E+ +G + ++KG L+YL I+HRD
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKG----LTYLREKHK--IMHRDVKPS 134
Query: 67 XXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVV 126
+ DFGV+ L DS + + GT Y++PE + +SD++S G+
Sbjct: 135 NILVNSRGEIKLCDFGVSGQL-IDSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 127 ALEVLMGKHP 136
+E+ +G++P
Sbjct: 193 LVEMAVGRYP 202
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
RKC+ ++ E ++ G LF ++ D + I+K + A+ YLH + I HRD
Sbjct: 86 RKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRD 141
Query: 63 XXXXXXXXXXXXXAFV---ADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSD 119
+ DFG A+ +S T Y Y+APE+ + D
Sbjct: 142 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 200
Query: 120 VYSFGVVALEVLMGKHP 136
++S GV+ +L G P
Sbjct: 201 MWSLGVIMYILLCGYPP 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ + LI EY+ GSL L+ +E + D K + + + YL T +HRD
Sbjct: 103 RRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRD 157
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI---APELAYTMVVTEKSD 119
+ DFG+ ++L D + I APE + SD
Sbjct: 158 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 217
Query: 120 VYSFGVVALEVL 131
V+SFGVV E+
Sbjct: 218 VWSFGVVLYELF 229
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
RKC+ ++ E ++ G LF ++ D + I+K + A+ YLH + I HRD
Sbjct: 91 RKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRD 146
Query: 63 XXXXXXXXXXXXXAFV---ADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSD 119
+ DFG A+ +S T Y Y+APE+ + D
Sbjct: 147 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 205
Query: 120 VYSFGVVALEVLMGKHP 136
++S GV+ +L G P
Sbjct: 206 MWSLGVIMYILLCGYPP 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
RKC+ ++ E ++ G LF ++ D + I+K + A+ YLH + I HRD
Sbjct: 93 RKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRD 148
Query: 63 XXXXXXXXXXXXXAFV---ADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSD 119
+ DFG A+ +S T Y Y+APE+ + D
Sbjct: 149 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 207
Query: 120 VYSFGVVALEVLMGKHP 136
++S GV+ +L G P
Sbjct: 208 MWSLGVIMYILLCGYPP 224
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 5 CMFLIYEYMEMGSLFCVL----RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
CM E+M+ GSL VL R E+ +G + ++KG L+YL I+H
Sbjct: 101 CM----EHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKG----LTYLREKHK--IMH 147
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDV 120
RD + DFGV+ L DS + + GT Y++PE + +SD+
Sbjct: 148 RDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV-GTRSYMSPERLQGTHYSVQSDI 205
Query: 121 YSFGVVALEVLMGKHP 136
+S G+ +E+ +G++P
Sbjct: 206 WSMGLSLVEMAVGRYP 221
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 90 YIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN---FIHRD 141
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSI-KS 198
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 22/142 (15%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 83 YIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKN---FIHRD 134
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYNKFSI-KS 191
Query: 119 DVYSFGVVALEVL---MGKHPG 137
DV++FGV+ E+ M +PG
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPG 213
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
RKC+ ++ E ++ G LF ++ D + I+K + A+ YLH + I HRD
Sbjct: 92 RKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRD 147
Query: 63 XXXXXXXXXXXXXAFV---ADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSD 119
+ DFG A+ +S T Y Y+APE+ + D
Sbjct: 148 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 206
Query: 120 VYSFGVVALEVLMGKHP 136
++S GV+ +L G P
Sbjct: 207 MWSLGVIMYILLCGYPP 223
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ + LI EY+ GSL L+ +E + D K + + + YL T +HRD
Sbjct: 103 RRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRD 157
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI---APELAYTMVVTEKSD 119
+ DFG+ ++L D + I APE + SD
Sbjct: 158 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 217
Query: 120 VYSFGVVALEVL 131
V+SFGVV E+
Sbjct: 218 VWSFGVVLYELF 229
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 11 EYMEMGSLFCVL----RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
E+M+ GSL VL R E+ +G + ++KG L+YL I+HRD
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKG----LTYLREKHK--IMHRDVKPS 134
Query: 67 XXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVV 126
+ DFGV+ L DS + + GT Y++PE + +SD++S G+
Sbjct: 135 NILVNSRGEIKLCDFGVSGQL-IDSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 127 ALEVLMGKHP 136
+E+ +G++P
Sbjct: 193 LVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 11 EYMEMGSLFCVL----RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
E+M+ GSL VL R E+ +G + ++KG L+YL I+HRD
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKG----LTYLREKHK--IMHRDVKPS 134
Query: 67 XXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVV 126
+ DFGV+ L DS + + GT Y++PE + +SD++S G+
Sbjct: 135 NILVNSRGEIKLCDFGVSGQL-IDSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 127 ALEVLMGKHP 136
+E+ +G++P
Sbjct: 193 LVEMAVGRYP 202
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
L+ + M G L + ++ +G L+W V I KGM YL +VHRD
Sbjct: 116 LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC--VQIAKGMM----YLEERR---LVHRDL 166
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY--GYIAPELAYTMVVTEKSDVY 121
+ DFG+ARLL D G ++A E + T +SDV+
Sbjct: 167 AARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVW 226
Query: 122 SFGVVALEVL 131
S+GV E++
Sbjct: 227 SYGVTIWELM 236
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ + LI EY+ GSL L+ +E + D K + + + YL T +HRD
Sbjct: 92 RRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRD 146
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI---APELAYTMVVTEKSD 119
+ DFG+ ++L D + I APE + SD
Sbjct: 147 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 206
Query: 120 VYSFGVVALEVL 131
V+SFGVV E+
Sbjct: 207 VWSFGVVLYELF 218
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 11 EYMEMGSLFCVL----RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
E+M+ GSL VL R E+ +G + ++KG L+YL I+HRD
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKG----LTYLREKHK--IMHRDVKPS 134
Query: 67 XXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVV 126
+ DFGV+ L DS + + GT Y++PE + +SD++S G+
Sbjct: 135 NILVNSRGEIKLCDFGVSGQL-IDSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 127 ALEVLMGKHP 136
+E+ +G++P
Sbjct: 193 LVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 11 EYMEMGSLFCVL----RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
E+M+ GSL VL R E+ +G + ++KG L+YL I+HRD
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKG----LTYLREKHK--IMHRDVKPS 134
Query: 67 XXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVV 126
+ DFGV+ L DS + + GT Y++PE + +SD++S G+
Sbjct: 135 NILVNSRGEIKLCDFGVSGQL-IDSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 127 ALEVLMGKHP 136
+E+ +G++P
Sbjct: 193 LVEMAVGRYP 202
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ + LI EY+ GSL L+ +E + D K + + + YL T +HRD
Sbjct: 88 RRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRD 142
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI---APELAYTMVVTEKSD 119
+ DFG+ ++L D + I APE + SD
Sbjct: 143 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 202
Query: 120 VYSFGVVALEVL 131
V+SFGVV E+
Sbjct: 203 VWSFGVVLYELF 214
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNR--TLLAGTYGY 103
AL YLH I+HRD + DFG A++L+ +S GT Y
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++PEL + SD+++ G + +++ G P
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 85 YIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN---FIHRD 136
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSI-KS 193
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
KC+F+ E+ + G+L + LD + + + + + Y+H + +++RD
Sbjct: 93 KCLFIQMEFCDKGTLEQWIEK-RRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDL 148
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSF 123
+ DFG+ L D R GT Y++PE + ++ D+Y+
Sbjct: 149 KPSNIFLVDTKQVKIGDFGLVTSLKNDGK-RXRSKGTLRYMSPEQISSQDYGKEVDLYAL 207
Query: 124 GVVALEVL 131
G++ E+L
Sbjct: 208 GLILAELL 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYL-HHDCTPPIVHR 61
R + L+ EY+ G L L+ LD ++ + + + YL C VHR
Sbjct: 82 RPELRLVMEYLPSGCLRDFLQ--RHRARLDASRLLLYSSQICKGMEYLGSRRC----VHR 135
Query: 62 DXXXXXXXXXXXXXAFVADFGVARLLNFDSSN---RTLLAGTYGYIAPELAYTMVVTEKS 118
D +ADFG+A+LL D R + APE + + +S
Sbjct: 136 DLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQS 195
Query: 119 DVYSFGVVALEVL 131
DV+SFGVV E+
Sbjct: 196 DVWSFGVVLYELF 208
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ + LI EY+ GSL L+ +E + D K + + + YL T +HRD
Sbjct: 85 RRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRD 139
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI---APELAYTMVVTEKSD 119
+ DFG+ ++L D + I APE + SD
Sbjct: 140 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 199
Query: 120 VYSFGVVALEVL 131
V+SFGVV E+
Sbjct: 200 VWSFGVVLYELF 211
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 5 CMFLIYEYMEMGSLFCVL----RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
CM E+M+ GSL VL R E+ +G + ++KG L+YL I+H
Sbjct: 109 CM----EHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKG----LTYLREKHK--IMH 155
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDV 120
RD + DFGV+ L DS + + GT Y++PE + +SD+
Sbjct: 156 RDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFV-GTRSYMSPERLQGTHYSVQSDI 213
Query: 121 YSFGVVALEVLMGKHP 136
+S G+ +E+ +G++P
Sbjct: 214 WSMGLSLVEMAVGRYP 229
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 90 YIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN---FIHRD 141
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSI-KS 198
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
RKC+ ++ E ++ G LF ++ D + I+K + A+ YLH + I HRD
Sbjct: 87 RKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRD 142
Query: 63 XXXXXXXXXXXXXAFV---ADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSD 119
+ DFG A+ +S T Y Y+APE+ + D
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 201
Query: 120 VYSFGVVALEVLMGKHP 136
++S GV+ +L G P
Sbjct: 202 MWSLGVIMYILLCGYPP 218
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 98 YIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN---FIHRD 149
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSI-KS 206
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 207 DVWAFGVLLWEIATYGMSPYPGIDLSQ 233
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
RKC+ ++ E ++ G LF ++ D + I+K + A+ YLH + I HRD
Sbjct: 137 RKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRD 192
Query: 63 XXXXXXXXXXXXXAFV---ADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSD 119
+ DFG A+ +S T Y Y+APE+ + D
Sbjct: 193 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 251
Query: 120 VYSFGVVALEVLMGKHP 136
++S GV+ +L G P
Sbjct: 252 MWSLGVIMYILLCGYPP 268
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ + LI EY+ GSL L+ +E + D K + + + YL T +HRD
Sbjct: 90 RRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRD 144
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI---APELAYTMVVTEKSD 119
+ DFG+ ++L D + I APE + SD
Sbjct: 145 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 204
Query: 120 VYSFGVVALEVL 131
V+SFGVV E+
Sbjct: 205 VWSFGVVLYELF 216
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
RKC+ ++ E ++ G LF ++ D + I+K + A+ YLH + I HRD
Sbjct: 87 RKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRD 142
Query: 63 XXXXXXXXXXXXXAFV---ADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSD 119
+ DFG A+ +S T Y Y+APE+ + D
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 201
Query: 120 VYSFGVVALEVLMGKHP 136
++S GV+ +L G P
Sbjct: 202 MWSLGVIMYILLCGYPP 218
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 89 YIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN---FIHRD 140
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSI-KS 197
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 198 DVWAFGVLLWEIATYGMSPYPGIDLSQ 224
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 87 YIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN---FIHRD 138
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSI-KS 195
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQ 222
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
RKC+ ++ E ++ G LF ++ D + I+K + A+ YLH + I HRD
Sbjct: 131 RKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRD 186
Query: 63 XXXXXXXXXXXXXAFV---ADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSD 119
+ DFG A+ +S T Y Y+APE+ + D
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 245
Query: 120 VYSFGVVALEVLMGKHP 136
++S GV+ +L G P
Sbjct: 246 MWSLGVIMYILLCGYPP 262
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ + LI EY+ GSL L+ +E + D K + + + YL T +HRD
Sbjct: 85 RRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRD 139
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI---APELAYTMVVTEKSD 119
+ DFG+ ++L D + I APE + SD
Sbjct: 140 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 199
Query: 120 VYSFGVVALEVL 131
V+SFGVV E+
Sbjct: 200 VWSFGVVLYELF 211
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 87 YIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN---FIHRD 138
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSI-KS 195
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQ 222
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ + LI EY+ GSL L+ +E + D K + + + YL T +HRD
Sbjct: 89 RRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRD 143
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI---APELAYTMVVTEKSD 119
+ DFG+ ++L D + I APE + SD
Sbjct: 144 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 203
Query: 120 VYSFGVVALEVL 131
V+SFGVV E+
Sbjct: 204 VWSFGVVLYELF 215
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 16/136 (11%)
Query: 6 MFLIYEYMEMGSLFCVLRTD----EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHR 61
++LI +++ G LF L + EE V A+ +A AL +LH + I++R
Sbjct: 101 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE-------LALALDHLH---SLGIIYR 150
Query: 62 DXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDV 120
D + DFG+++ + D + GT Y+APE+ T+ +D
Sbjct: 151 DLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADW 209
Query: 121 YSFGVVALEVLMGKHP 136
+SFGV+ E+L G P
Sbjct: 210 WSFGVLMFEMLTGTLP 225
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ + LI EY+ GSL L+ +E + D K + + + YL T +HRD
Sbjct: 83 RRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRD 137
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI---APELAYTMVVTEKSD 119
+ DFG+ ++L D + I APE + SD
Sbjct: 138 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 197
Query: 120 VYSFGVVALEVL 131
V+SFGVV E+
Sbjct: 198 VWSFGVVLYELF 209
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM S VH
Sbjct: 109 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKFLAS-------KKFVH 157
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLL---NFDS-SNRTLLAGTYGYIAPELAYTMVVTE 116
RD VADFG+AR + FDS N+T ++A E T T
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 217
Query: 117 KSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 218 KSDVWSFGVLLWELMTRGAP 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM S VH
Sbjct: 109 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKFLAS-------KKFVH 157
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLL---NFDS-SNRTLLAGTYGYIAPELAYTMVVTE 116
RD VADFG+AR + FDS N+T ++A E T T
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 217
Query: 117 KSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 218 KSDVWSFGVLLWELMTRGAP 237
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 43 MAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--T 100
+A + YL + +HRD +ADFG+AR ++ + G
Sbjct: 159 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLP 215
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
++APE + + T +SDV+SFGV+ E+ +G P
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ + LI EY+ GSL L+ +E + D K + + + YL T +HRD
Sbjct: 84 RRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRD 138
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI---APELAYTMVVTEKSD 119
+ DFG+ ++L D + I APE + SD
Sbjct: 139 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 198
Query: 120 VYSFGVVALEVL 131
V+SFGVV E+
Sbjct: 199 VWSFGVVLYELF 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ + LI EY+ GSL L+ +E + D K + + + YL T +HRD
Sbjct: 116 RRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRD 170
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI---APELAYTMVVTEKSD 119
+ DFG+ ++L D + I APE + SD
Sbjct: 171 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 230
Query: 120 VYSFGVVALEVL 131
V+SFGVV E+
Sbjct: 231 VWSFGVVLYELF 242
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 85 YIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKN---FIHRD 136
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSI-KS 193
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ + LI EY+ GSL L+ +E + D K + + + YL T +HRD
Sbjct: 91 RRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRD 145
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI---APELAYTMVVTEKSD 119
+ DFG+ ++L D + I APE + SD
Sbjct: 146 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 205
Query: 120 VYSFGVVALEVL 131
V+SFGVV E+
Sbjct: 206 VWSFGVVLYELF 217
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 21/148 (14%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKR--------------VNIVKGMAHALSYLH 51
+++I EY G+L L+ E GL+++ V+ +A + YL
Sbjct: 109 LYVIVEYASKGNLREYLQA-REPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL- 166
Query: 52 HDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--TYGYIAPELA 109
+ +HRD +ADFG+AR ++ + G ++APE
Sbjct: 167 --ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 224
Query: 110 YTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+ + T +SDV+SFGV+ E+ +G P
Sbjct: 225 FDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVG----LDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
L+ + M G L + ++ +G L+W V I KGM YL +VHRD
Sbjct: 93 LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC--VQIAKGMM----YLEERR---LVHRDL 143
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY--GYIAPELAYTMVVTEKSDVY 121
+ DFG+ARLL D G ++A E + T +SDV+
Sbjct: 144 AARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVW 203
Query: 122 SFGVVALEVL 131
S+GV E++
Sbjct: 204 SYGVTIWELM 213
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 85 YIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN---FIHRD 136
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT---YGYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSI-KS 193
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 90 YIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKN---FIHRD 141
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSI-KS 198
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM S VH
Sbjct: 106 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKFLAS-------KKFVH 154
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLL---NFDS-SNRTLLAGTYGYIAPELAYTMVVTE 116
RD VADFG+AR + FDS N+T ++A E T T
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 214
Query: 117 KSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 215 KSDVWSFGVLLWELMTRGAP 234
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 85 YIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKN---FIHRD 136
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSI-KS 193
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM S VH
Sbjct: 113 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKFLAS-------KKFVH 161
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLL---NFDS-SNRTLLAGTYGYIAPELAYTMVVTE 116
RD VADFG+AR + FDS N+T ++A E T T
Sbjct: 162 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 221
Query: 117 KSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 222 KSDVWSFGVLLWELMTRGAP 241
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM S VH
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKFLAS-------KKFVH 156
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLL---NFDS-SNRTLLAGTYGYIAPELAYTMVVTE 116
RD VADFG+AR + FDS N+T ++A E T T
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 117 KSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 217 KSDVWSFGVLLWELMTRGAP 236
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 85 YIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKN---FIHRD 136
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSI-KS 193
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 8/137 (5%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
RKC+ ++ E ++ G LF ++ D + I K + A+ YLH + I HRD
Sbjct: 131 RKCLLIVXECLDGGELFSRIQ-DRGDQAFTEREASEIXKSIGEAIQYLH---SINIAHRD 186
Query: 63 XXXXXXXXXXXXXAFV---ADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSD 119
+ DFG A+ +S T Y Y+APE+ + D
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 245
Query: 120 VYSFGVVALEVLMGKHP 136
+S GV+ +L G P
Sbjct: 246 XWSLGVIXYILLCGYPP 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 85 YIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKN---FIHRD 136
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSI-KS 193
Query: 119 DVYSFGVVALEVL---MGKHPGELLSS 142
DV++FGV+ E+ M +PG LS
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I++RD +ADFG+ + +D GT YIAPE+ +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 201
Query: 118 SDVYSFGVVALEVLMGKHPGE 138
D ++FGV+ E+L G+ P E
Sbjct: 202 VDWWAFGVLLYEMLAGQAPFE 222
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM S VH
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKFLAS-------KKFVH 156
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLL---NFDS-SNRTLLAGTYGYIAPELAYTMVVTE 116
RD VADFG+AR + FDS N+T ++A E T T
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 117 KSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 217 KSDVWSFGVLLWELMTRGAP 236
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNR--TLLAGTYGY 103
AL YLH I+HRD + DFG A++L+ +S GT Y
Sbjct: 141 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++PEL + SD+++ G + +++ G P
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM S VH
Sbjct: 167 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKFLASK-------KFVH 215
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLL---NFDS-SNRTLLAGTYGYIAPELAYTMVVTE 116
RD VADFG+AR + FDS N+T ++A E T T
Sbjct: 216 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 275
Query: 117 KSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 276 KSDVWSFGVLLWELMTRGAP 295
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 20/144 (13%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
+ +F+ EY E +L+ ++ ++ D R + + + ALSY+H + I+HR+
Sbjct: 87 KSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR--LFRQILEALSYIH---SQGIIHRN 141
Query: 63 XXXXXXXXXXXXXAFVADFGVAR-------LLNFDSSNR-------TLLAGTYGYIAPE- 107
+ DFG+A+ +L DS N T GT Y+A E
Sbjct: 142 LKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEV 201
Query: 108 LAYTMVVTEKSDVYSFGVVALEVL 131
L T EK D YS G++ E +
Sbjct: 202 LDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 12/139 (8%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
RKC+ ++ E ++ G LF ++ D + I+K + A+ YLH + I HRD
Sbjct: 85 RKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRD 140
Query: 63 XXXXXXXXXXXXXAFV---ADFGVARLLNFDSSNRTLLAGTYG--YIAPELAYTMVVTEK 117
+ DFG A+ +S+ +L Y Y+APE+ +
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKET---TSHNSLTEPCYTPYYVAPEVLGPEKYDKS 197
Query: 118 SDVYSFGVVALEVLMGKHP 136
D++S GV+ +L G P
Sbjct: 198 CDMWSLGVIMYILLCGYPP 216
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 22/142 (15%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HRD
Sbjct: 83 YIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKN---FIHRD 134
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY KS
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTF--TAHAGAKFPIKWTAPESLAYNKFSI-KS 191
Query: 119 DVYSFGVVALEVL---MGKHPG 137
DV++FGV+ E+ M +PG
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPG 213
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 38 NIVKGMAHALSYLHHDCTPPIVHRDXXXXX---XXXXXXXXAFVADFGVARLLNFDSSNR 94
+ VK + A++YLH + IVHRD +ADFG+++++ +
Sbjct: 152 DAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208
Query: 95 TLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
T+ GT GY APE+ + D++S G++ +L G P
Sbjct: 209 TV-CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 23/157 (14%)
Query: 6 MFLIYEYMEMGSLFCVLR------------TDEEAVG-LDWAKRVNIVKGMAHALSYLHH 52
+ +++EYM+ G L LR +A G L ++ ++I +A + YL
Sbjct: 92 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL-- 149
Query: 53 DCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG----TYGYIAPEL 108
+ VHRD + DFG++R + S++ + G ++ PE
Sbjct: 150 -ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR--DVYSTDYYRVGGHTMLPIRWMPPES 206
Query: 109 AYTMVVTEKSDVYSFGVVALEVLM-GKHPGELLSSSS 144
T +SDV+SFGV+ E+ GK P LS++
Sbjct: 207 IMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE 243
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 40.8 bits (94), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 37/81 (45%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I++RD +ADFG+ + +D GT YIAPE+ +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 118 SDVYSFGVVALEVLMGKHPGE 138
D ++FGV+ E+L G+ P E
Sbjct: 523 VDWWAFGVLLYEMLAGQAPFE 543
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGL-DWAKRV---NIVKGMAHALSYLHHDCTPPIV 59
+C+ L++E+ME L VL DE GL D ++ +++G+AH + I+
Sbjct: 92 RCLTLVFEFME-KDLKKVL--DENKTGLQDSQIKIYLYQLLRGVAHCHQHR-------IL 141
Query: 60 HRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPE-LAYTMVVTEKS 118
HRD +ADFG+AR + T T Y AP+ L + +
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSV 201
Query: 119 DVYSFGVVALEVLMGK 134
D++S G + E++ GK
Sbjct: 202 DIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGL-DWAKRV---NIVKGMAHALSYLHHDCTPPIV 59
+C+ L++E+ME L VL DE GL D ++ +++G+AH + I+
Sbjct: 92 RCLTLVFEFMEK-DLKKVL--DENKTGLQDSQIKIYLYQLLRGVAHCHQHR-------IL 141
Query: 60 HRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPE-LAYTMVVTEKS 118
HRD +ADFG+AR + T T Y AP+ L + +
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSV 201
Query: 119 DVYSFGVVALEVLMGK 134
D++S G + E++ GK
Sbjct: 202 DIWSIGCIFAEMITGK 217
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 40.4 bits (93), Expect = 4e-04, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 22/146 (15%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HR+
Sbjct: 289 YIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKK---NFIHRN 340
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT---YGYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY + KS
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKF-SIKS 397
Query: 119 DVYSFGVVALEVL---MGKHPGELLS 141
DV++FGV+ E+ M +PG LS
Sbjct: 398 DVWAFGVLLWEIATYGMSPYPGIDLS 423
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 8/132 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ + LI EY+ GSL L+ E + D K + + + YL T +HRD
Sbjct: 88 RRNLKLIMEYLPYGSLRDYLQAHAERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRD 142
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI---APELAYTMVVTEKSD 119
+ DFG+ ++L D + I APE + SD
Sbjct: 143 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 202
Query: 120 VYSFGVVALEVL 131
V+SFGVV E+
Sbjct: 203 VWSFGVVLYELF 214
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 8/146 (5%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHR 61
++ ++++ E ++ G LRT E L + +V A + YL C +HR
Sbjct: 183 QKQPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLESKCC---IHR 237
Query: 62 DXXXXXXXXXXXXXAFVADFGVAR--LLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSD 119
D ++DFG++R +++ L + APE + +SD
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 120 VYSFGVVALEVL-MGKHPGELLSSSS 144
V+SFG++ E +G P LS+
Sbjct: 298 VWSFGILLWETFSLGASPYPNLSNQQ 323
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 40.0 bits (92), Expect = 4e-04, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 22/146 (15%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HR+
Sbjct: 331 YIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKK---NFIHRN 382
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT---YGYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY + KS
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKF-SIKS 439
Query: 119 DVYSFGVVALEVL---MGKHPGELLS 141
DV++FGV+ E+ M +PG LS
Sbjct: 440 DVWAFGVLLWEIATYGMSPYPGIDLS 465
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 43 MAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--T 100
+A + YL + +HRD +ADFG+AR ++ + G
Sbjct: 148 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 204
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
++APE + + T +SDV+SFGV+ E+ +G P
Sbjct: 205 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 241
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 19/147 (12%)
Query: 6 MFLIYEYMEMGSL-------------FCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHH 52
+++I EY G+L +C + L V+ +A + YL
Sbjct: 94 LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-- 151
Query: 53 DCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--TYGYIAPELAY 110
+ +HRD +ADFG+AR ++ + G ++APE +
Sbjct: 152 -ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 210
Query: 111 TMVVTEKSDVYSFGVVALEVL-MGKHP 136
+ T +SDV+SFGV+ E+ +G P
Sbjct: 211 DRIYTHQSDVWSFGVLLWEIFTLGGSP 237
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 9/133 (6%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
FL+ E + G LF ++ + + I++ + A+S++H +VHRD
Sbjct: 82 FLVMELLNGGELFERIKKKKH---FSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPE 135
Query: 67 XXXXXXXXXAF---VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSF 123
+ DFG ARL D+ T Y APEL E D++S
Sbjct: 136 NLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSL 195
Query: 124 GVVALEVLMGKHP 136
GV+ +L G+ P
Sbjct: 196 GVILYTMLSGQVP 208
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I E +G L L+ LD A + ++ AL+YL + VHRD
Sbjct: 85 VWIIMELCTLGELRSFLQV--RKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA 139
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY--GYIAPELAYTMVVTEKSDVYSF 123
+ DFG++R + DS+ G ++APE T SDV+ F
Sbjct: 140 RNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 124 GVVALEVLM 132
GV E+LM
Sbjct: 199 GVCMWEILM 207
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 14/136 (10%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
L+ E E+G L L+ + + + +V ++ + YL VHRD
Sbjct: 87 MLVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEESN---FVHRDLAAR 140
Query: 67 XXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG-----YIAPELAYTMVVTEKSDVY 121
A ++DFG+++ L D + A T+G + APE + KSDV+
Sbjct: 141 NVLLVTQHYAKISDFGLSKALRADEN--XYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 198
Query: 122 SFGVVALEVL-MGKHP 136
SFGV+ E G+ P
Sbjct: 199 SFGVLMWEAFSYGQKP 214
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 40.0 bits (92), Expect = 4e-04, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 22/146 (15%)
Query: 7 FLIYEYMEMGSLFCVLR----TDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++I E+M G+L LR + AV L + + ++ A+ YL +HR+
Sbjct: 292 YIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKK---NFIHRN 343
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGT---YGYIAPE-LAYTMVVTEKS 118
VADFG++RL+ D+ T AG + APE LAY + KS
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKF-SIKS 400
Query: 119 DVYSFGVVALEVL---MGKHPGELLS 141
DV++FGV+ E+ M +PG LS
Sbjct: 401 DVWAFGVLLWEIATYGMSPYPGIDLS 426
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 43 MAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--T 100
+A + YL + +HRD +ADFG+AR ++ + G
Sbjct: 151 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 207
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
++APE + + T +SDV+SFGV+ E+ +G P
Sbjct: 208 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 244
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 43 MAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--T 100
+A + YL + +HRD +ADFG+AR ++ + G
Sbjct: 159 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
++APE + + T +SDV+SFGV+ E+ +G P
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 43 MAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--T 100
+A + YL + +HRD +ADFG+AR ++ + G
Sbjct: 159 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
++APE + + T +SDV+SFGV+ E+ +G P
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 43 MAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--T 100
+A + YL + +HRD +ADFG+AR ++ + G
Sbjct: 152 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 208
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
++APE + + T +SDV+SFGV+ E+ +G P
Sbjct: 209 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 245
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ + LI E++ GSL L+ +E + D K + + + YL T +HRD
Sbjct: 88 RRNLKLIMEFLPYGSLREYLQKHKERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRD 142
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI---APELAYTMVVTEKSD 119
+ DFG+ ++L D + I APE + SD
Sbjct: 143 LATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASD 202
Query: 120 VYSFGVVALEVL 131
V+SFGVV E+
Sbjct: 203 VWSFGVVLYELF 214
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 39.7 bits (91), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 8/129 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I E +G L L+ + LD A + ++ AL+YL + VHRD
Sbjct: 465 VWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA 519
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY--GYIAPELAYTMVVTEKSDVYSF 123
+ DFG++R + DS+ G ++APE T SDV+ F
Sbjct: 520 RNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 578
Query: 124 GVVALEVLM 132
GV E+LM
Sbjct: 579 GVCMWEILM 587
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM + S VH
Sbjct: 103 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKYLAS-------KKFVH 151
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLN----FDSSNRTLLAGTYGYIAPELAYTMVVTE 116
RD VADFG+AR + + N+T ++A E T T
Sbjct: 152 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 211
Query: 117 KSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 212 KSDVWSFGVLLWELMTRGAP 231
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 14/136 (10%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
L+ E E+G L L+ + + + +V ++ + YL VHRD
Sbjct: 101 MLVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEESN---FVHRDLAAR 154
Query: 67 XXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG-----YIAPELAYTMVVTEKSDVY 121
A ++DFG+++ L D + A T+G + APE + KSDV+
Sbjct: 155 NVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 212
Query: 122 SFGVVALEVL-MGKHP 136
SFGV+ E G+ P
Sbjct: 213 SFGVLMWEAFSYGQKP 228
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 43 MAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG--T 100
+A + YL + +HRD +ADFG+AR ++ + G
Sbjct: 200 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 256
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
++APE + + T +SDV+SFGV+ E+ +G P
Sbjct: 257 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM + S VH
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKYLAS-------KKFVH 156
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLN----FDSSNRTLLAGTYGYIAPELAYTMVVTE 116
RD VADFG+AR + + N+T ++A E T T
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 117 KSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 217 KSDVWSFGVLLWELMTRGAP 236
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
L+ E E+G L L+ + + + +V ++ + YL VHRD
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEESN---FVHRDLAARN 157
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG-----YIAPELAYTMVVTEKSDVYS 122
A ++DFG+++ L D + A T+G + APE + KSDV+S
Sbjct: 158 VLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 215
Query: 123 FGVVALEVL-MGKHP 136
FGV+ E G+ P
Sbjct: 216 FGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
L+ E E+G L L+ + + + +V ++ + YL VHRD
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEESN---FVHRDLAARN 157
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG-----YIAPELAYTMVVTEKSDVYS 122
A ++DFG+++ L D + A T+G + APE + KSDV+S
Sbjct: 158 VLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 215
Query: 123 FGVVALEVL-MGKHP 136
FGV+ E G+ P
Sbjct: 216 FGVLMWEAFSYGQKP 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM + S VH
Sbjct: 105 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKYLAS-------KKFVH 153
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLN----FDSSNRTLLAGTYGYIAPELAYTMVVTE 116
RD VADFG+AR + + N+T ++A E T T
Sbjct: 154 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 213
Query: 117 KSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 214 KSDVWSFGVLLWELMTRGAP 233
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM + S VH
Sbjct: 107 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKYLAS-------KKFVH 155
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLN----FDSSNRTLLAGTYGYIAPELAYTMVVTE 116
RD VADFG+AR + + N+T ++A E T T
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 215
Query: 117 KSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 216 KSDVWSFGVLLWELMTRGAP 235
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM + S VH
Sbjct: 100 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKYLAS-------KKFVH 148
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLN----FDSSNRTLLAGTYGYIAPELAYTMVVTE 116
RD VADFG+AR + + N+T ++A E T T
Sbjct: 149 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 208
Query: 117 KSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 209 KSDVWSFGVLLWELMTRGAP 228
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
L+ E E+G L L+ + + + +V ++ + YL VHRD
Sbjct: 84 LVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---NFVHRDLAARN 137
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG-----YIAPELAYTMVVTEKSDVYS 122
A ++DFG+++ L D + A T+G + APE + KSDV+S
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 195
Query: 123 FGVVALEVL-MGKHP 136
FGV+ E G+ P
Sbjct: 196 FGVLMWEAFSYGQKP 210
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM + S VH
Sbjct: 106 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKYLAS-------KKFVH 154
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLN----FDSSNRTLLAGTYGYIAPELAYTMVVTE 116
RD VADFG+AR + + N+T ++A E T T
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 214
Query: 117 KSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 215 KSDVWSFGVLLWELMTRGAP 234
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
L+ E E+G L L+ + + + +V ++ + YL VHRD
Sbjct: 82 LVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---NFVHRDLAARN 135
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG-----YIAPELAYTMVVTEKSDVYS 122
A ++DFG+++ L D + A T+G + APE + KSDV+S
Sbjct: 136 VLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 193
Query: 123 FGVVALEVL-MGKHP 136
FGV+ E G+ P
Sbjct: 194 FGVLMWEAFSYGQKP 208
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 22/158 (13%)
Query: 4 KCMFLIYEYMEMGSLFCVLRT-----------DEEAVG-LDWAKRVNIVKGMAHALSYLH 51
+ + +++EYM G L LR+ ++ A G L + + + +A + YL
Sbjct: 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL- 174
Query: 52 HDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLN----FDSSNRTLLAGTYGYIAPE 107
VHRD + DFG++R + + RT+L ++ PE
Sbjct: 175 --AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML--PIRWMPPE 230
Query: 108 LAYTMVVTEKSDVYSFGVVALEVLM-GKHPGELLSSSS 144
T +SDV+SFGVV E+ GK P LS++
Sbjct: 231 SILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE 268
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
L+ E E+G L L+ + + + +V ++ + YL VHRD
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEESN---FVHRDLAARN 141
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG-----YIAPELAYTMVVTEKSDVYS 122
A ++DFG+++ L D + A T+G + APE + KSDV+S
Sbjct: 142 VLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 199
Query: 123 FGVVALEVL-MGKHP 136
FGV+ E G+ P
Sbjct: 200 FGVLMWEAFSYGQKP 214
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM + S VH
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKYLAS-------KKFVH 156
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLN----FDSSNRTLLAGTYGYIAPELAYTMVVTE 116
RD VADFG+AR + + N+T ++A E T T
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 117 KSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 217 KSDVWSFGVLLWELMTRGAP 236
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ + LI EY+ GSL L+ +E + D K + + + YL T +HRD
Sbjct: 85 RRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRD 139
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI---APELAYTMVVTEKSD 119
+ DFG+ ++L D + I APE + SD
Sbjct: 140 LATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASD 199
Query: 120 VYSFGVVALEVL 131
V+SFGVV E+
Sbjct: 200 VWSFGVVLYELF 211
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRT----------DEEAVGLDWAKRVNIVKGMAHALSYLHHDCT 55
+ +++EYM+ G L LR L ++ ++I + +A + YL +
Sbjct: 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---AS 146
Query: 56 PPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG----TYGYIAPELAYT 111
VHRD + DFG++R + S++ + G ++ PE
Sbjct: 147 QHFVHRDLATRNCLVGENLLVKIGDFGMSR--DVYSTDYYRVGGHTMLPIRWMPPESIMY 204
Query: 112 MVVTEKSDVYSFGVVALEVLM-GKHPGELLSSSS 144
T +SDV+S GVV E+ GK P LS++
Sbjct: 205 RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE 238
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM + S VH
Sbjct: 127 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKYLAS-------KKFVH 175
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLN----FDSSNRTLLAGTYGYIAPELAYTMVVTE 116
RD VADFG+AR + + N+T ++A E T T
Sbjct: 176 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 235
Query: 117 KSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 236 KSDVWSFGVLLWELMTRGAP 255
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 14/136 (10%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
L+ E E+G L L+ + + + +V ++ + YL VHRD
Sbjct: 93 MLVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEESN---FVHRDLAAR 146
Query: 67 XXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG-----YIAPELAYTMVVTEKSDVY 121
A ++DFG+++ L D + A T+G + APE + KSDV+
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 204
Query: 122 SFGVVALEVL-MGKHP 136
SFGV+ E G+ P
Sbjct: 205 SFGVLMWEAFSYGQKP 220
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 23/141 (16%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM + S VH
Sbjct: 107 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKYLASK-------KFVH 155
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLNFDSS-----NRTLLAGTYGYIAPELAYTMVVT 115
RD VADFG+AR + +D N+T ++A E T T
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLARDM-YDKEXXSVHNKTGAKLPVKWMALESLQTQKFT 214
Query: 116 EKSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 215 TKSDVWSFGVLLWELMTRGAP 235
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 39.7 bits (91), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 8/129 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I E +G L L+ + LD A + ++ AL+YL + VHRD
Sbjct: 465 VWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA 519
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY--GYIAPELAYTMVVTEKSDVYSF 123
+ DFG++R + DS+ G ++APE T SDV+ F
Sbjct: 520 RNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 578
Query: 124 GVVALEVLM 132
GV E+LM
Sbjct: 579 GVCMWEILM 587
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 3 RKCMFLIYEYMEMGSLFCVL--RTDEEAVGLDWAKRVNIVKGMAHALSYLH-HDCTPPIV 59
++C+ +I E ME G LF + R D+ + A+ I++ + A+ +LH H+ I
Sbjct: 98 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAE---IMRDIGTAIQFLHSHN----IA 150
Query: 60 HRDXXXXXXXXXXXXXAFV---ADFGVARLLNFDSSNRTLLAGTYG--YIAPELAYTMVV 114
HRD V DFG A+ +++ L Y Y+APE+
Sbjct: 151 HRDVKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPEVLGPEKY 206
Query: 115 TEKSDVYSFGVVALEVLMGKHP 136
+ D++S GV+ +L G P
Sbjct: 207 DKSCDMWSLGVIMYILLCGFPP 228
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 22/158 (13%)
Query: 4 KCMFLIYEYMEMGSLFCVLRT-----------DEEAVG-LDWAKRVNIVKGMAHALSYLH 51
+ + +++EYM G L LR+ ++ A G L + + + +A + YL
Sbjct: 87 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL- 145
Query: 52 HDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLN----FDSSNRTLLAGTYGYIAPE 107
VHRD + DFG++R + + RT+L ++ PE
Sbjct: 146 --AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML--PIRWMPPE 201
Query: 108 LAYTMVVTEKSDVYSFGVVALEVLM-GKHPGELLSSSS 144
T +SDV+SFGVV E+ GK P LS++
Sbjct: 202 SILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE 239
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 39.3 bits (90), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 8/132 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+F++ EY+ G LF + + LD + + + + + Y H +VHRD
Sbjct: 91 IFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCHRHM---VVHRDLKP 144
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPE-LAYTMVVTEKSDVYSFG 124
A +ADFG++ +++ D G+ Y APE ++ + + D++S G
Sbjct: 145 ENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSG 203
Query: 125 VVALEVLMGKHP 136
V+ +L G P
Sbjct: 204 VILYALLCGTLP 215
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 7 FLIYEYMEMGSLFCVLRTD------EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
++ YM+ G L +R + ++ +G + + KGM + S VH
Sbjct: 126 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG----LQVAKGMKYLAS-------KKFVH 174
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLN----FDSSNRTLLAGTYGYIAPELAYTMVVTE 116
RD VADFG+AR + + N+T ++A E T T
Sbjct: 175 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 234
Query: 117 KSDVYSFGVVALEVLMGKHP 136
KSDV+SFGV+ E++ P
Sbjct: 235 KSDVWSFGVLLWELMTRGAP 254
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 22/158 (13%)
Query: 4 KCMFLIYEYMEMGSLFCVLRT-----------DEEAVG-LDWAKRVNIVKGMAHALSYLH 51
+ + +++EYM G L LR+ ++ A G L + + + +A + YL
Sbjct: 93 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL- 151
Query: 52 HDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLN----FDSSNRTLLAGTYGYIAPE 107
VHRD + DFG++R + + RT+L ++ PE
Sbjct: 152 --AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML--PIRWMPPE 207
Query: 108 LAYTMVVTEKSDVYSFGVVALEVLM-GKHPGELLSSSS 144
T +SDV+SFGVV E+ GK P LS++
Sbjct: 208 SILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE 245
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 3 RKCMFLIYEYMEMGSLFCVL--RTDEEAVGLDWAKRVNIVKGMAHALSYLH-HDCTPPIV 59
++C+ +I E ME G LF + R D+ + A+ I++ + A+ +LH H+ I
Sbjct: 79 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAE---IMRDIGTAIQFLHSHN----IA 131
Query: 60 HRDXXXXXXXXXXXXXAFV---ADFGVARLLNFDSSNRTLLAGTYG--YIAPELAYTMVV 114
HRD V DFG A+ +++ L Y Y+APE+
Sbjct: 132 HRDVKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPEVLGPEKY 187
Query: 115 TEKSDVYSFGVVALEVLMGKHP 136
+ D++S GV+ +L G P
Sbjct: 188 DKSCDMWSLGVIMYILLCGFPP 209
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 8/146 (5%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHR 61
++ ++++ E ++ G LRT E L + +V A + YL C +HR
Sbjct: 183 QKQPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLESKCC---IHR 237
Query: 62 DXXXXXXXXXXXXXAFVADFGVAR--LLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSD 119
D ++DFG++R +++ L + APE + +SD
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 120 VYSFGVVALEVL-MGKHPGELLSSSS 144
V+SFG++ E +G P LS+
Sbjct: 298 VWSFGILLWETFSLGASPYPNLSNQQ 323
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 20/139 (14%)
Query: 8 LIYEYMEMGSLFCVLRT-------DEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVH 60
+ E + GSL +LR+ +E+ +G K + L YLH + IVH
Sbjct: 96 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-------YTKQILEGLKYLHDN---QIVH 145
Query: 61 RDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGYIAPEL--AYTMVVTEK 117
RD ++DFG ++ L + GT Y+APE+ +
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 205
Query: 118 SDVYSFGVVALEVLMGKHP 136
+D++S G +E+ GK P
Sbjct: 206 ADIWSLGCTIIEMATGKPP 224
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 26/154 (16%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVK--------------------GMAH 45
++LI+EY G L LR+ E D + N + +A
Sbjct: 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAK 183
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSN--RTLLAGTYGY 103
+ +L VHRD + DFG+AR + DS+ R +
Sbjct: 184 GMEFLEFKSC---VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKW 240
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+APE + + T KSDV+S+G++ E+ +G +P
Sbjct: 241 MAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 39.3 bits (90), Expect = 9e-04, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
L+ E E+G L L+ + + + +V ++ + YL VHRD
Sbjct: 446 LVMEMAELGPLNKYLQQNRHVKDKNI---IELVHQVSMGMKYLEES---NFVHRDLAARN 499
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG-----YIAPELAYTMVVTEKSDVYS 122
A ++DFG+++ L D + A T+G + APE + KSDV+S
Sbjct: 500 VLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWS 557
Query: 123 FGVVALEVL-MGKHP 136
FGV+ E G+ P
Sbjct: 558 FGVLMWEAFSYGQKP 572
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 39.3 bits (90), Expect = 9e-04, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
L+ E E+G L L+ + + + +V ++ + YL VHRD
Sbjct: 447 LVMEMAELGPLNKYLQQNRHVKDKNI---IELVHQVSMGMKYLEES---NFVHRDLAARN 500
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG-----YIAPELAYTMVVTEKSDVYS 122
A ++DFG+++ L D + A T+G + APE + KSDV+S
Sbjct: 501 VLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWS 558
Query: 123 FGVVALEVL-MGKHP 136
FGV+ E G+ P
Sbjct: 559 FGVLMWEAFSYGQKP 573
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 20/136 (14%)
Query: 11 EYMEMGSLFCVLRT-------DEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
E + GSL +LR+ +E+ +G K + L YLH + IVHRD
Sbjct: 85 EQVPGGSLSALLRSKWGPLKDNEQTIGF-------YTKQILEGLKYLHDN---QIVHRDI 134
Query: 64 XXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGYIAPEL--AYTMVVTEKSDV 120
++DFG ++ L + GT Y+APE+ + +D+
Sbjct: 135 KGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADI 194
Query: 121 YSFGVVALEVLMGKHP 136
+S G +E+ GK P
Sbjct: 195 WSLGCTIIEMATGKPP 210
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I E +G L L+ LD A + ++ AL+YL + VHRD
Sbjct: 85 VWIIMELCTLGELRSFLQV--RKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA 139
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY--GYIAPELAYTMVVTEKSDVYSF 123
+ DFG++R + DS+ G ++APE T SDV+ F
Sbjct: 140 RNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 124 GVVALEVLM 132
GV E+LM
Sbjct: 199 GVCMWEILM 207
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 21/124 (16%)
Query: 20 CVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVA 79
C + E +V L +I +A A+ +LH + ++HRD V
Sbjct: 110 CTIEERERSVCL------HIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVG 160
Query: 80 DFGVARLLNFDSSNRTLLA------------GTYGYIAPELAYTMVVTEKSDVYSFGVVA 127
DFG+ ++ D +T+L GT Y++PE + + K D++S G++
Sbjct: 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLIL 220
Query: 128 LEVL 131
E+L
Sbjct: 221 FELL 224
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 38.9 bits (89), Expect = 0.001, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV--NIVKGMAHAL--SYLHHDCTPPIVHR 61
M +IYE+M G LF + + + D A + KG+ H +Y+H D P +
Sbjct: 123 MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENI-- 180
Query: 62 DXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ DFG+ L+ S + + GT + APE+A V +D++
Sbjct: 181 -----MFTTKRSNELKLIDFGLTAHLDPKQSVK-VTTGTAEFAAPEVAEGKPVGYYTDMW 234
Query: 122 SFGVVALEVLMGKHP 136
S GV++ +L G P
Sbjct: 235 SVGVLSYILLSGLSP 249
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 38.9 bits (89), Expect = 0.001, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV--NIVKGMAHAL--SYLHHDCTPPIVHR 61
M +IYE+M G LF + + + D A + KG+ H +Y+H D P +
Sbjct: 229 MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENI-- 286
Query: 62 DXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
+ DFG+ L+ S + + GT + APE+A V +D++
Sbjct: 287 -----MFTTKRSNELKLIDFGLTAHLDPKQSVK-VTTGTAEFAAPEVAEGKPVGYYTDMW 340
Query: 122 SFGVVALEVLMGKHP 136
S GV++ +L G P
Sbjct: 341 SVGVLSYILLSGLSP 355
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 6/133 (4%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+F + E++ G L + +++ D A+ + AL +LH I++RD
Sbjct: 99 LFFVMEFVNGGDLMFHI---QKSRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKL 152
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG+ + + GT YIAPE+ M+ D ++ GV
Sbjct: 153 DNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGV 212
Query: 126 VALEVLMGKHPGE 138
+ E+L G P E
Sbjct: 213 LLYEMLCGHAPFE 225
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 29/149 (19%)
Query: 7 FLIYEYMEMGSL--FCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDC------TPPI 58
L+ EY GSL + L T DW + + L+YLH + P I
Sbjct: 88 LLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI 141
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVA------RLLNFDSSNRTLLA--GTYGYIAPELAY 110
HRD ++DFG++ RL+ + ++ GT Y+APE+
Sbjct: 142 SHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLE 201
Query: 111 TMV-------VTEKSDVYSFGVVALEVLM 132
V ++ D+Y+ G++ E+ M
Sbjct: 202 GAVNLRDXESALKQVDMYALGLIYWEIFM 230
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLL-AGTY--GYIAPELAYTMVVT 115
VHRD A ++DFG+++ L D S T AG + + APE +
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 116 EKSDVYSFGVVALEVL-MGKHP 136
+SDV+S+GV E L G+ P
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKP 213
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 29/145 (20%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDC-----TPPIVH 60
++LI +Y E GSL+ L+ + LD + + L +LH + P I H
Sbjct: 110 LYLITDYHENGSLYDYLK----STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAH 165
Query: 61 RDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL----LAGTYGYIAPEL-------- 108
RD +AD G+A D++ + GT Y+ PE+
Sbjct: 166 RDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRN 225
Query: 109 ---AYTMVVTEKSDVYSFGVVALEV 130
+Y M +D+YSFG++ EV
Sbjct: 226 HFQSYIM-----ADMYSFGLILWEV 245
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I E +G L L+ LD A + ++ AL+YL + VHRD
Sbjct: 87 VWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA 141
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY--GYIAPELAYTMVVTEKSDVYSF 123
+ DFG++R + DS+ G ++APE T SDV+ F
Sbjct: 142 RNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 200
Query: 124 GVVALEVLM 132
GV E+LM
Sbjct: 201 GVCMWEILM 209
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I E +G L L+ LD A + ++ AL+YL + VHRD
Sbjct: 85 VWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA 139
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY--GYIAPELAYTMVVTEKSDVYSF 123
+ DFG++R + DS+ G ++APE T SDV+ F
Sbjct: 140 RNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 124 GVVALEVLM 132
GV E+LM
Sbjct: 199 GVCMWEILM 207
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I E +G L L+ LD A + ++ AL+YL + VHRD
Sbjct: 85 VWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA 139
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY--GYIAPELAYTMVVTEKSDVYSF 123
+ DFG++R + DS+ G ++APE T SDV+ F
Sbjct: 140 RNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 124 GVVALEVLM 132
GV E+LM
Sbjct: 199 GVCMWEILM 207
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I E +G L L+ LD A + ++ AL+YL + VHRD
Sbjct: 88 VWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA 142
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY--GYIAPELAYTMVVTEKSDVYSF 123
+ DFG++R + DS+ G ++APE T SDV+ F
Sbjct: 143 RNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 201
Query: 124 GVVALEVLM 132
GV E+LM
Sbjct: 202 GVCMWEILM 210
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 38 NIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLL 97
+ KGMA S +C +HRD + DFG+AR + DS+ ++
Sbjct: 169 QVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN--YVV 219
Query: 98 AGT----YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
G ++APE + V T +SDV+S+G+ E+ +G P
Sbjct: 220 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I E +G L L+ LD A + ++ AL+YL + VHRD
Sbjct: 82 VWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA 136
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY--GYIAPELAYTMVVTEKSDVYSF 123
+ DFG++R + DS+ G ++APE T SDV+ F
Sbjct: 137 RNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 195
Query: 124 GVVALEVLM 132
GV E+LM
Sbjct: 196 GVCMWEILM 204
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 38 NIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLL 97
+ KGMA S +C +HRD + DFG+AR + DS+ ++
Sbjct: 171 QVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN--YVV 221
Query: 98 AGT----YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
G ++APE + V T +SDV+S+G+ E+ +G P
Sbjct: 222 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 8/129 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I E +G L L+ + LD A + ++ AL+YL + VHRD
Sbjct: 113 VWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA 167
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY--GYIAPELAYTMVVTEKSDVYSF 123
+ DFG++R + DS+ G ++APE T SDV+ F
Sbjct: 168 RNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 226
Query: 124 GVVALEVLM 132
GV E+LM
Sbjct: 227 GVCMWEILM 235
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Query: 39 IVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLA 98
+ K AL+YLH + I+HRD +ADFGV+ R
Sbjct: 140 VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI 196
Query: 99 GTYGYIAPELAYTMVVTE-----KSDVYSFGVVALEVLMGKHP 136
GT ++APE+ + K+DV+S G+ +E+ + P
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 38 NIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLL 97
+ KGMA S +C +HRD + DFG+AR + DS+ ++
Sbjct: 176 QVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARHIKNDSN--YVV 226
Query: 98 AGT----YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
G ++APE + V T +SDV+S+G+ E+ +G P
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+++I E +G L L+ LD A + ++ AL+YL + VHRD
Sbjct: 90 VWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA 144
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY--GYIAPELAYTMVVTEKSDVYSF 123
+ DFG++R + DS+ G ++APE T SDV+ F
Sbjct: 145 RNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 203
Query: 124 GVVALEVLM 132
GV E+LM
Sbjct: 204 GVCMWEILM 212
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
R+ + LI EY+ GSL L+ +E + D K + + + YL T +HR+
Sbjct: 86 RRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---GTKRYIHRN 140
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYI---APELAYTMVVTEKSD 119
+ DFG+ ++L D + I APE + SD
Sbjct: 141 LATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASD 200
Query: 120 VYSFGVVALEVL 131
V+SFGVV E+
Sbjct: 201 VWSFGVVLYELF 212
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 34 AKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSN 93
+K + + +A ++YL+ + VHRD + DFG+ R +
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 94 RTLLAG--TYGYIAPELAYTMVVTEKSDVYSFGVVALEV-LMGKHPGELLSSSS 144
R G +++PE V T SDV+SFGVV E+ + + P + LS+
Sbjct: 180 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 233
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 34 AKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSN 93
+K + + +A ++YL+ + VHRD + DFG+ R +
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 188
Query: 94 RTLLAG--TYGYIAPELAYTMVVTEKSDVYSFGVVALEV-LMGKHPGELLSSSS 144
R G +++PE V T SDV+SFGVV E+ + + P + LS+
Sbjct: 189 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 242
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 38 NIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLL 97
+ KGMA S +C +HRD + DFG+AR + DS+ ++
Sbjct: 176 QVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN--YVV 226
Query: 98 AGT----YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
G ++APE + V T +SDV+S+G+ E+ +G P
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 38 NIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLL 97
+ KGMA S +C +HRD + DFG+AR + DS+ ++
Sbjct: 153 QVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN--YVV 203
Query: 98 AGT----YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
G ++APE + V T +SDV+S+G+ E+ +G P
Sbjct: 204 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLL--NFDSSNRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + + D + ++APE + V T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 230 QSDVWSFGVLLWEIFSLGASP 250
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + D + ++APE + V T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 230 QSDVWSFGVLLWEIFSLGASP 250
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 17/139 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHA-LSYLHHDCTPPIVHRDXX 64
++LI Y E GSL+ L+ L V+ G+AH + P I HRD
Sbjct: 81 LWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFK 140
Query: 65 XXXXXXXXXXXAFVADFGVARL-------LNFDSSNRTLLAGTYGYIAPELAYTMVVTE- 116
+AD G+A + L+ ++ R GT Y+APE+ + T+
Sbjct: 141 SRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV---GTKRYMAPEVLDEQIRTDC 197
Query: 117 -----KSDVYSFGVVALEV 130
+D+++FG+V E+
Sbjct: 198 FESYKWTDIWAFGLVLWEI 216
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 21/124 (16%)
Query: 20 CVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVA 79
C L E V L +I +A A+ +LH ++HRD V
Sbjct: 156 CSLEDREHGVCL------HIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVG 206
Query: 80 DFGVARLLNFDSSNRTLLA------------GTYGYIAPELAYTMVVTEKSDVYSFGVVA 127
DFG+ ++ D +T+L GT Y++PE + + K D++S G++
Sbjct: 207 DFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLIL 266
Query: 128 LEVL 131
E+L
Sbjct: 267 FELL 270
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLL--NFDSSNRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + + D + ++APE + V T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 230 QSDVWSFGVLLWEIFSLGASP 250
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++ + +Y+ G LF L+ E L+ R + +A AL YLH + IV+RD
Sbjct: 114 LYFVLDYINGGELFYHLQ--RERCFLEPRARFYAAE-IASALGYLH---SLNIVYRDLKP 167
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ DFG+ + +S + GT Y+APE+ + D + G
Sbjct: 168 ENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGA 227
Query: 126 VALEVLMGKHP 136
V E+L G P
Sbjct: 228 VLYEMLYGLPP 238
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + D + ++APE + V T
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 221 QSDVWSFGVLLWEIFSLGASP 241
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + D + ++APE + V T
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 221 QSDVWSFGVLLWEIFSLGASP 241
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + D + ++APE + V T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 230 QSDVWSFGVLLWEIFSLGASP 250
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 35/79 (44%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I++RD +ADFG+ + D GT YIAPE+ +
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKS 200
Query: 118 SDVYSFGVVALEVLMGKHP 136
D +++GV+ E+L G+ P
Sbjct: 201 VDWWAYGVLLYEMLAGQPP 219
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Query: 39 IVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLA 98
+ K AL+YLH + I+HRD +ADFGV+ R
Sbjct: 140 VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI 196
Query: 99 GTYGYIAPELAYTMVVTE-----KSDVYSFGVVALEVLMGKHP 136
GT ++APE+ + K+DV+S G+ +E+ + P
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Query: 39 IVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLA 98
+ K AL+YLH + I+HRD +ADFGV+ R
Sbjct: 140 VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 196
Query: 99 GTYGYIAPELAYTMVVTE-----KSDVYSFGVVALEVLMGKHP 136
GT ++APE+ + K+DV+S G+ +E+ + P
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 51/129 (39%), Gaps = 12/129 (9%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKR--VNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
LI E++ GSL L ++ + L + V I KGM + S + VHRD
Sbjct: 102 LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY-------VHRDLAA 154
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG---YIAPELAYTMVVTEKSDVYS 122
+ DFG+ + + D T+ + APE SDV+S
Sbjct: 155 RNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWS 214
Query: 123 FGVVALEVL 131
FGV E+L
Sbjct: 215 FGVTLHELL 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 51/129 (39%), Gaps = 12/129 (9%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKR--VNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
LI E++ GSL L ++ + L + V I KGM + S + VHRD
Sbjct: 90 LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY-------VHRDLAA 142
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG---YIAPELAYTMVVTEKSDVYS 122
+ DFG+ + + D T+ + APE SDV+S
Sbjct: 143 RNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWS 202
Query: 123 FGVVALEVL 131
FGV E+L
Sbjct: 203 FGVTLHELL 211
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 17/150 (11%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLD-------WAKRVNIVKGMAHALSYLHHDCTPPIV 59
+I E M G L LR+ A+ + +K + + +A ++YL+ + V
Sbjct: 94 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFV 150
Query: 60 HRDXXXXXXXXXXXXXAFVADFGVARLLN----FDSSNRTLLAGTYGYIAPELAYTMVVT 115
HRD + DFG+ R + + + LL +++PE V T
Sbjct: 151 HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP--VRWMSPESLKDGVFT 208
Query: 116 EKSDVYSFGVVALEV-LMGKHPGELLSSSS 144
SDV+SFGVV E+ + + P + LS+
Sbjct: 209 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 238
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
+L+++ + G LF E+ V ++ + + L ++H IVHRD
Sbjct: 79 YLVFDLVTGGELF------EDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPE 132
Query: 67 XXXXXXXXXAF---VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSF 123
+ADFG+A + D AGT GY++PE+ + D+++
Sbjct: 133 NLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWAC 192
Query: 124 GVVALEVLMGKHP 136
GV+ +L+G P
Sbjct: 193 GVILYILLVGYPP 205
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 39 IVKGMAHALSYLHHDCTPPIVHRDXXXXXX---XXXXXXXAFVADFGVARLLNFDSSNRT 95
+++ + A+ YLH + IVHRD + DFG++++ + +
Sbjct: 111 VIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ--NGIMS 165
Query: 96 LLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
GT GY+APE+ ++ D +S GV+ +L G P
Sbjct: 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + D + ++APE + V T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 230 QSDVWSFGVLLWEIFSLGASP 250
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLL--NFDSSNRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + N D + ++APE + + +
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST 280
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
KSDV+S+GV+ E+ +G P
Sbjct: 281 KSDVWSYGVLLWEIFSLGGSP 301
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + D + ++APE + V T
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 221 QSDVWSFGVLLWEIFSLGASP 241
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY+ G LF ++ + E + ++ + + ++ AL +LH I++RD
Sbjct: 96 LYLILEYLSGGELF--MQLEREGIFMEDTACFYLAE-ISMALGHLHQKG---IIYRDLKP 149
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ DFG+ + D + GT Y+APE+ D +S G
Sbjct: 150 ENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGA 209
Query: 126 VALEVLMGKHP 136
+ ++L G P
Sbjct: 210 LMYDMLTGAPP 220
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + D + ++APE + V T
Sbjct: 172 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 231
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 232 QSDVWSFGVLLWEIFSLGASP 252
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++LI EY+ G LF L + E + ++ + + ++ AL +LH I++RD
Sbjct: 96 LYLILEYLSGGELFMQL--EREGIFMEDTACFYLAE-ISMALGHLHQKG---IIYRDLKP 149
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ DFG+ + D + GT Y+APE+ D +S G
Sbjct: 150 ENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGA 209
Query: 126 VALEVLMGKHP 136
+ ++L G P
Sbjct: 210 LMYDMLTGAPP 220
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 17/150 (11%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLD-------WAKRVNIVKGMAHALSYLHHDCTPPIV 59
+I E M G L LR+ A+ + +K + + +A ++YL+ + V
Sbjct: 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFV 160
Query: 60 HRDXXXXXXXXXXXXXAFVADFGVARLLN----FDSSNRTLLAGTYGYIAPELAYTMVVT 115
HRD + DFG+ R + + + LL +++PE V T
Sbjct: 161 HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP--VRWMSPESLKDGVFT 218
Query: 116 EKSDVYSFGVVALEV-LMGKHPGELLSSSS 144
SDV+SFGVV E+ + + P + LS+
Sbjct: 219 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + D + ++APE + V T
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 221 QSDVWSFGVLLWEIFSLGASP 241
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 6 MFLIYEYMEMGSLFCVLRTD----EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHR 61
++LI +++ G LF L + EE V A+ +A L +LH + I++R
Sbjct: 105 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE-------LALGLDHLH---SLGIIYR 154
Query: 62 DXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
D + DFG+++ GT Y+APE+ + +D +
Sbjct: 155 DLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWW 214
Query: 122 SFGVVALEVLMGKHP 136
S+GV+ E+L G P
Sbjct: 215 SYGVLMFEMLTGSLP 229
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + D + ++APE + V T
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 280 QSDVWSFGVLLWEIFSLGASP 300
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
+L+++ + G LF E+ V ++ + + L ++H IVHRD
Sbjct: 79 YLVFDLVTGGELF------EDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPE 132
Query: 67 X---XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSF 123
+ADFG+A + D AGT GY++PE+ + D+++
Sbjct: 133 NLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWAC 192
Query: 124 GVVALEVLMGKHP 136
GV+ +L+G P
Sbjct: 193 GVILYILLVGYPP 205
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + D + ++APE + V T
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 275 QSDVWSFGVLLWEIFSLGASP 295
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + D + ++APE + V T
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 273 QSDVWSFGVLLWEIFSLGASP 293
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EYM G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
VADFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIK---------VADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + D + ++APE + V T
Sbjct: 207 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 266
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 267 QSDVWSFGVLLWEIFSLGASP 287
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+ LI EY G +F L E A + + ++K + + YLH + IVH D
Sbjct: 104 IILILEYAAGGEIFS-LCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKP 159
Query: 66 XXXXXXXXX---XAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
+ DFG++R + R ++ GT Y+APE+ +T +D+++
Sbjct: 160 QNILLSSIYPLGDIKIVDFGMSRKIGHACELREIM-GTPEYLAPEILNYDPITTATDMWN 218
Query: 123 FGVVALEVLMGKHP 136
G++A +L P
Sbjct: 219 IGIIAYMLLTHTSP 232
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EYM G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
VADFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIK---------VADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + D + ++APE + V T
Sbjct: 166 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 225
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 226 QSDVWSFGVLLWEIFSLGASP 246
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + D + ++APE + V T
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 282 QSDVWSFGVLLWEIFSLGASP 302
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 37.4 bits (85), Expect = 0.003, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 6/135 (4%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHR 61
H + F++ EY G LF L + E D A+ + AL YLH + +V+R
Sbjct: 220 HDRLCFVM-EYANGGELFFHL-SRERVFSEDRARFYG--AEIVSALDYLHSE--KNVVYR 273
Query: 62 DXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
D + DFG+ + D + GT Y+APE+ D +
Sbjct: 274 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 333
Query: 122 SFGVVALEVLMGKHP 136
GVV E++ G+ P
Sbjct: 334 GLGVVMYEMMCGRLP 348
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 37.4 bits (85), Expect = 0.003, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 6/135 (4%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHR 61
H + F++ EY G LF L + E D A+ + AL YLH + +V+R
Sbjct: 223 HDRLCFVM-EYANGGELFFHL-SRERVFSEDRARFYG--AEIVSALDYLHSE--KNVVYR 276
Query: 62 DXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVY 121
D + DFG+ + D + GT Y+APE+ D +
Sbjct: 277 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 336
Query: 122 SFGVVALEVLMGKHP 136
GVV E++ G+ P
Sbjct: 337 GLGVVMYEMMCGRLP 351
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
F++ EY+ G LF + ++ A+R + + + A+ Y H +VHRD
Sbjct: 87 FMVMEYVSGGELFDYICKHGRVEEME-ARR--LFQQILSAVDYCHRHM---VVHRDLKPE 140
Query: 67 XXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPE-LAYTMVVTEKSDVYSFGV 125
A +ADFG++ +++ RT G+ Y APE ++ + + D++S GV
Sbjct: 141 NVLLDAHMNAKIADFGLSNMMSDGEFLRT-SCGSPNYAAPEVISGRLYAGPEVDIWSCGV 199
Query: 126 VALEVLMGKHP 136
+ +L G P
Sbjct: 200 ILYALLCGTLP 210
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 16/136 (11%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDW---AKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
+L+++ + G LF E+ V ++ A + ++ + +++Y H + IVHR+
Sbjct: 81 YLVFDLVTGGELF------EDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNL 131
Query: 64 XXXX---XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDV 120
+ADFG+A +N DS AGT GY++PE+ ++ D+
Sbjct: 132 KPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDI 190
Query: 121 YSFGVVALEVLMGKHP 136
++ GV+ +L+G P
Sbjct: 191 WACGVILYILLVGYPP 206
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 9/133 (6%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
+L+++ + G LF E+ V ++ + + L + H +VHRD
Sbjct: 79 YLVFDLVTGGELF------EDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPE 132
Query: 67 X---XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSF 123
+ADFG+A + D AGT GY++PE+ + D+++
Sbjct: 133 NLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWAC 192
Query: 124 GVVALEVLMGKHP 136
GV+ +L+G P
Sbjct: 193 GVILYILLVGYPP 205
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 16/136 (11%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDW---AKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
+L+++ + G LF E+ V ++ A + ++ + +++Y H + IVHR+
Sbjct: 80 YLVFDLVTGGELF------EDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNL 130
Query: 64 XXXX---XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDV 120
+ADFG+A +N DS AGT GY++PE+ ++ D+
Sbjct: 131 KPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDI 189
Query: 121 YSFGVVALEVLMGKHP 136
++ GV+ +L+G P
Sbjct: 190 WACGVILYILLVGYPP 205
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 5/129 (3%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
+ EY G LF L + E D A+ + AL YLH + +V+RD
Sbjct: 85 FVMEYANGGELFFHL-SRERVFSEDRARFYGA--EIVSALDYLHSEKN--VVYRDLKLEN 139
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVA 127
+ DFG+ + D + GT Y+APE+ D + GVV
Sbjct: 140 LMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 199
Query: 128 LEVLMGKHP 136
E++ G+ P
Sbjct: 200 YEMMCGRLP 208
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTE 116
+HRD + DFG+AR + D + ++APE + V T
Sbjct: 166 IHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 225
Query: 117 KSDVYSFGVVALEVL-MGKHP 136
+SDV+SFGV+ E+ +G P
Sbjct: 226 QSDVWSFGVLLWEIFSLGASP 246
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 16/136 (11%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDW---AKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
+L+++ + G LF E+ V ++ A + ++ + +++Y H + IVHR+
Sbjct: 81 YLVFDLVTGGELF------EDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNL 131
Query: 64 XXXX---XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDV 120
+ADFG+A +N DS AGT GY++PE+ ++ D+
Sbjct: 132 KPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDI 190
Query: 121 YSFGVVALEVLMGKHP 136
++ GV+ +L+G P
Sbjct: 191 WACGVILYILLVGYPP 206
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
M LI E++ G LF R E + A+ +N ++ L ++H IVH D
Sbjct: 123 MVLILEFLSGGELFD--RIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKP 177
Query: 66 XXXXXXXXXXAFVA--DFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSF 123
+ V DFG+A LN D + A T + APE+ V +D+++
Sbjct: 178 ENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA-TAEFAAPEIVDREPVGFYTDMWAI 236
Query: 124 GVVALEVLMGKHP 136
GV+ +L G P
Sbjct: 237 GVLGYVLLSGLSP 249
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 30/153 (19%)
Query: 4 KCMFLIYEYMEMGSLFCVLRT---------------------DEEAVGLDWAKRVNIVKG 42
K M L++EYM G L LR+ L A+++ I +
Sbjct: 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ 182
Query: 43 MAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG 102
+A ++YL VHRD +ADFG++R N S++ G
Sbjct: 183 VAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSR--NIYSADYYKADGNDA 237
Query: 103 ----YIAPELAYTMVVTEKSDVYSFGVVALEVL 131
++ PE + T +SDV+++GVV E+
Sbjct: 238 IPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 5/129 (3%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
+ EY G LF L + E D A+ + AL YLH + +V+RD
Sbjct: 87 FVMEYANGGELFFHL-SRERVFSEDRARFYGA--EIVSALDYLHSEKN--VVYRDLKLEN 141
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVA 127
+ DFG+ + D + GT Y+APE+ D + GVV
Sbjct: 142 LMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 201
Query: 128 LEVLMGKHP 136
E++ G+ P
Sbjct: 202 YEMMCGRLP 210
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 5/129 (3%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
+ EY G LF L + E D A+ + AL YLH + +V+RD
Sbjct: 86 FVMEYANGGELFFHL-SRERVFSEDRARFYGA--EIVSALDYLHSEKN--VVYRDLKLEN 140
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVA 127
+ DFG+ + D + GT Y+APE+ D + GVV
Sbjct: 141 LMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 200
Query: 128 LEVLMGKHP 136
E++ G+ P
Sbjct: 201 YEMMCGRLP 209
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 16/136 (11%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDW---AKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
+L+++ + G LF E+ V ++ A + ++ + +++Y H + IVHR+
Sbjct: 104 YLVFDLVTGGELF------EDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNL 154
Query: 64 XXXX---XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDV 120
+ADFG+A +N DS AGT GY++PE+ ++ D+
Sbjct: 155 KPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDI 213
Query: 121 YSFGVVALEVLMGKHP 136
++ GV+ +L+G P
Sbjct: 214 WACGVILYILLVGYPP 229
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXX---XXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG 102
A+ YLH IVHRD ++DFG++++ + S T GT G
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPG 183
Query: 103 YIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
Y+APE+ ++ D +S GV+A +L G P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 36.6 bits (83), Expect = 0.005, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXX-- 64
+L+ E G LF + + + +D A+ I++ + ++Y+H + IVHRD
Sbjct: 125 YLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKN---KIVHRDLKPE 178
Query: 65 -XXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVYS 122
+ DFG++ +F++S + GT YIAPE+ + EK DV+S
Sbjct: 179 NLLLESKSKDANIRIIDFGLST--HFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWS 235
Query: 123 FGVVALEVLMGKHP 136
GV+ +L G P
Sbjct: 236 TGVILYILLSGCPP 249
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 36.6 bits (83), Expect = 0.005, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXX-- 64
+L+ E G LF + + + +D A+ I++ + ++Y+H + IVHRD
Sbjct: 102 YLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKN---KIVHRDLKPE 155
Query: 65 -XXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVYS 122
+ DFG++ +F++S + GT YIAPE+ + EK DV+S
Sbjct: 156 NLLLESKSKDANIRIIDFGLST--HFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWS 212
Query: 123 FGVVALEVLMGKHP 136
GV+ +L G P
Sbjct: 213 TGVILYILLSGCPP 226
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 36.6 bits (83), Expect = 0.005, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXX-- 64
+L+ E G LF + + + +D A+ I++ + ++Y+H + IVHRD
Sbjct: 126 YLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKN---KIVHRDLKPE 179
Query: 65 -XXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVYS 122
+ DFG++ +F++S + GT YIAPE+ + EK DV+S
Sbjct: 180 NLLLESKSKDANIRIIDFGLST--HFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWS 236
Query: 123 FGVVALEVLMGKHP 136
GV+ +L G P
Sbjct: 237 TGVILYILLSGCPP 250
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXX---XXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG 102
A+ YLH IVHRD ++DFG++++ + S T GT G
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPG 183
Query: 103 YIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
Y+APE+ ++ D +S GV+A +L G P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXX---XXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG 102
A+ YLH IVHRD ++DFG++++ + S T GT G
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPG 183
Query: 103 YIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
Y+APE+ ++ D +S GV+A +L G P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 37 VNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL 96
+ + +A ++YL+ VHRD + DFG+ R + R
Sbjct: 130 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 186
Query: 97 LAG--TYGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHPGELLSSSS 144
G ++APE V T SD++SFGVV E+ + + P + LS+
Sbjct: 187 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 237
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXX---XXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG 102
A+ YLH IVHRD ++DFG++++ + S T GT G
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPG 183
Query: 103 YIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
Y+APE+ ++ D +S GV+A +L G P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-----TDEEAVGLDWAKRVNIVKGM--AHALSYLHHDC 54
++ + LI E + G LF L T+EEA ++ K+ I+ G+ H+L H D
Sbjct: 85 NKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQ--ILNGVYYLHSLQIAHFDL 140
Query: 55 TPP---IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT 111
P ++ R+ + DFG+A ++F + + + GT ++APE+
Sbjct: 141 KPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKNIF-GTPAFVAPEIVNY 191
Query: 112 MVVTEKSDVYSFGVVALEVLMGKHP 136
+ ++D++S GV+ +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASP 216
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 34 AKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLN----F 89
+K + + +A ++YL+ + VHRD + DFG+ R + +
Sbjct: 129 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 185
Query: 90 DSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEV-LMGKHPGELLSSSS 144
+ LL +++PE V T SDV+SFGVV E+ + + P + LS+
Sbjct: 186 RKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 239
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 37 VNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL 96
+ + +A ++YL+ VHRD + DFG+ R + R
Sbjct: 133 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 189
Query: 97 LAG--TYGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHPGELLSSSS 144
G ++APE V T SD++SFGVV E+ + + P + LS+
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 34 AKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLN----F 89
+K + + +A ++YL+ + VHRD + DFG+ R + +
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 90 DSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEV-LMGKHPGELLSSSS 144
+ LL +++PE V T SDV+SFGVV E+ + + P + LS+
Sbjct: 182 RKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 235
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 34 AKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLN----F 89
+K + + +A ++YL+ + VHRD + DFG+ R + +
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 188
Query: 90 DSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEV-LMGKHPGELLSSSS 144
+ LL +++PE V T SDV+SFGVV E+ + + P + LS+
Sbjct: 189 RKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 242
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 37 VNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL 96
+ + +A ++YL+ VHRD + DFG+ R + R
Sbjct: 133 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 189
Query: 97 LAG--TYGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHPGELLSSSS 144
G ++APE V T SD++SFGVV E+ + + P + LS+
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 34 AKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLN----F 89
+K + + +A ++YL+ + VHRD + DFG+ R + +
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 90 DSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEV-LMGKHPGELLSSSS 144
+ LL +++PE V T SDV+SFGVV E+ + + P + LS+
Sbjct: 188 RKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 241
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 34 AKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLN----F 89
+K + + +A ++YL+ + VHRD + DFG+ R + +
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 90 DSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEV-LMGKHPGELLSSSS 144
+ LL +++PE V T SDV+SFGVV E+ + + P + LS+
Sbjct: 182 RKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 235
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
+L+++ + G LF E+ V ++ + + L ++H IVHRD
Sbjct: 106 YLVFDLVTGGELF------EDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPE 159
Query: 67 XXXXXXX---XXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSF 123
+ADFG+A + + AGT GY++PE+ + D+++
Sbjct: 160 NLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWAC 219
Query: 124 GVVALEVLMGKHP 136
GV+ +L+G P
Sbjct: 220 GVILYILLVGYPP 232
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 36.2 bits (82), Expect = 0.006, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 39 IVKGMAHALSYLH-HDCTPPIVHRDXX---XXXXXXXXXXXAFVADFGVARLLNFDSSNR 94
I+K + ++YLH H+ IVHRD + DFG++ + +
Sbjct: 141 IIKQVLSGVTYLHKHN----IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMK 196
Query: 95 TLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
L GT YIAPE+ EK DV+S GV+ +L G P
Sbjct: 197 ERL-GTAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAGYPP 236
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 36.2 bits (82), Expect = 0.007, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 4/130 (3%)
Query: 8 LIYEYMEMGSL-FCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
L+ M G + + + DE+ G + + + L +LH I++RD
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPE 318
Query: 67 XXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVV 126
++D G+A L + AGT G++APEL D ++ GV
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378
Query: 127 ALEVLMGKHP 136
E++ + P
Sbjct: 379 LYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 36.2 bits (82), Expect = 0.007, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 4/130 (3%)
Query: 8 LIYEYMEMGSL-FCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
L+ M G + + + DE+ G + + + L +LH I++RD
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPE 318
Query: 67 XXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVV 126
++D G+A L + AGT G++APEL D ++ GV
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378
Query: 127 ALEVLMGKHP 136
E++ + P
Sbjct: 379 LYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 36.2 bits (82), Expect = 0.007, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 4/130 (3%)
Query: 8 LIYEYMEMGSL-FCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
L+ M G + + + DE+ G + + + L +LH I++RD
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPE 318
Query: 67 XXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVV 126
++D G+A L + AGT G++APEL D ++ GV
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378
Query: 127 ALEVLMGKHP 136
E++ + P
Sbjct: 379 LYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 36.2 bits (82), Expect = 0.007, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 4/130 (3%)
Query: 8 LIYEYMEMGSL-FCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
L+ M G + + + DE+ G + + + L +LH I++RD
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPE 318
Query: 67 XXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVV 126
++D G+A L + AGT G++APEL D ++ GV
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378
Query: 127 ALEVLMGKHP 136
E++ + P
Sbjct: 379 LYEMIAARGP 388
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 34 AKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLN----F 89
+K + + +A ++YL+ + VHRD + DFG+ R + +
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 90 DSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEV-LMGKHPGELLSSSS 144
+ LL +++PE V T SDV+SFGVV E+ + + P + LS+
Sbjct: 188 RKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 241
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
+L+ E G LF + + + +D A+ I++ + ++Y+H + IVHRD
Sbjct: 108 YLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKN---KIVHRDLKPE 161
Query: 67 X---XXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVYS 122
+ DFG++ +F++S + GT YIAPE+ + EK DV+S
Sbjct: 162 NLLLESKSKDANIRIIDFGLS--THFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWS 218
Query: 123 FGVVALEVLMGKHP 136
GV+ +L G P
Sbjct: 219 TGVILYILLSGCPP 232
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-----TDEEAVGLDWAKRVNIVKGM--AHALSYLHHDC 54
++ + LI E + G LF L T+EEA ++ K+ I+ G+ H+L H D
Sbjct: 85 NKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQ--ILNGVYYLHSLQIAHFDL 140
Query: 55 TPP---IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT 111
P ++ R+ + DFG+A ++F + + + GT ++APE+
Sbjct: 141 KPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNY 191
Query: 112 MVVTEKSDVYSFGVVALEVLMGKHP 136
+ ++D++S GV+ +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASP 216
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 34 AKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSN 93
+K + + +A ++YL+ + VHRD + DFG+ R +
Sbjct: 138 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 94 RTLLAG--TYGYIAPELAYTMVVTEKSDVYSFGVVALEV-LMGKHPGELLSSSS 144
R G +++PE V T SDV+SFGVV E+ + + P + LS+
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-----TDEEAVGLDWAKRVNIVKGM--AHALSYLHHDC 54
++ + LI E + G LF L T+EEA ++ K+ I+ G+ H+L H D
Sbjct: 85 NKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQ--ILNGVYYLHSLQIAHFDL 140
Query: 55 TPP---IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT 111
P ++ R+ + DFG+A ++F + + + GT ++APE+
Sbjct: 141 KPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNY 191
Query: 112 MVVTEKSDVYSFGVVALEVLMGKHP 136
+ ++D++S GV+ +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASP 216
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 34 AKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLN----F 89
+K + + +A ++YL+ + VHRD + DFG+ R + +
Sbjct: 160 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 216
Query: 90 DSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEV-LMGKHPGELLSSSS 144
+ LL +++PE V T SDV+SFGVV E+ + + P + LS+
Sbjct: 217 RKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 270
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 28/154 (18%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-------------TDEEAVGLDWAKRVNIVKGMAHALS 48
HR ++L EY G+L LR + A L + ++ +A +
Sbjct: 97 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD 156
Query: 49 YLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG-----Y 103
YL +HRD A +ADFG++R + T G +
Sbjct: 157 YLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR------GQEVYVKKTMGRLPVRW 207
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+A E V T SDV+S+GV+ E++ +G P
Sbjct: 208 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 28/154 (18%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-------------TDEEAVGLDWAKRVNIVKGMAHALS 48
HR ++L EY G+L LR + A L + ++ +A +
Sbjct: 87 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD 146
Query: 49 YLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG-----Y 103
YL +HRD A +ADFG++R + T G +
Sbjct: 147 YLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR------GQEVYVKKTMGRLPVRW 197
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+A E V T SDV+S+GV+ E++ +G P
Sbjct: 198 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-----TDEEAVGLDWAKRVNIVKGM--AHALSYLHHDC 54
++ + LI E + G LF L T+EEA ++ K+ I+ G+ H+L H D
Sbjct: 85 NKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQ--ILNGVYYLHSLQIAHFDL 140
Query: 55 TPP---IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT 111
P ++ R+ + DFG+A ++F + + + GT ++APE+
Sbjct: 141 KPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNY 191
Query: 112 MVVTEKSDVYSFGVVALEVLMGKHP 136
+ ++D++S GV+ +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-----TDEEAVGLDWAKRVNIVKGM--AHALSYLHHDC 54
++ + LI E + G LF L T+EEA ++ K+ I+ G+ H+L H D
Sbjct: 85 NKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQ--ILNGVYYLHSLQIAHFDL 140
Query: 55 TPP---IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT 111
P ++ R+ + DFG+A ++F + + + GT ++APE+
Sbjct: 141 KPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNY 191
Query: 112 MVVTEKSDVYSFGVVALEVLMGKHP 136
+ ++D++S GV+ +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASP 216
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT LAGT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLAGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-----TDEEAVGLDWAKRVNIVKGM--AHALSYLHHDC 54
++ + LI E + G LF L T+EEA ++ K+ I+ G+ H+L H D
Sbjct: 85 NKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQ--ILNGVYYLHSLQIAHFDL 140
Query: 55 TPP---IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT 111
P ++ R+ + DFG+A ++F + + + GT ++APE+
Sbjct: 141 KPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNY 191
Query: 112 MVVTEKSDVYSFGVVALEVLMGKHP 136
+ ++D++S GV+ +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-----TDEEAVGLDWAKRVNIVKGM--AHALSYLHHDC 54
++ + LI E + G LF L T+EEA ++ K+ I+ G+ H+L H D
Sbjct: 84 NKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQ--ILNGVYYLHSLQIAHFDL 139
Query: 55 TPP---IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT 111
P ++ R+ + DFG+A ++F + + + GT ++APE+
Sbjct: 140 KPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNY 190
Query: 112 MVVTEKSDVYSFGVVALEVLMGKHP 136
+ ++D++S GV+ +L G P
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASP 215
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-----TDEEAVGLDWAKRVNIVKGM--AHALSYLHHDC 54
++ + LI E + G LF L T+EEA ++ K+ I+ G+ H+L H D
Sbjct: 85 NKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQ--ILNGVYYLHSLQIAHFDL 140
Query: 55 TPP---IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT 111
P ++ R+ + DFG+A ++F + + + GT ++APE+
Sbjct: 141 KPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNY 191
Query: 112 MVVTEKSDVYSFGVVALEVLMGKHP 136
+ ++D++S GV+ +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-----TDEEAVGLDWAKRVNIVKGM--AHALSYLHHDC 54
++ + LI E + G LF L T+EEA ++ K+ I+ G+ H+L H D
Sbjct: 85 NKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQ--ILNGVYYLHSLQIAHFDL 140
Query: 55 TPP---IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT 111
P ++ R+ + DFG+A ++F + + + GT ++APE+
Sbjct: 141 KPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNY 191
Query: 112 MVVTEKSDVYSFGVVALEVLMGKHP 136
+ ++D++S GV+ +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-----TDEEAVGLDWAKRVNIVKGM--AHALSYLHHDC 54
++ + LI E + G LF L T+EEA ++ K+ I+ G+ H+L H D
Sbjct: 85 NKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQ--ILNGVYYLHSLQIAHFDL 140
Query: 55 TPP---IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT 111
P ++ R+ + DFG+A ++F + + + GT ++APE+
Sbjct: 141 KPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNY 191
Query: 112 MVVTEKSDVYSFGVVALEVLMGKHP 136
+ ++D++S GV+ +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-----TDEEAVGLDWAKRVNIVKGM--AHALSYLHHDC 54
++ + LI E + G LF L T+EEA ++ K+ I+ G+ H+L H D
Sbjct: 84 NKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQ--ILNGVYYLHSLQIAHFDL 139
Query: 55 TPP---IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT 111
P ++ R+ + DFG+A ++F + + + GT ++APE+
Sbjct: 140 KPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNY 190
Query: 112 MVVTEKSDVYSFGVVALEVLMGKHP 136
+ ++D++S GV+ +L G P
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASP 215
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 8/131 (6%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
F++ EY+ G LF + ++ A+R + + + A+ Y H +VHRD
Sbjct: 87 FMVMEYVSGGELFDYICKHGRVEEME-ARR--LFQQILSAVDYCHRHM---VVHRDLKPE 140
Query: 67 XXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPE-LAYTMVVTEKSDVYSFGV 125
A +ADFG++ +++ D G+ Y APE ++ + + D++S GV
Sbjct: 141 NVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGV 199
Query: 126 VALEVLMGKHP 136
+ +L G P
Sbjct: 200 ILYALLCGTLP 210
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIA 105
AL YLH + +V+RD + DFG+ + D + GT Y+A
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 106 PELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
PE+ D + GVV E++ G+ P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 39 IVKGMAHALSYLHHDCTPPIVHRDXXXXXX---XXXXXXXAFVADFGVARLLNFDSSNRT 95
+++ + A+ YLH IVHRD ++DFG++++ T
Sbjct: 125 LIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMST 181
Query: 96 LLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
GT GY+APE+ ++ D +S GV+A +L G P
Sbjct: 182 A-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 9/98 (9%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXX-XXXAFVADFGVARLLNFDSSNRTLLAGTY-- 101
L YLH T I+H D A + DFG A L D ++LL G Y
Sbjct: 161 EGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217
Query: 102 ---GYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++APE+ K D++S + L +L G HP
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-----TDEEAVGLDWAKRVNIVKGM--AHALSYLHHDC 54
++ + LI E + G LF L T+EEA ++ K+ I+ G+ H+L H D
Sbjct: 85 NKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQ--ILNGVYYLHSLQIAHFDL 140
Query: 55 TPP---IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT 111
P ++ R+ + DFG+A ++F + + + GT ++APE+
Sbjct: 141 KPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNY 191
Query: 112 MVVTEKSDVYSFGVVALEVLMGKHP 136
+ ++D++S GV+ +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASP 216
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 9/98 (9%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXX-XXXAFVADFGVARLLNFDSSNRTLLAGTY-- 101
L YLH T I+H D A + DFG A L D ++LL G Y
Sbjct: 175 EGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 231
Query: 102 ---GYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++APE+ K D++S + L +L G HP
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-----TDEEAVGLDWAKRVNIVKGM--AHALSYLHHDC 54
++ + LI E + G LF L T+EEA ++ K+ I+ G+ H+L H D
Sbjct: 85 NKTDVILILELVAGGELFDFLAEKESLTEEEAT--EFLKQ--ILNGVYYLHSLQIAHFDL 140
Query: 55 TPP---IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT 111
P ++ R+ + DFG+A ++F + + + GT ++APE+
Sbjct: 141 KPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNY 191
Query: 112 MVVTEKSDVYSFGVVALEVLMGKHP 136
+ ++D++S GV+ +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASP 216
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIA 105
AL YLH + +V+RD + DFG+ + D + GT Y+A
Sbjct: 122 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 178
Query: 106 PELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
PE+ D + GVV E++ G+ P
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXX-XXXAFVADFGVARLLNFDSSNRTLLAGTY--- 101
L YLH T I+H D A + DFG A L D ++LL G Y
Sbjct: 178 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 102 --GYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
++APE+ K D++S + L +L G HP
Sbjct: 235 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 78 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMG 133
V DFG A +D + + L T Y APE+ + ++ DV+S G + +E +G
Sbjct: 178 VVDFGSA---TYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Query: 39 IVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLA 98
+V + L Y+H + I+HRD + DFG+AR + T
Sbjct: 136 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQAD---EEMTGYV 189
Query: 99 GTYGYIAPELAYT-MVVTEKSDVYSFGVVALEVLMGK 134
T Y APE+ M + D++S G + E+L GK
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 31/157 (19%)
Query: 6 MFLIYEYMEMGSLFCVLR-----------------------TDEEAVGLDWAKRVNIVKG 42
+ LI EY + GSL LR DE A+ + ++
Sbjct: 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM--GDLISFAWQ 158
Query: 43 MAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGT 100
++ + YL +VHRD ++DFG++R + + S R+
Sbjct: 159 ISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIP 215
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
++A E + + T +SDV+SFGV+ E++ +G +P
Sbjct: 216 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
VADFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIK---------VADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 55/145 (37%), Gaps = 13/145 (8%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKR--VNIVKGMAHALSYLHHDCTPPIVHRDX 63
M ++ E +GSL LR + L R V + +GM + S +HRD
Sbjct: 85 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR-------FIHRDL 137
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
+ DFG+ R L + + + + + APE T + SD
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 121 YSFGVVALEVLM-GKHPGELLSSSS 144
+ FGV E+ G+ P L+ S
Sbjct: 198 WMFGVTLWEMFTYGQEPWIGLNGSQ 222
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 76 AFVADFGVARLLNFDSSNRTLLAGTY-----GYIAPELAYTMVVTEKSDVYSFGVVALEV 130
A + DFG A L D ++LL G Y ++APE+ K DV+S + L +
Sbjct: 225 AALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHM 284
Query: 131 LMGKHP 136
L G HP
Sbjct: 285 LNGCHP 290
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 31/157 (19%)
Query: 6 MFLIYEYMEMGSLFCVLR-----------------------TDEEAVGLDWAKRVNIVKG 42
+ LI EY + GSL LR DE A+ + ++
Sbjct: 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM--GDLISFAWQ 158
Query: 43 MAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGT 100
++ + YL +VHRD ++DFG++R + + S R+
Sbjct: 159 ISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIP 215
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
++A E + + T +SDV+SFGV+ E++ +G +P
Sbjct: 216 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Query: 39 IVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLA 98
+V + L Y+H + I+HRD + DFG+AR + T
Sbjct: 136 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQAD---EEMTGYV 189
Query: 99 GTYGYIAPELAYT-MVVTEKSDVYSFGVVALEVLMGK 134
T Y APE+ M + D++S G + E+L GK
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 31/157 (19%)
Query: 6 MFLIYEYMEMGSLFCVLR-----------------------TDEEAVGLDWAKRVNIVKG 42
+ LI EY + GSL LR DE A+ + ++
Sbjct: 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM--GDLISFAWQ 158
Query: 43 MAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSS--NRTLLAGT 100
++ + YL +VHRD ++DFG++R + + S R+
Sbjct: 159 ISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIP 215
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
++A E + + T +SDV+SFGV+ E++ +G +P
Sbjct: 216 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 35.4 bits (80), Expect = 0.012, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXX-- 64
+L+ E G LF + + + +D A+ I++ + ++Y H + IVHRD
Sbjct: 102 YLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYXHKN---KIVHRDLKPE 155
Query: 65 -XXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVYS 122
+ DFG++ +F++S + GT YIAPE+ + EK DV+S
Sbjct: 156 NLLLESKSKDANIRIIDFGLST--HFEASKKXKDKIGTAYYIAPEVLHG-TYDEKCDVWS 212
Query: 123 FGVVALEVLMGKHP 136
GV+ +L G P
Sbjct: 213 TGVILYILLSGCPP 226
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIA 105
AL YLH + +V+RD + DFG+ + D + GT Y+A
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 173
Query: 106 PELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
PE+ D + GVV E++ G+ P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIA 105
AL YLH + +V+RD + DFG+ + D + GT Y+A
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 106 PELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
PE+ D + GVV E++ G+ P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIA 105
AL YLH + +V+RD + DFG+ + D + GT Y+A
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 106 PELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
PE+ D + GVV E++ G+ P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 55/145 (37%), Gaps = 13/145 (8%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKR--VNIVKGMAHALSYLHHDCTPPIVHRDX 63
M ++ E +GSL LR + L R V + +GM + S +HRD
Sbjct: 95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR-------FIHRDL 147
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
+ DFG+ R L + + + + + APE T + SD
Sbjct: 148 AARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDT 207
Query: 121 YSFGVVALEVLM-GKHPGELLSSSS 144
+ FGV E+ G+ P L+ S
Sbjct: 208 WMFGVTLWEMFTYGQEPWIGLNGSQ 232
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 35.0 bits (79), Expect = 0.013, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLL-AGTY--GYIAPELAYTMVVT 115
VHR+ A ++DFG+++ L D S T AG + + APE +
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 116 EKSDVYSFGVVALEVL-MGKHP 136
+SDV+S+GV E L G+ P
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKP 539
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIA 105
AL YLH + +V+RD + DFG+ + D + GT Y+A
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 173
Query: 106 PELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
PE+ D + GVV E++ G+ P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIA 105
AL YLH + +V+RD + DFG+ + D + GT Y+A
Sbjct: 120 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 176
Query: 106 PELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
PE+ D + GVV E++ G+ P
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-----TDEEAVGLDWAKRVNIVKGM--AHALSYLHHDC 54
++ + LI E + G LF L T+EEA ++ K+ I+ G+ H+L H D
Sbjct: 85 NKTDVILIGELVAGGELFDFLAEKESLTEEEAT--EFLKQ--ILNGVYYLHSLQIAHFDL 140
Query: 55 TPP---IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT 111
P ++ R+ + DFG+A ++F + + + GT ++APE+
Sbjct: 141 KPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKNIF-GTPEFVAPEIVNY 191
Query: 112 MVVTEKSDVYSFGVVALEVLMGKHP 136
+ ++D++S GV+ +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Query: 39 IVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLA 98
+V + L Y+H + I+HRD + DFG+AR + T
Sbjct: 128 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD---EEMTGYV 181
Query: 99 GTYGYIAPELAYT-MVVTEKSDVYSFGVVALEVLMGK 134
T Y APE+ M + D++S G + E+L GK
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 55/145 (37%), Gaps = 13/145 (8%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKR--VNIVKGMAHALSYLHHDCTPPIVHRDX 63
M ++ E +GSL LR + L R V + +GM + S +HRD
Sbjct: 85 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR-------FIHRDL 137
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
+ DFG+ R L + + + + + APE T + SD
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 121 YSFGVVALEVLM-GKHPGELLSSSS 144
+ FGV E+ G+ P L+ S
Sbjct: 198 WMFGVTLWEMFTYGQEPWIGLNGSQ 222
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 117 LYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
VADFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 177 QQGYIK---------VADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 78 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMG 133
VADFG A FD + T + T Y PE+ + + DV+S G + E G
Sbjct: 183 VADFGSA---TFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 78 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMG 133
VADFG A FD + T + T Y PE+ + + DV+S G + E G
Sbjct: 192 VADFGSA---TFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 55/145 (37%), Gaps = 13/145 (8%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKR--VNIVKGMAHALSYLHHDCTPPIVHRDX 63
M ++ E +GSL LR + L R V + +GM + S +HRD
Sbjct: 89 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR-------FIHRDL 141
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
+ DFG+ R L + + + + + APE T + SD
Sbjct: 142 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 201
Query: 121 YSFGVVALEVLM-GKHPGELLSSSS 144
+ FGV E+ G+ P L+ S
Sbjct: 202 WMFGVTLWEMFTYGQEPWIGLNGSQ 226
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHR 61
+R + LI E + G LF L E L + + +K + ++YLH T I H
Sbjct: 86 NRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLH---TKKIAHF 139
Query: 62 DXXXXXXXXXXXXXAF----VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
D + DFG+A + D + GT ++APE+ + +
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 118 SDVYSFGVVALEVLMGKHP 136
+D++S GV+ +L G P
Sbjct: 199 ADMWSIGVITYILLSGASP 217
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 55/145 (37%), Gaps = 13/145 (8%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKR--VNIVKGMAHALSYLHHDCTPPIVHRDX 63
M ++ E +GSL LR + L R V + +GM + S +HRD
Sbjct: 95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR-------FIHRDL 147
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
+ DFG+ R L + + + + + APE T + SD
Sbjct: 148 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 207
Query: 121 YSFGVVALEVLM-GKHPGELLSSSS 144
+ FGV E+ G+ P L+ S
Sbjct: 208 WMFGVTLWEMFTYGQEPWIGLNGSQ 232
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 55/145 (37%), Gaps = 13/145 (8%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKR--VNIVKGMAHALSYLHHDCTPPIVHRDX 63
M ++ E +GSL LR + L R V + +GM + S +HRD
Sbjct: 85 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR-------FIHRDL 137
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
+ DFG+ R L + + + + + APE T + SD
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 121 YSFGVVALEVLM-GKHPGELLSSSS 144
+ FGV E+ G+ P L+ S
Sbjct: 198 WMFGVTLWEMFTYGQEPWIGLNGSQ 222
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 55/145 (37%), Gaps = 13/145 (8%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKR--VNIVKGMAHALSYLHHDCTPPIVHRDX 63
M ++ E +GSL LR + L R V + +GM + S +HRD
Sbjct: 89 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR-------FIHRDL 141
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKSDV 120
+ DFG+ R L + + + + + APE T + SD
Sbjct: 142 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 201
Query: 121 YSFGVVALEVLM-GKHPGELLSSSS 144
+ FGV E+ G+ P L+ S
Sbjct: 202 WMFGVTLWEMFTYGQEPWIGLNGSQ 226
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 37 VNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL 96
+ + +A ++YL+ VHRD + DFG+ R + + R
Sbjct: 133 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKG 189
Query: 97 LAG--TYGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHPGELLSSSS 144
G ++APE V T SD++SFGVV E+ + + P + LS+
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 78 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMG 133
VADFG A FD + T + T Y PE+ + + DV+S G + E G
Sbjct: 215 VADFGSA---TFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 22/143 (15%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHH------DCTP 56
+ + L+ EY++ G LF R +E+ L + +K + + ++H D P
Sbjct: 158 KNDIVLVMEYVDGGELFD--RIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKP 215
Query: 57 P---IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMV 113
V+RD + DFG+AR + GT ++APE+
Sbjct: 216 ENILCVNRDAKQIK----------IIDFGLARRYKPREKLKVNF-GTPEFLAPEVVNYDF 264
Query: 114 VTEKSDVYSFGVVALEVLMGKHP 136
V+ +D++S GV+A +L G P
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHR 61
+R + LI E + G LF L E L + + +K + ++YLH T I H
Sbjct: 86 NRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLH---TKKIAHF 139
Query: 62 DXXXXXXXXXXXXXAF----VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
D + DFG+A + D + GT ++APE+ + +
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 118 SDVYSFGVVALEVLMGKHP 136
+D++S GV+ +L G P
Sbjct: 199 ADMWSIGVITYILLSGASP 217
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 34.3 bits (77), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 55/147 (37%), Gaps = 16/147 (10%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
FL+ + G L L+ E L + I A+ ++H PPI+HRD
Sbjct: 109 FLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVE 167
Query: 67 XXXXXXXXXAFVADFGVARLL------NFDSSNRTLLA------GTYGYIAPE---LAYT 111
+ DFG A + ++ + R L+ T Y PE L
Sbjct: 168 NLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSN 227
Query: 112 MVVTEKSDVYSFGVVALEVLMGKHPGE 138
+ EK D+++ G + + +HP E
Sbjct: 228 FPIGEKQDIWALGCILYLLCFRQHPFE 254
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 34.3 bits (77), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHR 61
+R + LI E + G LF L E L + + +K + ++YLH T I H
Sbjct: 86 NRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLH---TKKIAHF 139
Query: 62 DXXXXXXXXXXXXXAF----VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
D + DFG+A + D + GT ++APE+ + +
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 118 SDVYSFGVVALEVLMGKHP 136
+D++S GV+ +L G P
Sbjct: 199 ADMWSIGVITYILLSGASP 217
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG+A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGLAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 34.3 bits (77), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHR 61
+R + LI E + G LF L E L + + +K + ++YLH T I H
Sbjct: 86 NRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLH---TKKIAHF 139
Query: 62 DXXXXXXXXXXXXXAF----VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
D + DFG+A + D + GT ++APE+ + +
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 118 SDVYSFGVVALEVLMGKHP 136
+D++S GV+ +L G P
Sbjct: 199 ADMWSIGVITYILLSGASP 217
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 76 AFVADFGVARLLNFDSSNRTLLAGTY-----GYIAPELAYTMVVTEKSDVYSFGVVALEV 130
A + DFG A L D + LL G Y ++APE+ K DV+S + L +
Sbjct: 206 AALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHM 265
Query: 131 LMGKHP 136
L G HP
Sbjct: 266 LNGCHP 271
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 28/154 (18%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLR-------------TDEEAVGLDWAKRVNIVKGMAHALS 48
HR ++L EY G+L LR + A L + ++ +A +
Sbjct: 94 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD 153
Query: 49 YLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG-----Y 103
YL +HR+ A +ADFG++R + T G +
Sbjct: 154 YLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR------GQEVYVKKTMGRLPVRW 204
Query: 104 IAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+A E V T SDV+S+GV+ E++ +G P
Sbjct: 205 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 238
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 37 VNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLN----FDSS 92
+ + +A ++YL+ VHRD + DFG+ R + +
Sbjct: 132 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 188
Query: 93 NRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHPGELLSSSS 144
+ LL ++APE V T SD++SFGVV E+ + + P + LS+
Sbjct: 189 GKGLLP--VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 239
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHR 61
+R + LI E + G LF L E L + + +K + ++YLH T I H
Sbjct: 86 NRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLH---TKKIAHF 139
Query: 62 DXXXXXXXXXXXXXAF----VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
D + DFG+A + D + GT ++APE+ + +
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 118 SDVYSFGVVALEVLMGKHP 136
+D++S GV+ +L G P
Sbjct: 199 ADMWSIGVITYILLSGASP 217
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG+A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIK---------VTDFGLAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV--------NIVKGMAHALSYLHHDCTPP 57
+++IYEYME S +L+ DE LD I+K + ++ SY+H++
Sbjct: 118 VYIIYEYMENDS---ILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KN 172
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPEL--AYTMVVT 115
I HRD ++DFG + + D + GTY ++ PE +
Sbjct: 173 ICHRDVKPSNILMDKNGRVKLSDFGESEYM-VDKKIKG-SRGTYEFMPPEFFSNESSYNG 230
Query: 116 EKSDVYSFGV 125
K D++S G+
Sbjct: 231 AKVDIWSLGI 240
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 37 VNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLN----FDSS 92
+ + +A ++YL+ VHRD + DFG+ R + +
Sbjct: 133 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 189
Query: 93 NRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHPGELLSSSS 144
+ LL ++APE V T SD++SFGVV E+ + + P + LS+
Sbjct: 190 GKGLLP--VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 78 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMG 133
V DFG A FD + + + T Y APE+ + ++ DV+S G + E +G
Sbjct: 197 VVDFGSA---TFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 137 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 197 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 243
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 244 ALGVLIYEMAAGYPP 258
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 109 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 168
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 169 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 215
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 216 ALGVLIYEMAAGYPP 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 177 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 177 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 177 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 102 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 161
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 162 QQGYIQ---------VTDFGFAKRV----KGRTWTLCGTPEYLAPEIILSKGYNKAVDWW 208
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 209 ALGVLIYEMAAGYPP 223
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 177 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLXGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Query: 2 HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHR 61
+R + LI E + G LF L E L + + +K + ++YLH T I H
Sbjct: 86 NRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLH---TKKIAHF 139
Query: 62 DXXXXXXXXXXXXXAF----VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
D + DFG+A + D + GT ++APE+ + +
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 118 SDVYSFGVVALEVLMGKHP 136
+D++S GV+ +L G P
Sbjct: 199 ADMWSIGVITYILLSGASP 217
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 177 QQGYIQ---------VTDFGFAKRV----KGRTWTLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 39 IVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF---VADFGVARLLNFDSSNRT 95
I+K + ++Y+H IVHRD + DFG++ ++ +
Sbjct: 126 IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 96 LLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
+ GT YIAPE+ EK DV+S GV+ +L G P
Sbjct: 183 RI-GTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 177 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%)
Query: 48 SYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPE 107
S L H + ++HRD + D G+ R + ++ L GT Y++PE
Sbjct: 147 SALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 206
Query: 108 LAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
+ KSD++S G + E+ + P
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 39 IVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF---VADFGVARLLNFDSSNRT 95
I+K + ++Y+H IVHRD + DFG++ ++ +
Sbjct: 126 IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 96 LLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
+ GT YIAPE+ EK DV+S GV+ +L G P
Sbjct: 183 RI-GTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 109 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 168
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 169 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 215
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 216 ALGVLIYEMAAGYPP 230
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 9/133 (6%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXX 66
+LI++ + G LF E+ V ++ + + L + H +VHRD
Sbjct: 97 YLIFDLVTGGELF------EDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPE 150
Query: 67 XXXXXXXXXAF---VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSF 123
+ADFG+A + + AGT GY++PE+ + D+++
Sbjct: 151 NLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWAC 210
Query: 124 GVVALEVLMGKHP 136
GV+ +L+G P
Sbjct: 211 GVILYILLVGYPP 223
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIA 105
A+ Y H IVHRD +ADFG++ ++ D + G+ Y A
Sbjct: 120 AIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAA 175
Query: 106 PELAY-TMVVTEKSDVYSFGVVALEVLMGKHP 136
PE+ + + DV+S G+V +L+G+ P
Sbjct: 176 PEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 117 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 177 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 33.9 bits (76), Expect = 0.035, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
+V+RD ++D G+A +F GT+GY+APE+ V +
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASVGTHGYMAPEVLQKGVAYDS 370
Query: 118 S-DVYSFGVVALEVLMGKHP 136
S D +S G + ++L G P
Sbjct: 371 SADWFSLGCMLFKLLRGHSP 390
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 33.9 bits (76), Expect = 0.035, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
+V+RD ++D G+A +F GT+GY+APE+ V +
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASVGTHGYMAPEVLQKGVAYDS 370
Query: 118 S-DVYSFGVVALEVLMGKHP 136
S D +S G + ++L G P
Sbjct: 371 SADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 33.9 bits (76), Expect = 0.035, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
+V+RD ++D G+A +F GT+GY+APE+ V +
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASVGTHGYMAPEVLQKGVAYDS 370
Query: 118 S-DVYSFGVVALEVLMGKHP 136
S D +S G + ++L G P
Sbjct: 371 SADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 33.9 bits (76), Expect = 0.035, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
+V+RD ++D G+A +F GT+GY+APE+ V +
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASVGTHGYMAPEVLQKGVAYDS 369
Query: 118 S-DVYSFGVVALEVLMGKHP 136
S D +S G + ++L G P
Sbjct: 370 SADWFSLGCMLFKLLRGHSP 389
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 177 QQGYIK---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 177 QQGYIK---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 103 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 162
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 163 EQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 209
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 210 ALGVLIYEMAAGYPP 224
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIIISKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 137 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 197 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 243
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 244 ALGVLIYEMAAGYPP 258
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 33.5 bits (75), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIK---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 33.5 bits (75), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 177 QQGYIK---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 33.5 bits (75), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 33.5 bits (75), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 111 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 170
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 171 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 217
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 218 ALGVLIYEMAAGYPP 232
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 33.5 bits (75), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 33.5 bits (75), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIK---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 33.5 bits (75), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 177 QQGYIK---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 33.5 bits (75), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.5 bits (75), Expect = 0.044, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 13/138 (9%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLH-HDCTPPIVHR 61
++ +L+ E G LF + ++ +D A I+K + +YLH H+ IVHR
Sbjct: 76 KRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGTTYLHKHN----IVHR 128
Query: 62 DXX---XXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKS 118
D + DFG++ + L GT YIAPE+ EK
Sbjct: 129 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-GTAYYIAPEVLRKKY-DEKC 186
Query: 119 DVYSFGVVALEVLMGKHP 136
DV+S GV+ +L G P
Sbjct: 187 DVWSCGVILYILLCGYPP 204
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 118 SDVYSFGVVALEVLMG 133
D++S GV+ E++ G
Sbjct: 206 VDIWSVGVIMGEMIKG 221
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
L++E+++ + + E V + K +++ + L +LH + +VHRD
Sbjct: 96 LVFEHVDQDLTTYLDKVPEPGVPTETIK--DMMFQLLRGLDFLH---SHRVVHRDLKPQN 150
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVA 127
+ADFG+AR+ +F + +++ T Y APE+ D++S G +
Sbjct: 151 ILVTSSGQIKLADFGLARIYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIF 209
Query: 128 LEVLMGK 134
E+ K
Sbjct: 210 AEMFRRK 216
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
+ L++E+++ + + E V + K +++ + L +LH + +VHRD
Sbjct: 94 LTLVFEHVDQDLTTYLDKVPEPGVPTETIK--DMMFQLLRGLDFLH---SHRVVHRDLKP 148
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ADFG+AR+ +F + +++ T Y APE+ D++S G
Sbjct: 149 QNILVTSSGQIKLADFGLARIYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGC 207
Query: 126 VALEVLMGK 134
+ E+ K
Sbjct: 208 IFAEMFRRK 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
L++E+++ + + E V + K +++ + L +LH + +VHRD
Sbjct: 96 LVFEHVDQDLTTYLDKVPEPGVPTETIK--DMMFQLLRGLDFLH---SHRVVHRDLKPQN 150
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVA 127
+ADFG+AR+ +F + +++ T Y APE+ D++S G +
Sbjct: 151 ILVTSSGQIKLADFGLARIYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIF 209
Query: 128 LEVLMGK 134
E+ K
Sbjct: 210 AEMFRRK 216
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 118 SDVYSFGVVALEVLMG 133
D++S GV+ E++ G
Sbjct: 206 VDIWSVGVIMGEMIKG 221
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 33.1 bits (74), Expect = 0.058, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 39 IVKGMAHALSYLH-HDCTPPIVHRDXXXXXXXXXXXXXAF---VADFGVARLLNFDSSNR 94
I+K + ++Y+H H+ IVHRD + DFG++ ++ +
Sbjct: 126 IIKQVFSGITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK 181
Query: 95 TLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
+ GT YIAPE+ EK DV+S GV+ +L G P
Sbjct: 182 DRI-GTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 11/99 (11%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLL---NFDSSNRTLLAGTY 101
H+L+ +H D P + A ++DFG+ + L S R+ + GT
Sbjct: 135 HSLNIVHRDLKP----HNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 102 GYIAPELAYTMVVTEKS---DVYSFGVVALEVLM-GKHP 136
G+IAPE+ + D++S G V V+ G HP
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 78 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMG 133
V DFG A +D + + L Y APE+ + ++ DV+S G + +E +G
Sbjct: 178 VVDFGSA---TYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 32.7 bits (73), Expect = 0.066, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 46 ALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGYI 104
+L+Y+H + I HRD + DFG A+ L N + + Y Y
Sbjct: 213 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 268
Query: 105 APELAYTMV-VTEKSDVYSFGVVALEVLMGK--HPGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 305
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG-----YIAPELAYTMV 113
VHRD VADFG+AR + D ++ + + A E T
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQQHRHARLPVKWTALESLQTYR 204
Query: 114 VTEKSDVYSFGVVALEVLMGKHP 136
T KSDV+SFGV+ E+L P
Sbjct: 205 FTTKSDVWSFGVLLWELLTRGAP 227
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 32.7 bits (73), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ ++ G P
Sbjct: 223 ALGVLIYQMAAGYPP 237
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 32.7 bits (73), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 15/134 (11%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 137 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYS 122
V DFG A+ + L GT Y+APE+ + + D ++
Sbjct: 197 QQGYIQ---------VTDFGFAKRV---KGATWTLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 123 FGVVALEVLMGKHP 136
GV+ E+ G P
Sbjct: 245 LGVLIYEMAAGYPP 258
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 32.3 bits (72), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYG---YIAPELAYTMVVT 115
HRD A++ DFG+A T L T G Y APE T
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATT--DEKLTQLGNTVGTLYYXAPERFSESHAT 213
Query: 116 EKSDVYSFGVVALEVLMGKHP--GELLS 141
++D+Y+ V E L G P G+ LS
Sbjct: 214 YRADIYALTCVLYECLTGSPPYQGDQLS 241
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 32.3 bits (72), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 9/135 (6%)
Query: 8 LIYEYMEMGSLFCVL---RTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXX 64
+I +M+ G L L R E L V + +A + YL + +HRD
Sbjct: 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLA 164
Query: 65 XXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY--GYIAPELAYTMVVTEKSDVYS 122
VADFG++R + R A ++A E + T SDV++
Sbjct: 165 ARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWA 224
Query: 123 FGVVALEVLM-GKHP 136
FGV E++ G+ P
Sbjct: 225 FGVTMWEIMTRGQTP 239
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 32.3 bits (72), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 37 VNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLN----FDSS 92
+ + +A ++YL+ VHR+ + DFG+ R + +
Sbjct: 134 IQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 93 NRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHPGELLSSSS 144
+ LL ++APE V T SD++SFGVV E+ + + P + LS+
Sbjct: 191 GKGLLP--VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 241
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.3 bits (72), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 37 VNIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLN----FDSS 92
+ + +A ++YL+ VHR+ + DFG+ R + +
Sbjct: 133 IQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 189
Query: 93 NRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHPGELLSSSS 144
+ LL ++APE V T SD++SFGVV E+ + + P + LS+
Sbjct: 190 GKGLLP--VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 32.3 bits (72), Expect = 0.10, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 9/133 (6%)
Query: 7 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXX-- 64
+LI++ + G LF E+ V ++ + + L + H +VHR+
Sbjct: 86 YLIFDLVTGGELF------EDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPE 139
Query: 65 -XXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSF 123
+ADFG+A + + AGT GY++PE+ + D+++
Sbjct: 140 NLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWAC 199
Query: 124 GVVALEVLMGKHP 136
GV+ +L+G P
Sbjct: 200 GVILYILLVGYPP 212
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 13/138 (9%)
Query: 3 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLH-HDCTPPIVHR 61
++ +L+ E G LF + ++ +D A I+K + +YLH H+ IVHR
Sbjct: 93 KRNYYLVMEVYRGGELFDEIILRQKFSEVDAA---VIMKQVLSGTTYLHKHN----IVHR 145
Query: 62 DXXXXX---XXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKS 118
D + DFG++ + L GT YIAPE+ EK
Sbjct: 146 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-GTAYYIAPEVLRKKY-DEKC 203
Query: 119 DVYSFGVVALEVLMGKHP 136
DV+S GV+ +L G P
Sbjct: 204 DVWSCGVILYILLCGYPP 221
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 6/91 (6%)
Query: 45 HALSYLH-HDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGY 103
A+++ H H+C +HRD + DFG ARLL S T Y
Sbjct: 113 QAVNFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWY 168
Query: 104 IAPELAY-TMVVTEKSDVYSFGVVALEVLMG 133
+PEL DV++ G V E+L G
Sbjct: 169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 59 VHRDXXXXXXXXXXXXXAFVADFGVAR-LLNFDSSNRTLLAG-TYGYIAPELAYTMVVTE 116
+HRD VADFG+++ + + D + +A +IA E V T
Sbjct: 169 LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTS 228
Query: 117 KSDVYSFGVVALEVL---MGKHPG 137
KSDV++FGV E+ M +PG
Sbjct: 229 KSDVWAFGVTMWEIATRGMTPYPG 252
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 78 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK-SDVYSFGVVALEVLMGKHP 136
+ADFG ++ S ++ + GT YIAPE+ K +DV+S GV +L+G +P
Sbjct: 158 IADFGYSKASVLHSQPKSAV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
Query: 137 GE 138
E
Sbjct: 217 FE 218
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 9/136 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV--NIVKGMAHALSYLHHDCTPPIVHRDX 63
+++++E+M+ G+ C G +++ V + ++ + AL Y H + I+HRD
Sbjct: 101 LYMVFEFMD-GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDV 156
Query: 64 XXXXXXXXXXXXAF---VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDV 120
+ + DFGVA L GT ++APE+ + DV
Sbjct: 157 KPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDV 216
Query: 121 YSFGVVALEVLMGKHP 136
+ GV+ +L G P
Sbjct: 217 WGCGVILFILLSGCLP 232
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Query: 43 MAHALSYLHH-DCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGT 100
+ A++YL +C VHRD + DFG++R + + D ++
Sbjct: 122 ICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 177
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+++PE T SDV+ F V E+L GK P
Sbjct: 178 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 24/142 (16%)
Query: 8 LIYEYMEMGSL--FCVLRTDEEAVG-----------LDWAKRVNIVKGMAHALSYL--HH 52
+I+ Y G L F V+R+ VG L+ V++V +A + YL HH
Sbjct: 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH 165
Query: 53 DCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPELA 109
+VH+D ++D G+ R + + + LL + ++APE
Sbjct: 166 -----VVHKDLATRNVLVYDKLNVKISDLGLFREV-YAADYYKLLGNSLLPIRWMAPEAI 219
Query: 110 YTMVVTEKSDVYSFGVVALEVL 131
+ SD++S+GVV EV
Sbjct: 220 MYGKFSIDSDIWSYGVVLWEVF 241
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Query: 43 MAHALSYLHH-DCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGT 100
+ A++YL +C VHRD + DFG++R + + D ++
Sbjct: 118 ICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 173
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+++PE T SDV+ F V E+L GK P
Sbjct: 174 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Query: 43 MAHALSYLHH-DCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLL-NFDSSNRTLLAGT 100
+ A++YL +C VHRD + DFG++R + + D ++
Sbjct: 134 ICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 189
Query: 101 YGYIAPELAYTMVVTEKSDVYSFGVVALEVL-MGKHP 136
+++PE T SDV+ F V E+L GK P
Sbjct: 190 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 24/142 (16%)
Query: 8 LIYEYMEMGSL--FCVLRTDEEAVG-----------LDWAKRVNIVKGMAHALSYL--HH 52
+I+ Y G L F V+R+ VG L+ V++V +A + YL HH
Sbjct: 89 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH 148
Query: 53 DCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTY---GYIAPELA 109
+VH+D ++D G+ R + + + LL + ++APE
Sbjct: 149 -----VVHKDLATRNVLVYDKLNVKISDLGLFREV-YAADYYKLLGNSLLPIRWMAPEAI 202
Query: 110 YTMVVTEKSDVYSFGVVALEVL 131
+ SD++S+GVV EV
Sbjct: 203 MYGKFSIDSDIWSYGVVLWEVF 224
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR + + + Y Y APE+ M E
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRY-YRAPEVILGMGYKEN 203
Query: 118 SDVYSFGVVALEVLMG 133
D++S G + E++ G
Sbjct: 204 VDIWSVGCIMGELVKG 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 118 SDVYSFGVVALEVLMG 133
D++S G + E++ G
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRT----DEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
F++ E M G L LR + L +++ + +A YL + +HRD
Sbjct: 101 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRD 157
Query: 63 XXXXXXXXXXXXXAFVA---DFGVARLLNFDSSNRTLLAG--TYGYIAPELAYTMVVTEK 117
VA DFG+AR + S R ++ PE + T K
Sbjct: 158 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 217
Query: 118 SDVYSFGVVALEVL 131
+D +SFGV+ E+
Sbjct: 218 TDTWSFGVLLWEIF 231
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 118 SDVYSFGVVALEVLMG 133
D++S G + E++ G
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 118 SDVYSFGVVALEVLMG 133
D++S G + E++ G
Sbjct: 207 VDIWSVGCIMGEMIKG 222
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 118 SDVYSFGVVALEVLMG 133
D++S G + E++ G
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRT----DEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
F++ E M G L LR + L +++ + +A YL + +HRD
Sbjct: 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRD 165
Query: 63 XXXXXXXXXXXXXAFVA---DFGVARLLNFDSSNRTLLAG--TYGYIAPELAYTMVVTEK 117
VA DFG+AR + S R ++ PE + T K
Sbjct: 166 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 225
Query: 118 SDVYSFGVVALEVL 131
+D +SFGV+ E+
Sbjct: 226 TDTWSFGVLLWEIF 239
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRT----DEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
F++ E M G L LR + L +++ + +A YL + +HRD
Sbjct: 126 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRD 182
Query: 63 XXXXXXXXXXXXXAFVA---DFGVARLLNFDSSNRTLLAG--TYGYIAPELAYTMVVTEK 117
VA DFG+AR + S R ++ PE + T K
Sbjct: 183 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 242
Query: 118 SDVYSFGVVALEVL 131
+D +SFGV+ E+
Sbjct: 243 TDTWSFGVLLWEIF 256
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 137 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-Y 192
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 230
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 134 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-Y 189
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 227
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-Y 188
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-Y 188
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-Y 207
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 245
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-Y 222
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRT----DEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
F++ E M G L LR + L +++ + +A YL + +HRD
Sbjct: 124 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRD 180
Query: 63 XXXXXXXXXXXXXAFVA---DFGVARLLNFDSSNRTLLAG--TYGYIAPELAYTMVVTEK 117
VA DFG+AR + S R ++ PE + T K
Sbjct: 181 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 240
Query: 118 SDVYSFGVVALEVL 131
+D +SFGV+ E+
Sbjct: 241 TDTWSFGVLLWEIF 254
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-Y 188
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-Y 196
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 234
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 78 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH- 135
+ DFG A+ L N + + Y Y APEL + T DV+S G V E+L+G+
Sbjct: 164 LCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 136 -PGE 138
PG+
Sbjct: 223 FPGD 226
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-Y 200
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 238
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRT----DEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
F++ E M G L LR + L +++ + +A YL + +HRD
Sbjct: 109 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRD 165
Query: 63 XXXXXXXXXXXXXAFVA---DFGVARLLNFDSSNRTLLAG--TYGYIAPELAYTMVVTEK 117
VA DFG+AR + S R ++ PE + T K
Sbjct: 166 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 225
Query: 118 SDVYSFGVVALEVL 131
+D +SFGV+ E+
Sbjct: 226 TDTWSFGVLLWEIF 239
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 118 SDVYSFGVVALEVLMG 133
D++S G + E++ G
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-Y 200
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 238
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRT----DEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
F++ E M G L LR + L +++ + +A YL + +HRD
Sbjct: 110 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRD 166
Query: 63 XXXXXXXXXXXXXAFVA---DFGVARLLNFDSSNRTLLAG--TYGYIAPELAYTMVVTEK 117
VA DFG+AR + S R ++ PE + T K
Sbjct: 167 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 226
Query: 118 SDVYSFGVVALEVL 131
+D +SFGV+ E+
Sbjct: 227 TDTWSFGVLLWEIF 240
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRT----DEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
F++ E M G L LR + L +++ + +A YL + +HRD
Sbjct: 124 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRD 180
Query: 63 XXXXXXXXXXXXXAFVA---DFGVARLLNFDSSNRTLLAG--TYGYIAPELAYTMVVTEK 117
VA DFG+AR + S R ++ PE + T K
Sbjct: 181 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 240
Query: 118 SDVYSFGVVALEVL 131
+D +SFGV+ E+
Sbjct: 241 TDTWSFGVLLWEIF 254
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRT----DEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
F++ E M G L LR + L +++ + +A YL + +HRD
Sbjct: 116 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRD 172
Query: 63 XXXXXXXXXXXXXAFVA---DFGVARLLNFDSSNRTLLAG--TYGYIAPELAYTMVVTEK 117
VA DFG+AR + S R ++ PE + T K
Sbjct: 173 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 232
Query: 118 SDVYSFGVVALEVL 131
+D +SFGV+ E+
Sbjct: 233 TDTWSFGVLLWEIF 246
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 31.6 bits (70), Expect = 0.18, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 10/129 (7%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++L+ E M+ +L V++ + LD + ++ M + +LH + I+HRD
Sbjct: 142 VYLVMELMD-ANLCQVIQME-----LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 192
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ DFG+AR S T T Y APE+ M E D++S G
Sbjct: 193 SNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 251
Query: 126 VALEVLMGK 134
+ E++ K
Sbjct: 252 IMGEMVRHK 260
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRT----DEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
F++ E M G L LR + L +++ + +A YL + +HRD
Sbjct: 110 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRD 166
Query: 63 XXXXXXXXXXXXXAFVA---DFGVARLLNFDSSNRTLLAG--TYGYIAPELAYTMVVTEK 117
VA DFG+AR + S R ++ PE + T K
Sbjct: 167 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 226
Query: 118 SDVYSFGVVALEVL 131
+D +SFGV+ E+
Sbjct: 227 TDTWSFGVLLWEIF 240
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 118 SDVYSFGVVALEVLMG 133
D++S G + E++ G
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRT----DEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
F++ E M G L LR + L +++ + +A YL + +HRD
Sbjct: 124 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRD 180
Query: 63 XXXXXXXXXXXXXAFVA---DFGVARLLNFDSSNRTLLAG--TYGYIAPELAYTMVVTEK 117
VA DFG+AR + S R ++ PE + T K
Sbjct: 181 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 240
Query: 118 SDVYSFGVVALEVL 131
+D +SFGV+ E+
Sbjct: 241 TDTWSFGVLLWEIF 254
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 10/127 (7%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
L+ EY+ +GSL L ++GL A+ + + + ++YLH +HRD
Sbjct: 112 LVMEYVPLGSLRDYL--PRHSIGL--AQLLLFAQQICEGMAYLH---AQHYIHRDLAARN 164
Query: 68 XXXXXXXXAFVADFGVARLLNFDSSN---RTLLAGTYGYIAPELAYTMVVTEKSDVYSFG 124
+ DFG+A+ + R + APE SDV+SFG
Sbjct: 165 VLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFG 224
Query: 125 VVALEVL 131
V E+L
Sbjct: 225 VTLYELL 231
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 10/131 (7%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + L+ EY+ +GSL L ++GL A+ + + + ++YLH + +HR+
Sbjct: 91 KSLQLVMEYVPLGSLRDYL--PRHSIGL--AQLLLFAQQICEGMAYLH---SQHYIHRNL 143
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSN---RTLLAGTYGYIAPELAYTMVVTEKSDV 120
+ DFG+A+ + R + APE SDV
Sbjct: 144 AARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDV 203
Query: 121 YSFGVVALEVL 131
+SFGV E+L
Sbjct: 204 WSFGVTLYELL 214
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 118 SDVYSFGVVALEVLMG 133
D++S G + E++ G
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-Y 188
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-Y 188
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 171 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-Y 226
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 264
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-Y 222
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRT----DEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
F++ E M G L LR + L +++ + +A YL + +HRD
Sbjct: 136 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRD 192
Query: 63 XXXXXXXXXXXXXAFVA---DFGVARLLNFDSSNRTLLAG--TYGYIAPELAYTMVVTEK 117
VA DFG+AR + S R ++ PE + T K
Sbjct: 193 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 252
Query: 118 SDVYSFGVVALEVL 131
+D +SFGV+ E+
Sbjct: 253 TDTWSFGVLLWEIF 266
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 78 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH- 135
+ DFG A+ L N + + Y Y APEL + T DV+S G V E+L+G+
Sbjct: 164 LCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 136 -PGE 138
PG+
Sbjct: 223 FPGD 226
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 169 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-Y 224
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 225 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 262
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 146 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-Y 201
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 202 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 239
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 138 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-Y 193
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 231
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT Y+AP + + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPAIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPEVVTRYYRAPEVILGMGYKEN 205
Query: 118 SDVYSFGVVALEVLMG 133
D++S G + E++ G
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR + Y Y APE+ M E
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRY-YRAPEVILGMGYKEN 207
Query: 118 SDVYSFGVVALEVLMG 133
D++S G + E++ G
Sbjct: 208 VDIWSVGCIMGEMIKG 223
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 HALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAF-VADFGVARLLNFDSSNRTLLAGTYGY 103
+L+Y+H I HRD + DFG A+ L N + + Y Y
Sbjct: 161 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-Y 216
Query: 104 IAPELAYTMV-VTEKSDVYSFGVVALEVLMGKH--PGE 138
APEL + T DV+S G V E+L+G+ PG+
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 254
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
LI E + G LF L ++E++ D A +K + + YLH + I H D
Sbjct: 106 LILELVSGGELFDFL-AEKESLTEDEA--TQFLKQILDGVHYLH---SKRIAHFDLKPEN 159
Query: 68 XXXXXXXXAF----VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSF 123
+ DFG+A + + + + GT ++APE+ + ++D++S
Sbjct: 160 IMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSI 218
Query: 124 GVVALEVLMGKHP 136
GV+ +L G P
Sbjct: 219 GVITYILLSGASP 231
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
LI E + G LF L ++E++ D A +K + + YLH + I H D
Sbjct: 92 LILELVSGGELFDFL-AEKESLTEDEA--TQFLKQILDGVHYLH---SKRIAHFDLKPEN 145
Query: 68 XXXXXXXXAF----VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSF 123
+ DFG+A + + + + GT ++APE+ + ++D++S
Sbjct: 146 IMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSI 204
Query: 124 GVVALEVLMGKHP 136
GV+ +L G P
Sbjct: 205 GVITYILLSGASP 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 8 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXXXX 67
LI E + G LF L ++E++ D A +K + + YLH + I H D
Sbjct: 85 LILELVSGGELFDFL-AEKESLTEDEA--TQFLKQILDGVHYLH---SKRIAHFDLKPEN 138
Query: 68 XXXXXXXXAF----VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSF 123
+ DFG+A + + + + GT ++APE+ + ++D++S
Sbjct: 139 IMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSI 197
Query: 124 GVVALEVLMGKHP 136
GV+ +L G P
Sbjct: 198 GVITYILLSGASP 210
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 38 NIVKGMAHALSYLHHDCTPPIVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLL 97
+++KG + YLH+ I+HRD +ADFGV+ + +
Sbjct: 145 DLIKG----IEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT 197
Query: 98 AGTYGYIAPE-LAYTMVVTEKS--DVYSFGVVALEVLMGKHP 136
GT ++APE L+ T + DV++ GV + G+ P
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 78 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK-SDVYSFGVVALEVLMGKHP 136
+ DFG ++ S ++ + GT YIAPE+ K +DV+S GV +L+G +P
Sbjct: 159 ICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
Query: 137 GE 138
E
Sbjct: 218 FE 219
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 10/131 (7%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + L+ EY+ +GSL L ++GL A+ + + + ++YLH +HR+
Sbjct: 91 KSLQLVMEYVPLGSLRDYL--PRHSIGL--AQLLLFAQQICEGMAYLH---AQHYIHRNL 143
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSN---RTLLAGTYGYIAPELAYTMVVTEKSDV 120
+ DFG+A+ + R + APE SDV
Sbjct: 144 AARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDV 203
Query: 121 YSFGVVALEVL 131
+SFGV E+L
Sbjct: 204 WSFGVTLYELL 214
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 17/135 (12%)
Query: 6 MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
++++ EY+ G +F LR E +A ++ + H+L ++ D P + D
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 63 XXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKSDVY 121
V DFG A+ + RT L GT +APE+ + + D +
Sbjct: 176 QQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEALAPEIILSKGYNKAVDWW 222
Query: 122 SFGVVALEVLMGKHP 136
+ GV+ E+ G P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 98 AGTYGYIAPE-LAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
AGT G+ APE L T D++S GV+ L +L G++P
Sbjct: 207 AGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 78 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
+ DFG A+ L ++ T ++APE+ E D++S G++ +L G P
Sbjct: 166 ICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 78 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK-SDVYSFGVVALEVLMGKHP 136
+ DFG ++ S ++ + GT YIAPE+ K +DV+S GV +L+G +P
Sbjct: 157 ICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 215
Query: 137 GE 138
E
Sbjct: 216 FE 217
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++L+ E M+ +L V++ + LD + ++ M + +LH + I+HRD
Sbjct: 97 VYLVMELMD-ANLXQVIQME-----LDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKP 147
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ DFG+AR S T T Y APE+ M E D++S G
Sbjct: 148 SNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 206
Query: 126 VALEVLMGK 134
+ E++ K
Sbjct: 207 IMGEMVRHK 215
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 78 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
+ DFG A+ L ++ T ++APE+ E D++S G++ +L G P
Sbjct: 166 ICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 78 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK-SDVYSFGVVALEVLMGKHP 136
+ DFG ++ S ++ + GT YIAPE+ K +DV+S GV +L+G +P
Sbjct: 158 ICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
Query: 137 GE 138
E
Sbjct: 217 FE 218
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 30.0 bits (66), Expect = 0.43, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 99 GTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
GT GY+APE+ T D ++ G + E++ G+ P
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 30.0 bits (66), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++L+ E M+ +L V++ + LD + ++ M + +LH + I+HRD
Sbjct: 104 VYLVMELMD-ANLXQVIQME-----LDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKP 154
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ DFG+AR S T T Y APE+ M E D++S G
Sbjct: 155 SNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 126 VALEVLMGK 134
+ E++ K
Sbjct: 214 IMGEMVRHK 222
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 30.0 bits (66), Expect = 0.43, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 99 GTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
GT GY+APE+ T D ++ G + E++ G+ P
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDXXX 65
++L+ E M+ +L V++ + LD + ++ M + +LH + I+HRD
Sbjct: 104 VYLVMELMD-ANLXQVIQME-----LDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKP 154
Query: 66 XXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGV 125
+ DFG+AR S T T Y APE+ M E D++S G
Sbjct: 155 SNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 126 VALEVLMGK 134
+ E++ K
Sbjct: 214 IMGEMVRHK 222
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 118 SDVYSFGVVALEVLMGK 134
D++S G + E++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 12/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRT----DEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
F++ E M G L LR + L +++ + +A YL + +HRD
Sbjct: 127 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRD 183
Query: 63 XXXXXXXXXXXXXAFVA---DFGVARLLNFDSSNRTLLAG--TYGYIAPELAYTMVVTEK 117
VA DFG+AR + R ++ PE + T K
Sbjct: 184 IAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSK 243
Query: 118 SDVYSFGVVALEVL 131
+D +SFGV+ E+
Sbjct: 244 TDTWSFGVLLWEIF 257
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 53/142 (37%), Gaps = 28/142 (19%)
Query: 7 FLIYEYMEMGSLFCVLRT----DEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
F++ E M G L LR + L +++ + +A YL + +HRD
Sbjct: 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRD 206
Query: 63 XXXXXXXXXXXXXAFVA---DFGVARLLNFDSSNRTLLAGTY----------GYIAPELA 109
VA DFG+AR + AG Y ++ PE
Sbjct: 207 IAARNCLLTCPGPGRVAKIGDFGMARDI--------YRAGYYRKGGCAMLPVKWMPPEAF 258
Query: 110 YTMVVTEKSDVYSFGVVALEVL 131
+ T K+D +SFGV+ E+
Sbjct: 259 MEGIFTSKTDTWSFGVLLWEIF 280
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 29.6 bits (65), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 199
Query: 118 SDVYSFGVVALEVLMGK 134
D++S G + E++ K
Sbjct: 200 VDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 198
Query: 118 SDVYSFGVVALEVLMGK 134
D++S G + E++ K
Sbjct: 199 VDIWSVGCIMGEMVRHK 215
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 29.6 bits (65), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 199
Query: 118 SDVYSFGVVALEVLMGK 134
D++S G + E++ K
Sbjct: 200 VDIWSVGCIMGEMVRHK 216
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 29.6 bits (65), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 243
Query: 118 SDVYSFGVVALEVLMGK 134
D++S G + E++ K
Sbjct: 244 VDIWSVGCIMGEMVRHK 260
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 80 DFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMG 133
DFG A F S + T Y APE+ + SD++SFG V E+ G
Sbjct: 205 DFGCA---TFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 118 SDVYSFGVVALEVLMGK 134
D++S G + E++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 118 SDVYSFGVVALEVLMGK 134
D++S G + E++ K
Sbjct: 207 VDIWSVGCIMGEMVRHK 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 204
Query: 118 SDVYSFGVVALEVLMGK 134
D++S G + E++ K
Sbjct: 205 VDIWSVGCIMGEMVRHK 221
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 118 SDVYSFGVVALEVLMGK 134
D++S G + E++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 118 SDVYSFGVVALEVLMGK 134
D++S G + E++ K
Sbjct: 207 VDIWSVGCIMGEMVRHK 223
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 29.6 bits (65), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 7 FLIYEYMEMGSLFCVLRT----DEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRD 62
F++ E M G L LR + L +++ + +A YL + +HRD
Sbjct: 110 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRD 166
Query: 63 XXXXXXXXXXXXXAFVA---DFGVARLLNFDSSNRTLLAG--TYGYIAPELAYTMVVTEK 117
VA DFG+A+ + S R ++ PE + T K
Sbjct: 167 IAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 226
Query: 118 SDVYSFGVVALEVL 131
+D +SFGV+ E+
Sbjct: 227 TDTWSFGVLLWEIF 240
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 29.6 bits (65), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR S T T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 118 SDVYSFGVVALEVLMGK 134
D++S G + E++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEK 117
I+HRD + DFG+AR + Y Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-YRAPEVILGMGYKEN 205
Query: 118 SDVYSFGVVALEVLMGK 134
D++S G + E++ K
Sbjct: 206 VDIWSVGCIMGEMVCHK 222
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV--NIVKGMAHALSYLHHDCTPPIVHRDX 63
+++++E+M+ G+ C G +++ V + ++ + AL Y H + I+HRD
Sbjct: 103 LYMVFEFMD-GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDV 158
Query: 64 X---XXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDV 120
+ FGVA L GT ++APE+ + DV
Sbjct: 159 KPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDV 218
Query: 121 YSFGVVALEVLMGKHP 136
+ GV+ +L G P
Sbjct: 219 WGCGVILFILLSGCLP 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Query: 6 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRV--NIVKGMAHALSYLHHDCTPPIVHRDX 63
+++++E+M+ G+ C G +++ V + ++ + AL Y H + I+HRD
Sbjct: 101 LYMVFEFMD-GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDV 156
Query: 64 X---XXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDV 120
+ FGVA L GT ++APE+ + DV
Sbjct: 157 KPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDV 216
Query: 121 YSFGVVALEVLMGKHP 136
+ GV+ +L G P
Sbjct: 217 WGCGVILFILLSGCLP 232
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 10/131 (7%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + L+ EY+ +GSL L VGL A+ + + + ++YLH +HR
Sbjct: 85 KSVQLVMEYVPLGSLRDYL--PRHCVGL--AQLLLFAQQICEGMAYLH---AQHYIHRAL 137
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSN---RTLLAGTYGYIAPELAYTMVVTEKSDV 120
+ DFG+A+ + R + APE SDV
Sbjct: 138 AARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDV 197
Query: 121 YSFGVVALEVL 131
+SFGV E+L
Sbjct: 198 WSFGVTLYELL 208
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARL--LNFDSSNRTLLAGTYGYIAPELAYTMVVT 115
I+HRD + DFG+AR NF T T Y APE+ M
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF---MMTPYVVTRYYRAPEVILGMGYA 203
Query: 116 EKSDVYSFGVVALEVLMG 133
D++S G + E++ G
Sbjct: 204 ANVDIWSVGCIMGELVKG 221
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 10/131 (7%)
Query: 4 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNIVKGMAHALSYLHHDCTPPIVHRDX 63
K + L+ EY+ +GSL L VGL A+ + + + ++YLH +HR
Sbjct: 86 KSVQLVMEYVPLGSLRDYL--PRHCVGL--AQLLLFAQQICEGMAYLH---AQHYIHRAL 138
Query: 64 XXXXXXXXXXXXAFVADFGVARLLNFDSSN---RTLLAGTYGYIAPELAYTMVVTEKSDV 120
+ DFG+A+ + R + APE SDV
Sbjct: 139 AARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDV 198
Query: 121 YSFGVVALEVL 131
+SFGV E+L
Sbjct: 199 WSFGVTLYELL 209
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 78 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
+ DFG A+ L ++ T ++APE+ D++S GV+ +L G P
Sbjct: 161 ICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 78 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKSDVYSFGVVALEVLMGKHP 136
+ DFG A+ L ++ T ++APE+ D++S GV+ L G P
Sbjct: 161 ICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPE-LAYTMVVTE 116
++HRD +ADFG+AR T T Y AP+ L + +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 117 KSDVYSFGVVALEVLMG 133
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPE-LAYTMVVTE 116
++HRD +ADFG+AR T T Y AP+ L + +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 117 KSDVYSFGVVALEVLMG 133
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPE-LAYTMVVTE 116
++HRD +ADFG+AR T T Y AP+ L + +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 117 KSDVYSFGVVALEVLMG 133
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 99 GTYGYIAPELAYTMVVTEK-SDVYSFGVVALEVLMGKHPGE 138
GT YIAPE+ K +DV+S GV +L+G +P E
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 99 GTYGYIAPELAYTMVVTEK-SDVYSFGVVALEVLMGKHPGE 138
GT YIAPE+ K +DV+S GV +L+G +P E
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELA-----YTM 112
++HRD +ADFG+AR T T Y APE+ Y+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 113 VVTEKSDVYSFGVVALEVLMGK--HPGE 138
V D++S G + E++ + PG+
Sbjct: 184 AV----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELA-----YTM 112
++HRD +ADFG+AR T T Y APE+ Y+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 113 VVTEKSDVYSFGVVALEVLMGK--HPGE 138
V D++S G + E++ + PG+
Sbjct: 184 AV----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELA-----YTM 112
++HRD +ADFG+AR T T Y APE+ Y+
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 113 VVTEKSDVYSFGVVALEVLMGK--HPGE 138
V D++S G + E++ + PG+
Sbjct: 183 AV----DIWSLGCIFAEMVTRRALFPGD 206
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELA-----YTM 112
++HRD +ADFG+AR T T Y APE+ Y+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 113 VVTEKSDVYSFGVVALEVLMGK--HPGE 138
V D++S G + E++ + PG+
Sbjct: 184 AV----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELA-----YTM 112
++HRD +ADFG+AR T T Y APE+ Y+
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 113 VVTEKSDVYSFGVVALEVLMGK--HPGE 138
V D++S G + E++ + PG+
Sbjct: 183 AV----DIWSLGCIFAEMVTRRALFPGD 206
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELA-----YTM 112
++HRD +ADFG+AR T T Y APE+ Y+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 113 VVTEKSDVYSFGVVALEVLMGK--HPGE 138
V D++S G + E++ + PG+
Sbjct: 184 AV----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELA-----YTM 112
++HRD +ADFG+AR T T Y APE+ Y+
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 187
Query: 113 VVTEKSDVYSFGVVALEVLMGK--HPGE 138
V D++S G + E++ + PG+
Sbjct: 188 AV----DIWSLGCIFAEMVTRRALFPGD 211
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELA-----YTM 112
++HRD +ADFG+AR T T Y APE+ Y+
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 113 VVTEKSDVYSFGVVALEVLMGK--HPGE 138
V D++S G + E++ + PG+
Sbjct: 183 AV----DIWSLGCIFAEMVTRRALFPGD 206
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELA-----YTM 112
++HRD +ADFG+AR T T Y APE+ Y+
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 184
Query: 113 VVTEKSDVYSFGVVALEVLMGK--HPGE 138
V D++S G + E++ + PG+
Sbjct: 185 AV----DIWSLGCIFAEMVTRRALFPGD 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELA-----YTM 112
++HRD +ADFG+AR T T Y APE+ Y+
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 113 VVTEKSDVYSFGVVALEVLMGK--HPGE 138
V D++S G + E++ + PG+
Sbjct: 183 AV----DIWSLGCIFAEMVTRRALFPGD 206
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELA-----YTM 112
++HRD +ADFG+AR T T Y APE+ Y+
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 190
Query: 113 VVTEKSDVYSFGVVALEVLMGK--HPGE 138
V D++S G + E++ + PG+
Sbjct: 191 AV----DIWSLGCIFAEMVTRRALFPGD 214
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELA-----YTM 112
++HRD +ADFG+AR T T Y APE+ Y+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYST 183
Query: 113 VVTEKSDVYSFGVVALEVLMGK--HPGE 138
V D++S G + E++ + PG+
Sbjct: 184 AV----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 58 IVHRDXXXXXXXXXXXXXAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELA-----YTM 112
++HRD +ADFG+AR T T Y APE+ Y+
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYST 190
Query: 113 VVTEKSDVYSFGVVALEVLMGK--HPGE 138
V D++S G + E++ + PG+
Sbjct: 191 AV----DIWSLGCIFAEMVTRRALFPGD 214
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.138 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,823,250
Number of Sequences: 62578
Number of extensions: 122449
Number of successful extensions: 1343
Number of sequences better than 100.0: 784
Number of HSP's better than 100.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 349
Number of HSP's that attempted gapping in prelim test: 655
Number of HSP's gapped (non-prelim): 788
length of query: 144
length of database: 14,973,337
effective HSP length: 89
effective length of query: 55
effective length of database: 9,403,895
effective search space: 517214225
effective search space used: 517214225
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 46 (22.3 bits)