BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 044495
         (276 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P22242|DRPE_CRAPL Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum
           PE=2 SV=1
          Length = 313

 Score =  107 bits (268), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 117/264 (44%), Gaps = 51/264 (19%)

Query: 45  RDDVDNLQFAQSLEHLEAELFLGGGLGYGLDKVAPYL-----------KANLDNLTRAII 93
           + DV  L+F  +LE LEAE F     G G+D++ P L           KANL    R II
Sbjct: 37  KSDVSLLEFPLNLELLEAEFFAWAAFGKGIDELEPELAKGGPSPIGVQKANLSPFIRDII 96

Query: 94  TEFGYQEVGHLRCGHALLQCHK---VCASSRNF---LPSA------PIMTRY-------- 133
            +F YQE GH+R   + ++      +  S+++F   + SA      P    Y        
Sbjct: 97  AQFAYQEFGHVRAIQSSVEGFPRPLLDLSAKSFATVMDSAFGKTLKPPFDPYANDINYLL 156

Query: 134 --YMVPYVGLNGYTGSNPFLCGYLAKRLAAGLLSPESGQDRIVREYLFGRADQIVKPYNY 191
             Y+VPYVGL GY G+NP L   ++++L AGLL+ E+GQD I+R  L+ RA   V+PY  
Sbjct: 157 ACYVVPYVGLTGYVGANPKLESPVSRKLVAGLLAVEAGQDAIIRALLYERATDKVEPYGI 216

Query: 192 TVARMK------------------GFLSLRSLELNRRLVAMSRPWAFNSFSYPRSPEEIL 233
           TVA                     G +    L    ++         NS ++PR+PE  L
Sbjct: 217 TVAEFTNKISELRNKLGDKGVKDLGLIVEPELGAEGKISGNVLAGDKNSLAFPRTPERCL 276

Query: 234 RISYGTGNEHVPGRFFPQGGKWKN 257
                      P  F P+    K+
Sbjct: 277 GSCTAAAMRPSPAAFIPKAPTGKS 300


>sp|P53693|RDS1_SCHPO Protein rds1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=rds1 PE=2 SV=2
          Length = 402

 Score = 33.9 bits (76), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 9/86 (10%)

Query: 42  PLCRDDVDNLQFAQSLEHLEAELFLGGGLGYGLDKV--APYLKANLDNLTRAIITEFGYQ 99
           P    D  +L  A   E++E +LF      YGL K   A + +A +D   R +I     Q
Sbjct: 73  PFSDFDYQSLSLALYHEYIEYDLF-----NYGLTKFSDAEFDEAGIDAEYRHLIRFMAQQ 127

Query: 100 EVGHLRCGHALL--QCHKVCASSRNF 123
           E+GH+     +L     K C+   NF
Sbjct: 128 EIGHIELVTNMLGPNAPKACSYQYNF 153


>sp|P35834|CSF3_CANFA Granulocyte colony-stimulating factor OS=Canis familiaris GN=CSF3
           PE=1 SV=1
          Length = 175

 Score = 32.3 bits (72), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 24/51 (47%)

Query: 38  LPEPPLCRDDVDNLQFAQSLEHLEAELFLGGGLGYGLDKVAPYLKANLDNL 88
           +P+PPL       LQ    L  L + LFL  GL   L  ++P L   LD L
Sbjct: 57  IPQPPLSSCSSQALQLMGCLRQLHSGLFLYQGLLQALAGISPELAPTLDTL 107


>sp|A7ZER3|LGT_CAMC1 Prolipoprotein diacylglyceryl transferase OS=Campylobacter concisus
           (strain 13826) GN=lgt PE=3 SV=1
          Length = 271

 Score = 31.6 bits (70), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%)

Query: 185 IVKPYNYTVARMKGFLSLRSLELNRRLVAMSRPWAFNSFSYPRSPEEI 232
           I  P+ YT  R+  FL+    EL  R+  +  PWA N F  PR P ++
Sbjct: 142 ICIPFGYTFGRIGNFLNQ---ELFGRVTDV--PWAINVFGQPRHPSQL 184


>sp|Q5FU70|AMPA_GLUOX Probable cytosol aminopeptidase OS=Gluconobacter oxydans (strain
           621H) GN=pepA PE=3 SV=1
          Length = 490

 Score = 31.6 bits (70), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 55  QSLEHL----EAELFLGGGLGYGLDKVAPYLKANLDNLTRAIITEFGYQEVGHLRCGHAL 110
           Q++E L    E  L L   L Y   + +P L  NL  LT AI+   GY+  G      AL
Sbjct: 329 QTIEVLNTDAEGRLVLADVLSYTRKRFSPKLMVNLATLTGAIVVSLGYENAGLFSNSDAL 388

Query: 111 LQ 112
            +
Sbjct: 389 AK 390


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.140    0.440 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,130,985
Number of Sequences: 539616
Number of extensions: 4541268
Number of successful extensions: 9398
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 9391
Number of HSP's gapped (non-prelim): 10
length of query: 276
length of database: 191,569,459
effective HSP length: 116
effective length of query: 160
effective length of database: 128,974,003
effective search space: 20635840480
effective search space used: 20635840480
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)