BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044498
(366 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A3C4S4|GME1_ORYSJ GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica
GN=GME-1 PE=1 SV=1
Length = 378
Score = 574 bits (1479), Expect = e-163, Method: Compositional matrix adjust.
Identities = 289/383 (75%), Positives = 315/383 (82%), Gaps = 30/383 (7%)
Query: 2 GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
GT+YGE TY +LERE +WPS KLRIS G GGFI S+IARRLKSE HY IIA
Sbjct: 8 GTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHY---------IIA 58
Query: 62 SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
SDW KNEHM EDMFCHEFHLVDLRVMDNCL++T+GVD++ NLAADMGGMGFIQSNHSVIM
Sbjct: 59 SDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNGVDHVFNLAADMGGMGFIQSNHSVIM 118
Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYG 179
Y NT ISF+MLEAAR+NGV FF+ SSACIYPEFKQL+T+V KES+AWPAEPQDAYG
Sbjct: 119 YNNTMISFNMLEAARINGVKR--FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 176
Query: 180 LEKLATEGLCKHYTKDFEIECRLVG----------------EKAPAAFSRKAVTSTDNFE 223
LEKLATE LCKHYTKDF IECR VG EKAPAAF RKA TSTD FE
Sbjct: 177 LEKLATEELCKHYTKDFGIECR-VGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFE 235
Query: 224 MWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPI 283
MWGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEIILSFE+ +LPI
Sbjct: 236 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPI 295
Query: 284 HPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYG 343
H IPGPEGVRGRNSD+TLI E+LGWAPTMK KD LR TYFWIKEQ+EKEK QG+D++ YG
Sbjct: 296 HHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAGYG 355
Query: 344 SSNVVATQAPVQLGSPCAEDDKE 366
SS VV+TQAPVQLGS A D KE
Sbjct: 356 SSKVVSTQAPVQLGSLRAADGKE 378
>sp|A2Z7B3|GME1_ORYSI GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica
GN=OsI_032456 PE=2 SV=1
Length = 378
Score = 572 bits (1473), Expect = e-162, Method: Compositional matrix adjust.
Identities = 288/383 (75%), Positives = 314/383 (81%), Gaps = 30/383 (7%)
Query: 2 GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
GT+YGE TY +LERE +WPS KLRIS G GGFI S+IARRLKSE HY IIA
Sbjct: 8 GTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHY---------IIA 58
Query: 62 SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
SDW KNEHM EDMFCHEFHLVDLRVMDNCL++T+ VD++ NLAADMGGMGFIQSNHSVIM
Sbjct: 59 SDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNSVDHVFNLAADMGGMGFIQSNHSVIM 118
Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYG 179
Y NT ISF+MLEAAR+NGV FF+ SSACIYPEFKQL+T+V KES+AWPAEPQDAYG
Sbjct: 119 YNNTMISFNMLEAARINGVKR--FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 176
Query: 180 LEKLATEGLCKHYTKDFEIECRLVG----------------EKAPAAFSRKAVTSTDNFE 223
LEKLATE LCKHYTKDF IECR VG EKAPAAF RKA TSTD FE
Sbjct: 177 LEKLATEELCKHYTKDFGIECR-VGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFE 235
Query: 224 MWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPI 283
MWGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEIILSFE+ +LPI
Sbjct: 236 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPI 295
Query: 284 HPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYG 343
H IPGPEGVRGRNSD+TLI E+LGWAPTMK KD LR TYFWIKEQ+EKEK QG+D++ YG
Sbjct: 296 HHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAGYG 355
Query: 344 SSNVVATQAPVQLGSPCAEDDKE 366
SS VV+TQAPVQLGS A D KE
Sbjct: 356 SSKVVSTQAPVQLGSLRAADGKE 378
>sp|Q2R1V8|GME2_ORYSJ GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica
GN=GME-2 PE=2 SV=2
Length = 371
Score = 566 bits (1459), Expect = e-161, Method: Compositional matrix adjust.
Identities = 286/378 (75%), Positives = 311/378 (82%), Gaps = 30/378 (7%)
Query: 7 ECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNK 66
E TY +LE+E +WP KLRIS G GGFI S+IARRLKSE HY IIASDW K
Sbjct: 6 EYTYVELEKEPYWPFEKLRISITGAGGFIASHIARRLKSEGHY---------IIASDWKK 56
Query: 67 NEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTT 126
NEHM EDMFCHEFHLVDLRVMDNCL++T+GVD++ NLAADMGGMGFIQSNHSVIMY NT
Sbjct: 57 NEHMTEDMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM 116
Query: 127 ISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDV--KESEAWPAEPQDAYGLEKLA 184
ISF+MLEAAR+NGV FF+ SSACIYPEFKQLDT V KES+AWPAEPQDAYGLEKLA
Sbjct: 117 ISFNMLEAARINGVKR--FFYASSACIYPEFKQLDTVVSLKESDAWPAEPQDAYGLEKLA 174
Query: 185 TEGLCKHYTKDFEIECRLVG----------------EKAPAAFSRKAVTSTDNFEMWGDG 228
TE LCKHYTKDF IECR VG EKAPAAF RKA+TSTD FEMWGDG
Sbjct: 175 TEELCKHYTKDFGIECR-VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDRFEMWGDG 233
Query: 229 KQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG 288
QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAEI+LSFEN++LPIH IPG
Sbjct: 234 LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPG 293
Query: 289 PEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYGSSNVV 348
PEGVRGRNSD+TLI E+LGWAPTM+ KD LRITYFWIKEQ+EKEKA+G+DLS YGSS VV
Sbjct: 294 PEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKAEGVDLSAYGSSKVV 353
Query: 349 ATQAPVQLGSPCAEDDKE 366
TQAPVQLGS A D KE
Sbjct: 354 QTQAPVQLGSLRAADGKE 371
>sp|Q93VR3|GME_ARATH GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GN=At5g28840 PE=1
SV=1
Length = 377
Score = 550 bits (1417), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/383 (71%), Positives = 305/383 (79%), Gaps = 29/383 (7%)
Query: 2 GTSYGECTYDKLERESHWPSGKLRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIA 61
GT YG TY +LERE +WPS L+IS G GGFI S+IARRLK E HY +IA
Sbjct: 6 GTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHY---------VIA 56
Query: 62 SDWNKNEHMMEDMFCHEFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIM 121
SDW KNEHM EDMFC EFHLVDLRVM+NCL++T GVD++ NLAADMGGMGFIQSNHSVIM
Sbjct: 57 SDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIM 116
Query: 122 YKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDT---DVKESEAWPAEPQDAY 178
Y NT ISF+M+EAAR+NG+ FF+ SSACIYPEFKQL+T +KES+AWPAEPQDAY
Sbjct: 117 YNNTMISFNMIEAARINGIKR--FFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAY 174
Query: 179 GLEKLATEGLCKHYTKDFEIECRLVG---------------EKAPAAFSRKAVTSTDNFE 223
GLEKLATE LCKHY KDF IECR+ EKAPAAF RKA TSTD FE
Sbjct: 175 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFE 234
Query: 224 MWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPI 283
MWGDG QTRS TFIDECVEGVLRL KSDFREP+NIGSDEMVS+NEMAE++LSFE +KLPI
Sbjct: 235 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPI 294
Query: 284 HPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKEKAQGIDLSIYG 343
H IPGPEGVRGRNSD+ LI E+LGWAP M+ K+ LRITYFWIKEQ+EKEKA+G D+S+YG
Sbjct: 295 HHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYG 354
Query: 344 SSNVVATQAPVQLGSPCAEDDKE 366
SS VV TQAPVQLGS A D KE
Sbjct: 355 SSKVVGTQAPVQLGSLRAADGKE 377
>sp|Q67WR5|FCL2_ORYSJ Putative GDP-L-fucose synthase 2 OS=Oryza sativa subsp. japonica
GN=Os06g0652300 PE=3 SV=1
Length = 347
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 25/248 (10%)
Query: 104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYP-EFKQLDT 162
AA +GG+ + + + +N I+ ++++AAR G + ++S+ IYP + Q
Sbjct: 94 AAKVGGVHASSAAPAEYLTENLRITVNVVDAARRCGSVR-KLLVLASSTIYPADAPQPTP 152
Query: 163 DVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC------RLVGEKAP-------- 208
+ PAE + Y + K+A +C+ ++ ++ L G + P
Sbjct: 153 ESALLTGPPAEGSEWYAIPKIAGIKMCQAVRAEYGLDAIAAAPNNLYGPRHPFPPEHSHV 212
Query: 209 -----AAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI-KSDFREPLNIGSDE 262
F R + +WG G R T +D+ E V+ L+ + E +N+GS E
Sbjct: 213 IPALIRRFHRAKLEGAGEVAVWGSGAAAREFTHVDDLAEAVVVLMERYSGEEHVNVGSGE 272
Query: 263 MVSINEMAEIILSFEN-EKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRIT 321
V++ E+AE + E + PEGV R D + +LGW P + +D ++
Sbjct: 273 EVTVRELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRMR-KLGWEPRVALRDGIQDL 331
Query: 322 Y-FWIKEQ 328
Y F+++ +
Sbjct: 332 YRFYLRHE 339
>sp|Q9LMU0|FCL2_ARATH Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana GN=GER2
PE=2 SV=1
Length = 328
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 31/255 (12%)
Query: 104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTD 163
AA +GG+ + + + N I +++ +A +GV L F+ S+CIYP+F
Sbjct: 79 AAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKL--LFLGSSCIYPKFAPQPIP 136
Query: 164 VKESEAWPAEPQDA-YGLEKLATEGLCKHYTKDFE------IECRLVGEK---------- 206
P EP + Y + K+A +C+ Y + + L G+
Sbjct: 137 ESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTNLYGQNDNFHPENSHV 196
Query: 207 APAA---FSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIK--SDFREPLNIGSD 261
PA F + D +WG G R +D+ + + L+ S F E +N+GS
Sbjct: 197 LPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLMDQYSGF-EHVNVGSG 255
Query: 262 EMVSINEMAEII---LSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDEL 318
V+I E+AE++ + F+ + + P+G + D + + LGW P + KD L
Sbjct: 256 VEVTIKELAELVKEVVGFKGKL--VWDTTKPDGTPRKLMDSSKL-ASLGWTPKISLKDGL 312
Query: 319 RITYFWIKEQVEKEK 333
TY W E V ++K
Sbjct: 313 SQTYEWYLENVVQKK 327
>sp|O34886|YTCB_BACSU Uncharacterized UDP-glucose epimerase YtcB OS=Bacillus subtilis
(strain 168) GN=ytcB PE=3 SV=1
Length = 316
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 93 MTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSAC 152
+ GVD + +LAA G ++ N +LEA R + + TF F S++
Sbjct: 71 LLEGVDVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHSIQ--TFVFASTSS 128
Query: 153 IYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVG-------- 204
+Y E KQ K SE P YG+ KL E LC Y + F I ++
Sbjct: 129 VYGE-KQ----GKVSENTSLSPLSPYGVTKLTGEKLCHVYKQSFGIPIVILRFFTVYGPR 183
Query: 205 EKAPAAFSR--KAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD--FREPLNIGS 260
++ AF R K ++GDG+Q+R T+I +CV+G+ ++ E +NIG
Sbjct: 184 QRPDMAFHRLIKQHLQQKPLTIFGDGQQSRDFTYISDCVKGITAVLGKPHLIGETVNIGG 243
Query: 261 DEMVSINEMAEIILSFENEKLPIH 284
E S+ ++ +I K +H
Sbjct: 244 AERASVLKVVSLIEDISGRKATLH 267
>sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2
SV=2
Length = 418
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 136/325 (41%), Gaps = 33/325 (10%)
Query: 25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHE-FHLVD 83
RI G GF+ S++ +L + H T + N + + +E HE F L++
Sbjct: 88 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNF-------FTGRKRNVEHWIGHENFELIN 140
Query: 84 LRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
V++ + VD + +LA+ ++ N + NT + +ML A+ G
Sbjct: 141 HDVVEP---LYIEVDQIYHLASPASPPNYM-YNPIKTLKTNTIGTLNMLGLAKRVGA--- 193
Query: 144 TFFFVSSACIY--PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECR 201
S++ +Y PE + D P P+ Y K E +C Y K +E R
Sbjct: 194 RLLLASTSEVYGDPEVHPQNEDY-WGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 252
Query: 202 LV-------------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI 248
+ + + F +A+ + ++G G QTR+ ++ + V G++ L+
Sbjct: 253 VARIFNTFGSRMHMNDGRVVSNFILQALQG-EALTVYGSGSQTRAFQYVSDLVNGLVSLM 311
Query: 249 KSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP-GPEGVRGRNSDDTLINEELG 307
S+ P+N+G+ E +I E A++I S + I +P + + R D LG
Sbjct: 312 NSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLG 371
Query: 308 WAPTMKQKDELRITYFWIKEQVEKE 332
W P + ++ L T + ++E +
Sbjct: 372 WEPVVPLEEGLNKTIQYFSRELEHQ 396
>sp|Q67WR2|FCL1_ORYSJ Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica
GN=Os06g0652400 PE=2 SV=1
Length = 328
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 28/254 (11%)
Query: 104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTD 163
AA +GG+ + + + N I ++++AA G + F+ S+CIYP+F
Sbjct: 78 AAKVGGIHANSTFPADFIAANLQIQTNVVDAALKCGSVR-KLLFLGSSCIYPKFAPQPIP 136
Query: 164 VKESEAWPAEPQDA-YGLEKLATEGLCKHY-------------------TKDFEIECRLV 203
+ P EP + Y + K+A +C+ Y +F E V
Sbjct: 137 ENSLLSGPLEPTNEWYAVAKIAGIKMCQAYRIQHGFDAISAMPTNLYGPQDNFHPENSHV 196
Query: 204 GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKS-DFREPLNIGSDE 262
F ++ +WG G R +D+ + V+ L+ E +N+GS
Sbjct: 197 LPALIRRFHEAKASNAAEVVVWGTGSPLREFLHVDDLADAVIFLMDHYSGLEHVNVGSGS 256
Query: 263 MVSINEMAEII---LSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELR 319
V+I E+AE++ + F+ + + P+G + D + I +E+GW P + K+ L
Sbjct: 257 EVTIKELAELVKEVVGFQGKL--VWDSSKPDGTPRKLMDSSKI-QEMGWKPKVPLKEGLV 313
Query: 320 ITYFWIKEQVEKEK 333
TY W E V K
Sbjct: 314 ETYKWYVENVISAK 327
>sp|P55353|Y4AF_RHISN Uncharacterized protein y4aF OS=Rhizobium sp. (strain NGR234)
GN=NGR_a00420 PE=3 SV=1
Length = 314
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 27/230 (11%)
Query: 104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTD 163
AA +GG+ + + +Y+N + +++E + +GV L F+ S+CIYP++
Sbjct: 67 AAKVGGILANDTMPADFIYQNLIMEANVIEGSFRSGVEKL--LFLGSSCIYPKYAAQPIR 124
Query: 164 VKESEAWPAEPQDA-YGLEKLATEGLCKHYTKDF------EIECRLVGEK---------A 207
+ P EP + Y + K+A LC+ Y K + + L G +
Sbjct: 125 EEALLTGPLEPTNEWYAIAKIAGIKLCQAYRKQYGANFISAMPTNLYGPRDKFDLNSSHV 184
Query: 208 PAAFSRKA----VTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLIKS-DFREPLNIGSDE 262
A RKA + +WG G TR + ++C + ++ L+K E +NIGS
Sbjct: 185 VPALIRKAHEAKIKDLGCLSIWGSGTPTRDFLYSEDCSDALVFLLKHYSETEHINIGSGG 244
Query: 263 MVSINEMAEIILSFENEKLPI-HPIPGPEGV-RGRNSDDTLINEELGWAP 310
+SI E+A I+ K I P+G R S + L++ +GW P
Sbjct: 245 EISIIELAHIVCRVVGFKGDIVFDTSKPDGTPRKLLSSERLVS--MGWRP 292
>sp|O49213|FCL1_ARATH GDP-L-fucose synthase 1 OS=Arabidopsis thaliana GN=GER1 PE=1 SV=3
Length = 323
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 33/252 (13%)
Query: 104 AADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTD 163
AA +GG+ + + + N I +++ +A +GV L F+ S+CIYP+F
Sbjct: 76 AAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKL--LFLGSSCIYPKFA--PQP 131
Query: 164 VKESEAWPA--EPQDA-YGLEKLATEGLCKHY-------------------TKDFEIECR 201
+ ES A EP + Y + K+A C+ Y +F E
Sbjct: 132 IPESALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAISGMPTNLYGPNDNFHPENS 191
Query: 202 LVGEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI-KSDFREPLNIGS 260
V F V + +WG G R +D+ + + L+ + E +NIGS
Sbjct: 192 HVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLDRYSGLEHVNIGS 251
Query: 261 DEMVSINEMAEII---LSFENEKLPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDE 317
+ V+I E+AE++ + FE KL P+G + D + + LGW P + +D
Sbjct: 252 GQEVTIRELAELVKEVVGFEG-KLGWD-CTKPDGTPRKLMDSSKL-ASLGWTPKVSLRDG 308
Query: 318 LRITYFWIKEQV 329
L TY W + V
Sbjct: 309 LSQTYDWYLKNV 320
>sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1
PE=2 SV=1
Length = 421
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 139/337 (41%), Gaps = 57/337 (16%)
Query: 25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHE-FHLVD 83
RI G GF+ S++ +L + H T + N + + +E HE F L++
Sbjct: 91 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNF-------FTGRKRNVEHWIGHENFELIN 143
Query: 84 LRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
V++ + VD + +LA+ ++ N + NT + +ML A+ G
Sbjct: 144 HDVVEP---LYIEVDQIYHLASPASPPNYM-YNPIKTLKTNTIGTLNMLGLAKRVGA--- 196
Query: 144 TFFFVSSACIY--PEFKQLDTDVKESEAW----PAEPQDAYGLEKLATEGLCKHYTKDFE 197
S++ +Y PE + E W P P+ Y K E +C Y K
Sbjct: 197 RLLLASTSEVYGDPE-----VHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEG 251
Query: 198 IECRLV-------------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGV 244
+E R+ + + F +A+ + ++G G+QTR+ ++ + V G+
Sbjct: 252 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQG-EQLTVYGSGEQTRAFQYVSDLVNGL 310
Query: 245 LRLIKSDFREPLNIGSDEMVSINEMAEII---------LSFENEKLPIHPIPGPEGVRGR 295
+ L+ S+ P+N+G+ + SI + A +I +SF +E + + R
Sbjct: 311 VALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSE--------AQDDPQRR 362
Query: 296 NSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEKE 332
D LGW P + ++ L T + ++++E +
Sbjct: 363 KPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKELEHQ 399
>sp|P32055|FCL_ECOLI GDP-L-fucose synthase OS=Escherichia coli (strain K12) GN=fcl PE=1
SV=2
Length = 321
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 113/285 (39%), Gaps = 35/285 (12%)
Query: 78 EFHLVDLRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARM 137
E +L+D R + + + +D + AA +GG+ + + +Y+N I +++ AA
Sbjct: 38 ELNLLDSRAVHDFF-ASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQ 96
Query: 138 NGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP-QDAYGLEKLATEGLCKHYTKDF 196
N V L F+ S+CIYP+ + E EP + Y + K+A LC+ Y + +
Sbjct: 97 NDVNKL--LFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY 154
Query: 197 EIECRLV----------------GEKAPAAFSRKAVTSTDN---FEMWGDGKQTRSLTFI 237
+ R V PA R + N +WG G R +
Sbjct: 155 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHV 214
Query: 238 DECVEGVLRLIK----------SDFREPLNIGSDEMVSINEMAEIILSFENEK-LPIHPI 286
D+ + +++ +N+G+ +I E+A+ I K +
Sbjct: 215 DDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDA 274
Query: 287 PGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIKEQVEK 331
P+G + D T ++ +LGW + + L TY W E ++
Sbjct: 275 SKPDGTPRKLLDVTRLH-QLGWYHEISLEAGLASTYQWFLENQDR 318
>sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1
PE=1 SV=1
Length = 420
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 133/323 (41%), Gaps = 33/323 (10%)
Query: 25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHE-FHLVD 83
RI G GF+ S++ +L + H T + N + + +E HE F L++
Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNF-------FTGRKRNVEHWIGHENFELIN 142
Query: 84 LRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
V++ + VD + +LA+ ++ N + NT + +ML A+ G
Sbjct: 143 HDVVEP---LYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA--- 195
Query: 144 TFFFVSSACIY--PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECR 201
S++ +Y PE D P P+ Y K E +C Y K +E R
Sbjct: 196 RLLLASTSEVYGDPEVHPQSEDY-WGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 254
Query: 202 LV-------------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI 248
+ + + F +A+ + ++G G QTR+ ++ + V G++ L+
Sbjct: 255 VARIFNTFGPRMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALM 313
Query: 249 KSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP-GPEGVRGRNSDDTLINEELG 307
S+ P+N+G+ E +I E A++I + I + + + R D LG
Sbjct: 314 NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 308 WAPTMKQKDELRITYFWIKEQVE 330
W P + ++ L + ++++E
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELE 396
>sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2
SV=1
Length = 420
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 133/323 (41%), Gaps = 33/323 (10%)
Query: 25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHE-FHLVD 83
RI G GF+ S++ +L + H T + N + + +E HE F L++
Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNF-------FTGRKRNVEHWIGHENFELIN 142
Query: 84 LRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
V++ + VD + +LA+ ++ N + NT + +ML A+ G
Sbjct: 143 HDVVEP---LYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA--- 195
Query: 144 TFFFVSSACIY--PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECR 201
S++ +Y PE D P P+ Y K E +C Y K +E R
Sbjct: 196 RLLLASTSEVYGDPEVHPQSEDY-WGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 254
Query: 202 LV-------------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI 248
+ + + F +A+ + ++G G QTR+ ++ + V G++ L+
Sbjct: 255 VARIFNTFGPRMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALM 313
Query: 249 KSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP-GPEGVRGRNSDDTLINEELG 307
S+ P+N+G+ E +I E A++I + I + + + R D LG
Sbjct: 314 NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 308 WAPTMKQKDELRITYFWIKEQVE 330
W P + ++ L + ++++E
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELE 396
>sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1
SV=1
Length = 420
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 133/323 (41%), Gaps = 33/323 (10%)
Query: 25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHE-FHLVD 83
RI G GF+ S++ +L + H T + N + + +E HE F L++
Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNF-------FTGRKRNVEHWIGHENFELIN 142
Query: 84 LRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
V++ + VD + +LA+ ++ N + NT + +ML A+ G
Sbjct: 143 HDVVEP---LYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA--- 195
Query: 144 TFFFVSSACIY--PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECR 201
S++ +Y PE D P P+ Y K E +C Y K +E R
Sbjct: 196 RLLLASTSEVYGDPEVHPQSEDY-WGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 254
Query: 202 LV-------------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI 248
+ + + F +A+ + ++G G QTR+ ++ + V G++ L+
Sbjct: 255 VARIFNTFGPRMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALM 313
Query: 249 KSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP-GPEGVRGRNSDDTLINEELG 307
S+ P+N+G+ E +I E A++I + I + + + R D LG
Sbjct: 314 NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 308 WAPTMKQKDELRITYFWIKEQVE 330
W P + ++ L + ++++E
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELE 396
>sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2
SV=1
Length = 420
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 133/323 (41%), Gaps = 33/323 (10%)
Query: 25 RISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHE-FHLVD 83
RI G GF+ S++ +L + H T + N + + +E HE F L++
Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNF-------FTGRKRNVEHWIGHENFELIN 142
Query: 84 LRVMDNCLRMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSL 143
V++ + VD + +LA+ ++ N + NT + +ML A+ G
Sbjct: 143 HDVVEP---LYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA--- 195
Query: 144 TFFFVSSACIY--PEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECR 201
S++ +Y PE D P P+ Y K E +C Y K +E R
Sbjct: 196 RLLLASTSEVYGDPEVHPQSEDY-WGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 254
Query: 202 LV-------------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRLI 248
+ + + F +A+ + ++G G QTR+ ++ + V G++ L+
Sbjct: 255 VARIFNTFGPRMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALM 313
Query: 249 KSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIP-GPEGVRGRNSDDTLINEELG 307
S+ P+N+G+ E +I E A++I + I + + + R D LG
Sbjct: 314 NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 373
Query: 308 WAPTMKQKDELRITYFWIKEQVE 330
W P + ++ L + ++++E
Sbjct: 374 WEPVVPLEEGLNKAIHYFRKELE 396
>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0211 PE=3 SV=1
Length = 305
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 88/219 (40%), Gaps = 25/219 (11%)
Query: 124 NTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKL 183
N + ++LE R + + F S +Y E L D E P P YGL K
Sbjct: 91 NVLGTINILEMMRKYDIDKIVFA-SSGGAVYGEPNYLPVD----ENHPINPLSPYGLSKY 145
Query: 184 ATEGLCKHYTKDFEIECRLV-------------GEKAPAAFSRKAVTSTDNFEMWGDGKQ 230
E K Y + + IE ++ GE + + + ++GDG Q
Sbjct: 146 VGEEYIKLYNRLYGIEYAILRYSNVYGERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQ 205
Query: 231 TRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEII---LSFENEKLPIHPIP 287
TR ++ + + L + E +NIG+ + S+NE+ +II + F E + P
Sbjct: 206 TRDFVYVGDVAKANLMALNWK-NEIVNIGTGKETSVNELFDIIKHEIGFRGEAIYDKP-- 262
Query: 288 GPEGVRGRNSDDTLINEELGWAPTMKQKDELRITYFWIK 326
EG R D E LGW P + K+ ++ W+K
Sbjct: 263 -REGEVYRIYLDIKKAESLGWKPEIDLKEGIKRVVNWMK 300
>sp|Q331Q7|GERKI_STRSQ dTDP-4-dehydro-6-deoxyglucose reductase OS=Streptomyces sp.
GN=gerKI PE=1 SV=1
Length = 326
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 220 DNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSF--E 277
+ E+WGDG QTRS + + V LRL+++ +N+ E VSI E+A ++++
Sbjct: 216 EEIEIWGDGSQTRSFVHVADLVRASLRLLETGKYPEMNVAGAEQVSILELAGMVMAVLGR 275
Query: 278 NEKLPIHPIPGPEGVRGRNSDDTLINEELGWAP 310
E++ + P P G R D + ++E + + P
Sbjct: 276 PERIRLDP-SRPVGAPSRLLDLSRMSEVIDFDP 307
>sp|P29782|RMLB_STRGR dTDP-glucose 4,6-dehydratase OS=Streptomyces griseus GN=strE PE=1
SV=1
Length = 328
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 99/251 (39%), Gaps = 22/251 (8%)
Query: 92 RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFFFVSSA 151
R+ +G D + +LAA+ + + SV + N + +L+AA +GV S F VS+
Sbjct: 71 RVMAGQDQVVHLAAE-SHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVAS--FVQVSTD 127
Query: 152 CIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATE--GLCKHYTKDFEIEC-RLVGEKAP 208
+Y + +E P P Y K + + L H + ++ R P
Sbjct: 128 EVYGSLEH----GSWTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSNNYGP 183
Query: 209 AAFSRKAVT-------STDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFR--EPLNIG 259
F K + ++GDG R +D+ V G+ +++ R NIG
Sbjct: 184 RQFPEKLIPRFITLLMDGHRVPLYGDGLNVREWLHVDDHVRGI-EAVRTRGRAGRVYNIG 242
Query: 260 SDEMVSINEMAEIILSFENEKL-PIHPIPGPEGVRGRNS-DDTLINEELGWAPTMKQKDE 317
+S E+ ++L + + +G R + D T I ELG+AP + D
Sbjct: 243 GGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPAVDLADG 302
Query: 318 LRITYFWIKEQ 328
L T W +
Sbjct: 303 LAATVAWYHKH 313
>sp|Q58455|Y1055_METJA Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1055 PE=3 SV=1
Length = 326
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 223 EMWGDGKQTRSLTFIDECVEGVLRLIKSDF-REPLNIGSDEMVSINEMAEIILSFENEKL 281
E++ G R T+I + V+G+LR IK DF E N+G+ + V + E+I + N+K
Sbjct: 212 EVYNYGNMERDFTYISDVVDGILRAIKKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKA 271
Query: 282 PIHPIPGPEGVRGRNSDDTLINEE-LGWAPTMKQKDELRITYFWIKEQ 328
+P +G R D +E+ LG+ P + ++ L+ W E
Sbjct: 272 KKKFLPMQDGDVLRTYADLSKSEKLLGYKPKVTIEEGLKRFCNWFLEN 319
>sp|P95780|RMLB_STRMU dTDP-glucose 4,6-dehydratase OS=Streptococcus mutans serotype c
(strain ATCC 700610 / UA159) GN=rmlB PE=1 SV=2
Length = 348
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 133/339 (39%), Gaps = 50/339 (14%)
Query: 30 GVGGFIPSNIARRLKSERHYSTSIPNALYIIASD---WNKNEHMMEDMFCHEFHLVDLRV 86
G GFI SN HY + +++ D + N +E++ LV +
Sbjct: 11 GGAGFIGSNFV-------HYVYNNHPDVHVTVLDKLTYAGNRANLEEILGDRVELVVGDI 63
Query: 87 MDNCL--RMTSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLT 144
D+ L ++ + D + + AA+ ++ + S +Y N ++ +LEAAR +
Sbjct: 64 ADSELVDKLAAKADAIVHYAAESHNDNSLK-DPSPFIYTNFVGTYILLEAARK---YDIR 119
Query: 145 FFFVSSACIYPEFKQLDTDVKESEAWPAE---------PQDAYGLEKLATEGLCKHYTKD 195
F VS+ +Y + L D+ P E P Y K A++ + K + +
Sbjct: 120 FHHVSTDEVYGDL-PLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRS 178
Query: 196 FEIECRLVG---EKAPAAFSRK-------AVTSTDNFEMWGDGKQTRSLTFIDECVEGVL 245
F ++ + P K + S +++G+GK R ++ GV
Sbjct: 179 FGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHSTGVW 238
Query: 246 RLI-KSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNS------- 297
++ K E IG+D + E+ E+IL EK+ P + V R
Sbjct: 239 AILTKGRIGETYLIGADGEKNNKEVLELIL----EKMS-QPKNAYDHVTDRAGHDLRYAI 293
Query: 298 DDTLINEELGWAPTMKQKDE-LRITYFWIKEQVEKEKAQ 335
D T + EELGW P +E L T W E + KA+
Sbjct: 294 DSTKLREELGWKPQFTNFEEGLEDTIKWYTEHEDWWKAE 332
>sp|P39858|CAPI_STAAU Protein CapI OS=Staphylococcus aureus GN=capI PE=3 SV=1
Length = 334
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 102/242 (42%), Gaps = 26/242 (10%)
Query: 24 LRISSIGVGGFIPSNIARRLKSERHYSTSIP--NALYIIASDWNKNEHMMEDMFCHEFHL 81
++I G GFI S++A++L + HY + N Y ++ ++ + + ++ F F+
Sbjct: 1 MKILITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKSIGKENFT--FNK 58
Query: 82 VDLRVMDNCLRMTSGVDN----MSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARM 137
V L D+ ++ VD + NLAA G+ + N + N ++LE +R
Sbjct: 59 VKLENYDDLSKVF--VDEQPEVVVNLAA-QAGVRYSIENPRTYIDSNIVGFMNILECSRH 115
Query: 138 NGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE 197
+ +L + SS+ +Y ++ P Y K + E + Y+ +
Sbjct: 116 FNIQNL--IYASSSSVYGANTSKPFSTSDN---IDHPLSLYAATKKSNELMAHTYSHLYN 170
Query: 198 IEC---RLVGEKAP------AAFS-RKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRL 247
+ R P A F KA+ + +++ G R T++D+ VE + RL
Sbjct: 171 LPTTGLRFFTVYGPWGRPDMALFKFTKAIVNDQAIDVYNHGNMMRDFTYVDDIVEAISRL 230
Query: 248 IK 249
+K
Sbjct: 231 VK 232
>sp|P37761|RMLB_NEIGO dTDP-glucose 4,6-dehydratase OS=Neisseria gonorrhoeae GN=rfbB PE=3
SV=1
Length = 346
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 83/232 (35%), Gaps = 33/232 (14%)
Query: 124 NTTISFDMLEAARM-------NGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQD 176
N +FD+LEAAR + F +S+ +Y + TD +E P P
Sbjct: 106 NIVGTFDLLEAARAYWQQMPSEKREAFRFHHISTDEVYGDLH--GTDDLFTETTPYAPSS 163
Query: 177 AYGLEKLATEGLCKHYTKDFE---IECRLVGEKAPAAFSRKAVT-------STDNFEMWG 226
Y K A + L + + + + I P F K + S ++G
Sbjct: 164 PYSASKAAADHLVRAWQRTYRLPSIVSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVYG 223
Query: 227 DGKQTRSLTFIDECVEGVLRLIKSDF-REPLNIGSDEMVSINEMAEIILSFENEKLPIHP 285
DG Q R F+++ + +++ E NIG + E+ + I + E P P
Sbjct: 224 DGAQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAPEKP 283
Query: 286 ------------IPGPEGVRGRNS-DDTLINEELGWAPTMKQKDELRITYFW 324
+ G R + D I +LGW P + LR T W
Sbjct: 284 AGVARYEDLITFVQDRPGHDARYAVDAAKIRRDLGWLPLETFESGLRKTVQW 335
>sp|Q9HTB6|RMD_PSEAE GDP-6-deoxy-D-mannose reductase OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=rmd
PE=1 SV=1
Length = 304
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 88/217 (40%), Gaps = 26/217 (11%)
Query: 124 NTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKL 183
N + ++L+A + G S TF ++SS +Y + + + E E P P++ Y + KL
Sbjct: 80 NLLGTLNLLQALKARG-FSGTFLYISSGDVYGQVAEAALPIHE-ELIP-HPRNPYAVSKL 136
Query: 184 ATEGLCKHY--TKDFEI--------------ECRLVGEKAPAAFSRKAVTSTDNFEMWGD 227
A E LC + T+ + + + ++ A K + E+ GD
Sbjct: 137 AAESLCLQWGITEGWRVLVARPFNHIGPGQKDSFVIASAARQIARMKQGLQANRLEV-GD 195
Query: 228 GKQTRSLTFIDECVEGVLRLIK-SDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPI 286
+R + + + LRL+ + N+ S + I E+ E++ +L I
Sbjct: 196 IDVSRDFLDVQDVLSAYLRLLSHGEAGAVYNVCSGQEQKIRELIELLADIAQVELEIVQD 255
Query: 287 PG----PEGVRGRNSDDTLINEELGWAPTMKQKDELR 319
P E R R S L ++ GW P + K LR
Sbjct: 256 PARMRRAEQRRVRGSHARL-HDTTGWKPEITIKQSLR 291
>sp|P44914|RMLB_HAEIN dTDP-glucose 4,6-dehydratase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=rffG PE=3 SV=1
Length = 338
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 104/291 (35%), Gaps = 67/291 (23%)
Query: 81 LVDLRVMDNCLRMTSGVDNMSNLAADM-------GGMGFIQSN---------------HS 118
+ DL V++N D + +LAA+ G F+Q+N H+
Sbjct: 60 ICDLNVIENIFEKYQP-DAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHT 118
Query: 119 VIMYKNTTISFDMLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAY 178
+ K TT F + + G +SL+ P F +E P P Y
Sbjct: 119 LDEAKKTTFRFHHISTDEVYGDLSLS---------EPAF---------TEQSPYHPSSPY 160
Query: 179 GLEKLATEGLCKHYTKDFEIECRLV-----------GEKAPAAFSRKAVTSTDNFEMWGD 227
K A+ L + + + + + + EK AV ++GD
Sbjct: 161 SASKAASNHLVQAWHRTYGLPVIITNSSNNYGAYQHAEKLIPLMISNAVMGKP-LPIYGD 219
Query: 228 GKQTRSLTFIDECVEG-VLRLIKSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHP- 285
G+Q R F+++ V+ L L K E NIG + + E+ + I E P P
Sbjct: 220 GQQIRDWLFVEDHVQASYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPN 279
Query: 286 -----------IPGPEGVRGRNSDD-TLINEELGWAPTMKQKDELRITYFW 324
+ G R S D + I+ ELGW P + + LR T W
Sbjct: 280 HIKYYEDLMTFVKDRPGHDVRYSLDCSKIHAELGWQPQITFEQGLRQTVKW 330
>sp|Q9S642|RMLB_NEIMA dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup A
/ serotype 4A (strain Z2491) GN=rfbB1 PE=3 SV=1
Length = 341
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 96/256 (37%), Gaps = 42/256 (16%)
Query: 101 SNLAADMGGMG-FIQSNHSVIMYKNTTISFDMLEAARMNGVM-------SLTFFFVSSAC 152
S++ +G G FIQ+N +F++LEAAR + F +S+
Sbjct: 85 SHVDRSIGSAGEFIQTN--------IVGTFNLLEAARAYRQQMPSEKHEAFRFHHISTDE 136
Query: 153 IYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA 209
+Y + TD +E P P Y K +++ L + + + + I P
Sbjct: 137 VYGDLS--GTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPY 194
Query: 210 AFSRKAV-----TSTDN--FEMWGDGKQTRSLTFIDECVEGVLRLIKSDF-REPLNIGSD 261
F K + + D ++GDG Q R F+++ + +++ E NIG
Sbjct: 195 HFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGH 254
Query: 262 EMVSINEMAEIILSFENEKLPIHP------------IPGPEGVRGRNSDDTL-INEELGW 308
+ E+ + I + E P P + G R + DT I +LGW
Sbjct: 255 NEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYAVDTAKIRRDLGW 314
Query: 309 APTMKQKDELRITYFW 324
P + LR T W
Sbjct: 315 QPLETFESGLRKTVQW 330
>sp|Q04871|YCL2_ECO11 Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia
coli O111:H- PE=3 SV=1
Length = 334
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 20/231 (8%)
Query: 30 GVGGFIPSNIARRLKSERHYSTSIPNA--LYIIASDWNKNEHMMEDMFCHEFHLVDLRVM 87
G GFI ++++RL H I N Y ++ + E + + F +FH +DL
Sbjct: 7 GAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPGF--QFHKIDLADR 64
Query: 88 DNCLRM-TSGVDNMSNLAADMGGMGFIQSNHSVIMYKNTTISFDMLEAARMNGVMSLTFF 146
+ + SG ++ + + N N T ++LE R N + L
Sbjct: 65 EGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILEGCRHNKIQHL--L 122
Query: 147 FVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC---RLV 203
+ SS+ +Y +++ +S P Y K A E + Y+ + + R
Sbjct: 123 YASSSSVYGLNRKMPFSTDDSVDHPVS---LYAATKKANELMAHTYSHLYGLPATGLRFF 179
Query: 204 GEKAP------AAFS-RKAVTSTDNFEMWGDGKQTRSLTFIDECVEGVLRL 247
P A F KA+ + +++ GK R T+ID+ E ++RL
Sbjct: 180 TVYGPWGRPDMALFKFTKAMLEGKSIDVYNYGKMKRDFTYIDDIAEAIIRL 230
>sp|B0RVL0|RMLB_XANCB dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv.
campestris (strain B100) GN=rfbB PE=3 SV=1
Length = 351
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 77/207 (37%), Gaps = 29/207 (14%)
Query: 142 SLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCK--HYTKDFEI- 198
+ F VS+ +Y + K +E P P Y K A++ L + H+T +
Sbjct: 125 AFRFLHVSTDEVYGTLGETG---KFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVL 181
Query: 199 ECRLVGEKAPAAFSRKAV-------TSTDNFEMWGDGKQTRSLTFIDECVEGVLR-LIKS 250
P F K + + + ++GDGKQ R F+ + E + L K
Sbjct: 182 TTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKG 241
Query: 251 DFREPLNIGSDEMVSINEMAEIILSFENEKLP-------------IHPIPGPEGVRGRNS 297
E N+G + E+ + I + ++ P + PG + R
Sbjct: 242 RVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHD--RRYAI 299
Query: 298 DDTLINEELGWAPTMKQKDELRITYFW 324
D + + +ELGW P + + +T W
Sbjct: 300 DASKLKDELGWEPAYTFEQGIALTVDW 326
>sp|O54067|LPSL_RHIME UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti (strain 1021)
GN=lspL PE=3 SV=2
Length = 341
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 93/243 (38%), Gaps = 31/243 (12%)
Query: 24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVD 83
+R G GFI ++A+RL E H+ + H + + F V
Sbjct: 1 MRYLITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQR-SNGFKAVT 59
Query: 84 LRVMDNCLRMTSGVDNMSNLA--------ADMGGMGFIQSNHSVIMYKNTTISFDMLEAA 135
+ D +D + LA A G+ + N + N S++MLE A
Sbjct: 60 AMLEDRA-----ALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGSWNMLELA 114
Query: 136 RMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPA-EPQDAYGLEKLATEGLCKHYTK 194
+ + S++ IY + + +EA A EP Y K + E + Y
Sbjct: 115 K--AIAPKHLMLASTSSIY----GANEKIPFAEADRADEPMTLYAATKKSMELMAHSYAH 168
Query: 195 DFEIEC---RLVGEKAP------AAFS-RKAVTSTDNFEMWGDGKQTRSLTFIDECVEGV 244
+++ R P A F A+ + +++G+G+ +R T+ID+ VE +
Sbjct: 169 LYKVPTTSFRFFTVYGPWGRPDMALFKFVDAIHNGRPIDIYGEGRMSRDFTYIDDLVESI 228
Query: 245 LRL 247
+RL
Sbjct: 229 VRL 231
>sp|P33217|NOLK_AZOC5 Nodulation protein NolK OS=Azorhizobium caulinodans (strain ATCC
43989 / DSM 5975 / ORS 571) GN=nolK PE=2 SV=2
Length = 312
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 38/222 (17%)
Query: 134 AARMNGVMS------LTFFFVSSACIYPEFKQLDTDVKESEAW--PAE-PQDAYGLEKLA 184
A +N VMS +T +SS+C+YP ++ +KE + P E + Y L K
Sbjct: 85 AMALNVVMSSFRSEVVTLINLSSSCMYPAC--IEGPLKECDILRGPFEVTNEGYALAKTV 142
Query: 185 TEGLCKHYTK--DFE----IECRLVG----------EKAPAAFSRKAVTS---TDNFEMW 225
+C++ K +F I C L G PA + S +++ +W
Sbjct: 143 GLKICEYIDKLPNFNYKTLIACNLYGVGDNFDPRRSHLLPAIIEKIHKASQCGSESVSIW 202
Query: 226 GDGKQTRSLTFIDECVEGVLRLIKSDFREP--LNIGSDEMVSINEMAEI---ILSFENEK 280
GDG R F + + +++ ++ P +N+G + +S+ E + ++ + E
Sbjct: 203 GDGTARREFMFAYDFAKIIIKALEVPELIPSSMNVGVGKDLSVLEYYSLVARVIGWSGEF 262
Query: 281 LPIHPIPGPEGVRGRNSDDTLINEELGWAPTMKQKDELRITY 322
++ + P G+R + D T + LGW P + +R TY
Sbjct: 263 --VYDLNRPVGMRSKLMDITHLT-ALGWVPERSLEGGIRSTY 301
>sp|A0R5C5|GALE_MYCS2 UDP-glucose 4-epimerase OS=Mycobacterium smegmatis (strain ATCC
700084 / mc(2)155) GN=MSMEG_6142 PE=1 SV=2
Length = 313
Score = 39.3 bits (90), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 125/329 (37%), Gaps = 40/329 (12%)
Query: 24 LRISSIGVGGFIPSNIARRLKSERHYSTSIPNALYIIASDWNKNEHMMEDMFCHEFHLVD 83
+R G GFI S + RL ++ H + + ++S +N H E+ EF D
Sbjct: 1 MRTLVTGAAGFIGSTLVDRLLADGHGVVGLDD----LSSGRAENLHSAENSDKFEFVKAD 56
Query: 84 LRVMD-NCLRMTSGVDNMSNLAADMGGMGFIQSNHSVI-----MYKNTTISFDMLEAARM 137
+ D L + + +LAA I SV N + + EAAR+
Sbjct: 57 IVDADLTGLLAEFKPEVIFHLAAQ------ISVKRSVDDPPFDATVNVVGTVRLAEAARL 110
Query: 138 NGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE 197
GV + S +Y T SE P P Y K+A E Y ++
Sbjct: 111 AGVRKVVHT-SSGGSVYGTPPAYPT----SEDMPVNPASPYAAGKVAGEVYLNMYRNLYD 165
Query: 198 IECRLV-------------GEKAPAAFSRKAVTSTDNFEMWGDGKQTRSLTFIDECVEGV 244
++C + GE A +A+ + +++GDG TR F+D+ V+
Sbjct: 166 LDCSHIAPANVYGPRQDPHGEAGVVAIFSEALLAGRTTKIFGDGSDTRDYVFVDDVVDAF 225
Query: 245 LRL-IKSDFREPLNIGSDEMVSINEMAEIILSFEN--EKLPIHPIPGPEGVRGRNSDDTL 301
+R + + N+G+ S E+ I ++ HP P +R D+T
Sbjct: 226 VRAGGPAGGGQRFNVGTGVETSTRELHTAIAGAVGAPDEPEFHP-PRLGDLRRSRLDNTR 284
Query: 302 INEELGWAPTMKQKDELRIT--YFWIKEQ 328
E LGW P + + + T +F K Q
Sbjct: 285 AREVLGWQPQVALAEGIAKTVEFFRNKSQ 313
>sp|Q4L3L8|Y2450_STAHJ Uncharacterized epimerase/dehydratase SH2450 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=SH2450 PE=3 SV=1
Length = 318
Score = 38.1 bits (87), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 26/125 (20%)
Query: 173 EPQDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSR---KAVTSTD-----NFEM 224
+P YG+ K+A E LC++Y F ++ R V + P S +TD FE
Sbjct: 137 QPTTMYGVNKVAGELLCQYYFTKFGVDTRSV--RFPGLISHVKEPGGGTTDYAVEIYFEA 194
Query: 225 WGDGKQTR--------SLTFIDECVEGVLRLIKSDFREPLNIGSDEMVSINEMAEIILSF 276
G+ T + ++D+ ++ +++L+++D SD++V+ N +SF
Sbjct: 195 VRKGRYTSYIAKDTYMDMMYMDDAIDAIIKLMEAD--------SDKLVTRNGYNLSAMSF 246
Query: 277 ENEKL 281
E E++
Sbjct: 247 EPEQI 251
>sp|P0C7J0|RMLB_XANCP dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=rfbB PE=3 SV=1
Length = 351
Score = 38.1 bits (87), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 76/207 (36%), Gaps = 29/207 (14%)
Query: 142 SLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCK--HYTKDFEI- 198
+ F VS+ +Y + K +E P P Y K A++ L + H+T +
Sbjct: 125 AFRFLHVSTDEVYGTLGETG---KFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVL 181
Query: 199 ECRLVGEKAPAAFSRKAV-------TSTDNFEMWGDGKQTRSLTFIDECVEGVLR-LIKS 250
P F K + + + ++GDGKQ R F+ + E + L K
Sbjct: 182 TTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKG 241
Query: 251 DFREPLNIGSDEMVSINEMAEIILSFENEKLP-------------IHPIPGPEGVRGRNS 297
E N+G + E+ + I + ++ P + PG + R
Sbjct: 242 RVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHD--RRYAI 299
Query: 298 DDTLINEELGWAPTMKQKDELRITYFW 324
D + + +ELGW P + + T W
Sbjct: 300 DASKLKDELGWEPAYTFEQGIAQTVDW 326
>sp|Q5HIC2|Y599_STAAC Uncharacterized epimerase/dehydratase SACOL0599 OS=Staphylococcus
aureus (strain COL) GN=SACOL0599 PE=3 SV=1
Length = 321
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 34/154 (22%)
Query: 123 KNTTISFDM--------LEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP 174
KN +++D+ LEAAR +L FF SS F V + +P
Sbjct: 85 KNPILAWDLNMGGLMNALEAAR---TYNLHFFTPSSIG---AFGDSTPKVNTPQVTIQQP 138
Query: 175 QDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSR-----------------KAVT 217
YG+ K+A E LC++Y K F ++ R V + P S KAV
Sbjct: 139 TTMYGVNKVAGELLCQYYFKRFGVDTRSV--RFPGLISHVKEPGGGTTDYAVEIYFKAVR 196
Query: 218 STDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD 251
++ + D + ++D+ +E +++L+++D
Sbjct: 197 E-GHYTSFIDKGTYMDMMYMDDAIEAIIKLMEAD 229
>sp|Q99W56|Y553_STAAM Uncharacterized epimerase/dehydratase SAV0553 OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=SAV0553 PE=1 SV=1
Length = 321
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 34/154 (22%)
Query: 123 KNTTISFDM--------LEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP 174
KN +++D+ LEAAR +L FF SS F V + +P
Sbjct: 85 KNPILAWDLNMGGLMNALEAAR---TYNLHFFTPSSIG---AFGDSTPKVNTPQVTIQQP 138
Query: 175 QDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSR-----------------KAVT 217
YG+ K+A E LC++Y K F ++ R V + P S KAV
Sbjct: 139 TTMYGVNKVAGELLCQYYFKRFGVDTRSV--RFPGLISHVKEPGGGTTDYAVEIYFKAVR 196
Query: 218 STDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD 251
++ + D + ++D+ +E +++L+++D
Sbjct: 197 E-GHYTSFIDKGTYMDMMYMDDAIEAIIKLMEAD 229
>sp|Q2FJ87|Y538_STAA3 Uncharacterized epimerase/dehydratase SAUSA300_0538
OS=Staphylococcus aureus (strain USA300)
GN=SAUSA300_0538 PE=3 SV=1
Length = 321
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 34/154 (22%)
Query: 123 KNTTISFDM--------LEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP 174
KN +++D+ LEAAR +L FF SS F V + +P
Sbjct: 85 KNPILAWDLNMGGLMNALEAAR---TYNLHFFTPSSIG---AFGDSTPKVNTPQVTIQQP 138
Query: 175 QDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSR-----------------KAVT 217
YG+ K+A E LC++Y K F ++ R V + P S KAV
Sbjct: 139 TTMYGVNKVAGELLCQYYFKRFGVDTRSV--RFPGLISHVKEPGGGTTDYAVEIYFKAVR 196
Query: 218 STDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD 251
++ + D + ++D+ +E +++L+++D
Sbjct: 197 E-GHYTSFIDKGTYMDMMYMDDAIEAIIKLMEAD 229
>sp|Q2G0M5|Y535_STAA8 Uncharacterized epimerase/dehydratase SAOUHSC_00535
OS=Staphylococcus aureus (strain NCTC 8325)
GN=SAOUHSC_00535 PE=3 SV=1
Length = 321
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 34/154 (22%)
Query: 123 KNTTISFDM--------LEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP 174
KN +++D+ LEAAR +L FF SS F V + +P
Sbjct: 85 KNPILAWDLNMGGLMNALEAAR---TYNLHFFTPSSIG---AFGDSTPKVNTPQVTIQQP 138
Query: 175 QDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSR-----------------KAVT 217
YG+ K+A E LC++Y K F ++ R V + P S KAV
Sbjct: 139 TTMYGVNKVAGELLCQYYFKRFGVDTRSV--RFPGLISHVKEPGGGTTDYAVEIYFKAVR 196
Query: 218 STDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD 251
++ + D + ++D+ +E +++L+++D
Sbjct: 197 E-GHYTSFIDKGTYMDMMYMDDAIEAIIKLMEAD 229
>sp|Q6GBT4|Y511_STAAS Uncharacterized epimerase/dehydratase SAS0511 OS=Staphylococcus
aureus (strain MSSA476) GN=SAS0511 PE=3 SV=1
Length = 321
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 34/154 (22%)
Query: 123 KNTTISFDM--------LEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP 174
KN +++D+ LEAAR +L FF SS F V + +P
Sbjct: 85 KNPILAWDLNMGGLMNALEAAR---TYNLHFFTPSSIG---AFGDSTPKVNTPQVTIQQP 138
Query: 175 QDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSR-----------------KAVT 217
YG+ K+A E LC++Y K F ++ R V + P S KAV
Sbjct: 139 TTMYGVNKVAGELLCQYYFKRFGVDTRSV--RFPGLISHVKEPGGGTTDYAVEIYFKAVR 196
Query: 218 STDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD 251
++ + D + ++D+ +E +++L+++D
Sbjct: 197 E-GHYTSFIDKGTYMDMMYMDDAIEAIIKLMEAD 229
>sp|Q7A788|Y511_STAAN Uncharacterized epimerase/dehydratase SA0511 OS=Staphylococcus
aureus (strain N315) GN=SA0511 PE=1 SV=1
Length = 321
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 34/154 (22%)
Query: 123 KNTTISFDM--------LEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP 174
KN +++D+ LEAAR +L FF SS F V + +P
Sbjct: 85 KNPILAWDLNMGGLMNALEAAR---TYNLHFFTPSSIG---AFGDSTPKVNTPQVTIQQP 138
Query: 175 QDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSR-----------------KAVT 217
YG+ K+A E LC++Y K F ++ R V + P S KAV
Sbjct: 139 TTMYGVNKVAGELLCQYYFKRFGVDTRSV--RFPGLISHVKEPGGGTTDYAVEIYFKAVR 196
Query: 218 STDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD 251
++ + D + ++D+ +E +++L+++D
Sbjct: 197 E-GHYTSFIDKGTYMDMMYMDDAIEAIIKLMEAD 229
>sp|Q7A1Q7|Y508_STAAW Uncharacterized epimerase/dehydratase MW0508 OS=Staphylococcus
aureus (strain MW2) GN=MW0508 PE=3 SV=1
Length = 321
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 34/154 (22%)
Query: 123 KNTTISFDM--------LEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEP 174
KN +++D+ LEAAR +L FF SS F V + +P
Sbjct: 85 KNPILAWDLNMGGLMNALEAAR---TYNLHFFTPSSIG---AFGDSTPKVNTPQVTIQQP 138
Query: 175 QDAYGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSR-----------------KAVT 217
YG+ K+A E LC++Y K F ++ R V + P S KAV
Sbjct: 139 TTMYGVNKVAGELLCQYYFKRFGVDTRSV--RFPGLISHVKEPGGGTTDYAVEIYFKAVR 196
Query: 218 STDNFEMWGDGKQTRSLTFIDECVEGVLRLIKSD 251
++ + D + ++D+ +E +++L+++D
Sbjct: 197 E-GHYTSFIDKGTYMDMMYMDDAIEAIIKLMEAD 229
>sp|O95455|TGDS_HUMAN dTDP-D-glucose 4,6-dehydratase OS=Homo sapiens GN=TGDS PE=2 SV=1
Length = 350
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 145 FFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE---IECR 201
F +VS+ +Y LD + ES P +P + Y K A E + Y + ++ + R
Sbjct: 137 FIYVSTDEVYG--GSLDKEFDESS--PKQPTNPYASSKAAAECFVQSYWEQYKFPVVITR 192
Query: 202 LVGEKAPAAFSRKAVTSTDNFE-------MWGDGKQTRSLTFIDECVEGVLRLIKSDFR- 253
P + K + + + G G QTR+ + + VE L ++K
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 254 EPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG-PEGVRGRNSDDT---LINEE---L 306
E NIG++ +S+ ++A+ ++ E + + V R ++D + +E+ L
Sbjct: 253 EIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHGL 312
Query: 307 GWAPTMKQKDELRITYFWIKEQVEKEK 333
GW P + K+ ++ T W +E K
Sbjct: 313 GWRPKVPWKEGIKKTIEWYRENFHNWK 339
>sp|P55294|RMLB_NEIMB dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=rfbB1 PE=3 SV=2
Length = 355
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 96/258 (37%), Gaps = 46/258 (17%)
Query: 101 SNLAADMGGMG-FIQSNHSVIMYKNTTISFDMLEAARMNGVM-------SLTFFFVSSAC 152
S++ +G G FIQ+N +F++LEAAR + F +S+
Sbjct: 85 SHVDRSIGSAGEFIQTN--------IVGTFNLLEAARAYWQQMPSEQHEAFRFHHISTDE 136
Query: 153 IYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDF---EIECRLVGEKAPA 209
+Y + TD +E P P Y K +++ L + + + + I P
Sbjct: 137 VYGDLG--GTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPY 194
Query: 210 AFSRKAV-----TSTDN--FEMWGDGKQTRSLTFIDECVEGVLRLIKSDF-REPLNIGSD 261
F K + + D ++GDG Q R F+++ + +++ E NIG
Sbjct: 195 HFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGH 254
Query: 262 EMVSINEMAEIILSFENEKLPIHPI---------------PGPEGVRGRNSDDTLINEEL 306
+ E+ + I + E P P PG + VR D I +L
Sbjct: 255 NEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHD-VR-YAVDAAKIRRDL 312
Query: 307 GWAPTMKQKDELRITYFW 324
GW P + LR T W
Sbjct: 313 GWLPLETFESGLRKTVQW 330
>sp|Q2YSA8|Y504_STAAB Uncharacterized epimerase/dehydratase SAB0504 OS=Staphylococcus
aureus (strain bovine RF122 / ET3-1) GN=SAB0504 PE=3
SV=1
Length = 321
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 123 KNTTISFDMLEAARMNGV-----MSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDA 177
KN +++D+ MN + +L FF SS F V + +P
Sbjct: 85 KNPILAWDLNMGGLMNALEATRTYNLHFFTPSSIG---AFGDSTPKVNTPQVTIQQPTTM 141
Query: 178 YGLEKLATEGLCKHYTKDFEIECRLVGEKAPAAFSR-----------------KAVTSTD 220
YG+ K+A E LC++Y K F ++ R V + P S KAV
Sbjct: 142 YGVNKVAGELLCQYYFKRFGVDTRSV--RFPGLISHVKEPGGGTTDYAVEIYFKAVRE-G 198
Query: 221 NFEMWGDGKQTRSLTFIDECVEGVLRLIKSD 251
++ + D + ++D+ +E +++L+++D
Sbjct: 199 HYTSFIDKGTYMDMMYMDDAIEAIIKLMEAD 229
>sp|Q0A4T8|HLDD_ALHEH ADP-L-glycero-D-manno-heptose-6-epimerase OS=Alkalilimnicola
ehrlichei (strain MLHE-1) GN=hldD PE=3 SV=1
Length = 320
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 27/174 (15%)
Query: 143 LTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIEC-- 200
+ F + SSA +Y + T+ E E P + YG KLA + + Y D +
Sbjct: 109 IPFIYASSAAVYGG-NSVFTEHPEHE----RPLNVYGYSKLAFDQYLRRYLDDLSAQVVG 163
Query: 201 -RLVGEKAPA------------AFSRK-----AVTSTDNFEMWGDGKQTRSLTFIDECVE 242
R P FSR+ V + + + DG+Q R + +CV
Sbjct: 164 LRYFNVYGPREQHKGGMASVVHHFSRQLRESGQVRLFEGSDGYADGEQRRDFVDVSDCVR 223
Query: 243 GVLRLI-KSDFREPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGR 295
L L+ + N G+ + N MA ++ + I IP PE ++GR
Sbjct: 224 LKLWLLDHPEVSGIYNCGTGRARTFNAMAHAVIDWFGHG-EIEYIPFPEHLKGR 276
>sp|Q5UR12|TGDS_MIMIV Putative dTDP-D-glucose 4,6-dehydratase OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_R141 PE=3 SV=1
Length = 323
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 24/223 (10%)
Query: 131 MLEAARMNGVMSLTFFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCK 190
+LE +RM G + L FF +S+ +Y E DT + S P P Y K E + K
Sbjct: 106 LLECSRMYGKLKL-FFHMSTDEVYGEIDTTDTSREVSLLCPTNP---YAATKAGAEHIVK 161
Query: 191 HYTKDFEI-----ECRLV--GEKAPAAFSRKAVTST---DNFEMWGDGKQTRSLTFIDEC 240
Y +++ C V + P K + S + G G R+ +
Sbjct: 162 SYFLSYKLPIIIARCNNVYGRNQYPEKLIPKFICSLLDGKKLHIQGTGNSRRNFIHAIDV 221
Query: 241 VEGVLRLIKSD-FREPLNIGSDEMVSINEMAEII-----LSFENEKLPIHPIPGPEGVRG 294
+ V +I + E NIG S+ ++A+I+ ++ EN+ L P R
Sbjct: 222 ADAVDLVINNGVIGETYNIGVTNEHSVLDVAQILCDIAGVNLENQ-LEYVPDRLFNDFRY 280
Query: 295 RNSDDTLINEELGWAPTMKQ-KDELRITYFWIKEQVEKEKAQG 336
++D + + LGW + K K EL + W K + G
Sbjct: 281 NITNDKI--KSLGWEQSRKDFKKELVELFDWYKVNRHRYNIPG 321
>sp|A6QLW2|TGDS_BOVIN dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2 SV=1
Length = 355
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 145 FFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFE---IECR 201
F +VS+ +Y LD + ES P +P + Y K A E + Y + ++ + R
Sbjct: 137 FIYVSTDEVYG--GSLDKEFDESS--PKQPTNPYASSKAAAECFVQSYWEQYKFPVVITR 192
Query: 202 LVGEKAPAAFSRKAVTSTDNFE-------MWGDGKQTRSLTFIDECVEGVLRLIKSDFR- 253
P + K + + + G G QTR+ + + VE L ++K
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 254 EPLNIGSDEMVSINEMAEIILSFENEKLPIHPIPG-PEGVRGRNSDDT---LINEE---L 306
E NIG++ +S+ ++A+ ++ E + + V R ++D + +E+ L
Sbjct: 253 EIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEKIHGL 312
Query: 307 GWAPTMKQKDELRITYFWIKEQVEKEK 333
GW P + K+ ++ T W +E K
Sbjct: 313 GWRPKVPWKEGIKKTIEWYRENFHNWK 339
>sp|P55579|Y4NG_RHISN Uncharacterized protein y4nG OS=Rhizobium sp. (strain NGR234)
GN=NGR_a02350 PE=4 SV=1
Length = 396
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 76/213 (35%), Gaps = 35/213 (16%)
Query: 145 FFFVSSACIYPEFKQLDTDVKESEAWPAEPQDAYGLEKLATEGLCKHYTKDFEIECRLVG 204
F + SS+ ++ K + +E+E PAE YG KLA E +CK + ++ +V
Sbjct: 153 FVYTSSSAVFGAPKS-NPVTEETEPNPAED---YGRAKLAGEIICKEAMQRDGLDVAIVR 208
Query: 205 EKAPAAFSRKAVTST--------DNFEMWGDGKQTRSLTFIDECVEGVLRLIKSDFREPL 256
+ + R+ V + + G G D+ +
Sbjct: 209 PRTVLGYGRQGVVQILFDWVERGLDIPVLGGGNNKYQFVHSDDLASACIAASNVKGFATY 268
Query: 257 NIGSDEMVSINEMAEIILSFENEKLPIHPIP-GPEGV----------------------R 293
NIG+ E ++ E+ ++++ I IP GP + R
Sbjct: 269 NIGAAEFGTMRELLQVVIKHAETGSRIKSIPMGPTALAANLASALGLSPLGPYHSLMYGR 328
Query: 294 GRNSDDTLINEELGWAPTMKQKDELRITYFWIK 326
D + +ELG+AP + TY W +
Sbjct: 329 AMYFDISKAQKELGYAPRYSNSQMMIETYNWYQ 361
>sp|Q59745|EXOB_RHILT UDP-glucose 4-epimerase OS=Rhizobium leguminosarum bv. trifolii
GN=exoB PE=3 SV=1
Length = 327
Score = 35.8 bits (81), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 87/249 (34%), Gaps = 60/249 (24%)
Query: 119 VIMYKNTTI-SFDMLEAARMNGVMSLTFFFVSSACIY--PEFKQLDTDVKESEAWPAEPQ 175
V Y+N I + +L AA+ G+ + F F S+ Y P+ LD ++ P
Sbjct: 89 VSFYENNVIGTLTLLSAAQAAGINA--FVFSSTCATYGLPQSVPLDETHRQV------PI 140
Query: 176 DAYGLEKLATEGLCKHYTK-----------------DFE--------IECRLVGEKAPAA 210
+ YG K E Y + DFE E + AA
Sbjct: 141 NPYGRTKYIVEQALADYDQYGSLRSVVLRYFNAAGADFEGRIGEWHQPETHAIPLAIDAA 200
Query: 211 FSRKAVTSTDNFEMWGDGKQTRS----------LTFIDECVEGVLRLIKSDFREPLNIGS 260
R+ F+++G +TR L D V V L+K LN+G+
Sbjct: 201 LGRR-----QGFKVFGSDYETRDGTCVRDYIHVLDLADAHVRAVEYLLKGGDSVALNLGT 255
Query: 261 DEMVSINEMAEIILSFENEKLPIHPIPGPEGVRGRNSDDTLINEE-----LGWAPTMKQK 315
++ E+ I N P+ I EG +S + N + LGW P
Sbjct: 256 GTGTTVKELLGAIEEVSNRPFPVEYIGRREG----DSHTLVANNDKARDVLGWVPQYDLS 311
Query: 316 DELRITYFW 324
+ +R + W
Sbjct: 312 EIIRSAWDW 320
>sp|Q7N3Q7|ARNA_PHOLL Bifunctional polymyxin resistance protein ArnA OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=arnA PE=3
SV=1
Length = 660
Score = 35.8 bits (81), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 26/128 (20%)
Query: 228 GKQTRSLTFIDECVEGVLRLIKSDFREPL------NIGS-DEMVSINEMAEIIL-SFENE 279
G+Q R T I++ +E + R+I++ RE L NIG+ SI ++AEI+L SFE+
Sbjct: 531 GEQKRCFTDINDGIEALFRIIEN--REGLCDGQIINIGNPTNEASIRQLAEILLDSFEDH 588
Query: 280 KLPIH--PIPGPEGVR-----GRNSDD------TLINEE--LGWAPTMKQKDELRITY-F 323
+L H P G + V G+ D ++ N E L W PT+ K + T F
Sbjct: 589 ELRDHFPPFAGFKKVESGSYYGKGYQDVEHRKPSIKNAERLLDWKPTIDMKQTINETLDF 648
Query: 324 WIKEQVEK 331
+++ VE+
Sbjct: 649 FLRGAVEE 656
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 137,930,598
Number of Sequences: 539616
Number of extensions: 5802886
Number of successful extensions: 13152
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 13084
Number of HSP's gapped (non-prelim): 125
length of query: 366
length of database: 191,569,459
effective HSP length: 119
effective length of query: 247
effective length of database: 127,355,155
effective search space: 31456723285
effective search space used: 31456723285
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)