Query 044500
Match_columns 86
No_of_seqs 129 out of 649
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 06:09:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044500.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044500hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m00_A Aristolochene synthase; 100.0 1.5E-32 5E-37 215.6 8.5 84 1-84 300-383 (550)
2 3g4d_A (+)-delta-cadinene synt 100.0 2.2E-32 7.7E-37 214.7 7.9 84 1-84 304-387 (554)
3 3n0f_A Isoprene synthase; terp 100.0 5.5E-32 1.9E-36 212.5 8.2 84 1-84 302-385 (555)
4 3s9v_A Abietadiene synthase, c 100.0 1.7E-30 5.6E-35 210.2 8.5 84 1-84 535-618 (785)
5 3sdr_A Alpha-bisabolene syntha 100.0 1.6E-30 5.6E-35 210.9 8.2 84 1-84 563-646 (817)
6 3p5p_A Taxadiene synthase; cla 100.0 1.9E-30 6.4E-35 209.4 7.9 84 1-84 504-587 (764)
7 2ong_A 4S-limonene synthase; m 99.9 6.4E-28 2.2E-32 188.6 8.2 84 1-84 293-376 (543)
8 2j5c_A 1,8-cineole synthase; t 99.9 7.5E-28 2.6E-32 189.2 8.3 84 1-84 320-403 (569)
9 1n1b_A (+)-bornyl diphosphate 99.9 9.2E-28 3.1E-32 188.1 8.3 84 1-84 299-382 (549)
10 3pya_A ENT-copalyl diphosphate 99.9 1.6E-24 5.5E-29 174.3 6.6 81 1-83 510-604 (727)
11 1ps1_A Pentalenene synthase; a 99.5 4.8E-15 1.6E-19 107.6 5.3 77 1-84 77-155 (337)
12 1di1_A Aristolochene synthase; 99.4 6.3E-14 2.1E-18 100.0 4.2 69 1-80 73-141 (300)
13 3bny_A Aristolochene synthase; 99.4 3.5E-13 1.2E-17 97.2 4.6 71 1-83 87-157 (320)
14 3kb9_A EPI-isozizaene synthase 99.1 3.2E-11 1.1E-15 90.0 1.4 78 2-84 118-198 (382)
15 3v1v_A 2-MIB synthase, 2-methy 92.5 0.14 4.9E-06 38.8 4.4 40 41-84 237-276 (433)
16 3fx7_A Putative uncharacterize 74.6 12 0.00042 22.9 8.4 68 9-81 4-88 (94)
17 1l1q_A Adenine phosphoribosylt 71.3 0.94 3.2E-05 29.9 0.3 20 1-20 121-140 (186)
18 1vch_A Phosphoribosyltransfera 70.1 1 3.6E-05 29.1 0.3 19 1-19 124-142 (175)
19 1nul_A XPRT, xanthine-guanine 68.6 1.7 5.7E-05 27.8 1.0 20 1-20 85-104 (152)
20 1vdm_A Purine phosphoribosyltr 68.3 1.1 3.8E-05 28.3 0.1 19 1-19 87-105 (153)
21 1y0b_A Xanthine phosphoribosyl 67.8 1.2 4.2E-05 29.4 0.3 19 1-19 124-142 (197)
22 1a3c_A PYRR, pyrimidine operon 65.4 1.5 5E-05 28.5 0.3 21 1-21 102-122 (181)
23 1g2q_A Adenine phosphoribosylt 64.4 1.6 5.4E-05 28.8 0.3 20 1-20 126-145 (187)
24 1ufr_A TT1027, PYR mRNA-bindin 64.3 1.6 5.5E-05 28.5 0.3 21 1-21 100-120 (181)
25 2dy0_A APRT, adenine phosphori 63.6 1.7 5.7E-05 28.7 0.3 20 1-20 130-149 (190)
26 1zn8_A APRT, adenine phosphori 63.3 1.7 5.8E-05 28.2 0.3 19 1-19 124-142 (180)
27 2yzk_A OPRT, oprtase, orotate 63.1 1.7 5.9E-05 28.4 0.3 19 1-19 110-128 (178)
28 2ki0_A DS119; beta-alpha-beta, 62.4 7.8 0.00027 19.3 2.6 17 9-25 10-26 (36)
29 2p1z_A Phosphoribosyltransfera 60.8 2.1 7.2E-05 28.1 0.4 20 1-20 118-137 (180)
30 1hgx_A HGXPRTASE, hypoxanthine 59.5 2 6.9E-05 28.1 0.1 19 1-19 99-117 (183)
31 1yfz_A Hypoxanthine-guanine ph 58.7 2.1 7.2E-05 28.6 0.1 24 1-27 122-145 (205)
32 2geb_A Hypoxanthine-guanine ph 58.5 2.1 7.3E-05 28.1 0.1 24 1-27 102-125 (185)
33 1lh0_A OMP synthase; loop clos 57.3 3.9 0.00013 27.6 1.2 20 1-20 121-140 (213)
34 1qb7_A APRT, adenine phosphori 56.1 2.7 9.2E-05 29.0 0.3 24 1-27 142-165 (236)
35 2aee_A OPRT, oprtase, orotate 55.8 2.7 9.4E-05 28.1 0.3 25 1-28 121-145 (211)
36 2wns_A Orotate phosphoribosylt 53.9 3.1 0.00011 27.9 0.3 24 1-27 115-138 (205)
37 1tc1_A Protein (hypoxanthine p 53.5 2.9 9.9E-05 28.6 0.1 19 1-19 107-125 (220)
38 1w30_A PYRR bifunctional prote 52.1 3.4 0.00012 27.7 0.3 21 1-21 116-136 (201)
39 2ps1_A Orotate phosphoribosylt 51.5 3.5 0.00012 28.0 0.3 20 1-20 129-148 (226)
40 1pzm_A HGPRT, hypoxanthine-gua 50.9 3.4 0.00012 27.9 0.1 24 1-27 122-145 (211)
41 1ik9_C DNA ligase IV; DNA END 50.3 8.3 0.00028 19.5 1.5 21 3-23 11-34 (37)
42 1wd5_A Hypothetical protein TT 50.1 4.3 0.00015 27.1 0.5 26 1-29 124-149 (208)
43 3o7m_A Hypoxanthine phosphorib 50.0 3.6 0.00012 27.5 0.1 25 1-28 98-122 (186)
44 1u9y_A RPPK;, ribose-phosphate 49.3 4.2 0.00014 28.9 0.4 25 1-28 209-233 (284)
45 2ywu_A Hypoxanthine-guanine ph 49.0 3.8 0.00013 27.1 0.1 25 1-28 99-123 (181)
46 3t72_q RNA polymerase sigma fa 47.9 34 0.0012 20.4 4.4 29 30-58 16-51 (99)
47 1fsg_A HGPRTASE, hypoxanthine- 47.6 4.1 0.00014 28.0 0.1 25 1-28 146-170 (233)
48 2xbu_A Hypoxanthine-guanine ph 47.4 4.5 0.00015 27.6 0.3 21 1-21 107-127 (221)
49 3ohp_A Hypoxanthine phosphorib 46.9 4.3 0.00015 26.8 0.1 25 1-28 95-119 (177)
50 3hvu_A Hypoxanthine phosphorib 46.2 4.8 0.00016 27.4 0.3 25 1-28 120-144 (204)
51 1dku_A Protein (phosphoribosyl 46.1 5.2 0.00018 28.9 0.5 24 1-27 221-244 (317)
52 3t98_B Nucleoporin NUP58/NUP45 45.1 49 0.0017 19.9 5.2 64 11-80 26-89 (93)
53 2jbh_A Phosphoribosyltransfera 44.3 5 0.00017 27.3 0.1 25 1-28 138-162 (225)
54 4dhi_B Ubiquitin thioesterase 44.2 86 0.003 22.5 8.1 43 12-54 104-148 (284)
55 1lq7_A Alpha3W; three helix bu 44.2 41 0.0014 18.8 4.8 36 43-78 5-40 (67)
56 2idx_A COB(I)yrinic acid A,C-d 43.3 9.3 0.00032 26.1 1.4 47 7-53 29-75 (196)
57 3bh4_A Alpha-amylase; calcium, 43.2 16 0.00055 27.0 2.8 19 9-27 74-92 (483)
58 1x9b_A Hypothetical membrane p 42.8 38 0.0013 18.5 3.5 28 46-73 22-51 (53)
59 2zhy_A ATP:COB(I)alamin adenos 41.6 10 0.00034 25.6 1.3 19 6-24 32-50 (183)
60 1hvx_A Alpha-amylase; hydrolas 41.0 18 0.00061 27.2 2.8 20 9-28 77-96 (515)
61 3ro3_B Minsc, peptide of prote 41.0 8.7 0.0003 17.4 0.6 8 20-27 7-14 (22)
62 2izx_A CAMP-dependent protein 41.0 34 0.0012 17.0 5.2 31 47-77 9-39 (41)
63 1o57_A PUR operon repressor; p 40.6 5.2 0.00018 28.5 -0.2 19 1-19 200-218 (291)
64 1z7g_A HGPRT, HGPRTASE, hypoxa 39.9 5.6 0.00019 26.9 -0.2 25 1-28 130-154 (217)
65 1ud2_A Amylase, alpha-amylase; 39.5 20 0.00068 26.5 2.8 20 9-28 76-95 (480)
66 1wpc_A Glucan 1,4-alpha-maltoh 39.3 20 0.00069 26.5 2.8 19 9-27 78-96 (485)
67 4gqr_A Pancreatic alpha-amylas 38.9 19 0.00064 25.9 2.5 20 9-28 72-91 (496)
68 1wy1_A Hypothetical protein PH 38.7 12 0.00042 24.9 1.4 19 6-24 27-45 (172)
69 3ci3_A Cobalamin adenosyltrans 38.3 20 0.00068 24.4 2.4 48 6-53 33-80 (194)
70 1yyq_A Trichodiene synthase; t 38.3 77 0.0026 23.3 5.8 68 2-83 98-165 (374)
71 3m3h_A OPRT, oprtase, orotate 38.0 7.7 0.00026 26.9 0.3 24 1-27 141-164 (234)
72 1ku3_A Sigma factor SIGA; heli 37.3 50 0.0017 17.8 4.1 47 29-76 6-59 (73)
73 2p7v_B Sigma-70, RNA polymeras 36.8 29 0.00099 18.5 2.6 45 30-75 2-53 (68)
74 3lrt_A Ribose-phosphate pyroph 36.7 8.2 0.00028 27.6 0.3 19 1-19 207-225 (286)
75 2nt8_A Cobalamin adenosyltrans 36.2 23 0.00078 24.7 2.5 48 6-53 62-109 (223)
76 3dez_A OPRT, oprtase, orotate 36.1 8.6 0.00029 26.9 0.3 24 1-27 153-176 (243)
77 3mjd_A Orotate phosphoribosylt 35.9 9.5 0.00033 26.4 0.5 24 1-27 140-163 (232)
78 1nog_A Conserved hypothetical 35.7 18 0.0006 24.3 1.8 19 6-24 25-43 (177)
79 1dqn_A Guanine phosphoribosylt 34.5 7.5 0.00026 26.9 -0.2 19 1-19 122-140 (230)
80 1n45_A Heme oxygenase 1, HO-1; 34.1 53 0.0018 22.3 4.1 50 6-55 166-220 (233)
81 4f9k_A CAMP-dependent protein 34.1 36 0.0012 20.8 2.9 49 29-79 35-83 (95)
82 1tty_A Sigma-A, RNA polymerase 33.8 53 0.0018 18.4 3.5 45 30-75 15-66 (87)
83 3ozf_A Hypoxanthine-guanine-xa 33.3 7.8 0.00027 27.3 -0.3 25 1-28 160-184 (250)
84 2izy_A CAMP-dependent protein 33.1 59 0.002 17.4 5.2 30 48-77 13-42 (54)
85 3dah_A Ribose-phosphate pyroph 32.9 10 0.00035 27.6 0.3 19 1-19 220-238 (319)
86 1woz_A 177AA long conserved hy 32.7 17 0.00058 24.3 1.3 18 7-24 25-42 (177)
87 3s5j_B Ribose-phosphate pyroph 31.7 11 0.00038 27.5 0.3 19 1-19 217-235 (326)
88 1ao0_A Glutamine phosphoribosy 30.8 13 0.00045 27.8 0.6 19 1-19 342-360 (459)
89 1ecf_A Glutamine phosphoribosy 30.8 13 0.00045 28.2 0.6 20 1-20 363-382 (504)
90 4aie_A Glucan 1,6-alpha-glucos 30.4 31 0.0011 25.4 2.6 21 9-29 75-95 (549)
91 1we1_A Heme oxygenase 1; oxido 29.8 74 0.0025 21.7 4.3 55 6-60 155-214 (240)
92 1nh1_A Avirulence B protein; h 29.6 54 0.0018 24.1 3.6 47 23-74 47-94 (330)
93 2kyg_A CAMP-dependent protein 28.5 69 0.0024 16.7 5.1 30 48-77 18-47 (50)
94 3bc9_A AMYB, alpha amylase, ca 28.5 36 0.0012 26.4 2.7 19 9-27 204-222 (599)
95 2ah6_A BH1595, unknown conserv 28.1 26 0.00088 24.2 1.6 19 7-25 39-57 (208)
96 3kat_A Nacht, LRR and PYD doma 28.1 42 0.0014 20.6 2.5 40 13-59 63-102 (107)
97 2q9r_A Protein of unknown func 28.1 73 0.0025 21.8 3.9 39 7-49 87-128 (200)
98 2g2d_A ATP:cobalamin adenosylt 27.7 21 0.00071 24.2 1.1 19 6-24 32-50 (193)
99 1dd4_C 50S ribosomal protein L 27.5 60 0.0021 16.6 2.7 20 12-31 14-34 (40)
100 3kkc_A TETR family transcripti 26.3 1.1E+02 0.0036 18.1 4.6 19 6-26 49-67 (177)
101 2ebi_A DNA binding protein GT- 26.1 95 0.0033 17.5 5.3 60 12-80 8-67 (86)
102 1wvt_A Hypothetical protein ST 25.7 30 0.001 23.0 1.6 43 7-53 27-69 (172)
103 1i5e_A Uracil phosphoribosyltr 25.6 18 0.00062 24.3 0.5 27 1-30 128-154 (209)
104 3fay_A P195, RAS GTPase-activa 25.6 99 0.0034 22.6 4.5 23 29-51 193-215 (387)
105 3n2l_A OPRT, oprtase, orotate 25.4 20 0.00068 25.0 0.7 24 1-27 146-169 (238)
106 1lwj_A 4-alpha-glucanotransfer 25.3 44 0.0015 24.3 2.6 22 8-29 64-85 (441)
107 1tff_A Ubiquitin thiolesterase 25.1 1.7E+02 0.0057 20.0 6.9 43 12-54 67-111 (234)
108 4i0x_A ESAT-6-like protein MAB 24.9 94 0.0032 17.7 3.6 34 18-63 44-77 (94)
109 1wer_A P120GAP; GTPase activat 24.8 91 0.0031 22.2 4.1 23 29-51 148-170 (334)
110 3pt8_A Hemoglobin II; oxygen c 24.8 68 0.0023 19.7 3.1 37 32-77 102-138 (152)
111 2ji4_A Phosphoribosyl pyrophos 24.6 18 0.0006 26.8 0.3 25 1-28 276-300 (379)
112 3n1e_A Vacuolar protein sortin 24.5 1.5E+02 0.005 19.1 5.0 33 19-52 36-68 (141)
113 1ash_A Hemoglobin (OXY); oxyge 24.5 1.3E+02 0.0045 19.2 4.5 42 33-83 104-145 (150)
114 1ygp_A Yeast glycogen phosphor 24.0 15 0.00052 30.5 -0.2 34 21-54 410-444 (879)
115 3mzy_A RNA polymerase sigma-H 23.6 1.2E+02 0.0041 17.8 5.9 28 30-58 105-136 (164)
116 1wza_A Alpha-amylase A; hydrol 23.4 53 0.0018 24.2 2.7 22 8-29 76-97 (488)
117 1rty_A YVQK protein; all alpha 23.1 26 0.00088 23.8 0.9 18 7-24 27-44 (193)
118 3ke4_A Hypothetical cytosolic 23.0 32 0.0011 23.8 1.4 19 6-24 46-64 (213)
119 2ns6_A Mobilization protein A; 22.9 72 0.0024 21.2 3.1 23 61-83 161-183 (185)
120 1g94_A Alpha-amylase; beta-alp 22.9 51 0.0017 24.1 2.5 19 9-27 60-78 (448)
121 1ht6_A AMY1, alpha-amylase iso 22.5 54 0.0018 23.6 2.6 18 8-25 63-80 (405)
122 2o8x_A Probable RNA polymerase 22.2 92 0.0032 16.0 3.7 45 30-75 12-59 (70)
123 2z1k_A (NEO)pullulanase; hydro 22.0 60 0.002 23.7 2.7 21 9-29 92-112 (475)
124 3acd_A Hypoxanthine-guanine ph 21.6 20 0.0007 23.6 0.1 26 1-29 99-124 (181)
125 2guy_A Alpha-amylase A; (beta- 21.3 59 0.002 23.8 2.6 20 9-28 93-112 (478)
126 1bin_A Leghemoglobin A; heme, 21.2 1.4E+02 0.0048 17.7 4.5 38 34-78 98-135 (143)
127 2xb0_X Chromo domain-containin 21.1 2.2E+02 0.0077 20.1 5.8 43 12-54 7-61 (270)
128 1bgf_A STAT-4; transcription f 21.1 1.6E+02 0.0055 18.4 7.2 53 4-58 20-74 (124)
129 2lv7_A Calcium-binding protein 21.1 1.2E+02 0.0039 17.4 3.5 34 12-45 31-65 (100)
130 3i5g_B Myosin regulatory light 21.1 1.4E+02 0.0046 18.2 4.0 34 12-45 11-45 (153)
131 1gcy_A Glucan 1,4-alpha-maltot 21.0 59 0.002 24.4 2.6 19 8-26 87-105 (527)
132 2aaa_A Alpha-amylase; glycosid 20.9 66 0.0023 23.6 2.8 20 9-28 93-112 (484)
133 1mxg_A Alpha amylase; hyperthe 20.8 62 0.0021 23.7 2.6 19 9-27 82-100 (435)
134 2dh2_A 4F2 cell-surface antige 20.6 60 0.002 23.7 2.5 21 9-29 77-97 (424)
135 3fav_B ESAT-6, 6 kDa early sec 20.2 1.2E+02 0.004 16.9 3.3 18 42-59 61-78 (94)
No 1
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=99.97 E-value=1.5e-32 Score=215.60 Aligned_cols=84 Identities=27% Similarity=0.458 Sum_probs=81.2
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGYF 80 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ayl 80 (86)
||+||+||+|||+|||++||+||+|||++++++||+|||+||++|+++++||++++.++||+++++|++++|+++++||+
T Consensus 300 tviDD~yD~ygTleEl~~ft~ai~RWD~~~~~~LPeymK~~f~al~~~~~E~~~~~~~~~~~~~~~ylk~~w~~l~~ayl 379 (550)
T 3m00_A 300 SIVDDTFDAYGTVKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEIVRNYN 379 (550)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHCCGGGGGGSCHHHHHHHHHHHHHHHHHHHHHHTTTCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccccCCHHHHHHHHHHHHhcCccccccCcHHHHHHHHHHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999988888999999999999999999
Q ss_pred HHHh
Q 044500 81 EFFL 84 (86)
Q Consensus 81 ~~~~ 84 (86)
+||-
T Consensus 380 ~EAk 383 (550)
T 3m00_A 380 VEST 383 (550)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9984
No 2
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=99.97 E-value=2.2e-32 Score=214.68 Aligned_cols=84 Identities=23% Similarity=0.383 Sum_probs=81.1
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGYF 80 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ayl 80 (86)
||+||+||+|||+|||++||+||+|||++++++||+|||+||++|+++++||++++.++||+++++|++++|+++++||+
T Consensus 304 tviDD~yD~ygTleEl~~ft~ai~RWD~~~~~~LPeymK~~f~al~~~~~e~~~~~~~~~~~~~~~ylk~~w~~l~~ayl 383 (554)
T 3g4d_A 304 SIVDDTYDSYATYEELIPYTNAIERWDIKCIDEIPEYMKPSYKALLDVYEEMVQLVAEHGRQYRVEYAKNAMIRLAQSYL 383 (554)
T ss_dssp HHHHHHHTSSCCHHHHHHHHHHHHHCCGGGGGGSCGGGHHHHHHHHHHHHHHHHHHGGGTCTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCHHHHHHHHHHHHhcCccccccCcHHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999988788999999999999999999
Q ss_pred HHHh
Q 044500 81 EFFL 84 (86)
Q Consensus 81 ~~~~ 84 (86)
+||-
T Consensus 384 ~EAk 387 (554)
T 3g4d_A 384 VEAK 387 (554)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9984
No 3
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=99.97 E-value=5.5e-32 Score=212.50 Aligned_cols=84 Identities=44% Similarity=0.778 Sum_probs=82.0
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGYF 80 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ayl 80 (86)
||+||+||+|||+|||++||+||+|||++++++||+|||+||++|+++++|+++++.++||+++++|++++|+++++||+
T Consensus 302 tviDD~yD~ygt~eEl~~ft~ai~RWD~~~~~~LPeymk~~~~aL~~~~~e~~~~~~~~~g~~~~~~l~~~w~~l~~ayl 381 (555)
T 3n0f_A 302 TIIDDIYDVYGTLDELELFTDAVERWDVNAINDLPDYMKLCFLALYNTINEIAYDNLKDKGENILPYLTKAWADLCNAFL 381 (555)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHTCGGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccCCHHHHHHHHHHHHhcCccccccCcHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHh
Q 044500 81 EFFL 84 (86)
Q Consensus 81 ~~~~ 84 (86)
+||-
T Consensus 382 ~EAk 385 (555)
T 3n0f_A 382 QEAK 385 (555)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9984
No 4
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=99.96 E-value=1.7e-30 Score=210.24 Aligned_cols=84 Identities=35% Similarity=0.581 Sum_probs=81.6
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGYF 80 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ayl 80 (86)
||+||+||+|||+|||++||+||+|||++++++||+|||+||++|++++|||++++.+.||+++++|++++|+++++||+
T Consensus 535 tviDD~yD~ygT~eEl~~ft~ai~RWD~~~~~~Lpeymk~~f~aL~~~~nei~~~~~~~~g~~~~~ylk~aw~~l~~ayl 614 (785)
T 3s9v_A 535 VILDDLYDAHGSLDDLKLFTESVKRWDLSLVDQMPQQMKICFVGFYNTFNDIAKEGRERQGRDVLGYIQNVWKVQLEAYT 614 (785)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHTSSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCHHHHHHHHHHHHHcCchhhhcCChhHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHh
Q 044500 81 EFFL 84 (86)
Q Consensus 81 ~~~~ 84 (86)
+||-
T Consensus 615 ~EAk 618 (785)
T 3s9v_A 615 KEAE 618 (785)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9983
No 5
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=99.96 E-value=1.6e-30 Score=210.93 Aligned_cols=84 Identities=40% Similarity=0.740 Sum_probs=81.9
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGYF 80 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ayl 80 (86)
||+||+||+|||+|||++||+||+|||++++++||+|||+||++|++++||+++++.++||+++++|++++|+++++||+
T Consensus 563 tviDD~yD~ygT~eEl~~ft~ai~RWD~~~~~~LPeymk~~~~aL~~~~~e~~~~~~~~~g~~~~~~l~~aw~~l~~ayl 642 (817)
T 3sdr_A 563 TVLDDMYDTYGTLDELKLFTEAVRRWDLSFTENLPDYMKLCYQIYYDIVHEVAWEAEKEQGRELVSFFRKGWEDYLLGYY 642 (817)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHTCGGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcccCCCHHHHHHHHHHHHHcCchhhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHh
Q 044500 81 EFFL 84 (86)
Q Consensus 81 ~~~~ 84 (86)
+||-
T Consensus 643 ~EAk 646 (817)
T 3sdr_A 643 EEAE 646 (817)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9983
No 6
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=99.96 E-value=1.9e-30 Score=209.45 Aligned_cols=84 Identities=30% Similarity=0.520 Sum_probs=81.6
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGYF 80 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ayl 80 (86)
||+||+||+|||+|||++||+||+|||++++++||+|||+||++|++++|||++++.+.||+++++|++++|+++++||+
T Consensus 504 tviDD~yD~ygT~eEl~~ft~ai~RWD~~~~~~LPeymk~~f~aL~~~~~ei~~~~~~~~g~~~~~yl~~aw~~l~~ayl 583 (764)
T 3p5p_A 504 VLFDDMADIFATLDELKSFTEGVKRWDTSLLHEIPECMQTCFKVWFKLMEEVNNDVVKVQGRDMLAHIRKPWELYFNCYV 583 (764)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHTSSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcccCCCHHHHHHHHHHHHHcCchhhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHh
Q 044500 81 EFFL 84 (86)
Q Consensus 81 ~~~~ 84 (86)
+||-
T Consensus 584 ~EAk 587 (764)
T 3p5p_A 584 QERE 587 (764)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9983
No 7
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=99.95 E-value=6.4e-28 Score=188.57 Aligned_cols=84 Identities=37% Similarity=0.704 Sum_probs=81.7
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGYF 80 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ayl 80 (86)
+++||+||+|||+||++.||+||+|||++++++||+|||+||++++++++|+++++.+.||+++++|++++|+++++||+
T Consensus 293 tviDD~fD~~gt~eEl~~ft~ai~rWD~~~~~~lPeymk~~~~aL~~~~~ei~~~~~~~~~~~~~~~l~~~w~~l~~ayl 372 (543)
T 2ong_A 293 TVIDDIYDVYGTLEELEQFTDLIRRWDINSIDQLPDYMQLCFLALNNFVDDTSYDVMKEKGVNVIPYLRQSWVDLADKYM 372 (543)
T ss_dssp HHHHHHHHSSSCHHHHHHHHHHHHTTCSSTTTTSCSHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCHHHHHHHHHHHHhcCccccccCCchhHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHh
Q 044500 81 EFFL 84 (86)
Q Consensus 81 ~~~~ 84 (86)
+||-
T Consensus 373 ~EAk 376 (543)
T 2ong_A 373 VEAR 376 (543)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9983
No 8
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=99.94 E-value=7.5e-28 Score=189.25 Aligned_cols=84 Identities=40% Similarity=0.757 Sum_probs=81.7
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGYF 80 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ayl 80 (86)
+++||+||+|||+||++.||+||+|||++++++||+|||+||++++++++|+++++.+.||+++++|++++|+++++||+
T Consensus 320 tviDD~fD~ygT~eEl~~ft~ai~rWD~~~~~~lPeymk~~~~aL~~~~~ei~~~~~~~~~~~~~~~l~~~w~~l~~ayl 399 (569)
T 2j5c_A 320 TTIDDVFDIYGTLEELQLFTTAIQRWDIESMKQLPPYMQICYLALFNFVNEMAYDTLRDKGFDSTPYLRKVWVGLIESYL 399 (569)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHTSSGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCHHHHHHHHHHHHHcCccccccCCchhHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHh
Q 044500 81 EFFL 84 (86)
Q Consensus 81 ~~~~ 84 (86)
+||-
T Consensus 400 ~EAk 403 (569)
T 2j5c_A 400 IEAK 403 (569)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9984
No 9
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=99.94 E-value=9.2e-28 Score=188.06 Aligned_cols=84 Identities=46% Similarity=0.812 Sum_probs=81.7
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGYF 80 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ayl 80 (86)
+++||+||+|||+||++.||+||+|||++++++||+|||+||++++++++|+++++.+.||+++++|++++|+++++||+
T Consensus 299 tviDD~yD~~gt~eEl~~ft~ai~rWD~~~~~~lPeymk~~~~aL~d~~~ei~~~~~~~~~~~~~~~l~~~w~~l~~ayl 378 (549)
T 1n1b_A 299 TVIDDIYDVYGTLDELELFTDTFKRWDTESITRLPYYMQLCYWGVHNYISDAAYDILKEHGFFCLQYLRKSVVDLVEAYF 378 (549)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHTCSSGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCHHHHHHHHHHHHhcCccccccCccHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHh
Q 044500 81 EFFL 84 (86)
Q Consensus 81 ~~~~ 84 (86)
+||-
T Consensus 379 ~EAk 382 (549)
T 1n1b_A 379 HEAK 382 (549)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9984
No 10
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=99.90 E-value=1.6e-24 Score=174.31 Aligned_cols=81 Identities=10% Similarity=0.025 Sum_probs=71.6
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCcc---------ccCc---Cchh--HHHHHHHHHHHHHHHHHHHHHhccccHHH
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDTG---------AMVK---LPCY--MQICYLAMFNFGNDLAYYDLKIHGLNLLS 66 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~~---------~~~~---Lpey--mk~~f~~l~~~~~ei~~~~~~~~~~~~~~ 66 (86)
||+||+||+|| |||++||+||+|||++ +++. +|+| ||+||.+|++++||++.++.+.||+++++
T Consensus 510 tviDD~yD~yG--eEl~~ft~av~rwd~~~~~~~~~~~~~~~~~~~p~~~~mk~~f~aL~~t~nei~~~~~k~qg~~v~~ 587 (727)
T 3pya_A 510 KAISSSFGESS--DSRRSFSDQFHEYIANARRSDHHFNDRNMRLDRPGSVQASRLAGVLIGTLNQMSFDLFMSHGRDVNN 587 (727)
T ss_dssp HHHHHHHCSSH--HHHHHHHHHHHHHC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_pred HHHHHHHhcch--HHHHHHHHHHHhcccccccccccccchhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCchHH
Confidence 58999999999 9999999999999984 4433 3877 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 044500 67 NIKNEVANNVLGYFEFF 83 (86)
Q Consensus 67 ~lk~~~~~l~~ayl~~~ 83 (86)
|++++|++++++|++|+
T Consensus 588 ~l~~~W~~~l~s~~~Ea 604 (727)
T 3pya_A 588 LLYLSWGDWMEKWKLYG 604 (727)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999885
No 11
>1ps1_A Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP} SCOP: a.128.1.4 PDB: 1hm7_A 1hm4_A
Probab=99.54 E-value=4.8e-15 Score=107.61 Aligned_cols=77 Identities=16% Similarity=0.052 Sum_probs=68.7
Q ss_pred Cccccccccc--CCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Q 044500 1 MANDDMYDTY--GSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLG 78 (86)
Q Consensus 1 tv~DD~yD~y--gT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~a 78 (86)
+++||+||+| ||++|++.|+++++||+.+ .+|++++.+|++++++.+++++.+ +....+++++.|++++++
T Consensus 77 ~~~DD~~D~~~~~~~ee~~~~~~~l~~~~~~---~~p~~~~~~~~~l~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 149 (337)
T 1ps1_A 77 FLFDDLFDGPRGENPEDTKQLTDQVAAALDG---PLPDTAPPIAHGFADIWRRTCEGM----TPAWCARSARHWRNYFDG 149 (337)
T ss_dssp HHHHHTTSSGGGGCHHHHHHHHHHHHGGGTS---CCCTTSCHHHHHHHHHHHHHHTTS----CHHHHHHHHHHHHHHHHH
T ss_pred HHHhhccCCcCCCCHHHHHHHHHHHHHHcCC---CCCCCCChHHHHHHHHHHHHhccC----CHHHHHHHHHHHHHHHHH
Confidence 4689999999 6999999999999999864 589999999999999999998874 455678999999999999
Q ss_pred HHHHHh
Q 044500 79 YFEFFL 84 (86)
Q Consensus 79 yl~~~~ 84 (86)
++.|+-
T Consensus 150 ~~~Ea~ 155 (337)
T 1ps1_A 150 YVDEAE 155 (337)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 999874
No 12
>1di1_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid biosynthesis, lyase; 2.50A {Penicillium roqueforti} SCOP: a.128.1.4 PDB: 1dgp_A
Probab=99.43 E-value=6.3e-14 Score=100.00 Aligned_cols=69 Identities=12% Similarity=0.111 Sum_probs=62.2
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGYF 80 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ayl 80 (86)
+++||+||. ||++|++.|+++++||+.+ +.+|++|+.+|++++++++++++.+ + .+.++.|+.++++|+
T Consensus 73 ~~~DD~~D~-~~~~e~~~~~~~~~~~~~~--~~lp~~~~~~~~~l~d~~~~~~~~~-~-------~~~~~~~~~~~~~~~ 141 (300)
T 1di1_A 73 FLIDDVLEH-MSFADGEAYNNRLIPISRG--DVLPDRTKPEEFILYDLWESMRAHD-A-------ELANEVLEPTFVFMR 141 (300)
T ss_dssp HHHHHHHHH-SCHHHHHHHHHHHHHHHHT--SSCCCTTCHHHHHHHHHHHHHHHHH-H-------HHHHHHHHHHHHHHH
T ss_pred HHHHhcccc-CCHHHHHHHHHHHHHHccC--CCCCCCccHHHHHHHHHHHHHHhhC-h-------HHHHHHHHHHHHHHH
Confidence 368999999 8999999999999999875 5799999999999999999999887 2 367888999999997
No 13
>3bny_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid, farnesyl diphosphate, magnesium, cyclization, lyase; HET: FPF; 1.89A {Aspergillus terreus} PDB: 2e4o_A 2oa6_A* 3bnx_A* 3cke_A*
Probab=99.37 E-value=3.5e-13 Score=97.19 Aligned_cols=71 Identities=13% Similarity=0.157 Sum_probs=61.0
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGYF 80 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ayl 80 (86)
+++||+||. ||++|++.|+++++||+.+ +.+|++|+.+|++++++++++++.+ + .+.++.|+.+++ |+
T Consensus 87 ~~~DD~~D~-~~~~e~~~~~~~l~~~~~~--~~~p~~~~~~~~al~d~~~e~~~~~-~-------~~~~~~~~~~~~-~~ 154 (320)
T 3bny_A 87 FLIDDLLEY-MSFEEGSAYNEKLIPISRG--DVLPDRSIPVEYIIYDLWESMRAHD-R-------EMADEILEPVFL-FM 154 (320)
T ss_dssp HHHHHHHTT-SCHHHHHHHHHHHHHHHHT--SSCCCTTSHHHHHHHHHHHHHHHHH-H-------HHHHHTHHHHHH-HH
T ss_pred HHhhccccc-CChhhHHHHHHHHHHHhcC--CCCCCCcCHHHHHHHHHHHHHHhhC-H-------HHHHHHHHHHHH-HH
Confidence 368999999 8999999999999999975 5789999999999999999999875 2 366777887884 77
Q ss_pred HHH
Q 044500 81 EFF 83 (86)
Q Consensus 81 ~~~ 83 (86)
+++
T Consensus 155 ~e~ 157 (320)
T 3bny_A 155 RAQ 157 (320)
T ss_dssp HHT
T ss_pred HHH
Confidence 765
No 14
>3kb9_A EPI-isozizaene synthase; terpenoid cyclase, alpha-helical fold, farnesyl diphosphate, metal-binding, lyase, magnesium; HET: BTM; 1.60A {Streptomyces coelicolor} PDB: 3kbk_A 3lgk_A 3lg5_A*
Probab=99.05 E-value=3.2e-11 Score=89.99 Aligned_cols=78 Identities=8% Similarity=-0.105 Sum_probs=65.7
Q ss_pred cccccccc--cC-CHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Q 044500 2 ANDDMYDT--YG-SLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLG 78 (86)
Q Consensus 2 v~DD~yD~--yg-T~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~a 78 (86)
++||+||. || +++|++.|+++++++ .+....+|++++.+++++.++.++++..+.+. ..+++++.|+++++|
T Consensus 118 ~~DD~~D~~~~g~~~~~~~~~~~~l~~~-l~~~~~~p~~~~p~~~al~dl~~~~~~~~~~~----~~~r~~~~~~~~~~a 192 (382)
T 3kb9_A 118 VWDDRHDRDIVHGRAGAWRRLRGLLHTA-LDSPGDHLHHEDTLVAGFADSVRRLYAFLPAT----WNARFARHFHTVIEA 192 (382)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-HHSCGGGTTCSSHHHHHHHHHHHHHTTSSCHH----HHHHHHHHHHHHHHH
T ss_pred HHhhcccccccccCHHHHHHHHHHHHHH-hcCCCCCCCCCChHHHHHHHHHHHHHccCCHH----HHHHHHHHHHHHHHH
Confidence 68999998 77 999999999999986 22223369999999999999999998775443 478899999999999
Q ss_pred HHHHHh
Q 044500 79 YFEFFL 84 (86)
Q Consensus 79 yl~~~~ 84 (86)
|++|+-
T Consensus 193 ~l~Ea~ 198 (382)
T 3kb9_A 193 YDREFH 198 (382)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999973
No 15
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A*
Probab=92.49 E-value=0.14 Score=38.81 Aligned_cols=40 Identities=13% Similarity=-0.059 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh
Q 044500 41 CYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGYFEFFL 84 (86)
Q Consensus 41 ~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ayl~~~~ 84 (86)
+-.+++++++++.+.+.+.+ ..++++.|++++++|++|+-
T Consensus 237 ~~~al~d~~~~l~~~a~~~q----~~r~~~~~~~~~~a~l~EA~ 276 (433)
T 3v1v_A 237 PRRAYDSAMGYFVRAATPSQ----SDRYRHDMARLHLGYLAEGA 276 (433)
T ss_dssp HHHHHHHHHHHHHHHSCHHH----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 46888999999988765554 67889999999999999974
No 16
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=74.60 E-value=12 Score=22.90 Aligned_cols=68 Identities=13% Similarity=0.100 Sum_probs=44.7
Q ss_pred ccCCHHHHHHHHHHHHhcCc----------cccCcCc---h----hHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Q 044500 9 TYGSLDEVELFTDAVKRWDT----------GAMVKLP---C----YMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNE 71 (86)
Q Consensus 9 ~ygT~eEl~~ft~av~RWD~----------~~~~~Lp---e----ymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~ 71 (86)
+.|.+||++.|..-++|... +.-+.|. + ..--.|..+.++++.+.+.+.. .++||++.
T Consensus 4 a~~dpeElr~Fa~~L~~F~d~Lq~~~~~L~~~f~~L~sWqDqkr~kFee~fe~l~s~l~~f~e~a~e-----~vp~L~~~ 78 (94)
T 3fx7_A 4 VQMDTEEVREFVGHLERFKELLREEVNSLSNHFHNLESWRDARRDKFSEVLDNLKSTFNEFDEAAQE-----QIAWLKER 78 (94)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCSHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHhhHHHHHHHHHHHHHHHHHHHHHHhhHH-----HhHHHHHH
Confidence 45788999999888886532 1111222 1 2224577777788887775333 48999999
Q ss_pred HHHHHHHHHH
Q 044500 72 VANNVLGYFE 81 (86)
Q Consensus 72 ~~~l~~ayl~ 81 (86)
++-+-.-|+.
T Consensus 79 i~vle~~~~~ 88 (94)
T 3fx7_A 79 IRVLEEDYLE 88 (94)
T ss_dssp HHHHHHHHHC
T ss_pred HHHhHHHHHH
Confidence 9998888874
No 17
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=71.27 E-value=0.94 Score=29.90 Aligned_cols=20 Identities=25% Similarity=0.272 Sum_probs=16.5
Q ss_pred CcccccccccCCHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFT 20 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft 20 (86)
+++||++++.+|+.++....
T Consensus 121 LLVDDVitTG~Tl~aa~~~L 140 (186)
T 1l1q_A 121 LLHDDVLATGGTLLAAIELC 140 (186)
T ss_dssp EEEEEEESSSHHHHHHHHHH
T ss_pred EEEecccccHHHHHHHHHHH
Confidence 37899999999999886543
No 18
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=70.10 E-value=1 Score=29.07 Aligned_cols=19 Identities=11% Similarity=0.160 Sum_probs=15.9
Q ss_pred CcccccccccCCHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELF 19 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~f 19 (86)
+++||++++.+|+.++...
T Consensus 124 llVDDvitTG~Tl~~~~~~ 142 (175)
T 1vch_A 124 VLVSDVVASGETMRAMEKM 142 (175)
T ss_dssp EEEEEEESSSHHHHHHHHH
T ss_pred EEEeccccchHHHHHHHHH
Confidence 3789999999999888544
No 19
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=68.55 E-value=1.7 Score=27.85 Aligned_cols=20 Identities=25% Similarity=0.310 Sum_probs=16.3
Q ss_pred CcccccccccCCHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFT 20 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft 20 (86)
+++||+.|+.||+..+....
T Consensus 85 liVDDii~TG~Tl~~a~~~l 104 (152)
T 1nul_A 85 IVIDDLVDTGGTAVAIREMY 104 (152)
T ss_dssp EEEEEEECTTSSHHHHHHHC
T ss_pred EEEEeecCchHHHHHHHHHH
Confidence 37899999999998876543
No 20
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=68.26 E-value=1.1 Score=28.25 Aligned_cols=19 Identities=32% Similarity=0.179 Sum_probs=15.7
Q ss_pred CcccccccccCCHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELF 19 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~f 19 (86)
+++||++++.+|+.++...
T Consensus 87 llVDDvitTG~Tl~~a~~~ 105 (153)
T 1vdm_A 87 VIVDDVSDTGKTLEVVIEE 105 (153)
T ss_dssp EEEEEEESSCHHHHHHHHH
T ss_pred EEEecccCChHHHHHHHHH
Confidence 3789999999998887544
No 21
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=67.84 E-value=1.2 Score=29.37 Aligned_cols=19 Identities=11% Similarity=0.067 Sum_probs=15.8
Q ss_pred CcccccccccCCHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELF 19 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~f 19 (86)
+++||++++.+|+.++...
T Consensus 124 llVDDvitTG~Tl~~a~~~ 142 (197)
T 1y0b_A 124 LIIDDFLANGQAAHGLVSI 142 (197)
T ss_dssp EEEEEEESSCHHHHHHHHH
T ss_pred EEEEcccccCHHHHHHHHH
Confidence 3789999999999887543
No 22
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=65.43 E-value=1.5 Score=28.54 Aligned_cols=21 Identities=14% Similarity=-0.124 Sum_probs=16.8
Q ss_pred CcccccccccCCHHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFTD 21 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~ 21 (86)
+++||++++.+|+.++.....
T Consensus 102 llVDDvitTG~Tl~~a~~~L~ 122 (181)
T 1a3c_A 102 ILVDDVLYTGRTVRAGMDALV 122 (181)
T ss_dssp EEEEEEESSSHHHHHHHHHHH
T ss_pred EEEeCccCcHHHHHHHHHHHH
Confidence 378999999999988865443
No 23
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=64.37 E-value=1.6 Score=28.75 Aligned_cols=20 Identities=25% Similarity=0.247 Sum_probs=16.2
Q ss_pred CcccccccccCCHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFT 20 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft 20 (86)
+++||++++.+|+.++....
T Consensus 126 LlVDDvitTG~Tl~~~~~~L 145 (187)
T 1g2q_A 126 IIVDDIIATGGSAAAAGELV 145 (187)
T ss_dssp EEEEEEESSCHHHHHHHHHH
T ss_pred EEECCCcccHHHHHHHHHHH
Confidence 37899999999998876443
No 24
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=64.30 E-value=1.6 Score=28.48 Aligned_cols=21 Identities=14% Similarity=-0.159 Sum_probs=17.0
Q ss_pred CcccccccccCCHHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFTD 21 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~ 21 (86)
+++||++++.+|+.++.....
T Consensus 100 llVDDvitTG~Tl~~a~~~L~ 120 (181)
T 1ufr_A 100 VLVDDVLYTGRTARAALDALI 120 (181)
T ss_dssp EEEEEEESSSHHHHHHHHHHH
T ss_pred EEEecCCCcHHHHHHHHHHHH
Confidence 378999999999998865443
No 25
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=63.60 E-value=1.7 Score=28.71 Aligned_cols=20 Identities=20% Similarity=0.370 Sum_probs=16.2
Q ss_pred CcccccccccCCHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFT 20 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft 20 (86)
+++||++++.+|+.++....
T Consensus 130 LlVDDvitTG~Tl~~a~~~L 149 (190)
T 2dy0_A 130 LVVDDLLATGGTIEATVKLI 149 (190)
T ss_dssp EEEEEEESSCHHHHHHHHHH
T ss_pred EEEEccccchHHHHHHHHHH
Confidence 37899999999998875443
No 26
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=63.29 E-value=1.7 Score=28.25 Aligned_cols=19 Identities=21% Similarity=0.340 Sum_probs=15.9
Q ss_pred CcccccccccCCHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELF 19 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~f 19 (86)
+++||++++.+|+.++...
T Consensus 124 llVDDvitTG~Tl~~~~~~ 142 (180)
T 1zn8_A 124 VVVDDLLATGGTMNAACEL 142 (180)
T ss_dssp EEEEEEESSSHHHHHHHHH
T ss_pred EEEcCCcccHHHHHHHHHH
Confidence 3789999999999887544
No 27
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=63.11 E-value=1.7 Score=28.44 Aligned_cols=19 Identities=21% Similarity=0.094 Sum_probs=15.7
Q ss_pred CcccccccccCCHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELF 19 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~f 19 (86)
+++||+.|+.+|+.++...
T Consensus 110 llVDDvitTG~Tl~~~~~~ 128 (178)
T 2yzk_A 110 VVVDDVATTGTSIAKSIEV 128 (178)
T ss_dssp EEEEEEESSSHHHHHHHHH
T ss_pred EEEEeccCCcHHHHHHHHH
Confidence 3789999999998887544
No 28
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=62.40 E-value=7.8 Score=19.34 Aligned_cols=17 Identities=18% Similarity=0.390 Sum_probs=13.8
Q ss_pred ccCCHHHHHHHHHHHHh
Q 044500 9 TYGSLDEVELFTDAVKR 25 (86)
Q Consensus 9 ~ygT~eEl~~ft~av~R 25 (86)
+.||+|||+.+.+--++
T Consensus 10 vggtpeelkklkeeakk 26 (36)
T 2ki0_A 10 VGGTPEELKKLKEEAKK 26 (36)
T ss_dssp BCCCHHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHHHHh
Confidence 57999999998876555
No 29
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=60.80 E-value=2.1 Score=28.12 Aligned_cols=20 Identities=15% Similarity=-0.117 Sum_probs=16.3
Q ss_pred CcccccccccCCHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFT 20 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft 20 (86)
+++||+.++.+|+.++....
T Consensus 118 llVDDvitTG~Tl~~~~~~L 137 (180)
T 2p1z_A 118 LVVEDTTTTGNSPLTAVKAL 137 (180)
T ss_dssp EEEEEECSSSHHHHHHHHHH
T ss_pred EEEEeccCCcHHHHHHHHHH
Confidence 37899999999998875543
No 30
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=59.51 E-value=2 Score=28.07 Aligned_cols=19 Identities=16% Similarity=0.086 Sum_probs=15.7
Q ss_pred CcccccccccCCHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELF 19 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~f 19 (86)
+++||+.|+.||+.++...
T Consensus 99 llVDDvi~TG~Tl~~a~~~ 117 (183)
T 1hgx_A 99 LVVEDIIDTGLTMYQLLNN 117 (183)
T ss_dssp EEEEEEESSSHHHHHHHHH
T ss_pred EEECCccCCHHHHHHHHHH
Confidence 3789999999998887543
No 31
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=58.74 E-value=2.1 Score=28.59 Aligned_cols=24 Identities=13% Similarity=0.098 Sum_probs=17.9
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcC
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWD 27 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD 27 (86)
+++||+.|+.+|+.++.. ++++..
T Consensus 122 llVDDvi~TG~Tl~~a~~---~L~~~G 145 (205)
T 1yfz_A 122 LIVEDIIDSGLTLAYLRE---TLLGRK 145 (205)
T ss_dssp EEEEEEESSCHHHHHHHH---HHHTTC
T ss_pred EEECCccCcHHHHHHHHH---HHHhcC
Confidence 378999999999888754 445443
No 32
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=58.47 E-value=2.1 Score=28.09 Aligned_cols=24 Identities=13% Similarity=0.098 Sum_probs=18.0
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcC
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWD 27 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD 27 (86)
+++||+.|+.+|+.++.. ++++..
T Consensus 102 llVDDvi~TG~Tl~~a~~---~L~~~G 125 (185)
T 2geb_A 102 LIVEDIIDSGLTLAYLRE---TLLGRK 125 (185)
T ss_dssp EEEEEEESSCHHHHHHHH---HHHTTC
T ss_pred EEECCccCCHHHHHHHHH---HHHhcC
Confidence 378999999999888754 455543
No 33
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=57.28 E-value=3.9 Score=27.62 Aligned_cols=20 Identities=20% Similarity=0.144 Sum_probs=16.3
Q ss_pred CcccccccccCCHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFT 20 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft 20 (86)
+++||+.++.||+.++....
T Consensus 121 liVDDvitTG~Tl~~a~~~l 140 (213)
T 1lh0_A 121 MLVDDVITAGTAIRESMEII 140 (213)
T ss_dssp EEECSCCSSSCHHHHHHHHH
T ss_pred EEEEecccchHHHHHHHHHH
Confidence 37999999999998875443
No 34
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=56.06 E-value=2.7 Score=28.96 Aligned_cols=24 Identities=25% Similarity=0.091 Sum_probs=18.2
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcC
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWD 27 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD 27 (86)
+++||++++.||+.++.. ++++-.
T Consensus 142 LIVDDvitTG~Tl~~a~~---~L~~~G 165 (236)
T 1qb7_A 142 VLIDDVLATGGTALSGLQ---LVEASD 165 (236)
T ss_dssp EEEEEEESSCHHHHHHHH---HHHHTT
T ss_pred EEEecccccHHHHHHHHH---HHHHcC
Confidence 379999999999888754 455544
No 35
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=55.79 E-value=2.7 Score=28.15 Aligned_cols=25 Identities=24% Similarity=0.259 Sum_probs=19.0
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCc
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDT 28 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~ 28 (86)
+++||+.|+.||+.++. +++++-..
T Consensus 121 liVDDvitTG~Tl~~a~---~~L~~~Ga 145 (211)
T 2aee_A 121 VIIEDLISTGGSVLDAA---AAASREGA 145 (211)
T ss_dssp EEEEEEESSCHHHHHHH---HHHHHTTC
T ss_pred EEEeecccchHHHHHHH---HHHHHCCC
Confidence 37999999999988875 45555544
No 36
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=53.89 E-value=3.1 Score=27.91 Aligned_cols=24 Identities=13% Similarity=0.083 Sum_probs=18.1
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcC
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWD 27 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD 27 (86)
+++||++++.+|+.++.. ++++-.
T Consensus 115 liVDDvitTG~Tl~~a~~---~L~~~G 138 (205)
T 2wns_A 115 LIIEDVVTSGSSVLETVE---VLQKEG 138 (205)
T ss_dssp EEEEEEESSSHHHHHHHH---HHHHTT
T ss_pred EEEEEeccccHHHHHHHH---HHHHCC
Confidence 378999999999888754 455443
No 37
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=53.48 E-value=2.9 Score=28.61 Aligned_cols=19 Identities=21% Similarity=0.230 Sum_probs=15.6
Q ss_pred CcccccccccCCHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELF 19 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~f 19 (86)
+++||+.|+.+|+.++...
T Consensus 107 LLVDDii~TG~Tl~~a~~~ 125 (220)
T 1tc1_A 107 LIVEDIVDTALTLNYLYHM 125 (220)
T ss_dssp EEEEEEESSCHHHHHHHHH
T ss_pred EEEeCccCcHHHHHHHHHH
Confidence 3789999999998887543
No 38
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=52.14 E-value=3.4 Score=27.69 Aligned_cols=21 Identities=14% Similarity=-0.043 Sum_probs=16.8
Q ss_pred CcccccccccCCHHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFTD 21 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~ 21 (86)
+++||+.++.+|+.++.....
T Consensus 116 lLVDDVitTG~Tl~aa~~~L~ 136 (201)
T 1w30_A 116 ILVDDVLYSGRSVRSALDALR 136 (201)
T ss_dssp EEEEEEESSSHHHHHHHHHHH
T ss_pred EEECCccchHHHHHHHHHHHH
Confidence 378999999999988765443
No 39
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=51.48 E-value=3.5 Score=28.02 Aligned_cols=20 Identities=15% Similarity=0.152 Sum_probs=16.2
Q ss_pred CcccccccccCCHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFT 20 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft 20 (86)
+++||+.++.+|+.++....
T Consensus 129 lIVDDvitTG~Tl~~a~~~L 148 (226)
T 2ps1_A 129 LIIDDVMTAGTAINEAFEII 148 (226)
T ss_dssp EEEEEEESSSHHHHHHHHHH
T ss_pred EEEEecccChHHHHHHHHHH
Confidence 37999999999988875443
No 40
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=50.94 E-value=3.4 Score=27.92 Aligned_cols=24 Identities=17% Similarity=0.059 Sum_probs=17.9
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcC
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWD 27 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD 27 (86)
+++||+.|+.+|+.++.. ++++-.
T Consensus 122 llVDDvi~TG~Tl~aa~~---~L~~~G 145 (211)
T 1pzm_A 122 MLVEDIVDSAITLQYLMR---FMLAKK 145 (211)
T ss_dssp EEEEEEESSCHHHHHHHH---HHHTTC
T ss_pred EEECCccccHHHHHHHHH---HHHhcC
Confidence 378999999999887754 445443
No 41
>1ik9_C DNA ligase IV; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens}
Probab=50.30 E-value=8.3 Score=19.52 Aligned_cols=21 Identities=19% Similarity=0.244 Sum_probs=14.3
Q ss_pred ccccccccC---CHHHHHHHHHHH
Q 044500 3 NDDMYDTYG---SLDEVELFTDAV 23 (86)
Q Consensus 3 ~DD~yD~yg---T~eEl~~ft~av 23 (86)
.|.+.|+|. |.+||+...+.|
T Consensus 11 ~D~yGDSY~rd~t~~eLk~il~~m 34 (37)
T 1ik9_C 11 YDCYGDSYFIDTDLNQLKEVFSGI 34 (37)
T ss_dssp BCTTSCBSSSCCCHHHHHHHHHTC
T ss_pred cccccccccCcCCHHHHHHHHHHc
Confidence 355666664 899998766544
No 42
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=50.11 E-value=4.3 Score=27.05 Aligned_cols=26 Identities=19% Similarity=0.051 Sum_probs=19.5
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCcc
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDTG 29 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~~ 29 (86)
+++||+.|+.+|+.++. +++++-...
T Consensus 124 llVDDvi~TG~Tl~~a~---~~L~~~ga~ 149 (208)
T 1wd5_A 124 VLVDDGVATGASMEAAL---SVVFQEGPR 149 (208)
T ss_dssp EEECSCBSSCHHHHHHH---HHHHTTCCS
T ss_pred EEECCCccHHHHHHHHH---HHHHHcCCC
Confidence 37899999999988764 556665554
No 43
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=50.03 E-value=3.6 Score=27.48 Aligned_cols=25 Identities=16% Similarity=0.151 Sum_probs=18.2
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCc
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDT 28 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~ 28 (86)
+++||+.|+.+|+..+. +.+++-..
T Consensus 98 liVDDii~TG~Tl~~~~---~~l~~~g~ 122 (186)
T 3o7m_A 98 IVVEDIIDSGLTLHFLK---DHFFMHKP 122 (186)
T ss_dssp EEEEEEESSCHHHHHHH---HHHHTTCC
T ss_pred EEEcCeeCCcHHHHHHH---HHHHhcCC
Confidence 37899999999987765 44555443
No 44
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=49.29 E-value=4.2 Score=28.87 Aligned_cols=25 Identities=20% Similarity=0.271 Sum_probs=18.6
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCc
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDT 28 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~ 28 (86)
+++||+.|+.||+.++. +++++...
T Consensus 209 lIVDDii~TG~Tl~~aa---~~Lk~~Ga 233 (284)
T 1u9y_A 209 FIVDDIISTGGTMATAV---KLLKEQGA 233 (284)
T ss_dssp EEEEEECSSSHHHHHHH---HHHHHTTC
T ss_pred EEEecccCchHHHHHHH---HHHHHCCC
Confidence 37899999999988775 44555543
No 45
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=48.97 E-value=3.8 Score=27.14 Aligned_cols=25 Identities=20% Similarity=0.191 Sum_probs=18.2
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCc
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDT 28 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~ 28 (86)
+++||+.|+.+|+..+. +++++...
T Consensus 99 liVDDii~TG~Tl~~~~---~~l~~~g~ 123 (181)
T 2ywu_A 99 IVVEDIVDTGLTLSYLL---DYLEARKP 123 (181)
T ss_dssp EEEEEEESSSHHHHHHH---HHHHTTCC
T ss_pred EEECCeeCChHHHHHHH---HHHHhcCC
Confidence 37899999999987765 45555443
No 46
>3t72_q RNA polymerase sigma factor RPOD, DNA-directed RN polymerase subunit beta; winged-helix motif, transcription activation, DNA-binding; 4.33A {Escherichia coli} PDB: 1tlh_B
Probab=47.92 E-value=34 Score=20.39 Aligned_cols=29 Identities=7% Similarity=-0.150 Sum_probs=22.4
Q ss_pred ccCcCchhHHHHHHHHH-------HHHHHHHHHHHH
Q 044500 30 AMVKLPCYMQICYLAMF-------NFGNDLAYYDLK 58 (86)
Q Consensus 30 ~~~~Lpeymk~~f~~l~-------~~~~ei~~~~~~ 58 (86)
+++.||+.-|-++.--+ -+++||++.+.-
T Consensus 16 aL~~Lp~reR~Vi~Lry~l~~~e~~s~~EIA~~lgi 51 (99)
T 3t72_q 16 VLAGLTAREAKVLRMRFGIDMNTDYTLEEVGKQFDV 51 (99)
T ss_pred HHHcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHCc
Confidence 45679999888887766 389999988644
No 47
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=47.57 E-value=4.1 Score=27.95 Aligned_cols=25 Identities=24% Similarity=0.256 Sum_probs=18.6
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCc
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDT 28 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~ 28 (86)
+++||+.|+.+|+.++. +.+++...
T Consensus 146 LIVDDii~TG~Tl~~a~---~~L~~~ga 170 (233)
T 1fsg_A 146 LIVEDIVDTGFTLTEFG---ERLKAVGP 170 (233)
T ss_dssp EEEEEEESSSHHHHHHH---HHHHTTCC
T ss_pred EEEccccCcHHHHHHHH---HHHHhcCC
Confidence 37899999999988775 44555443
No 48
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=47.40 E-value=4.5 Score=27.62 Aligned_cols=21 Identities=19% Similarity=0.101 Sum_probs=16.9
Q ss_pred CcccccccccCCHHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFTD 21 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~ 21 (86)
+|+||+.|+.+|+..+.....
T Consensus 107 LIVDDIidTG~Tl~aa~~~L~ 127 (221)
T 2xbu_A 107 LIVDEVDDTRTTLHYALSELE 127 (221)
T ss_dssp EEEEEEESSSHHHHHHHHHHH
T ss_pred EEEeccCCcHHHHHHHHHHHH
Confidence 378999999999988765544
No 49
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=46.92 E-value=4.3 Score=26.79 Aligned_cols=25 Identities=20% Similarity=0.375 Sum_probs=18.4
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCc
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDT 28 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~ 28 (86)
+++||+.|+.+|+.++. +++++...
T Consensus 95 liVDDii~TG~Tl~~~~---~~l~~~g~ 119 (177)
T 3ohp_A 95 LLVEDIIDTGNTLNKVK---EILALREP 119 (177)
T ss_dssp EEEEEEESSCHHHHHHH---HHHHTTCC
T ss_pred EEEeeEeCcHHHHHHHH---HHHHhcCC
Confidence 37899999999987764 45555544
No 50
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=46.24 E-value=4.8 Score=27.38 Aligned_cols=25 Identities=20% Similarity=0.195 Sum_probs=18.1
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCc
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDT 28 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~ 28 (86)
+++||+.|+.||+..+. +++++...
T Consensus 120 liVDDii~TG~Tl~~~~---~~l~~~g~ 144 (204)
T 3hvu_A 120 LIVEDIIDSGLTLSYLV---DLFKYRKA 144 (204)
T ss_dssp EEEEEEESSCHHHHHHH---HHHHHTTC
T ss_pred EEEeceeCchHHHHHHH---HHHHHcCC
Confidence 37899999999987765 44555443
No 51
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=46.07 E-value=5.2 Score=28.89 Aligned_cols=24 Identities=25% Similarity=0.270 Sum_probs=18.2
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcC
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWD 27 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD 27 (86)
+++||++|+.||+.++.. ++++..
T Consensus 221 lLVDDiitTG~Tl~~aa~---~Lk~~G 244 (317)
T 1dku_A 221 ILIDDIIDTAGTITLAAN---ALVENG 244 (317)
T ss_dssp EEECSEESSCHHHHHHHH---HHHHTT
T ss_pred EEEecccCCCHHHHHHHH---HHHHcC
Confidence 378999999999888754 455544
No 52
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=45.07 E-value=49 Score=19.91 Aligned_cols=64 Identities=13% Similarity=0.093 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Q 044500 11 GSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGYF 80 (86)
Q Consensus 11 gT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ayl 80 (86)
+++||++....+..+ ++. .-|..+....+.++++|-.++..+..-+. .++-+|+....+=|.++
T Consensus 26 ~~IeelE~~L~s~s~--~~~--~Tpq~L~~~l~~~h~~FiaLAa~l~~lH~--~V~~~Ke~Yl~~rr~~~ 89 (93)
T 3t98_B 26 QQIEELENHLATQAN--NSH--ITPQDLSMAMQKIYQTFVALAAQLQSIHE--NVKVLKEQYLSYRKMFL 89 (93)
T ss_dssp HHHHHHHHHHSCHHH--HTT--SCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccC--CCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHh
Confidence 467777777665432 222 23667777777777777777776655443 35556666666555543
No 53
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=44.31 E-value=5 Score=27.30 Aligned_cols=25 Identities=8% Similarity=0.282 Sum_probs=18.7
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCc
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDT 28 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~ 28 (86)
+++||+.|+.+|+.++. +++++...
T Consensus 138 llVDDii~TG~Tl~~a~---~~L~~~ga 162 (225)
T 2jbh_A 138 LIVEDVVGTGRTMKALL---SNIEKYKP 162 (225)
T ss_dssp EEEEEEESSSHHHHHHH---HHHHTTCC
T ss_pred EEEccccCcHHHHHHHH---HHHHhcCC
Confidence 37899999999987765 44555544
No 54
>4dhi_B Ubiquitin thioesterase otubain-like; ubiquitin E2 enzyme fold, ubiquitination, hydrolase-ligase C; 1.80A {Caenorhabditis elegans} PDB: 4dhj_A 4dhz_A
Probab=44.17 E-value=86 Score=22.50 Aligned_cols=43 Identities=12% Similarity=0.235 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHHHhcCcccc-CcCchh-HHHHHHHHHHHHHHHHH
Q 044500 12 SLDEVELFTDAVKRWDTGAM-VKLPCY-MQICYLAMFNFGNDLAY 54 (86)
Q Consensus 12 T~eEl~~ft~av~RWD~~~~-~~Lpey-mk~~f~~l~~~~~ei~~ 54 (86)
+.+|+..|.+++++|....+ -+.|+. ...++..+.+.++.|++
T Consensus 104 ~~~e~~r~~~~~~~s~~~L~~~G~~~~~~eDF~d~f~ell~~i~~ 148 (284)
T 4dhi_B 104 DRARLEKFIASSRDWTRTLVELGFPDWTCTDFCDFFIEFLEKIHS 148 (284)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCchhhHHHHHHHHHHHHHHHhc
Confidence 45789999999999876544 345665 45666666666666643
No 55
>1lq7_A Alpha3W; three helix bundle, de novo protein; NMR {} SCOP: k.9.1.1
Probab=44.17 E-value=41 Score=18.76 Aligned_cols=36 Identities=11% Similarity=-0.072 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Q 044500 43 LAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLG 78 (86)
Q Consensus 43 ~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~a 78 (86)
+++-.-++.+++.+..-+|.-++.-+++-|.++-+-
T Consensus 5 kaleekvkaleekvkalggggrieelkkkweelkkk 40 (67)
T 1lq7_A 5 KALEEKVKALEEKVKALGGGGRIEELKKKWEELKKK 40 (67)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHH
Confidence 345556677788888888888899999999887653
No 56
>2idx_A COB(I)yrinic acid A,C-diamide adenosyltransferase; ATP, cobalamin; HET: ATP; 2.50A {Homo sapiens}
Probab=43.33 E-value=9.3 Score=26.06 Aligned_cols=47 Identities=17% Similarity=0.146 Sum_probs=26.2
Q ss_pred ccccCCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHH
Q 044500 7 YDTYGSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLA 53 (86)
Q Consensus 7 yD~ygT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~ 53 (86)
..+|||+|||..++-....--.+.-+.+.+.+.-+-..|++.-.+++
T Consensus 29 ieayGtvDElns~iGla~~~~~~~~~~~~~~L~~IQ~~Lf~lga~La 75 (196)
T 2idx_A 29 FEAVGTTDELSSAIGFALELVTEKGHTFAEELQKIQCTLQDVGSALA 75 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred hheeccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHc
Confidence 57899999999998755431111001233444455555555544443
No 57
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=43.20 E-value=16 Score=27.02 Aligned_cols=19 Identities=16% Similarity=0.328 Sum_probs=16.6
Q ss_pred ccCCHHHHHHHHHHHHhcC
Q 044500 9 TYGSLDEVELFTDAVKRWD 27 (86)
Q Consensus 9 ~ygT~eEl~~ft~av~RWD 27 (86)
.|||.+|++.|+++..+=.
T Consensus 74 ~~Gt~~df~~lv~~aH~~G 92 (483)
T 3bh4_A 74 KYGTKSELQDAIGSLHSRN 92 (483)
T ss_dssp SSCCHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHCC
Confidence 7899999999999988644
No 58
>1x9b_A Hypothetical membrane protein TA0354_69_121; alpha protein, structural genomics, protein structure initiative, PSI; NMR {Thermoplasma acidophilum} SCOP: a.10.2.1
Probab=42.80 E-value=38 Score=18.49 Aligned_cols=28 Identities=14% Similarity=0.082 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHhccccH--HHHHHHHHH
Q 044500 46 FNFGNDLAYYDLKIHGLNL--LSNIKNEVA 73 (86)
Q Consensus 46 ~~~~~ei~~~~~~~~~~~~--~~~lk~~~~ 73 (86)
.+..+|+|+-..+-+++|. +...|+.|+
T Consensus 22 v~nL~ELE~is~rlg~~Y~~~LeeaK~kWk 51 (53)
T 1x9b_A 22 VRNLNELEALAVRLGKSYRIQLDQAKEKWK 51 (53)
T ss_dssp HHHHHHHHHHHHHHCSHHHHHHHHHHHHHC
T ss_pred HHhHHHHHHHHHHHchHHHHHHHHHHHhhc
Confidence 3445666666666677764 477888885
No 59
>2zhy_A ATP:COB(I)alamin adenosyltransferase, putative; helix bundle; 1.80A {Burkholderia thailandensis} PDB: 2zhz_A*
Probab=41.64 E-value=10 Score=25.65 Aligned_cols=19 Identities=16% Similarity=0.207 Sum_probs=15.9
Q ss_pred cccccCCHHHHHHHHHHHH
Q 044500 6 MYDTYGSLDEVELFTDAVK 24 (86)
Q Consensus 6 ~yD~ygT~eEl~~ft~av~ 24 (86)
-.+.|||+|||..++-...
T Consensus 32 riea~G~vDElns~iGla~ 50 (183)
T 2zhy_A 32 RIAAIGDVDELNSQIGVLL 50 (183)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred eeeeeeeHHHHHHHHHHHH
Confidence 4788999999999987654
No 60
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=41.05 E-value=18 Score=27.18 Aligned_cols=20 Identities=15% Similarity=0.106 Sum_probs=17.1
Q ss_pred ccCCHHHHHHHHHHHHhcCc
Q 044500 9 TYGSLDEVELFTDAVKRWDT 28 (86)
Q Consensus 9 ~ygT~eEl~~ft~av~RWD~ 28 (86)
.|||.+|++.|+++..+=.+
T Consensus 77 ~~Gt~~dfk~Lv~~aH~~Gi 96 (515)
T 1hvx_A 77 KYGTKAQYLQAIQAAHAAGM 96 (515)
T ss_dssp SSCCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHCCC
Confidence 68999999999999987543
No 61
>3ro3_B Minsc, peptide of protein inscuteable homolog; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=40.97 E-value=8.7 Score=17.45 Aligned_cols=8 Identities=50% Similarity=1.107 Sum_probs=6.3
Q ss_pred HHHHHhcC
Q 044500 20 TDAVKRWD 27 (86)
Q Consensus 20 t~av~RWD 27 (86)
+++|+||=
T Consensus 7 vDSV~rWm 14 (22)
T 3ro3_B 7 VDSVQRWM 14 (26)
T ss_pred hHHHHHHH
Confidence 57899994
No 62
>2izx_A CAMP-dependent protein kinase type II-alpha regulatory subunit; CAMP-binding, phosphorylation, nucleotide-binding, PKA, CAMP, anchor, kinase, acetylation; 1.3A {Homo sapiens} PDB: 2hwn_A
Probab=40.96 E-value=34 Score=16.97 Aligned_cols=31 Identities=6% Similarity=-0.112 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Q 044500 47 NFGNDLAYYDLKIHGLNLLSNIKNEVANNVL 77 (86)
Q Consensus 47 ~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ 77 (86)
..++++..++.+.|-.+++.+..+-+..+.+
T Consensus 9 ~lL~~~~~~vl~~qP~di~~f~a~yF~~l~~ 39 (41)
T 2izx_A 9 ELLQGYTVEVLRQQPPDLVEFAVEYFTRLRE 39 (41)
T ss_dssp HHHHHHHHHHHHHCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHhh
Confidence 3466777788888888988888888877765
No 63
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=40.64 E-value=5.2 Score=28.52 Aligned_cols=19 Identities=16% Similarity=0.305 Sum_probs=15.8
Q ss_pred CcccccccccCCHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELF 19 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~f 19 (86)
+++||++++.||+.++...
T Consensus 200 LIVDDViTTG~Tl~~a~~~ 218 (291)
T 1o57_A 200 LIIDDFMKAGGTINGMINL 218 (291)
T ss_dssp EEEEEEESSSHHHHHHHHH
T ss_pred EEEEEEcCcHHHHHHHHHH
Confidence 3789999999999888543
No 64
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=39.88 E-value=5.6 Score=26.93 Aligned_cols=25 Identities=16% Similarity=0.381 Sum_probs=18.6
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCc
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDT 28 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~ 28 (86)
+++||+.|+.+|+.++. +++++...
T Consensus 130 liVDDii~TG~Tl~~~~---~~L~~~g~ 154 (217)
T 1z7g_A 130 LIVEDIIDTGKTMQTLL---SLVRQYNP 154 (217)
T ss_dssp EEEEEECCCHHHHHHHH---HHHHTTCC
T ss_pred EEEeceeCcHHHHHHHH---HHHHhcCC
Confidence 37899999999988775 44555444
No 65
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=39.54 E-value=20 Score=26.50 Aligned_cols=20 Identities=25% Similarity=0.370 Sum_probs=17.2
Q ss_pred ccCCHHHHHHHHHHHHhcCc
Q 044500 9 TYGSLDEVELFTDAVKRWDT 28 (86)
Q Consensus 9 ~ygT~eEl~~ft~av~RWD~ 28 (86)
.|||.+|++.|+++..+=.+
T Consensus 76 ~~Gt~~df~~lv~~aH~~Gi 95 (480)
T 1ud2_A 76 KYGTKAQLERAIGSLKSNDI 95 (480)
T ss_dssp SSCCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHCCC
Confidence 68999999999999887543
No 66
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=39.26 E-value=20 Score=26.50 Aligned_cols=19 Identities=16% Similarity=0.333 Sum_probs=16.7
Q ss_pred ccCCHHHHHHHHHHHHhcC
Q 044500 9 TYGSLDEVELFTDAVKRWD 27 (86)
Q Consensus 9 ~ygT~eEl~~ft~av~RWD 27 (86)
.|||.+|++.|+++..+=.
T Consensus 78 ~~Gt~~df~~Lv~~aH~~G 96 (485)
T 1wpc_A 78 KYGTRSQLQAAVTSLKNNG 96 (485)
T ss_dssp SSCCHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHCC
Confidence 6899999999999988654
No 67
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=38.87 E-value=19 Score=25.95 Aligned_cols=20 Identities=15% Similarity=0.135 Sum_probs=17.5
Q ss_pred ccCCHHHHHHHHHHHHhcCc
Q 044500 9 TYGSLDEVELFTDAVKRWDT 28 (86)
Q Consensus 9 ~ygT~eEl~~ft~av~RWD~ 28 (86)
.|||.+|++.|+++..+=.+
T Consensus 72 ~~Gt~~df~~lv~~aH~~Gi 91 (496)
T 4gqr_A 72 RSGNEDEFRNMVTRCNNVGV 91 (496)
T ss_dssp TTBCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHCCC
Confidence 68999999999999997544
No 68
>1wy1_A Hypothetical protein PH0671; structural genomics, riken structural genomics/proteomics in RSGI, transferase; 1.80A {Pyrococcus horikoshii}
Probab=38.72 E-value=12 Score=24.94 Aligned_cols=19 Identities=32% Similarity=0.588 Sum_probs=15.8
Q ss_pred cccccCCHHHHHHHHHHHH
Q 044500 6 MYDTYGSLDEVELFTDAVK 24 (86)
Q Consensus 6 ~yD~ygT~eEl~~ft~av~ 24 (86)
-.+.|||+|||..++-...
T Consensus 27 riea~G~vDElns~iGla~ 45 (172)
T 1wy1_A 27 IIEANGTLDELTSFIGEAK 45 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHG
T ss_pred eeEEeeeHHHHHHHHHHHH
Confidence 3678999999999987664
No 69
>3ci3_A Cobalamin adenosyltransferase PDUO-like protein; adenosyltransferase variant, adenosylcobalamin binding, ATP binding; HET: 3PO 5AD B12; 1.11A {Lactobacillus reuteri} PDB: 3ci1_A* 3ci4_A* 2r6t_A* 2r6x_A* 3gah_A* 3gai_A* 3gaj_A*
Probab=38.35 E-value=20 Score=24.39 Aligned_cols=48 Identities=23% Similarity=0.316 Sum_probs=27.0
Q ss_pred cccccCCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHH
Q 044500 6 MYDTYGSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLA 53 (86)
Q Consensus 6 ~yD~ygT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~ 53 (86)
-..+|||+|||..++-....--...-+.+-+.+.-+-..|++.-.+++
T Consensus 33 rieayGtvDElns~iGla~~~~~~~~~~~~~~L~~IQ~~Lf~lga~la 80 (194)
T 3ci3_A 33 RVAAYGEVDELNSWVGYTKSLINSHTQVLSNELEEIQQLLFDCGHDLA 80 (194)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCTTTGGGHHHHHHHHHHHHHHHHHHT
T ss_pred hhheeccHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHc
Confidence 367899999999998765431100112233445555555555544443
No 70
>1yyq_A Trichodiene synthase; terpenoid cyclase fold, site-directed mutant, pyrophosphate, lyase; 2.10A {Fusarium sporotrichioides} PDB: 1yj4_A 1yyr_A* 1yys_A* 1jfa_A 1jfg_A 2q9y_A* 2q9z_A 2ael_A* 2aek_A* 2aet_A 2ps7_A 2ps8_A 1kiy_A 1kiz_A 1yyt_A* 1yyu_A* 2ps5_A 2ps4_A 2ps6_A
Probab=38.25 E-value=77 Score=23.30 Aligned_cols=68 Identities=13% Similarity=0.037 Sum_probs=39.9
Q ss_pred cccccccccCCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Q 044500 2 ANDDMYDTYGSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGYFE 81 (86)
Q Consensus 2 v~DD~yD~ygT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ayl~ 81 (86)
++||.+|.-+ +++..|.+.+-+ .. .+ +. .+..++-+...++ .+.-+.....-+.+.|.+.+.+...
T Consensus 98 ~lDD~~d~~~--~~l~~~~~~ll~---G~-~~-~~---Pl~~al~dl~~rl----~~~~~p~~~~rf~~s~~~~~~a~~~ 163 (374)
T 1yyq_A 98 VLDDSKDDPY--PTMVNYFDDLQA---GR-EQ-AH---PWWALVNEHFPNV----LRHFGPFCSLNLIRSTLDFFEGCWI 163 (374)
T ss_dssp HHTTCCSCSH--HHHTTHHHHHHH---TC-CC-SS---HHHHHHHHHHHHH----HTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccccCcH--HHHHHHHHHHhc---CC-CC-CC---hHHHHHHHHHHHH----HHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 5899998543 788888887765 11 11 11 2334444444444 3334444555566777777777766
Q ss_pred HH
Q 044500 82 FF 83 (86)
Q Consensus 82 ~~ 83 (86)
|+
T Consensus 164 Ea 165 (374)
T 1yyq_A 164 EQ 165 (374)
T ss_dssp HT
T ss_pred HH
Confidence 64
No 71
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=38.02 E-value=7.7 Score=26.93 Aligned_cols=24 Identities=21% Similarity=0.228 Sum_probs=18.2
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcC
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWD 27 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD 27 (86)
+|+||+.++.||+.+.. +++++-.
T Consensus 141 LIVDDvitTG~Tl~~a~---~~L~~~G 164 (234)
T 3m3h_A 141 VVVEDLISTGGSAITCV---EALREAG 164 (234)
T ss_dssp EEEEEEESSSHHHHHHH---HHHHHTT
T ss_pred EEEecccchhHHHHHHH---HHHHHCC
Confidence 37899999999988775 4555544
No 72
>1ku3_A Sigma factor SIGA; helix-turn-helix, transcription; 1.80A {Thermus aquaticus} SCOP: a.4.13.2 PDB: 1ku7_A 1rio_H 3n97_A*
Probab=37.31 E-value=50 Score=17.75 Aligned_cols=47 Identities=9% Similarity=-0.116 Sum_probs=30.7
Q ss_pred cccCcCchhHHHHHHHHHH-------HHHHHHHHHHHhccccHHHHHHHHHHHHH
Q 044500 29 GAMVKLPCYMQICYLAMFN-------FGNDLAYYDLKIHGLNLLSNIKNEVANNV 76 (86)
Q Consensus 29 ~~~~~Lpeymk~~f~~l~~-------~~~ei~~~~~~~~~~~~~~~lk~~~~~l~ 76 (86)
.+++.||+.-+-++...+- ++.||++.+... .+.+-.++..+.+.+-
T Consensus 6 ~~l~~L~~~er~il~l~~~l~~~~~~s~~eIA~~l~is-~~tV~~~~~ra~~kLr 59 (73)
T 1ku3_A 6 KALSKLSEREAMVLKMRKGLIDGREHTLEEVGAYFGVT-RERIRQIENKALRKLK 59 (73)
T ss_dssp SSTTTSCHHHHHHHHHHHTTTTSSCCCHHHHHHHHTCC-HHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHhcccCCCCCHHHHHHHHCCC-HHHHHHHHHHHHHHHH
Confidence 4678899888887777762 789999886442 2233345555555554
No 73
>2p7v_B Sigma-70, RNA polymerase sigma factor RPOD; RSD, regulator of sigma 70, sigma 70 domain 4, transcription, regulation, helix-turn-helix; 2.60A {Escherichia coli} SCOP: a.4.13.2
Probab=36.77 E-value=29 Score=18.50 Aligned_cols=45 Identities=4% Similarity=-0.165 Sum_probs=28.9
Q ss_pred ccCcCchhHHHHHHHHH-------HHHHHHHHHHHHhccccHHHHHHHHHHHH
Q 044500 30 AMVKLPCYMQICYLAMF-------NFGNDLAYYDLKIHGLNLLSNIKNEVANN 75 (86)
Q Consensus 30 ~~~~Lpeymk~~f~~l~-------~~~~ei~~~~~~~~~~~~~~~lk~~~~~l 75 (86)
+++.||+.-+-++...+ -++.||++.+.-. .+.+-.++..+.+.+
T Consensus 2 ~l~~L~~~er~il~l~~~l~~~~g~s~~eIA~~lgis-~~tV~~~~~ra~~kL 53 (68)
T 2p7v_B 2 VLAGLTAREAKVLRMRFGIDMNTDYTLEEVGKQFDVT-RERIRQIEAKALRKL 53 (68)
T ss_dssp CSCCCCHHHHHHHHHHTTTTSSSCCCHHHHHHHHTCC-HHHHHHHHHHHHHGG
T ss_pred HHHcCCHHHHHHHHHHHccCCCCCCCHHHHHHHHCcC-HHHHHHHHHHHHHHH
Confidence 56789988888888877 3799999886442 222334444444433
No 74
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=36.68 E-value=8.2 Score=27.59 Aligned_cols=19 Identities=21% Similarity=0.328 Sum_probs=15.3
Q ss_pred CcccccccccCCHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELF 19 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~f 19 (86)
+++||+.|+.||+.+....
T Consensus 207 liVDDii~TG~Tl~~a~~~ 225 (286)
T 3lrt_A 207 LIVDDIISTGGTIAKSSGL 225 (286)
T ss_dssp EEEEEEESSCHHHHHHHHH
T ss_pred EEEeccccccHHHHHHHHH
Confidence 3789999999998776543
No 75
>2nt8_A Cobalamin adenosyltransferase; ATP binding; HET: ATP; 1.68A {Lactobacillus reuteri}
Probab=36.19 E-value=23 Score=24.69 Aligned_cols=48 Identities=23% Similarity=0.316 Sum_probs=27.0
Q ss_pred cccccCCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHH
Q 044500 6 MYDTYGSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLA 53 (86)
Q Consensus 6 ~yD~ygT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~ 53 (86)
-..+|||+|||..++-....--...-+.+-+.+.-+-..|++.-.+++
T Consensus 62 RIeayGtvDELnS~IGla~~~~~~~~~~~~~~L~~IQ~~Lfdlga~La 109 (223)
T 2nt8_A 62 RVAAYGEVDELNSWVGYTKSLINSHTQVLSNELEEIQQLLFDCGHDLA 109 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGGGGHHHHHHHHHHHHHHHHHHT
T ss_pred hheeeehHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHc
Confidence 367899999999998765431100112244445555555555544443
No 76
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=36.10 E-value=8.6 Score=26.86 Aligned_cols=24 Identities=25% Similarity=0.255 Sum_probs=18.4
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcC
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWD 27 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD 27 (86)
+|+||+.++.||+.++. +++++-.
T Consensus 153 LIVDDvitTG~Tl~~a~---~~L~~~G 176 (243)
T 3dez_A 153 VIIEDLISTGGSVLDAV---AAAQREG 176 (243)
T ss_dssp EEEEEEESSSHHHHHHH---HHHHHTT
T ss_pred EEEEeeccccHHHHHHH---HHHHHCC
Confidence 47899999999988875 4555544
No 77
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=35.88 E-value=9.5 Score=26.44 Aligned_cols=24 Identities=17% Similarity=0.142 Sum_probs=18.3
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcC
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWD 27 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD 27 (86)
+|+||+.++.||+.++. +++++-.
T Consensus 140 LIVDDVitTG~Tl~~a~---~~L~~~G 163 (232)
T 3mjd_A 140 LLIDDVMTAGTAFYESY---NKLKIIN 163 (232)
T ss_dssp EEECSCCSSSHHHHHHH---HHHHTTT
T ss_pred EEEEeeccccHHHHHHH---HHHHHCC
Confidence 47899999999988875 5555543
No 78
>1nog_A Conserved hypothetical protein TA0546; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics; 1.55A {Thermoplasma acidophilum} SCOP: a.25.2.2
Probab=35.70 E-value=18 Score=24.30 Aligned_cols=19 Identities=21% Similarity=0.415 Sum_probs=15.7
Q ss_pred cccccCCHHHHHHHHHHHH
Q 044500 6 MYDTYGSLDEVELFTDAVK 24 (86)
Q Consensus 6 ~yD~ygT~eEl~~ft~av~ 24 (86)
-..+|||+|||..++-...
T Consensus 25 riea~GtvDElns~iGla~ 43 (177)
T 1nog_A 25 VVEVQGTIDELNSFIGYAL 43 (177)
T ss_dssp SHHHHHHHHHHHHHHHHHH
T ss_pred hheeeehHHHHHHHHHHHH
Confidence 4678999999999987554
No 79
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=34.50 E-value=7.5 Score=26.91 Aligned_cols=19 Identities=11% Similarity=0.071 Sum_probs=15.6
Q ss_pred CcccccccccCCHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELF 19 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~f 19 (86)
+++||+.|+.+|+..+...
T Consensus 122 LIVDDIidTG~Tl~~a~~~ 140 (230)
T 1dqn_A 122 VLIDEYVDSGHTIFSIQEQ 140 (230)
T ss_dssp EEEEEEESSSHHHHHHHHH
T ss_pred EEEeeEcChHHHHHHHHHH
Confidence 3789999999998887654
No 80
>1n45_A Heme oxygenase 1, HO-1; alpha helices, heme-binding site, oxidoreductase; HET: HEM; 1.50A {Homo sapiens} SCOP: a.132.1.1 PDB: 1n3u_A* 1ozr_A* 1ozw_A* 1s13_A* 1s8c_A* 1t5p_A* 1twn_A* 1twr_A* 3czy_A* 3hok_A* 3k4f_A* 3tgm_A* 1xjz_A* 1xk3_A* 1xk2_A* 1ozl_A* 1oyk_A* 1oze_A* 1oyl_A* 1xk0_A* ...
Probab=34.11 E-value=53 Score=22.29 Aligned_cols=50 Identities=6% Similarity=0.089 Sum_probs=33.9
Q ss_pred cccccC--CHHHHHH-HHHHHHh--cCccccCcCchhHHHHHHHHHHHHHHHHHH
Q 044500 6 MYDTYG--SLDEVEL-FTDAVKR--WDTGAMVKLPCYMQICYLAMFNFGNDLAYY 55 (86)
Q Consensus 6 ~yD~yg--T~eEl~~-ft~av~R--WD~~~~~~Lpeymk~~f~~l~~~~~ei~~~ 55 (86)
+|+.+| +.+..+. |.+++.+ ||...-+.+=+..+..|...-+.+.+++..
T Consensus 166 f~~f~~~~~~~~~k~~fr~~Ld~~~l~~~e~~~ii~eA~~aF~~n~~i~~el~~~ 220 (233)
T 1n45_A 166 FFTFPNIASATKFKQLYRSRMNSLEMTPAVRQRVIEEAKTAFLLNIQLFEELQEL 220 (233)
T ss_dssp GGCCTTCSCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeccCCcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566665 7788888 8888887 444444445566677777777777777654
No 81
>4f9k_A CAMP-dependent protein kinase type I-beta regulat subunit; structural genomics, PSI-biology; 2.80A {Homo sapiens} PDB: 2ezw_A 3im3_A 3im4_A
Probab=34.06 E-value=36 Score=20.84 Aligned_cols=49 Identities=6% Similarity=-0.077 Sum_probs=36.9
Q ss_pred cccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Q 044500 29 GAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGY 79 (86)
Q Consensus 29 ~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ay 79 (86)
.++.++..|++. ..+-+.++++--++...+-.+.+.|+++.+.+|-++=
T Consensus 35 ~~l~~ce~Ylqk--hgI~eLLqe~tv~Ll~~RPeDPv~FLaeYF~kL~~~r 83 (95)
T 4f9k_A 35 ESLKGCELYVQL--HGIQQVLKDCIVHLCISKPERPMKFLREHFEKLEKEE 83 (95)
T ss_dssp ---CTTHHHHHH--TCTTTTTHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--cCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 466677888876 6677777888888888888899999999998886653
No 82
>1tty_A Sigma-A, RNA polymerase sigma factor RPOD; helix-turn-helix, transcription; NMR {Thermotoga maritima} SCOP: a.4.13.2
Probab=33.83 E-value=53 Score=18.44 Aligned_cols=45 Identities=4% Similarity=-0.087 Sum_probs=28.3
Q ss_pred ccCcCchhHHHHHHHHH-------HHHHHHHHHHHHhccccHHHHHHHHHHHH
Q 044500 30 AMVKLPCYMQICYLAMF-------NFGNDLAYYDLKIHGLNLLSNIKNEVANN 75 (86)
Q Consensus 30 ~~~~Lpeymk~~f~~l~-------~~~~ei~~~~~~~~~~~~~~~lk~~~~~l 75 (86)
+++.||+.-+-++...+ -++.||++.+... .+.+-.++..+.+.+
T Consensus 15 ~l~~L~~~er~vl~l~~~l~~~~~~s~~EIA~~lgis-~~tV~~~~~ra~~kL 66 (87)
T 1tty_A 15 VLKTLSPREAMVLRMRYGLLDGKPKTLEEVGQYFNVT-RERIRQIEVKALRKL 66 (87)
T ss_dssp HHTTSCHHHHHHHHHHHTTTTSSCCCHHHHHHHHTCC-HHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHccCCCCCCCHHHHHHHHCCC-HHHHHHHHHHHHHHH
Confidence 45679988887777766 2799999886442 222334455554444
No 83
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=33.34 E-value=7.8 Score=27.32 Aligned_cols=25 Identities=20% Similarity=0.347 Sum_probs=18.3
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCc
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDT 28 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~ 28 (86)
+++||+.|+.+|+..+. +.+++..+
T Consensus 160 lIVDDii~TG~Tl~~~~---~~L~~~g~ 184 (250)
T 3ozf_A 160 LIVEDIIDTGKTLVKFC---EYLKKFEI 184 (250)
T ss_dssp EEEEEEESSSHHHHHHH---HHHGGGCC
T ss_pred EEEeceeCchHHHHHHH---HHHHhcCC
Confidence 37899999999977765 45555443
No 84
>2izy_A CAMP-dependent protein kinase regulatory subunit II; D/D, RII, PKA, acetylation, transferase, CAMP- binding, phosphorylation, nucleotide-binding; 2.2A {Mus musculus} SCOP: a.31.1.1 PDB: 1l6e_A 1r2a_A 2drn_A 2h9r_A
Probab=33.10 E-value=59 Score=17.42 Aligned_cols=30 Identities=7% Similarity=-0.123 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHHH
Q 044500 48 FGNDLAYYDLKIHGLNLLSNIKNEVANNVL 77 (86)
Q Consensus 48 ~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ 77 (86)
.++++..++.+.|-.+++.++.+-+..+.+
T Consensus 13 lL~~f~~evlr~qP~Di~~Faa~YF~~L~~ 42 (54)
T 2izy_A 13 LLQGYTVEVLRQQPPDLVDFAVEYFTRLRE 42 (54)
T ss_dssp HHHHHHHHHHHHCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 355566677777777888888777777665
No 85
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=32.90 E-value=10 Score=27.56 Aligned_cols=19 Identities=37% Similarity=0.438 Sum_probs=15.2
Q ss_pred CcccccccccCCHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELF 19 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~f 19 (86)
+++||+.|+.||+.++...
T Consensus 220 iiVDDii~TG~Tl~~a~~~ 238 (319)
T 3dah_A 220 VIMDDMVDTAGTLCKAAQV 238 (319)
T ss_dssp EEEEEEESSCHHHHHHHHH
T ss_pred EEEecccCchHHHHHHHHH
Confidence 3789999999998876433
No 86
>1woz_A 177AA long conserved hypothetical protein (ST1454; structural genomics, unknown function; 1.94A {Sulfolobus tokodaii}
Probab=32.69 E-value=17 Score=24.34 Aligned_cols=18 Identities=28% Similarity=0.392 Sum_probs=15.1
Q ss_pred ccccCCHHHHHHHHHHHH
Q 044500 7 YDTYGSLDEVELFTDAVK 24 (86)
Q Consensus 7 yD~ygT~eEl~~ft~av~ 24 (86)
..+|||+|||..++-...
T Consensus 25 iea~GtvDElns~iGla~ 42 (177)
T 1woz_A 25 VNFLGDLDELNSFIGFAI 42 (177)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hhhhccHHHHHHHHHHHH
Confidence 678999999999987554
No 87
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=31.70 E-value=11 Score=27.53 Aligned_cols=19 Identities=32% Similarity=0.321 Sum_probs=15.2
Q ss_pred CcccccccccCCHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELF 19 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~f 19 (86)
+++||+.|+.||+.+....
T Consensus 217 iIVDDii~TG~Tl~~a~~~ 235 (326)
T 3s5j_B 217 ILVDDMADTCGTICHAADK 235 (326)
T ss_dssp EEEEEEESSCHHHHHHHHH
T ss_pred EEEccccCCcHHHHHHHHH
Confidence 3789999999998876533
No 88
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=30.80 E-value=13 Score=27.80 Aligned_cols=19 Identities=11% Similarity=-0.018 Sum_probs=15.8
Q ss_pred CcccccccccCCHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELF 19 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~f 19 (86)
+++||++++.+|+.++...
T Consensus 342 lLVDDvitTG~Tl~~a~~~ 360 (459)
T 1ao0_A 342 VMVDDSIVRGTTSRRIVTM 360 (459)
T ss_dssp EEEESCCSSSHHHHHHHHH
T ss_pred EEEeeeecCHHHHHHHHHH
Confidence 3799999999999887543
No 89
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=30.78 E-value=13 Score=28.23 Aligned_cols=20 Identities=10% Similarity=0.037 Sum_probs=16.0
Q ss_pred CcccccccccCCHHHHHHHH
Q 044500 1 MANDDMYDTYGSLDEVELFT 20 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft 20 (86)
+++||+.|+.+|+.++....
T Consensus 363 llVDDii~TG~Tl~~~~~~L 382 (504)
T 1ecf_A 363 LLVDDSIVRGTTSEQIIEMA 382 (504)
T ss_dssp EEEESCCSSSHHHHHHHHHH
T ss_pred EEEeccccccHHHHHHHHHH
Confidence 37999999999988875443
No 90
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=30.44 E-value=31 Score=25.38 Aligned_cols=21 Identities=14% Similarity=0.409 Sum_probs=17.8
Q ss_pred ccCCHHHHHHHHHHHHhcCcc
Q 044500 9 TYGSLDEVELFTDAVKRWDTG 29 (86)
Q Consensus 9 ~ygT~eEl~~ft~av~RWD~~ 29 (86)
.|||.+|++.|+++..+=.+.
T Consensus 75 ~~Gt~~dfk~Lv~~aH~~Gi~ 95 (549)
T 4aie_A 75 QYGTMADMDELISKAKEHHIK 95 (549)
T ss_dssp TTCCHHHHHHHHHHHHHTTCE
T ss_pred ccCCHHHHHHHHHHHHHCCCE
Confidence 589999999999999876653
No 91
>1we1_A Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A {Synechocystis SP} SCOP: a.132.1.1
Probab=29.78 E-value=74 Score=21.74 Aligned_cols=55 Identities=11% Similarity=0.098 Sum_probs=35.0
Q ss_pred cccccC--CHHHH-HHHHHHHHh--cCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhc
Q 044500 6 MYDTYG--SLDEV-ELFTDAVKR--WDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIH 60 (86)
Q Consensus 6 ~yD~yg--T~eEl-~~ft~av~R--WD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~ 60 (86)
+|+-+| ..++. +.|.+++.+ ||...-+.+=+..+..|..--+.+.+++..+.+.-
T Consensus 155 fy~f~~~~d~~~~k~~fr~~Ld~l~l~~~e~~~ii~eA~~aF~~n~~if~eL~~~~~~~~ 214 (240)
T 1we1_A 155 FYEFADIDDEKAFKNTYRQAMNDLPIDQATAERIVDEANDAFAMNMKMFNELEGNLIKAI 214 (240)
T ss_dssp GGCCTTCSSHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred hcccCCcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466666 45555 457777777 55554455556677777777777887775544433
No 92
>1nh1_A Avirulence B protein; helix bundle, avirulence protein; 2.20A {Pseudomonas syringae} SCOP: e.45.1.1 PDB: 2nud_A 2nun_A*
Probab=29.65 E-value=54 Score=24.08 Aligned_cols=47 Identities=15% Similarity=0.205 Sum_probs=31.9
Q ss_pred HHhc-CccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Q 044500 23 VKRW-DTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVAN 74 (86)
Q Consensus 23 v~RW-D~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~ 74 (86)
+-|| |.+.-+..|+.|+.| +++|+...+++..+..-+ ++-..+.|.+
T Consensus 47 vARWPD~~Nkd~tp~qmeYg-qSfy~~sR~aG~~IA~G~----I~sF~eLW~~ 94 (330)
T 1nh1_A 47 AARWPDDSSKSNTPENRAYC-QSMYNSIRSAGDEISRGG----ITSFEELWGR 94 (330)
T ss_dssp CCCCSSCCCCCCSHHHHHHH-HHHHHHHHHHHHHHHTTS----CCSHHHHHHH
T ss_pred eeccCCccccccCHHHHHHH-HHHHHHHHHhccccccCc----cccHHHHHHH
Confidence 4589 556677899999876 778888888887766522 2234455643
No 93
>2kyg_A CAMP-dependent protein kinase type II-alpha regul subunit; protein/protein, homodimer bound to monomer, protein binding; NMR {Homo sapiens}
Probab=28.50 E-value=69 Score=16.71 Aligned_cols=30 Identities=7% Similarity=-0.126 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHHH
Q 044500 48 FGNDLAYYDLKIHGLNLLSNIKNEVANNVL 77 (86)
Q Consensus 48 ~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ 77 (86)
.++++-.++.+.|-.+++.+..+-+..+.+
T Consensus 18 lL~~~~~evlr~qP~Di~~Faa~yF~~l~~ 47 (50)
T 2kyg_A 18 LLQGYTVEVLRQQPPDLVEFAVEYFTRLRE 47 (50)
T ss_dssp HHHHHHHHHHHHCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 356666778888888998888888776654
No 94
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=28.46 E-value=36 Score=26.38 Aligned_cols=19 Identities=37% Similarity=0.492 Sum_probs=16.6
Q ss_pred ccCCHHHHHHHHHHHHhcC
Q 044500 9 TYGSLDEVELFTDAVKRWD 27 (86)
Q Consensus 9 ~ygT~eEl~~ft~av~RWD 27 (86)
.|||.+|++.|+++..+=.
T Consensus 204 ~~Gt~~dfk~Lv~~aH~~G 222 (599)
T 3bc9_A 204 KYGTKGELENAIDALHNND 222 (599)
T ss_dssp TTBCHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHCC
Confidence 6899999999999988654
No 95
>2ah6_A BH1595, unknown conserved protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bacillus halodurans}
Probab=28.13 E-value=26 Score=24.15 Aligned_cols=19 Identities=26% Similarity=0.459 Sum_probs=15.6
Q ss_pred ccccCCHHHHHHHHHHHHh
Q 044500 7 YDTYGSLDEVELFTDAVKR 25 (86)
Q Consensus 7 yD~ygT~eEl~~ft~av~R 25 (86)
..+|||+|||..++-....
T Consensus 39 IeayGtvDELnS~IGla~~ 57 (208)
T 2ah6_A 39 VVAYGTTDELNSFVGSAIT 57 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred heeeccHHHHHHHHHHHHH
Confidence 6789999999999876543
No 96
>3kat_A Nacht, LRR and PYD domains-containing protein 1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 3.10A {Homo sapiens}
Probab=28.07 E-value=42 Score=20.64 Aligned_cols=40 Identities=13% Similarity=0.057 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHh
Q 044500 13 LDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKI 59 (86)
Q Consensus 13 ~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~ 59 (86)
.+-.+.|.+.|.+|.+.+-+ +++.+|.++-....+++...
T Consensus 63 q~k~R~Lld~v~~kG~~A~~-------~F~~~L~e~dp~L~~~L~~~ 102 (107)
T 3kat_A 63 PSQMRKLFSLSQSWDRKCKD-------GLYQALKETHPHLIMELWEK 102 (107)
T ss_dssp HHHHHHHHHGGGGCCTTHHH-------HHHHHHHHHCHHHHHHHHHC
T ss_pred HHHHHHHHHHhhcCCHHHHH-------HHHHHHHHcCHHHHHHHHhh
Confidence 45566777777887765433 67777776666666665543
No 97
>2q9r_A Protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.91A {Shewanella baltica}
Probab=28.05 E-value=73 Score=21.79 Aligned_cols=39 Identities=13% Similarity=0.044 Sum_probs=23.1
Q ss_pred ccccCCH---HHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHH
Q 044500 7 YDTYGSL---DEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFG 49 (86)
Q Consensus 7 yD~ygT~---eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~ 49 (86)
||.||.. |=+..+..++.-| -+.+|+.+-.+=+.-..|+
T Consensus 87 ~d~yGvyPA~DAc~ALs~~l~~~----~~~~~~~a~~iS~~S~~TV 128 (200)
T 2q9r_A 87 FEAYGVYPAMDAVVAISTLLGAI----QGKIEEDIVNISKLSSSTV 128 (200)
T ss_dssp CCSTTHHHHHHHHHHHHHHHHHH----HHTCHHHHHTHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHHhc----ccchHHHHHHHHHHHHHHH
Confidence 8999965 6677788888876 2335555433333333333
No 98
>2g2d_A ATP:cobalamin adenosyltransferase; helix bundle, trimer, structural genomics, PSI, protein STRU initiative; 2.00A {Mycobacterium tuberculosis}
Probab=27.73 E-value=21 Score=24.24 Aligned_cols=19 Identities=21% Similarity=0.160 Sum_probs=15.4
Q ss_pred cccccCCHHHHHHHHHHHH
Q 044500 6 MYDTYGSLDEVELFTDAVK 24 (86)
Q Consensus 6 ~yD~ygT~eEl~~ft~av~ 24 (86)
-..+|||+|||..++-...
T Consensus 32 rieayGtvDElns~iGla~ 50 (193)
T 2g2d_A 32 RLVAYADCDEANAAIGAAL 50 (193)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hheeechHHHHHHHHHHHH
Confidence 3678999999999986554
No 99
>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1
Probab=27.52 E-value=60 Score=16.55 Aligned_cols=20 Identities=10% Similarity=0.310 Sum_probs=16.1
Q ss_pred CHHHHHHHHHHHH-hcCcccc
Q 044500 12 SLDEVELFTDAVK-RWDTGAM 31 (86)
Q Consensus 12 T~eEl~~ft~av~-RWD~~~~ 31 (86)
|+-|+..|+++++ +|.+++.
T Consensus 14 TvlE~~eLvk~leekfGVsaa 34 (40)
T 1dd4_C 14 TVSELAELVKKLEDKFGVTAA 34 (40)
T ss_dssp CHHHHHHHHHHHHHHTCCCSC
T ss_pred cHHHHHHHHHHHHHHHCCCcc
Confidence 7788888999887 7888753
No 100
>3kkc_A TETR family transcriptional regulator; APC20805, structural genomics, PSI-2, protein structure initiative; 2.50A {Streptococcus agalactiae 2603V}
Probab=26.30 E-value=1.1e+02 Score=18.14 Aligned_cols=19 Identities=16% Similarity=0.406 Sum_probs=12.5
Q ss_pred cccccCCHHHHHHHHHHHHhc
Q 044500 6 MYDTYGSLDEVELFTDAVKRW 26 (86)
Q Consensus 6 ~yD~ygT~eEl~~ft~av~RW 26 (86)
+|-.|+|-++| +..++++.
T Consensus 49 ~Y~~F~sK~~L--~~~~~~~~ 67 (177)
T 3kkc_A 49 FYSHYESKEVL--LKELCEDL 67 (177)
T ss_dssp HTTTCSSTHHH--HHHHHHHH
T ss_pred HHHHcCCHHHH--HHHHHHHH
Confidence 47788888887 44555443
No 101
>2ebi_A DNA binding protein GT-1; DNA-binding domain, phosphorylation; HET: DNA; NMR {Arabidopsis thaliana} PDB: 2jmw_A*
Probab=26.09 E-value=95 Score=17.54 Aligned_cols=60 Identities=7% Similarity=-0.186 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Q 044500 12 SLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGYF 80 (86)
Q Consensus 12 T~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ayl 80 (86)
|.+|...|+++....+..--+..+. -...++|++.+...|-......-+.-|+.|.+.|-
T Consensus 8 t~~Et~~Li~~~~e~~~~f~~~~~~---------~~~W~~Ia~~m~~~G~~rs~~qC~~K~~nL~k~Yk 67 (86)
T 2ebi_A 8 VQDETRSLIMFRRGMDGLFNTSKSN---------KHLWEQISSKMREKGFDRSPDMCTDKWRNLLKEFK 67 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSSCC---------HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHHccccc---------hHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 5678888888776544321111110 12456667666654322334667788999988874
No 102
>1wvt_A Hypothetical protein ST2180; structural genomics, unknown function; 2.30A {Sulfolobus tokodaii}
Probab=25.74 E-value=30 Score=23.01 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=25.6
Q ss_pred ccccCCHHHHHHHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHH
Q 044500 7 YDTYGSLDEVELFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLA 53 (86)
Q Consensus 7 yD~ygT~eEl~~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~ 53 (86)
..+|||+|||..++-....-+ +.+-+.++.+=..|++.-.+++
T Consensus 27 iea~G~vDElns~iGla~~~~----~~~~~~L~~IQ~~Lf~lga~la 69 (172)
T 1wvt_A 27 VKALGDLDELNSVLGVVSSLY----PELSEVIQKLQNDIFSISSEIA 69 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC----GGGHHHHHHHHHHHHHHHHHHT
T ss_pred heehhhHHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHhc
Confidence 578999999999986554311 2233444444445555444444
No 103
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=25.61 E-value=18 Score=24.34 Aligned_cols=27 Identities=30% Similarity=0.299 Sum_probs=20.0
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCccc
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDTGA 30 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~~~ 30 (86)
+++||+.|+.||+... .+.++++....
T Consensus 128 llvDd~l~TG~T~~~a---~~~L~~~G~~~ 154 (209)
T 1i5e_A 128 IIVDPMLATGGSAVAA---IDALKKRGAKS 154 (209)
T ss_dssp EEECSEESSSHHHHHH---HHHHHHTTCCC
T ss_pred EEEcCCCcCHHHHHHH---HHHHHHcCCCE
Confidence 3789999999997766 45666766543
No 104
>3fay_A P195, RAS GTPase-activating-like protein iqgap1; all alpha, calmodulin-binding, cell membrane, membrane, phosphoprotein, membrane protein; 2.20A {Homo sapiens}
Probab=25.59 E-value=99 Score=22.58 Aligned_cols=23 Identities=13% Similarity=0.135 Sum_probs=20.0
Q ss_pred cccCcCchhHHHHHHHHHHHHHH
Q 044500 29 GAMVKLPCYMQICYLAMFNFGND 51 (86)
Q Consensus 29 ~~~~~Lpeymk~~f~~l~~~~~e 51 (86)
+.++.+|..+|.+++.++..+.+
T Consensus 193 ~s~~~~P~~lR~i~~~l~~~~~~ 215 (387)
T 3fay_A 193 SSVDKIPYGMRFIAKVLKDSLHE 215 (387)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHH
Confidence 67889999999999999887654
No 105
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=25.44 E-value=20 Score=24.99 Aligned_cols=24 Identities=17% Similarity=0.187 Sum_probs=18.2
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcC
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWD 27 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD 27 (86)
+|+||+.++.||+.+.. +++++-.
T Consensus 146 liVDDvitTG~T~~~a~---~~l~~~G 169 (238)
T 3n2l_A 146 MLVDDVITAGTAIRESM---ELIQANK 169 (238)
T ss_dssp EEECSCCSSSHHHHHHH---HHHHHTT
T ss_pred EEEeeeecccHHHHHHH---HHHHHcC
Confidence 37899999999988875 4555543
No 106
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=25.32 E-value=44 Score=24.29 Aligned_cols=22 Identities=23% Similarity=0.256 Sum_probs=18.5
Q ss_pred cccCCHHHHHHHHHHHHhcCcc
Q 044500 8 DTYGSLDEVELFTDAVKRWDTG 29 (86)
Q Consensus 8 D~ygT~eEl~~ft~av~RWD~~ 29 (86)
-.|||.+|++.|+++..+=.+.
T Consensus 64 p~~Gt~~df~~lv~~aH~~Gi~ 85 (441)
T 1lwj_A 64 AEYGSEREFKEMIEAFHDSGIK 85 (441)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCE
T ss_pred cccCCHHHHHHHHHHHHHCCCE
Confidence 3589999999999999886653
No 107
>1tff_A Ubiquitin thiolesterase protein OTUB2; hydrolase; 2.10A {Homo sapiens} SCOP: d.3.1.11
Probab=25.15 E-value=1.7e+02 Score=20.00 Aligned_cols=43 Identities=9% Similarity=0.070 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHHhcCcccc-CcCchh-HHHHHHHHHHHHHHHHH
Q 044500 12 SLDEVELFTDAVKRWDTGAM-VKLPCY-MQICYLAMFNFGNDLAY 54 (86)
Q Consensus 12 T~eEl~~ft~av~RWD~~~~-~~Lpey-mk~~f~~l~~~~~ei~~ 54 (86)
+.+|+..|.+.+++|..... -+.|+. .+-++.++.+.++.++.
T Consensus 67 ~~~e~~r~~~~~~~~~~~l~~~g~~~~~~edF~~~f~~ll~~i~~ 111 (234)
T 1tff_A 67 KSREIFKFKERVLQTPNDLLAAGFEEHKFRNFFNAFYSVVELVEK 111 (234)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHhc
Confidence 56899999999999864322 234655 34555666666665543
No 108
>4i0x_A ESAT-6-like protein MAB_3112; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=24.86 E-value=94 Score=17.70 Aligned_cols=34 Identities=12% Similarity=-0.009 Sum_probs=21.2
Q ss_pred HHHHHHHhcCccccCcCchhHHHHHHHHHHHHHHHHHHHHHhcccc
Q 044500 18 LFTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLKIHGLN 63 (86)
Q Consensus 18 ~ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~ 63 (86)
.|.++.++|+.. ...+...+++|+..+..-...|
T Consensus 44 af~~~~~~w~~~------------a~~l~~~L~~i~~~l~~aa~~y 77 (94)
T 4i0x_A 44 AYRSGWDEMQDG------------ATKVWNALTDIASTLGSNAAAF 77 (94)
T ss_dssp HHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHTGGGC
T ss_pred HHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 466666666643 5566667777777766654443
No 109
>1wer_A P120GAP; GTPase activation, RAS, signal transduction, growth regulation, cancer; 1.60A {Homo sapiens} SCOP: a.116.1.2 PDB: 1wq1_G*
Probab=24.84 E-value=91 Score=22.18 Aligned_cols=23 Identities=17% Similarity=0.039 Sum_probs=19.6
Q ss_pred cccCcCchhHHHHHHHHHHHHHH
Q 044500 29 GAMVKLPCYMQICYLAMFNFGND 51 (86)
Q Consensus 29 ~~~~~Lpeymk~~f~~l~~~~~e 51 (86)
++++.+|..+|.+++.++..+.+
T Consensus 148 ~s~~~~P~~lR~i~~~l~~~~~~ 170 (334)
T 1wer_A 148 MASEILPPTLRYIYGCLQKSVQH 170 (334)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHH
Confidence 67889999999999999876654
No 110
>3pt8_A Hemoglobin II; oxygen carrier, oxygen transport; HET: HEM; 1.76A {Lucina pectinata} SCOP: a.1.1.0 PDB: 3pi1_A* 2olp_A* 3pi3_A* 3pi4_A* 3pt7_A* 3pi2_A*
Probab=24.77 E-value=68 Score=19.74 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=25.7
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Q 044500 32 VKLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVL 77 (86)
Q Consensus 32 ~~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ 77 (86)
.--|++.+++-.+|+.++.+ . ....+-++++|.+...
T Consensus 102 gV~p~~f~~~~~~ll~~l~~-g--------~~~t~e~~~AW~~~~~ 138 (152)
T 3pt8_A 102 GIRASDLRTAYDILIHYMED-H--------NHMVGGAKDAWEVFVG 138 (152)
T ss_dssp TCCHHHHHHHHHHHHHHHHH-T--------TCCCTTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH-c--------CcCCHHHHHHHHHHHH
Confidence 33589999999999999888 2 1123456677776554
No 111
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=24.63 E-value=18 Score=26.82 Aligned_cols=25 Identities=20% Similarity=0.302 Sum_probs=19.0
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCc
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDT 28 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~ 28 (86)
+++||+.|+.||+-+.. +++++...
T Consensus 276 iiVDDii~TG~Tl~~a~---~~L~~~Ga 300 (379)
T 2ji4_A 276 IIVDDIIDDVDSFLAAA---ETLKERGA 300 (379)
T ss_dssp EEEEEEECSCHHHHHHH---HHHHHTTC
T ss_pred EEEecCCCchHHHHHHH---HHHHhcCC
Confidence 47999999999987764 45666554
No 112
>3n1e_A Vacuolar protein sorting-associated protein 54; spinal muscular atrophy, vesicle trafficking, golgi apparatu tethering complex, GARP.; 1.70A {Mus musculus} PDB: 3n1b_A
Probab=24.50 E-value=1.5e+02 Score=19.10 Aligned_cols=33 Identities=9% Similarity=0.126 Sum_probs=18.6
Q ss_pred HHHHHHhcCccccCcCchhHHHHHHHHHHHHHHH
Q 044500 19 FTDAVKRWDTGAMVKLPCYMQICYLAMFNFGNDL 52 (86)
Q Consensus 19 ft~av~RWD~~~~~~Lpeymk~~f~~l~~~~~ei 52 (86)
++..++.||..+- --+.||+.+-+.+-..-+-+
T Consensus 36 ~~~~l~~Wd~k~p-vpS~~m~tl~Ke~~kLH~~L 68 (141)
T 3n1e_A 36 FDKLLSKYEVKAP-VPSPCFRNICKQMTKMHEAI 68 (141)
T ss_dssp HHHHHTTCCCCSS-SSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCC-CCCHHHHHHHHHHHHHHHHH
Confidence 4556778886532 23367766665555544443
No 113
>1ash_A Hemoglobin (OXY); oxygen storage; HET: HEM; 2.15A {Ascaris suum} SCOP: a.1.1.2
Probab=24.47 E-value=1.3e+02 Score=19.15 Aligned_cols=42 Identities=7% Similarity=-0.106 Sum_probs=32.3
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Q 044500 33 KLPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLGYFEFF 83 (86)
Q Consensus 33 ~Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~ayl~~~ 83 (86)
--|++.+.+..+++.++.+.- ...+..+++|..+.+.+-.+.
T Consensus 104 V~~e~f~~v~~~Ll~~L~~~l---------~~t~~~~~AW~~l~~~~~~~~ 145 (150)
T 1ash_A 104 MPPEVWTDFWKLFEEYLGKKT---------TLDEPTKQAWHEIGREFAKEI 145 (150)
T ss_dssp CCHHHHHHHHHHHHHHHHHHS---------CCCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHc---------CCCHHHHHHHHHHHHHHHHHH
Confidence 458889999999988877752 234678899999998887665
No 114
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=24.03 E-value=15 Score=30.54 Aligned_cols=34 Identities=26% Similarity=0.462 Sum_probs=26.0
Q ss_pred HHHHhcCccccCc-CchhHHHHHHHHHHHHHHHHH
Q 044500 21 DAVKRWDTGAMVK-LPCYMQICYLAMFNFGNDLAY 54 (86)
Q Consensus 21 ~av~RWD~~~~~~-Lpeymk~~f~~l~~~~~ei~~ 54 (86)
+|++||+++.++. ||.++.|++.--....+++..
T Consensus 410 ealE~wpv~l~~~lLpr~~~II~ein~~f~~~~~~ 444 (879)
T 1ygp_A 410 EALEKWPRRLFGHLLPRHLEIIYDINWFFLEDVAK 444 (879)
T ss_dssp GGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhccCCHHHHHHHCCcHHHHHHHHHHHHHHHHHH
Confidence 4668899998887 899999998876665555443
No 115
>3mzy_A RNA polymerase sigma-H factor; PSI, MCSG, structural genomics, midwest center for structura genomics, protein structure initiative; 2.50A {Fusobacterium nucleatum subsp}
Probab=23.55 E-value=1.2e+02 Score=17.83 Aligned_cols=28 Identities=7% Similarity=-0.113 Sum_probs=20.7
Q ss_pred ccC-cCchhHHHHHHHHHH---HHHHHHHHHHH
Q 044500 30 AMV-KLPCYMQICYLAMFN---FGNDLAYYDLK 58 (86)
Q Consensus 30 ~~~-~Lpeymk~~f~~l~~---~~~ei~~~~~~ 58 (86)
++. .||+.-+.++. .+- ++.||++.+..
T Consensus 105 ~l~~~L~~~~r~v~~-~~~~g~s~~EIA~~lgi 136 (164)
T 3mzy_A 105 FSENNFSKFEKEVLT-YLIRGYSYREIATILSK 136 (164)
T ss_dssp HHHHHSCHHHHHHHH-HHTTTCCHHHHHHHHTC
T ss_pred HHHhhCCHHHHHHHH-HHHcCCCHHHHHHHHCC
Confidence 455 79999998888 433 58999888654
No 116
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=23.43 E-value=53 Score=24.18 Aligned_cols=22 Identities=18% Similarity=0.442 Sum_probs=18.7
Q ss_pred cccCCHHHHHHHHHHHHhcCcc
Q 044500 8 DTYGSLDEVELFTDAVKRWDTG 29 (86)
Q Consensus 8 D~ygT~eEl~~ft~av~RWD~~ 29 (86)
-.|||.+|++.|+++..+=.+.
T Consensus 76 p~~Gt~~d~~~Lv~~aH~~Gi~ 97 (488)
T 1wza_A 76 PDYGTLEDFHKLVEAAHQRGIK 97 (488)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCE
T ss_pred cccCCHHHHHHHHHHHHHCCCE
Confidence 3589999999999999887664
No 117
>1rty_A YVQK protein; all alpha-helical trimeric protein, structural genomics, PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: a.25.2.2
Probab=23.08 E-value=26 Score=23.79 Aligned_cols=18 Identities=28% Similarity=0.630 Sum_probs=15.0
Q ss_pred ccccCCHHHHHHHHHHHH
Q 044500 7 YDTYGSLDEVELFTDAVK 24 (86)
Q Consensus 7 yD~ygT~eEl~~ft~av~ 24 (86)
..+|||+|||..++-...
T Consensus 27 ieayGtvDElns~iGla~ 44 (193)
T 1rty_A 27 VESYGTIDELNSFIGLAL 44 (193)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hheeccHHHHHHHHHHHH
Confidence 678999999999987554
No 118
>3ke4_A Hypothetical cytosolic protein; helix bundle, transferase; 1.90A {Bacillus cereus} PDB: 3ke5_A*
Probab=22.99 E-value=32 Score=23.79 Aligned_cols=19 Identities=21% Similarity=0.392 Sum_probs=15.8
Q ss_pred cccccCCHHHHHHHHHHHH
Q 044500 6 MYDTYGSLDEVELFTDAVK 24 (86)
Q Consensus 6 ~yD~ygT~eEl~~ft~av~ 24 (86)
-..+|||+|||..++-.+.
T Consensus 46 RveayGtvDELnS~IGla~ 64 (213)
T 3ke4_A 46 RVEAYGTIDEANSHIGYAM 64 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHH
Confidence 3678999999999987664
No 119
>2ns6_A Mobilization protein A; nickase, 5-strand antiparallel beta sheet, metalloenzyme, hydrolase; 2.10A {Pseudomonas aeruginosa}
Probab=22.91 E-value=72 Score=21.21 Aligned_cols=23 Identities=13% Similarity=0.008 Sum_probs=19.6
Q ss_pred cccHHHHHHHHHHHHHHHHHHHH
Q 044500 61 GLNLLSNIKNEVANNVLGYFEFF 83 (86)
Q Consensus 61 ~~~~~~~lk~~~~~l~~ayl~~~ 83 (86)
++..+...|+.|.+++..+|..+
T Consensus 161 ~k~~l~~~R~~Wa~~~N~~Le~~ 183 (185)
T 2ns6_A 161 PKAWLEQTREAWADHANRALERA 183 (185)
T ss_dssp STTHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHc
Confidence 45668899999999999999865
No 120
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=22.86 E-value=51 Score=24.11 Aligned_cols=19 Identities=5% Similarity=-0.083 Sum_probs=16.6
Q ss_pred ccCCHHHHHHHHHHHHhcC
Q 044500 9 TYGSLDEVELFTDAVKRWD 27 (86)
Q Consensus 9 ~ygT~eEl~~ft~av~RWD 27 (86)
.|||.+|++.|+++..+=.
T Consensus 60 ~~Gt~~dfk~Lv~~aH~~G 78 (448)
T 1g94_A 60 RGGNRAQFIDMVNRCSAAG 78 (448)
T ss_dssp TTBCHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHCC
Confidence 5899999999999988744
No 121
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=22.53 E-value=54 Score=23.65 Aligned_cols=18 Identities=22% Similarity=0.449 Sum_probs=15.5
Q ss_pred cccCCHHHHHHHHHHHHh
Q 044500 8 DTYGSLDEVELFTDAVKR 25 (86)
Q Consensus 8 D~ygT~eEl~~ft~av~R 25 (86)
-.|||.+|++.|+++..+
T Consensus 63 ~~~Gt~~d~~~lv~~~h~ 80 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHG 80 (405)
T ss_dssp CTTCCHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHH
Confidence 467999999999999765
No 122
>2o8x_A Probable RNA polymerase sigma-C factor; promoter recognition, transcription regulation, helix-turn-H motif, transcription; 3.00A {Mycobacterium tuberculosis}
Probab=22.15 E-value=92 Score=15.98 Aligned_cols=45 Identities=11% Similarity=-0.190 Sum_probs=27.0
Q ss_pred ccCcCchhHHHHHHHHH-H--HHHHHHHHHHHhccccHHHHHHHHHHHH
Q 044500 30 AMVKLPCYMQICYLAMF-N--FGNDLAYYDLKIHGLNLLSNIKNEVANN 75 (86)
Q Consensus 30 ~~~~Lpeymk~~f~~l~-~--~~~ei~~~~~~~~~~~~~~~lk~~~~~l 75 (86)
+++.||+.-+-++...+ . +.+||++.+... .+.+-.++..+.+.+
T Consensus 12 ~l~~L~~~~r~il~l~~~~g~s~~eIA~~lgis-~~tv~~~~~ra~~~l 59 (70)
T 2o8x_A 12 MIADLTTDQREALLLTQLLGLSYADAAAVCGCP-VGTIRSRVARARDAL 59 (70)
T ss_dssp TTTSSCHHHHHHHHHHHTSCCCHHHHHHHHTSC-HHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHcCCCHHHHHHHHCcC-HHHHHHHHHHHHHHH
Confidence 45678888887776653 2 688998886442 223334444444444
No 123
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=22.04 E-value=60 Score=23.73 Aligned_cols=21 Identities=5% Similarity=0.134 Sum_probs=18.4
Q ss_pred ccCCHHHHHHHHHHHHhcCcc
Q 044500 9 TYGSLDEVELFTDAVKRWDTG 29 (86)
Q Consensus 9 ~ygT~eEl~~ft~av~RWD~~ 29 (86)
.|||.+|++.|+++..+=.+.
T Consensus 92 ~~Gt~~df~~lv~~~h~~Gi~ 112 (475)
T 2z1k_A 92 ILGGNEALRHLLEVAHAHGVR 112 (475)
T ss_dssp GGTCHHHHHHHHHHHHHTTCE
T ss_pred ccCCHHHHHHHHHHHHHCCCE
Confidence 689999999999999987664
No 124
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=21.63 E-value=20 Score=23.63 Aligned_cols=26 Identities=19% Similarity=0.190 Sum_probs=17.9
Q ss_pred CcccccccccCCHHHHHHHHHHHHhcCcc
Q 044500 1 MANDDMYDTYGSLDEVELFTDAVKRWDTG 29 (86)
Q Consensus 1 tv~DD~yD~ygT~eEl~~ft~av~RWD~~ 29 (86)
+++||+.|+.-|+..+. +++..-.+.
T Consensus 99 llVDDIldTG~Tl~~~~---~~l~~~~p~ 124 (181)
T 3acd_A 99 IVVEDIVDTGLTLSYLL---DYLEARKPA 124 (181)
T ss_dssp EEEEEEESSSHHHHHHH---HHHHTTCCS
T ss_pred EEEEEEEcCchhHHHHH---HHHhcCCCC
Confidence 37899999999976654 455544443
No 125
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=21.32 E-value=59 Score=23.83 Aligned_cols=20 Identities=20% Similarity=0.526 Sum_probs=17.0
Q ss_pred ccCCHHHHHHHHHHHHhcCc
Q 044500 9 TYGSLDEVELFTDAVKRWDT 28 (86)
Q Consensus 9 ~ygT~eEl~~ft~av~RWD~ 28 (86)
.|||.+|++.|+++..+=.+
T Consensus 93 ~~Gt~~df~~lv~~~H~~Gi 112 (478)
T 2guy_A 93 NYGTADDLKALSSALHERGM 112 (478)
T ss_dssp TSCCHHHHHHHHHHHHHTTC
T ss_pred cCCCHHHHHHHHHHHHHCCC
Confidence 57999999999999887554
No 126
>1bin_A Leghemoglobin A; heme, nitrogen fixation, multigene family, oxygen transport; HET: HEM; 2.20A {Glycine max} SCOP: a.1.1.2 PDB: 1fsl_A*
Probab=21.18 E-value=1.4e+02 Score=17.72 Aligned_cols=38 Identities=5% Similarity=-0.116 Sum_probs=26.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Q 044500 34 LPCYMQICYLAMFNFGNDLAYYDLKIHGLNLLSNIKNEVANNVLG 78 (86)
Q Consensus 34 Lpeymk~~f~~l~~~~~ei~~~~~~~~~~~~~~~lk~~~~~l~~a 78 (86)
-|++.+++...|+.++.+.- |....+-++++|.+....
T Consensus 98 ~p~~f~~~~~~Ll~~l~~~l-------g~~~t~e~~~AW~~~~~~ 135 (143)
T 1bin_A 98 TDPQFVVVKEALLKTIKAAV-------GDKWSDELSRAWEVAYDE 135 (143)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-------GGGCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHh-------cccCCHHHHHHHHHHHHH
Confidence 48899999999998886622 223456677888876654
No 127
>2xb0_X Chromo domain-containing protein 1; hydrolase, DNA-binding protein, transcription, chromatin REG; HET: GOL; 2.00A {Saccharomyces cerevisiae} PDB: 3ted_A
Probab=21.14 E-value=2.2e+02 Score=20.07 Aligned_cols=43 Identities=19% Similarity=0.098 Sum_probs=30.1
Q ss_pred CHHHHHHHHHHHHhcCc------------cccCcCchhHHHHHHHHHHHHHHHHH
Q 044500 12 SLDEVELFTDAVKRWDT------------GAMVKLPCYMQICYLAMFNFGNDLAY 54 (86)
Q Consensus 12 T~eEl~~ft~av~RWD~------------~~~~~Lpeymk~~f~~l~~~~~ei~~ 54 (86)
|-.|++.|..|+.||-. +..+.=++.++-++..|.+...+.-+
T Consensus 7 tekEiR~l~Ra~~kfG~~~~R~e~I~~dA~L~~ks~~~i~~~~~~li~~c~~av~ 61 (270)
T 2xb0_X 7 GESEVRALYKAILKFGNLKEILDELIADGTLPVKSFEKYGETYDEMMEAAKDCVH 61 (270)
T ss_dssp CHHHHHHHHHHHHHHSSCTTCHHHHHHTTSSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999987741 11233457788888888887666543
No 128
>1bgf_A STAT-4; transcription factor, regulation, DNA-binding; 1.45A {Mus musculus} SCOP: a.90.1.1
Probab=21.10 E-value=1.6e+02 Score=18.38 Aligned_cols=53 Identities=13% Similarity=0.159 Sum_probs=34.7
Q ss_pred cccccccCCHHHHHHHHHHHH--hcCccccCcCchhHHHHHHHHHHHHHHHHHHHHH
Q 044500 4 DDMYDTYGSLDEVELFTDAVK--RWDTGAMVKLPCYMQICYLAMFNFGNDLAYYDLK 58 (86)
Q Consensus 4 DD~yD~ygT~eEl~~ft~av~--RWD~~~~~~Lpeymk~~f~~l~~~~~ei~~~~~~ 58 (86)
+-+||..-.+|==+-|.+.|| .||..+-+ -.....+|..+++.++...+....
T Consensus 20 ~~LY~~~FPiEvRhyLA~WIE~q~W~~~~~~--e~~A~~l~~~Ll~eL~~~~~~~~~ 74 (124)
T 1bgf_A 20 DQFYDDNFPMEIRHLLAQWIETQDWEVASNN--ETMATILLQNLLIQLDEQLGRVSK 74 (124)
T ss_dssp GGGCBTTBCHHHHHHTHHHHHHSCHHHHTTC--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcccCCHHHHHHHHHHHHhcccccccch--HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 446776656765666788888 78843311 346668888888877776655443
No 129
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=21.06 E-value=1.2e+02 Score=17.44 Aligned_cols=34 Identities=18% Similarity=0.168 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHhcCccccCcCc-hhHHHHHHHH
Q 044500 12 SLDEVELFTDAVKRWDTGAMVKLP-CYMQICYLAM 45 (86)
Q Consensus 12 T~eEl~~ft~av~RWD~~~~~~Lp-eymk~~f~~l 45 (86)
|-++.+.+-+|++..|.+.-..++ +.++.+++.+
T Consensus 31 ~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~l 65 (100)
T 2lv7_A 31 PEDELEEIREAFKVFDRDGNGFISKQELGTAMRSL 65 (100)
T ss_dssp CGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHh
Confidence 567778888999999998777774 6676666554
No 130
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=21.05 E-value=1.4e+02 Score=18.16 Aligned_cols=34 Identities=9% Similarity=0.031 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhcCccccCcCc-hhHHHHHHHH
Q 044500 12 SLDEVELFTDAVKRWDTGAMVKLP-CYMQICYLAM 45 (86)
Q Consensus 12 T~eEl~~ft~av~RWD~~~~~~Lp-eymk~~f~~l 45 (86)
|.++++.|-+|++..|.+.-..++ +.++.+++++
T Consensus 11 t~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~l 45 (153)
T 3i5g_B 11 SQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSL 45 (153)
T ss_dssp CHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHc
Confidence 778888889999998887766664 6676666655
No 131
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=21.05 E-value=59 Score=24.40 Aligned_cols=19 Identities=21% Similarity=0.209 Sum_probs=16.5
Q ss_pred cccCCHHHHHHHHHHHHhc
Q 044500 8 DTYGSLDEVELFTDAVKRW 26 (86)
Q Consensus 8 D~ygT~eEl~~ft~av~RW 26 (86)
-.|||.+|++.|+++..+=
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~ 105 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGA 105 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHC
Confidence 4689999999999998873
No 132
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=20.93 E-value=66 Score=23.64 Aligned_cols=20 Identities=20% Similarity=0.489 Sum_probs=17.5
Q ss_pred ccCCHHHHHHHHHHHHhcCc
Q 044500 9 TYGSLDEVELFTDAVKRWDT 28 (86)
Q Consensus 9 ~ygT~eEl~~ft~av~RWD~ 28 (86)
.|||.+|++.|+++..+=.+
T Consensus 93 ~~Gt~~df~~lv~~~H~~Gi 112 (484)
T 2aaa_A 93 NFGTADNLKSLSDALHARGM 112 (484)
T ss_dssp TTCCHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHHHHHHHHHHCCC
Confidence 58999999999999998654
No 133
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=20.80 E-value=62 Score=23.66 Aligned_cols=19 Identities=16% Similarity=0.401 Sum_probs=16.1
Q ss_pred ccCCHHHHHHHHHHHHhcC
Q 044500 9 TYGSLDEVELFTDAVKRWD 27 (86)
Q Consensus 9 ~ygT~eEl~~ft~av~RWD 27 (86)
.|||.+|++.|+++..+=.
T Consensus 82 ~~Gt~~df~~lv~~~H~~G 100 (435)
T 1mxg_A 82 RFGSKEELVRLIQTAHAYG 100 (435)
T ss_dssp SSCCHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHCC
Confidence 5899999999999987643
No 134
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=20.62 E-value=60 Score=23.74 Aligned_cols=21 Identities=14% Similarity=0.359 Sum_probs=17.8
Q ss_pred ccCCHHHHHHHHHHHHhcCcc
Q 044500 9 TYGSLDEVELFTDAVKRWDTG 29 (86)
Q Consensus 9 ~ygT~eEl~~ft~av~RWD~~ 29 (86)
.|||.++++.|+++..+=.+.
T Consensus 77 ~~Gt~~d~~~lv~~ah~~Gi~ 97 (424)
T 2dh2_A 77 NFGSKEDFDSLLQSAKKKSIR 97 (424)
T ss_dssp GGCCHHHHHHHHHHHHHTTCE
T ss_pred cCCCHHHHHHHHHHHHHCCCE
Confidence 589999999999998876653
No 135
>3fav_B ESAT-6, 6 kDa early secretory antigenic target; complex, operon structure, four-helical-bundle, coiled-coil, WXG-motif, secreted; 2.15A {Mycobacterium tuberculosis} SCOP: a.25.3.1 PDB: 1wa8_B
Probab=20.19 E-value=1.2e+02 Score=16.87 Aligned_cols=18 Identities=17% Similarity=-0.119 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 044500 42 YLAMFNFGNDLAYYDLKI 59 (86)
Q Consensus 42 f~~l~~~~~ei~~~~~~~ 59 (86)
+..+...+++|+..+..-
T Consensus 61 ~~~~~~~L~~i~~~l~~~ 78 (94)
T 3fav_B 61 ATELNNALQNLARTISEA 78 (94)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 444444555555554443
Done!