Query 044502
Match_columns 262
No_of_seqs 124 out of 437
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 06:12:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044502.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044502hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uzd_A 14-3-3 protein gamma; s 100.0 3.2E-97 1E-101 661.4 24.5 237 7-243 3-241 (248)
2 3ubw_A 14-3-3E, 14-3-3 protein 100.0 4.9E-97 2E-101 662.9 24.8 237 1-238 25-261 (261)
3 3iqu_A 14-3-3 protein sigma; s 100.0 1.2E-96 4E-101 654.1 22.6 230 7-236 7-236 (236)
4 1o9d_A 14-3-3-like protein C; 100.0 2.8E-96 1E-100 660.2 24.1 245 1-245 1-247 (260)
5 2br9_A 14-3-3E, 14-3-3 protein 100.0 4.2E-94 1.4E-98 638.4 24.7 234 3-237 1-234 (234)
6 2npm_A 14-3-3 domain containin 100.0 1.5E-93 5.2E-98 642.0 24.3 233 5-238 25-260 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 9E-90 3.1E-94 617.4 15.9 227 7-241 28-261 (268)
8 2o8p_A 14-3-3 domain containin 100.0 2.5E-81 8.7E-86 551.8 20.4 215 7-233 2-226 (227)
9 3edt_B KLC 2, kinesin light ch 95.3 0.25 8.6E-06 40.3 12.0 58 150-208 144-201 (283)
10 3vtx_A MAMA; tetratricopeptide 94.9 1 3.5E-05 35.0 17.2 160 10-204 7-169 (184)
11 3nf1_A KLC 1, kinesin light ch 94.7 1.6 5.4E-05 36.1 19.3 185 9-208 28-227 (311)
12 3n71_A Histone lysine methyltr 93.3 0.91 3.1E-05 43.4 12.5 100 95-208 326-425 (490)
13 2qfc_A PLCR protein; TPR, HTH, 92.7 4.2 0.00014 34.5 15.9 72 122-206 154-226 (293)
14 3u3w_A Transcriptional activat 92.5 4.4 0.00015 34.3 17.5 57 150-208 172-228 (293)
15 3u4t_A TPR repeat-containing p 92.2 3.9 0.00013 33.3 13.6 53 151-204 197-249 (272)
16 4g1t_A Interferon-induced prot 92.0 4.2 0.00014 36.3 14.5 49 150-203 351-399 (472)
17 4i17_A Hypothetical protein; T 91.9 4.1 0.00014 32.7 13.2 60 9-69 8-67 (228)
18 3qww_A SET and MYND domain-con 91.8 0.77 2.6E-05 43.2 9.7 100 95-208 315-414 (433)
19 3ro2_A PINS homolog, G-protein 91.6 5 0.00017 33.0 19.1 190 9-208 6-215 (338)
20 3qwp_A SET and MYND domain-con 91.3 0.31 1.1E-05 45.7 6.3 58 150-208 346-403 (429)
21 3edt_B KLC 2, kinesin light ch 90.7 1.1 3.8E-05 36.3 8.5 57 150-207 102-158 (283)
22 4abn_A Tetratricopeptide repea 90.5 11 0.00037 34.9 16.3 173 9-204 103-286 (474)
23 3fp2_A TPR repeat-containing p 90.4 9.7 0.00033 34.3 16.6 49 149-206 444-492 (537)
24 1fch_A Peroxisomal targeting s 90.0 8.1 0.00028 32.8 14.3 58 9-68 99-156 (368)
25 3qww_A SET and MYND domain-con 89.9 1.2 4.1E-05 41.8 9.1 59 150-209 315-373 (433)
26 3hym_B Cell division cycle pro 89.6 7.9 0.00027 32.0 15.4 45 150-203 253-297 (330)
27 3ro2_A PINS homolog, G-protein 89.1 8.2 0.00028 31.6 15.4 55 150-207 200-254 (338)
28 3ulq_A Response regulator aspa 89.1 3.2 0.00011 36.4 10.8 72 122-207 102-174 (383)
29 3n71_A Histone lysine methyltr 89.0 1.5 5E-05 41.9 9.0 59 150-209 326-384 (490)
30 4a1s_A PINS, partner of inscut 89.0 11 0.00037 32.8 21.9 191 9-208 49-255 (411)
31 3ieg_A DNAJ homolog subfamily 88.0 11 0.00036 31.5 16.9 46 150-204 289-334 (359)
32 3ulq_A Response regulator aspa 87.8 13 0.00045 32.3 15.6 174 14-207 109-295 (383)
33 4eqf_A PEX5-related protein; a 87.5 13 0.00044 31.8 16.5 59 9-69 66-124 (365)
34 2gw1_A Mitochondrial precursor 87.4 15 0.00052 32.6 14.7 55 149-204 205-265 (514)
35 2pl2_A Hypothetical conserved 87.1 9 0.00031 30.9 11.7 44 9-53 6-49 (217)
36 3qky_A Outer membrane assembly 87.1 11 0.00039 30.8 15.5 64 8-72 15-80 (261)
37 3qwp_A SET and MYND domain-con 86.7 0.64 2.2E-05 43.5 4.9 58 150-208 304-361 (429)
38 4gcn_A Protein STI-1; structur 86.6 1.7 5.7E-05 32.6 6.4 48 150-206 25-72 (127)
39 3sf4_A G-protein-signaling mod 85.6 16 0.00055 31.1 21.9 192 7-207 8-218 (406)
40 3q15_A PSP28, response regulat 84.7 4.7 0.00016 35.4 9.4 74 121-207 99-172 (378)
41 2q7f_A YRRB protein; TPR, prot 84.6 13 0.00045 29.2 16.5 59 9-69 58-116 (243)
42 4gyw_A UDP-N-acetylglucosamine 84.0 17 0.00059 36.1 14.1 45 8-53 9-53 (723)
43 3ro3_A PINS homolog, G-protein 84.0 9.8 0.00034 27.4 13.0 54 150-206 106-159 (164)
44 3hym_B Cell division cycle pro 83.2 18 0.00061 29.8 15.5 55 150-205 210-265 (330)
45 3cv0_A Peroxisome targeting si 82.5 19 0.00065 29.6 15.1 58 9-68 22-79 (327)
46 2xpi_A Anaphase-promoting comp 82.4 29 0.001 31.7 18.3 47 149-204 532-578 (597)
47 3sf4_A G-protein-signaling mod 82.3 22 0.00077 30.2 18.5 28 10-37 49-76 (406)
48 4a1s_A PINS, partner of inscut 82.2 24 0.00081 30.5 16.7 28 10-37 88-115 (411)
49 3uq3_A Heat shock protein STI1 81.7 17 0.0006 28.6 14.1 32 9-40 80-111 (258)
50 2y4t_A DNAJ homolog subfamily 81.5 27 0.00091 30.5 15.9 57 11-69 146-202 (450)
51 2y4t_A DNAJ homolog subfamily 81.2 27 0.00093 30.5 14.8 169 9-204 178-357 (450)
52 2gw1_A Mitochondrial precursor 80.1 31 0.0011 30.5 15.2 171 10-205 306-478 (514)
53 3fp2_A TPR repeat-containing p 79.4 34 0.0012 30.6 17.6 59 9-69 26-84 (537)
54 3rkv_A Putative peptidylprolyl 79.1 2.2 7.4E-05 32.7 4.4 54 150-204 28-91 (162)
55 4gco_A Protein STI-1; structur 78.2 5.5 0.00019 29.6 6.4 46 150-204 30-75 (126)
56 4b4t_Q 26S proteasome regulato 78.2 34 0.0012 29.8 17.4 180 11-208 58-248 (434)
57 2ho1_A Type 4 fimbrial biogene 78.0 24 0.00083 28.0 15.1 165 9-204 38-203 (252)
58 2xpi_A Anaphase-promoting comp 77.5 42 0.0014 30.6 19.2 55 149-205 491-545 (597)
59 3u3w_A Transcriptional activat 77.3 11 0.00036 31.9 8.7 53 150-206 132-185 (293)
60 1fch_A Peroxisomal targeting s 77.0 32 0.0011 28.9 18.6 58 9-68 65-122 (368)
61 3ieg_A DNAJ homolog subfamily 76.3 32 0.0011 28.5 17.9 168 12-205 124-301 (359)
62 1elr_A TPR2A-domain of HOP; HO 75.7 12 0.00041 26.0 7.4 53 150-204 55-107 (131)
63 1qqe_A Vesicular transport pro 74.9 34 0.0012 28.8 11.3 51 150-204 135-186 (292)
64 3ro3_A PINS homolog, G-protein 74.9 10 0.00036 27.2 7.0 56 150-208 66-121 (164)
65 4eqf_A PEX5-related protein; a 74.9 38 0.0013 28.7 16.4 58 9-68 100-157 (365)
66 3lf9_A 4E10_D0_1IS1A_001_C (T1 74.5 12 0.00042 29.2 7.4 86 22-112 11-103 (121)
67 1xnf_A Lipoprotein NLPI; TPR, 74.3 31 0.0011 27.5 12.0 56 10-67 45-100 (275)
68 2ifu_A Gamma-SNAP; membrane fu 73.0 26 0.00088 29.8 10.1 51 150-203 172-222 (307)
69 2vq2_A PILW, putative fimbrial 72.7 30 0.001 26.5 16.3 167 9-205 9-176 (225)
70 4g1t_A Interferon-induced prot 72.5 6.4 0.00022 35.1 6.3 53 150-203 68-121 (472)
71 3q15_A PSP28, response regulat 71.9 49 0.0017 28.6 18.3 53 150-206 239-291 (378)
72 4gcn_A Protein STI-1; structur 71.7 8.4 0.00029 28.5 5.9 52 150-203 59-110 (127)
73 2pl2_A Hypothetical conserved 71.5 37 0.0013 27.1 17.2 45 9-54 40-84 (217)
74 3cv0_A Peroxisome targeting si 71.5 40 0.0014 27.5 14.2 59 9-69 56-114 (327)
75 2l6j_A TPR repeat-containing p 71.3 11 0.00039 25.8 6.2 45 150-203 21-65 (111)
76 3uq3_A Heat shock protein STI1 71.1 35 0.0012 26.7 17.8 43 9-53 6-48 (258)
77 2qfc_A PLCR protein; TPR, HTH, 69.7 15 0.00051 30.9 7.7 190 9-220 76-277 (293)
78 2ifu_A Gamma-SNAP; membrane fu 69.2 52 0.0018 27.8 11.8 53 150-206 132-185 (307)
79 1na3_A Designed protein CTPR2; 69.1 16 0.00054 24.0 6.4 46 150-204 26-71 (91)
80 3gw4_A Uncharacterized protein 68.6 12 0.00041 28.7 6.4 74 121-206 64-137 (203)
81 3k9i_A BH0479 protein; putativ 68.5 14 0.00048 26.4 6.4 47 150-205 44-90 (117)
82 4gyw_A UDP-N-acetylglucosamine 68.3 75 0.0026 31.5 13.5 136 9-210 44-179 (723)
83 2e2e_A Formate-dependent nitri 66.9 39 0.0013 25.5 11.6 46 150-204 98-143 (177)
84 2kck_A TPR repeat; tetratricop 66.6 18 0.00061 24.3 6.4 46 150-204 23-68 (112)
85 3ma5_A Tetratricopeptide repea 66.5 30 0.001 24.1 9.4 72 150-236 24-95 (100)
86 2q7f_A YRRB protein; TPR, prot 66.3 44 0.0015 26.0 11.7 59 9-69 24-82 (243)
87 3sz7_A HSC70 cochaperone (SGT) 65.9 27 0.00091 26.3 7.9 47 150-205 62-108 (164)
88 2xev_A YBGF; tetratricopeptide 65.6 22 0.00075 25.0 7.0 49 150-204 56-104 (129)
89 1hz4_A MALT regulatory protein 65.6 14 0.00049 31.7 6.9 55 150-205 110-164 (373)
90 3qky_A Outer membrane assembly 65.5 53 0.0018 26.6 15.9 50 149-204 113-176 (261)
91 2kc7_A BFR218_protein; tetratr 64.6 22 0.00074 24.1 6.5 47 150-204 17-63 (99)
92 1p5q_A FKBP52, FK506-binding p 64.1 57 0.0019 28.3 10.6 32 10-41 149-180 (336)
93 3nf1_A KLC 1, kinesin light ch 63.3 58 0.002 26.3 19.5 28 10-37 71-98 (311)
94 2hr2_A Hypothetical protein; a 63.2 22 0.00076 28.7 7.1 53 150-204 28-85 (159)
95 1w3b_A UDP-N-acetylglucosamine 62.8 73 0.0025 27.2 14.5 32 10-41 69-100 (388)
96 2dba_A Smooth muscle cell asso 62.4 14 0.00049 26.5 5.4 49 150-204 45-93 (148)
97 2yhc_A BAMD, UPF0169 lipoprote 62.0 59 0.002 25.9 18.6 62 9-71 5-68 (225)
98 3as5_A MAMA; tetratricopeptide 61.5 45 0.0015 24.4 15.1 164 9-206 9-174 (186)
99 3upv_A Heat shock protein STI1 61.2 23 0.00079 25.2 6.4 46 150-204 21-66 (126)
100 3u4t_A TPR repeat-containing p 60.9 62 0.0021 25.8 11.5 48 150-206 159-209 (272)
101 4gco_A Protein STI-1; structur 60.7 23 0.00078 26.1 6.4 46 150-204 64-109 (126)
102 2xcb_A PCRH, regulatory protei 59.0 50 0.0017 24.2 8.5 48 150-206 69-116 (142)
103 2lni_A Stress-induced-phosphop 58.9 28 0.00095 24.2 6.4 47 150-205 67-113 (133)
104 3q49_B STIP1 homology and U bo 57.7 29 0.00098 24.7 6.4 15 189-203 56-70 (137)
105 1lyp_A CAP18; lipopolysacchari 57.7 21 0.00073 20.8 4.3 26 84-109 4-29 (32)
106 2fbn_A 70 kDa peptidylprolyl i 57.0 65 0.0022 24.9 11.8 32 9-40 39-70 (198)
107 3vtx_A MAMA; tetratricopeptide 56.7 27 0.00092 26.5 6.4 46 150-204 22-67 (184)
108 3upv_A Heat shock protein STI1 56.6 31 0.0011 24.5 6.4 48 150-206 55-102 (126)
109 3ma5_A Tetratricopeptide repea 56.6 46 0.0016 23.0 10.5 57 9-67 8-64 (100)
110 2kat_A Uncharacterized protein 55.3 40 0.0014 23.5 6.7 49 150-207 36-84 (115)
111 2vgx_A Chaperone SYCD; alterna 54.8 30 0.001 26.1 6.3 47 150-205 72-118 (148)
112 3gw4_A Uncharacterized protein 54.3 67 0.0023 24.2 14.6 56 150-208 124-179 (203)
113 2kat_A Uncharacterized protein 53.0 55 0.0019 22.8 11.8 58 9-68 20-77 (115)
114 1elw_A TPR1-domain of HOP; HOP 52.9 34 0.0012 23.0 5.9 45 150-203 55-99 (118)
115 2vyi_A SGTA protein; chaperone 52.3 42 0.0014 22.9 6.4 16 189-204 59-74 (131)
116 2ho1_A Type 4 fimbrial biogene 52.0 85 0.0029 24.7 16.5 61 9-71 72-132 (252)
117 1elw_A TPR1-domain of HOP; HOP 52.0 45 0.0015 22.3 6.4 47 150-205 21-67 (118)
118 4ga2_A E3 SUMO-protein ligase 51.7 40 0.0014 25.3 6.6 32 10-41 33-64 (150)
119 2vyi_A SGTA protein; chaperone 51.7 44 0.0015 22.8 6.4 47 150-205 63-109 (131)
120 3bee_A Putative YFRE protein; 51.5 17 0.00057 26.1 4.1 31 10-40 45-75 (93)
121 1qqe_A Vesicular transport pro 51.4 30 0.001 29.1 6.4 53 150-205 54-106 (292)
122 1xnf_A Lipoprotein NLPI; TPR, 51.4 79 0.0027 25.0 8.7 47 149-204 93-139 (275)
123 3gyz_A Chaperone protein IPGC; 50.7 36 0.0012 26.3 6.2 46 150-204 87-132 (151)
124 1a17_A Serine/threonine protei 50.7 41 0.0014 24.4 6.4 47 150-205 64-110 (166)
125 4gfq_A Ribosome-recycling fact 50.3 29 0.00098 29.6 5.9 69 39-112 127-199 (209)
126 4ga2_A E3 SUMO-protein ligase 49.6 42 0.0014 25.2 6.4 46 150-204 48-93 (150)
127 2dba_A Smooth muscle cell asso 49.5 46 0.0016 23.6 6.4 46 150-204 82-127 (148)
128 3k9i_A BH0479 protein; putativ 49.5 53 0.0018 23.1 6.7 58 9-68 28-85 (117)
129 3sz7_A HSC70 cochaperone (SGT) 49.0 79 0.0027 23.5 11.2 31 10-40 13-43 (164)
130 1na0_A Designed protein CTPR3; 48.2 55 0.0019 22.0 6.4 46 150-204 26-71 (125)
131 1ihg_A Cyclophilin 40; ppiase 47.9 14 0.00048 33.1 3.8 54 150-204 240-301 (370)
132 2v5f_A Prolyl 4-hydroxylase su 47.2 72 0.0025 22.5 7.1 53 150-204 22-74 (104)
133 1a17_A Serine/threonine protei 46.7 51 0.0017 23.9 6.3 47 150-205 30-76 (166)
134 1na0_A Designed protein CTPR3; 46.4 61 0.0021 21.8 6.4 47 150-205 60-106 (125)
135 1ya0_A SMG-7 transcript varian 46.0 45 0.0015 31.8 7.2 47 129-187 158-210 (497)
136 2ond_A Cleavage stimulation fa 45.5 1.3E+02 0.0045 25.1 14.4 50 150-204 220-269 (308)
137 1zu2_A Mitochondrial import re 45.3 51 0.0017 26.5 6.4 95 129-237 42-143 (158)
138 1hh8_A P67PHOX, NCF-2, neutrop 45.0 51 0.0018 25.4 6.4 46 150-204 54-99 (213)
139 2h6f_A Protein farnesyltransfe 44.9 1.7E+02 0.0058 26.1 14.4 59 8-68 97-156 (382)
140 2h6f_A Protein farnesyltransfe 44.5 1.7E+02 0.0059 26.1 13.5 44 11-55 203-246 (382)
141 2hr2_A Hypothetical protein; a 44.3 30 0.001 27.9 4.9 72 150-233 74-154 (159)
142 3urz_A Uncharacterized protein 44.3 51 0.0017 26.1 6.4 32 8-39 4-35 (208)
143 1dd5_A Ribosome recycling fact 44.2 46 0.0016 27.7 6.1 73 39-112 103-175 (185)
144 3caz_A BAR protein; thermo-aci 44.1 1.5E+02 0.005 25.2 11.6 108 14-165 100-210 (294)
145 2vsy_A XCC0866; transferase, g 44.1 1.9E+02 0.0066 26.5 13.7 32 9-40 24-55 (568)
146 1ise_A Ribosome recycling fact 42.4 48 0.0017 27.6 6.0 69 39-112 103-175 (185)
147 2ooe_A Cleavage stimulation fa 41.8 27 0.00093 32.1 4.8 52 150-210 63-114 (530)
148 1kt0_A FKBP51, 51 kDa FK506-bi 41.8 31 0.0011 31.6 5.2 53 150-204 285-345 (457)
149 1is1_A Ribosome recycling fact 41.5 50 0.0017 27.5 6.0 69 39-112 103-175 (185)
150 1ge9_A Ribosome recycling fact 40.6 95 0.0032 25.8 7.5 70 39-112 105-174 (184)
151 1wao_1 Serine/threonine protei 40.4 49 0.0017 30.6 6.4 27 177-204 76-102 (477)
152 1wqg_A Ribosome recycling fact 40.3 54 0.0018 27.3 6.0 69 39-112 103-175 (185)
153 3as5_A MAMA; tetratricopeptide 40.2 75 0.0025 23.1 6.4 47 150-205 93-139 (186)
154 1elr_A TPR2A-domain of HOP; HO 39.9 86 0.0029 21.3 6.6 41 10-52 81-121 (131)
155 1eh1_A Ribosome recycling fact 39.5 48 0.0016 27.6 5.5 73 39-112 104-176 (185)
156 2g0u_A Type III secretion syst 38.5 11 0.00038 28.1 1.3 62 118-186 3-68 (92)
157 2kck_A TPR repeat; tetratricop 38.2 84 0.0029 20.7 7.9 27 13-39 11-37 (112)
158 2c2l_A CHIP, carboxy terminus 37.7 47 0.0016 27.9 5.4 50 154-207 52-103 (281)
159 4abn_A Tetratricopeptide repea 36.9 2.4E+02 0.0082 25.5 13.2 162 19-204 79-249 (474)
160 3gyz_A Chaperone protein IPGC; 36.7 1.4E+02 0.0048 22.8 9.6 45 8-53 36-80 (151)
161 1w3b_A UDP-N-acetylglucosamine 36.2 2E+02 0.0068 24.4 14.8 44 9-53 34-77 (388)
162 3rkv_A Putative peptidylprolyl 35.6 1.3E+02 0.0045 22.1 12.7 70 150-236 80-149 (162)
163 3q49_B STIP1 homology and U bo 34.7 1.2E+02 0.004 21.2 9.3 50 150-208 60-109 (137)
164 1na3_A Designed protein CTPR2; 34.4 76 0.0026 20.4 5.1 59 9-69 10-68 (91)
165 2kc7_A BFR218_protein; tetratr 34.1 68 0.0023 21.4 4.9 29 12-40 4-32 (99)
166 2fo7_A Synthetic consensus TPR 33.9 99 0.0034 20.8 5.9 46 150-204 52-97 (136)
167 2ond_A Cleavage stimulation fa 33.9 57 0.002 27.4 5.3 46 150-204 186-231 (308)
168 1hh8_A P67PHOX, NCF-2, neutrop 33.8 67 0.0023 24.6 5.4 53 150-203 88-148 (213)
169 1hxi_A PEX5, peroxisome target 33.7 1.1E+02 0.0038 21.9 6.3 46 150-204 34-79 (121)
170 2r5s_A Uncharacterized protein 33.4 94 0.0032 23.5 6.2 33 9-41 109-141 (176)
171 2xcb_A PCRH, regulatory protei 32.2 1.4E+02 0.0049 21.5 10.6 32 9-40 19-50 (142)
172 1hxi_A PEX5, peroxisome target 31.8 1.4E+02 0.0048 21.3 8.4 58 9-68 18-75 (121)
173 2l6j_A TPR repeat-containing p 30.4 63 0.0022 21.7 4.2 30 10-39 6-35 (111)
174 2e2e_A Formate-dependent nitri 30.3 91 0.0031 23.3 5.5 48 150-205 61-110 (177)
175 3onj_A T-snare VTI1; helix, HA 30.1 1.6E+02 0.0055 21.5 9.0 78 24-102 10-90 (97)
176 2fbn_A 70 kDa peptidylprolyl i 27.9 1.5E+02 0.0053 22.6 6.6 59 9-69 89-147 (198)
177 4i17_A Hypothetical protein; T 27.7 2.1E+02 0.0072 22.1 14.7 59 9-69 43-101 (228)
178 3qou_A Protein YBBN; thioredox 27.1 1.9E+02 0.0064 24.1 7.5 33 9-41 220-252 (287)
179 2w9y_A CE-FAR-7, fatty acid/re 27.1 19 0.00066 28.8 1.0 75 95-172 60-136 (140)
180 2vq2_A PILW, putative fimbrial 26.7 2E+02 0.0069 21.5 16.8 63 9-72 43-105 (225)
181 2if4_A ATFKBP42; FKBP-like, al 26.1 50 0.0017 28.8 3.6 49 150-204 196-258 (338)
182 2wh5_A Acyl-COA-binding domain 26.1 87 0.003 23.6 4.5 36 22-57 10-46 (106)
183 3kfu_G Glutamyl-tRNA(Gln) amid 25.2 87 0.003 22.8 4.2 18 1-18 1-18 (92)
184 1xi4_A Clathrin heavy chain; a 25.1 7.2E+02 0.025 27.4 13.5 23 180-202 1284-1306(1630)
185 2wb7_A PT26-6P; extra chromoso 25.1 1.8E+02 0.0063 28.0 7.4 57 132-190 431-488 (526)
186 4h7y_A Dual specificity protei 23.9 77 0.0026 25.9 4.0 73 116-202 10-86 (161)
187 3ljb_A Interferon-induced GTP- 22.9 3.8E+02 0.013 23.3 9.4 107 93-211 10-120 (271)
188 2oo2_A Hypothetical protein AF 21.4 62 0.0021 23.6 2.7 51 84-142 9-61 (86)
189 2xev_A YBGF; tetratricopeptide 21.3 2E+02 0.0069 19.6 10.0 28 12-39 6-33 (129)
190 4b4t_Q 26S proteasome regulato 21.3 3.8E+02 0.013 22.8 20.1 54 150-206 152-205 (434)
191 1ouv_A Conserved hypothetical 21.0 3.2E+02 0.011 21.7 13.3 26 11-36 9-34 (273)
192 3u64_A Protein TP_0956; tetrat 21.0 1.1E+02 0.0036 27.5 4.7 63 130-204 206-268 (301)
193 3iyk_A VP5; icosahedral virus; 20.7 4.6E+02 0.016 25.2 9.2 196 22-230 121-337 (526)
194 3ub0_A Non-structural protein 20.6 74 0.0025 26.7 3.3 39 149-207 19-57 (199)
195 2ooe_A Cleavage stimulation fa 20.3 2.1E+02 0.0072 25.9 6.8 21 184-204 399-419 (530)
196 2c2l_A CHIP, carboxy terminus 20.2 1.1E+02 0.0039 25.5 4.7 30 10-39 6-35 (281)
No 1
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=3.2e-97 Score=661.38 Aligned_cols=237 Identities=59% Similarity=0.977 Sum_probs=223.7
Q ss_pred hHHhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChhhHHHH
Q 044502 7 ERETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLI 86 (262)
Q Consensus 7 ~re~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i 86 (262)
+|++++|+||||+|||||+||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.+
T Consensus 3 ~re~lv~~AklaeqaeRyddM~~~Mk~v~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~~~i 82 (248)
T 3uzd_A 3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMV 82 (248)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-HHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999877888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCc--chhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHh
Q 044502 87 KGYRHKVEEELSKICGDILTIIDKHLIPSSTSG--EATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATAN 164 (262)
Q Consensus 87 ~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~--eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~ 164 (262)
++||++|++||..+|++||++||++|||.++++ |+||||+|||||||||+|||..|++|+.++++|+++|++|+++|+
T Consensus 83 ~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~iA~ 162 (248)
T 3uzd_A 83 RAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISK 162 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchHhHHHHHHHHHhhHhhhccCCCCCC
Q 044502 165 KDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDG 243 (262)
Q Consensus 165 ~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNL~lW~~e~~~~~ 243 (262)
.+||||||||||||||||||||||+|+|++||.+|++|||+||++||+|+|++|+|||+||||||||||+||++.++++
T Consensus 163 ~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~~~~~ 241 (248)
T 3uzd_A 163 EHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDD 241 (248)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-------
T ss_pred hhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccCcccc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999977666
No 2
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=4.9e-97 Score=662.90 Aligned_cols=237 Identities=75% Similarity=1.125 Sum_probs=227.5
Q ss_pred CCcchhhHHhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccCh
Q 044502 1 MSTTEKERETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNE 80 (262)
Q Consensus 1 ~~~~~~~re~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~ 80 (262)
|++|+ +|++++|+||||||||||+||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++
T Consensus 25 ~~~m~-~re~lv~~AKLaeqaeRYddMv~~MK~v~~~~~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~ 103 (261)
T 3ubw_A 25 MGSMD-DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGE 103 (261)
T ss_dssp ------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCH
T ss_pred hhhhh-hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccH
Confidence 56665 79999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHH
Q 044502 81 HNVKLIKGYRHKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAAS 160 (262)
Q Consensus 81 ~~~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~ 160 (262)
.+++.+++||++|++||..+|++||++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|+
T Consensus 104 ~~~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~ 183 (261)
T 3ubw_A 104 DKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAAS 183 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchHhHHHHHHHHHhhHhhhccC
Q 044502 161 ATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 238 (262)
Q Consensus 161 ~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNL~lW~~e 238 (262)
++|+++||||||||||||||||||||||+|+|++||.|||+|||+||++||+|+|++|+|||+||||||||||+|+++
T Consensus 184 ~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWts~ 261 (261)
T 3ubw_A 184 DIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 261 (261)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhcCC
Confidence 999889999999999999999999999999999999999999999999999999999999999999999999999974
No 3
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=1.2e-96 Score=654.08 Aligned_cols=230 Identities=57% Similarity=0.908 Sum_probs=227.0
Q ss_pred hHHhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChhhHHHH
Q 044502 7 ERETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLI 86 (262)
Q Consensus 7 ~re~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i 86 (262)
+|++++|+|||||||||||||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.+
T Consensus 7 ~re~~v~~AklaeqaeRyddM~~~mk~v~~~~~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~~~~i 86 (236)
T 3iqu_A 7 ERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEV 86 (236)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCCSHH
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999888888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhcc
Q 044502 87 KGYRHKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKD 166 (262)
Q Consensus 87 ~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~ 166 (262)
++||++|++||..+|++||++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|+++|+++
T Consensus 87 ~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA~~~ 166 (236)
T 3iqu_A 87 REYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKE 166 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred CCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchHhHHHHHHHHHhhHhhhc
Q 044502 167 LPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWT 236 (262)
Q Consensus 167 L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNL~lW~ 236 (262)
||||||||||||||||||||||+|+|++||++|++|||+||++||+|+|++|+|||+||||||||||+||
T Consensus 167 L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWt 236 (236)
T 3iqu_A 167 MPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 236 (236)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997
No 4
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=2.8e-96 Score=660.15 Aligned_cols=245 Identities=73% Similarity=1.084 Sum_probs=224.8
Q ss_pred CCcchhhHHhHHHHHHHHHHhCCHHHHHHHHHHHHHcC--CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhcc
Q 044502 1 MSTTEKERETHVYMAKLAEQAERYEEMVESMKKVAKLG--CEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKG 78 (262)
Q Consensus 1 ~~~~~~~re~l~~~Aklaeq~eRy~dm~~~mk~~i~~~--~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~ 78 (262)
|+.|+.+|++++|+|||++|+|||+||+.+||++++.+ ++||.||||||||||||+||++|+|||+|++++|+++.++
T Consensus 1 ~~~~~~~re~~v~~AkLaeqaeRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~ 80 (260)
T 1o9d_A 1 MAVAPTAREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRG 80 (260)
T ss_dssp ----CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCcccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccC
Confidence 77788889999999999999999999999999999998 9999999999999999999999999999999999998888
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHH
Q 044502 79 NEHNVKLIKGYRHKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEA 158 (262)
Q Consensus 79 ~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~ 158 (262)
++.+++.+++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|+.++++|+++|++
T Consensus 81 ~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~ 160 (260)
T 1o9d_A 81 NEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKA 160 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchHhHHHHHHHHHhhHhhhccC
Q 044502 159 ASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 238 (262)
Q Consensus 159 A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNL~lW~~e 238 (262)
|+++|+.+||||||||||||||||||||||+|++++||.||++|||+||++||+|+|++|+|+|+||||||||||+|+++
T Consensus 161 A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlWts~ 240 (260)
T 1o9d_A 161 AQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 240 (260)
T ss_dssp HHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHhhhc
Confidence 99999889999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCC
Q 044502 239 LPEDGGE 245 (262)
Q Consensus 239 ~~~~~~~ 245 (262)
.++++++
T Consensus 241 ~~~~~~~ 247 (260)
T 1o9d_A 241 MQDDGAD 247 (260)
T ss_dssp -------
T ss_pred cCccccc
Confidence 6655443
No 5
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=4.2e-94 Score=638.43 Aligned_cols=234 Identities=75% Similarity=1.126 Sum_probs=226.9
Q ss_pred cchhhHHhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChhh
Q 044502 3 TTEKERETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHN 82 (262)
Q Consensus 3 ~~~~~re~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~ 82 (262)
+|+ +|++++|+|||++|||||+||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++++|++.+
T Consensus 1 ~m~-~re~~v~~AklaeqaeRyddm~~~mk~v~~~~~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~~ 79 (234)
T 2br9_A 1 SMD-DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDK 79 (234)
T ss_dssp ----CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred Ccc-hHHHHHHHHHHHHHHhCHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchHH
Confidence 354 6999999999999999999999999999999999999999999999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHH
Q 044502 83 VKLIKGYRHKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASAT 162 (262)
Q Consensus 83 ~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~ 162 (262)
++.+++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 80 ~~~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~i 159 (234)
T 2br9_A 80 LKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDI 159 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchHhHHHHHHHHHhhHhhhcc
Q 044502 163 ANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 237 (262)
Q Consensus 163 a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNL~lW~~ 237 (262)
|+.+||||||+||||+||||||||||+|++++||.+|++|||+|++++|+|+|++|+|+|+||||||||||+|++
T Consensus 160 A~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWts 234 (234)
T 2br9_A 160 AMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 234 (234)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred HHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 988999999999999999999999999999999999999999999999999999999999999999999999985
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=1.5e-93 Score=641.98 Aligned_cols=233 Identities=63% Similarity=0.986 Sum_probs=226.7
Q ss_pred hhhHHhHHHHHHHHHHhCCHHHHHHHHHHHHHcC---CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChh
Q 044502 5 EKERETHVYMAKLAEQAERYEEMVESMKKVAKLG---CEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEH 81 (262)
Q Consensus 5 ~~~re~l~~~Aklaeq~eRy~dm~~~mk~~i~~~---~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 81 (262)
..+|++++|+|||++|+|||+||+.+||++++.+ ++||.||||||||||||+||++|+|||+|++++|++++++++.
T Consensus 25 ~~~re~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~ 104 (260)
T 2npm_A 25 VNARESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAED 104 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHH
Confidence 4569999999999999999999999999999988 9999999999999999999999999999999999998888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHH
Q 044502 82 NVKLIKGYRHKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASA 161 (262)
Q Consensus 82 ~~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~ 161 (262)
+++.|++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 105 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 184 (260)
T 2npm_A 105 ASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATV 184 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchHhHHHHHHHHHhhHhhhccC
Q 044502 162 TANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 238 (262)
Q Consensus 162 ~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNL~lW~~e 238 (262)
+| .+||||||||||||||||||||||+|++++||.||++|||+|+++||+|+|++|+|+|+||||||||||+|+++
T Consensus 185 iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts~ 260 (260)
T 2npm_A 185 VA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260 (260)
T ss_dssp HH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC-
T ss_pred HH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhccC
Confidence 99 89999999999999999999999999999999999999999999999999999999999999999999999974
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=9e-90 Score=617.42 Aligned_cols=227 Identities=26% Similarity=0.426 Sum_probs=196.4
Q ss_pred hHHhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhh-hhccC-hhhHH
Q 044502 7 ERETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKE-ESKGN-EHNVK 84 (262)
Q Consensus 7 ~re~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~-~~~~~-~~~~~ 84 (262)
+|++++|+|||+|||||||||+.+| ++.+++||.||||||||||||+||++|+|||+|++++|++ +.+|+ +.+++
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e~~~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~~~~ 104 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TESSDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNEFIQ 104 (268)
T ss_dssp ------------------CHHHHHH---TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---HhcCCcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHHHHH
Confidence 6999999999999999999999999 7889999999999999999999999999999999999999 67777 88899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHh
Q 044502 85 LIKGYRHKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATAN 164 (262)
Q Consensus 85 ~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~ 164 (262)
.+++||++|++||..+|++||++||++|||.++++ ++|||+|||||||||+|||..|++|++++++|+++|++|+++|+
T Consensus 105 ~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~ 183 (268)
T 3efz_A 105 VIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRER 183 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999999999999999999999999999999999998
Q ss_pred ccC--CCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH---HHHhhccCCccchHhHHHHHHHHHhhHhhhccCC
Q 044502 165 KDL--PSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE---AIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDL 239 (262)
Q Consensus 165 ~~L--~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~---Ai~~ld~l~ee~y~ds~~IlqLLrDNL~lW~~e~ 239 (262)
++| |||||||||||||||||||||+|+|++||.+||+|||+ ||++||+|+|++ |+||||||||||+|+++.
T Consensus 184 ~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~ees----tlImQLLRDNLtlWtsd~ 259 (268)
T 3efz_A 184 SFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENT----EKLLKILRDNVSQWEQGC 259 (268)
T ss_dssp HHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHH----HHHHHHHHHHHHHHTTTC
T ss_pred HhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHH----HHHHHHHHHHHHHhhccc
Confidence 899 99999999999999999999999999999999999999 999999999987 999999999999999986
Q ss_pred CC
Q 044502 240 PE 241 (262)
Q Consensus 240 ~~ 241 (262)
++
T Consensus 260 ~~ 261 (268)
T 3efz_A 260 SG 261 (268)
T ss_dssp CT
T ss_pred cc
Confidence 54
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=2.5e-81 Score=551.80 Aligned_cols=215 Identities=20% Similarity=0.243 Sum_probs=198.7
Q ss_pred hHHhHH---HHHHHHHHhCCHHHHHHHHHHHHH----cCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccC
Q 044502 7 ERETHV---YMAKLAEQAERYEEMVESMKKVAK----LGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGN 79 (262)
Q Consensus 7 ~re~l~---~~Aklaeq~eRy~dm~~~mk~~i~----~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~ 79 (262)
+|++++ |+|||++|||||+||+++||++++ .+++||.||||||||||||+||++|+|||+|++++|++ +++
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k~~ 79 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFENSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--LNN 79 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CSC
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--cCC
Confidence 488999 999999999999999999999999 89999999999999999999999999999999999998 677
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHH
Q 044502 80 EHNVKLIKGYRHKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAA 159 (262)
Q Consensus 80 ~~~~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A 159 (262)
+.+++.+++||++|++||..+|++|+++||++|||.+ |+||||+|||||||||+|||..|+ +++|.++|++|
T Consensus 80 ~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~~A 151 (227)
T 2o8p_A 80 DELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQDA 151 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHHHH
Confidence 8889999999999999999999999999999999987 999999999999999999999998 78999999999
Q ss_pred HHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH---HHhhccCCccchHhHHHHHHHHHhhHh
Q 044502 160 SATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA---IAELDTLSEESYKDSTLIMQLLRDNLT 233 (262)
Q Consensus 160 ~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~A---i~~ld~l~ee~y~ds~~IlqLLrDNL~ 233 (262)
+++|+++|||||||||||+||||||||||+|+|++||.+|++||+.+ +..-+ +.+.++++|+|+|+|||||.
T Consensus 152 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E--~m~~~~~~~~~~q~~~d~~~ 226 (227)
T 2o8p_A 152 FTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQE--NMDRKAQITVYLQGIKDYIE 226 (227)
T ss_dssp HHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHC----
T ss_pred HHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccc--cchhHHHHHHHHHHHHHhcc
Confidence 99999899999999999999999999999999999999999999976 33333 23458889999999999984
No 9
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.34 E-value=0.25 Score=40.32 Aligned_cols=58 Identities=19% Similarity=0.108 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIA 208 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 208 (262)
+.|...|++|+.+++...++.+|.......|.+..++. .|+.++|+...++++..+-.
T Consensus 144 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 144 EEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 57999999999998877888899888888888877776 69999999999999876544
No 10
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=94.89 E-value=1 Score=34.98 Aligned_cols=160 Identities=13% Similarity=0.124 Sum_probs=83.2
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChhhHHHH-HH
Q 044502 10 THVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLI-KG 88 (262)
Q Consensus 10 ~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i-~~ 88 (262)
-+..++.+..+-|+|++.+.+++++++.+|.- .+=...+..+|-. .+....+...+........ ........+ .-
T Consensus 7 iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~ 82 (184)
T 3vtx_A 7 IYMDIGDKKRTKGDFDGAIRAYKKVLKADPNN-VETLLKLGKTYMD-IGLPNDAIESLKKFVVLDT--TSAEAYYILGSA 82 (184)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCC--CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCc--hhHHHHHHHHHH
Confidence 45568888999999999999999999988764 4445555655543 2334444444433222211 111100000 00
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhcc
Q 044502 89 Y--RHKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKD 166 (262)
Q Consensus 89 y--r~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~ 166 (262)
+ .... ++-...+..++. +-|. + . ..+...|..|.-+ |+ -+.|.+.|++|+++
T Consensus 83 ~~~~~~~-~~a~~~~~~a~~-----~~~~--~--~--~~~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~---- 136 (184)
T 3vtx_A 83 NFMIDEK-QAAIDALQRAIA-----LNTV--Y--A--DAYYKLGLVYDSM-----GE-----HDKAIEAYEKTISI---- 136 (184)
T ss_dssp HHHTTCH-HHHHHHHHHHHH-----HCTT--C--H--HHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH----
T ss_pred HHHcCCH-HHHHHHHHHHHH-----hCcc--c--h--HHHHHHHHHHHHh-----CC-----chhHHHHHHHHHHh----
Confidence 0 0000 111112222221 1232 1 1 1222345544322 11 25789999998865
Q ss_pred CCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 167 LPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 167 L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
.|.+| ....|.+..|+ -+|+.++|+..-++|++
T Consensus 137 -~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 137 -KPGFI---RAYQSIGLAYE-GKGLRDEAVKYFKKALE 169 (184)
T ss_dssp -CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred -cchhh---hHHHHHHHHHH-HCCCHHHHHHHHHHHHh
Confidence 34454 34455555555 47999999988777654
No 11
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=94.67 E-value=1.6 Score=36.14 Aligned_cols=185 Identities=16% Similarity=0.098 Sum_probs=99.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHc-------CCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhh-hh--cc
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKL-------GCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKE-ES--KG 78 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~-------~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~-~~--~~ 78 (262)
.-+..++.+....|+|++.+.++++++.. +......-...+..+|-. .+....|...+....... .. ..
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 106 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGKD 106 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 45667888888999999999999998864 222222223334444322 233333333332211110 00 00
Q ss_pred ChhhH----HHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHH
Q 044502 79 NEHNV----KLIKGYR-HKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSL 153 (262)
Q Consensus 79 ~~~~~----~~i~~yr-~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~ 153 (262)
.+... ....-|. ..=-++-...+...+.+.....-+ +....+..+-..|..|... |+ .+.|.
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~---~~~~~~~~~~~la~~~~~~-----~~-----~~~A~ 173 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGK---DHPDVAKQLNNLALLCQNQ-----GK-----YEEVE 173 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCT---TCHHHHHHHHHHHHHHHTT-----TC-----HHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCC---CChHHHHHHHHHHHHHHHc-----CC-----HHHHH
Confidence 01000 0000010 000122233444444444332212 1122233333344444322 11 35799
Q ss_pred HHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 044502 154 KGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIA 208 (262)
Q Consensus 154 ~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 208 (262)
..|++|++++....++.+|.......+.+..++. .|+.++|+...++++..+-.
T Consensus 174 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 174 YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 9999999999877778888888788888877776 69999999999999876543
No 12
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=93.29 E-value=0.91 Score=43.37 Aligned_cols=100 Identities=10% Similarity=0.056 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccCCCCCcch
Q 044502 95 EELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDLPSTHPIR 174 (262)
Q Consensus 95 ~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~pir 174 (262)
+|-..+|...+.+-...|=|.. + ..+=-+.--|..|+..-. -+.|...|++|+++-+..|+|.||.-
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~H--p-~~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTN--L-YVLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTS--H-HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--H-HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 3445667777777766664432 1 111111223333332211 15699999999999988999999999
Q ss_pred hhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 044502 175 LGLALNFSVFYYEIMNSPERACHLAKQAFDEAIA 208 (262)
Q Consensus 175 LgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 208 (262)
+....|.++.|+. .|+.++|..+.++|+.--..
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999998887 69999999999999765544
No 13
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=92.65 E-value=4.2 Score=34.46 Aligned_cols=72 Identities=10% Similarity=0.089 Sum_probs=49.3
Q ss_pred hhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccCCCCCcc-hhhhhhhhHHHHHHHhCChHHHHHHHH
Q 044502 122 TVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDLPSTHPI-RLGLALNFSVFYYEIMNSPERACHLAK 200 (262)
Q Consensus 122 kvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~pi-rLgLaLN~SVF~yEi~~~~~~A~~iak 200 (262)
.+..+...|..|...-. -+.|...|++|+++++. .+. +|. ...+..|.+..|+. +|+.++|+...+
T Consensus 154 ~~~~~~~lg~~y~~~~~----------~~~A~~~~~kal~~~~~-~~~-~~~~~~~~~~nlg~~y~~-~~~y~~Al~~~~ 220 (293)
T 2qfc_A 154 NLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA-LHD-NEEFDVKVRYNHAKALYL-DSRYEESLYQVN 220 (293)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SCC-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-cCc-cccchHHHHHhHHHHHHH-HhhHHHHHHHHH
Confidence 34344556666654322 25799999999999863 443 332 23566777777665 799999999999
Q ss_pred HHHHHH
Q 044502 201 QAFDEA 206 (262)
Q Consensus 201 ~afd~A 206 (262)
+|++-+
T Consensus 221 kal~~~ 226 (293)
T 2qfc_A 221 KAIEIS 226 (293)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998765
No 14
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=92.52 E-value=4.4 Score=34.34 Aligned_cols=57 Identities=11% Similarity=0.110 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIA 208 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 208 (262)
+.|...|++|+++++ .++..+|....+..|.+..|++ +|+.++|+...++|++-+..
T Consensus 172 ~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 172 KKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence 679999999999986 4666677777788999998887 69999999999999876643
No 15
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=92.22 E-value=3.9 Score=33.28 Aligned_cols=53 Identities=11% Similarity=0.008 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 151 QSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 151 ~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
.|...|++|+++....-.+.++.......+.+.+ |...|+.++|+...++++.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYY-YTINRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHh
Confidence 4888999999998543222212222334444444 4457999999988777764
No 16
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=91.95 E-value=4.2 Score=36.30 Aligned_cols=49 Identities=16% Similarity=0.139 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 203 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~af 203 (262)
+.|...|++|+++ .|.++..-.+.+++..|++...|+.++|+..-++|+
T Consensus 351 ~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 351 EEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 5789999999854 344444555677888888777899999988766654
No 17
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=91.92 E-value=4.1 Score=32.67 Aligned_cols=60 Identities=15% Similarity=0.014 Sum_probs=42.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSS 69 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ 69 (262)
+.+..++.+.-+.|+|++.+.++.+++..+|.-+..-...+..+|-. .+....|.+.+..
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 67 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADN-IKKYKEAADYFDI 67 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHH-hhcHHHHHHHHHH
Confidence 57788899999999999999999999998874444444445555443 3455555555543
No 18
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=91.78 E-value=0.77 Score=43.18 Aligned_cols=100 Identities=15% Similarity=0.083 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccCCCCCcch
Q 044502 95 EELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDLPSTHPIR 174 (262)
Q Consensus 95 ~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~pir 174 (262)
+|-..+|...+.+-.+.|=|.. + ..+=-+.--|.-|+.. | . -+.|...|++|+++-+..++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~H--p-~~a~~~~nLa~~y~~~-----g-~----~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSN--V-YMLHMMYQAMGVCLYM-----Q-D----WEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTS--H-HHHHHHHHHHHHHHHT-----T-C----HHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhc--h-HHHHHHHHHHHHHHhh-----c-C----HHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 3455667777777766665432 1 1111111223333221 1 1 25799999999999988999999999
Q ss_pred hhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 044502 175 LGLALNFSVFYYEIMNSPERACHLAKQAFDEAIA 208 (262)
Q Consensus 175 LgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 208 (262)
.....|.++-|+. .|+.++|..+-++|+.=-..
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHH
Confidence 9999999988776 69999999999998776554
No 19
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=91.60 E-value=5 Score=33.00 Aligned_cols=190 Identities=11% Similarity=0.015 Sum_probs=98.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHH----HHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChhh-H
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEE----RNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHN-V 83 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eE----RnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~-~ 83 (262)
..+...+....+.|+|++.+.++++++...+. +.+. ...+..+|- ..+....+...+.....-....+.... .
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 46777889999999999999999999987655 2221 123333332 223333444433321111100011110 0
Q ss_pred ----HHHHHH-HHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcc----------cchHHHHH
Q 044502 84 ----KLIKGY-RHKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFK----------VDQERKEA 148 (262)
Q Consensus 84 ----~~i~~y-r~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~----------~~~~~~~~ 148 (262)
....-| ...--++-...+...+.+.... .+....+..+...|..|...-... ..++-...
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 158 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNA 158 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHH
Confidence 000001 0001122334444555554432 233334445556677776665511 01222344
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 044502 149 AEQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIA 208 (262)
Q Consensus 149 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 208 (262)
.+.|...|++|+.++.. .+ .+|.......+.+.. |.-.|+.++|+...++++.-+-.
T Consensus 159 ~~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~l~~~-~~~~~~~~~A~~~~~~a~~~~~~ 215 (338)
T 3ro2_A 159 LQAAVDLYEENLSLVTA-LG-DRAAQGRAFGNLGNT-HYLLGNFRDAVIAHEQRLLIAKE 215 (338)
T ss_dssp HHHHHHHHHHHHHHHHH-HT-CHHHHHHHHHHHHHH-HHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-cC-CHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHh
Confidence 67888889999888754 22 233333344444444 44579999999998888766543
No 20
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=91.26 E-value=0.31 Score=45.71 Aligned_cols=58 Identities=17% Similarity=0.109 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIA 208 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 208 (262)
+.|...|++|+.+-+..++|.||.......|.++-|.. .|+.++|..+.++|++--..
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHH
Confidence 57999999999999889999999999999999998887 69999999999998876544
No 21
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=90.66 E-value=1.1 Score=36.29 Aligned_cols=57 Identities=14% Similarity=0.050 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 207 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai 207 (262)
+.|...|++|+.+.+....|.+|.......|.+..++. +|+.++|+...+++++-..
T Consensus 102 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 158 (283)
T 3edt_B 102 KEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIYA 158 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHH
Confidence 57999999999999877888889888888888887776 6999999999999987743
No 22
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=90.46 E-value=11 Score=34.85 Aligned_cols=173 Identities=18% Similarity=0.124 Sum_probs=90.0
Q ss_pred HhHHHHHHHHHHhCCH-HHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChhhHHHHH
Q 044502 9 ETHVYMAKLAEQAERY-EEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIK 87 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy-~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~ 87 (262)
.-+..++++....|+| ++.+.++++++..+|.. .+=...|..+|-.. +....|...+....+.... ......+-.
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~--~~~~~~lg~ 178 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVKLEPEL-VEAWNQLGEVYWKK-GDVTSAHTCFSGALTHCKN--KVSLQNLSM 178 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHH-TCHHHHHHHHHHHHTTCCC--HHHHHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCC--HHHHHHHHH
Confidence 3456777777788888 88888888888876653 44555666665432 4444444444322211110 010111111
Q ss_pred HHHH----------HHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHH
Q 044502 88 GYRH----------KVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYE 157 (262)
Q Consensus 88 ~yr~----------kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~ 157 (262)
-|.. .=-++-...+...+.+ -|. + ..+ +-..|..|.... +..+. ...-.+.|..+|+
T Consensus 179 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~--~--~~~--~~~lg~~~~~~~-~~~~~-~~g~~~~A~~~~~ 245 (474)
T 4abn_A 179 VLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVL--D--GRS--WYILGNAYLSLY-FNTGQ-NPKISQQALSAYA 245 (474)
T ss_dssp HHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTT--C--HHH--HHHHHHHHHHHH-HHTTC-CHHHHHHHHHHHH
T ss_pred HHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCC--C--HHH--HHHHHHHHHHHH-Hhhcc-ccchHHHHHHHHH
Confidence 1111 0012223344444432 232 1 122 223455554331 11121 1122468999999
Q ss_pred HHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 158 AASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 158 ~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+|+.+. |.+|-......|.+..|+. +|+.++|+...++|+.
T Consensus 246 ~al~~~-----p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 246 QAEKVD-----RKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHHC-----GGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHhC-----CCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 998772 3222555666777777776 6999999988777754
No 23
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=90.41 E-value=9.7 Score=34.26 Aligned_cols=49 Identities=12% Similarity=0.048 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 044502 149 AEQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 206 (262)
Q Consensus 149 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~A 206 (262)
.+.|...|++|+++ .|.+| ....+.+..|+ -+|+.++|+...+++++-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKL-QMEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HhccHHHHHHHHHHHHHhC
Confidence 36788888888765 34454 33455555555 4799999999888877654
No 24
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=90.04 E-value=8.1 Score=32.81 Aligned_cols=58 Identities=16% Similarity=0.260 Sum_probs=37.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMS 68 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~ 68 (262)
.-+..++.+....|+|++.+.++++++..+|. +.+-...+..+|-. .+....|...+.
T Consensus 99 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 156 (368)
T 1fch_A 99 EAWQYLGTTQAENEQELLAISALRRCLELKPD-NQTALMALAVSFTN-ESLQRQACEILR 156 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 34567788888888899888888888887665 34444555555543 344444444444
No 25
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=89.91 E-value=1.2 Score=41.83 Aligned_cols=59 Identities=10% Similarity=0.010 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHh
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAE 209 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ 209 (262)
+.|...|++|+++.+..|.|.||..+...-|.+.-|.. +|+.++|..+.++|+.--..-
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~ 373 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSKH 373 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHH
Confidence 56788999999999889999999999988888887776 799999999999997765543
No 26
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=89.61 E-value=7.9 Score=32.04 Aligned_cols=45 Identities=13% Similarity=0.056 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 203 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~af 203 (262)
+.|...|++|+++. |.+| ....+.+..++ -+|+.++|+...++++
T Consensus 253 ~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~al 297 (330)
T 3hym_B 253 AEALDYHRQALVLI-----PQNA---STYSAIGYIHS-LMGNFENAVDYFHTAL 297 (330)
T ss_dssp HHHHHHHHHHHHHS-----TTCS---HHHHHHHHHHH-HHTCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhhC-----ccch---HHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 57899999998763 3333 23345555544 4799999988776654
No 27
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=89.13 E-value=8.2 Score=31.61 Aligned_cols=55 Identities=15% Similarity=-0.017 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 207 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai 207 (262)
+.|...|++|++++.. . .+|...+.+++.-...|...|+.++|+...++++.-.-
T Consensus 200 ~~A~~~~~~a~~~~~~-~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 200 RDAVIAHEQRLLIAKE-F--GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp HHHHHHHHHHHHHHHH-H--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-c--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 5688899999988864 2 23444444444444455567999999998888876543
No 28
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=89.09 E-value=3.2 Score=36.45 Aligned_cols=72 Identities=18% Similarity=0.185 Sum_probs=48.0
Q ss_pred hhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccCCCCCcchhhh-hhhhHHHHHHHhCChHHHHHHHH
Q 044502 122 TVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDLPSTHPIRLGL-ALNFSVFYYEIMNSPERACHLAK 200 (262)
Q Consensus 122 kvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~pirLgL-aLN~SVF~yEi~~~~~~A~~iak 200 (262)
..+|+-.+|.+|...-. -+.|...|++|+.+++. .+ +|...+. ..+.+..|+ .+|+.++|+...+
T Consensus 102 ~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~-~~~~~~~A~~~~~ 167 (383)
T 3ulq_A 102 EYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-VK--DRIEKAEFFFKMSESYY-YMKQTYFSMDYAR 167 (383)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC--CHHHHHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-CC--CHHHHHHHHHHHHHHHH-HcCCHHHHHHHHH
Confidence 45566667777654322 25789999999999863 32 3444444 445555555 4899999999988
Q ss_pred HHHHHHH
Q 044502 201 QAFDEAI 207 (262)
Q Consensus 201 ~afd~Ai 207 (262)
+|++-.-
T Consensus 168 ~al~~~~ 174 (383)
T 3ulq_A 168 QAYEIYK 174 (383)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8876543
No 29
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=89.05 E-value=1.5 Score=41.94 Aligned_cols=59 Identities=17% Similarity=0.082 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHh
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAE 209 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ 209 (262)
+.|...|++|+++.+.-|.|.||..+...-|.+..|.. .|+.++|..+.++|++--..-
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~ 384 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMKL 384 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHH
Confidence 46778899999999889999999999999999888876 699999999999998765543
No 30
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=89.03 E-value=11 Score=32.77 Aligned_cols=191 Identities=14% Similarity=0.062 Sum_probs=97.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCH---HHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChh-hH-
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTV---EERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEH-NV- 83 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~---eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~- 83 (262)
..+..++....+.|+|++.+.++++++...+.-.. .=...+..+|- ..+....+...+....+.....+... ..
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 127 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYF-YLGDYNKAMQYHKHDLTLAKSMNDRLGEAK 127 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccCchHHHH
Confidence 45667888889999999999999999988665221 11233333332 23344444444432211100001110 00
Q ss_pred ---HHHHHH-HHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhc-------ccchHHHHHHHHH
Q 044502 84 ---KLIKGY-RHKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEF-------KVDQERKEAAEQS 152 (262)
Q Consensus 84 ---~~i~~y-r~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~-------~~~~~~~~~~~~A 152 (262)
....-| ...=-++-...+..++.+.... .+....+..+...|..|...-.. ....+-....+.|
T Consensus 128 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A 202 (411)
T 4a1s_A 128 SSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRA 202 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHH
Confidence 000000 0000123334444555544332 12223333344456555544330 0011223346789
Q ss_pred HHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 044502 153 LKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIA 208 (262)
Q Consensus 153 ~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 208 (262)
...|++|++++.. + +.+|.......+.+..++ -.|+.++|+...++++.-.-.
T Consensus 203 ~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~ 255 (411)
T 4a1s_A 203 VEFYQENLKLMRD-L-GDRGAQGRACGNLGNTYY-LLGDFQAAIEHHQERLRIARE 255 (411)
T ss_dssp HHHHHHHHHHHHH-H-TCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-c-CCHHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHh
Confidence 9999999998864 2 223444444445555444 579999999998888765543
No 31
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=87.99 E-value=11 Score=31.49 Aligned_cols=46 Identities=9% Similarity=-0.005 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+++ .|.+| ....+.+..++ ..|+.++|+...++|+.
T Consensus 289 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 289 VEAIRICSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 5688888888765 34443 34555555555 47999999887777653
No 32
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=87.79 E-value=13 Score=32.34 Aligned_cols=174 Identities=9% Similarity=-0.045 Sum_probs=87.4
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHcCCCCCH-----HHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccC-hhhH----
Q 044502 14 MAKLAEQAERYEEMVESMKKVAKLGCEMTV-----EERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGN-EHNV---- 83 (262)
Q Consensus 14 ~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~-----eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~-~~~~---- 83 (262)
++.+.-..|+|++++.++++.+..-..... +=...+..+|-. .+..-.|...+.....--...+. ....
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 187 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKEHEAYNIRLLQCH 187 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCccchHHHHHHH
Confidence 788888899999999999999865222222 122334444332 23333333333211110000011 0000
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHH
Q 044502 84 ---KLIKGYRHKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAAS 160 (262)
Q Consensus 84 ---~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~ 160 (262)
..+-...... ++=...+...+.+.... .+.......+.-.|..|..+-. -+.|...|++|+
T Consensus 188 ~~lg~~~~~~g~~-~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~g~----------~~~A~~~~~~al 251 (383)
T 3ulq_A 188 SLFATNFLDLKQY-EDAISHFQKAYSMAEAE-----KQPQLMGRTLYNIGLCKNSQSQ----------YEDAIPYFKRAI 251 (383)
T ss_dssp HHHHHHHHHTTCH-HHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCH-HHHHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHH
Confidence 0000000000 12233344444444332 2222233333335655543321 267999999999
Q ss_pred HHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 044502 161 ATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 207 (262)
Q Consensus 161 ~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai 207 (262)
++++..-. .|.......|.+..|+. +|+.++|+...++|+.-+-
T Consensus 252 ~~~~~~~~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 252 AVFEESNI--LPSLPQAYFLITQIHYK-LGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHTTC--GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcc--chhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 99865322 14444455556665554 7999999999988877654
No 33
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=87.46 E-value=13 Score=31.81 Aligned_cols=59 Identities=7% Similarity=-0.085 Sum_probs=41.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSS 69 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ 69 (262)
+.++.++....+.|+|++.+.++++++..+|.- .+=...+..+|-. .+....|...+..
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~~-~g~~~~A~~~~~~ 124 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQDPGD-AEAWQFLGITQAE-NENEQAAIVALQR 124 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCC-HHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 347888999999999999999999999887653 4455555555543 3445555555543
No 34
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=87.38 E-value=15 Score=32.58 Aligned_cols=55 Identities=15% Similarity=0.118 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHhccC--CCCC----cchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 149 AEQSLKGYEAASATANKDL--PSTH----PIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 149 ~~~A~~aY~~A~~~a~~~L--~pt~----pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
.+.|...|++++..-...+ .|.+ |.......+.+..++. .|+.++|+...++++.
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~ 265 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIE 265 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 4678888888887433223 4444 5555556666666555 6999999998888764
No 35
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=87.12 E-value=9 Score=30.94 Aligned_cols=44 Identities=11% Similarity=0.061 Sum_probs=26.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGY 53 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvay 53 (262)
+-+..++.+..+.|+|++.+..+.+++..+|.. .+=...+..+|
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~ 49 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKENPQD-PEALYWLARTQ 49 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHH
Confidence 445566677777777777777777777665543 33344444443
No 36
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=87.08 E-value=11 Score=30.80 Aligned_cols=64 Identities=14% Similarity=0.066 Sum_probs=44.5
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCC--HHHHHHHHHHHhhhhhhhHHHHHHHHhhhh
Q 044502 8 RETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMT--VEERNLLSVGYKNVIGARRASWRIMSSIEQ 72 (262)
Q Consensus 8 re~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt--~eERnLLsvayKn~i~~~R~s~R~l~~ieq 72 (262)
-+.+..+|...-+.|+|++.+..+++++...|.-. .+=...+..+|-. .+....|...+..+..
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 80 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQ 80 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 46778889999999999999999999998766543 4445555555533 3555666666654433
No 37
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=86.72 E-value=0.64 Score=43.51 Aligned_cols=58 Identities=16% Similarity=0.086 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIA 208 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 208 (262)
+.|...|++|+++.+.-|+|.||..+...-|.+.-|.. +|+.++|..+.++++.--..
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~ 361 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRI 361 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHH
Confidence 45677788888887778999999999999998887766 69999999999998766544
No 38
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=86.61 E-value=1.7 Score=32.56 Aligned_cols=48 Identities=15% Similarity=0.214 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 206 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~A 206 (262)
+.|...|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.-.
T Consensus 25 ~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~ 72 (127)
T 4gcn_A 25 EKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEVG 72 (127)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHhC
Confidence 6799999999875 45554 345677777776 799999999988887643
No 39
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=85.60 E-value=16 Score=31.14 Aligned_cols=192 Identities=12% Similarity=0.027 Sum_probs=97.6
Q ss_pred hHHhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCH---HHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChhhH
Q 044502 7 ERETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTV---EERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNV 83 (262)
Q Consensus 7 ~re~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~---eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~ 83 (262)
.-..+..++...-+.|+|++.+.++.+++...+.-.. .=...++.+|-. .+....+...+.....-....+.....
T Consensus 8 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~ 86 (406)
T 3sf4_A 8 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQLGE 86 (406)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccccHHH
Confidence 3345677888999999999999999999988665221 122234444332 233334444332211110000111100
Q ss_pred -----HHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhc-------c---cchHHHH
Q 044502 84 -----KLIKGYR-HKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEF-------K---VDQERKE 147 (262)
Q Consensus 84 -----~~i~~yr-~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~-------~---~~~~~~~ 147 (262)
....-|. ..=-++-...+...+.+.... .+....+..+-..|..|...-.. . ..++-..
T Consensus 87 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~ 161 (406)
T 3sf4_A 87 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRD 161 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHH
Confidence 0000010 000123334444555544332 12222333333455555444330 0 1123334
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 044502 148 AAEQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 207 (262)
Q Consensus 148 ~~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai 207 (262)
..+.|...|++|+.++.. . +.+|.......|.+..++ -+|+.++|+...++|+.-+-
T Consensus 162 ~~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 218 (406)
T 3sf4_A 162 ALQAAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAK 218 (406)
T ss_dssp HHHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHH-HHTBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHH
Confidence 567889999999998864 3 234444444555555554 47999999998888876543
No 40
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=84.73 E-value=4.7 Score=35.36 Aligned_cols=74 Identities=15% Similarity=0.113 Sum_probs=50.2
Q ss_pred hhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHH
Q 044502 121 ATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAK 200 (262)
Q Consensus 121 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak 200 (262)
...+|+-.+|.+|...-. -+.|...|++|+.++.. ++ .+|..-....|.+.+|+. +|+.++|+...+
T Consensus 99 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~-~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~~ 165 (378)
T 3q15_A 99 LKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-VS-DDIEKAEFHFKVAEAYYH-MKQTHVSMYHIL 165 (378)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-CC-ChHHHHHHHHHHHHHHHH-cCCcHHHHHHHH
Confidence 345556667877654422 25789999999999853 33 234444455566666654 799999999999
Q ss_pred HHHHHHH
Q 044502 201 QAFDEAI 207 (262)
Q Consensus 201 ~afd~Ai 207 (262)
+|++-.-
T Consensus 166 ~al~~~~ 172 (378)
T 3q15_A 166 QALDIYQ 172 (378)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8876554
No 41
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=84.59 E-value=13 Score=29.25 Aligned_cols=59 Identities=10% Similarity=0.030 Sum_probs=35.5
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSS 69 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ 69 (262)
.-+..++.+..+.|+|++.+.++++++...+.. ..-...+..+|-. .+....+...+..
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~~ 116 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALELDSSA-ATAYYGAGNVYVV-KEMYKEAKDMFEK 116 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc-hHHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 445667788888888888888888888776542 3333444444432 3344444444443
No 42
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=84.02 E-value=17 Score=36.14 Aligned_cols=45 Identities=16% Similarity=0.149 Sum_probs=34.4
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Q 044502 8 RETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGY 53 (262)
Q Consensus 8 re~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvay 53 (262)
-+-+..++.+..+.|+|++.+.+.+++++.+|+.. +=.+-|..+|
T Consensus 9 a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~-~a~~nLg~~l 53 (723)
T 4gyw_A 9 ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFA-AAHSNLASVL 53 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHH
Confidence 45677889999999999999999999999988753 3333344443
No 43
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=84.00 E-value=9.8 Score=27.36 Aligned_cols=54 Identities=15% Similarity=0.148 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 206 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~A 206 (262)
+.|...|++|++++.. .+ .+|.......+.+..+ .-.|+.++|+...++|+.-+
T Consensus 106 ~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 106 EKAIDYHLKHLAIAQE-LK-DRIGEGRACWSLGNAY-TALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HHHHHHHHHHHHHHHH-TT-CHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-cc-chHhHHHHHHHHHHHH-HHccCHHHHHHHHHHHHHHH
Confidence 5789999999999864 22 2233333444555544 45799999999888877654
No 44
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=83.24 E-value=18 Score=29.79 Aligned_cols=55 Identities=13% Similarity=-0.070 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCC-cchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTH-PIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~-pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
+.|...|++|+.+....-.+.+ |-...+..+.+..++ ..|+.++|+...++++..
T Consensus 210 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 210 KTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCR-KLKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 5789999999998854333322 333345556666555 479999999988887653
No 45
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=82.51 E-value=19 Score=29.57 Aligned_cols=58 Identities=10% Similarity=-0.012 Sum_probs=36.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMS 68 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~ 68 (262)
+.++.+|...-+.|+|++.+.++++++...|. +..-...+..+|-. .+....+...+.
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~ 79 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAE-NEKDGLAIIALN 79 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 45677888888888888888888888877665 34444445544433 234444444443
No 46
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=82.42 E-value=29 Score=31.66 Aligned_cols=47 Identities=6% Similarity=0.126 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 149 AEQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 149 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
.+.|...|++++++. |.+| ....+.+.. |...|+.++|+...+++++
T Consensus 532 ~~~A~~~~~~~~~~~-----p~~~---~~~~~l~~~-~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 532 YDAAIDALNQGLLLS-----TNDA---NVHTAIALV-YLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HHHHHHHHHHHHHHS-----SCCH---HHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCCh---HHHHHHHHH-HHHhCCHHHHHHHHHHHHh
Confidence 357888888888663 4555 233333333 4458999999988877765
No 47
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=82.25 E-value=22 Score=30.20 Aligned_cols=28 Identities=11% Similarity=0.005 Sum_probs=23.0
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHHc
Q 044502 10 THVYMAKLAEQAERYEEMVESMKKVAKL 37 (262)
Q Consensus 10 ~l~~~Aklaeq~eRy~dm~~~mk~~i~~ 37 (262)
-+..++.+....|+|++.+.++++++..
T Consensus 49 ~~~~l~~~~~~~g~~~~A~~~~~~al~~ 76 (406)
T 3sf4_A 49 IYSQLGNAYFYLHDYAKALEYHHHDLTL 76 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 3557788888899999999999988754
No 48
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=82.24 E-value=24 Score=30.48 Aligned_cols=28 Identities=11% Similarity=0.007 Sum_probs=23.1
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHHc
Q 044502 10 THVYMAKLAEQAERYEEMVESMKKVAKL 37 (262)
Q Consensus 10 ~l~~~Aklaeq~eRy~dm~~~mk~~i~~ 37 (262)
-+..++.+....|+|++.+.++++++..
T Consensus 88 ~~~~lg~~~~~~g~~~~A~~~~~~al~~ 115 (411)
T 4a1s_A 88 IYSQLGNAYFYLGDYNKAMQYHKHDLTL 115 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3557788888889999999999988864
No 49
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=81.74 E-value=17 Score=28.61 Aligned_cols=32 Identities=6% Similarity=0.038 Sum_probs=27.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCC
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCE 40 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~ 40 (262)
.-+..++.+..+.|+|++.+.++++++...+.
T Consensus 80 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 111 (258)
T 3uq3_A 80 KSFARIGNAYHKLGDLKKTIEYYQKSLTEHRT 111 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCch
Confidence 34567888899999999999999999987665
No 50
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=81.47 E-value=27 Score=30.53 Aligned_cols=57 Identities=16% Similarity=0.098 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 044502 11 HVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSS 69 (262)
Q Consensus 11 l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ 69 (262)
...+|.+..+.|+|++.+.++.+++...|. +..-...+..+|-. .+....+...+..
T Consensus 146 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 202 (450)
T 2y4t_A 146 LRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIK-EGEPRKAISDLKA 202 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCGGGGHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 344577788899999999999999987664 34445555555433 2334444444443
No 51
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=81.18 E-value=27 Score=30.46 Aligned_cols=169 Identities=13% Similarity=0.061 Sum_probs=84.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChhhHHHH--
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLI-- 86 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i-- 86 (262)
.-+..++.+..+.|+|++++..+.+++..+|.- .+-...+..+|-. .+....|+..+........ .+......+
T Consensus 178 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~p--~~~~~~~~~~~ 253 (450)
T 2y4t_A 178 ELRELRAECFIKEGEPRKAISDLKAASKLKNDN-TEAFYKISTLYYQ-LGDHELSLSEVRECLKLDQ--DHKRCFAHYKQ 253 (450)
T ss_dssp HHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCSC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCC--ChHHHHHHHHH
Confidence 345677888889999999999999998765543 4445555555543 3455555555544332211 111111111
Q ss_pred -HHHHHHHHHHHHHH------HHHHHHHHHhcc--CCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHH
Q 044502 87 -KGYRHKVEEELSKI------CGDILTIIDKHL--IPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYE 157 (262)
Q Consensus 87 -~~yr~kie~EL~~~------C~eii~lId~~L--ip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~ 157 (262)
...... ..+-.. -.+.+..++..+ -|. ++......+...|+.|.-. |+ .+.|...|+
T Consensus 254 ~~~~~~~--~~~~~~~~~~g~~~~A~~~~~~~l~~~p~--~~~~~~~~~~~l~~~~~~~-----g~-----~~~A~~~~~ 319 (450)
T 2y4t_A 254 VKKLNKL--IESAEELIRDGRYTDATSKYESVMKTEPS--IAEYTVRSKERICHCFSKD-----EK-----PVEAIRVCS 319 (450)
T ss_dssp HHHHHHH--HHHHHHHHHHTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHHHHHTT-----TC-----HHHHHHHHH
T ss_pred HHHHHHH--HHHHHHHHHcCCHHHHHHHHHHHHhcCCc--chHHHHHHHHHHHHHHHHC-----CC-----HHHHHHHHH
Confidence 000000 000000 122233333222 232 2221122223334444222 21 356888888
Q ss_pred HHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 158 AASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 158 ~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+|+.+ .|.+| ....+.+..+. ..|+.++|+...++++.
T Consensus 320 ~a~~~-----~p~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 320 EVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 88765 34444 33444444444 57999999988887764
No 52
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=80.15 E-value=31 Score=30.48 Aligned_cols=171 Identities=9% Similarity=-0.061 Sum_probs=80.1
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChh-hHHHHHH
Q 044502 10 THVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEH-NVKLIKG 88 (262)
Q Consensus 10 ~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~i~~ 88 (262)
-+..++.+....|+|++.+.++++++...|... +-...+..+|- ..+....+...+........ .+.. ......-
T Consensus 306 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~--~~~~~~~~la~~ 381 (514)
T 2gw1_A 306 VYYHRGQMNFILQNYDQAGKDFDKAKELDPENI-FPYIQLACLAY-RENKFDDCETLFSEAKRKFP--EAPEVPNFFAEI 381 (514)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCS-HHHHHHHHHTT-TTTCHHHHHHHHHHHHHHST--TCSHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhH-HHHHHHHHHHH-HcCCHHHHHHHHHHHHHHcc--cCHHHHHHHHHH
Confidence 455677788888888888888888887766532 23333333332 23444455555543322211 1111 1111111
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccC
Q 044502 89 YR-HKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDL 167 (262)
Q Consensus 89 yr-~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L 167 (262)
|. ..--++-......++.+- |........+..+-..|..|.... ..|+ .+.|...|++|+.+
T Consensus 382 ~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~--~~~~-----~~~A~~~~~~a~~~----- 444 (514)
T 2gw1_A 382 LTDKNDFDKALKQYDLAIELE-----NKLDGIYVGIAPLVGKATLLTRNP--TVEN-----FIEATNLLEKASKL----- 444 (514)
T ss_dssp HHHTTCHHHHHHHHHHHHHHH-----HTSSSCSSCSHHHHHHHHHHHTSC--CTTH-----HHHHHHHHHHHHHH-----
T ss_pred HHHCCCHHHHHHHHHHHHHhh-----hccchHHHHHHHHHHHHHHHhhhh--hcCC-----HHHHHHHHHHHHHh-----
Confidence 10 000112223333333322 211111111112222333332100 0221 35788899988865
Q ss_pred CCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 168 PSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 168 ~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
.|.+| ....+.+..+. -.|+.++|+...+++++-
T Consensus 445 ~~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 478 (514)
T 2gw1_A 445 DPRSE---QAKIGLAQMKL-QQEDIDEAITLFEESADL 478 (514)
T ss_dssp CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHHh
Confidence 34443 33344454444 579999999888777653
No 53
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=79.44 E-value=34 Score=30.55 Aligned_cols=59 Identities=10% Similarity=0.017 Sum_probs=34.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSS 69 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ 69 (262)
+.+..++....+.|+|++.+.++++++..+|. +..=...+..+|-. .+....|.+.+..
T Consensus 26 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~-~g~~~~A~~~~~~ 84 (537)
T 3fp2_A 26 VQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYIS-TGDLEKVIEFTTK 84 (537)
T ss_dssp HHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 44566777777777777777777777776554 23444445555432 3444555555543
No 54
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=79.11 E-value=2.2 Score=32.67 Aligned_cols=54 Identities=13% Similarity=0.214 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHhccC---CCC-------CcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDL---PST-------HPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L---~pt-------~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+.+..... .|+ +|....+.+|.+..|+. +|+.++|+..+.+|+.
T Consensus 28 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 28 KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 578999999999864321 233 66777888888888776 6999999998888754
No 55
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=78.17 E-value=5.5 Score=29.63 Aligned_cols=46 Identities=13% Similarity=0.101 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|.+.|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 5789999999865 34444 445666666665 6999999988777754
No 56
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=78.17 E-value=34 Score=29.80 Aligned_cols=180 Identities=9% Similarity=-0.004 Sum_probs=91.2
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHH-----HHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChhhHHH
Q 044502 11 HVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEE-----RNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKL 85 (262)
Q Consensus 11 l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eE-----RnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~ 85 (262)
+..++++....|+|++++++++++....+.++... ++++...+. ..+..-.+...+..........++......
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 136 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQ-VPDSLDDQIFVCEKSIEFAKREKRVFLKHS 136 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCS-CCSCHHHHHHHHHHHHHHHHHSSCCSSHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHhCccHHHHH
Confidence 67889999999999999999999887655665432 222222221 111122222222111111000111100000
Q ss_pred HHHHHHHHH------HHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHH
Q 044502 86 IKGYRHKVE------EELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAA 159 (262)
Q Consensus 86 i~~yr~kie------~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A 159 (262)
+....-++- .+-..+.++++.... ...+....+-++-..|..|.-+ ++ .++|...|++|
T Consensus 137 ~~~~la~~~~~~g~~~~A~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~A~~~~~~a 201 (434)
T 4b4t_Q 137 LSIKLATLHYQKKQYKDSLALINDLLREFK-----KLDDKPSLVDVHLLESKVYHKL-----RN-----LAKSKASLTAA 201 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHT-----TSSCSTHHHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHccChHHHHHHHHHHHHHHH-----hcccchhHHHHHHHHHHHHHHh-----Cc-----HHHHHHHHHHH
Confidence 111111111 112222223322221 1222233443334445444322 11 25789999999
Q ss_pred HHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 044502 160 SATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIA 208 (262)
Q Consensus 160 ~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 208 (262)
..++.. .+ ..|.-.|...+...-+|...++..+|+....++|...-.
T Consensus 202 l~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~ 248 (434)
T 4b4t_Q 202 RTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHN 248 (434)
T ss_dssp HHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 999853 43 233445666777777777889999999988888876543
No 57
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=78.00 E-value=24 Score=28.02 Aligned_cols=165 Identities=10% Similarity=0.003 Sum_probs=83.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChh-hHHHHH
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEH-NVKLIK 87 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~i~ 87 (262)
+-+..++.+..+.|+|++.+.++++++..++.. .+-...+..+|-. .+....|...+....+... .+.. ......
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~--~~~~~~~~la~ 113 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSS-ADAHAALAVVFQT-EMEPKLADEEYRKALASDS--RNARVLNNYGG 113 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcCCCh-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHCc--CcHHHHHHHHH
Confidence 345677888889999999999999999876653 3444445555433 3444555555543322211 1111 111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccC
Q 044502 88 GYRHKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDL 167 (262)
Q Consensus 88 ~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L 167 (262)
-|.. ..--.+.+..++..+- ....+. ....+...|..|... |+ .+.|...|++|+...
T Consensus 114 ~~~~------~g~~~~A~~~~~~~~~-~~~~~~-~~~~~~~la~~~~~~-----g~-----~~~A~~~~~~~~~~~---- 171 (252)
T 2ho1_A 114 FLYE------QKRYEEAYQRLLEASQ-DTLYPE-RSRVFENLGLVSLQM-----KK-----PAQAKEYFEKSLRLN---- 171 (252)
T ss_dssp HHHH------TTCHHHHHHHHHHHTT-CTTCTT-HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHC----
T ss_pred HHHH------HhHHHHHHHHHHHHHh-CccCcc-cHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHhcC----
Confidence 1111 1112344444444332 111121 222223345544322 11 256778888887652
Q ss_pred CCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 168 PSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 168 ~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
|.+| ....+.+..++ ..|+.++|+...++++.
T Consensus 172 -~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~~~~ 203 (252)
T 2ho1_A 172 -RNQP---SVALEMADLLY-KEREYVPARQYYDLFAQ 203 (252)
T ss_dssp -SCCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred -cccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence 3332 23344444444 46888888887777643
No 58
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=77.53 E-value=42 Score=30.56 Aligned_cols=55 Identities=9% Similarity=0.027 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 149 AEQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 149 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
.+.|.+.|++|+++... . +.+|-....+++.-...|...|+.++|+...++++..
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 36789999999988643 2 3466553334444444455589999999998888754
No 59
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=77.26 E-value=11 Score=31.86 Aligned_cols=53 Identities=9% Similarity=0.021 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhh-hhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLG-LALNFSVFYYEIMNSPERACHLAKQAFDEA 206 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLg-LaLN~SVF~yEi~~~~~~A~~iak~afd~A 206 (262)
+.|...|++|+.+.. +..++.... +..|.+++|+. +|+.++|+..-++|++.+
T Consensus 132 ~~Ai~~~~~al~~~~---~~~~~~~~~~~~~~lg~~y~~-~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 132 EYCILELKKLLNQQL---TGIDVYQNLYIENAIANIYAE-NGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHHTCC---CCSCTTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc---ccccHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 568999999998653 223333333 34455555554 799999999999988644
No 60
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=76.96 E-value=32 Score=28.92 Aligned_cols=58 Identities=7% Similarity=-0.076 Sum_probs=39.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMS 68 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~ 68 (262)
..+..++.+..+.|+|++.+.++.+++..+|.. ..=...+..+|-. .+....|...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKH-MEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 457789999999999999999999999876653 4445555555433 233344444443
No 61
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=76.28 E-value=32 Score=28.47 Aligned_cols=168 Identities=13% Similarity=0.090 Sum_probs=86.0
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChh-hHHHHHHHH
Q 044502 12 VYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEH-NVKLIKGYR 90 (262)
Q Consensus 12 ~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~i~~yr 90 (262)
..+|.+....|+|++.+.++++++...|. +.+-...+..+|-. .+....+...+........ .+.. ......-|.
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~--~~~~~~~~la~~~~ 199 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIK-EGEPRKAISDLKAASKLKS--DNTEAFYKISTLYY 199 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCS--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHH
Confidence 44578899999999999999999987664 34445555555543 3555556666554332211 1111 111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhc--------cchhhhhhhcccchHHHHHHHHHHHHHHHHHHH
Q 044502 91 HKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMK--------GDYYRYLAEFKVDQERKEAAEQSLKGYEAASAT 162 (262)
Q Consensus 91 ~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~Kmk--------gDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~ 162 (262)
. . .--.+.+..+...+--...+.....+|.++. |..+. ..| -.+.|...|+++++.
T Consensus 200 ~-----~-~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~-----~~~~A~~~~~~~~~~ 263 (359)
T 3ieg_A 200 Q-----L-GDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELI-----RDG-----RYTDATSKYESVMKT 263 (359)
T ss_dssp H-----H-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHH-----HTT-----CHHHHHHHHHHHHHH
T ss_pred H-----c-CCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHH-----HcC-----CHHHHHHHHHHHHhc
Confidence 0 0 0111222222222211112222222332221 22221 111 135688888888765
Q ss_pred HhccCCCCCcchh-hhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 163 ANKDLPSTHPIRL-GLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 163 a~~~L~pt~pirL-gLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
. |.+|... .+..+.+..++. .|+.++|+...++++..
T Consensus 264 ~-----~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 264 E-----PSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM 301 (359)
T ss_dssp C-----CSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred C-----CCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 3 4455443 334455555554 79999999998888663
No 62
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=75.68 E-value=12 Score=26.03 Aligned_cols=53 Identities=9% Similarity=0.038 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+.+.. ..++.+|.......+.+..++. +|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 55 NKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 578899999998874 3445455445566677766665 7999999887766665
No 63
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=74.91 E-value=34 Score=28.77 Aligned_cols=51 Identities=8% Similarity=-0.065 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchh-hhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRL-GLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirL-gLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|..+|++|+++... .. +|... ....|.+.++.. +|+.++|+...+++..
T Consensus 135 ~~A~~~~~~Al~~~~~-~~--~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 135 AKAIDCYELAGEWYAQ-DQ--SVALSNKCFIKCADLKAL-DGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-CC--ChHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 6799999999998753 11 23222 244566676666 6999999987666554
No 64
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=74.87 E-value=10 Score=27.21 Aligned_cols=56 Identities=14% Similarity=0.126 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIA 208 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 208 (262)
+.|...|++|+.++.. .+ .+|.......|.+..++. .|+.++|+...+++++-+..
T Consensus 66 ~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 66 ETASEYYKKTLLLARQ-LK-DRAVEAQSCYSLGNTYTL-LQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHHHHHHHHHHHHHHH-TT-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC-CcHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHH
Confidence 5789999999999864 22 223334445555555554 79999999999998876543
No 65
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=74.85 E-value=38 Score=28.71 Aligned_cols=58 Identities=12% Similarity=0.235 Sum_probs=39.5
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMS 68 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~ 68 (262)
.-+..++.+..+.|+|++.+.++++++..+|.. ..-...+..+|.. .+....|...+.
T Consensus 100 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~ 157 (365)
T 4eqf_A 100 EAWQFLGITQAENENEQAAIVALQRCLELQPNN-LKALMALAVSYTN-TSHQQDACEALK 157 (365)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHc-cccHHHHHHHHH
Confidence 446678889999999999999999999887653 3444555555543 234444444443
No 66
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=74.47 E-value=12 Score=29.21 Aligned_cols=86 Identities=20% Similarity=0.091 Sum_probs=54.3
Q ss_pred CCHHHHHHHHHHHHH---cCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhh----hhhhhccChhhHHHHHHHHHHHH
Q 044502 22 ERYEEMVESMKKVAK---LGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIE----QKEESKGNEHNVKLIKGYRHKVE 94 (262)
Q Consensus 22 eRy~dm~~~mk~~i~---~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ie----qk~~~~~~~~~~~~i~~yr~kie 94 (262)
+|.+..++++|.-+. ++++||.|-|.=|.--.|...-.-|-|.|-+..-. .+....+ .+-.+-.+..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~plTEERRKeLVK~akk~aEeaKVAIRNIRRDAnd~lKKl~Kdk-----eISEDe~kr~e 85 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTGGGGTEERRKDLVKIVRGEAEGGRVAVRNIARDAANDLAALGKDK-----EVNWFDISQAL 85 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCT-----TSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhcC-----CCCHHHHHhHH
Confidence 567777888876653 58999999999999888887777777777664210 0100001 11133445566
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 044502 95 EELSKICGDILTIIDKHL 112 (262)
Q Consensus 95 ~EL~~~C~eii~lId~~L 112 (262)
++|..+.+..+.-||..|
T Consensus 86 ~eIQKLTDkyIkkID~ll 103 (121)
T 3lf9_A 86 WEIQKLTDVAVKKIDEVL 103 (121)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666666666666666554
No 67
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=74.32 E-value=31 Score=27.51 Aligned_cols=56 Identities=11% Similarity=0.019 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHH
Q 044502 10 THVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIM 67 (262)
Q Consensus 10 ~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l 67 (262)
-+..++.+....|+|++.+.++++++..+|. +.+=...+..+|-. .+....|.+.+
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~-~~~~~~A~~~~ 100 (275)
T 1xnf_A 45 LLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQ-AGNFDAAYEAF 100 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHH-ccCHHHHHHHH
Confidence 3455666666677777777777777766554 23334444444432 23333444444
No 68
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=72.97 E-value=26 Score=29.79 Aligned_cols=51 Identities=6% Similarity=0.004 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 203 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~af 203 (262)
+.|...|++|+.+... .+. +| ..+.++.-.+..|-.+|+.++|+...++++
T Consensus 172 ~~A~~~~~~al~~~~~-~~~-~~-~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 172 DEAAASLQKEKSMYKE-MEN-YP-TCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHH-TTC-HH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH-cCC-hh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 5789999999999864 222 22 333233333444555799999988776654
No 69
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=72.66 E-value=30 Score=26.51 Aligned_cols=167 Identities=10% Similarity=-0.044 Sum_probs=84.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChh-hHHHHH
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEH-NVKLIK 87 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~i~ 87 (262)
.-+..++.+..+.|+|++.+.++++++...|.. .+-...+..+|-. .+....+...+....+... .+.. ......
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~--~~~~~~~~l~~ 84 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALKSDPKN-ELAWLVRAEIYQY-LKVNDKAQESFRQALSIKP--DSAEINNNYGW 84 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccc-hHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCC--CChHHHHHHHH
Confidence 345677888889999999999999999876653 3444445555432 3444555555543322211 1111 111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccC
Q 044502 88 GYRHKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDL 167 (262)
Q Consensus 88 ~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L 167 (262)
-|... ..--.+.+..++..+- ....+ .....+...|..|... |+ .+.|...|+++++..
T Consensus 85 ~~~~~-----~~~~~~A~~~~~~~~~-~~~~~-~~~~~~~~l~~~~~~~-----~~-----~~~A~~~~~~~~~~~---- 143 (225)
T 2vq2_A 85 FLCGR-----LNRPAESMAYFDKALA-DPTYP-TPYIANLNKGICSAKQ-----GQ-----FGLAEAYLKRSLAAQ---- 143 (225)
T ss_dssp HHHTT-----TCCHHHHHHHHHHHHT-STTCS-CHHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHS----
T ss_pred HHHHh-----cCcHHHHHHHHHHHHc-CcCCc-chHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHhC----
Confidence 11110 0001122333333221 11111 1222223445555332 11 256888888887652
Q ss_pred CCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 168 PSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 168 ~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
|.+| ....+.+..++ -.|+.++|+...++++..
T Consensus 144 -~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 144 -PQFP---PAFKELARTKM-LAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp -TTCH---HHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred -CCCc---hHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Confidence 3343 23344444444 479999999888877653
No 70
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=72.51 E-value=6.4 Score=35.06 Aligned_cols=53 Identities=15% Similarity=0.119 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHhcc-CCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKD-LPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 203 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~-L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~af 203 (262)
+.|.++|++|+++.+.. ....||-.+...-|.+.-|+. +|+.++|+...+++.
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~ 121 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVK 121 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHH
Confidence 57999999999998643 344577777667788877776 799999987766654
No 71
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=71.86 E-value=49 Score=28.64 Aligned_cols=53 Identities=8% Similarity=0.207 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 206 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~A 206 (262)
+.|...|++|+++++.. .+|.......|.+..++. +|+.++|+...++|+.-+
T Consensus 239 ~~A~~~~~~al~~~~~~---~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 239 QMAVEHFQKAAKVSREK---VPDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDHI 291 (378)
T ss_dssp HHHHHHHHHHHHHHHHH---CGGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhh---CChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 67999999999998754 344444445555655554 799999998877776543
No 72
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=71.75 E-value=8.4 Score=28.50 Aligned_cols=52 Identities=8% Similarity=0.010 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 203 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~af 203 (262)
+.|...|++|+++.. ..++.++.+-....|.+..+ .-+|+.++|++.-++|+
T Consensus 59 ~~A~~~~~~al~~~~-~~~~~~~~~a~~~~~lg~~~-~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 59 AECVQFCEKAVEVGR-ETRADYKLIAKAMSRAGNAF-QKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-ccchhhHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHH
Confidence 578999999999975 34544444333444555554 45799999998655554
No 73
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=71.54 E-value=37 Score=27.12 Aligned_cols=45 Identities=16% Similarity=0.114 Sum_probs=33.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHh
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYK 54 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayK 54 (262)
+-+..++.+..+.|+|++.+.++++++..+|.. .+=...+..+|.
T Consensus 40 ~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~-~~a~~~lg~~~~ 84 (217)
T 2pl2_A 40 EALYWLARTQLKLGLVNPALENGKTLVARTPRY-LGGYMVLSEAYV 84 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHHH
Confidence 445678899999999999999999999988764 334444554443
No 74
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=71.51 E-value=40 Score=27.52 Aligned_cols=59 Identities=10% Similarity=0.043 Sum_probs=36.6
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSS 69 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ 69 (262)
.-+..++.+..+.|+|++.+.++++++..+|.. .+-...+..+|- ..+....|.+.+..
T Consensus 56 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~la~~~~-~~~~~~~A~~~~~~ 114 (327)
T 3cv0_A 56 EAWRSLGLTQAENEKDGLAIIALNHARMLDPKD-IAVHAALAVSHT-NEHNANAALASLRA 114 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH-HTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCC-HHHHHHHHHHHH-HcCCHHHHHHHHHH
Confidence 345567788888888888888888888776543 334444555542 23444445444433
No 75
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=71.27 E-value=11 Score=25.78 Aligned_cols=45 Identities=11% Similarity=0.185 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 203 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~af 203 (262)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++|+
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 5788999999865 34454 344566666665 799999988776665
No 76
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=71.15 E-value=35 Score=26.73 Aligned_cols=43 Identities=14% Similarity=0.102 Sum_probs=31.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGY 53 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvay 53 (262)
+.+..++.+.-+.|+|++.+.++.+++..+ -+..=...+..+|
T Consensus 6 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~ 48 (258)
T 3uq3_A 6 DKEKAEGNKFYKARQFDEAIEHYNKAWELH--KDITYLNNRAAAE 48 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhh--ccHHHHHHHHHHH
Confidence 456678888888899999999999988776 3344444555544
No 77
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=69.68 E-value=15 Score=30.90 Aligned_cols=190 Identities=13% Similarity=0.045 Sum_probs=92.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH-----hhhhhhhHHHHHHHHh-hhhhhhhccChhh
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGY-----KNVIGARRASWRIMSS-IEQKEESKGNEHN 82 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvay-----Kn~i~~~R~s~R~l~~-ieqk~~~~~~~~~ 82 (262)
+.+...+...-..|+|++++.++++.++..+.. .+....+..-| -...+....|...+.. ++..... .+...
T Consensus 76 ~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~ 153 (293)
T 2qfc_A 76 KQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYH-PEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTG-IDVYQ 153 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCC-HHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCS-SCTTH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhccccCC-hhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcC-CchHH
Confidence 344566777777899999999999988876553 33222221111 1112233344444432 1111110 11110
Q ss_pred -H----HHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHH
Q 044502 83 -V----KLIKGYR-HKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGY 156 (262)
Q Consensus 83 -~----~~i~~yr-~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY 156 (262)
. ....-|. ..=-++-...++..+.+.+. .|. +....+..+-..|..|..+-+ -+.|...|
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~--~~~--~~~~~~~~~~nlg~~y~~~~~----------y~~Al~~~ 219 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEA--LHD--NEEFDVKVRYNHAKALYLDSR----------YEESLYQV 219 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SCC--CHHHHHHHHHHHHHHHHHTTC----------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cCc--cccchHHHHHhHHHHHHHHhh----------HHHHHHHH
Confidence 0 1111111 11112334555566655543 231 111111122234555532211 25799999
Q ss_pred HHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchHh
Q 044502 157 EAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKD 220 (262)
Q Consensus 157 ~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~d 220 (262)
++|++++.. ..++..++.+++.--..|.-+|+.++|+. ..|+.|+.-.+.++...+++
T Consensus 220 ~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~---~~~~~Al~~~~~~~~~~~~~ 277 (293)
T 2qfc_A 220 NKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIE---DAYKKASFFFDILEMHAYKE 277 (293)
T ss_dssp HHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHH---HHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHH---HHHHHHHHHHHHhCcHhhHH
Confidence 999999853 23444566555555555666899999942 23444444445555555543
No 78
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=69.24 E-value=52 Score=27.84 Aligned_cols=53 Identities=11% Similarity=0.006 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchh-hhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRL-GLALNFSVFYYEIMNSPERACHLAKQAFDEA 206 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirL-gLaLN~SVF~yEi~~~~~~A~~iak~afd~A 206 (262)
+.|...|++|+++... . .+|... ....|.+.+|.. +|+.++|+...++|+.-.
T Consensus 132 ~~A~~~~~~Al~~~~~-~--~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 132 SKAVHLYQQAAAVFEN-E--ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSMY 185 (307)
T ss_dssp HHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-C--CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 5799999999999864 2 123333 345566666665 799999999888877643
No 79
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=69.13 E-value=16 Score=24.02 Aligned_cols=46 Identities=15% Similarity=0.278 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+.+. |.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~a~~~~-----~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 26 DEAIEYYQKALELD-----PNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC-----CCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 56888999998652 3443 344566666554 7999999988777765
No 80
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=68.58 E-value=12 Score=28.67 Aligned_cols=74 Identities=11% Similarity=-0.019 Sum_probs=48.1
Q ss_pred hhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHH
Q 044502 121 ATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAK 200 (262)
Q Consensus 121 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak 200 (262)
..+..+-..|..|...-. .+.|...|++|+.+++ ..+ .+|...+.+++.-...|--+|++++|+...+
T Consensus 64 ~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~-~~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 131 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGN----------WDAARRCFLEERELLA-SLP-EDPLAASANAYEVATVALHFGDLAGARQEYE 131 (203)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-HcC-ccHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 334444455666654432 2568999999999986 344 3454455544444444555899999999999
Q ss_pred HHHHHH
Q 044502 201 QAFDEA 206 (262)
Q Consensus 201 ~afd~A 206 (262)
+|+.-+
T Consensus 132 ~al~~~ 137 (203)
T 3gw4_A 132 KSLVYA 137 (203)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888654
No 81
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=68.53 E-value=14 Score=26.38 Aligned_cols=47 Identities=13% Similarity=0.198 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
+.|...|++|+++ .|.+ ..+..|++..++. +|+.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5788899998865 3444 3456677776665 69999999988888754
No 82
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=68.26 E-value=75 Score=31.47 Aligned_cols=136 Identities=13% Similarity=0.143 Sum_probs=79.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChhhHHHHHH
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKG 88 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~ 88 (262)
+-+..++.+..+.|+|++++.+++++++.+|+.. .+|-|+-... .. .++ ..+.+..
T Consensus 44 ~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~--------~a~~nLg~~l-----------~~---~g~--~~~A~~~ 99 (723)
T 4gyw_A 44 AAHSNLASVLQQQGKLQEALMHYKEAIRISPTFA--------DAYSNMGNTL-----------KE---MQD--VQGALQC 99 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--------HHHHHHHHHH-----------HH---TTC--HHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH--------HHHHHHHHHH-----------HH---cCC--HHHHHHH
Confidence 3456788999999999999999999999888752 2333322211 00 011 2244555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccCC
Q 044502 89 YRHKVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDLP 168 (262)
Q Consensus 89 yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~ 168 (262)
|++-|+ +-|.. ..+++ ..|..|+-+ |. .+.|..+|++|+++ .
T Consensus 100 ~~kAl~-----------------l~P~~----~~a~~--~Lg~~~~~~-----g~-----~~eAi~~~~~Al~l-----~ 141 (723)
T 4gyw_A 100 YTRAIQ-----------------INPAF----ADAHS--NLASIHKDS-----GN-----IPEAIASYRTALKL-----K 141 (723)
T ss_dssp HHHHHH-----------------HCTTC----HHHHH--HHHHHHHHT-----TC-----HHHHHHHHHHHHHH-----C
T ss_pred HHHHHH-----------------hCCCC----HHHHH--HHHHHHHHc-----CC-----HHHHHHHHHHHHHh-----C
Confidence 544332 12321 11222 234444322 11 35799999999865 3
Q ss_pred CCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 044502 169 STHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAEL 210 (262)
Q Consensus 169 pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~l 210 (262)
|.+|- ...|.+. .|..+|+.++|++..+++..-.-..+
T Consensus 142 P~~~~---a~~~L~~-~l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 142 PDFPD---AYCNLAH-CLQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp SCCHH---HHHHHHH-HHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred CCChH---HHhhhhh-HHHhcccHHHHHHHHHHHHHhChhHH
Confidence 55542 3344444 34457999999998888877665544
No 83
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=66.86 E-value=39 Score=25.50 Aligned_cols=46 Identities=15% Similarity=0.040 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 4678888888765 34443 345566666665 6999998887766654
No 84
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=66.64 E-value=18 Score=24.32 Aligned_cols=46 Identities=15% Similarity=0.098 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+++. |.+ .....+.+..++. .|+.++|+...++++.
T Consensus 23 ~~A~~~~~~a~~~~-----~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 23 TESIDLFEKAIQLD-----PEE---SKYWLMKGKALYN-LERYEEAVDCYNYVIN 68 (112)
T ss_dssp HHHHHHHHHHHHHC-----CCC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----cCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 56888999988653 333 3345667776665 6999999887777654
No 85
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=66.50 E-value=30 Score=24.07 Aligned_cols=72 Identities=15% Similarity=0.059 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchHhHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLR 229 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqLLr 229 (262)
+.|...|++|+++. |.+|. ...+.+..|+ -+|+.++|+...++|+.-+-..- ...-...+.++|+
T Consensus 24 ~~A~~~~~~al~~~-----p~~~~---a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~~~------~~~~~~~l~~~l~ 88 (100)
T 3ma5_A 24 SRALALFEELVETD-----PDYVG---TYYHLGKLYE-RLDRTDDAIDTYAQGIEVAREEG------TQKDLSELQDAKL 88 (100)
T ss_dssp HHHHHHHHHHHHHS-----TTCTH---HHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHS------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----CCcHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhcCC------chhHHHHHHHHHH
Confidence 57888999998653 44442 4455555554 47999999998888877654321 1233445556666
Q ss_pred hhHhhhc
Q 044502 230 DNLTLWT 236 (262)
Q Consensus 230 DNL~lW~ 236 (262)
..=..|.
T Consensus 89 ~~~~~~~ 95 (100)
T 3ma5_A 89 KAEGLEH 95 (100)
T ss_dssp HHHTTC-
T ss_pred Hcccccc
Confidence 5544443
No 86
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=66.28 E-value=44 Score=25.99 Aligned_cols=59 Identities=10% Similarity=-0.038 Sum_probs=24.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSS 69 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ 69 (262)
..+..++...-+.|+|++.+.++++++..+|.- .+-...+..+|- ..+....+.+.+..
T Consensus 24 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~-~~~~~~la~~~~-~~~~~~~A~~~~~~ 82 (243)
T 2q7f_A 24 MTGGQQMGRGSEFGDYEKAAEAFTKAIEENKED-AIPYINFANLLS-SVNELERALAFYDK 82 (243)
T ss_dssp ------------------CCTTHHHHHTTCTTC-HHHHHHHHHHHH-HTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHhCccc-HHHHHHHHHHHH-HcCCHHHHHHHHHH
Confidence 345667888888999999999999999866543 444444554443 24445555555544
No 87
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=65.89 E-value=27 Score=26.29 Aligned_cols=47 Identities=11% Similarity=0.100 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
+.|...|++|+.+ .|.+| ....|.+..|+. +|+.++|+...++++.-
T Consensus 62 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 62 EKAAEDAELATVV-----DPKYS---KAWSRLGLARFD-MADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 4667777777655 23343 344555555554 68888888766666543
No 88
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=65.63 E-value=22 Score=25.04 Aligned_cols=49 Identities=14% Similarity=0.092 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++++.. .|.+|......++.+..++. +|+.++|+...++++.
T Consensus 56 ~~A~~~~~~~~~~-----~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 56 QLAEAQFRDLVSR-----YPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688888888754 46676655556666666664 7999999987766654
No 89
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=65.62 E-value=14 Score=31.74 Aligned_cols=55 Identities=13% Similarity=0.055 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
+.|...|++|+.++...-.+.+|.......|.+..+++ .|+.++|.....+++.-
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEV 164 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Confidence 46888999999888654444456555555666766665 58888888888777653
No 90
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=65.53 E-value=53 Score=26.58 Aligned_cols=50 Identities=12% Similarity=0.143 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhh--------------hhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 149 AEQSLKGYEAASATANKDLPSTHPIRLGLA--------------LNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 149 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLa--------------LN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
.+.|...|++++.. .|.+|...... ++.+..|+. .|+.++|+...++++.
T Consensus 113 ~~~A~~~~~~~l~~-----~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~ 176 (261)
T 3qky_A 113 TRKAIEAFQLFIDR-----YPNHELVDDATQKIRELRAKLARKQYEAARLYER-RELYEAAAVTYEAVFD 176 (261)
T ss_dssp HHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 36788888888754 35565443332 666776665 6999999998877754
No 91
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=64.56 E-value=22 Score=24.10 Aligned_cols=47 Identities=15% Similarity=0.098 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|++. .|.+|.. ...+.+..|+. +|+.++|+...++++.
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 5688888888764 3445420 45666766665 6999999887777664
No 92
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=64.08 E-value=57 Score=28.32 Aligned_cols=32 Identities=9% Similarity=-0.030 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCC
Q 044502 10 THVYMAKLAEQAERYEEMVESMKKVAKLGCEM 41 (262)
Q Consensus 10 ~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~L 41 (262)
-+..++.+..+.|+|++.+.++++++...+..
T Consensus 149 ~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~ 180 (336)
T 1p5q_A 149 IVKERGTVYFKEGKYKQALLQYKKIVSWLEYE 180 (336)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHhhcc
Confidence 45567888888999999999999999876654
No 93
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=63.30 E-value=58 Score=26.28 Aligned_cols=28 Identities=7% Similarity=0.208 Sum_probs=23.7
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHHc
Q 044502 10 THVYMAKLAEQAERYEEMVESMKKVAKL 37 (262)
Q Consensus 10 ~l~~~Aklaeq~eRy~dm~~~mk~~i~~ 37 (262)
-+..++.+....|+|++.+.++++++..
T Consensus 71 ~~~~la~~~~~~g~~~~A~~~~~~al~~ 98 (311)
T 3nf1_A 71 MLNILALVYRDQNKYKDAANLLNDALAI 98 (311)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3557888888899999999999998865
No 94
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=63.23 E-value=22 Score=28.73 Aligned_cols=53 Identities=13% Similarity=0.181 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhh-----hhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLG-----LALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLg-----LaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|..+|++|+++.-. .|+..++.+. +-.|-+.-+.. +|+.++|+.-+.+|+.
T Consensus 28 eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 28 DEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 6799999999999753 3333343333 56666665555 7999999998777765
No 95
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=62.80 E-value=73 Score=27.23 Aligned_cols=32 Identities=9% Similarity=0.237 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCC
Q 044502 10 THVYMAKLAEQAERYEEMVESMKKVAKLGCEM 41 (262)
Q Consensus 10 ~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~L 41 (262)
-+..++.+..+.|+|++.+.++++++..+|..
T Consensus 69 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 100 (388)
T 1w3b_A 69 AYSNLGNVYKERGQLQEAIEHYRHALRLKPDF 100 (388)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHcCcch
Confidence 35566777777777777777777777666554
No 96
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.41 E-value=14 Score=26.49 Aligned_cols=49 Identities=20% Similarity=0.168 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+. +.|.+|....+..+.+..++. +|+.++|+...++++.
T Consensus 45 ~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~ 93 (148)
T 2dba_A 45 GGALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIE 93 (148)
T ss_dssp HHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 356667776653 344554445555666665554 5777777777766654
No 97
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=61.95 E-value=59 Score=25.91 Aligned_cols=62 Identities=6% Similarity=-0.048 Sum_probs=41.5
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCC--CCHHHHHHHHHHHhhhhhhhHHHHHHHHhhh
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCE--MTVEERNLLSVGYKNVIGARRASWRIMSSIE 71 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~--Lt~eERnLLsvayKn~i~~~R~s~R~l~~ie 71 (262)
+.+..+|...-+.|+|++++..+++++...|. ...+-...+..+|-. .+....|...+..+.
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l 68 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFI 68 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHH
Confidence 34566788888999999999999999987654 334445555555432 355555665555443
No 98
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=61.45 E-value=45 Score=24.38 Aligned_cols=164 Identities=15% Similarity=0.060 Sum_probs=78.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChh-hHHHHH
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEH-NVKLIK 87 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~i~ 87 (262)
.-+..++.+..+.|+|++.+..+++++...+.- ..-...+..+|- ..+....+...+....+... .+.. ......
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~--~~~~~~~~~a~ 84 (186)
T 3as5_A 9 VYYRDKGISHAKAGRYSQAVMLLEQVYDADAFD-VDVALHLGIAYV-KTGAVDRGTELLERSLADAP--DNVKVATVLGL 84 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCC-HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccC-hHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCC--CCHHHHHHHHH
Confidence 344567888888899999999998888765542 333334444432 23444445444443222211 1111 111111
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhcc
Q 044502 88 GYRH-KVEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKD 166 (262)
Q Consensus 88 ~yr~-kie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~ 166 (262)
-|.. .=-++-...+..++.+ -|. + ..++ ...|..|.-. |+ .+.|...|++++...
T Consensus 85 ~~~~~~~~~~A~~~~~~~~~~-----~~~--~--~~~~--~~~a~~~~~~-----~~-----~~~A~~~~~~~~~~~--- 140 (186)
T 3as5_A 85 TYVQVQKYDLAVPLLIKVAEA-----NPI--N--FNVR--FRLGVALDNL-----GR-----FDEAIDSFKIALGLR--- 140 (186)
T ss_dssp HHHHHTCHHHHHHHHHHHHHH-----CTT--C--HHHH--HHHHHHHHHT-----TC-----HHHHHHHHHHHHHHC---
T ss_pred HHHHhcCHHHHHHHHHHHHhc-----CcH--h--HHHH--HHHHHHHHHc-----Cc-----HHHHHHHHHHHHhcC---
Confidence 1110 0001112222222221 121 1 1121 2234333221 11 256888888887653
Q ss_pred CCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 044502 167 LPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 206 (262)
Q Consensus 167 L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~A 206 (262)
|.+| ....+.+..++ -.|+.++|+...++++...
T Consensus 141 --~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 141 --PNEG---KVHRAIAFSYE-QMGRHEEALPHFKKANELD 174 (186)
T ss_dssp --TTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHH
T ss_pred --ccch---HHHHHHHHHHH-HcCCHHHHHHHHHHHHHcC
Confidence 3333 33345555444 4799999998888876543
No 99
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=61.16 E-value=23 Score=25.16 Aligned_cols=46 Identities=15% Similarity=0.060 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+.+. |.+| .+..|.+..++. +|+.++|+...++|+.
T Consensus 21 ~~A~~~~~~al~~~-----p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 21 PNAVKAYTEMIKRA-----PEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----CCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 45666777766542 3333 334444444443 5777777766666543
No 100
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=60.93 E-value=62 Score=25.79 Aligned_cols=48 Identities=4% Similarity=-0.213 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCC---hHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNS---PERACHLAKQAFDEA 206 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~---~~~A~~iak~afd~A 206 (262)
+.|...|++|+++. |.+| ...++.+..++ .+++ .++|+...+++++-.
T Consensus 159 ~~A~~~~~~a~~~~-----p~~~---~~~~~~~~~~~-~~~~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 159 VKADSSFVKVLELK-----PNIY---IGYLWRARANA-AQDPDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp HHHHHHHHHHHHHS-----TTCH---HHHHHHHHHHH-HHSTTCSSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----ccch---HHHHHHHHHHH-HcCcchhhHHHHHHHHHHHHHH
Confidence 56778888887653 3443 22233333333 3466 666777666665544
No 101
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=60.71 E-value=23 Score=26.09 Aligned_cols=46 Identities=11% Similarity=0.047 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+++ .|.+| ....|.+..++. +|+.++|+..-++|+.
T Consensus 64 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 64 QRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 5688999999865 34444 344555665554 7999999886666553
No 102
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=59.03 E-value=50 Score=24.17 Aligned_cols=48 Identities=17% Similarity=0.112 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 206 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~A 206 (262)
+.|..+|++|+.+ .|.+|. ..+|.+..++. +|+.++|+...++++.-.
T Consensus 69 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 69 EQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 5689999999865 356653 34566665555 799999998877776544
No 103
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=58.85 E-value=28 Score=24.23 Aligned_cols=47 Identities=17% Similarity=0.058 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
+.|...|++|+.+ .|.+| ....+.+..++ -+|+.++|+...++++..
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALE-AMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHH-HHhhHHHHHHHHHHHHHh
Confidence 5688889988865 23343 34455666555 479999998887776643
No 104
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=57.74 E-value=29 Score=24.70 Aligned_cols=15 Identities=33% Similarity=0.514 Sum_probs=7.4
Q ss_pred hCChHHHHHHHHHHH
Q 044502 189 MNSPERACHLAKQAF 203 (262)
Q Consensus 189 ~~~~~~A~~iak~af 203 (262)
+|+.++|+...++++
T Consensus 56 ~~~~~~A~~~~~~al 70 (137)
T 3q49_B 56 MQQPEQALADCRRAL 70 (137)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHH
Confidence 455555555444443
No 105
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=57.72 E-value=21 Score=20.75 Aligned_cols=26 Identities=31% Similarity=0.561 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044502 84 KLIKGYRHKVEEELSKICGDILTIID 109 (262)
Q Consensus 84 ~~i~~yr~kie~EL~~~C~eii~lId 109 (262)
+.++.||.+|.+.|..+.+.|-.++-
T Consensus 4 krlrkfrnkikeklkkigqkiqgllp 29 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLP 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 45788999999999999998877664
No 106
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=57.04 E-value=65 Score=24.86 Aligned_cols=32 Identities=6% Similarity=-0.140 Sum_probs=25.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCC
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCE 40 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~ 40 (262)
+.+..++....+.++|++.+.++++++...+.
T Consensus 39 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~ 70 (198)
T 2fbn_A 39 FDIKEEGNEFFKKNEINEAIVKYKEALDFFIH 70 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 34567788888899999999999999976443
No 107
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=56.70 E-value=27 Score=26.47 Aligned_cols=46 Identities=13% Similarity=0.237 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|..+|++|+++ .|.|| ....+.+..|+. +|+.++|+...+++..
T Consensus 22 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 22 DGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 5789999999865 34554 233444444444 6888888887777643
No 108
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=56.60 E-value=31 Score=24.46 Aligned_cols=48 Identities=6% Similarity=-0.038 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 206 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~A 206 (262)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.-.
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 5689999999866 34443 344555555554 799999999888887654
No 109
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=56.59 E-value=46 Score=23.00 Aligned_cols=57 Identities=7% Similarity=0.011 Sum_probs=40.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHH
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIM 67 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l 67 (262)
.-+..++.+..+.|+|++.+.++++++..+|.... =...+..+|.. .+..-.|...+
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-a~~~lg~~~~~-~g~~~~A~~~~ 64 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETDPDYVG-TYYHLGKLYER-LDRTDDAIDTY 64 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH-HHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHH-cCCHHHHHHHH
Confidence 34667899999999999999999999998887543 45556666543 23333444443
No 110
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=55.32 E-value=40 Score=23.53 Aligned_cols=49 Identities=12% Similarity=-0.082 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 207 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai 207 (262)
+.|...|++|+.+ .|.++ ....+.+..|.. +|+.++|+...++++...-
T Consensus 36 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 36 DAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhcc
Confidence 5688999999865 34443 234555655554 7999999998888776543
No 111
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=54.83 E-value=30 Score=26.12 Aligned_cols=47 Identities=9% Similarity=0.006 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
+.|..+|++|+.+ .|.+|. ..+|.++.|+. +|+.++|+...++|+.-
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 5789999999865 355653 34666666665 79999998766665543
No 112
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=54.34 E-value=67 Score=24.20 Aligned_cols=56 Identities=13% Similarity=-0.056 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIA 208 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 208 (262)
+.|...|++|+.++.. . .+|...+.++..-...|.-.|+.++|+...++|++-+-.
T Consensus 124 ~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 124 AGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp HHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 5789999999999853 2 345555555555555555689999999888887776543
No 113
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=53.02 E-value=55 Score=22.76 Aligned_cols=58 Identities=9% Similarity=0.132 Sum_probs=41.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMS 68 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~ 68 (262)
.-+..++.+..+.|+|++.+.++++++..+|.. .+=...|..+|.. .+....|...+.
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~g~~~~A~~~~~ 77 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY-SVAWKWLGKTLQG-QGDRAGARQAWE 77 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc-HHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 445678889999999999999999999887764 3445556666654 344555555544
No 114
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=52.89 E-value=34 Score=22.98 Aligned_cols=45 Identities=7% Similarity=-0.096 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 203 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~af 203 (262)
+.|...|++|+++ .|.+| ....+.+..++ -+|+.++|+...++++
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~ 99 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALE-FLNRFEEAKRTYEEGL 99 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HHhhHHHHHHHHHHHH
Confidence 5678888888765 34443 34456665555 4799999988766654
No 115
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=52.29 E-value=42 Score=22.90 Aligned_cols=16 Identities=13% Similarity=0.065 Sum_probs=9.4
Q ss_pred hCChHHHHHHHHHHHH
Q 044502 189 MNSPERACHLAKQAFD 204 (262)
Q Consensus 189 ~~~~~~A~~iak~afd 204 (262)
.|+.++|+....+++.
T Consensus 59 ~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 59 LGNYAGAVQDCERAIC 74 (131)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred hhchHHHHHHHHHHHh
Confidence 4666666666555544
No 116
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=52.02 E-value=85 Score=24.66 Aligned_cols=61 Identities=8% Similarity=-0.031 Sum_probs=42.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhh
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIE 71 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ie 71 (262)
.-+..+|.+..+.|+|++.+.++++++..++.- ..-...+..+|-. .+....+.+.+....
T Consensus 72 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~la~~~~~-~g~~~~A~~~~~~~~ 132 (252)
T 2ho1_A 72 DAHAALAVVFQTEMEPKLADEEYRKALASDSRN-ARVLNNYGGFLYE-QKRYEEAYQRLLEAS 132 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc-HHHHHHHHHHHHH-HhHHHHHHHHHHHHH
Confidence 345678889999999999999999999887653 4444455555533 455556666665443
No 117
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=52.00 E-value=45 Score=22.33 Aligned_cols=47 Identities=19% Similarity=0.139 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 21 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 21 DDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 5688888888764 34443 344555555554 79999999988887654
No 118
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=51.69 E-value=40 Score=25.31 Aligned_cols=32 Identities=19% Similarity=0.180 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCC
Q 044502 10 THVYMAKLAEQAERYEEMVESMKKVAKLGCEM 41 (262)
Q Consensus 10 ~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~L 41 (262)
-...+|++..+.|+|++.+.+++++++.+|.-
T Consensus 33 ~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~ 64 (150)
T 4ga2_A 33 KGFYFAKLYYEAKEYDLAKKYICTYINVQERD 64 (150)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 34678999999999999999999999988764
No 119
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=51.68 E-value=44 Score=22.81 Aligned_cols=47 Identities=13% Similarity=0.050 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
+.|...|++|+.+ .|.+| ....+.+..++ -+|+.++|+...++++..
T Consensus 63 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCERAICI-----DPAYS---KAYGRMGLALS-SLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CccCH---HHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 5688888888865 34443 23455555555 479999999887776653
No 120
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=51.54 E-value=17 Score=26.11 Aligned_cols=31 Identities=10% Similarity=0.030 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHHcCCC
Q 044502 10 THVYMAKLAEQAERYEEMVESMKKVAKLGCE 40 (262)
Q Consensus 10 ~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~ 40 (262)
-+++++.++.+.|+|++.+.+..++.+.+|+
T Consensus 45 A~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 45 ALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 4556677777777777777777777766665
No 121
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=51.39 E-value=30 Score=29.11 Aligned_cols=53 Identities=9% Similarity=-0.025 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
+.|..+|++|+++... +. +|...+.+++-.-..|.-+|++++|+...++|+.-
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l 106 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQI 106 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 5799999999999753 32 55555556655555666789999999988887654
No 122
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=51.38 E-value=79 Score=25.04 Aligned_cols=47 Identities=11% Similarity=0.032 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 149 AEQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 149 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
.+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 93 ~~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 93 FDAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 35688888888765 33443 233444444444 7999999988888775
No 123
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=50.70 E-value=36 Score=26.32 Aligned_cols=46 Identities=13% Similarity=0.077 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|..+|++|+.+ .|.+|. ...|.++.|.. +|+.++|+..-++|+.
T Consensus 87 ~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 87 QQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5799999999865 355653 45566666664 7999999886666554
No 124
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=50.66 E-value=41 Score=24.42 Aligned_cols=47 Identities=6% Similarity=-0.182 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
+.|...|++|+.+. |.+| ....+.+..++. +|+.++|+...++++..
T Consensus 64 ~~A~~~~~~a~~~~-----~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 64 GYALGDATRAIELD-----KKYI---KGYYRRAASNMA-LGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----cccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 56888888888652 3443 344555555554 79999999888877653
No 125
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=50.28 E-value=29 Score=29.64 Aligned_cols=69 Identities=17% Similarity=0.136 Sum_probs=44.7
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhh----hhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 044502 39 CEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQ----KEESKGNEHNVKLIKGYRHKVEEELSKICGDILTIIDKHL 112 (262)
Q Consensus 39 ~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~L 112 (262)
|+||.|-|.=|....|...-.-|.+.|-+..--. +.+..+ .+-++-.++.+++|..+.+..+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~lKk~~K~~-----~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAG-----EITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999888888888887743111 100001 11134445666777777777777777654
No 126
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=49.62 E-value=42 Score=25.21 Aligned_cols=46 Identities=9% Similarity=0.125 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|.+.|++|+++ .|.||- .-.+.+..|+ -+|+.++|+..-++|+.
T Consensus 48 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDPK---AHRFLGLLYE-LEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHH-HcCchHHHHHHHHHHHH
Confidence 5788888888865 355542 3344444444 47999999887666654
No 127
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.51 E-value=46 Score=23.59 Aligned_cols=46 Identities=7% Similarity=-0.054 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 82 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 82 DKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688888888865 34443 334556665554 7999999887776654
No 128
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=49.46 E-value=53 Score=23.10 Aligned_cols=58 Identities=10% Similarity=0.038 Sum_probs=40.5
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMS 68 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~ 68 (262)
.-+..++.+..+.|+|++.+.++++++..+|.. .+=...+..+|-. .+....|...+.
T Consensus 28 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~ 85 (117)
T 3k9i_A 28 ECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH-QALRVFYAMVLYN-LGRYEQGVELLL 85 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 445678888999999999999999999987775 4444555555543 344445555443
No 129
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=49.02 E-value=79 Score=23.48 Aligned_cols=31 Identities=6% Similarity=0.074 Sum_probs=16.5
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHHcCCC
Q 044502 10 THVYMAKLAEQAERYEEMVESMKKVAKLGCE 40 (262)
Q Consensus 10 ~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~ 40 (262)
.+..++.+..+.|+|++.+.++.+++..+|.
T Consensus 13 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~ 43 (164)
T 3sz7_A 13 KLKSEGNAAMARKEYSKAIDLYTQALSIAPA 43 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc
Confidence 3444555555555555555555555554443
No 130
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=48.16 E-value=55 Score=22.05 Aligned_cols=46 Identities=15% Similarity=0.278 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+... |.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~~~~~~-----~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 26 DEAIEYYQKALELD-----PNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC-----cCcH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 45677777776542 2232 233344444443 5788887777666654
No 131
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=47.86 E-value=14 Score=33.14 Aligned_cols=54 Identities=19% Similarity=0.234 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHhcc--------CCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKD--------LPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~--------L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+.+.... ....+|....+.+|.+..|+. +|+.++|+..+++|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 56888888888865421 011466777778888887775 6899999888887764
No 132
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=47.20 E-value=72 Score=22.53 Aligned_cols=53 Identities=13% Similarity=0.041 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
..|..-|++|+......-. ..+.+-.+..++++-+| -+|+.++|+...++|+.
T Consensus 22 ~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHh
Confidence 4688889999887642211 12233344455555555 57999999998888764
No 133
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=46.69 E-value=51 Score=23.90 Aligned_cols=47 Identities=21% Similarity=0.086 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
+.|...|++|+.+. |.+ ..+..+.+..++. .|+.++|+...++++..
T Consensus 30 ~~A~~~~~~al~~~-----~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 76 (166)
T 1a17_A 30 ENAIKFYSQAIELN-----PSN---AIYYGNRSLAYLR-TECYGYALGDATRAIEL 76 (166)
T ss_dssp HHHHHHHHHHHHHS-----TTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----CCC---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 56888999988753 333 3344556655554 79999999988887653
No 134
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=46.44 E-value=61 Score=21.81 Aligned_cols=47 Identities=15% Similarity=0.249 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
+.|...|++++.+ .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 60 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 60 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALEL 106 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 4678888888765 23343 334566666655 69999998877776643
No 135
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=46.01 E-value=45 Score=31.82 Aligned_cols=47 Identities=23% Similarity=0.304 Sum_probs=30.9
Q ss_pred ccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccCCCCCcchhhhhhhh------HHHHHH
Q 044502 129 KGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDLPSTHPIRLGLALNF------SVFYYE 187 (262)
Q Consensus 129 kgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~------SVF~yE 187 (262)
-||..||...+ ..|...|.+|..+.=.+=.| -..||+.-.+ +||||-
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~P~~G~~--~nqLavla~~~~~~l~a~y~y~ 210 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLVPSNGQP--YNQLAILASSKGDHLTTIFYYC 210 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHCTTBSHH--HHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhCCCCCch--HHHHHHHHhcccccHHHHHHHH
Confidence 79999999764 57899999998765211111 1456655544 567663
No 136
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=45.54 E-value=1.3e+02 Score=25.06 Aligned_cols=50 Identities=14% Similarity=0.204 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+... .++|.++ ..+-.+|..|+.. .|+.+.|..+.+++..
T Consensus 220 ~~A~~~~~~al~~~--~l~p~~~--~~l~~~~~~~~~~-~g~~~~a~~~~~~a~~ 269 (308)
T 2ond_A 220 NNTRVLFERVLTSG--SLPPEKS--GEIWARFLAFESN-IGDLASILKVEKRRFT 269 (308)
T ss_dssp HHHHHHHHHHHHSS--SSCGGGC--HHHHHHHHHHHHH-HSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc--CCCHHHH--HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 57899999997542 3555432 3456777777766 6999999876666553
No 137
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=45.26 E-value=51 Score=26.52 Aligned_cols=95 Identities=15% Similarity=0.163 Sum_probs=56.8
Q ss_pred ccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccCCCCCc---chhhhhhhhHHHH----HHHhCChHHHHHHHHH
Q 044502 129 KGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDLPSTHP---IRLGLALNFSVFY----YEIMNSPERACHLAKQ 201 (262)
Q Consensus 129 kgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~p---irLgLaLN~SVF~----yEi~~~~~~A~~iak~ 201 (262)
.|..+.=+..+..+.+.....+.|..+|++|+++ .|.++ ..||.++.---|+ -+-.++.++|+.
T Consensus 42 ~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~---- 112 (158)
T 1zu2_A 42 WGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ---- 112 (158)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----
T ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHH----
Confidence 4556666777777777777889999999999866 34454 3455554322121 111245666665
Q ss_pred HHHHHHHhhccCCccchHhHHHHHHHHHhhHhhhcc
Q 044502 202 AFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 237 (262)
Q Consensus 202 afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNL~lW~~ 237 (262)
+|+.|+. ++ .+ +.+...-+++...+-.+|..
T Consensus 113 ~~~kAl~-l~---P~-~~~y~~al~~~~ka~el~~~ 143 (158)
T 1zu2_A 113 FFQQAVD-EQ---PD-NTHYLKSLEMTAKAPQLHAE 143 (158)
T ss_dssp HHHHHHH-HC---TT-CHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHH-hC---CC-CHHHHHHHHHHHhCHhccCc
Confidence 5666654 22 21 23345557777777777764
No 138
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=44.96 E-value=51 Score=25.35 Aligned_cols=46 Identities=13% Similarity=0.138 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+.+. |.+| ....|.+..|+. +|+.++|+...++++.
T Consensus 54 ~~A~~~~~~al~~~-----~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 54 TEAEKAFTRSINRD-----KHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----ccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 56889999998763 3443 445666666665 7999999998888876
No 139
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=44.89 E-value=1.7e+02 Score=26.12 Aligned_cols=59 Identities=14% Similarity=0.170 Sum_probs=39.4
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhh-hHHHHHHHH
Q 044502 8 RETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGA-RRASWRIMS 68 (262)
Q Consensus 8 re~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~-~R~s~R~l~ 68 (262)
.+-+.+++.+..+.|+|++.+..+.+++..+|.. ..=.+.+..+|... +. ...+...+.
T Consensus 97 ~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~-~~a~~~~g~~l~~~-g~d~~eAl~~~~ 156 (382)
T 2h6f_A 97 RDVYDYFRAVLQRDERSERAFKLTRDAIELNAAN-YTVWHFRRVLLKSL-QKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccC-HHHHHHHHHHHHHc-ccCHHHHHHHHH
Confidence 3456678888888999999999999999988874 33344444444432 32 444444443
No 140
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=44.52 E-value=1.7e+02 Score=26.08 Aligned_cols=44 Identities=7% Similarity=-0.022 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhh
Q 044502 11 HVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKN 55 (262)
Q Consensus 11 l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn 55 (262)
+..++.+..+.|+|++.+.++.+++..+|. +..=.+-+..+|..
T Consensus 203 ~~~lg~~~~~~g~~~eAl~~~~~al~l~P~-~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 203 WQHRQWVIQEFKLWDNELQYVDQLLKEDVR-NNSVWNQRYFVISN 246 (382)
T ss_dssp HHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH
Confidence 445666666677777777777777766655 23334444444444
No 141
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=44.34 E-value=30 Score=27.90 Aligned_cols=72 Identities=15% Similarity=0.123 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHh--ccCCCCCc-------chhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchHh
Q 044502 150 EQSLKGYEAASATAN--KDLPSTHP-------IRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKD 220 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~--~~L~pt~p-------irLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~d 220 (262)
+.|..+|.+|+++-. -.+.|.++ .++|.+|. -+|+.++|+.--++|+.-.= -+-..+++
T Consensus 74 ~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~-------~lgr~eEAl~~y~kAlel~p-----~d~~~~~~ 141 (159)
T 2hr2_A 74 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALD-------GLGRGAEAMPEFKKVVEMIE-----ERKGETPG 141 (159)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHH-------HTTCHHHHHHHHHHHHHHHH-----HCCSCCTT
T ss_pred HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHH-------HCCCHHHHHHHHHHHHhcCC-----CcHHHHHH
Confidence 468889999988722 24566554 34444443 48999999875555544322 23334555
Q ss_pred HHHHHHHHHhhHh
Q 044502 221 STLIMQLLRDNLT 233 (262)
Q Consensus 221 s~~IlqLLrDNL~ 233 (262)
...+.+.+.+.+.
T Consensus 142 ~~~~~~~~~~~~~ 154 (159)
T 2hr2_A 142 KERMMEVAIDRIA 154 (159)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5666666555443
No 142
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=44.32 E-value=51 Score=26.06 Aligned_cols=32 Identities=13% Similarity=0.105 Sum_probs=27.1
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHHcCC
Q 044502 8 RETHVYMAKLAEQAERYEEMVESMKKVAKLGC 39 (262)
Q Consensus 8 re~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~ 39 (262)
-+.++..+...-+.|+|++.+.++.+++..+|
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 35 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNI 35 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 35678888888899999999999999987654
No 143
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=44.23 E-value=46 Score=27.75 Aligned_cols=73 Identities=15% Similarity=0.202 Sum_probs=44.4
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 044502 39 CEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKGYRHKVEEELSKICGDILTIIDKHL 112 (262)
Q Consensus 39 ~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~L 112 (262)
|+||.|-|.=|....|...-..|.+.|-+..--.+. -+...+...+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~-lKk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1dd5_A 103 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKK-IKEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVF 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999998888888888888774211000 0000000011234445666777777777777776644
No 144
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=44.12 E-value=1.5e+02 Score=25.17 Aligned_cols=108 Identities=22% Similarity=0.302 Sum_probs=63.1
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChhhHHHHHHHHHH-
Q 044502 14 MAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKGYRHK- 92 (262)
Q Consensus 14 ~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yr~k- 92 (262)
.|+|.+....|-.|++-+|.-.. +..|..|.=.-||=-+... +.+. + . ...|++-..|
T Consensus 100 iarllekiqkyfQ~IEtlK~ql~-----nf~e~RLiYDHYKlKvdEL----------EK~~--K-d---SeKI~RNQsKL 158 (294)
T 3caz_A 100 IARLLEKIQKYRQEIEEIKKEYK-----ETDKYRERYDHYKVKLDNL----------EKKN--K-D---QERIERNQQKF 158 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH----------HHHT--C-C---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHhHHHH----------Hhcc--c-h---HHHHHHhHHHh
Confidence 47888888888888887765321 2345556656666554432 2211 1 1 1223333333
Q ss_pred --HHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhc
Q 044502 93 --VEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANK 165 (262)
Q Consensus 93 --ie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~ 165 (262)
-+.--..+|-|+|+-.+ ++-|.|||.++|..+. +=...--|-+|++.|..
T Consensus 159 ssAEtaYkqvcsDiInkMn-----------------kll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 159 KDAEAAYSSVCADLIQKME-----------------TVWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred hhHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 33445667777777665 4457899999987653 22334568888888753
No 145
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=44.09 E-value=1.9e+02 Score=26.50 Aligned_cols=32 Identities=6% Similarity=-0.104 Sum_probs=26.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCC
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCE 40 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~ 40 (262)
+-+..++.+..+.|+|++.+.+++++++.+|.
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 55 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLALHPG 55 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 34567788888889999999999999887665
No 146
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=42.36 E-value=48 Score=27.60 Aligned_cols=69 Identities=13% Similarity=0.129 Sum_probs=43.7
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhh----hhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 044502 39 CEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQ----KEESKGNEHNVKLIKGYRHKVEEELSKICGDILTIIDKHL 112 (262)
Q Consensus 39 ~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~L 112 (262)
|+||.|-|.=|....|...-..|.+.|-+..--. +.+..+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1ise_A 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALLKDK-----EISEDDDRRSQDDVQKLTDAAIKKIEAAL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999988888888888887742110 000000 11234445666677777777666666544
No 147
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=41.81 E-value=27 Score=32.08 Aligned_cols=52 Identities=13% Similarity=0.094 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAEL 210 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~l 210 (262)
+.|...|++|+.. +| ...+-+.|.-|..+..|+.+.|.+.+.++|+.|+..+
T Consensus 63 ~~a~~~~~ral~~--------~p-~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~ 114 (530)
T 2ooe_A 63 DKVEKLFQRCLMK--------VL-HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI 114 (530)
T ss_dssp HHHHHHHHHHTTT--------CC-CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc--------CC-ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC
Confidence 5688888888632 23 2457888888999999999999999999999998754
No 148
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=41.80 E-value=31 Score=31.59 Aligned_cols=53 Identities=15% Similarity=0.188 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHhccCCC--------CCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPS--------THPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~p--------t~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+.+... .+. .+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 285 ~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 285 MQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 5788899999877532 110 134567778888888776 6999999888877643
No 149
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=41.47 E-value=50 Score=27.47 Aligned_cols=69 Identities=19% Similarity=0.136 Sum_probs=43.9
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhh----hhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 044502 39 CEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQ----KEESKGNEHNVKLIKGYRHKVEEELSKICGDILTIIDKHL 112 (262)
Q Consensus 39 ~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~L 112 (262)
|+||.|-|.=|....|...-..|.+.|-+..--. +.+..+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1is1_A 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDK-----EISEDEDRKAQEEIQKLTDVAVKKIDEVL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999988888888888887742110 100001 11234445666677777777777666544
No 150
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=40.64 E-value=95 Score=25.77 Aligned_cols=70 Identities=16% Similarity=0.141 Sum_probs=46.0
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 044502 39 CEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKGYRHKVEEELSKICGDILTIIDKHL 112 (262)
Q Consensus 39 ~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~L 112 (262)
|+||.|-|.=|....|...-..|.+.|-+..--.+.-.+.. ++-++-.++.++++..+.+..+.-||..+
T Consensus 105 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~----kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 105 PPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEELE----GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST----TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999998888888888877431111100100 02244555677777777777777777654
No 151
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=40.37 E-value=49 Score=30.57 Aligned_cols=27 Identities=4% Similarity=-0.197 Sum_probs=14.3
Q ss_pred hhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 177 LALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 177 LaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
...|.+..|+. +|+.++|+...++|+.
T Consensus 76 ~~~~lg~~~~~-~g~~~eA~~~~~~al~ 102 (477)
T 1wao_1 76 GYYRRAASNMA-LGKFRAALRDYETVVK 102 (477)
T ss_dssp HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 33444444443 5677666665555543
No 152
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=40.28 E-value=54 Score=27.28 Aligned_cols=69 Identities=20% Similarity=0.163 Sum_probs=43.2
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhh----hhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 044502 39 CEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQ----KEESKGNEHNVKLIKGYRHKVEEELSKICGDILTIIDKHL 112 (262)
Q Consensus 39 ~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~L 112 (262)
|+||.|-|.=|..-.|...-..|.+.|-+..--. +.+..+ .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1wqg_A 103 PQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDELV 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999988888888888877742110 100001 01234445566666666666666666543
No 153
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=40.16 E-value=75 Score=23.09 Aligned_cols=47 Identities=9% Similarity=-0.009 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 205 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 205 (262)
+.|...|++++.. .|.+| ....+.+..++ -.|+.++|+...++++..
T Consensus 93 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 93 DLAVPLLIKVAEA-----NPINF---NVRFRLGVALD-NLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHH-HcCcHHHHHHHHHHHHhc
Confidence 5678888888765 23343 33455555555 479999999998887654
No 154
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=39.93 E-value=86 Score=21.27 Aligned_cols=41 Identities=10% Similarity=0.021 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Q 044502 10 THVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVG 52 (262)
Q Consensus 10 ~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsva 52 (262)
-+..++.+..+.|+|++.+.++++++...+ +.+-+..+..+
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~l~~~ 121 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHR--TPDVLKKCQQA 121 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCC--CHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCC--CHHHHHHHHHH
Confidence 455778888899999999999999998766 34444444443
No 155
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=39.53 E-value=48 Score=27.63 Aligned_cols=73 Identities=18% Similarity=0.185 Sum_probs=45.1
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 044502 39 CEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKGYRHKVEEELSKICGDILTIIDKHL 112 (262)
Q Consensus 39 ~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yr~kie~EL~~~C~eii~lId~~L 112 (262)
|+||.|-|.=|....|...-..|.+.|-+..--.+. -+...+...+-++-.++.++++..+.+..+.-||..+
T Consensus 104 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~-lKk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 104 PPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDK-LKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999998888888888888774211000 0000000011234455667777777777777777654
No 156
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=38.55 E-value=11 Score=28.11 Aligned_cols=62 Identities=11% Similarity=0.218 Sum_probs=39.5
Q ss_pred CcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccCCCCCcchhh----hhhhhHHHHH
Q 044502 118 SGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDLPSTHPIRLG----LALNFSVFYY 186 (262)
Q Consensus 118 ~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~pirLg----LaLN~SVF~y 186 (262)
++.+.+|+ .|+.--|+-.+...=+ .-+..+.+.++.|++--+ ..|.||..|+ +.-+|++|+-
T Consensus 3 ~~~~~~~~---~~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L~--~~psNPa~LAe~Qa~lseynl~RN 68 (92)
T 2g0u_A 3 NPPTPLLA---DYEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANLT--KNPSDPTALANYQMIMSEYNLYRN 68 (92)
T ss_dssp SCCCCCTT---SSSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHHH--HSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHh---cCcccchHHHHHHHHH--HHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34466777 4566667766654311 124456667777775543 6899999998 6667777653
No 157
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=38.23 E-value=84 Score=20.67 Aligned_cols=27 Identities=22% Similarity=0.275 Sum_probs=14.3
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHcCC
Q 044502 13 YMAKLAEQAERYEEMVESMKKVAKLGC 39 (262)
Q Consensus 13 ~~Aklaeq~eRy~dm~~~mk~~i~~~~ 39 (262)
.++.+..+.|+|++.+.++++++...+
T Consensus 11 ~~~~~~~~~~~~~~A~~~~~~a~~~~~ 37 (112)
T 2kck_A 11 LEGVLQYDAGNYTESIDLFEKAIQLDP 37 (112)
T ss_dssp GHHHHHHSSCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhCc
Confidence 344455555555555555555555443
No 158
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=37.69 E-value=47 Score=27.95 Aligned_cols=50 Identities=18% Similarity=0.127 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhc--cCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 044502 154 KGYEAASATANK--DLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 207 (262)
Q Consensus 154 ~aY~~A~~~a~~--~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai 207 (262)
.-|++|....+. .+.|.+ .....+.+..|+ -+|+.++|+...++|+.-.-
T Consensus 52 ~~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 52 QQPEQALADCRRALELDGQS---VKAHFFLGQCQL-EMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp TCHHHHHHHHHHHTTSCTTC---HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCc
Confidence 345666655543 334444 344455555554 47888888888888776543
No 159
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=36.87 E-value=2.4e+02 Score=25.52 Aligned_cols=162 Identities=13% Similarity=0.021 Sum_probs=75.4
Q ss_pred HHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhh-HHHHHHHHhhhhhhhhccChh-hHHHHHHHHHHHHHH
Q 044502 19 EQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGAR-RASWRIMSSIEQKEESKGNEH-NVKLIKGYRHKVEEE 96 (262)
Q Consensus 19 eq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~-R~s~R~l~~ieqk~~~~~~~~-~~~~i~~yr~kie~E 96 (262)
+..+++++.+..+.++... .+-..+-...+..+|-. .+.. ..|...+....+... .+.. ...+-.-|...
T Consensus 79 ~~~~~~~~al~~l~~~~~~-~~~~a~~~~~lg~~~~~-~g~~~~~A~~~~~~al~~~p--~~~~a~~~lg~~~~~~---- 150 (474)
T 4abn_A 79 DVQEEMEKTLQQMEEVLGS-AQVEAQALMLKGKALNV-TPDYSPEAEVLLSKAVKLEP--ELVEAWNQLGEVYWKK---- 150 (474)
T ss_dssp HHHHHHHHHHHHHHHHHTT-CCCCHHHHHHHHHHHTS-SSSCCHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHHHhcc-CchhHHHHHHHHHHHHh-ccccHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHHc----
Confidence 3345567777777766543 33555666666666543 3445 555555543222211 1111 11111111110
Q ss_pred HHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccCCCCCcchhh
Q 044502 97 LSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDLPSTHPIRLG 176 (262)
Q Consensus 97 L~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~pirLg 176 (262)
.--.+.+...+..|-- ++.. ..+...|..|+.+.. ....++..-.+.|...|++|+++ .|.+|.
T Consensus 151 --g~~~~A~~~~~~al~~---~p~~--~~~~~lg~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~-----~p~~~~--- 214 (474)
T 4abn_A 151 --GDVTSAHTCFSGALTH---CKNK--VSLQNLSMVLRQLQT-DSGDEHSRHVMDSVRQAKLAVQM-----DVLDGR--- 214 (474)
T ss_dssp --TCHHHHHHHHHHHHTT---CCCH--HHHHHHHHHHTTCCC-SCHHHHHHHHHHHHHHHHHHHHH-----CTTCHH---
T ss_pred --CCHHHHHHHHHHHHhh---CCCH--HHHHHHHHHHHHhcc-CChhhhhhhHHHHHHHHHHHHHh-----CCCCHH---
Confidence 1112333333333311 1222 344456776665422 11222333457899999999876 345542
Q ss_pred hhhhhHHHHHHH---h----CChHHHHHHHHHHHH
Q 044502 177 LALNFSVFYYEI---M----NSPERACHLAKQAFD 204 (262)
Q Consensus 177 LaLN~SVF~yEi---~----~~~~~A~~iak~afd 204 (262)
...|.+..|... . |+.++|+...++|+.
T Consensus 215 ~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 249 (474)
T 4abn_A 215 SWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEK 249 (474)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 233444444332 1 567777666665544
No 160
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=36.71 E-value=1.4e+02 Score=22.77 Aligned_cols=45 Identities=16% Similarity=-0.060 Sum_probs=30.9
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Q 044502 8 RETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGY 53 (262)
Q Consensus 8 re~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvay 53 (262)
-+-+..++.+..+.|+|++.+.++++++..+|. +.+=...|..+|
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~ 80 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIY 80 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHH
Confidence 345667777788888888888888888877664 344444555554
No 161
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=36.22 E-value=2e+02 Score=24.36 Aligned_cols=44 Identities=14% Similarity=0.049 Sum_probs=32.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGY 53 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvay 53 (262)
.-+..++.+.-+.+++++...+.+.++..+|. +.+-...+..+|
T Consensus 34 ~~~~~l~~~~~~~~~~~~a~~~~~~a~~~~p~-~~~~~~~lg~~~ 77 (388)
T 1w3b_A 34 GVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPL-LAEAYSNLGNVY 77 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHH
Confidence 44667788888999999999999998887665 344455555554
No 162
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=35.56 E-value=1.3e+02 Score=22.13 Aligned_cols=70 Identities=6% Similarity=-0.097 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCccchHhHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLR 229 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~~ld~l~ee~y~ds~~IlqLLr 229 (262)
+.|...|++|+.+ .|.+| ...++.+..|+. +|+.++|+...++|+.- +.+.-......+..++
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~l--------~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLRN--------HPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH--------CGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHH
Confidence 5688888888866 35554 344555555554 79999998876665543 2222223455555555
Q ss_pred hhHhhhc
Q 044502 230 DNLTLWT 236 (262)
Q Consensus 230 DNL~lW~ 236 (262)
.-+..+.
T Consensus 143 ~~~~~~~ 149 (162)
T 3rkv_A 143 ERRAEKK 149 (162)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 5555443
No 163
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=34.72 E-value=1.2e+02 Score=21.24 Aligned_cols=50 Identities=20% Similarity=0.119 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIA 208 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai~ 208 (262)
+.|...|++|+.+. |.+| ....+.+..++. +|+.++|+...++++.-.-.
T Consensus 60 ~~A~~~~~~al~~~-----p~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 60 EQALADCRRALELD-----GQSV---KAHFFLGQCQLE-MESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----chhH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHHChh
Confidence 46888999988653 3443 345556665555 79999999998888876544
No 164
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=34.41 E-value=76 Score=20.37 Aligned_cols=59 Identities=17% Similarity=0.171 Sum_probs=40.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSS 69 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ 69 (262)
.-+..++.+..+.++|++.+.++++++...|.- ..=...+..+|-. .+....+...+..
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~ 68 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-AEAWYNLGNAYYK-QGDYDEAIEYYQK 68 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 345678888899999999999999999876653 3444455555543 3445555555543
No 165
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=34.11 E-value=68 Score=21.40 Aligned_cols=29 Identities=7% Similarity=0.007 Sum_probs=18.6
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHcCCC
Q 044502 12 VYMAKLAEQAERYEEMVESMKKVAKLGCE 40 (262)
Q Consensus 12 ~~~Aklaeq~eRy~dm~~~mk~~i~~~~~ 40 (262)
+.+|...-+.|+|++.+..+++++..+|.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 32 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPV 32 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 34566666667777777777777665543
No 166
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=33.93 E-value=99 Score=20.79 Aligned_cols=46 Identities=15% Similarity=0.239 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|+++.... |.+| ....+.+..++ -.|+.++|+...++++.
T Consensus 52 ~~A~~~~~~~~~~~-----~~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~~~~ 97 (136)
T 2fo7_A 52 DEAIEYYQKALELD-----PRSA---EAWYNLGNAYY-KQGDYDEAIEYYQKALE 97 (136)
T ss_dssp HHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC-----CCch---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 46777788777542 3333 22334444444 46899998888777665
No 167
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=33.89 E-value=57 Score=27.44 Aligned_cols=46 Identities=11% Similarity=0.125 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+++. |.+ ..+.++++.|+.. .|+.++|+.+-.+|+.
T Consensus 186 ~~A~~~~~~al~~~-----p~~---~~~~~~~~~~~~~-~g~~~~A~~~~~~al~ 231 (308)
T 2ond_A 186 SVAFKIFELGLKKY-----GDI---PEYVLAYIDYLSH-LNEDNNTRVLFERVLT 231 (308)
T ss_dssp HHHHHHHHHHHHHH-----TTC---HHHHHHHHHHHHT-TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----CCc---HHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 56888999998753 334 3566888888765 6999998877666654
No 168
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=33.81 E-value=67 Score=24.63 Aligned_cols=53 Identities=11% Similarity=0.056 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhccC--------CCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDL--------PSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 203 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L--------~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~af 203 (262)
+.|...|++|+++...+- ...+|-......|.+..++. +|+.++|+...++|+
T Consensus 88 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al 148 (213)
T 1hh8_A 88 DLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALAT 148 (213)
T ss_dssp HHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence 568899999987542110 00233444556677776665 699999988766654
No 169
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=33.65 E-value=1.1e+02 Score=21.85 Aligned_cols=46 Identities=11% Similarity=-0.027 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+.+ .|.+| ..-.+.++.+.. +|+.++|+...++|+.
T Consensus 34 ~~A~~~~~~al~~-----~P~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 34 AEAALAFEAVCQK-----EPERE---EAWRSLGLTQAE-NEKDGLAIIALNHARM 79 (121)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688888888754 34444 233455555544 6999998887666554
No 170
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=33.42 E-value=94 Score=23.49 Aligned_cols=33 Identities=24% Similarity=0.179 Sum_probs=23.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCC
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEM 41 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~L 41 (262)
+-+..++.+..+.|+|++.+.++.+++..+|..
T Consensus 109 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 109 ELACELAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 344566777777777777777777777766654
No 171
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=32.24 E-value=1.4e+02 Score=21.53 Aligned_cols=32 Identities=13% Similarity=0.105 Sum_probs=19.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCC
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCE 40 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~ 40 (262)
+.+..++....+.|+|++.+.++++++..+|.
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~ 50 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDHY 50 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc
Confidence 34445566666667777777777766665543
No 172
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=31.82 E-value=1.4e+02 Score=21.29 Aligned_cols=58 Identities=10% Similarity=-0.024 Sum_probs=40.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMS 68 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~ 68 (262)
.....++...-+.|+|++.+..+++++..+|. +.+=...+..+|-. .+....|...+.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~-~g~~~~A~~~~~ 75 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAE-NEKDGLAIIALN 75 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 45677888888999999999999999988776 35555666666543 344444444443
No 173
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=30.43 E-value=63 Score=21.67 Aligned_cols=30 Identities=10% Similarity=0.012 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHHcCC
Q 044502 10 THVYMAKLAEQAERYEEMVESMKKVAKLGC 39 (262)
Q Consensus 10 ~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~ 39 (262)
.+..++.+.-..|+|++.+.++.+++..+|
T Consensus 6 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 35 (111)
T 2l6j_A 6 KQKEQGNSLFKQGLYREAVHCYDQLITAQP 35 (111)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 445556666666677777766666665543
No 174
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=30.28 E-value=91 Score=23.28 Aligned_cols=48 Identities=15% Similarity=0.162 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCCh--HHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSP--ERACHLAKQAFDE 205 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~--~~A~~iak~afd~ 205 (262)
+.|..+|++|+.+. |.+| ....+++..+|.-.|+. ++|+...++++..
T Consensus 61 ~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 61 SNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 57899999998764 3443 34556666656567887 9998887777643
No 175
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=30.13 E-value=1.6e+02 Score=21.46 Aligned_cols=78 Identities=8% Similarity=0.100 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhhhhh---hccChhhHHHHHHHHHHHHHHHHHH
Q 044502 24 YEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEE---SKGNEHNVKLIKGYRHKVEEELSKI 100 (262)
Q Consensus 24 y~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieqk~~---~~~~~~~~~~i~~yr~kie~EL~~~ 100 (262)
|...+.-+...+..-+.++-++|+-+......-+..-..-++.+. +|-+.- ..........++.||..+..+|..-
T Consensus 10 f~~~~~~i~~~l~~~~~~~ge~Rk~~i~~ie~~ldEA~ell~qMe-lE~~~~~~p~~~R~~~~~klr~Yk~dl~~~lk~~ 88 (97)
T 3onj_A 10 FKTTLEQAKASLAEAPSQPLSQRNTTLKHVEQQQDELFDLLDQMD-VEVNNSIGDASERATYKAKLREWKKTIQSDIKRP 88 (97)
T ss_dssp HHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444678889998887777777776655444442 222211 0112235678889988887766543
Q ss_pred HH
Q 044502 101 CG 102 (262)
Q Consensus 101 C~ 102 (262)
-.
T Consensus 89 lk 90 (97)
T 3onj_A 89 LQ 90 (97)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 176
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=27.94 E-value=1.5e+02 Score=22.58 Aligned_cols=59 Identities=15% Similarity=0.166 Sum_probs=41.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSS 69 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ 69 (262)
.-+..+|.+..+.|+|++++.++.+++..+|.. ..=...+..+|- ..+....|...+..
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~-~~~~~~~A~~~~~~ 147 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNN-VKALYKLGVANM-YFGFLEEAKENLYK 147 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-HHHHHHHHHHHH-HHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc-HHHHHHHHHHHH-HcccHHHHHHHHHH
Confidence 345578888889999999999999999886643 444555666653 34555556655544
No 177
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=27.75 E-value=2.1e+02 Score=22.09 Aligned_cols=59 Identities=12% Similarity=0.133 Sum_probs=39.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSS 69 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ 69 (262)
.-+..++.+..+.|+|++++.++.+++..+|. +..=...+..+|.. .+....|...+..
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~ 101 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRD-MKNNQEYIATLTE 101 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHH-cccHHHHHHHHHH
Confidence 34556888899999999999999999988776 33344455555533 2444555555543
No 178
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=27.13 E-value=1.9e+02 Score=24.06 Aligned_cols=33 Identities=18% Similarity=0.076 Sum_probs=25.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCC
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEM 41 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~L 41 (262)
+-...+|.+..+.|||++.+..+.+++..+|..
T Consensus 220 ~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 220 ALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 345567777788888888888888888777665
No 179
>2w9y_A CE-FAR-7, fatty acid/retinol binding protein protein 7, isoform A, confirmed by transcript...; lipid transport; HET: CSX; 1.80A {Caenorhabditis elegans}
Probab=27.10 E-value=19 Score=28.83 Aligned_cols=75 Identities=20% Similarity=0.231 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccch--HHHHHHHHHHHHHHHHHHHHhccCCCCCc
Q 044502 95 EELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQ--ERKEAAEQSLKGYEAASATANKDLPSTHP 172 (262)
Q Consensus 95 ~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~--~~~~~~~~A~~aY~~A~~~a~~~L~pt~p 172 (262)
.+|-.-...+.+.|...| .+-+++++.|.-+|.+-+---.++...|. +..++ ....+.|+.-.+-+++.|..+-|
T Consensus 60 p~L~~K~~~l~~~lk~Ki--~~L~Peak~Fv~kli~~~r~l~~~~~~G~k~~~~~l-K~~~~~ykaLS~~aK~dL~k~FP 136 (140)
T 2w9y_A 60 PELGKRLATVLEGNKKRL--DGLSPAAVEYAKKLIHMVTTTLCSLTVGKPIDDADA-KRLHQEFQSLSSEDQAALRKNNP 136 (140)
T ss_dssp HHHHHHHHHHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCTHHH-HHHHHHHHTSCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHH-HHHHHHHHcCCHHHHHHHHHhCc
Confidence 345555556677777776 45678999999999776655555544331 11111 12236666554445544444444
No 180
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=26.74 E-value=2e+02 Score=21.51 Aligned_cols=63 Identities=10% Similarity=-0.004 Sum_probs=43.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHhhhh
Q 044502 9 ETHVYMAKLAEQAERYEEMVESMKKVAKLGCEMTVEERNLLSVGYKNVIGARRASWRIMSSIEQ 72 (262)
Q Consensus 9 e~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~~Lt~eERnLLsvayKn~i~~~R~s~R~l~~ieq 72 (262)
.-+..++.+..+.|+|++.+.++.+++...|.. ..-...+..+|-...+....+...+....+
T Consensus 43 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 43 LAWLVRAEIYQYLKVNDKAQESFRQALSIKPDS-AEINNNYGWFLCGRLNRPAESMAYFDKALA 105 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHhcCcHHHHHHHHHHHHc
Confidence 345678888889999999999999999876653 444455555554432556666666655433
No 181
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=26.14 E-value=50 Score=28.79 Aligned_cols=49 Identities=16% Similarity=0.201 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCc--------------chhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHP--------------IRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~p--------------irLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
+.|...|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
No 182
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=26.13 E-value=87 Score=23.61 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHHHHcC-CCCCHHHHHHHHHHHhhhh
Q 044502 22 ERYEEMVESMKKVAKLG-CEMTVEERNLLSVGYKNVI 57 (262)
Q Consensus 22 eRy~dm~~~mk~~i~~~-~~Lt~eERnLLsvayKn~i 57 (262)
++|+.++..++.+-..+ ..++.+++-.|-.-||...
T Consensus 10 ~~F~~A~~~vk~l~~~g~~~ps~e~~L~LYaLyKQAt 46 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQAT 46 (106)
T ss_dssp HHHHHHHHHHHHSCSSCSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhhc
Confidence 56888888887754322 2688999988888888764
No 183
>3kfu_G Glutamyl-tRNA(Gln) amidotransferase subunit C; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=25.15 E-value=87 Score=22.76 Aligned_cols=18 Identities=28% Similarity=0.176 Sum_probs=11.4
Q ss_pred CCcchhhHHhHHHHHHHH
Q 044502 1 MSTTEKERETHVYMAKLA 18 (262)
Q Consensus 1 ~~~~~~~re~l~~~Akla 18 (262)
|..|+.+++++-..|+||
T Consensus 1 m~~M~i~~e~V~~iA~LA 18 (92)
T 3kfu_G 1 MPGMELSPELLRKLETLA 18 (92)
T ss_dssp ----CCCHHHHHHHHHHT
T ss_pred CCCCccCHHHHHHHHHHh
Confidence 566777888888888877
No 184
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=25.14 E-value=7.2e+02 Score=27.41 Aligned_cols=23 Identities=17% Similarity=0.115 Sum_probs=19.9
Q ss_pred hhHHHHHHHhCChHHHHHHHHHH
Q 044502 180 NFSVFYYEIMNSPERACHLAKQA 202 (262)
Q Consensus 180 N~SVF~yEi~~~~~~A~~iak~a 202 (262)
.-.|-+|+-.|..++||.+..+|
T Consensus 1284 eeli~yYe~~G~feEAI~LlE~a 1306 (1630)
T 1xi4_A 1284 EELINYYQDRGYFEELITMLEAA 1306 (1630)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Confidence 35567889999999999999988
No 185
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=25.07 E-value=1.8e+02 Score=27.99 Aligned_cols=57 Identities=18% Similarity=0.005 Sum_probs=36.6
Q ss_pred hhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccCCCCC-cchhhhhhhhHHHHHHHhC
Q 044502 132 YYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDLPSTH-PIRLGLALNFSVFYYEIMN 190 (262)
Q Consensus 132 yyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~-pirLgLaLN~SVF~yEi~~ 190 (262)
++-=.||....+.-.+..++|.++|++|++..++ +..|+ |--.-..||- +-.||..|
T Consensus 431 ~~~~k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k-~~~tdd~~~v~~~~~~-ak~yE~aG 488 (526)
T 2wb7_A 431 QLLAKAKGMNNENAIEYAQGAIDEYKAAINDLQK-AAQQDDYQMFLNYLNA-AKKHEMAG 488 (526)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHhhhccCCHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHH-hhhhhhcc
Confidence 3333466667777778999999999999999964 55444 4333333333 23366544
No 186
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=23.86 E-value=77 Score=25.91 Aligned_cols=73 Identities=14% Similarity=0.112 Sum_probs=46.7
Q ss_pred CCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccCCCC----CcchhhhhhhhHHHHHHHhCC
Q 044502 116 STSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDLPST----HPIRLGLALNFSVFYYEIMNS 191 (262)
Q Consensus 116 ~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt----~pirLgLaLN~SVF~yEi~~~ 191 (262)
+.++++-.-|+++--.. -.+..+ ...++-.+.|+.|.. .+||+ ..-+.-|=++|+.| .++ +|
T Consensus 10 p~~yd~W~~yl~llE~~------g~p~~d--~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~D 75 (161)
T 4h7y_A 10 ANNPEDWLSLLLKLEKN------SVPLSD--ALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-QE 75 (161)
T ss_dssp CCSHHHHHHHHHHHHHH------TCSCCH--HHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-HC
T ss_pred CCCHHHHHHHHHHHHHc------CCCchh--hHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-cC
Confidence 34667766666652221 001112 566788899998864 46664 33455688999998 455 89
Q ss_pred hHHHHHHHHHH
Q 044502 192 PERACHLAKQA 202 (262)
Q Consensus 192 ~~~A~~iak~a 202 (262)
+++|.++=+.|
T Consensus 76 ~d~aR~vy~~a 86 (161)
T 4h7y_A 76 PDDARDYFQMA 86 (161)
T ss_dssp GGGCHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99888877766
No 187
>3ljb_A Interferon-induced GTP-binding protein MX1; four-helix-bundle, antiviral protein; 2.40A {Homo sapiens}
Probab=22.91 E-value=3.8e+02 Score=23.32 Aligned_cols=107 Identities=8% Similarity=0.094 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccCCCCCc
Q 044502 93 VEEELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDLPSTHP 172 (262)
Q Consensus 93 ie~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~p 172 (262)
+.+-|..+++++.+++..-=+.+ .++.++|. ++...|.++...+.....+-. ....++-.+..+.+-.
T Consensus 10 LidkI~~F~~di~~l~~Gee~~~--~~~~rlf~-~lr~eF~~w~~~l~~~~~~~~-----~~i~~ev~~~e~~~rG---- 77 (271)
T 3ljb_A 10 LIDKVNAFNQDITALMQGEETVG--EEDIRLFT-RLRHEFHKWSTIIENNFQEGH-----KILSRKIQKFENQYRG---- 77 (271)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCC--TTCCCHHH-HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHHHHHhCceeccc--CCcchHHH-HHHHHHHHHHHHHhhhccchH-----HHHHHHHHHHHHHccC----
Confidence 44667889999999998765443 35678887 999999999888766432211 1112333333333222
Q ss_pred chhhhhhhhHHHHHHHhCChH----HHHHHHHHHHHHHHHhhc
Q 044502 173 IRLGLALNFSVFYYEIMNSPE----RACHLAKQAFDEAIAELD 211 (262)
Q Consensus 173 irLgLaLN~SVF~yEi~~~~~----~A~~iak~afd~Ai~~ld 211 (262)
-.|..-.||.+|.+=|..... =|++..+..++.....+.
T Consensus 78 rELPgFv~y~aFE~lVk~qI~~LeePAl~cl~~V~e~l~~~~~ 120 (271)
T 3ljb_A 78 RELPGFVNYRTFETIVKQQIKALEEPAVDMLHTVTDMVRLAFT 120 (271)
T ss_dssp -----CTTHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234457899999985554333 355555555444444433
No 188
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=21.36 E-value=62 Score=23.65 Aligned_cols=51 Identities=16% Similarity=0.288 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcccc
Q 044502 84 KLIKGYRHKVEEELSKI--CGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFKVD 142 (262)
Q Consensus 84 ~~i~~yr~kie~EL~~~--C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~ 142 (262)
+.+.+|...+++-|..+ +.++++++..++ +.-.+|++ |||+-+=++=|.-+
T Consensus 9 Eki~kYi~~l~eaL~~i~~a~~~l~mA~~Y~-------~Da~~fl~-kGD~v~Ala~isYa 61 (86)
T 2oo2_A 9 RETLKWLERIEERVKEIEGDEGFMRNIEAYI-------SDSRYFLE-KGDLVRAFECVVWA 61 (86)
T ss_dssp HHHHHHHHHHHHHGGGEEECHHHHHHHHHHH-------HHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-------HHHHHHHH-cCCHHHHHHHHHHH
Confidence 45667777777776655 689999999887 23344445 69997666554433
No 189
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=21.35 E-value=2e+02 Score=19.61 Aligned_cols=28 Identities=14% Similarity=0.057 Sum_probs=15.8
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHcCC
Q 044502 12 VYMAKLAEQAERYEEMVESMKKVAKLGC 39 (262)
Q Consensus 12 ~~~Aklaeq~eRy~dm~~~mk~~i~~~~ 39 (262)
..+|...-+.|+|++.+..+++++...|
T Consensus 6 ~~~a~~~~~~~~~~~A~~~~~~~~~~~p 33 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQLFLSFLELYP 33 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHCC
Confidence 3445555555666666666666655443
No 190
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=21.29 E-value=3.8e+02 Score=22.79 Aligned_cols=54 Identities=17% Similarity=0.070 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHH
Q 044502 150 EQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 206 (262)
Q Consensus 150 ~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~A 206 (262)
..|...|+++...... ...+|..+.+.++-+-.|+. +|+.++|..+.++|..-+
T Consensus 152 ~~A~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 152 KDSLALINDLLREFKK--LDDKPSLVDVHLLESKVYHK-LRNLAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHHHHTT--SSCSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh--cccchhHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHh
Confidence 5688889998887753 33467777777777777665 699999999888776543
No 191
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=21.04 E-value=3.2e+02 Score=21.73 Aligned_cols=26 Identities=8% Similarity=0.128 Sum_probs=13.2
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHH
Q 044502 11 HVYMAKLAEQAERYEEMVESMKKVAK 36 (262)
Q Consensus 11 l~~~Aklaeq~eRy~dm~~~mk~~i~ 36 (262)
+..++.+..+.++|++.+.++++.++
T Consensus 9 ~~~lg~~~~~~~~~~~A~~~~~~a~~ 34 (273)
T 1ouv_A 9 LVGLGAKSYKEKDFTQAKKYFEKACD 34 (273)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 34444555555555555555555544
No 192
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=21.02 E-value=1.1e+02 Score=27.52 Aligned_cols=63 Identities=10% Similarity=0.052 Sum_probs=41.4
Q ss_pred cchhhhhhhcccchHHHHHHHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHH
Q 044502 130 GDYYRYLAEFKVDQERKEAAEQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 130 gDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 204 (262)
|-+|-.+-++.-|+. ++|.+.|++|++++-.. .+..-.-|+-|+..-.++++.|....++|+.
T Consensus 206 G~lY~~vPp~~gGd~-----ekA~~~ferAL~LnP~~-------~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~ 268 (301)
T 3u64_A 206 TKFYAAAPESFGGGM-----EKAHTAFEHLTRYCSAH-------DPDHHITYADALCIPLNNRAGFDEALDRALA 268 (301)
T ss_dssp HHHHHHSCTTTTCCH-----HHHHHHHHHHHHHCCTT-------CSHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCccCCCH-----HHHHHHHHHHHHhCCCC-------CchHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence 444433334444554 57999999999885211 2444566777777667889988887777655
No 193
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=20.73 E-value=4.6e+02 Score=25.16 Aligned_cols=196 Identities=15% Similarity=0.194 Sum_probs=101.5
Q ss_pred CCHHHHHHHHHHHHHcCCCCCHH---HHHHHHHH---HhhhhhhhHHHHHHHHhhhhhhhhccChhhHHHHHHHHHHHHH
Q 044502 22 ERYEEMVESMKKVAKLGCEMTVE---ERNLLSVG---YKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKGYRHKVEE 95 (262)
Q Consensus 22 eRy~dm~~~mk~~i~~~~~Lt~e---ERnLLsva---yKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yr~kie~ 95 (262)
++|..-++-+++++........+ |-.+|-.| |..++..-+..+..|..-.+++...-+..-...+..||.++..
T Consensus 121 ~k~g~~l~~v~~~~~~~~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE~~~Rt~dE~~mi~~yr~k~~a 200 (526)
T 3iyk_A 121 EKFGKELEEVYNFMNGEANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDKIDA 200 (526)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHH
Confidence 56777777777777654445444 44566655 5567777788888887666776544344445777888777632
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCcchhhHHhhhccchhhhhhhcc--cchHHHHHH---HHHHHHHHHHHHH--------
Q 044502 96 ELSKICGDILTIIDKHLIPSSTSGEATVFYYKMKGDYYRYLAEFK--VDQERKEAA---EQSLKGYEAASAT-------- 162 (262)
Q Consensus 96 EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~--~~~~~~~~~---~~A~~aY~~A~~~-------- 162 (262)
== +.|++=..-|+- |..==-.-|-||.---.||=. .|..-...+ .-+.+.|+-.--+
T Consensus 201 L~-----~aIe~Er~~~~E-----EAIqe~~dmsaeI~E~AaeEVP~vGag~At~iATaRaieg~yKLkkvI~aLtGidl 270 (526)
T 3iyk_A 201 LK-----NAIEVERDGMQE-----EAIQEIAGMTADVLEAASEEVPLIGAGMATAVATGRAIEGAYKLKKVINALSGIDL 270 (526)
T ss_pred HH-----HHHHHHHhHHHH-----HHHHHHhcchHHHHHHHhhhCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 11 111111111110 111011234555544444422 133222222 2335556544322
Q ss_pred HhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHH--HHHHHHHHhhccCCccchHhHHHHHHHHHh
Q 044502 163 ANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAK--QAFDEAIAELDTLSEESYKDSTLIMQLLRD 230 (262)
Q Consensus 163 a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak--~afd~Ai~~ld~l~ee~y~ds~~IlqLLrD 230 (262)
.....|+.||--|..+|-. =+ .-.+|..-|.-+.. ..+++--.+++.+.++..+-....++--+.
T Consensus 271 sHl~~P~I~p~~iet~L~~-~~--~~i~D~~L~~~v~sK~~~v~E~~~Ev~Hi~~~i~P~~kk~~~~~~~ 337 (526)
T 3iyk_A 271 THLRTPKIEPSVVSTILEY-RA--KEIPDNALAVSVLSKNRAIQENHKELMHIKNEILPRFKKAMDEEKE 337 (526)
T ss_pred hhccCCCCCHHHHHHHHhC-CC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2236889999988888742 01 12244443333332 446666677777777766655555544443
No 194
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=20.56 E-value=74 Score=26.68 Aligned_cols=39 Identities=23% Similarity=0.452 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHH
Q 044502 149 AEQSLKGYEAASATANKDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 207 (262)
Q Consensus 149 ~~~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~Ai 207 (262)
-+.|.++|++|..-- ..|. +++...+|+.|||.+||.=.
T Consensus 19 YE~A~~~Ye~a~~ng------~~pQ--------------~~Kql~KA~NIAKse~drd~ 57 (199)
T 3ub0_A 19 YEKARADLEEAKKND------VSPQ--------------LLKQLTKACNIAKSEFEREA 57 (199)
T ss_dssp HHHHHHHHHHHHHTT------CCHH--------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC------CCHH--------------HHHHHHHHHHHHHHHHhHHH
Confidence 367888888884321 2221 35778899999999998633
No 195
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=20.27 E-value=2.1e+02 Score=25.92 Aligned_cols=21 Identities=10% Similarity=0.093 Sum_probs=12.3
Q ss_pred HHHHHhCChHHHHHHHHHHHH
Q 044502 184 FYYEIMNSPERACHLAKQAFD 204 (262)
Q Consensus 184 F~yEi~~~~~~A~~iak~afd 204 (262)
..|...|++++|+.+-.+|+.
T Consensus 399 ~~~~~~~~~~~A~~~~e~al~ 419 (530)
T 2ooe_A 399 MEYYCSKDKSVAFKIFELGLK 419 (530)
T ss_dssp HHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHcCChhHHHHHHHHHHH
Confidence 334456777777666555543
No 196
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=20.24 E-value=1.1e+02 Score=25.45 Aligned_cols=30 Identities=7% Similarity=-0.053 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHHcCC
Q 044502 10 THVYMAKLAEQAERYEEMVESMKKVAKLGC 39 (262)
Q Consensus 10 ~l~~~Aklaeq~eRy~dm~~~mk~~i~~~~ 39 (262)
.+..++.+..+.|+|++++.++.+++..+|
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 35 (281)
T 2c2l_A 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNP 35 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 455667777777888888877777776544
Done!