Query 044504
Match_columns 525
No_of_seqs 520 out of 3441
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 06:14:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044504.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044504hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i7t_A Cleavage and polyadenyl 100.0 2.5E-82 8.5E-87 670.5 50.1 451 18-468 6-459 (459)
2 3iek_A Ribonuclease TTHA0252; 100.0 4.9E-82 1.7E-86 660.9 50.9 425 24-465 1-431 (431)
3 3af5_A Putative uncharacterize 100.0 1.7E-70 5.9E-75 600.4 50.7 440 19-465 184-650 (651)
4 2xr1_A Cleavage and polyadenyl 100.0 1.5E-70 5.1E-75 599.2 48.9 439 20-465 180-639 (640)
5 2ycb_A Beta-CAsp RNAse, cleava 100.0 4.2E-70 1.4E-74 596.3 49.1 440 20-465 176-635 (636)
6 2i7x_A Protein CFT2; polyadeny 100.0 5.7E-56 2E-60 487.0 39.5 352 24-381 1-382 (717)
7 3zq4_A Ribonuclease J 1, RNAse 100.0 2.3E-54 7.9E-59 463.3 29.7 432 21-511 6-463 (555)
8 3bk2_A RNAse J, metal dependen 100.0 1E-51 3.4E-56 445.0 32.5 431 19-511 12-478 (562)
9 2az4_A Hypothetical protein EF 100.0 2.6E-44 9E-49 376.9 26.1 382 21-465 4-429 (429)
10 3zdk_A 5' exonuclease apollo; 100.0 1.9E-33 6.4E-38 282.4 24.0 271 74-435 23-305 (336)
11 4b87_A DNA cross-LINK repair 1 100.0 2.1E-33 7.3E-38 285.7 24.5 320 39-443 29-358 (367)
12 1zkp_A Hypothetical protein BA 99.9 3.5E-22 1.2E-26 195.5 16.9 175 16-222 17-205 (268)
13 2cbn_A Ribonuclease Z; phospho 99.9 3.7E-22 1.3E-26 199.1 14.7 175 23-222 1-239 (306)
14 1y44_A Ribonuclease Z; zinc-de 99.9 7.2E-22 2.5E-26 198.3 15.6 175 24-223 1-238 (320)
15 3g1p_A Protein PHNP; C-P lyase 99.9 7.8E-22 2.7E-26 191.9 11.0 169 23-223 2-194 (258)
16 3md7_A Beta-lactamase-like; ss 99.8 3E-20 1E-24 184.1 13.4 210 14-254 19-264 (293)
17 3zwf_A Zinc phosphodiesterase 99.8 3.4E-20 1.2E-24 189.2 13.5 191 24-223 1-280 (368)
18 2e7y_A TRNAse Z; tRNA maturati 99.8 1.3E-18 4.3E-23 171.0 16.4 194 24-255 1-247 (280)
19 3jxp_A Coenzyme PQQ synthesis 99.8 1.2E-19 4E-24 181.6 8.6 179 23-221 2-227 (321)
20 3kl7_A Putative metal-dependen 99.8 6.2E-17 2.1E-21 154.9 21.5 147 20-218 26-183 (235)
21 3m8t_A 'BLR6230 protein; subcl 99.7 1.2E-16 4.1E-21 158.0 15.5 155 26-195 47-206 (294)
22 3rpc_A Possible metal-dependen 99.7 2.4E-16 8.2E-21 153.6 15.5 162 21-219 2-193 (264)
23 2wyl_A L-ascorbate-6-phosphate 99.7 4.2E-15 1.5E-19 151.3 21.6 169 19-218 33-250 (360)
24 2r2d_A AGR_PTI_140P, Zn-depend 99.7 3.4E-16 1.2E-20 153.3 12.4 150 36-197 42-219 (276)
25 3esh_A Protein similar to meta 99.7 6.8E-17 2.3E-21 158.8 7.1 151 35-197 46-212 (280)
26 3bv6_A Metal-dependent hydrola 99.7 6.2E-15 2.1E-19 151.0 21.7 169 19-218 57-275 (379)
27 3dha_A N-acyl homoserine lacto 99.7 2.5E-16 8.5E-21 152.4 10.3 154 22-197 6-201 (254)
28 1k07_A FEZ-1 beta-lactamase; m 99.6 4.9E-16 1.7E-20 151.2 11.9 152 26-194 17-177 (263)
29 1ztc_A Hypothetical protein TM 99.6 2.1E-16 7.1E-21 149.8 6.9 157 22-195 11-178 (221)
30 3adr_A Putative uncharacterize 99.6 1.1E-14 3.9E-19 141.2 17.0 149 25-194 5-168 (261)
31 4ax1_B Metallo-beta-lactamase 99.6 3.8E-15 1.3E-19 147.7 13.8 156 26-194 50-209 (303)
32 3l6n_A Metallo-beta-lactamase; 99.6 3.2E-16 1.1E-20 148.1 5.5 132 34-194 28-161 (219)
33 2xf4_A Hydroxyacylglutathione 99.6 6.6E-16 2.3E-20 144.9 7.5 151 25-195 2-155 (210)
34 1p9e_A Methyl parathion hydrol 99.6 1.6E-15 5.6E-20 152.6 9.6 154 37-196 97-260 (331)
35 2bib_A CBPE, teichoic acid pho 99.6 5.5E-15 1.9E-19 159.0 13.4 181 21-215 3-226 (547)
36 4efz_A Metallo-beta-lactamase 99.6 5.9E-15 2E-19 146.3 12.1 160 22-196 3-179 (298)
37 3q6v_A Beta-lactamase; metallo 99.6 3.8E-15 1.3E-19 141.9 10.1 158 26-195 15-172 (233)
38 2zwr_A Metallo-beta-lactamase 99.6 2E-15 6.9E-20 141.4 7.4 148 24-195 1-148 (207)
39 2zo4_A Metallo-beta-lactamase 99.6 2.4E-14 8.3E-19 143.0 15.5 155 36-195 21-194 (317)
40 3aj3_A MLR6805 protein, 4-pyri 99.6 1.3E-15 4.5E-20 149.0 6.0 162 23-196 3-212 (274)
41 1m2x_A Class B carbapenemase B 99.6 2.2E-15 7.5E-20 142.8 5.8 131 35-194 25-157 (223)
42 1sml_A Protein (penicillinase) 99.6 1.2E-14 4E-19 141.9 11.0 146 36-194 37-187 (269)
43 2qed_A Hydroxyacylglutathione 99.5 4.3E-15 1.5E-19 144.0 7.6 132 20-194 4-137 (258)
44 2p18_A Glyoxalase II; metallop 99.5 1.1E-14 3.8E-19 145.0 10.4 142 21-195 26-184 (311)
45 1e5d_A Rubredoxin\:oxygen oxid 99.5 7.2E-15 2.5E-19 151.9 8.4 132 35-193 33-167 (402)
46 1mqo_A Beta-lactamase II; alph 99.5 3.1E-15 1E-19 142.2 4.7 131 35-194 39-171 (227)
47 3iog_A Beta-lactamase; hydrola 99.5 5.6E-15 1.9E-19 140.1 6.2 154 27-194 13-168 (227)
48 1a7t_A Metallo-beta-lactamase; 99.5 3.2E-15 1.1E-19 142.6 4.4 131 36-195 36-168 (232)
49 4hl2_A Beta-lactamase NDM-1; s 99.5 4E-16 1.4E-20 150.0 -2.2 141 34-195 45-185 (243)
50 1qh5_A Glyoxalase II, protein 99.5 1E-14 3.4E-19 141.6 7.1 131 24-194 1-137 (260)
51 1vjn_A Zn-dependent hydrolase 99.5 1.9E-13 6.6E-18 129.1 15.4 129 23-218 12-147 (220)
52 2fhx_A SPM-1; metallo-beta-lac 99.5 2.1E-14 7.2E-19 138.0 8.2 156 27-194 20-187 (246)
53 4dik_A Flavoprotein; TM0755, e 99.5 2.9E-14 9.9E-19 146.8 9.6 128 37-193 52-182 (410)
54 3hnn_A Putative diflavin flavo 99.5 3.9E-15 1.3E-19 144.8 2.8 130 36-192 42-175 (262)
55 1xm8_A Glyoxalase II; structur 99.5 1E-14 3.5E-19 141.0 5.5 132 24-195 1-135 (254)
56 2vw8_A PA1000, PQSE; quinolone 99.5 5.3E-14 1.8E-18 139.7 9.4 159 26-194 16-183 (303)
57 2y8b_A Metallo-B-lactamase; hy 99.5 3.7E-14 1.3E-18 138.1 7.7 136 35-195 66-201 (265)
58 3tp9_A Beta-lactamase and rhod 99.5 7.7E-15 2.6E-19 155.1 2.9 144 22-195 2-153 (474)
59 4ad9_A Lactb2, beta-lactamase- 99.5 2.5E-14 8.4E-19 141.1 5.4 135 35-194 30-168 (289)
60 2ohh_A Type A flavoprotein FPR 99.5 7E-14 2.4E-18 144.6 8.5 133 36-193 34-172 (404)
61 2gcu_A Putative hydroxyacylglu 99.4 4.8E-14 1.7E-18 135.6 6.0 136 23-195 2-146 (245)
62 1ycg_A Nitric oxide reductase; 99.4 8.9E-14 3.1E-18 143.5 5.9 131 36-193 35-168 (398)
63 1jjt_A IMP-1 metallo beta-lact 99.4 4.6E-14 1.6E-18 134.2 3.2 130 34-194 30-161 (228)
64 4eyb_A Beta-lactamase NDM-1; m 99.4 1.5E-14 5.2E-19 141.3 -1.4 142 33-195 71-212 (270)
65 3r2u_A Metallo-beta-lactamase 99.4 4.1E-14 1.4E-18 148.9 1.3 146 20-196 21-174 (466)
66 2q9u_A A-type flavoprotein; fl 99.4 1.4E-13 4.9E-18 142.7 4.7 131 36-193 40-173 (414)
67 2cfu_A SDSA1; SDS-hydrolase, l 99.2 2.5E-11 8.4E-16 132.5 11.3 156 36-195 122-303 (658)
68 2p97_A Hypothetical protein; p 99.2 2.5E-12 8.6E-17 119.7 2.7 123 32-195 19-141 (201)
69 2yhe_A SEC-alkyl sulfatase; hy 98.6 1.4E-11 4.8E-16 133.8 0.0 155 37-194 133-313 (668)
70 2p4z_A Metal-dependent hydrola 98.8 3.8E-09 1.3E-13 103.6 6.9 87 22-112 11-104 (284)
71 3h3e_A Uncharacterized protein 98.2 3.9E-07 1.3E-11 87.7 1.7 76 22-111 11-92 (267)
72 3rpc_A Possible metal-dependen 89.1 0.55 1.9E-05 44.4 6.2 58 406-465 202-264 (264)
73 2wyl_A L-ascorbate-6-phosphate 86.8 1.1 3.8E-05 44.5 7.0 65 406-470 257-328 (360)
74 3bv6_A Metal-dependent hydrola 86.8 0.75 2.6E-05 46.1 5.8 63 406-469 282-352 (379)
75 1zkp_A Hypothetical protein BA 83.5 1.4 4.8E-05 41.5 5.7 56 406-464 211-267 (268)
76 2e7y_A TRNAse Z; tRNA maturati 81.4 2.9 0.0001 39.3 7.1 59 405-465 219-280 (280)
77 1y44_A Ribonuclease Z; zinc-de 75.7 4.5 0.00015 39.0 6.6 59 405-467 244-306 (320)
78 2cbn_A Ribonuclease Z; phospho 69.7 5.6 0.00019 37.9 5.6 56 406-465 247-306 (306)
79 3zwf_A Zinc phosphodiesterase 63.2 7.4 0.00025 38.6 5.1 62 406-469 287-361 (368)
80 3md7_A Beta-lactamase-like; ss 59.7 11 0.00037 35.9 5.4 56 405-466 237-292 (293)
81 2p4z_A Metal-dependent hydrola 51.8 14 0.00049 34.9 4.8 50 410-465 235-284 (284)
82 3h3e_A Uncharacterized protein 47.2 33 0.0011 32.2 6.4 93 360-466 171-266 (267)
83 3g1p_A Protein PHNP; C-P lyase 39.7 23 0.00077 32.8 4.0 55 406-466 198-252 (258)
84 3kl7_A Putative metal-dependen 38.6 16 0.00055 33.4 2.7 41 404-444 183-223 (235)
85 1ej0_A FTSJ; methyltransferase 38.0 31 0.0011 28.9 4.4 63 208-270 87-154 (180)
86 3evf_A RNA-directed RNA polyme 35.3 85 0.0029 29.5 7.1 64 207-271 138-205 (277)
87 3gcz_A Polyprotein; flavivirus 31.7 77 0.0026 29.9 6.2 65 206-271 153-222 (282)
88 1vjn_A Zn-dependent hydrolase 31.4 45 0.0016 30.0 4.5 29 406-434 149-177 (220)
89 3jxp_A Coenzyme PQQ synthesis 27.6 22 0.00077 34.3 1.8 59 406-467 244-307 (321)
90 2nyu_A Putative ribosomal RNA 25.9 53 0.0018 28.3 3.8 62 209-270 97-163 (196)
91 3dou_A Ribosomal RNA large sub 25.8 37 0.0013 29.8 2.7 61 209-269 91-156 (191)
92 1dus_A MJ0882; hypothetical pr 25.7 1.7E+02 0.0057 24.6 7.2 57 209-270 119-175 (194)
93 2px2_A Genome polyprotein [con 23.6 1.7E+02 0.0059 27.2 6.8 78 207-287 137-226 (269)
94 3njr_A Precorrin-6Y methylase; 23.4 1.3E+02 0.0046 26.2 6.1 49 209-268 122-170 (204)
95 3eld_A Methyltransferase; flav 23.2 1.5E+02 0.0051 28.1 6.5 64 207-270 145-211 (300)
96 2gak_A Beta-1,6-N-acetylglucos 23.1 63 0.0022 32.1 4.1 56 403-459 88-144 (391)
97 2plw_A Ribosomal RNA methyltra 20.6 34 0.0012 29.8 1.4 60 208-268 105-170 (201)
98 2oxt_A Nucleoside-2'-O-methylt 20.5 1.7E+02 0.0059 27.0 6.4 55 207-263 138-195 (265)
99 4h4n_A Hypothetical protein BA 20.4 74 0.0025 21.8 2.6 24 19-42 14-37 (67)
100 3e05_A Precorrin-6Y C5,15-meth 20.2 1.7E+02 0.0058 25.2 6.1 51 208-267 107-157 (204)
No 1
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=100.00 E-value=2.5e-82 Score=670.47 Aligned_cols=451 Identities=64% Similarity=1.135 Sum_probs=368.4
Q ss_pred CCCCCcEEEEEecCCCccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHh
Q 044504 18 SREGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLE 97 (525)
Q Consensus 18 ~~~~~~m~i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~ 97 (525)
..++++|+|++||+++++|+||++|+.++..||||||+.++..+...++.+..+++.+||+|||||+|.||+||+|++..
T Consensus 6 ~~~~~~m~i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~~~~~~~~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~ 85 (459)
T 2i7t_A 6 AEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQ 85 (459)
T ss_dssp ---CEEEEEEEEESSSSSSSCEEEEEETTEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHH
T ss_pred cCCCCeEEEEEEecCCCCCCCEEEEEECCeEEEEeCCCCcCcccccccCcccccCcccCcEEEECCCChhhhhhhHHHHH
Confidence 34567899999999999999999999999999999999765444455665556778899999999999999999999988
Q ss_pred hcCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeCCCCcCceEE
Q 044504 98 KTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMF 177 (525)
Q Consensus 98 ~~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~gH~~gs~~~ 177 (525)
+.+++++||++++|.+++..++.++.+++.......+|+..++.....++..+++++++.++|++++++++||++|+++|
T Consensus 86 ~~~~~~~iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~GH~~Gs~~~ 165 (459)
T 2i7t_A 86 KTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMF 165 (459)
T ss_dssp HSSCCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEEECCSSTTCEEE
T ss_pred hcCCCCCEEechHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEECCEEEEEEeCCCccCcEEE
Confidence 88888999999999999998888877766555556778888887777788999999999999999999999999999999
Q ss_pred EEEECCEEEEEeecCCCCCcccCccCCCCCCCCcEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHhcCCeEEEcccchhh
Q 044504 178 MVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIREKRFTDVIHSTISQGGRVLIPAFALGR 257 (525)
Q Consensus 178 ~i~~~~~~ilytGD~~~~~~~~~~~~~~~~~~~D~LI~Esty~~~~~~~~~~~~~~l~~~i~~~~~~~g~vlip~fa~gr 257 (525)
.++.++.+++||||+...++..+....++..++|+||+||||+++.|+++.+++++|.+.+.++++++|+|+||+|++||
T Consensus 166 ~i~~~~~~il~sGD~~~~~~~~~~~~~~~~~~~D~Li~Esty~~~~~~~~~~~~~~l~~~i~~~~~~~g~vlip~fa~gr 245 (459)
T 2i7t_A 166 MIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGR 245 (459)
T ss_dssp EEEETTEEEEECCSCCCC-----CCCCCCSSCCSEEEEECTTTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCSSSS
T ss_pred EEEECCcEEEEeCCCCCCCCcccCCCCcCCCCCeEEEECCCCCCCCCCChHHHHHHHHHHHHHHHHCCCEEEEEecchhH
Confidence 99999999999999999887766555555568999999999999999988899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCEEEEChhHHHHHHHHHHhHHhhHHHHHHHhcCCCCCCCCCCcccCCccccCCCCCeEE
Q 044504 258 AQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIRNQFANSNPFKFKHISPLNSIDDFSDVGPSVV 337 (525)
Q Consensus 258 ~qell~~l~~~~~~~~~~~~~pI~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~p~vi 337 (525)
+|||+++|+++|++++.++++|||++|+|+.+++++|+.+.+|+++.+++.+...|||.|+++..+.+.+++...+||||
T Consensus 246 ~qell~~l~~~~~~~~~~~~~pi~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vi 325 (459)
T 2i7t_A 246 AQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVV 325 (459)
T ss_dssp HHHHHHHHHHHHHHCGGGTTSCEEEC---------------------------------CCSEEECCCTTSSCCCSSEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCccEEEECHHHHHHHHHHHHHHHHHhHHHHHHhcccCCcCCCcceeeCCHHHhcCCCCeEE
Confidence 99999999999998777778999999999999999999999999998888777789999999888777766666799999
Q ss_pred EeCCCCCCCChHHHHHHHHcCCCCCcEEecccCCCCChhHHhhcCCceeEeecCeeeeeeEEEEEeecccCCCHHHHHHH
Q 044504 338 MASPGGLQSGLSRQLFDIWCSDKKNACVIPGYVVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTF 417 (525)
Q Consensus 338 ia~~gml~~g~~~~~~~~~~~~~~n~ii~~gy~~~gt~~~~l~~~~~~~~~~~g~~i~~~~~v~~i~~S~Had~~~l~~~ 417 (525)
||++|||++|++++++++|++|++|+|+|+|||++||+|++++++++.+....|+.++++|+|+.++||+|||++||.+|
T Consensus 326 ia~~gm~~~g~~~~~l~~~~~~~~~~ii~~gy~~~gt~g~~l~~~~~~~~~~~g~~~~~~~~v~~~~~S~Had~~~l~~~ 405 (459)
T 2i7t_A 326 MASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEF 405 (459)
T ss_dssp EESCTTCSSHHHHHHHHHHTTCTTCEEEECSCCCTTSHHHHHTTCCSEEECTTSCEEECCSEEEECCCSCCCCHHHHHHH
T ss_pred EEcCcccCCCHHHHHHHHHcCCCCCeEEEEecCCCCChHHHHhhCCceeeeeCCcEEEEEEEEEEeeecccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999998877778999999999999999999999999999
Q ss_pred HHhcCCCeEEEecCCHhHHHHHHHHHHHHhccC---CceEeeCCCCCEEEEeeC
Q 044504 418 LKELMPPNIILVHGESHEMGRLKTKLMTELADC---NTKIITPKNCQSVEMYFN 468 (525)
Q Consensus 418 i~~~~P~~vi~vHGe~~~~~~l~~~l~~~~~~~---~~~i~~p~~g~~~~~~~~ 468 (525)
++.++|++||+||||...+.+|++.|+++++.. +.++++|+|||+++|.|+
T Consensus 406 i~~~~p~~v~~vHGe~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 459 (459)
T 2i7t_A 406 IRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFR 459 (459)
T ss_dssp HHHHCCSEEEEESSCHHHHHHHHHHHHHHHSSCTTCCCEEECCCTTCCEEEEEC
T ss_pred HHhcCCCeEEEeCCCHHHHHHHHHHHHHHhccccccCceEEeCCCCCEEEEEeC
Confidence 999999999999999999999999999888643 368999999999999874
No 2
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=100.00 E-value=4.9e-82 Score=660.92 Aligned_cols=425 Identities=29% Similarity=0.501 Sum_probs=382.4
Q ss_pred EEEEEecCCCccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCc
Q 044504 24 LIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKG 103 (525)
Q Consensus 24 m~i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~ 103 (525)
|+|++||+++++|+||++|+.++..||||||+.++......... .++++.+||+|||||+|.||+||+|+|.+ .++++
T Consensus 1 M~i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~~~~~~~~~~~-~~~~~~~Id~VllTH~H~DH~gglp~l~~-~~~~~ 78 (431)
T 3iek_A 1 MRIVPFGAAREVTGSAHLLLAGGRRVLLDCGMFQGKEEARNHAP-FGFDPKEVDAVLLTHAHLDHVGRLPKLFR-EGYRG 78 (431)
T ss_dssp CEEEECSCSSSSSCCCEEEEETTEEEEECCCCCCGGGGGGGGSC-CSSCGGGCCEEECSCCCHHHHTTHHHHHH-TTCCS
T ss_pred CEEEEeCCCCCCCCcEEEEEECCeEEEEeCCCCcchhhccchhh-cCCCcccCCEEEECCCChHHhccHHHHHH-cCCCC
Confidence 79999999999999999999999999999998554311111221 13567899999999999999999999876 45789
Q ss_pred eEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeCCCCcCceEEEEEECC
Q 044504 104 RVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAG 183 (525)
Q Consensus 104 ~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~gH~~gs~~~~i~~~~ 183 (525)
+||+|++|.++++.++.++.+++.. ++|+..++...+..+..+++++.+++++++++++++||++||++|.++.++
T Consensus 79 ~Iy~t~~t~~l~~~~l~d~~~~~~~----~~y~~~~~~~~~~~~~~l~~~~~~~l~g~~v~~~~agH~~Gs~~~~i~~~~ 154 (431)
T 3iek_A 79 PVYATRATVLLMEIVLEDALKVMDE----PFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGHLPGSAFVVAQGEG 154 (431)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHCSS----CSSCHHHHHHHHHTEEECCTTCCEEETTEEEEEEECCSSTTCEEEEEEETT
T ss_pred eEEEcHHHHHHHHHHHHHHHhhccc----CCCCHHHHHHHHhccEEcCCCCeEEeCCEEEEEEeCCCCcCceEEEEEECC
Confidence 9999999999999999988776532 689999999988899999999999999999999999999999999999999
Q ss_pred EEEEEeecCCCCCcccCccCCCCCCCCcEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHhcCCeEEEcccchhhHHHHHH
Q 044504 184 VRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIREKRFTDVIHSTISQGGRVLIPAFALGRAQELLL 263 (525)
Q Consensus 184 ~~ilytGD~~~~~~~~~~~~~~~~~~~D~LI~Esty~~~~~~~~~~~~~~l~~~i~~~~~~~g~vlip~fa~gr~qell~ 263 (525)
.+++||||++..++.++..... ..++|+||+||||+++.|+++.+++++|.+.+.+++++||+|+||+|++||+||+++
T Consensus 155 ~~ilfsGD~~~~~~~~l~~~~~-~~~~D~LI~EsTy~~~~h~~~~~~~~~l~~~i~~~~~~gg~vlIp~fa~gR~qell~ 233 (431)
T 3iek_A 155 RTLVYSGDLGNREKDVLPDPSL-PPLADLVLAEGTYGDRPHRPYRETVREFLEILEKTLSQGGKVLIPTFAVERAQEILY 233 (431)
T ss_dssp EEEEECCCCCCTTSSSSCCCCB-CCCCSEEEEECTTTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCTTTHHHHHHH
T ss_pred EEEEEeCCCCCCCCcccCCccc-cCCccEEEEEcccCCcCCCChHHHHHHHHHHHHHHHHcCCeEEEEeccchHHHHHHH
Confidence 9999999999888776643332 458999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCEEEEChhHHHHHHHHHHhHHhhHHHHHHHh-cCCCCCCCCCCcccCCcccc----CCCCCeEEE
Q 044504 264 ILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIRNQF-ANSNPFKFKHISPLNSIDDF----SDVGPSVVM 338 (525)
Q Consensus 264 ~l~~~~~~~~~~~~~pI~~~s~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~pf~~~~~~~~~~~~~~----~~~~p~vii 338 (525)
+|+++|++ ++++|||++|||+.+++++|+.+.+||++++++.+ ...|||.|++++.+++.++. +.++|||||
T Consensus 234 ~l~~~~~~---~~~~pi~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~p~vii 310 (431)
T 3iek_A 234 VLYTHGHR---LPRAPIYLDSPMAGRVLSLYPRLVRYFSEEVQAHFLQGKNPFRPAGLEVVEHTEASKALNRAPGPMVVL 310 (431)
T ss_dssp HHHHHGGG---SCCCCEEEECHHHHHHHHHGGGGGGGSCHHHHHHHHTTSCTTCCTTEEECCSHHHHHHHHHSCSSEEEE
T ss_pred HHHHHHHh---ccCCCEEEeChHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCeEEeCCHHHHHHHhcCCCCeEEE
Confidence 99999987 56899999999999999999999999999998877 66899999999988876553 357899999
Q ss_pred eCCCCCCCChHHHHHHHHcCCCCCcEEecccCCCCChhHHhhcCCceeEeecCeeeeeeEEEEEe-ecccCCCHHHHHHH
Q 044504 339 ASPGGLQSGLSRQLFDIWCSDKKNACVIPGYVVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYI-SFSAHADYAQTSTF 417 (525)
Q Consensus 339 a~~gml~~g~~~~~~~~~~~~~~n~ii~~gy~~~gt~~~~l~~~~~~~~~~~g~~i~~~~~v~~i-~~S~Had~~~l~~~ 417 (525)
|++|||++|++++++++|++|++|+|||+|||++||+||+|++++++++ +.|+.++++|+|+++ +||||||++||++|
T Consensus 311 a~~gm~~~G~~~~~l~~~~~~~~n~ii~~gyq~~gt~g~~l~~~~~~v~-~~g~~~~v~a~v~~~~~~saHad~~~l~~~ 389 (431)
T 3iek_A 311 AGSGMLAGGRILHHLKHGLSDPRNALVFVGYQPQGGLGAEIIARPPAVR-ILGEEVPLRASVHTLGGFSGHAGQDELLDW 389 (431)
T ss_dssp ESCTTSSSSHHHHHHHHHTTCTTCEEEECSCCCTTSHHHHHHTCCSEEE-ETTEEEECCSEEEECGGGCSSCCHHHHHHH
T ss_pred ecCCCCCCChHHHHHHHhcCCCCCeEEEECCCCCCChHHHhhcCCcEEE-ECCEEEEEEEEEEEECCccccCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999988876 479999999999999 79999999999999
Q ss_pred HHhcCCCeEEEecCCHhHHHHHHHHHHHHhccCCceEeeCCCCCEEEE
Q 044504 418 LKELMPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSVEM 465 (525)
Q Consensus 418 i~~~~P~~vi~vHGe~~~~~~l~~~l~~~~~~~~~~i~~p~~g~~~~~ 465 (525)
++.++ +||+||||++++.+|++.|++++ .++++|++||++++
T Consensus 390 ~~~~~--~v~lvHge~~~~~~l~~~l~~~~----~~~~~p~~~~~~~~ 431 (431)
T 3iek_A 390 LQGEP--RVVLVHGEEEKLLALGKLLALRG----QEVSLARFGEGVPV 431 (431)
T ss_dssp HTTCS--EEEEESSCHHHHHHHHHHHHHTT----CEEEECCTTCCEEC
T ss_pred HHhCC--eEEEECCCHHHHHHHHHHHHHhC----CcEEECCCCCEEeC
Confidence 99875 89999999999999999998764 28999999999874
No 3
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=100.00 E-value=1.7e-70 Score=600.37 Aligned_cols=440 Identities=31% Similarity=0.535 Sum_probs=380.0
Q ss_pred CCCCcEEEEEecCCCccCCcEEEEEECCeEEEEecCCCCCcC--ccccCCCCCC--C--CC--CCccEEEcCCCchhHhc
Q 044504 19 REGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYS--GMAALPYFDE--I--DP--SAIDVLLITHFHLDHAA 90 (525)
Q Consensus 19 ~~~~~m~i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~--~~~~~~~~~~--~--~~--~~Id~IliTH~H~DH~g 90 (525)
..+++|+|++||+++++|+||++|+.++..||||||..++.. +...+|.+.. + ++ .+||+|||||+|.||+|
T Consensus 184 ~~~~~m~i~~LG~~~~vg~s~~LI~~~~~~ILID~G~~~~~~~~g~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DHiG 263 (651)
T 3af5_A 184 YKSRWIRITGLGGFREVGRSALLVQTDESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCG 263 (651)
T ss_dssp CCCSCEEEEEEECSSSSSCCEEEEEESSCEEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHHHT
T ss_pred CCCCceEEEEEecCCCCCCcEEEEEECCcEEEEeCCCChhccccchhhcccccchhhccCcccCCCCEEEECCCChHhhc
Confidence 345689999999999999999999999999999999874321 1234454431 2 45 78999999999999999
Q ss_pred ChHHHHhhcC-CCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEe-CCEEEEEEeC
Q 044504 91 SLPYFLEKTT-FKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEV-NGIKFWCYTA 168 (525)
Q Consensus 91 glp~l~~~~~-~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~gi~v~~~~~ 168 (525)
|+++|.+. + ++++||++.+|.+++...+.++.+++........|+..++..+...+..+++++.+++ ++++++++++
T Consensus 264 glp~L~~~-~~~~~pIy~t~~t~~ll~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~l~ggi~v~~~~~ 342 (651)
T 3af5_A 264 MLPYLFRY-NLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNA 342 (651)
T ss_dssp THHHHHHT-TCCCSCEEECHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEEC
T ss_pred CHHHHHhc-CCCCceEEEcHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCCEEEecCCEEEEEecC
Confidence 99999853 3 5789999999999998888887766544334556887777776667889999999999 9999999999
Q ss_pred CCCcCceEEEEEECCE--EEEEeecCCCCCcccCccCCCCCCCCcEEEEcCCCCCCC--CCChhHHHHHHHHHHHHHHhc
Q 044504 169 GHVLGAAMFMVDIAGV--RVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQL--HQPRNIREKRFTDVIHSTISQ 244 (525)
Q Consensus 169 gH~~gs~~~~i~~~~~--~ilytGD~~~~~~~~~~~~~~~~~~~D~LI~Esty~~~~--~~~~~~~~~~l~~~i~~~~~~ 244 (525)
||++||++|.++.+++ +++||||++...+.++..+.....++|+||+||||+++. |+++.+.++.|.+.+.+++++
T Consensus 343 gH~~Gs~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~l~~ 422 (651)
T 3af5_A 343 GHILGSAIVHLHIGNGLHNIAITGDFKFIPTRLLEPANAKFPRLETLVMESTYGGANDIQMPREEAEKRLIEVIHNTIKR 422 (651)
T ss_dssp SSSTTCEEEEEEETTTTTCEEECCSCCCSCCSSCCCCCCBCSSCSEEEEECTTCSTTCCCCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCcCcEEEEEEECCCceEEEEeCCCCCCcccccccccccCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 9999999999999888 999999999988766654423356899999999999988 888888899999999999999
Q ss_pred CCeEEEcccchhhHHHHHHHHHHHHhcCCCCCCCCEEEEChhHHHHHHHHHHhHHhhHHHHHHHh--cCCCCCCCCCCcc
Q 044504 245 GGRVLIPAFALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIRNQF--ANSNPFKFKHISP 322 (525)
Q Consensus 245 ~g~vlip~fa~gr~qell~~l~~~~~~~~~~~~~pI~~~s~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~pf~~~~~~~ 322 (525)
+|+|+||+|++||+||++++|+++|+++ .++ +|||+++ ++.+++.+|.++.+|++..+++.+ ...+||.+++++.
T Consensus 423 ~g~vlIp~favgR~qell~~l~~~~~~~-~l~-~~I~~dg-~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~ 499 (651)
T 3af5_A 423 GGKVLIPAMAVGRAQEVMMVLEEYARIG-GIE-VPIYLDG-MIWEATAIHTAYPEYLSRRLREQIFKEGYNPFLSEIFHP 499 (651)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHHHHTTT-CCC-SCEEEES-SHHHHHHHHHTCGGGSCHHHHHHTTTSSCCSTTCTTEEE
T ss_pred CCEEEEeccCccHHHHHHHHHHHhhhhc-CCC-CcEEEec-hHHHHHHHHHHhHHhcCHHHHHHHHhccCCCccCCceEE
Confidence 9999999999999999999999998764 344 8999997 999999999999999999887665 4579998888877
Q ss_pred cCCccc---c-CCCCCeEEEeCCCCCCCChHHHHHHHHcCCCCCcEEecccCCCCChhHHhhcCCceeEee--cCe--ee
Q 044504 323 LNSIDD---F-SDVGPSVVMASPGGLQSGLSRQLFDIWCSDKKNACVIPGYVVEGTLAKTIISEPKEVTLM--NGL--TA 394 (525)
Q Consensus 323 ~~~~~~---~-~~~~p~viia~~gml~~g~~~~~~~~~~~~~~n~ii~~gy~~~gt~~~~l~~~~~~~~~~--~g~--~i 394 (525)
+.+.++ + ...+|+|||+++|||++|++++++++|+.+++|+|||+|||++||+|++|.++++++... .|. .+
T Consensus 500 v~~~~~~~~~~~~~~~~vIia~~gm~~gg~~~~~l~~~~~~~~~~vi~sg~~~~gt~gr~l~~g~~~i~~~~~~G~~~~v 579 (651)
T 3af5_A 500 VANSRERQDIIDSNEPAIIIASSGMLVGGPSVEYFKQLAPDPKNSIIFVSYQAEGTLGRQVQSGIREIPMVGEEGRTEVI 579 (651)
T ss_dssp CCSHHHHHHHHHSCSCEEEEESCTTSSSSHHHHHHHHHTTCTTCEEEECSCCCTTCHHHHHHHTCSEEEEECGGGCEEEE
T ss_pred cCCHHHHHHHhcCCCCEEEEECCCCCCCCHHHHHHHHHhCCCCCEEEEeCCCCCCcHHHHHHhccceeeehhcCCCceEE
Confidence 775322 2 336899999999999999999999999999999999999999999999999988776543 477 88
Q ss_pred eeeEEEEEee-cccCCCHHHHHHHHHhcC--CCeEEEecCCHhHHHHHHHHHHHHhccCCceEeeCCCCCEEEE
Q 044504 395 PLNMQVHYIS-FSAHADYAQTSTFLKELM--PPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSVEM 465 (525)
Q Consensus 395 ~~~~~v~~i~-~S~Had~~~l~~~i~~~~--P~~vi~vHGe~~~~~~l~~~l~~~~~~~~~~i~~p~~g~~~~~ 465 (525)
+++|+++.++ ||||||++||++|++.++ |++|||||||++++..|++.++++++ .++++|+|||++++
T Consensus 580 ~v~~~v~~i~g~SgHad~~eL~~~i~~~~~~P~~vi~vHGe~~~~~~la~~~~~~~g---~~~~~p~~g~~~~l 650 (651)
T 3af5_A 580 KVNMEVHTIDGFSGHADRRELMNYVAKVRPRPERIITVHGEPQKCLDLATSIHRKFG---ISTRAPNNLDTIRL 650 (651)
T ss_dssp ECCSEEEECGGGCSSCCHHHHHHHHHHCBSCCSEEEEESSCHHHHHHHHHHHHHHHC---CEEECCCTTCEEEC
T ss_pred EeEEEEEEcCcccCcCCHHHHHHHHHHhhcCCCEEEEEcCCHHHHHHHHHHHHHhcC---CeEEECCCCCEEEe
Confidence 8999999998 999999999999999998 99999999999999999999987775 48999999999986
No 4
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=100.00 E-value=1.5e-70 Score=599.22 Aligned_cols=439 Identities=28% Similarity=0.498 Sum_probs=364.6
Q ss_pred CCCcEEEEEecCCCccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCC--CC-CCCCccEEEcCCCchhHhcChHHHH
Q 044504 20 EGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFD--EI-DPSAIDVLLITHFHLDHAASLPYFL 96 (525)
Q Consensus 20 ~~~~m~i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~--~~-~~~~Id~IliTH~H~DH~gglp~l~ 96 (525)
+++.|+|++||+++++|+||++|+.++..||||||..+.. +...++.+. +. ++.+||+|||||+|.||+||+++|.
T Consensus 180 ~~~~m~I~~LG~~~evg~s~~LI~~~~~~ILID~G~~~~~-~~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~ 258 (640)
T 2xr1_A 180 KDQWVRVTALGGCKEVGRSCFLLSTPESRILIDCGVNVGS-DENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLF 258 (640)
T ss_dssp SCCCCEEEEEECSSSSBCCEEEEECSSCEEEECCCCBCSS-CSSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHH
T ss_pred CCCceEEEEEecCCCCCCcEEEEEECCeEEEEeCCCCccc-cccccccccccccCCcccCcEEEECCCChhhhccHHHHH
Confidence 4568999999999999999999999999999999987542 123345443 24 6788999999999999999999998
Q ss_pred hhcCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEe-CCEEEEEEeCCCCcCce
Q 044504 97 EKTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEV-NGIKFWCYTAGHVLGAA 175 (525)
Q Consensus 97 ~~~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~gi~v~~~~~gH~~gs~ 175 (525)
+. +++++||++..|.+++..++.++.++.........|+..++......+..+++++.+++ ++++++++++||++||+
T Consensus 259 ~~-~~~~~Iy~t~~t~~ll~~~l~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg~~v~~~~~GH~~Gs~ 337 (640)
T 2xr1_A 259 KY-GYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSA 337 (640)
T ss_dssp HT-TCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSSTTCE
T ss_pred hc-CCCCeEEECHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEecCCEEEEEEcCCCCcCcE
Confidence 63 46789999999999998888887766543334557887777777677889999999999 99999999999999999
Q ss_pred EEEEEECCE--EEEEeecCCCCCcccCccCCCCCCCCcEEEEcCCCCCCC--CCChhHHHHHHHHHHHHHHhcCCeEEEc
Q 044504 176 MFMVDIAGV--RVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQL--HQPRNIREKRFTDVIHSTISQGGRVLIP 251 (525)
Q Consensus 176 ~~~i~~~~~--~ilytGD~~~~~~~~~~~~~~~~~~~D~LI~Esty~~~~--~~~~~~~~~~l~~~i~~~~~~~g~vlip 251 (525)
+|.++.++. +++||||+....+.++.....+..++|+||+||||+++. |+++.+..+.|.+.+.++++.+|+|+||
T Consensus 338 ~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLi~EsT~g~~~~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp 417 (640)
T 2xr1_A 338 ISHFHIGDGLHNVVFTGDYKYEKTRLFDPAVNKFPRVETVISEATYGNANAFQPALKDAEKHLQMVVKNTIERGGIAVIP 417 (640)
T ss_dssp EEEEEETTTTEEEEECCSCCSSCCSSCCCCCCBCSCCSEEEEECTTCSTTCCCCCHHHHHHHHHHHC--------CEEEE
T ss_pred EEEEEECCceEEEEEECCCCCCCccccccccccCCCCcEEEECCCCCCCccCCCCHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 999999888 999999999887766654433356899999999999988 8888888999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHhcCCCCCCCCEEEEChhHHHHHHHHHHhHHhhHHHHHHHh--cCCCCCCCCCCcccCCccc-
Q 044504 252 AFALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIRNQF--ANSNPFKFKHISPLNSIDD- 328 (525)
Q Consensus 252 ~fa~gr~qell~~l~~~~~~~~~~~~~pI~~~s~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~pf~~~~~~~~~~~~~- 328 (525)
+|++||+||++++|+++|++. .++++|||+++ ++.+++.+|.++.+|++..+++.+ ...+||.++++..+.+.++
T Consensus 418 ~favGR~qell~~l~~~~~~~-~~~~~~V~~dg-~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 495 (640)
T 2xr1_A 418 AFAVGRSQEVMIVLEESIRKG-LIPEVPVYLDG-MIWEATAIHATHPEYLNNDLRKLIFQKGQNPFLSECFKPVDSHEAR 495 (640)
T ss_dssp CCTTTHHHHHHHHHHHHHHHT-SSCCCCEEEES-SHHHHHHHHHHCGGGSCHHHHHHC------CTTCTTEEEEC-CHHH
T ss_pred ecccchHHHHHHHHHHHHHhC-CCCCCcEEEEh-HHHHHHHHHHHhHhhhcHHHHHHHHhcccCcccCCceEEeCCHHHH
Confidence 999999999999999998754 56789999997 999999999999999999877654 4578998888777765322
Q ss_pred --c-CCCCCeEEEeCCCCCCCChHHHHHHHHcCCCCCcEEecccCCCCChhHHhhcCCceeEee--cCe--eeeeeEEEE
Q 044504 329 --F-SDVGPSVVMASPGGLQSGLSRQLFDIWCSDKKNACVIPGYVVEGTLAKTIISEPKEVTLM--NGL--TAPLNMQVH 401 (525)
Q Consensus 329 --~-~~~~p~viia~~gml~~g~~~~~~~~~~~~~~n~ii~~gy~~~gt~~~~l~~~~~~~~~~--~g~--~i~~~~~v~ 401 (525)
+ ...+|+||||++|||++|++++++++|+.+++|+|||+|||++||+|++|.+++.++... .|. .++++|+++
T Consensus 496 ~~~~~~~~~~vIiat~gm~~gg~~~~~l~~~~~~~~~~vi~sg~~~~gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~ 575 (640)
T 2xr1_A 496 QKIIQNPQPCVILATSGMMNGGPVMEYFKAFAEDPRNTLVFVGYQADGTIGRRIQKGWKEIPMTGKNGSTEMLKMNMEVQ 575 (640)
T ss_dssp HHC----CCCEEEESCTTSSSSHHHHHHHHHSSCTTCEEEECSCCCTTCHHHHHHTTCCC-----------CCCCCSEEE
T ss_pred HHHhcCCCCeEEEeCCCccCCChHHHHHHHhhCCCCCEEEEecCCCCCCHHHHHhhccceeeeeccCCCceEEeeeEEEE
Confidence 2 336899999999999999999999999999999999999999999999999888765432 477 788999999
Q ss_pred Eee-cccCCCHHHHHHHHHhcC--CCeEEEecCCHhHHHHHHHHHHHHhccCCceEeeCCCCCEEEE
Q 044504 402 YIS-FSAHADYAQTSTFLKELM--PPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSVEM 465 (525)
Q Consensus 402 ~i~-~S~Had~~~l~~~i~~~~--P~~vi~vHGe~~~~~~l~~~l~~~~~~~~~~i~~p~~g~~~~~ 465 (525)
.++ ||||||++||++|++.++ |++|||||||++++..|++.++++++ .++++|+|||+++|
T Consensus 576 ~i~g~SgHad~~eL~~~i~~~~~~P~~vi~vHGe~~~~~~~a~~~~~~~g---~~~~~p~~g~~~~l 639 (640)
T 2xr1_A 576 VVDGFSGHSDRRQLMEYVKRMQPRPERVFTEHGDEKACVDLASSVYKKLK---IETRALTNLETVRL 639 (640)
T ss_dssp ECCCCSCSCCHHHHHHHHHTCBSCCSEEEEESSCHHHHHHHHHHHHHHHC---CEEEECCTTCEEEC
T ss_pred EEccccccCCHHHHHHHHHHhccCCCEEEEECCCHHHHHHHHHHHHHHcC---CeEEeCCCCCEEEe
Confidence 998 999999999999999998 99999999999999999999987775 48999999999986
No 5
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=100.00 E-value=4.2e-70 Score=596.28 Aligned_cols=440 Identities=31% Similarity=0.547 Sum_probs=380.1
Q ss_pred CCCcEEEEEecCCCccCCcEEEEEECCeEEEEecCCCCCcC-ccccCCCCC--CCCCCCccEEEcCCCchhHhcChHHHH
Q 044504 20 EGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYS-GMAALPYFD--EIDPSAIDVLLITHFHLDHAASLPYFL 96 (525)
Q Consensus 20 ~~~~m~i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~-~~~~~~~~~--~~~~~~Id~IliTH~H~DH~gglp~l~ 96 (525)
++++|+|++||+++++|+||++|+.++..||||||+.++.. +...++.+. ..++.+||+|||||+|.||+||+++|.
T Consensus 176 ~~~~m~i~~LG~~~evg~s~~lI~~~~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~ 255 (636)
T 2ycb_A 176 DNDWARLTAMGGFREVGRSCLYLQTPNSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLY 255 (636)
T ss_dssp CCCCCEEEEEESSSSSSCCEEEEECSSCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHH
T ss_pred CCCeEEEEEEecCCCCCCCEEEEEECCeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcCHHHHH
Confidence 45679999999999999999999999999999999875421 122344443 356789999999999999999999998
Q ss_pred hhcCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEe-CCEEEEEEeCCCCcCce
Q 044504 97 EKTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEV-NGIKFWCYTAGHVLGAA 175 (525)
Q Consensus 97 ~~~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~gi~v~~~~~gH~~gs~ 175 (525)
+. +++++||++++|.+++..++.++.++.........|+..++......+..+++++.+++ ++++++++++||++|++
T Consensus 256 ~~-~~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~Gs~ 334 (636)
T 2ycb_A 256 HY-GYDGPVYCTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGHILGSA 334 (636)
T ss_dssp HT-TCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECCSSTTCE
T ss_pred hc-CCCCeEEEcchHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEecCCeEEEEeCCCCCCCcE
Confidence 63 46889999999999998888877665543334557888777777778889999999999 99999999999999999
Q ss_pred EEEEEECCE--EEEEeecCCCCCcccCccCCCCCCCCcEEEEcCCCCCCC--CCChhHHHHHHHHHHHHHHhcCCeEEEc
Q 044504 176 MFMVDIAGV--RVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQL--HQPRNIREKRFTDVIHSTISQGGRVLIP 251 (525)
Q Consensus 176 ~~~i~~~~~--~ilytGD~~~~~~~~~~~~~~~~~~~D~LI~Esty~~~~--~~~~~~~~~~l~~~i~~~~~~~g~vlip 251 (525)
+|.++.+++ +++||||+....+.++..+.....++|+||+||||++.. |+++...++.|.+.+.++++.+|+++||
T Consensus 335 ~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~D~LI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp 414 (636)
T 2ycb_A 335 MAHLHIGDGQHNMVYTGDFKYEQSRLLEAAANRFPRIETLVMESTYGGHEDVQPSRNRAEKELVKTIYSTLRRGGKILIP 414 (636)
T ss_dssp EEEEEETTTTTCEEECCSCCSSCCSSSCCCCCCCSCCSEEEEECTTCSGGGCCCCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEEEEECCCeEEEEEECCCCCCcccccCCcccCCCCCeEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 999999888 999999999888766654433356899999999999988 8888888899999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHhcCCCCCCCCEEEEChhHHHHHHHHHHhHHhhHHHHHHHh--cCCCCCCCCCCcccCCcc--
Q 044504 252 AFALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIRNQF--ANSNPFKFKHISPLNSID-- 327 (525)
Q Consensus 252 ~fa~gr~qell~~l~~~~~~~~~~~~~pI~~~s~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~pf~~~~~~~~~~~~-- 327 (525)
+|++||+||++++++++|++ +.++++|||+++ ++.+++.+|..+.+|++..+++.+ ...+||.++++..+.+.+
T Consensus 415 ~fa~GR~qell~~l~~~~~~-~~~~~~~V~~dg-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 492 (636)
T 2ycb_A 415 VFAVGRAQELMIVLEEYIRT-GIIDEVPVYIDG-MIWEANAIHTARPEYLSKDLRDQIFHMGHNPFISDIFHKVNGMDER 492 (636)
T ss_dssp CCTTTHHHHHHHHHHHHHHT-TSSCCCCEEEEH-HHHHHHHHHHHSGGGSCHHHHHHHHTTCCCGGGCTTEEEECCHHHH
T ss_pred ECCCcHHHHHHHHHHHHHHh-CCCCCCeEEEeh-HHHHHHHHHHHhHHhhCHHHHHHHHhccCCcccCCceEEeCCHHHH
Confidence 99999999999999999975 356789999995 999999999999999998877654 557899888777666432
Q ss_pred -ccCCCCCeEEEeCCCCCCCChHHHHHHHHcCCCCCcEEecccCCCCChhHHhhcCCceeEee--cCe--eeeeeEEEEE
Q 044504 328 -DFSDVGPSVVMASPGGLQSGLSRQLFDIWCSDKKNACVIPGYVVEGTLAKTIISEPKEVTLM--NGL--TAPLNMQVHY 402 (525)
Q Consensus 328 -~~~~~~p~viia~~gml~~g~~~~~~~~~~~~~~n~ii~~gy~~~gt~~~~l~~~~~~~~~~--~g~--~i~~~~~v~~ 402 (525)
.+...+|+|||+++|||++|+++++|++|+.+++|+|+|+||+++||+|++|.++..++... .|+ .++++|+++.
T Consensus 493 ~~l~~~~~~vIiat~gm~~gg~~~~~l~~~~~~~~~~vi~sg~~~~Gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~ 572 (636)
T 2ycb_A 493 REIVEGEPSIILSTSGMLTGGNSLEYFKWLCEDPDNSLVFVGYQAEGSLGRRIQKGWKEIPLKDEDDKMRVYNVRMNIKT 572 (636)
T ss_dssp HHHHHSSSCEEEESCSSSSSHHHHHHHHHHTTCTTSEEEECSCCCSSSHHHHHHTTCCEEEEECSSSCEEEEECCSEEEE
T ss_pred HHhccCCCEEEEecCCccCCChHHHHHHHHhCCCCCEEEEecCCCCCCHHHHhhcCCceeeeeccCCceeEEEeEEEEEE
Confidence 23236899999999999999999999999999999999999999999999999888766543 487 8889999999
Q ss_pred ee-cccCCCHHHHHHHHHhcC--CCeEEEecCCHhHHHHHHHHHHHHhccCCceEeeCCCCCEEEE
Q 044504 403 IS-FSAHADYAQTSTFLKELM--PPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSVEM 465 (525)
Q Consensus 403 i~-~S~Had~~~l~~~i~~~~--P~~vi~vHGe~~~~~~l~~~l~~~~~~~~~~i~~p~~g~~~~~ 465 (525)
++ ||||||++||++|++.++ |++|||||||++++..|++.++++++ .++++|+|||+++|
T Consensus 573 i~~~SgHad~~eL~~~i~~~~~~Pk~vi~vHGe~~~~~~~a~~~~~~~g---~~~~~p~~g~~~~l 635 (636)
T 2ycb_A 573 IEGFSGHSDRRQLMEYVKRISPKPEKILLCHGDNYKTLDLASSIYRTYR---IETKTPLNLETVRI 635 (636)
T ss_dssp CCSCCSSCCHHHHHHHHHSCSSCCSEEEEESSCHHHHHHHHHHHHHHHC---CEEECCCTTCEEEC
T ss_pred ECCcceeCCHHHHHHHHHHhccCCCEEEEECCCHHHHHHHHHHHHHHcC---CcEEeCCCCCEEEe
Confidence 98 999999999999999998 99999999999999999999977775 48999999999986
No 6
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=100.00 E-value=5.7e-56 Score=486.97 Aligned_cols=352 Identities=17% Similarity=0.266 Sum_probs=284.8
Q ss_pred EEEEEe-cCCCccCCcEEEEEECCeEEEEecCCCCCcCcccc-CCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcC-
Q 044504 24 LIITPL-GAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAA-LPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTT- 100 (525)
Q Consensus 24 m~i~~L-G~~~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~-~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~- 100 (525)
|++++| |+++++|+|||+|+.++..||||||+.++...... ...+....+ +||+|||||+|.||+||+|+|..+++
T Consensus 1 m~~t~L~gg~~ev~~n~~LIe~~~~~ILID~G~~~~~~~~~~~l~~L~~~~~-~IdaVlLTH~H~DHiGgLp~L~~~~~~ 79 (717)
T 2i7x_A 1 MTYKYNCCDDGSGTTVGSVVRFDNVTLLIDPGWNPSKVSYEQCIKYWEKVIP-EIDVIILSQPTIECLGAHSLLYYNFTS 79 (717)
T ss_dssp CCEEEEECCSSSSSCCCEEEEETTEEEEECCCCCTTTSCHHHHHHHHHTTGG-GCCEEECCCSSHHHHTTHHHHHHHSHH
T ss_pred CEEEEEeecCCCCCCCEEEEEECCeEEEEeCCCCcccchhhhHHHHHHhcCC-CCCEEEECCCChHHHCCHHHHHHhhhh
Confidence 578888 55568999999999999999999998753111000 011112333 89999999999999999999987532
Q ss_pred ---CCceEEecHHHHHHHHHHHHHHHhhhccccC--CCCCCHHHHHHHhcccEEecCCcEEEe----CCEEEEEEeCCCC
Q 044504 101 ---FKGRVFMTHATKAIYKLLLTDYVKVSKVSVE--DMLFDEQDINRSMDKIEVLDFHQTVEV----NGIKFWCYTAGHV 171 (525)
Q Consensus 101 ---~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~----~gi~v~~~~~gH~ 171 (525)
.+++||+|++|..+++.++.+..+....... .++|+..++...+..+..+.+++.+.+ ++++|+++++||+
T Consensus 80 g~~~~~pIY~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~~aGHs 159 (717)
T 2i7x_A 80 HFISRIQVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVC 159 (717)
T ss_dssp HHHHTCEEEEEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEECSSS
T ss_pred cccCCceEEecchhHHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEECCCCC
Confidence 3689999999999999888887665543221 246788888777778999999999999 8999999999999
Q ss_pred cCceEEEEEECCEEEEEeecCCCCCcccCccCCC---------CCCCCcEEEEcCCCCCCCCCChhHHHHHHHHHHHHHH
Q 044504 172 LGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAEL---------PQFSPDICIIESTYGVQLHQPRNIREKRFTDVIHSTI 242 (525)
Q Consensus 172 ~gs~~~~i~~~~~~ilytGD~~~~~~~~~~~~~~---------~~~~~D~LI~Esty~~~~~~~~~~~~~~l~~~i~~~~ 242 (525)
+|+++|.|+.++.+|+||||++...+.++..+.+ ...++|+||+||||+...|+.+ +..++|.+.+.+++
T Consensus 160 ~Gs~~~~I~~~~~~IvytGD~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI~EsTy~~~~h~~~-~~~~~l~~~i~~~l 238 (717)
T 2i7x_A 160 PGGSIWCISTYSEKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTLDRFGSSQPFK-KRSKIFKDTLKKGL 238 (717)
T ss_dssp TTCEEEEEECSSCEEEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECCSCCCCSSCHH-HHHHHHHHHHHHHT
T ss_pred CCcEEEEEEeCCCEEEEECCCCCCcccccCccccccccchhHHhccCCcEEEEcCCCCCCCCCCH-HHHHHHHHHHHHHH
Confidence 9999999999999999999999887766543321 1348999999999999988765 45668999999999
Q ss_pred hcCCeEEEcccchhhHHHHHHHHHHHH-h--cCCCCCCCCEEEEChhHHHHHHHHHHhHHhhHHHHHHHhcC-C--CCCC
Q 044504 243 SQGGRVLIPAFALGRAQELLLILDEYW-S--NHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIRNQFAN-S--NPFK 316 (525)
Q Consensus 243 ~~~g~vlip~fa~gr~qell~~l~~~~-~--~~~~~~~~pI~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~-~--~pf~ 316 (525)
+++|+|+||+|++||+||++++|.++| + +.+.++++|||++|+++.+++++|+.+.+||++.+++.+.. . +||.
T Consensus 239 ~~~G~VlIp~fa~gR~qell~~l~~~~~~~~~~~~~~~~pI~l~g~~a~~~~~i~~~~~e~l~~~~~~~~~~~~~~~pf~ 318 (717)
T 2i7x_A 239 SSDGSVIIPVDMSGKFLDLFTQVHELLFESTKINAHTQVPVLILSYARGRTLTYAKSMLEWLSPSLLKTWENRNNTSPFE 318 (717)
T ss_dssp STTCEEEEEECTTTHHHHHHHHHHHHHTTC-------CCCEEEECTTTTHHHHHHHTCGGGSCHHHHHHHHSSSSCCTTC
T ss_pred hCCCeEEEEeccchHHHHHHHHHHHhhhhhhccccCCCceEEEECHHHHHHHHHHHHHHHHhChHHHHHHhcccccCCcc
Confidence 999999999999999999999999998 3 34556789999999999999999999999999988777743 3 4998
Q ss_pred -CCCCcccCCccccCC-CCCeEEEeCCCCCCCChHHHHHHHHcCCCCCcEEecccCC-CCChhHHhhc
Q 044504 317 -FKHISPLNSIDDFSD-VGPSVVMASPGGLQSGLSRQLFDIWCSDKKNACVIPGYVV-EGTLAKTIIS 381 (525)
Q Consensus 317 -~~~~~~~~~~~~~~~-~~p~viia~~gml~~g~~~~~~~~~~~~~~n~ii~~gy~~-~gt~~~~l~~ 381 (525)
|++++. .+.+++.. ++|+||+|| | ++|+++++|++|+.+++|+|||+||++ +||+|++|++
T Consensus 319 ~~~~l~~-~~~~~l~~~~~p~VI~aS-G--~gG~~~~~L~~~a~~~~n~VIf~g~~~p~gTlgr~l~~ 382 (717)
T 2i7x_A 319 IGSRIKI-IAPNELSKYPGSKICFVS-E--VGALINEVIIKVGNSEKTTLILTKPSFECASSLDKILE 382 (717)
T ss_dssp CTTTEEE-CCGGGGGGCCSCEEEEEE-S--CHHHHHHHHHHHSSCTTEEEEECSSCCTTCHHHHHHHH
T ss_pred ccccCcc-CCHHHHhhCCCCEEEEEC-C--CCHHHHHHHHHHcCCCcCEEEEEcCCCCCCChHHHHHh
Confidence 788765 45555532 568877775 5 789999999999999999999999999 6999999875
No 7
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=100.00 E-value=2.3e-54 Score=463.32 Aligned_cols=432 Identities=16% Similarity=0.212 Sum_probs=315.2
Q ss_pred CCcEEEEEecCCCccCCcEEEEEECCeEEEEecCCCCCcC---ccc-cCCCCC--CCCCCCccEEEcCCCchhHhcChHH
Q 044504 21 GDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYS---GMA-ALPYFD--EIDPSAIDVLLITHFHLDHAASLPY 94 (525)
Q Consensus 21 ~~~m~i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~---~~~-~~~~~~--~~~~~~Id~IliTH~H~DH~gglp~ 94 (525)
.+.|++++||+.+++|+|||+++.++..+|||||+..... +.+ ..|.+. ...+.+||+|||||+|.||+||+|+
T Consensus 6 ~~~i~i~~lGg~~eiG~n~~li~~~~~~iLID~G~~~~~~~~~g~d~iip~~~~l~~~~~~Id~I~lTH~H~DHiggl~~ 85 (555)
T 3zq4_A 6 NDQTAVFALGGLGEIGKNTYAVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPY 85 (555)
T ss_dssp CCSEEEEEEESBSSSSCCEEEEEETTEEEEEEECCBCCCTTSTTCSEEEECCHHHHTTTTTEEEEEESCCCHHHHTTHHH
T ss_pred CCcEEEEEcCCCCccCCEEEEEEECCeEEEEeCCCCCCccccccccccccCHHHHhcCccCCCEEEECCCchhhhCCHHH
Confidence 5689999999999999999999999999999999852211 111 112221 1356899999999999999999999
Q ss_pred HHhhcCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeCCC-CcC
Q 044504 95 FLEKTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAGH-VLG 173 (525)
Q Consensus 95 l~~~~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~gH-~~g 173 (525)
|..+ ++++||+++.|.+++...+.+..... ...+..++++++++++++++++++++| ++|
T Consensus 86 l~~~--~~~pIy~t~~t~~ll~~~l~~~~~~~-----------------~~~~~~v~~g~~~~ig~~~v~~~~~~H~~pg 146 (555)
T 3zq4_A 86 LLRQ--VNIPVYGGKLAIGLLRNKLEEHGLLR-----------------QTKLNIIGEDDIVKFRKTAVSFFRTTHSIPD 146 (555)
T ss_dssp HHTT--CCCCEEECHHHHHHHHHHHHHHSTTT-----------------TCCEEECCTTCCEEETTEEEEEEEEBCSSSS
T ss_pred HHHh--cCceEEECHHHHHHHHHHHHHcCccC-----------------CCceEEeCCCCEEEECCEEEEEEeCCCCCcC
Confidence 9876 47899999999998887765432100 125688999999999999999999888 789
Q ss_pred ceEEEEEECCEEEEEeecCCCCCcccCccCCC------CCCCCcEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHhc-CC
Q 044504 174 AAMFMVDIAGVRVLYTGDYSREEDRHLRAAEL------PQFSPDICIIESTYGVQLHQPRNIREKRFTDVIHSTISQ-GG 246 (525)
Q Consensus 174 s~~~~i~~~~~~ilytGD~~~~~~~~~~~~~~------~~~~~D~LI~Esty~~~~~~~~~~~~~~l~~~i~~~~~~-~g 246 (525)
|++|.++.++++++||||+.....+.....++ ...++|+||+||||+.+.+.. ..++.+.+.+.+++++ +|
T Consensus 147 s~~~~i~~~~~~il~tGD~~~~~~~~~g~~d~~~l~~l~~~~~d~Li~esT~~~~~~~~--~se~~v~~~i~~~~~~~~g 224 (555)
T 3zq4_A 147 SYGIVVKTPPGNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNSENPEFT--MSERRVGESIHDIFRKVDG 224 (555)
T ss_dssp EEEEEEEETTEEEEECCSCBCCSSCSSSCCCHHHHHHHHHTCEEEEEEECTTTTCCSCC--CCHHHHHHHHHHHHHHCCS
T ss_pred cEEEEEEECCcEEEEeCCCCCCCCcCcCccCHHHHHHhcccCCcEEEecCcccCCCCCC--CCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999877654331111 124799999999999976543 3457788888888865 89
Q ss_pred eEEEcccc--hhhHHHHHHHHHHHHhcCCCCCCCCEEEEChhHHHHHHHHHHhHHhhHHHHHHHhcCCCCCCCCCCcccC
Q 044504 247 RVLIPAFA--LGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIRNQFANSNPFKFKHISPLN 324 (525)
Q Consensus 247 ~vlip~fa--~gr~qell~~l~~~~~~~~~~~~~pI~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~~pf~~~~~~~~~ 324 (525)
+|+||+|+ +||+|+++.++.++ +++|+++++.+.++++++++. .+++ .|.. .+...+
T Consensus 225 rvii~~fasnv~R~q~il~~a~~~--------gr~v~v~grs~~~~~~~~~~~-g~l~----------~p~~--~~v~~~ 283 (555)
T 3zq4_A 225 RIIFATFASNIHRLQQVIEAAVQN--------GRKVAVFGRSMESAIEIGQTL-GYIN----------CPKN--TFIEHN 283 (555)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHTT--------TCEEEEESHHHHHHHHHHHGG-GSCC----------CCGG--GEECGG
T ss_pred EEEEEEChhHHHHHHHHHHHHHHH--------CCEEEEeCHHHHHHHHHHHHc-CCcc----------CCcc--cEeCHH
Confidence 99999999 99999999998764 679999999888888877664 2221 1110 011122
Q ss_pred CccccCCCCCeEEEeCCCCCCCChHHHHHHHHcCCCCC--------cEEecccCCCCChhH--HhhcCCceeEeecCeee
Q 044504 325 SIDDFSDVGPSVVMASPGGLQSGLSRQLFDIWCSDKKN--------ACVIPGYVVEGTLAK--TIISEPKEVTLMNGLTA 394 (525)
Q Consensus 325 ~~~~~~~~~p~viia~~gml~~g~~~~~~~~~~~~~~n--------~ii~~gy~~~gt~~~--~l~~~~~~~~~~~g~~i 394 (525)
..+.+. +++.||++|++ .|..+.++.+++.++.+ +|||+||+++||.+. +++++ ....|..+
T Consensus 284 ~~~~~~-~~~~vii~tgs---qGe~~~~L~r~a~~~~~~~~~~~~d~vi~s~~~ipGne~~~~~~~~~----l~~~g~~v 355 (555)
T 3zq4_A 284 EINRMP-ANKVTILCTGS---QGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQ----LYRAGAEV 355 (555)
T ss_dssp GTTTSC-GGGEEEEECCT---TCCTTSHHHHHHSSCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHH----HHHTTCEE
T ss_pred HHhhCC-CCCEEEEeCCC---CchHHHHHHHHhcCCCCccccCCCCEEEEECCCCCCcHHHHHHHHHH----HHHCCCEE
Confidence 222222 34577777765 57778888888776655 999999999999854 22221 11123221
Q ss_pred eeeEEEEEeecccCCCHHHHHHHHHhcCCCeEEEecCCHhHHHHHHHHHHHHhccCCceEeeCCCCCEEEEeeCccchhh
Q 044504 395 PLNMQVHYISFSAHADYAQTSTFLKELMPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSVEMYFNSEKMAK 474 (525)
Q Consensus 395 ~~~~~v~~i~~S~Had~~~l~~~i~~~~P~~vi~vHGe~~~~~~l~~~l~~~~~~~~~~i~~p~~g~~~~~~~~~~~~~~ 474 (525)
... ....+++||||+++||+.|++.++|+++||||||++++..+++.++ +.|....++++|+||+.++|.....+
T Consensus 356 ~~~-~~~~~h~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~~~~~~~~a~-~~G~~~~~~~~~~nG~~~~l~~~~~~--- 430 (555)
T 3zq4_A 356 IHG-PLNDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLAT-DCGIPEENCFIMDNGEVLALKGDEAS--- 430 (555)
T ss_dssp ECS-SSSCCCCCSSCCHHHHHHHHHHSCEEEEEEESBCHHHHHHHHHHHH-HTTCCGGGBCCCCTTCEEEEETTEEE---
T ss_pred Eec-CCcceEEeCCCCHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHH-HcCCCcccEEEccCCCEEEEeCCCce---
Confidence 100 1124799999999999999999999999999999999999999554 45654458999999999999765432
Q ss_pred hhhhhhccCCccCCeEEeEEEeeCCcccccCccchhh
Q 044504 475 TIGRLAEKTPEVGETVSGILVKKGFTYQIMAPDDLHI 511 (525)
Q Consensus 475 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 511 (525)
..+++ +.....|+|..+...++..+.+++.|++
T Consensus 431 ~~~~v----~~g~~~vdg~~~~~~~~~vl~~R~~l~~ 463 (555)
T 3zq4_A 431 VAGKI----PSGSVYIDGSGIGDIGNIVLRDRRILSE 463 (555)
T ss_dssp ECCCC----CCCEEEEETTEETCCCHHHHHHHHHHHH
T ss_pred EecEE----eeCCEEEcCCCcccccchHHHHHHHHHh
Confidence 22333 4444455665555444444444444443
No 8
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=100.00 E-value=1e-51 Score=445.02 Aligned_cols=431 Identities=15% Similarity=0.203 Sum_probs=305.2
Q ss_pred CCCCcEEEEEecCCCccCCcEEEEEECCeEEEEecCCCCCcC---ccc-cCCCCCC--CCCCCccEEEcCCCchhHhcCh
Q 044504 19 REGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYS---GMA-ALPYFDE--IDPSAIDVLLITHFHLDHAASL 92 (525)
Q Consensus 19 ~~~~~m~i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~---~~~-~~~~~~~--~~~~~Id~IliTH~H~DH~ggl 92 (525)
...+.|++++||+++++|+||++++.++..+|||||+..... +.+ .+|.+.. .++.+||+|||||+|.||+||+
T Consensus 12 ~~~~~~~i~~LGg~~eig~n~~li~~~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DHiggl 91 (562)
T 3bk2_A 12 GPQDHVEIIPLGGMGEIGKNITVFRFRDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIGGL 91 (562)
T ss_dssp --CCCEEEEEEESBSBSSCCEEEEEETTEEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHTTH
T ss_pred CCCCcEEEEEecCCCCcCCCEEEEEECCeEEEEECCCCCCccccccccccccchhhhhcCcccCcEEEECCCChHHhCCH
Confidence 346689999999999999999999999999999999753211 111 1122221 2467899999999999999999
Q ss_pred HHHHhhcC---CCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCC-EEEEEEeC
Q 044504 93 PYFLEKTT---FKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNG-IKFWCYTA 168 (525)
Q Consensus 93 p~l~~~~~---~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g-i~v~~~~~ 168 (525)
|+|...+. .+++||+++.|.++++..+.+. ... . ....+..+++++.+++++ ++++++++
T Consensus 92 ~~L~~~~~~~~~~~pIy~~~~t~~~l~~~l~~~----~~~----~--------~~~~~~~v~~g~~~~lg~~~~v~~~~~ 155 (562)
T 3bk2_A 92 PFLLPMIFGKESPVPIYGARLTLGLLRGKLEEF----GLR----P--------GAFNLKEISPDDRIQVGRYFTLDLFRM 155 (562)
T ss_dssp HHHHHHHHCSCCCSEEEEEHHHHHHHHHHHHHT----TCC----S--------TTSEEEEECTTCEEEETTTEEEEEEEC
T ss_pred HHHHHhhccccCCceEEeCHHHHHHHHHHHHHc----CCC----c--------CCceEEEECCCCEEEeCCCEEEEEEEC
Confidence 99987631 1679999999999887665431 000 0 013567889999999998 99999999
Q ss_pred CC-CcCceEEEEEECCEEEEEeecCCCCCcccCc-cCCCC------CCCCcEEEEcCCCCCCCCCChhHHHHHHHHHHHH
Q 044504 169 GH-VLGAAMFMVDIAGVRVLYTGDYSREEDRHLR-AAELP------QFSPDICIIESTYGVQLHQPRNIREKRFTDVIHS 240 (525)
Q Consensus 169 gH-~~gs~~~~i~~~~~~ilytGD~~~~~~~~~~-~~~~~------~~~~D~LI~Esty~~~~~~~~~~~~~~l~~~i~~ 240 (525)
+| ++||++|.++.++++++||||+.....+... ...+. ..++|+||+||||+...+... .+..+.+.+.+
T Consensus 156 ~H~~~gs~~~~i~~~~~~il~tGD~~~~~~~~~g~~~d~~~l~~~~~~~~d~Li~EsT~~~~~g~~~--~e~~v~~~l~~ 233 (562)
T 3bk2_A 156 THSIPDNSGVVIRTPIGTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADATNAERPGYTP--SEMEIAKELDR 233 (562)
T ss_dssp CCSSSSCEEEEEEETTEEEEECCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEEEECTTTTCCSCCC--CHHHHHHHHHH
T ss_pred CCCCcccEEEEEEECCeEEEEcCCCCCCCCCCCCCcccHHHHHHhhccCCCEEEecccCCCCCCCCC--hHHHHHHHHHH
Confidence 99 5899999999999999999999987665431 11110 037999999999997654332 23456666666
Q ss_pred HHh-cCCeEEEcccc--hhhHHHHHHHHHHHHhcCCCCCCCCEEEEChhHHHHHHHHHHhHHhhHHHHHHHhcCCCCCCC
Q 044504 241 TIS-QGGRVLIPAFA--LGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIRNQFANSNPFKF 317 (525)
Q Consensus 241 ~~~-~~g~vlip~fa--~gr~qell~~l~~~~~~~~~~~~~pI~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~~pf~~ 317 (525)
+++ .+|++++|+|+ ++|+|+++.++.++ +.||++.+....+++++|+.. .|++ ..++|.
T Consensus 234 ~~~~~~grvii~~fas~~~r~q~il~~a~~~--------~r~V~v~g~s~~~~~~~~~~~-g~l~--------~~~~~i- 295 (562)
T 3bk2_A 234 VIGRAPGRVFVTTFASHIHRIQSVIWAAEKY--------GRKVAMEGRSMLKFSRIALEL-GYLK--------VKDRLY- 295 (562)
T ss_dssp HHHHCSSCEEEECCTTCHHHHHHHHHHHHHT--------TCEEEEECHHHHHHHHHHHHT-TSCC--------CSSCCB-
T ss_pred HHHhCCCEEEEEEccccchHHHHHHHHHHHh--------CCEEEEEChHHHHHHHHHHhc-Cccc--------CCCCcc-
Confidence 664 68999999999 99999999988764 568998554444777776642 3322 123331
Q ss_pred CCCcccCCccccCCCCCeEEEeCCCCCCCChHHHHHHHH--------cCCCCCcEEecccCCCCChhHH--hhcCCceeE
Q 044504 318 KHISPLNSIDDFSDVGPSVVMASPGGLQSGLSRQLFDIW--------CSDKKNACVIPGYVVEGTLAKT--IISEPKEVT 387 (525)
Q Consensus 318 ~~~~~~~~~~~~~~~~p~viia~~gml~~g~~~~~~~~~--------~~~~~n~ii~~gy~~~gt~~~~--l~~~~~~~~ 387 (525)
..+....+ ..+++||++|+++ |..+..+.+| ..+++|+|||+||+++||+++. +.+.
T Consensus 296 ----~~~~~~~~-~~~~~vi~~tg~~---ge~~~~l~ria~~~h~~~~~~~~~~vi~s~~~~~G~~~~~~~~~~~----- 362 (562)
T 3bk2_A 296 ----TLEEVKDL-PDHQVLILATGSQ---GQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNEEAVNRVINR----- 362 (562)
T ss_dssp ----CTGGGTTS-CGGGEEEEECCTT---SCSHHHHHHHHTTCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHH-----
T ss_pred ----CHHHHhcC-CCCCEEEEEcCCC---chhHHHHHhhhhcccccccCCCCCEEEEECCCCCCCeEehhhhcCc-----
Confidence 11122222 1345677776553 3223345554 3489999999999999997642 2211
Q ss_pred eecCeeeeeeEEE-----EEeecccCCCHHHHHHHHHhcCCCeEEEecCCHhHHHHHHHHHHHHhccCCceEeeCCCCCE
Q 044504 388 LMNGLTAPLNMQV-----HYISFSAHADYAQTSTFLKELMPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQS 462 (525)
Q Consensus 388 ~~~g~~i~~~~~v-----~~i~~S~Had~~~l~~~i~~~~P~~vi~vHGe~~~~~~l~~~l~~~~~~~~~~i~~p~~g~~ 462 (525)
.....+++ ..++||||||++||++|++.++|++|||||||++++..+++.+++ .+....++++|+||+.
T Consensus 363 -----l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~Pk~vipvHGe~~~~~~~~~~~~~-~g~~~~~~~~~~~G~~ 436 (562)
T 3bk2_A 363 -----LYALGAYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPWHGEVRHQMNFKWLAES-MSRPPEKTLIGENGAV 436 (562)
T ss_dssp -----HHHTTCEEECTTTSSSCCCSSCCHHHHHHHHHHHCCSEEEEESBCHHHHHHHHHHHHT-SSSCCSEECCCCTTEE
T ss_pred -----eeeCCCEEEEccCCceEEeCCCCHHHHHHHHHhcCCCEEEEEcCCHHHHHHHHHHHHH-cCCCcceEEECCCCCE
Confidence 11112333 347899999999999999999999999999999999999987664 4553348999999999
Q ss_pred EEEeeCccchhhhhhhhhccCCccCCeEEeEEEeeCCcccccCccchhh
Q 044504 463 VEMYFNSEKMAKTIGRLAEKTPEVGETVSGILVKKGFTYQIMAPDDLHI 511 (525)
Q Consensus 463 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 511 (525)
++|..+..+. .+++ +.....|+|..+....+..+.+++.|++
T Consensus 437 ~~l~~~~~~~---~~~~----~~g~~~vdg~~~~~~~~~vl~dr~~l~~ 478 (562)
T 3bk2_A 437 YRLTRETFEK---VGEV----PHGVLYVDGLGVGDITEEILADRRHMAE 478 (562)
T ss_dssp EEECSSCEEE---EEEC----CCCEEEEETTEEEEECHHHHHHHHHHHH
T ss_pred EEEeCCCeEE---ecEE----eeCCEEECCCCcccCcchHHHHHHHHHh
Confidence 9997654332 3443 5555567777766666666666665554
No 9
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=100.00 E-value=2.6e-44 Score=376.85 Aligned_cols=382 Identities=13% Similarity=0.113 Sum_probs=258.5
Q ss_pred CCcEEEEEecCCCccCCcEEEEEECCeEEEEecCCCCCcCc------------cccCCCCC--------------CCCCC
Q 044504 21 GDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSG------------MAALPYFD--------------EIDPS 74 (525)
Q Consensus 21 ~~~m~i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~~------------~~~~~~~~--------------~~~~~ 74 (525)
.++|+|++||+++++|+||++|+.++..||||||....... ...+|.+. ..++.
T Consensus 4 ~~~m~i~~lG~~~~~g~n~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~ 83 (429)
T 2az4_A 4 KAKTTVTFHSGILTIGGTVIEVAYKDAHIFFDFGTEFRPELDLPDDHIETLINNRLVPELKDLYDPRLGYEYHGAEDKDY 83 (429)
T ss_dssp -CCEEEEEEECTTSSSCCEEEEEETTEEEEECCCCCCCTTCCCSCCCHHHHHHTTSSCCCSSCBCGGGCCCCCSSCCCCC
T ss_pred CCceEEEEeeCCCccCCeEEEEEECCeEEEEecCCCCCcccCCCcchhhhccCCcccCCchhhhcccccccchhhhhccc
Confidence 44699999999999999999999999999999998642100 00123221 34678
Q ss_pred CccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCc
Q 044504 75 AIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQ 154 (525)
Q Consensus 75 ~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 154 (525)
+|++|||||+|.||+||+++|.+ +++||+++.+..++..+..+.. ...+...+.......+..+++++
T Consensus 84 ~i~~v~lTH~H~DHiggl~~l~~----~~~iy~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~g~ 151 (429)
T 2az4_A 84 QHTAVFLSHAHLDHSRMINYLDP----AVPLYTLKETKMILNSLNRKGD--------FLIPSPFEEKNFTREMIGLNKND 151 (429)
T ss_dssp SEEEEECSCSCHHHHTTGGGBCT----TSCEEEEHHHHHHHHHHTTTSC--------SSCCCTTSCTTCCCCCEEECTTC
T ss_pred cCCEEEECCchHHHhCcHhHhcC----CCCEEECHHHHHHHHHHHHhCc--------cccccccccccccceEEEeCCCC
Confidence 89999999999999999999863 5799999999988765321100 00011000001123567889999
Q ss_pred EEEeCCEEEEEEeCCC-CcCceEEEEEECCEEEEEeecCCCCCcccC---ccCCCCCCCCcEEEEcCCCCCCC------C
Q 044504 155 TVEVNGIKFWCYTAGH-VLGAAMFMVDIAGVRVLYTGDYSREEDRHL---RAAELPQFSPDICIIESTYGVQL------H 224 (525)
Q Consensus 155 ~~~~~gi~v~~~~~gH-~~gs~~~~i~~~~~~ilytGD~~~~~~~~~---~~~~~~~~~~D~LI~Esty~~~~------~ 224 (525)
.++++++++++++++| ++|+++|.++.++++++||||+........ ...+. ..++|+||+||||+... +
T Consensus 152 ~~~~g~~~v~~~~~~H~~~gs~~~~i~~~~~~i~~tGD~~~~~~~~~~~~~~~~~-~~~~d~Li~Est~~~~~~~~~~~~ 230 (429)
T 2az4_A 152 VIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFCEK-AKHTELLMMEGVSISFPEREPDPA 230 (429)
T ss_dssp EEEETTEEEEEEECCCSSTTCEEEEEEETTEEEEECCSCCSSSTTHHHHHHHHHH-HTTCSEEEEECCGGGSCCCCCCTT
T ss_pred eEEECCEEEEEEECCCCChhhEEEEEEeCCcEEEECCCcccCCCchHHHHHHHHh-ccCCCEEEECCCCcCccccccccc
Confidence 9999999999999999 689999999999999999999986543210 01111 13899999999998732 1
Q ss_pred CChhHHHHHHHHHHHHHHhc-CCeEEEcccc---hhhHHHHHHHHHHHHhcCCCCCCCCEEEEChhHHHHHHHHHHhHHh
Q 044504 225 QPRNIREKRFTDVIHSTISQ-GGRVLIPAFA---LGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILS 300 (525)
Q Consensus 225 ~~~~~~~~~l~~~i~~~~~~-~g~vlip~fa---~gr~qell~~l~~~~~~~~~~~~~pI~~~s~~a~~~~~~~~~~~~~ 300 (525)
......++.+.+.+.+++++ +++++|+.+. ++|+|++ +.+ .++||+++++++.+++.+|.....+
T Consensus 231 ~~~~~s~~~~~~~i~~~~~~~~~rlil~h~~~~~~~r~~~~---a~~--------~gr~v~~~g~~~~~~~~~~~~~~~~ 299 (429)
T 2az4_A 231 QIAVVSEEDLVQHLVRLELENPNRQITFNGYPANVERFAKI---IEK--------SPRTVVLEANMAALLLEVFGIEVRY 299 (429)
T ss_dssp BCCCCSHHHHHHHHHHHHHTCSSSCEEEEECTTCHHHHHHH---HHH--------CSSEEEEEHHHHHHHHHHHCCCCEE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCcEEEEEeccchHHHHHHH---HHH--------hCCEEEEEChhHHHHHhhccccCee
Confidence 11123345666777777655 4568998877 8888887 232 2679999999988887766221111
Q ss_pred hHHHHHHHhcCCCCCCCCCCcccCCcccc-CCCCCeEEEeCCCCCCCChHHHHHHHHcCCCCCcEEecccCCCCCh---h
Q 044504 301 MNERIRNQFANSNPFKFKHISPLNSIDDF-SDVGPSVVMASPGGLQSGLSRQLFDIWCSDKKNACVIPGYVVEGTL---A 376 (525)
Q Consensus 301 ~~~~~~~~~~~~~pf~~~~~~~~~~~~~~-~~~~p~viia~~gml~~g~~~~~~~~~~~~~~n~ii~~gy~~~gt~---~ 376 (525)
+.... .....+ .. ...-+.+++ ..++++|++ | .|+ ++ + ..++++|||++++.+|+. .
T Consensus 300 ~~~~~----~~~~~~--~~-~~~~~~~~~~~~~~~~ii~----~--~~~--~~--~--l~~~~~vi~s~~~~~g~~~~~~ 360 (429)
T 2az4_A 300 YYAES----GKIPEL--NP-ALEIPYDTLLKDKTDYLWQ----V--VNQ--FD--N--LQEGSLYIHSDAQPLGDFDPQY 360 (429)
T ss_dssp ECSSS----SCCTTS--CG-GGBCCHHHHHHCSSSEEEE----C--CSC--GG--G--SCTTCEEEEESCSSCSTTSHHH
T ss_pred Eeccc----cccccc--Cc-cceecHHHHhhCCCcEEEE----e--cCc--HH--h--hCCCCEEEEeCCCCCcccchHH
Confidence 11000 000000 00 011111222 123445554 2 333 21 2 255699999999999985 4
Q ss_pred HHhhcCCceeEeecCeeeeeeEEEEEeecccCCCHHHHHHHHHhcCCCeEEEecCCHhHHHHHHHHHHHHhccCCceEee
Q 044504 377 KTIISEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNIILVHGESHEMGRLKTKLMTELADCNTKIIT 456 (525)
Q Consensus 377 ~~l~~~~~~~~~~~g~~i~~~~~v~~i~~S~Had~~~l~~~i~~~~P~~vi~vHGe~~~~~~l~~~l~~~~~~~~~~i~~ 456 (525)
.++++. ...+++++..+++|+|||++||++|++.++|++|||||||++++.. .. +.++++
T Consensus 361 ~~~~~~----------~~~~~~~v~~i~~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~~~~-------~~---~~~~~~ 420 (429)
T 2az4_A 361 RVFLDL----------LAKKDITFVRLACSGHAIPEDLDKIIALIEPQVLVPIHTLKPEKLE-------NP---YGERIL 420 (429)
T ss_dssp HHHHHH----------HHHTTCEEEECCCCSSCCHHHHHHHHHHHCCSEEEEESCSCGGGCC-------CT---TSEECC
T ss_pred HHHHHH----------HHhCCCEEEEEeecCCCCHHHHHHHHHhhCCCEEEECCCCchhhhh-------cC---CCcEEE
Confidence 445442 1233466778999999999999999999999999999999987554 11 358999
Q ss_pred CCCCCEEEE
Q 044504 457 PKNCQSVEM 465 (525)
Q Consensus 457 p~~g~~~~~ 465 (525)
|+||++++|
T Consensus 421 ~~~g~~~~l 429 (429)
T 2az4_A 421 PERGEQIVL 429 (429)
T ss_dssp CCTTCEEEC
T ss_pred eCCCcEEeC
Confidence 999999875
No 10
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=282.44 Aligned_cols=271 Identities=15% Similarity=0.206 Sum_probs=190.8
Q ss_pred CCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCC
Q 044504 74 SAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFH 153 (525)
Q Consensus 74 ~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 153 (525)
.+|++|||||+|.||+||++++. +++||+++.|.++++..+... ...+..++++
T Consensus 23 ~~i~ai~lTH~H~DHiggl~~l~-----~~pVy~s~~t~~ll~~~l~~~---------------------~~~~~~~~~~ 76 (336)
T 3zdk_A 23 GTARLFFLSHMHSDHTVGLSSTW-----ARPLYCSPITAHLLHRHLQVS---------------------KQWIQALEVG 76 (336)
T ss_dssp CSSCEEECCCCCGGGSTTCSTTC-----CSCEEECHHHHHHHHHHHCCC---------------------TTTEEECCTT
T ss_pred CCCCEEEECCChHHHHCchHHHc-----CCCEEecHHHHHHHHHhhhhc---------------------ccceEecCCC
Confidence 57999999999999999999963 679999999999887654210 0135677778
Q ss_pred cEEEe-------CCEEEEEEeCCCCcCceEEEEEECCEEEEEeecCCCCCcccCccCCCCCCCCcEEEEcCCCCCCCC--
Q 044504 154 QTVEV-------NGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLH-- 224 (525)
Q Consensus 154 ~~~~~-------~gi~v~~~~~gH~~gs~~~~i~~~~~~ilytGD~~~~~~~~~~~~~~~~~~~D~LI~Esty~~~~~-- 224 (525)
+.+.+ ++++++++++||++|+++|.++.++++++||||++..++...........++|+||+||||+++.+
T Consensus 77 ~~~~i~~~~~~~g~~~v~~~~~~H~~gs~~~~i~~~~~~i~~tGD~~~~~~~~~~~~l~~~~~vD~Li~DsT~~~~~~~~ 156 (336)
T 3zdk_A 77 ESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPALTLGKQIHTLYLDNTNCNPALVL 156 (336)
T ss_dssp SEEEEESSSSSSCEEEEEEEECSSSTTCEEEEEEETTEEEEECCSCCCCGGGGGCGGGSSCCCCSEEEECCTBCCTTCCC
T ss_pred CeEEecCcccccCCEEEEEEECCCCcceEEEEEEeCCceEEEeCCCCCCcccccchhhhccCCccEEEEecCCCCCCCCC
Confidence 87765 789999999999999999999999999999999998776543322112468999999999999865
Q ss_pred CChhHHHHHHHHHHHHHHhcCCeEEEcccchhhHHHHHHHHHHHHhcCCCCCCCCEEEEChhHHHHHHHHHHhHHhhHHH
Q 044504 225 QPRNIREKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNER 304 (525)
Q Consensus 225 ~~~~~~~~~l~~~i~~~~~~~g~vlip~fa~gr~qell~~l~~~~~~~~~~~~~pI~~~s~~a~~~~~~~~~~~~~~~~~ 304 (525)
+++.+..+.+.+.+.++ .+|+|+||+|++||+|+++.++.++ +++|++.+..... ++.
T Consensus 157 pse~~v~~~l~~~i~~~--~~g~vii~~f~vgR~q~i~~~a~~~--------grkV~v~gr~~~~----~~~-------- 214 (336)
T 3zdk_A 157 PSRQEAAHQIVQLIRKH--PQHNIKIGLYSLGKESLLEQLALEF--------QTWVVLSPRRLEL----VQL-------- 214 (336)
T ss_dssp CCHHHHHHHHHHHHHTC--TTSEEEEEECSSSCHHHHHHHHHHH--------TCCEECCHHHHHH----HHH--------
T ss_pred CCHHHHHHHHHHHHHhC--CCCcEEEeecchHHHHHHHHHHHHc--------CCEEEEEhHHHHH----HHh--------
Confidence 45555555555555543 3679999999999999999998876 7899987433221 111
Q ss_pred HHHHhcCCCCCCCCCCcccCCccccCCCCCeEEEeCCCCCCCChHHHHHHHHcCCCCCcEEe--cccCCCCChhHHhhcC
Q 044504 305 IRNQFANSNPFKFKHISPLNSIDDFSDVGPSVVMASPGGLQSGLSRQLFDIWCSDKKNACVI--PGYVVEGTLAKTIISE 382 (525)
Q Consensus 305 ~~~~~~~~~pf~~~~~~~~~~~~~~~~~~p~viia~~gml~~g~~~~~~~~~~~~~~n~ii~--~gy~~~gt~~~~l~~~ 382 (525)
+.-.+.| ...+... .+-......+. +..+.+|. +....|-+ +|+..+|+.
T Consensus 215 ----lg~~~~~-----~~~~~~~-------~i~~~~~~~i~----~~al~r~~-~~~~~i~i~~S~~~ipg~~------- 266 (336)
T 3zdk_A 215 ----LGLADVF-----TVEEKAG-------RIHAVDHMEIC----HSNMLRWN-QTHPTIAILPTSRKIHSSH------- 266 (336)
T ss_dssp ----TTCCSCE-----ESCGGGC-------SEEEEEGGGCS----HHHHHHHH-HHSCEEEEEECSSCCCCSS-------
T ss_pred ----cCCcccc-----CCHhHcC-------CCCcchhheeH----HHHHHhhh-CcCCeEEEEeccccccCCc-------
Confidence 1100111 1111111 12222111111 34455665 33333333 566666632
Q ss_pred CceeEeecCeeeeeeEEEEEeecccCCCHHHHHHHHHhcCCCeEEEec-CCHhH
Q 044504 383 PKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNIILVH-GESHE 435 (525)
Q Consensus 383 ~~~~~~~~g~~i~~~~~v~~i~~S~Had~~~l~~~i~~~~P~~vi~vH-Ge~~~ 435 (525)
.| +..+++|+||+++||+.|++.++|++++||| ||+..
T Consensus 267 -------~~--------~~~vh~S~Ha~~~EL~~~~~~~~P~~~iPvh~ge~~~ 305 (336)
T 3zdk_A 267 -------PD--------IHVIPYSDHSSYSELRAFVAALKPCQVVPIVSRRPCG 305 (336)
T ss_dssp -------TT--------EEEECCCSSCBHHHHHHHHHHHCCSCEEESCTTSCCC
T ss_pred -------cC--------ceeeEecCCCCHHHHHHHHHHhCCCEEEEEECCcCch
Confidence 12 3568999999999999999999999999999 99863
No 11
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=100.00 E-value=2.1e-33 Score=285.65 Aligned_cols=320 Identities=18% Similarity=0.221 Sum_probs=215.2
Q ss_pred EEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHHHHHHH
Q 044504 39 CVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLL 118 (525)
Q Consensus 39 ~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~~~~~ 118 (525)
++++..+|..++||+.-. .+..+||+|||||+|.||+||++. .++++||+++.|.+++...
T Consensus 29 p~~~~~pG~~ilVD~f~~--------------~~~~~IdaI~lTH~H~DHiggl~~-----~~~~pIy~s~~t~~ll~~~ 89 (367)
T 4b87_A 29 PFYKKIPGTGFTVDAFQY--------------GVVEGCTAYFLTHFHSDHYAGLSK-----HFTFPVYCSEITGNLLKNK 89 (367)
T ss_dssp CGGGBCTTSSEEESCCSS--------------SSCTTCCEEECCCCCHHHHTTCST-----TCCSCEEECHHHHHHHHHH
T ss_pred ceEEEECCCeEEEeCCCc--------------CCccCCcEEEECcChHHHhCCccc-----ccCCcEEECHHHHHHHHHH
Confidence 334456788999998521 135789999999999999999993 3578999999999877643
Q ss_pred HHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeCCCCcCceEEEEEE-CCEEEEEeecCCCCCc
Q 044504 119 LTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDI-AGVRVLYTGDYSREED 197 (525)
Q Consensus 119 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~gH~~gs~~~~i~~-~~~~ilytGD~~~~~~ 197 (525)
+. .. ...+..+++++.+.+++++|+++++||++|+++|.++. ++.+++||||+...++
T Consensus 90 l~----~~-----------------~~~~~~l~~g~~~~ig~~~v~~~~agH~~gs~~~~i~~~~g~~il~tGD~~~~~~ 148 (367)
T 4b87_A 90 LH----VQ-----------------EQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFRADPS 148 (367)
T ss_dssp SC----CC-----------------GGGEEECCBTSCEEETTEEEEEEECSSSTTCEEEEEECTTSCEEEECCSCCCCGG
T ss_pred hc----cc-----------------cceEEEeCCCCEEEECCEEEEEEeCCCcCCcEEEEEEcCCCcEEEEecCcccCcc
Confidence 21 00 02567889999999999999999999999999999987 4557999999998776
Q ss_pred ccCccCCCCCCCCcEEEEcCCCCCCC--CCChhHHHHHHHHHHHHHHhcCCeE--EEcccchhhHHHHHHHHHHHHhcCC
Q 044504 198 RHLRAAELPQFSPDICIIESTYGVQL--HQPRNIREKRFTDVIHSTISQGGRV--LIPAFALGRAQELLLILDEYWSNHP 273 (525)
Q Consensus 198 ~~~~~~~~~~~~~D~LI~Esty~~~~--~~~~~~~~~~l~~~i~~~~~~~g~v--lip~fa~gr~qell~~l~~~~~~~~ 273 (525)
... ..++..++|+||+||||+++. ++++.+..+.+.+.+.+.++.+|++ ++|+|++||+|+++.+++++
T Consensus 149 ~~~--~~l~~~~~D~Li~EsTy~~~~~~~ps~~~~~~~~~~~i~~~~~~~g~~~v~~~a~~igr~q~ll~ia~~~----- 221 (367)
T 4b87_A 149 MER--SLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVL----- 221 (367)
T ss_dssp GGG--SGGGTSCCCEEEECCTTCSTTCCCCCHHHHHHHHHHHHHHHHHHCTTEEEEEEESSSCCHHHHHHHHHHT-----
T ss_pred cch--hhhccCCCCEEEEecccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEccchhHHHHHHHHHHHHh-----
Confidence 543 233345899999999999865 3566666677777777777767765 46888999999999999875
Q ss_pred CCCCCCEEEEChhHHHHHHHHHHhHHhhH-HHHHHHhcCCCCCCCCCCcccCCccccCCCCCeEEEeCCCCCCCChHHHH
Q 044504 274 EFHNIPIYYASPLAKKCMAVYQTYILSMN-ERIRNQFANSNPFKFKHISPLNSIDDFSDVGPSVVMASPGGLQSGLSRQL 352 (525)
Q Consensus 274 ~~~~~pI~~~s~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~p~viia~~gml~~g~~~~~ 352 (525)
+++|++....+ ++++. ++ .++...+ +. +...-.|-+++.+.+.......+
T Consensus 222 ---g~ki~v~~~~~----~il~~----l~~~~~~~~~---------------t~---d~~~~~vh~~~~~~~~~~~l~~~ 272 (367)
T 4b87_A 222 ---GSKVGMSQEKY----KTLQC----LNIPEINSLI---------------TT---DMCSSLVHLLPMMQINFKGLQSH 272 (367)
T ss_dssp ---TCCEECCHHHH----HHHHT----TCCTTHHHHE---------------ES---CGGGCSEEEEEGGGCSHHHHHHH
T ss_pred ---CCEEEEeHHHH----HHHHh----cCCchhhhhc---------------cc---CCccceEEEeecCcCCHHHHHHH
Confidence 78999863221 11111 10 0011111 10 11123566666555555555556
Q ss_pred HHHHcCCCCCcEEe--cccCCCCChhHHhhcCCceeEeecCeeeeeeEEEEEeecccCCCHHHHHHHHHhcCCCeEEEec
Q 044504 353 FDIWCSDKKNACVI--PGYVVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNIILVH 430 (525)
Q Consensus 353 ~~~~~~~~~n~ii~--~gy~~~gt~~~~l~~~~~~~~~~~g~~i~~~~~v~~i~~S~Had~~~l~~~i~~~~P~~vi~vH 430 (525)
++....+-...|-| |||.-.... ..+ .. +.- ...-++.++.++||.|+++.||.+|+..++|++|||+|
T Consensus 273 ~~~~~~~~~~~v~~~ptgw~~~~~~-~~~-~~---~~~----~~~~~~~~~~vpySeHss~~EL~~fv~~l~p~~iiptv 343 (367)
T 4b87_A 273 LKKCGGKYNQILAFRPTGWTHSNKF-TRI-AD---VIP----QTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTV 343 (367)
T ss_dssp HHSGGGCCCEEEEEEECC------------CC---CCC----EEETTEEEEEECCCSSCCHHHHHHHHHHHCCSEEEECS
T ss_pred HHHhhcccccEEEEcCcccccCCCC-Ccc-cc---ccc----ccCCceEEEEEeccCCCCHHHHHHHHHhcCCCeEECee
Confidence 66554444444444 576543211 001 10 000 00113567889999999999999999999999999999
Q ss_pred C--CHhHHHHHHHHH
Q 044504 431 G--ESHEMGRLKTKL 443 (525)
Q Consensus 431 G--e~~~~~~l~~~l 443 (525)
+ .......+.+.+
T Consensus 344 ~~~~~~~~~~m~~~~ 358 (367)
T 4b87_A 344 NVGTWKSRSTMEKYF 358 (367)
T ss_dssp SCSSHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHH
Confidence 4 444444444333
No 12
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.88 E-value=3.5e-22 Score=195.46 Aligned_cols=175 Identities=18% Similarity=0.219 Sum_probs=133.4
Q ss_pred CCCCCCCcEEEEEecCCCcc-----CCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhc
Q 044504 16 PVSREGDQLIITPLGAGNEV-----GRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAA 90 (525)
Q Consensus 16 ~~~~~~~~m~i~~LG~~~ev-----g~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~g 90 (525)
.......+|+|++||+++.+ +.||++|+.++..||||||... ...+... +++.+||+||+||.|.||++
T Consensus 17 ~~~~~~~~m~i~~LG~g~~~p~~~~~~~~~li~~~~~~iLiD~G~~~----~~~l~~~--~~~~~i~~v~iTH~H~DH~~ 90 (268)
T 1zkp_A 17 NLYFQSNAMKMTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDCGSGV----LAQLQKY--ITPSDIDAVVLSHYHHDHVA 90 (268)
T ss_dssp -CCCCSSCEEEEEEECBSSSCCTTCCBSEEEEEETTEEEEECCCTTH----HHHHTTT--CCGGGCCEEECSCCCHHHHT
T ss_pred ccccCCCCcEEEEEeCCCCcCCCCCCccEEEEEECCcEEEEECCHHH----HHHHHHh--CCcccCCEEEEecCCchhhC
Confidence 44555667999999988765 5899999999999999999641 1122221 45678999999999999999
Q ss_pred ChHHHHhh---------cCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCE
Q 044504 91 SLPYFLEK---------TTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGI 161 (525)
Q Consensus 91 glp~l~~~---------~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi 161 (525)
|++.|... .....+||++..+.+.++... |. ....+..+..++.++++++
T Consensus 91 gl~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~---------------~~------~~~~~~~~~~g~~~~~g~~ 149 (268)
T 1zkp_A 91 DIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLT---------------HE------PHTKGIPYNPEETLQIGPF 149 (268)
T ss_dssp THHHHHHHHHHHHHHHCCCCCEEEEECSSSHHHHHTTC---------------BT------TTEEEEECCTTSCEEETTE
T ss_pred CHHHHHHHHHhcccccCCCCceEEEeCccHHHHHHhcc---------------cC------CccceEEecCCCeEEECCE
Confidence 99988754 122579999998876543210 10 0124567788889999999
Q ss_pred EEEEEeCCCCcCceEEEEEECCEEEEEeecCCCCCcccCccCCCCCCCCcEEEEcCCCCCC
Q 044504 162 KFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQ 222 (525)
Q Consensus 162 ~v~~~~~gH~~gs~~~~i~~~~~~ilytGD~~~~~~~~~~~~~~~~~~~D~LI~Esty~~~ 222 (525)
+|+++++.|++|+++|+++.++.+++|+||+...++.. .. ..++|+||+|+||...
T Consensus 150 ~v~~~~~~H~~~~~~~~i~~~~~~i~~~GD~~~~~~~~-~~----~~~~d~li~e~~~~~~ 205 (268)
T 1zkp_A 150 SISFLKTVHPVTCFAMRITAGNDIVVYSADSSYIPEFI-PF----TKDADLFICECNMYAH 205 (268)
T ss_dssp EEEEEECCSSSCCEEEEEEETTEEEEECCSCCCCTTHH-HH----HTTCSEEEEECCBCTT
T ss_pred EEEEEECCCCCCceEEEEEECCeEEEEeCCCCCCHHHH-HH----HcCCCEEEEECCCCcc
Confidence 99999999999999999999999999999999755422 11 1379999999999754
No 13
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.87 E-value=3.7e-22 Score=199.11 Aligned_cols=175 Identities=18% Similarity=0.233 Sum_probs=130.9
Q ss_pred cEEEEEecCCCcc-----CCcEEEEEE----CCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChH
Q 044504 23 QLIITPLGAGNEV-----GRSCVYMSY----KGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLP 93 (525)
Q Consensus 23 ~m~i~~LG~~~ev-----g~s~~ll~~----~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp 93 (525)
+|+|++||+++.+ ++||++|+. ++..+|||||.+.. ..+.. ..+++.+||+|||||.|.||++|++
T Consensus 1 ~m~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~~iliD~G~~~~----~~l~~-~~~~~~~i~~i~iTH~H~DH~~gl~ 75 (306)
T 2cbn_A 1 AMNLIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQ----HQLLH-TAFNPGKLDKIFISHLHGDHLFGLP 75 (306)
T ss_dssp CCEEEEEECBSSSCCSSCCBCEEEEECCCSSCCCEEEECCCTTHH----HHHHT-SCCCTTTEEEEECSCCCHHHHTTHH
T ss_pred CeEEEEEEcCCCCCCCCCCCCEEEEEeecCCCCcEEEEECCHHHH----HHHHH-hCCCHHHcCEEEEecCCchhhCChH
Confidence 5899999999976 469999998 88999999996421 11111 1345688999999999999999999
Q ss_pred HHHhhc-----CCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeC
Q 044504 94 YFLEKT-----TFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTA 168 (525)
Q Consensus 94 ~l~~~~-----~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~ 168 (525)
.+.... ..+.+||+++.+.+.++..+..... ...|. ..+..++.++.+++++++|+++++
T Consensus 76 ~l~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~-------~~~~~--------~~~~~~~~g~~~~~~~~~v~~~~~ 140 (306)
T 2cbn_A 76 GLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGS-------WTDYP--------LEIVEIGAGEILDDGLRKVTAYPL 140 (306)
T ss_dssp HHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTC-------CCSSC--------EEEEECCSEEEEECSSEEEEEEEC
T ss_pred HHHHHHHhcCCCCCeEEEcCccHHHHHHHHHHhhcc-------CCCce--------EEEEEcCCCcEeecCCEEEEEEEc
Confidence 987632 1256899999998877655432100 00011 145667778889999999999999
Q ss_pred CCCcCceEEEEEE--------------------------------------------------CCEEEEEeecCCCCCcc
Q 044504 169 GHVLGAAMFMVDI--------------------------------------------------AGVRVLYTGDYSREEDR 198 (525)
Q Consensus 169 gH~~gs~~~~i~~--------------------------------------------------~~~~ilytGD~~~~~~~ 198 (525)
.|..++++|.++. ++.+++|+||+...+..
T Consensus 141 ~H~~~~~gy~i~~~~~~~~~~~~~~~~~gv~~~~~~~~l~~g~~v~~~~G~~~~~~~~~~~~~~g~~i~~sgDt~~~~~~ 220 (306)
T 2cbn_A 141 EHPLECYGYRIEEHDAPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAA 220 (306)
T ss_dssp BSSSCCEEEEEEECCCCCCBCHHHHHHTTCCSSHHHHHHHHTCCCEETTTEECCGGGTBCCCCCCCEEEECCSCBSCSTH
T ss_pred cCCCCccEEEEEecCccCccCHHHHHHcCCCCchHHHHhcCCCeEEcCCCcEEcHHHhcCCCCCCCEEEEeCCCCCHHHH
Confidence 9999999999974 46799999999976642
Q ss_pred cCccCCCCCCCCcEEEEcCCCCCC
Q 044504 199 HLRAAELPQFSPDICIIESTYGVQ 222 (525)
Q Consensus 199 ~~~~~~~~~~~~D~LI~Esty~~~ 222 (525)
... ..++|+||+||||.++
T Consensus 221 -~~~----~~~~D~li~E~t~~~~ 239 (306)
T 2cbn_A 221 -LDL----AKGVDVMVHEATLDIT 239 (306)
T ss_dssp -HHH----HTTCSEEEEECCBCGG
T ss_pred -HHH----hcCCCEEEEECcCChh
Confidence 111 2379999999999864
No 14
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.87 E-value=7.2e-22 Score=198.31 Aligned_cols=175 Identities=21% Similarity=0.269 Sum_probs=130.6
Q ss_pred EEEEEecCCCcc-----CCcEEEEEE---CCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHH
Q 044504 24 LIITPLGAGNEV-----GRSCVYMSY---KGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYF 95 (525)
Q Consensus 24 m~i~~LG~~~ev-----g~s~~ll~~---~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l 95 (525)
|+|++||+++.+ +.||++|+. ++..+|||||... ...+.. .++++.+||+|||||.|.||++|++.+
T Consensus 1 M~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~iLiD~G~~~----~~~l~~-~~~~~~~i~~I~iTH~H~DH~~gl~~l 75 (320)
T 1y44_A 1 MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEAT----QHQMLH-TTIKPRKIEKIFITHMHGDHVYGLPGL 75 (320)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEEETTTTSEEEEECCCTTH----HHHHTT-SSCCGGGEEEEECSBCCGGGTTTHHHH
T ss_pred CEEEEEecCCCCCCccCCCCEEEEEEecCCCcEEEEECCHHH----HHHHHH-cCCCHHHcCEEEEeCCChhhhCCHHHH
Confidence 789999999875 579999999 8999999999642 111111 134567899999999999999999998
Q ss_pred Hhhc---C--CCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeCCC
Q 044504 96 LEKT---T--FKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAGH 170 (525)
Q Consensus 96 ~~~~---~--~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~gH 170 (525)
.... + .+.+||+++.+.+.++..+.... . + ..|. ..+..++.++.+++++++|++++++|
T Consensus 76 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~----~--~-~~~~--------~~~~~~~~g~~~~~~~~~v~~~p~~H 140 (320)
T 1y44_A 76 LGSRSFQGGEDELTVYGPKGIKAFIETSLAVTK----T--H-LTYP--------LAIQEIEEGIVFEDDQFIVTAVSVIH 140 (320)
T ss_dssp HHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTT----C--C-CSSC--------EEEEECCSEEEEECSSEEEEEEECBS
T ss_pred HHHHHhcCCCCCEEEEeCHHHHHHHHHHHHhhc----c--C-CCCc--------eEEEEcCCCceEecCCEEEEEEEccC
Confidence 7642 1 25689999999877665432110 0 0 0010 14566777888999999999999999
Q ss_pred CcCceEEEEEE--------------------------------------------------CCEEEEEeecCCCCCcccC
Q 044504 171 VLGAAMFMVDI--------------------------------------------------AGVRVLYTGDYSREEDRHL 200 (525)
Q Consensus 171 ~~gs~~~~i~~--------------------------------------------------~~~~ilytGD~~~~~~~~~ 200 (525)
+.++++|.++. ++.+++|+||+...+.. .
T Consensus 141 ~~~~~gy~i~~~~~~~~~~~~~~~~~g~~~g~~~~~l~~g~~v~~~~G~i~~~~~~~~~~~~g~~i~~sgDt~~~~~~-~ 219 (320)
T 1y44_A 141 GVEAFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVFSGDTRVSDKL-K 219 (320)
T ss_dssp SSSBEEEEEEECCBCCCC--------------------------------------CCCCBCCCEEEECCSCBCCHHH-H
T ss_pred CCCcceEEEecCCCcCccCHHHHHHcCCCCchhHHHhhCCCeEEcCCCeEEcHHHhcccCCCCCEEEEeCCCCCHHHH-H
Confidence 99999999974 46799999999976532 1
Q ss_pred ccCCCCCCCCcEEEEcCCCCCCC
Q 044504 201 RAAELPQFSPDICIIESTYGVQL 223 (525)
Q Consensus 201 ~~~~~~~~~~D~LI~Esty~~~~ 223 (525)
.. ..++|+||+||||.++.
T Consensus 220 ~~----~~~~D~li~E~t~~~~~ 238 (320)
T 1y44_A 220 EL----ARDCDVMVHEATFAKED 238 (320)
T ss_dssp HH----TTTCSEEEEECCBCTTC
T ss_pred HH----hCCCCEEEEeccCCcch
Confidence 21 23799999999998753
No 15
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.86 E-value=7.8e-22 Score=191.90 Aligned_cols=169 Identities=16% Similarity=0.247 Sum_probs=126.4
Q ss_pred cEEEEEecCCCc-----------------------cCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEE
Q 044504 23 QLIITPLGAGNE-----------------------VGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVL 79 (525)
Q Consensus 23 ~m~i~~LG~~~e-----------------------vg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~I 79 (525)
.|+|++||+|+. .+.+|++|+.++..+|||||... +.. .+.+.+||+|
T Consensus 2 ~~~~~~LGtg~~~g~P~~~c~C~~C~~ar~~~~~~r~~s~~li~~~~~~iLiD~G~~~----~~~-----~~~~~~id~I 72 (258)
T 3g1p_A 2 SLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGLHD----LAD-----RWSPGSFQQF 72 (258)
T ss_dssp CEEEEEEECBCSSCBSCTTCCSHHHHHHHHCGGGCBCBSEEEEEETTEEEEECCCCTT----HHH-----HCCTTSSCEE
T ss_pred ceEEEEEEeCCCCCCccCCcCChhhhhhhhCccccccCceEEEEECCcEEEEECCchH----HHh-----hcCcccCCEE
Confidence 489999999853 35799999999999999999421 111 2345689999
Q ss_pred EcCCCchhHhcChHHHHhhcCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcc-cEEecCCcEEEe
Q 044504 80 LITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDK-IEVLDFHQTVEV 158 (525)
Q Consensus 80 liTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~ 158 (525)
|+||.|.||++|++.+....+.+.+||+++.+..+.. ... . + .... ...+..++.+++
T Consensus 73 liTH~H~DHi~gl~~l~~~~~~~~~v~~~~~~~~~~~-----~~~------~-~---------~~~~~~~~~~~g~~~~~ 131 (258)
T 3g1p_A 73 LLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGCDD-----LFK------H-P---------GLLDFSHTVEPFVVFDL 131 (258)
T ss_dssp ECSCCCHHHHGGGTTTTTCSSSCEEEEECCCSSCSTT-----TTT------S-C---------TTEEEEEECCTTCCEEE
T ss_pred EEccCchhHhCCHHHHhccCCCCeEEEeChhhhhHHH-----Hhc------C-C---------CccccccccCCCCeEEE
Confidence 9999999999999988654444578999987652100 000 0 0 0012 256788999999
Q ss_pred CCEEEEEEeCCCCcCceEEEEEECCEEEEEeecCCCCCcccCccCCCCCCCCcEEEEcCCCCCCC
Q 044504 159 NGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQL 223 (525)
Q Consensus 159 ~gi~v~~~~~gH~~gs~~~~i~~~~~~ilytGD~~~~~~~~~~~~~~~~~~~D~LI~Esty~~~~ 223 (525)
++++|+++++.|+.++++|.++.++++++|+||+...++....... ..++|+||+|+||....
T Consensus 132 g~~~v~~~~~~H~~~~~g~~i~~~~~~i~~~GDt~~~~~~~~~~l~--~~~~Dlli~e~t~~~~~ 194 (258)
T 3g1p_A 132 QGLQVTPLPLNHSKLTFGYLLETAHSRVAWLSDTAGLPEKTLKFLR--NNQPQVMVMDCSHPPRA 194 (258)
T ss_dssp TTEEEEEEECCSSSCCEEEEEECSSCEEEEECSCSSCCHHHHHHHH--HTCCSEEEEECCBSSCS
T ss_pred CCEEEEEEECCCCCCceEEEEEeCCcEEEEECCCCCCCHHHHHHHH--hCCCCEEEEeCCCCCcc
Confidence 9999999999999999999999999999999999976653322221 13799999999997543
No 16
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.83 E-value=3e-20 Score=184.12 Aligned_cols=210 Identities=16% Similarity=0.192 Sum_probs=136.9
Q ss_pred CCCCCCCCCcEEEEEecCCCccC---------------------CcEEEEEE--C-C--eEEEEecCCCCCcCccccCCC
Q 044504 14 DAPVSREGDQLIITPLGAGNEVG---------------------RSCVYMSY--K-G--KTILFDCGIHPAYSGMAALPY 67 (525)
Q Consensus 14 ~~~~~~~~~~m~i~~LG~~~evg---------------------~s~~ll~~--~-~--~~iLiD~G~~~~~~~~~~~~~ 67 (525)
++.....+++|+|++||+|+..| .+|++|+. + | ..+|||||.+.. ..+.
T Consensus 19 ~~~~~~~~~~m~v~~LG~g~~~G~P~~~c~c~~C~~~~~~~~R~~~s~li~~~~~~g~~~~iLID~G~~~~----~~l~- 93 (293)
T 3md7_A 19 PGSMTSPRNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPDFR----MQMI- 93 (293)
T ss_dssp -----CCCSEEEEEEEECBCTTCBSCTTCCCTTSCTTCGGGCBCBCEEEEEEECTTCCEEEEEECCCTTHH----HHHH-
T ss_pred CcccccCCCcEEEEEEeecCCCCcccCCCCCccCCccCCCCcccccEEEEEecCCCCceeEEEEECCccHH----HHHH-
Confidence 44455567889999999887533 38899996 4 4 799999995321 1111
Q ss_pred CCCCCCCCccEEEcCCCchhHhcChHHHHhhc---CCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHh
Q 044504 68 FDEIDPSAIDVLLITHFHLDHAASLPYFLEKT---TFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSM 144 (525)
Q Consensus 68 ~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~---~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~ 144 (525)
.....+||+|||||.|.||++|++.|.... ..+.+||+++.+.+.++..+..... .. ....|. ..
T Consensus 94 --~~~~~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~~~~---~~-~~~~~~------~~ 161 (293)
T 3md7_A 94 --DSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFE---TP-VGSSYP------PI 161 (293)
T ss_dssp --HHTCCCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGGTS---CC-TTCCCC------CC
T ss_pred --hcCCCcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhhhhc---cc-cccCCC------Cc
Confidence 123478999999999999999999876532 3468999999988766543321100 00 000111 01
Q ss_pred cccEEecCCcEEEeCC----EEEEEEeCCCC-cCceEEEEEECCEEEEEeecCCCCCcccCccCCCCCCCCcEEEEcCCC
Q 044504 145 DKIEVLDFHQTVEVNG----IKFWCYTAGHV-LGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTY 219 (525)
Q Consensus 145 ~~~~~i~~~~~~~~~g----i~v~~~~~gH~-~gs~~~~i~~~~~~ilytGD~~~~~~~~~~~~~~~~~~~D~LI~Esty 219 (525)
..+..++.++.+++++ ++|+++++.|. .++++|.++ +++|+||+...++...... .++|+||+|+++
T Consensus 162 ~~~~~l~~g~~~~~g~~~~~~~v~~~~~~H~~~~~~g~~i~----~~~y~gDt~~~~~~~~~~~----~~~Dlli~e~~~ 233 (293)
T 3md7_A 162 LSMHDIAPETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIG----SVVYCTDVSAFPEQSLQYI----KDADVLIIGALQ 233 (293)
T ss_dssp EEEEECCTTCCEEECCTTCCEEEEEEEEEETTEEEEEEEET----TEEEECSCSBCCGGGHHHH----TTCSEEEEECCC
T ss_pred eEEEEcCCCCcEEECCCCCcEEEEEEEecCCCCCEEEEEEe----EEEEECCCCCCCHHHHHHh----cCCCEEEEeCcc
Confidence 2456778889999999 99999999998 699999996 7999999985544333332 379999999986
Q ss_pred CCC--CCCChhHHHHHHHHHHHHHHhcCCeEEEcccc
Q 044504 220 GVQ--LHQPRNIREKRFTDVIHSTISQGGRVLIPAFA 254 (525)
Q Consensus 220 ~~~--~~~~~~~~~~~l~~~i~~~~~~~g~vlip~fa 254 (525)
... .|.+. ++..+.+++. +-.++++..++
T Consensus 234 ~~~~~~H~~~----~~a~~~~~~~--~~k~lvl~H~~ 264 (293)
T 3md7_A 234 YRPHPSHFSL----GEALEWIEKL--SPKRAILTHMH 264 (293)
T ss_dssp SSCBTTBCCH----HHHHHHHHHH--CCSEEEEESBC
T ss_pred CCCCCCCCCH----HHHHHHHHHc--CCCEEEEECCC
Confidence 443 22222 2223333333 33455665565
No 17
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.82 E-value=3.4e-20 Score=189.20 Aligned_cols=191 Identities=20% Similarity=0.213 Sum_probs=122.2
Q ss_pred EEEEEecCCCc-----cCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhh
Q 044504 24 LIITPLGAGNE-----VGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEK 98 (525)
Q Consensus 24 m~i~~LG~~~e-----vg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~ 98 (525)
|+|++||+++. .+.||++|+.++..+|||||.+.. ..+ ....+++.+||+|||||.|.||++|++.|+..
T Consensus 1 M~l~~LGtg~~~p~~~r~~ss~ll~~~~~~iLiD~G~g~~----~~l-~~~~~~~~~id~I~iTH~H~DHi~gl~~l~~~ 75 (368)
T 3zwf_A 1 MDVTFLGTGAAYPSPTRGASAVVLRCEGECWLFDCGEGTQ----TQL-MKSQLKAGRITKIFITHLHGDHFFGLPGLLCT 75 (368)
T ss_dssp CEEEEEECBSSSCCSSSCSSEEEEEETTEEEEECCCTTHH----HHH-HHSSSCGGGEEEEECCCSSGGGTTTHHHHHHH
T ss_pred CEEEEECCCCCCCCCCCCccEEEEEECCeEEEEeCChhHH----HHH-HHcCCChHHCCEEEECCCChHHhCcHHHHHHH
Confidence 79999998885 468999999999999999995311 111 11135567899999999999999999998764
Q ss_pred cC---------CCceEEecHHHHHHHHHHHHHHHhhhcc-------ccCCC-CCCH--HHHH--HHhcccEEecCCc---
Q 044504 99 TT---------FKGRVFMTHATKAIYKLLLTDYVKVSKV-------SVEDM-LFDE--QDIN--RSMDKIEVLDFHQ--- 154 (525)
Q Consensus 99 ~~---------~~~~Iy~t~~t~~~~~~~l~d~~~~~~~-------~~~~~-~~~~--~~~~--~~~~~~~~i~~~~--- 154 (525)
.. ...+||++..+.+.+...+......... ..... .... .... ...........++
T Consensus 76 ~~~~~~~~~~~~~l~iygp~~~~~~l~~~l~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~ 155 (368)
T 3zwf_A 76 ISLQSGSMVSKQPIEIYGPVGLRDFIWRTMELSHTELVFHYVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTIL 155 (368)
T ss_dssp HHHHC------CCEEEEEETTHHHHHHHHHHHTTCCCSSCEEEEEECCCGGGSCC-------------------CCCEEC
T ss_pred hhhccccccCCCCeEEEEcHHHHHHHHHHHHhhCcCCCceEEEEEeecCccccccccccccccccccccCcccccccccc
Confidence 31 2568999999988777654321100000 00000 0000 0000 0000000001122
Q ss_pred ---------EEEeCCEEEEEEeCCCCcCceEEEEEEC-------------------------------------------
Q 044504 155 ---------TVEVNGIKFWCYTAGHVLGAAMFMVDIA------------------------------------------- 182 (525)
Q Consensus 155 ---------~~~~~gi~v~~~~~gH~~gs~~~~i~~~------------------------------------------- 182 (525)
.++.++++|+++++.|...+++|.|+..
T Consensus 156 ~~~~~~~~~~~~~~~~~V~a~~~~H~vp~~gy~i~e~~~~g~~~~ek~~~~gip~G~~~~~Lk~G~~v~~~dG~~i~~~~ 235 (368)
T 3zwf_A 156 LDSEENSYLLFDDEQFVVKAFRLFHRIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENGVTISPQD 235 (368)
T ss_dssp CBTTTTBEEEEECSSEEEEEEEEESSSCEEEEEEEECC------------------------------------------
T ss_pred cccccCceeEEeCCCEEEEEEeccCCCceEEEEEEecCCcCccCHHHHHHcCCCchHHHHhcCCCCeEEecCCEEEEhHH
Confidence 3344789999999999999999999754
Q ss_pred -------CEEEEEeecCCCC-CcccCccCCCCCCCCcEEEEcCCCCCCC
Q 044504 183 -------GVRVLYTGDYSRE-EDRHLRAAELPQFSPDICIIESTYGVQL 223 (525)
Q Consensus 183 -------~~~ilytGD~~~~-~~~~~~~~~~~~~~~D~LI~Esty~~~~ 223 (525)
+.+++|+||+... ....... ..++|+||+|+||.+..
T Consensus 236 v~~~~~~g~~v~~~GDT~~~~~~~~~~~----~~~~Dlli~Eat~~~~~ 280 (368)
T 3zwf_A 236 VLKKPIVGRKICILGDCSGVVGDGGVKL----CFEADLLIHEATLDDAQ 280 (368)
T ss_dssp ------CCCEEEEECSCSEECSSHHHHH----TTTCSEEEEECCSCGGG
T ss_pred hccccccceEEEEEecCCcccchhHHHH----hcCCCEEEEecCCChHH
Confidence 7789999998751 1111111 34799999999998753
No 18
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.79 E-value=1.3e-18 Score=170.96 Aligned_cols=194 Identities=15% Similarity=0.126 Sum_probs=127.0
Q ss_pred EEEEEecCCCccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHh----hc
Q 044504 24 LIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLE----KT 99 (525)
Q Consensus 24 m~i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~----~~ 99 (525)
|+|..+..++ ..+|+++ ++..+|||||.... ..+ ...+.+|++|||||.|.||++|++.|.. .+
T Consensus 1 m~i~~~~~g~--~~~~~~i--~~~~iLiD~G~~~~----~~l----~~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~ 68 (280)
T 2e7y_A 1 MNIIGFSKAL--FSTWIYY--SPERILFDAGEGVS----TTL----GSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGM 68 (280)
T ss_dssp CCEEEEEETT--TEEEEEE--GGGTEEEEECTTHH----HHH----GGGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHS
T ss_pred CEEEEEecCC--ceEEEEE--CCcEEEEECCcchH----HHh----ccCccCCCEEEEeCCchhHHCCHHHHHHHHHHhc
Confidence 4455554332 2356666 57889999996321 111 1245679999999999999999999852 22
Q ss_pred C---CCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeC-----CEEEEEEeCCCC
Q 044504 100 T---FKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVN-----GIKFWCYTAGHV 171 (525)
Q Consensus 100 ~---~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----gi~v~~~~~gH~ 171 (525)
+ .+.+||+++.+. .+...+..+.... .. ..+ ...+..++.++.++++ +++|++++++|+
T Consensus 69 ~~~~~~~~v~~~~~~~-~l~~~~~~~~~~~---~~-~~~--------~~~~~~~~~g~~~~~g~~~~~~~~v~~~~~~H~ 135 (280)
T 2e7y_A 69 GDREKPLDVFYPEGNR-AVEEYTEFIKRAN---PD-LRF--------SFNVHPLKEGERVFLRNAGGFKRYVQPFRTKHV 135 (280)
T ss_dssp GGGCCCEEEEEETTCH-HHHHHHHHHHHHC---GG-GTT--------TEEEEEECTTCCEECCCSSCSCEEEEEEECCSC
T ss_pred cCCCCCCEEEECccHH-HHHHHHHHHhhcc---cC-CCC--------ceEEEEcCCCCEEEeCCcccCCEEEEEEEccCC
Confidence 1 247999999887 6655443221110 00 000 0245778889999998 899999999999
Q ss_pred cC--ceEEEEEE---------------------------------CCEEEEEeecCCCCCcccCccCCCCCCCCcEEEEc
Q 044504 172 LG--AAMFMVDI---------------------------------AGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIE 216 (525)
Q Consensus 172 ~g--s~~~~i~~---------------------------------~~~~ilytGD~~~~~~~~~~~~~~~~~~~D~LI~E 216 (525)
+| +++|.++. ++++++|+||+... .... ..++|+||+|
T Consensus 136 ~~~~~~g~~i~~~~~~l~~~~~g~~~~~~~~l~~~~g~~~~~~~~~g~~i~ysgDt~~~---~~~~----~~~~d~li~e 208 (280)
T 2e7y_A 136 SSEVSFGYHIFEVRRKLKKEFQGLDSKEISRLVKEKGRDFVTEEYHKKVLTISGDSLAL---DPEE----IRGTELLIHE 208 (280)
T ss_dssp SSSCCEEEEEEEEEEEECGGGTTCCHHHHHHHHHHHCTGGGEEEEEEEEEEECCSCSSC---CHHH----HTTCSCEEEE
T ss_pred CCCceEEEEEEEcccccCHhhcCCCHHHHHHHHhhcCCceecCCccCCEEEEECCCChH---HHHh----hcCCCEEEEe
Confidence 99 99999974 35689999999976 1111 2379999999
Q ss_pred CCCCCCC------CCChhHHHHHHHHHHHHHHhcCCeEEEcccch
Q 044504 217 STYGVQL------HQPRNIREKRFTDVIHSTISQGGRVLIPAFAL 255 (525)
Q Consensus 217 sty~~~~------~~~~~~~~~~l~~~i~~~~~~~g~vlip~fa~ 255 (525)
|||.+.. |.+. ++..+.+.++ +..++++..|+.
T Consensus 209 ~t~~~~~~~~~~~H~t~----~~a~~~~~~~--~~~~lvl~H~~~ 247 (280)
T 2e7y_A 209 CTFLDARDRRYKNHAAI----DEVMESVKAA--GVKKVILYHIST 247 (280)
T ss_dssp CCBC--------CCCBH----HHHHHHHHHH--TCCEEEEESCCG
T ss_pred CCcCChhhHHhcCCCCH----HHHHHHHHHc--CCCEEEEEeecC
Confidence 9997653 3222 2333444333 346777777774
No 19
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.79 E-value=1.2e-19 Score=181.57 Aligned_cols=179 Identities=15% Similarity=0.193 Sum_probs=126.2
Q ss_pred cEEEEEecCCCc-------------------------cCCcEEEEEECCeE-EEEecCCCCCcCccccCCC---CCCCCC
Q 044504 23 QLIITPLGAGNE-------------------------VGRSCVYMSYKGKT-ILFDCGIHPAYSGMAALPY---FDEIDP 73 (525)
Q Consensus 23 ~m~i~~LG~~~e-------------------------vg~s~~ll~~~~~~-iLiD~G~~~~~~~~~~~~~---~~~~~~ 73 (525)
+|+|++||+|.. .+++|++|+.++.. ||||||.+... .+..... ..+++.
T Consensus 2 ~M~~~~LGtg~s~G~P~~~C~C~~C~~a~~~~~~~~~R~~ss~li~~~~~~~iLiD~G~~~~~-~l~~~~~l~~~~~~~~ 80 (321)
T 3jxp_A 2 MMYIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLKATARTQSSIALSDDGVHWILCNASPDIRA-QLQAFAPMQPARALRD 80 (321)
T ss_dssp CEEEEEEECBCTTTBTTTTCCSHHHHHHHHTCSCCCCBCBCEEEEESSSSSEEEECCCTTHHH-HHHTCGGGCCCSSSSC
T ss_pred eEEEEEEEeCCCCCCCcCCcCCccchhhhhCCCCCCcccceEEEEEeCCceEEEEeCCchHHH-HHHhcccccccccCCc
Confidence 599999998851 24699999998875 99999964210 1111110 112467
Q ss_pred CCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCC
Q 044504 74 SAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFH 153 (525)
Q Consensus 74 ~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 153 (525)
.+||+|||||.|.||++|++.|.+. .+.+||+++.+.+.+...+. ...... ..+. .-.+..+..+
T Consensus 81 ~~i~~i~lTH~H~DH~~gl~~l~~~--~~~~vy~~~~~~~~l~~~~~-~f~~~~-----~~~~-------~i~~~~i~~g 145 (321)
T 3jxp_A 81 TGINAIVLLDSQIDHTTGLLSLREG--CPHQVWCTDMVHQDLTTGFP-LFNMLS-----HWNG-------GLQWNRIELE 145 (321)
T ss_dssp CSEEEEECSCCCHHHHGGGGGGGGG--CCEEEEECHHHHHHTTTTSC-HHHHHT-----TTTT-------CEEEEECCSS
T ss_pred ccCCEEEECCCChhhhhhHHHHHhc--CCCeEEECHHHHHHHHhhCc-cccccc-----cccC-------ceeEEEcCCC
Confidence 8999999999999999999998653 46799999998776542111 000000 0000 0235677788
Q ss_pred cEEEe---CCEEEEEEeCC--------CC-----cCceEEEEE--ECCEEEEEeecCCCCCcccCccCCCCCCCCcEEEE
Q 044504 154 QTVEV---NGIKFWCYTAG--------HV-----LGAAMFMVD--IAGVRVLYTGDYSREEDRHLRAAELPQFSPDICII 215 (525)
Q Consensus 154 ~~~~~---~gi~v~~~~~g--------H~-----~gs~~~~i~--~~~~~ilytGD~~~~~~~~~~~~~~~~~~~D~LI~ 215 (525)
+++.+ ++++|+++++. |. ..+++|.|+ .++++++|+||+...++...... .++|+||+
T Consensus 146 ~~~~i~~~~~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~~~g~~i~y~~Dt~~~~~~~~~~~----~~~D~li~ 221 (321)
T 3jxp_A 146 GSFVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDEKLLAMM----HGADCLLV 221 (321)
T ss_dssp SCEECTTSTTEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETTTCCEEEEESSCCCCCHHHHHHH----HHCSEEEE
T ss_pred CeEEeccCCCeEEEEEEecCCccccccccccccCCCcEEEEEEecCCCcEEEEECCCCCCCHHHHHHh----cCCCEEEE
Confidence 99999 99999999986 66 378999999 78899999999986554333322 26999999
Q ss_pred cCCCCC
Q 044504 216 ESTYGV 221 (525)
Q Consensus 216 Esty~~ 221 (525)
||||..
T Consensus 222 eat~~~ 227 (321)
T 3jxp_A 222 DGTLWE 227 (321)
T ss_dssp ECCCSS
T ss_pred eCCCCC
Confidence 999854
No 20
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.76 E-value=6.2e-17 Score=154.85 Aligned_cols=147 Identities=19% Similarity=0.217 Sum_probs=115.1
Q ss_pred CCCcEEEEEecCCCccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhc
Q 044504 20 EGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKT 99 (525)
Q Consensus 20 ~~~~m~i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~ 99 (525)
+.+.|+|++|| .|||+|+.++.+||||||.... . ..+..++|+||+||.|.||+ +++.+....
T Consensus 26 ~~~~~~it~lg------~s~~li~~~~~~iliDpg~~~~-----~-----~~~~~~id~VliTH~H~DH~-~~~~l~~~~ 88 (235)
T 3kl7_A 26 SGKELTITFIK------HGSLMLTYDNHSIQVDPVSEYA-----D-----YTTFPKADIILITHEHGDHL-DPKAIQAVE 88 (235)
T ss_dssp TSCEEEEEEEE------TTEEEEEETTEEEEESCCTTTC-----C-----TTSSCCCSEEEECCSSTTTC-CHHHHHHHC
T ss_pred CCCCeEEEEEc------ceEEEEEECCEEEEECCCCCcc-----c-----hhhCCCCCEEEECCCccccC-CHHHHHHhh
Confidence 46789999996 5899999999999999996431 1 11345799999999999999 566655433
Q ss_pred CCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCc-EEEeCCEEEEEEeCCCCcC-----
Q 044504 100 TFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQ-TVEVNGIKFWCYTAGHVLG----- 173 (525)
Q Consensus 100 ~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~gi~v~~~~~gH~~g----- 173 (525)
..+.+||++..+...+ .+...+..++ .+++++++|+++++.|..+
T Consensus 89 ~~~~~v~~~~~~~~~l-----------------------------~~~~~l~~g~~~~~~g~~~i~~~p~~H~~~~~~~~ 139 (235)
T 3kl7_A 89 KSDTEIIANENSQKKL-----------------------------GKGKVLKNGDTDTSISYMKIEAVPAYNTTPGRDKY 139 (235)
T ss_dssp CTTCEEEECHHHHHHH-----------------------------TCSEECCTTCEECCSTTCEEEEEECCCCSTTGGGT
T ss_pred cCCCEEEEcHHHHHHh-----------------------------cCcEEecCCCEEEEECCEEEEEEEeecCCCccccc
Confidence 3478999998775432 1246678888 8999999999999988752
Q ss_pred -----ceEEEEEECCEEEEEeecCCCCCcccCccCCCCCCCCcEEEEcCC
Q 044504 174 -----AAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIEST 218 (525)
Q Consensus 174 -----s~~~~i~~~~~~ilytGD~~~~~~~~~~~~~~~~~~~D~LI~Est 218 (525)
+++|.|+.++.+++|+||+...++.. . ..++|++++++.
T Consensus 140 ~~~~~~~g~~i~~~g~~i~~~GDt~~~~~~~----~--l~~~Dv~il~~~ 183 (235)
T 3kl7_A 140 HPRHRDNGYILTFDGLRVYIAGDTEDIPEMK----D--LKDIDIAFLPVN 183 (235)
T ss_dssp SCTTTSEEEEEEETTEEEEECCSCCSCGGGG----G--CCSCSEEEEECC
T ss_pred cCCCCceEEEEEeCCeEEEEECCCCchhhHH----h--hcCCCEEEECCC
Confidence 58999999999999999999876531 2 237999999985
No 21
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.70 E-value=1.2e-16 Score=157.97 Aligned_cols=155 Identities=16% Similarity=0.173 Sum_probs=107.2
Q ss_pred EEEecCCCccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceE
Q 044504 26 ITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRV 105 (525)
Q Consensus 26 i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~I 105 (525)
+.++|.. +.|||+|+.++..+|||||.......+.......++++.+|++||+||.|.||+||++.|.+.. +.+|
T Consensus 47 v~~~~~~---~~n~~li~~~~~~iLID~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~--~~~v 121 (294)
T 3m8t_A 47 IYYVGTD---GIAVYVIKTSQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKET--GAQL 121 (294)
T ss_dssp EEECCCS---SSCCEEEEETTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHHH--CCEE
T ss_pred EEEeCCC---CeEEEEEEECCceEEEECCCchhHHHHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhcc--CCEE
Confidence 6677654 5799999999999999999732111111100111355678999999999999999999998763 6799
Q ss_pred EecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEe-CCCCcCceEEEEEECCE
Q 044504 106 FMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYT-AGHVLGAAMFMVDIAGV 184 (525)
Q Consensus 106 y~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~-~gH~~gs~~~~i~~~~~ 184 (525)
|+++.+...+..... ..........+. .......+..++.+.+++.+++++. +||++|+++|+++.++.
T Consensus 122 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~------~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~g~~~~~~~~~~~ 191 (294)
T 3m8t_A 122 VAGERDKPLLEGGYY----PGDEKNEDLAFP------AVKVDRAVKEGDRVTLGDTTLTAHATPGHSPGCTSWEMTVKDG 191 (294)
T ss_dssp EEEGGGHHHHHHTCB----TTBTTCGGGCCC------CCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEET
T ss_pred EEChHHHHHHhcccc----cCccccccCCCC------CCCCceEeCCCCEEEeCCEEEEEEeCCCCCccCEEEEEEccCC
Confidence 999998876543210 000000000000 0123366888999999999999876 79999999999986544
Q ss_pred ----EEEEeecCCCC
Q 044504 185 ----RVLYTGDYSRE 195 (525)
Q Consensus 185 ----~ilytGD~~~~ 195 (525)
+++|+||+...
T Consensus 192 ~~~~~~lf~GD~~~~ 206 (294)
T 3m8t_A 192 KEDREVLFFCSGTVA 206 (294)
T ss_dssp TEEEEEEECCCCCCT
T ss_pred CccceEEEEcCccCC
Confidence 89999999743
No 22
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.69 E-value=2.4e-16 Score=153.57 Aligned_cols=162 Identities=20% Similarity=0.276 Sum_probs=114.2
Q ss_pred CCcEEEEEecCCCccCCcEEEEEECCeEEEEecCCCCC-----cCcccc----CCCC-CCCCC----CCccEEEcCCCch
Q 044504 21 GDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPA-----YSGMAA----LPYF-DEIDP----SAIDVLLITHFHL 86 (525)
Q Consensus 21 ~~~m~i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~-----~~~~~~----~~~~-~~~~~----~~Id~IliTH~H~ 86 (525)
+.+|+|+++| .||++|+.++.+|||||++... +.+... .|.. ..+++ .+||+|||||.|.
T Consensus 2 ~~~m~it~lG------ha~~li~~~g~~iLiDp~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~id~iliTH~H~ 75 (264)
T 3rpc_A 2 NAMTQYTHIR------NATGKLTIKNTTFLIDPFLAPKDTYPGFEGTFNYQQRMPMVDLPLSMDDLLSNVTAVVVTHTHL 75 (264)
T ss_dssp -CCCEEEEEE------TTEEEEEETTEEEEESCCCCCTTCBCCCTTBTTTTSCBSSSCCSSCHHHHHTTCCEEECSCCCG
T ss_pred CceEEEEEEe------CcEEEEEECCEEEEeCcccCCCcCccCCCCcccccccCCCCCCCCCHHHccccCCEEEECCCch
Confidence 4589999996 5899999999999999987531 111000 0100 01222 3799999999999
Q ss_pred hHhcChHHHHhhcCCCceEEec-HHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEE
Q 044504 87 DHAASLPYFLEKTTFKGRVFMT-HATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWC 165 (525)
Q Consensus 87 DH~gglp~l~~~~~~~~~Iy~t-~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~ 165 (525)
||+++++.+..+ .+.+||++ ..+...++.. + +.....+ ++++++++++|++
T Consensus 76 DH~~~~~~~~~~--~~~~v~~~~~~~~~~l~~~--------g----------------~~~~~~~--~~~~~~~~~~i~~ 127 (264)
T 3rpc_A 76 DHWDDTAINSIP--KSLPIFVQNTADKELITSQ--------G----------------FIDVRII--FESLEFNGITLRK 127 (264)
T ss_dssp GGSCHHHHHHSC--TTSCEEESSHHHHHHHHHT--------T----------------CSCEEEC--SSEEEETTEEEEE
T ss_pred hhCCCHHHHhhc--cCCeEEEeCHHHHHHHHhc--------C----------------CCeeEEe--cccEEECCEEEEE
Confidence 999999887643 36799998 6665443211 0 0122333 5789999999999
Q ss_pred EeCCCCcC--------------ceEEEEEEC-CEEEEEeecCCCCCcccCccCCCCCCCCcEEEEcCCC
Q 044504 166 YTAGHVLG--------------AAMFMVDIA-GVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTY 219 (525)
Q Consensus 166 ~~~gH~~g--------------s~~~~i~~~-~~~ilytGD~~~~~~~~~~~~~~~~~~~D~LI~Esty 219 (525)
+++-|..+ +++|.|+.+ +++++|+||+.+.++...... ..++|+++++++.
T Consensus 128 ~pa~H~~~~~~~~p~~~~~~~~~~g~~i~~~~~~~i~~~GDt~~~~~~~~~~~---~~~~Dv~il~~g~ 193 (264)
T 3rpc_A 128 TGGSHGTVEMYANPVLAPLAGDAMGVIFEAADEPTVYLVGDTVWTSDVEKALL---RFDPNVIIMNTGY 193 (264)
T ss_dssp ECCCSSCHHHHTSTTHHHHHCCCCEEEEECTTSCCEEECCSCCSCHHHHHHHH---HHCCSEEEEECSC
T ss_pred eccccCCccccccccccccccccEEEEEEeCCccEEEEECCcCchHHHHHHHH---HhCCCEEEEecCc
Confidence 99999974 489999987 789999999998765321111 1258999999974
No 23
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.66 E-value=4.2e-15 Score=151.32 Aligned_cols=169 Identities=16% Similarity=0.220 Sum_probs=115.7
Q ss_pred CCCCcEEEEEecCCCccCCcEEEEEEC-CeEEEEe--cCCCCC---------------cCcccc-C------CC-CCCCC
Q 044504 19 REGDQLIITPLGAGNEVGRSCVYMSYK-GKTILFD--CGIHPA---------------YSGMAA-L------PY-FDEID 72 (525)
Q Consensus 19 ~~~~~m~i~~LG~~~evg~s~~ll~~~-~~~iLiD--~G~~~~---------------~~~~~~-~------~~-~~~~~ 72 (525)
.+.+.|++++||. ||++|+.+ +.+|||| ||.+.. ..+... . |. ++...
T Consensus 33 ~~~~~~~it~lG~------s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~ql~~~~G~~~l~~~~~~~p~~l~~~~ 106 (360)
T 2wyl_A 33 VAPGTFAMWWLGC------TGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFA 106 (360)
T ss_dssp CCTTCEEEEEEET------TEEEEECTTCCEEEESCCCCCCCCCCCC----------------CCCCCCBCSCCCCCGGG
T ss_pred CCCCcEEEEEecc------cEEEEEeCCCCEEEEeecCCCCcccccccccccchhhhhhcCccccCCCcccCCCccCHHH
Confidence 4566799999964 79999995 8999999 775321 001111 1 11 11112
Q ss_pred CCCccEEEcCCCchhHhc--ChHHHHhhcCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEe
Q 044504 73 PSAIDVLLITHFHLDHAA--SLPYFLEKTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVL 150 (525)
Q Consensus 73 ~~~Id~IliTH~H~DH~g--glp~l~~~~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 150 (525)
..+||+|||||.|.||+| ++..+..+...+.+||++..+.+.+... + +. ..++..+
T Consensus 107 l~~id~VliTH~H~DHig~~~l~~l~~~~~~~~~v~~p~~~~~~l~~~--------g-------~~-------~~~~~~l 164 (360)
T 2wyl_A 107 IRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGW--------G-------VP-------KERCIVV 164 (360)
T ss_dssp CCCCSEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHHHHHHHHHH--------T-------CC-------GGGEEEC
T ss_pred cCCCCEEEECCCchhcCCHHHHHHHHhcCCCCCEEEEcHHHHHHHHHc--------C-------CC-------hheEEEc
Confidence 468999999999999997 4556655532267999998876654321 0 00 0256788
Q ss_pred cCCcEEEeCCEEEEEEeCCCC------------c---------CceEEEEEECCEEEEEeecCCCCCcccCccCCCCCCC
Q 044504 151 DFHQTVEVNGIKFWCYTAGHV------------L---------GAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFS 209 (525)
Q Consensus 151 ~~~~~~~~~gi~v~~~~~gH~------------~---------gs~~~~i~~~~~~ilytGD~~~~~~~~~~~~~~~~~~ 209 (525)
+.++.+++++++|+++++.|. + .+++|+|+.++.+++|+||+...++..... + ..+
T Consensus 165 ~~g~~~~~g~~~v~~~~~~H~~~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~~~~~i~-~--~~~ 241 (360)
T 2wyl_A 165 KPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHG-N--EHQ 241 (360)
T ss_dssp CTTCEEEETTEEEEEEECCCC------------------CCTTTBEEEEEEETTEEEEECTTCCCCTTHHHHH-H--HSC
T ss_pred CCCCEEEECCEEEEEEeccCcccccccccccccccccccccCcccEEEEEEECCcEEEEeCCCCcCHHHHHHh-h--CCC
Confidence 899999999999999988664 2 378999999999999999999765532111 1 126
Q ss_pred CcEEEEcCC
Q 044504 210 PDICIIEST 218 (525)
Q Consensus 210 ~D~LI~Est 218 (525)
+|++++...
T Consensus 242 ~Dv~il~~g 250 (360)
T 2wyl_A 242 IDVALGSYG 250 (360)
T ss_dssp CCEEEEEBC
T ss_pred CCEEEecCC
Confidence 899998654
No 24
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.66 E-value=3.4e-16 Score=153.28 Aligned_cols=150 Identities=19% Similarity=0.279 Sum_probs=103.8
Q ss_pred CCcEEEEEECCeEEEEecCCCCCcC----------------------ccccCCCCCCCCCCCccEEEcCCCchhHhcChH
Q 044504 36 GRSCVYMSYKGKTILFDCGIHPAYS----------------------GMAALPYFDEIDPSAIDVLLITHFHLDHAASLP 93 (525)
Q Consensus 36 g~s~~ll~~~~~~iLiD~G~~~~~~----------------------~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp 93 (525)
+.||++|+.++..||||||...... .+.......++++.+|++|++||.|.||+||++
T Consensus 42 ~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~ 121 (276)
T 2r2d_A 42 PVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVE 121 (276)
T ss_dssp EEEEEEEECSSCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCGGGCSEEECSCCSTTTSTTGG
T ss_pred eeEEEEEECCCCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHHHcCCCHHHCCEEEecCcccccCCChh
Confidence 4699999999999999999865321 000000011456778999999999999999999
Q ss_pred HHHhhcCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHH---hcccEEec-CCcEEEeC-CEEEEEEeC
Q 044504 94 YFLEKTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRS---MDKIEVLD-FHQTVEVN-GIKFWCYTA 168 (525)
Q Consensus 94 ~l~~~~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~-~~~~~~~~-gi~v~~~~~ 168 (525)
.| .+.+||+++.+.+.+....... .....|....+... ...+..++ .++.++++ ++++....+
T Consensus 122 ~~-----~~~~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~v~~~~p 189 (276)
T 2r2d_A 122 YF-----GKSRLIAHEDEFATAVRYFATG-------DHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGT 189 (276)
T ss_dssp GC-----SSSEEEEEHHHHHHHHHHHHTT-------CCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEETTEEEEEEES
T ss_pred hC-----CCCEEEECHHHHHHHhcccccc-------ccccccchHHhhhhccccccceeccCCCceeEecCCEEEEeCCC
Confidence 87 2679999998876554322110 00112333333321 13456666 47888885 788888735
Q ss_pred CCCcCceEEEEEECC-EEEEEeecCCCCCc
Q 044504 169 GHVLGAAMFMVDIAG-VRVLYTGDYSREED 197 (525)
Q Consensus 169 gH~~gs~~~~i~~~~-~~ilytGD~~~~~~ 197 (525)
||++|+++|+++.++ .+++|+||+.....
T Consensus 190 gHt~g~~~~~~~~~~~~~vl~~GD~~~~~~ 219 (276)
T 2r2d_A 190 GHASGMLGLAVRLEKQPGFLLVSDACYTAT 219 (276)
T ss_dssp SSSSSEEEEEEECSSSCEEEEEETTSCCHH
T ss_pred CCCceeEEEEEEcCCCceEEEEechhhhHH
Confidence 999999999999877 89999999987553
No 25
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.66 E-value=6.8e-17 Score=158.85 Aligned_cols=151 Identities=19% Similarity=0.285 Sum_probs=98.1
Q ss_pred cCCcEEEEEECCeEEEEecCCCCCcC--------------ccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcC
Q 044504 35 VGRSCVYMSYKGKTILFDCGIHPAYS--------------GMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTT 100 (525)
Q Consensus 35 vg~s~~ll~~~~~~iLiD~G~~~~~~--------------~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~ 100 (525)
++.|||+|+.++..||||||...... .+.......++.+.+||+|++||.|.||+||++.+.++..
T Consensus 46 ~~~n~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~~~~ 125 (280)
T 3esh_A 46 LPTHPILIQTAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAI 125 (280)
T ss_dssp EECCCEEEECSSCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSCCS
T ss_pred EeEEEEEEEECCEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCcccccccccC
Confidence 45799999999999999999864210 0000001124667899999999999999999999876212
Q ss_pred C-CceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEe-CCEEEEEEeCCCCcCceEEE
Q 044504 101 F-KGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEV-NGIKFWCYTAGHVLGAAMFM 178 (525)
Q Consensus 101 ~-~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~gi~v~~~~~gH~~gs~~~~ 178 (525)
| +++||+++.+...+.... .. ....|....+.....++..++.+ ..+ +++++ ...+||++|+++|+
T Consensus 126 fp~a~i~~~~~~~~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~~~~--~~l~~gi~~-~~~pGHt~g~~~~~ 193 (280)
T 3esh_A 126 FENAIHVVQQDEWHEFIAPN---IR------SKSTYWDKNKGDYSNKLILFEKH--FEPVPGIKM-QHSGGHSFGHTIIT 193 (280)
T ss_dssp STTCEEEEEHHHHHHHHSCC---TT------GGGTSCGGGCCGGGGGEEEESSE--ECSSTTEEE-EECCSSSTTCEEEE
T ss_pred CCCCEEEECHHHHHHhhCcc---cc------cccchhhhhhhhhhheEEEeCCC--CeEcCCEEE-EEcCCCCcccEEEE
Confidence 3 689999998776543110 00 00011111111111233444332 233 45666 34689999999999
Q ss_pred EEECCEEEEEeecCCCCCc
Q 044504 179 VDIAGVRVLYTGDYSREED 197 (525)
Q Consensus 179 i~~~~~~ilytGD~~~~~~ 197 (525)
++.++.+++|+||+.+...
T Consensus 194 i~~~~~~vlftGD~~~~~~ 212 (280)
T 3esh_A 194 IESQGDKAVHMGDIFPTTA 212 (280)
T ss_dssp EEETTEEEEECGGGSCSGG
T ss_pred EEECCcEEEEEEccCCchh
Confidence 9999999999999986543
No 26
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.65 E-value=6.2e-15 Score=151.02 Aligned_cols=169 Identities=16% Similarity=0.236 Sum_probs=116.8
Q ss_pred CCCCcEEEEEecCCCccCCcEEEEEEC-CeEEEEe--cCCCCCc---------------Ccccc-C------CC-CCCCC
Q 044504 19 REGDQLIITPLGAGNEVGRSCVYMSYK-GKTILFD--CGIHPAY---------------SGMAA-L------PY-FDEID 72 (525)
Q Consensus 19 ~~~~~m~i~~LG~~~evg~s~~ll~~~-~~~iLiD--~G~~~~~---------------~~~~~-~------~~-~~~~~ 72 (525)
...+.|+++++| .||++|+.+ +.+|||| ||.+... .+... . |. ++...
T Consensus 57 ~~~~~~~it~lG------~s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~q~~~~~G~~~l~p~~~~~p~~l~~~~ 130 (379)
T 3bv6_A 57 VEPNTFSMWWLG------CTGIWLKSAGNTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLDPFA 130 (379)
T ss_dssp CCTTCEEEEEEE------TTEEEEEETTCCEEEESCCCCCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBCSCCCSCGGG
T ss_pred CCCCceEEEEec------ccEEEEEeCCCCEEEEccCCCCCccccccccccccchhheecCccccCccccCCCCccChHH
Confidence 346679999996 479999996 8999999 7753210 01111 1 11 11112
Q ss_pred CCCccEEEcCCCchhHhc--ChHHHHhhcCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEe
Q 044504 73 PSAIDVLLITHFHLDHAA--SLPYFLEKTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVL 150 (525)
Q Consensus 73 ~~~Id~IliTH~H~DH~g--glp~l~~~~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 150 (525)
..+||+|||||.|.||+| ++..+.++.+.+.+||++..+.+.+... + +. ..++..+
T Consensus 131 ~~~iD~IliTH~H~DHig~~~l~~l~~~~~~~~~v~~~~~~~~~l~~~--------g-------~~-------~~~~~~l 188 (379)
T 3bv6_A 131 IKEIDAVLASHDHADHIDVNVAAAVLQNCGEHVKFIGPQACVDLWLGW--------G-------VP-------QERCIVA 188 (379)
T ss_dssp CCCCSEEECSBCSGGGCCHHHHHHHHHHSCTTCEEEECHHHHHHHHHH--------T-------CC-------GGGEEEC
T ss_pred CCCCCEEEECCCCcccCChHHHHHHHhcCCCCcEEEecHHHHHHHHHc--------C-------CC-------hhhEEEe
Confidence 568999999999999997 5666655532267999998876654321 0 00 0256788
Q ss_pred cCCcEEEeCCEEEEEEeCCCC-------------c---------CceEEEEEECCEEEEEeecCCCCCcccCccCCCCCC
Q 044504 151 DFHQTVEVNGIKFWCYTAGHV-------------L---------GAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQF 208 (525)
Q Consensus 151 ~~~~~~~~~gi~v~~~~~gH~-------------~---------gs~~~~i~~~~~~ilytGD~~~~~~~~~~~~~~~~~ 208 (525)
+.++.+++++++|+++++.|. . ++++|.|+.++.+++|+||+...++.... .+ ..
T Consensus 189 ~~g~~~~~g~~~v~~~~~~H~~~~~~~p~~h~~~~G~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~~~~~i-~~--~~ 265 (379)
T 3bv6_A 189 KVGDVLEIGDVKIRVLDSFDRTALVTLPKGVSSYDKAILDGMDERAVNYLIETSGGSVYHSGDSHYSNYYAKH-GN--DY 265 (379)
T ss_dssp CTTCEEEETTEEEEEEECCCHHHHTCCCTTSCSSCGGGGGCHHHHBEEEEEEETTEEEEECTTCCCCTTHHHH-HH--HS
T ss_pred CCCCEEEECCEEEEEEecccccccccccccccccccccccccCCceEEEEEEeCCeEEEEeCCCCccHHHHHH-hh--cC
Confidence 899999999999999998774 2 37899999999999999999976553211 11 12
Q ss_pred CCcEEEEcCC
Q 044504 209 SPDICIIEST 218 (525)
Q Consensus 209 ~~D~LI~Est 218 (525)
++|++++...
T Consensus 266 ~~Dv~il~~g 275 (379)
T 3bv6_A 266 QIDVALLSYG 275 (379)
T ss_dssp CCSEEEEEBC
T ss_pred CCCEEEecCC
Confidence 6899998654
No 27
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.65 E-value=2.5e-16 Score=152.40 Aligned_cols=154 Identities=16% Similarity=0.202 Sum_probs=102.5
Q ss_pred CcEEEEEecCCC------------------ccCCcEEEEEECCeEEEEecCCCCCcCc--------------------cc
Q 044504 22 DQLIITPLGAGN------------------EVGRSCVYMSYKGKTILFDCGIHPAYSG--------------------MA 63 (525)
Q Consensus 22 ~~m~i~~LG~~~------------------evg~s~~ll~~~~~~iLiD~G~~~~~~~--------------------~~ 63 (525)
..|+++.|++|. +++.||++|+.++..||||||....... ..
T Consensus 6 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~lI~~~~~~iLiDtG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 85 (254)
T 3dha_A 6 TVKKLYFIPAGRCMLDHSSVNSALTPGKLLNLPVWCYLLETEEGPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEED 85 (254)
T ss_dssp CBSEEEEEEEEEEEEEGGGTSTTSCSCCEEEEEEEEEEEEETTEEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBCGGG
T ss_pred CceEEEEecCccEEechhhccCCCCCCceEEEeeEEEEEECCCccEEEECCCChhhhcccccccccccccccccccCchh
Confidence 346777776654 3457999999999999999998532100 00
Q ss_pred c-CCCC--CCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHH
Q 044504 64 A-LPYF--DEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDI 140 (525)
Q Consensus 64 ~-~~~~--~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 140 (525)
. ...+ .++++.+|++|++||.|.||+||++.|. +.+||+++.+.+.+.... .|... .
T Consensus 86 ~l~~~l~~~g~~~~~I~~VilTH~H~DH~gg~~~~~-----~~~i~~~~~~~~~~~~~~--------------~~~~~-~ 145 (254)
T 3dha_A 86 RIVNILKRVGYEPDDLLYIISSHLHFDHAGGNGAFT-----NTPIIVQRTEYEAALHRE--------------EYMKE-C 145 (254)
T ss_dssp SHHHHHHHHTCCGGGCSEEECSCCSHHHHTTGGGCS-----SSCEEEEHHHHHHHHHCT--------------TSCGG-G
T ss_pred hHHHHHHHcCCCHHHCCEEEcCCChhhcCCChHHCC-----CCEEEECHHHHHHhhccc--------------ccccc-c
Confidence 0 0000 1356677999999999999999999864 579999998876543210 01100 0
Q ss_pred HHHhcccEEecCCcEEEeCCEEEEEEeCCCCcCceEEEEEEC-CEEEEEeecCCCCCc
Q 044504 141 NRSMDKIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIA-GVRVLYTGDYSREED 197 (525)
Q Consensus 141 ~~~~~~~~~i~~~~~~~~~gi~v~~~~~gH~~gs~~~~i~~~-~~~ilytGD~~~~~~ 197 (525)
.........+ .++...++++++.. .+||++|+++++++.. +++++|+||+.....
T Consensus 146 ~~~~~~~~~~-~~~~~~~~~i~~~~-~pGHt~g~~~~~~~~~~~~~vl~~GD~~~~~~ 201 (254)
T 3dha_A 146 ILPHLNYKII-EGDYEVVPGVQLLY-TPGHSPGHQSLFIETEQSGSVLLTIDASYTKE 201 (254)
T ss_dssp SCTTSCEEEE-CSSEEEETTEEEEE-CCSSSTTCEEEEEEETTTEEEEEEETTCSSHH
T ss_pred cCcccceEEe-cCCccccCCEEEEE-CCCCCCCCEEEEEEeCCCCEEEEEecccchhh
Confidence 0000122233 35556678877765 5699999999999986 679999999986543
No 28
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.65 E-value=4.9e-16 Score=151.22 Aligned_cols=152 Identities=18% Similarity=0.246 Sum_probs=105.0
Q ss_pred EEEecCCCccCCcEEEEEECCeEEEEecCCCCCcCccc-cCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCce
Q 044504 26 ITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMA-ALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGR 104 (525)
Q Consensus 26 i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~-~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~ 104 (525)
+.++|.. +.|||+|+.++..+|||||.......+. .+. ..++++.+|++||+||.|.||+||++.|.+.. +.+
T Consensus 17 v~~i~~~---~~n~~li~~~~~~iLID~G~~~~~~~l~~~l~-~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~--~~~ 90 (263)
T 1k07_A 17 LYYVGTD---DLASYLIVTPRGNILINSDLEANVPMIKASIK-KLGFKFSDTKILLISHAHFDHAAGSELIKQQT--KAK 90 (263)
T ss_dssp EEECCBS---SBCCEEEEETTEEEEECCCCGGGHHHHHHHHH-HTTCCGGGEEEEECSSSSHHHHTTHHHHHHHH--CCE
T ss_pred EEEECCC---CeEEEEEEeCCceEEEECCCcccHHHHHHHHH-HcCCCHHHCcEEEeCCCCccccccHHHHHHhc--CCE
Confidence 5566554 4799999999999999999741111111 111 11355678999999999999999999998764 679
Q ss_pred EEecHHHHHHHHHHHHHHHhhhccccCCCCCCHH---HHHHHhcccEEecCCcEEEeCCEEEEEE-eCCCCcCceEEEEE
Q 044504 105 VFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQ---DINRSMDKIEVLDFHQTVEVNGIKFWCY-TAGHVLGAAMFMVD 180 (525)
Q Consensus 105 Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~gi~v~~~-~~gH~~gs~~~~i~ 180 (525)
||+++.+...+...... ...|... .+. .......+..++.+.+++.+++++ .+||++|+++|+++
T Consensus 91 v~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~g~~~i~~i~~pGHt~g~~~~~~~ 159 (263)
T 1k07_A 91 YMVMDEDVSVILSGGKS----------DFHYANDSSTYFT-QSTVDKVLHDGERVELGGTVLTAHLTPGHTRGCTTWTMK 159 (263)
T ss_dssp EEEEHHHHHHHHTTTTT----------CTTTTTCGGGCCC-CCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEE
T ss_pred EEEcHHHHHHHhccccc----------ccccCccccccCC-CCCcceEeCCCCEEEECCeEEEEEECCCCCCCcEEEEEe
Confidence 99999887765431100 0000000 000 012346778899999999989886 47999999999998
Q ss_pred EC--C--EEEEEeecCCC
Q 044504 181 IA--G--VRVLYTGDYSR 194 (525)
Q Consensus 181 ~~--~--~~ilytGD~~~ 194 (525)
.. + .+++|+||+..
T Consensus 160 ~~~~~~~~~~lf~GD~~~ 177 (263)
T 1k07_A 160 LKDHGKQYQAVIIGSIGV 177 (263)
T ss_dssp EEETTEEEEEEEECCCCC
T ss_pred cccCCceeEEEEECCccc
Confidence 64 4 48999999865
No 29
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.63 E-value=2.1e-16 Score=149.81 Aligned_cols=157 Identities=20% Similarity=0.272 Sum_probs=102.4
Q ss_pred CcEEEEEecCCCc---------cCCcEEEEEECCeEEEEecCCCCCcCccc-cCCCCCCCCCCCccEEEcCCCchhHhcC
Q 044504 22 DQLIITPLGAGNE---------VGRSCVYMSYKGKTILFDCGIHPAYSGMA-ALPYFDEIDPSAIDVLLITHFHLDHAAS 91 (525)
Q Consensus 22 ~~m~i~~LG~~~e---------vg~s~~ll~~~~~~iLiD~G~~~~~~~~~-~~~~~~~~~~~~Id~IliTH~H~DH~gg 91 (525)
..|+++|+|..+. .+.|||+|+.++..+|||||.......+. .+. ..++++.+|++||+||.|.||+||
T Consensus 11 ~~~~~~~~~~~g~~~~p~~~~~~~~n~~li~~~~~~iLID~G~~~~~~~l~~~l~-~~g~~~~~i~~ViiTH~H~DH~gg 89 (221)
T 1ztc_A 11 HHMELKILVTGGNVFVPGRLNAHFSTVVYLEHKDRRIIIDPGNLSSMDELEEKFS-ELGISPDDITDVLFTHVHLDHIFN 89 (221)
T ss_dssp CCEEEEEEECCBEEEETTTEECCBCCEEEEEETTEEEEECCCCGGGHHHHHHHHH-HHTCCGGGCCEEECSCCCHHHHGG
T ss_pred cceeEEEEEecceEEecCCCCCCceEEEEEEeCCeEEEEECCCCcchHHHHHHHH-HcCCCHHHCcEEEEcCCccccCCc
Confidence 4689999988873 24699999999999999999631111111 111 113567789999999999999999
Q ss_pred hHHHHhhcCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeCCCC
Q 044504 92 LPYFLEKTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAGHV 171 (525)
Q Consensus 92 lp~l~~~~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~gH~ 171 (525)
++.|. +.+||+++.. ....+..+.. . ....| .........+..++.++.+..+++++... +||+
T Consensus 90 ~~~~~-----~~~v~~~~~~---~~~~~~~~~~----~-~~~~~--~~~~~~~~~~~~~~~g~~l~~~~~~v~~~-pGHt 153 (221)
T 1ztc_A 90 SVLFE-----NATFYVHEVY---KTKNYLSFGT----I-VGRIY--SKVISSWKNVVLLKGEESLFDEKVKVFHT-PWHA 153 (221)
T ss_dssp GGGCT-----TCEEEEEGGG---GGSCGGGGCH----H-HHHHH--HHHHHTCCSEEEECSCCEETTTTEEEEEC-CSSS
T ss_pred hhhCC-----CCEEEEeHHH---hhhhhhhhcc----c-hhhhh--hhccccccceEEeCCCCEEECCeEEEEEc-CCCC
Confidence 99874 5699998761 1100000000 0 00000 00111113456777777664236777664 5999
Q ss_pred cCceEEEEEECC-EEEEEeecCCCC
Q 044504 172 LGAAMFMVDIAG-VRVLYTGDYSRE 195 (525)
Q Consensus 172 ~gs~~~~i~~~~-~~ilytGD~~~~ 195 (525)
+|+++|+++.++ ++++|+||+...
T Consensus 154 ~g~~~~~~~~~~~~~vlftGD~~~~ 178 (221)
T 1ztc_A 154 REHLSFLLDTENAGRVLITGDITPN 178 (221)
T ss_dssp TTCEEEEEEETTTEEEEECGGGSCS
T ss_pred cccEEEEEEcCCCCeEEEEeCcccc
Confidence 999999999877 799999999853
No 30
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.61 E-value=1.1e-14 Score=141.16 Aligned_cols=149 Identities=23% Similarity=0.303 Sum_probs=100.3
Q ss_pred EEEEecCC---CccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCC
Q 044504 25 IITPLGAG---NEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTF 101 (525)
Q Consensus 25 ~i~~LG~~---~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~ 101 (525)
.|+++..+ .....|||+|+.++..+|||||...... .+ ++ +.+|++|++||.|.||+||++.|.+++
T Consensus 5 ~i~~i~~~~~g~~~~~~~~li~~~~~~iLiD~G~~~~~~------~l-~~-~~~i~~vi~TH~H~DH~gg~~~l~~~~-- 74 (261)
T 3adr_A 5 GLHSIPAGPVEFPEIATVYVMCGEKLTVMIDAGVSNSIA------DF-SF-LDKLDYIVLTHLHIDHIGLLPELLQVY-- 74 (261)
T ss_dssp EEEEEECSCTTCGGGSEEEEEECSSCEEEECCCCTTCCC------CC-TT-CSCCCEEECSCCSGGGTTTHHHHHHHS--
T ss_pred CeEEEeccCCCCCCceEEEEEEcCCcEEEEeCCCCCChh------hc-CC-CCCCcEEEECCCCccccCCHHHHHHHh--
Confidence 34444433 3445789999876889999999754211 11 34 678999999999999999999998774
Q ss_pred CceEEecHHHHHHHHH------HHHHHHhhhc----cccCC-CCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEe-CC
Q 044504 102 KGRVFMTHATKAIYKL------LLTDYVKVSK----VSVED-MLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYT-AG 169 (525)
Q Consensus 102 ~~~Iy~t~~t~~~~~~------~l~d~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~-~g 169 (525)
+.+||+++.+.+.+.. ++........ ..... ..+. ...+..++.++.+.+++++++++. +|
T Consensus 75 ~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~g~~~~~g~~~i~~~~~pG 147 (261)
T 3adr_A 75 KAKVLVKSGFKKYLTSEDGLKKLNESAEKVLGDLYYVYGGLEKKLD-------QDKVIEVEGNEEFDLGGYRMRLIYTPG 147 (261)
T ss_dssp CCEEEEETTCTHHHHSHHHHHHHHHHHHHHHTHHHHHHCCCCSCCC-------GGGEEEECSCCEEECSSSEEEEEECTT
T ss_pred CCeEEECHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcccccCCC-------ccceEecCCCCEEEECCEEEEEEECCC
Confidence 6799999887654431 1111000000 00000 0000 023467788999999999998875 68
Q ss_pred CCcCceEEEEEECCEEEEEeecCCC
Q 044504 170 HVLGAAMFMVDIAGVRVLYTGDYSR 194 (525)
Q Consensus 170 H~~gs~~~~i~~~~~~ilytGD~~~ 194 (525)
|++|+++|.+ .+++|+||+..
T Consensus 148 Ht~~~~~~~~----~~~lf~GD~~~ 168 (261)
T 3adr_A 148 HARHHMSVLV----DDFLFTGDSAG 168 (261)
T ss_dssp SCTTCEEEEE----TTEEEEETSSC
T ss_pred CCCccEEEEE----CCEEEEcCccc
Confidence 9999999965 36999999875
No 31
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.61 E-value=3.8e-15 Score=147.70 Aligned_cols=156 Identities=20% Similarity=0.205 Sum_probs=102.7
Q ss_pred EEEecCCCccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceE
Q 044504 26 ITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRV 105 (525)
Q Consensus 26 i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~I 105 (525)
+.++|. .+.||++|+.++..||||||.......+.......++.+.+|++||+||.|.||+||++.|.+++ +.+|
T Consensus 50 ~~~vg~---~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~--~~~v 124 (303)
T 4ax1_B 50 TWYVGT---CGISALLVTSDAGHILVDAATPQAGPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKAT--GAPV 124 (303)
T ss_dssp EEECSB---SSSCCEEECCTTCEEEECCBSTTCHHHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHHH--CCCE
T ss_pred ceEeCC---CCceEEEEEeCCcEEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhhc--CCEE
Confidence 335543 35799999999999999999642211111100111355677999999999999999999998764 6799
Q ss_pred EecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEe-CCCCcCceEEEEEECC-
Q 044504 106 FMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYT-AGHVLGAAMFMVDIAG- 183 (525)
Q Consensus 106 y~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~-~gH~~gs~~~~i~~~~- 183 (525)
|++..+...+..... ......|..............+..++.+.+++.+++++. +||++|+++|++...+
T Consensus 125 ~~~~~~~~~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~pgHt~g~~~~~~~~~~~ 196 (303)
T 4ax1_B 125 YARAPAIDTLKRGLP--------DRTDPNFEVAEPVAPVANIVTLADDGVVSVGPLALTAVASPGHTPGGTSWTWRSCEG 196 (303)
T ss_dssp EEEHHHHHHHHHTSC--------CTTSTTGGGCCCCCCCSCEEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEET
T ss_pred EEcHHHHHHHhcccc--------CccccccccccCcCCCCCcEEeCCCCEEEECCeEEEEEeCCCCCccceEEEEEecCC
Confidence 999988776543210 000111110000001124577889999999999998874 7999999999987531
Q ss_pred --EEEEEeecCCC
Q 044504 184 --VRVLYTGDYSR 194 (525)
Q Consensus 184 --~~ilytGD~~~ 194 (525)
...+++||...
T Consensus 197 ~~~~~~l~gD~l~ 209 (303)
T 4ax1_B 197 DDCRQMVYADSLT 209 (303)
T ss_dssp TEEEEEEECCCCC
T ss_pred CceeEEEEeCCcc
Confidence 22355588864
No 32
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.61 E-value=3.2e-16 Score=148.05 Aligned_cols=132 Identities=18% Similarity=0.220 Sum_probs=97.6
Q ss_pred ccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHH
Q 044504 34 EVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKA 113 (525)
Q Consensus 34 evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~ 113 (525)
..+.||++|+.++..+|||||..... ....+..+......+|++|++||.|.||+||++.|.+ ++.+||+++.+.+
T Consensus 28 ~~~~n~~li~~~~~~iLiD~G~~~~~-~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~---~~~~v~~~~~~~~ 103 (219)
T 3l6n_A 28 EYSANSMYLVTKKGVVLFDVPWEKVQ-YQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNN---KGIKTYATAKTNE 103 (219)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSGGG-HHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHH---TTCEEEECHHHHH
T ss_pred cccceEEEEEeCCEEEEEeCCCChHH-HHHHHHHHHHhcCCceeEEEecCCCcccccCHHHHHh---CCCEEEEcHHHHH
Confidence 34579999999999999999964311 0001111111113679999999999999999999875 3789999998876
Q ss_pred HHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEe--CCCCcCceEEEEEECCEEEEEeec
Q 044504 114 IYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYT--AGHVLGAAMFMVDIAGVRVLYTGD 191 (525)
Q Consensus 114 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~--~gH~~gs~~~~i~~~~~~ilytGD 191 (525)
.+... . .......+..++.+.+++.+++++. +||++|++++++. +.+++|+||
T Consensus 104 ~~~~~--------~---------------~~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~g~~~~~~~--~~~~lf~GD 158 (219)
T 3l6n_A 104 FLKKD--------G---------------KATSTEIIKTGKPYRIGGEEFVVDFLGEGHTADNVVVWFP--KYNVLDGGC 158 (219)
T ss_dssp HHHHT--------T---------------CCCCSEECCTTSEEEETTEEEEEECCCCSSSSSCCEEEET--TTTEEEEET
T ss_pred HHHhc--------C---------------CCCCcEecCCCCEEEECCEEEEEEeCCCCCCCCCEEEEEC--CCCEEEECC
Confidence 54321 0 0123567788999999999999974 7999999999884 567999999
Q ss_pred CCC
Q 044504 192 YSR 194 (525)
Q Consensus 192 ~~~ 194 (525)
+..
T Consensus 159 ~~~ 161 (219)
T 3l6n_A 159 LVK 161 (219)
T ss_dssp TSC
T ss_pred eee
Confidence 874
No 33
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.60 E-value=6.6e-16 Score=144.93 Aligned_cols=151 Identities=16% Similarity=0.174 Sum_probs=99.4
Q ss_pred EEEEecCCCccCCcEEEEEE--CCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCC
Q 044504 25 IITPLGAGNEVGRSCVYMSY--KGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFK 102 (525)
Q Consensus 25 ~i~~LG~~~evg~s~~ll~~--~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~ 102 (525)
+|+.+-.+ ..+.|||+|+. ++..+|||||... ..+. ..+.... .+|++|++||.|.||+||++.|.+.+ +
T Consensus 2 ~i~~~~~~-~~~~n~~li~~~~~~~~iLiD~G~~~--~~l~--~~l~~~g-~~i~~ii~TH~H~DH~gg~~~l~~~~--~ 73 (210)
T 2xf4_A 2 NYRIIPVT-AFSQNCSLIWCEQTRLAALVDPGGDA--EKIK--QEVDASG-VTLMQILLTHGHLDHVGAASELAQHY--G 73 (210)
T ss_dssp EEEEEEET-TTTEEEEEEECTTTCEEEEECCCSCH--HHHH--HHHHHHT-CEEEEEECSCSCHHHHTTHHHHHHHH--T
T ss_pred eEEEEeeC-CcccEEEEEEecCCCcEEEEcCCCCH--HHHH--HHHHHcC-CceeEEEECCCChhhhcCHHHHHHHc--C
Confidence 44444332 24589999984 6789999999421 1110 1111111 24899999999999999999998764 5
Q ss_pred ceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEE-eCCCCcCceEEEEEE
Q 044504 103 GRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCY-TAGHVLGAAMFMVDI 181 (525)
Q Consensus 103 ~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~-~~gH~~gs~~~~i~~ 181 (525)
.+||+++.+.+.+...+.......+... .. .......+..++.+.+++.+++++ .+||++|++++++
T Consensus 74 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~g~~~~~~-- 141 (210)
T 2xf4_A 74 VPVIGPEKEDEFWLQGLPAQSRMFGLDE-CQ---------PLTPDRWLNDGDRVSVGNVTLQVLHCPGHTPGHVVFFD-- 141 (210)
T ss_dssp CCEECCCGGGHHHHHTHHHHHHHTTCCC-CC---------CCCCSBCCCTTCEEEETTEEEEEEECCSSSTTCEEEEE--
T ss_pred CcEEEecchHHHHhccchhhhhhcCCcc-cC---------CCCCceEECCCCEEEECCeEEEEEECCCCCCCcEEEEe--
Confidence 7999998887665433222111111000 00 001234567888999999999886 5799999999987
Q ss_pred CCEEEEEeecCCCC
Q 044504 182 AGVRVLYTGDYSRE 195 (525)
Q Consensus 182 ~~~~ilytGD~~~~ 195 (525)
++.+++|+||+...
T Consensus 142 ~~~~~lf~GD~~~~ 155 (210)
T 2xf4_A 142 EQSQLLISGDVIFK 155 (210)
T ss_dssp TTTTEEEEETSEET
T ss_pred CCCCEEEECCEecc
Confidence 46789999999753
No 34
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.59 E-value=1.6e-15 Score=152.60 Aligned_cols=154 Identities=20% Similarity=0.240 Sum_probs=96.3
Q ss_pred CcEEEEEECCeEEEEecCCCCCc----CccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHH
Q 044504 37 RSCVYMSYKGKTILFDCGIHPAY----SGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATK 112 (525)
Q Consensus 37 ~s~~ll~~~~~~iLiD~G~~~~~----~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~ 112 (525)
.|||+|+.++..||||||....+ ..+.......++++++||+|++||.|.||+||+..+......+.+||+++.+.
T Consensus 97 ~n~~LI~~~~~~iLIDtG~~~~~~~~~~~l~~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~~~~~~fp~a~v~~~~~~~ 176 (331)
T 1p9e_A 97 VTGYLVNTGSKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGEQLAFPNAVVRADQKEA 176 (331)
T ss_dssp EEEEEEECSSCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETTEESSTTCEEECBHHHH
T ss_pred EEEEEEEECCEEEEEECCCCCcCCcchhHHHHHHHHcCCCHHHCCEEEeCCcccccCCcccccccccCCCCEEEECHHHH
Confidence 46999999999999999976321 11110001124677899999999999999999985322221267999999887
Q ss_pred HHHHHHHHHHHhhhcccc-CC-CCCC--HHHHHHH--hcccEEecCCcEEEeCCEEEEEEeCCCCcCceEEEEEECCEEE
Q 044504 113 AIYKLLLTDYVKVSKVSV-ED-MLFD--EQDINRS--MDKIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRV 186 (525)
Q Consensus 113 ~~~~~~l~d~~~~~~~~~-~~-~~~~--~~~~~~~--~~~~~~i~~~~~~~~~gi~v~~~~~gH~~gs~~~~i~~~~~~i 186 (525)
+.+..... ...... .. ..+. .+.+... ..++..++.++++. .|+++.. .+||++|+++|+++.++.++
T Consensus 177 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~-~gi~vi~-tpGHtpG~~~~~i~~~~~~v 250 (331)
T 1p9e_A 177 DFWLSQTN----LDKAPDDESKGFFKGAMASLNPYVKAGKFKPFSGNTDLV-PGIKALA-SHGHTPGHTTYVVESQGQKL 250 (331)
T ss_dssp HHHSCHHH----HTTCSSTTSCHHHHHHHHHHHHHHHTTCBCCBCSSEECS-TTEEEEE-CTTSSTTCEEEEEEETTEEE
T ss_pred HHHhCchh----hccCchhhhhHHHHHHHHHhhhhcccCceEEeCCCCEEc-ccEEEEE-cCCCChhCEEEEEEECCcEE
Confidence 65432110 000000 00 0010 0111111 23445566665543 3566654 47999999999999989999
Q ss_pred EEeecCCCCC
Q 044504 187 LYTGDYSREE 196 (525)
Q Consensus 187 lytGD~~~~~ 196 (525)
+|+||+.+..
T Consensus 251 lf~GD~~~~~ 260 (331)
T 1p9e_A 251 ALLGDLILVA 260 (331)
T ss_dssp EECTTSCCCH
T ss_pred EEEECccCcc
Confidence 9999998754
No 35
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.59 E-value=5.5e-15 Score=158.97 Aligned_cols=181 Identities=15% Similarity=0.215 Sum_probs=113.1
Q ss_pred CCcEEEEEecCCCccCCcEEEEEECCeEEEEecCCCCCcCc---------------------cccCCCCCCCCCCCccEE
Q 044504 21 GDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSG---------------------MAALPYFDEIDPSAIDVL 79 (525)
Q Consensus 21 ~~~m~i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~~---------------------~~~~~~~~~~~~~~Id~I 79 (525)
.+.++|++|..+.. .++|++|+.++..||||||....+.. ...++.+......+||+|
T Consensus 3 ~~~~~I~~ldvG~g-qg~~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~id~v 81 (547)
T 2bib_A 3 SSGNKIHFINVQEG-GSDAIILESNGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFI 81 (547)
T ss_dssp CSCEEEEEECBSSS-BCCEEEEEETTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCE
T ss_pred CcCceEEEEEcCCC-CceEEEEEeCCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCcccccEE
Confidence 46789999987631 36899999999999999997532110 001122222345679999
Q ss_pred EcCCCchhHhcChHHHHhhcCCCceEEecHHHHHHHHHH------HHHHHhhhccccCCCCCCHHHHHHHhcccE--Eec
Q 044504 80 LITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLL------LTDYVKVSKVSVEDMLFDEQDINRSMDKIE--VLD 151 (525)
Q Consensus 80 liTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~~~~~------l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~ 151 (525)
||||.|.||+||++.|.+.++ ..+||+++.+...+... +..+..+. ..+...-..+. .+.
T Consensus 82 ilTH~H~DHiggl~~l~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~g~~~~~~~~~ 149 (547)
T 2bib_A 82 LVTHTHSDHIGNVDELLSTYP-VDRVYLKKYSDSRITNSERLWDNLYGYDKVL-----------QTATETGVSVIQNITQ 149 (547)
T ss_dssp ECCCSCHHHHTTHHHHHHHSC-BSEEECCCCCGGGBSCGGGCTTHHHHHHHHH-----------HHHHHTTCEEECSCCT
T ss_pred EEcCCCccccCCHHHHHHhCC-ccEEEECcccccccCChHHHHhHHHHHHHHH-----------HHHHHhCCeEEEeecC
Confidence 999999999999999988753 23688876543321000 00000000 00000000111 245
Q ss_pred CCcEEEeCCEEEEEEeC---CC-----------CcCceEEEEEECCEEEEEeecCCCCCcccCccCCCCCCCCcEEEE
Q 044504 152 FHQTVEVNGIKFWCYTA---GH-----------VLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICII 215 (525)
Q Consensus 152 ~~~~~~~~gi~v~~~~~---gH-----------~~gs~~~~i~~~~~~ilytGD~~~~~~~~~~~~~~~~~~~D~LI~ 215 (525)
.++.+.+++++|+++++ .| ..+|+++.|+.++.+++|+||+....+........ ..++|+|++
T Consensus 150 ~g~~~~~g~~~i~~l~~~~~~h~~~~~~~~~~~n~~S~vl~i~~~~~~iLftGD~~~~~~~e~~l~~~-~~~~DvLkv 226 (547)
T 2bib_A 150 GDAHFQFGDMDIQLYNYENETDSSGELKKIWDDNSNSLISVVKVNGKKIYLGGDLDNVHGAEDKYGPL-IGKVDLMKF 226 (547)
T ss_dssp TTTEEEETTEEEEEESCSCCBCTTSCBCCBSSGGGGCCEEEEEETTEEEEECTTCCSTTSHHHHHHHH-HCCCSEEEC
T ss_pred CCceEecCCeeEEEecCccccCccccccccCCCCCCcEEEEEEECCEEEEecCCccchhhhhhhhccc-ccceeEEEe
Confidence 67789999999999863 23 25789999999999999999998753211110110 237899986
No 36
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.58 E-value=5.9e-15 Score=146.32 Aligned_cols=160 Identities=15% Similarity=0.200 Sum_probs=107.4
Q ss_pred CcEEEEEecCCCccCCcEEEEEE--CCeEEEEecCCCCCcC-------cccc-CCCCCCCCCCCccEEEcCCCchhHhcC
Q 044504 22 DQLIITPLGAGNEVGRSCVYMSY--KGKTILFDCGIHPAYS-------GMAA-LPYFDEIDPSAIDVLLITHFHLDHAAS 91 (525)
Q Consensus 22 ~~m~i~~LG~~~evg~s~~ll~~--~~~~iLiD~G~~~~~~-------~~~~-~~~~~~~~~~~Id~IliTH~H~DH~gg 91 (525)
++|+|..+-.+ ..+.+||+|.. ++..+|||||...... .... ...+... ..+|++||+||.|.||++|
T Consensus 3 g~m~i~~~~~~-~~~~~~yli~~~~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~-g~~i~~Il~TH~H~DH~gg 80 (298)
T 4efz_A 3 GSMTVEGFFDP-ATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAAL-GARVRWLLETHVHADHLSA 80 (298)
T ss_dssp CSCEEEEEECT-TTCBEEEEEECTTTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHH-TCEEEEEECSSCCSSSBCC
T ss_pred CceEEEEEecC-CcccEEEEEEECCCCeEEEEcCCCCccccccccCcccHHHHHHHHHHC-CCcceEEEECCCchhhhhh
Confidence 56777766443 33679999987 5779999999641100 0000 0111111 1248999999999999999
Q ss_pred hHHHHhhcCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEE-eCCC
Q 044504 92 LPYFLEKTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCY-TAGH 170 (525)
Q Consensus 92 lp~l~~~~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~-~~gH 170 (525)
++.|.+++ +++||+++.+.++....... .. .. ..|.... ......+..++.+.+++.+++++ .+||
T Consensus 81 ~~~l~~~~--~a~i~~~~~~~~~~~~~~~~-~~---~~---~~~~~~~----~~~~~~~~~g~~l~~g~~~i~vi~tPGH 147 (298)
T 4efz_A 81 APYLKTRV--GGEIAIGRHVTRVQDVFGKL-FN---AG---PAFAHDG----SQFDRLLDDGDTLALGALSIRAMHTPGH 147 (298)
T ss_dssp HHHHHHHH--CCEEEEETTHHHHHHHHHHH-TT---CC---TTSCSSS----TTSSEEECTTCEEEETTEEEEEEECCSS
T ss_pred HHHHHHHh--CCcEEEChhHHHHHHHHHHh-cC---Cc---ccccccc----cCCCEEeCCCCEEEECCEEEEEEECCCC
Confidence 99998875 67999999877765433211 11 10 0010000 01236788899999999999886 4799
Q ss_pred CcCceEEEEEECCEE------EEEeecCCCCC
Q 044504 171 VLGAAMFMVDIAGVR------VLYTGDYSREE 196 (525)
Q Consensus 171 ~~gs~~~~i~~~~~~------ilytGD~~~~~ 196 (525)
++|+++|++...+++ ++|+||+.+..
T Consensus 148 T~g~~~~~~~~~~~~~~~~~~~lftGD~l~~~ 179 (298)
T 4efz_A 148 TPACMTYVVTEAHAAHDARDAAAFVGDTLFMP 179 (298)
T ss_dssp STTCEEEEEEETTCCGGGCBCEEECCSSBCCT
T ss_pred CcccEEEEECCCcccccCCceEEEEcCccccC
Confidence 999999999887655 99999997643
No 37
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.58 E-value=3.8e-15 Score=141.92 Aligned_cols=158 Identities=13% Similarity=0.178 Sum_probs=97.8
Q ss_pred EEEecCCCccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceE
Q 044504 26 ITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRV 105 (525)
Q Consensus 26 i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~I 105 (525)
+..++++...+.||++|+.++..+|||||..+... ......+..+.+.+|++|++||.|.||+||++.|. + .+.+|
T Consensus 15 v~~i~~~~~~~~n~~li~~~~~~iLiD~G~~~~~~-~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~-~--~~~~v 90 (233)
T 3q6v_A 15 LYIVEDKEYVQENSMVYIGTDGITIIGATWTPETA-ETLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWK-T--LGAKI 90 (233)
T ss_dssp EEEEEECSSSCEEEEEEECSSCEEEESCCSSHHHH-HHHHHHHHHHCCCCEEEEECSSSSHHHHTTHHHHH-H--TTCEE
T ss_pred EEEEeCCCcCCCcEEEEEeCCeEEEEECCCCHHHH-HHHHHHHHHhcCCCcEEEEECCCChhhhChHHHHh-h--CCCEE
Confidence 34444444457899999999999999999753110 00001111234678999999999999999999987 3 36899
Q ss_pred EecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeCCCCcCceEEEEEECCEE
Q 044504 106 FMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVR 185 (525)
Q Consensus 106 y~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~gH~~gs~~~~i~~~~~~ 185 (525)
|+++.+.+.+................ .+.. . ........++.+..+..+++++....+||++|++++++ ++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~-~~~~~~~~~~~~~~l~~~~~~v~~~~pGHt~g~~~~~~--~~~~ 163 (233)
T 3q6v_A 91 VATQMTYDLQKSQWGSIVNFTRQGNN--KYPN--L-EKSLPDTVFPGDFNLQNGSIRAMYLGEAHTKDGIFVYF--PAER 163 (233)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHHST--TCCC--C-CCCCCSEEESSCEEETTTTEEEECCCCSSSSSCCEEEE--TTTT
T ss_pred EEcHHHHHHHHhhhHHHHHHHhcccc--cccc--c-cccCCCEEeCCCeEEcCceEEEEECCCCCCcCcEEEEe--ccCC
Confidence 99999988776543322211100000 0000 0 00011233444444433557766656999999999887 4556
Q ss_pred EEEeecCCCC
Q 044504 186 VLYTGDYSRE 195 (525)
Q Consensus 186 ilytGD~~~~ 195 (525)
++| ||....
T Consensus 164 ~lf-gD~~~~ 172 (233)
T 3q6v_A 164 VLY-GNCILK 172 (233)
T ss_dssp EEE-CTTTSC
T ss_pred EEE-Cceecc
Confidence 999 998653
No 38
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.57 E-value=2e-15 Score=141.38 Aligned_cols=148 Identities=16% Similarity=0.201 Sum_probs=97.3
Q ss_pred EEEEEecCCCccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCc
Q 044504 24 LIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKG 103 (525)
Q Consensus 24 m~i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~ 103 (525)
|+|+.+..+ ..+.|||+|+.++..+|||||... ..+. ..+.... .+|++|++||.|.||+||++.|.+.+ +.
T Consensus 1 M~i~~~~~g-~~~~n~~li~~~~~~iliD~G~~~--~~l~--~~l~~~g-~~i~~vilTH~H~DH~gg~~~l~~~~--~~ 72 (207)
T 2zwr_A 1 MRVFPVTLG-PLQENAYLVETGEGPVLIDPGDEP--EKLL--ALFQTTG-LIPLAILLTHAHFDHVGAVAPLVEAL--DL 72 (207)
T ss_dssp CEEEEEEET-TTTEEEEEEEETTEEEEECCCSCH--HHHH--HHHHHHT-CCCSCEECSCCCGGGTTTHHHHHHHH--CC
T ss_pred CeEEEEecC-CcccEEEEEEeCCcEEEEeCCCCH--HHHH--HHHHHcC-CcccEEEECCCChHHHccHHHHHHHh--CC
Confidence 566777654 357899999999999999999521 1110 0111111 24899999999999999999998764 67
Q ss_pred eEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeCCCCcCceEEEEEECC
Q 044504 104 RVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAG 183 (525)
Q Consensus 104 ~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~gH~~gs~~~~i~~~~ 183 (525)
+||+++.+.+.+....... ...+.. ...+ ......+..++.+. ++++.. .+||++|+++++++ +
T Consensus 73 ~v~~~~~~~~~~~~~~~~~-~~~g~~--~~~~--------~~~~~~~~~g~~i~--~~~~~~-~pGHt~g~~~~~~~--~ 136 (207)
T 2zwr_A 73 PVYLHPLDLPLYEGADLAA-RAWGLA--IPKP--------PLPVRPLEEGMRLF--GFQVLH-LPGHSPGHVAFYDP--E 136 (207)
T ss_dssp CEEECGGGHHHHHTHHHHH-HHTTCC--CCCC--------CSCCEECCTTCEET--TEEEEE-CCSSSTTCEEEEET--T
T ss_pred cEEECHHHHHHHhCchhhh-hhcCCC--CCcC--------CCCceEeCCCCEEE--EEEEEe-CCCCCCCcEEEEEC--C
Confidence 9999999987765432211 000000 0000 00234566666654 555543 57999999999984 6
Q ss_pred EEEEEeecCCCC
Q 044504 184 VRVLYTGDYSRE 195 (525)
Q Consensus 184 ~~ilytGD~~~~ 195 (525)
.+++|+||+...
T Consensus 137 ~~~lf~GD~~~~ 148 (207)
T 2zwr_A 137 GAQVFSGDLLFR 148 (207)
T ss_dssp TTEEEEETSEET
T ss_pred CCEEEEecccCC
Confidence 789999999753
No 39
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.57 E-value=2.4e-14 Score=143.02 Aligned_cols=155 Identities=18% Similarity=0.155 Sum_probs=100.6
Q ss_pred CCcEEEEEECCeEEEEecCCCCCc--CccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHH
Q 044504 36 GRSCVYMSYKGKTILFDCGIHPAY--SGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKA 113 (525)
Q Consensus 36 g~s~~ll~~~~~~iLiD~G~~~~~--~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~ 113 (525)
+.|||+|+.++..+|||||..... ..+.......++++.+|++|++||.|.||+||++.|.++ +++||+++.+..
T Consensus 21 ~~n~~li~~~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~~---~~~v~~~~~~~~ 97 (317)
T 2zo4_A 21 TVNLYLLQGAGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGL---GARVFLHEEEFA 97 (317)
T ss_dssp EEEEEEEEETTEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHHT---TCEEEEEGGGTT
T ss_pred cEEEEEEEcCCceEEEECCCCCHHHHHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHhC---CCEEEEcHHHHH
Confidence 479999999999999999975310 001100001135567899999999999999999998765 579999998876
Q ss_pred HHHHHHH----------HHHhhhccccC--CCCCCHHH-HH---HHhcccEEecCCcEEEeCCEEEEEEe-CCCCcCceE
Q 044504 114 IYKLLLT----------DYVKVSKVSVE--DMLFDEQD-IN---RSMDKIEVLDFHQTVEVNGIKFWCYT-AGHVLGAAM 176 (525)
Q Consensus 114 ~~~~~l~----------d~~~~~~~~~~--~~~~~~~~-~~---~~~~~~~~i~~~~~~~~~gi~v~~~~-~gH~~gs~~ 176 (525)
.+..... ......+.... ..+-.... .. ........+..++.+.++|.+++++. +||++|+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~gg~~~~~i~tpGHt~g~~~ 177 (317)
T 2zo4_A 98 RGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVAGKRLRVLWTPGHADGHAA 177 (317)
T ss_dssp THHHHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCCCCSSCEEECTTCEEEETTEEEEEEECCSSSTTCEE
T ss_pred HHHhhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCCCCCCceEECCCCEEEeCCceEEEEECCCCCcccEE
Confidence 6543221 00000000000 00000000 00 00124567888999999999998875 699999999
Q ss_pred EEEEECCEEEEEeecCCCC
Q 044504 177 FMVDIAGVRVLYTGDYSRE 195 (525)
Q Consensus 177 ~~i~~~~~~ilytGD~~~~ 195 (525)
|++ ++.+++|+||....
T Consensus 178 ~~~--~~~~~lf~GD~~~~ 194 (317)
T 2zo4_A 178 FYL--EEEGVLLAGDALLE 194 (317)
T ss_dssp EEE--TTTTEEEEETSCCS
T ss_pred EEe--CCCCEEEECCEecC
Confidence 976 56779999999753
No 40
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.57 E-value=1.3e-15 Score=148.99 Aligned_cols=162 Identities=19% Similarity=0.279 Sum_probs=100.3
Q ss_pred cEEEEEecCCC------------------ccCCcEEEEEECCeEEEEecCCCCCc---------------CccccCCCCC
Q 044504 23 QLIITPLGAGN------------------EVGRSCVYMSYKGKTILFDCGIHPAY---------------SGMAALPYFD 69 (525)
Q Consensus 23 ~m~i~~LG~~~------------------evg~s~~ll~~~~~~iLiD~G~~~~~---------------~~~~~~~~~~ 69 (525)
.|+|++|++|. ..+.|||+|+.++..+|||||..... ..+.......
T Consensus 3 ~~~i~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 82 (274)
T 3aj3_A 3 DTKVYLLDGGSLVLDGYHVFWNRGPGGEVRFPVYSILIEHAEGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGLL 82 (274)
T ss_dssp CCEEEEEEEEEEEEEHHHHTTTTCCCSEEEEEEEEEEEEETTEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHHT
T ss_pred ccEEEEEcCceEEechHheecCCCCCcEEEeeEEEEEEEeCCccEEEECCCCcccccCccccCCcccCccccHHHHHHHc
Confidence 47788887654 23459999999999999999975321 0000000011
Q ss_pred CCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHH---HHH----
Q 044504 70 EIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQD---INR---- 142 (525)
Q Consensus 70 ~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~---~~~---- 142 (525)
++++.+|++||+||.|.||+||++.| .+.+||+++.+.+.+...... .........+.... ...
T Consensus 83 g~~~~~i~~VilTH~H~DH~gg~~~~-----~~a~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 153 (274)
T 3aj3_A 83 GLEPRDIDVVVNSHFHFDHCGGNKYF-----PHAKKICHRSEVPQACNPQPF----EHLGYSDLSFSAEAAEARGATAQL 153 (274)
T ss_dssp TCCGGGCCEEECSCCSGGGTTTGGGC-----TTSEEEEETTHHHHHHSCCGG----GTTTTCCCTTCHHHHHHHTCGGGC
T ss_pred CCCHHHCCEEEecCcCcccCCchhhC-----CCCEEEECHHHHHHHhCcCCc----cccccChhhhcccccccccccccc
Confidence 45677899999999999999999987 267999998877654321100 00000000010000 000
Q ss_pred ------HhcccEEecCCcEEEeCC-EEEEEEeCCCCcCceEEEEEEC-CEEEEEeecCCCCC
Q 044504 143 ------SMDKIEVLDFHQTVEVNG-IKFWCYTAGHVLGAAMFMVDIA-GVRVLYTGDYSREE 196 (525)
Q Consensus 143 ------~~~~~~~i~~~~~~~~~g-i~v~~~~~gH~~gs~~~~i~~~-~~~ilytGD~~~~~ 196 (525)
....+..++ +.++++| +++.. .+||++|+++++++.+ +.+++|+||+....
T Consensus 154 ~~~~~~~~~~~~~~~--~~~~l~g~~~v~~-~pGHt~g~~~~~~~~~~~~~~lf~GD~~~~~ 212 (274)
T 3aj3_A 154 LEGTTRANSTFEGID--GDVDLARGVKLIS-TPGHSIGHYSLLVEFPRRKPILFTIDAAYTQ 212 (274)
T ss_dssp CTTCCSTTSCEEEEC--SSEEEETTEEEEE-CTTSSTTCEEEEECCSSSCCEEEEETTCSSH
T ss_pred ccccccCCCCceEcC--CccccCCEEEEEE-CCCCCceeeEEEEECCCCCEEEEEechhhhH
Confidence 011334444 3466677 66654 4699999999999866 57899999987644
No 41
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.55 E-value=2.2e-15 Score=142.81 Aligned_cols=131 Identities=18% Similarity=0.221 Sum_probs=95.3
Q ss_pred cCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHHH
Q 044504 35 VGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAI 114 (525)
Q Consensus 35 vg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~ 114 (525)
.+.|||+|+.++..+|||||...... ......+......+|++|++||.|.||+||++.+.+ .+.+||+++.+.+.
T Consensus 25 ~~~n~~li~~~~~~iLiD~G~~~~~~-~~~~~~l~~~~g~~i~~vi~TH~H~DH~gg~~~~~~---~~~~v~~~~~~~~~ 100 (223)
T 1m2x_A 25 YAANAVYLVTDKGVVVIDCPWGEDKF-KSFTDEIYKKHGKKVIMNIATHSHDDRAGGLEYFGK---IGAKTYSTKMTDSI 100 (223)
T ss_dssp EEEEEEEEEETTEEEEESCCSSGGGH-HHHHHHHHHHHCCCEEEEECSSSSTTTTTTHHHHHH---TTCEEEEEHHHHHH
T ss_pred ccccEEEEEeCCEEEEEeCCCChhHH-HHHHHHHHHHhCCCeEEEEeccCCccccCchhhHhh---CCCeEEEcHHHHHH
Confidence 45799999999999999999742110 001111111102479999999999999999999876 36799999988765
Q ss_pred HHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEE--eCCCCcCceEEEEEECCEEEEEeecC
Q 044504 115 YKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCY--TAGHVLGAAMFMVDIAGVRVLYTGDY 192 (525)
Q Consensus 115 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~--~~gH~~gs~~~~i~~~~~~ilytGD~ 192 (525)
+.... .. .....+..++.+.+++.+++++ .+||++|++++++ ++.+++|+||+
T Consensus 101 ~~~~~--------~~---------------~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~~~~~~~~--~~~~~lf~GD~ 155 (223)
T 1m2x_A 101 LAKEN--------KP---------------RAQYTFDNNKSFKVGKSEFQVYYPGKGHTADNVVVWF--PKEKVLVGGCI 155 (223)
T ss_dssp HHHTT--------CC---------------CCSEEESSCEEEEETTEEEEEECCCSSSSSSCCEEEE--TTTTEEEEETT
T ss_pred HHhcC--------cc---------------CCceecCCCceEEECCEEEEEEecCCCCCCCCEEEEE--CCCCEEEEecc
Confidence 43210 00 1235677888999999999997 5899999999987 45679999997
Q ss_pred CC
Q 044504 193 SR 194 (525)
Q Consensus 193 ~~ 194 (525)
..
T Consensus 156 ~~ 157 (223)
T 1m2x_A 156 IK 157 (223)
T ss_dssp SC
T ss_pred cc
Confidence 64
No 42
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.55 E-value=1.2e-14 Score=141.87 Aligned_cols=146 Identities=17% Similarity=0.234 Sum_probs=96.7
Q ss_pred CCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHHHH
Q 044504 36 GRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIY 115 (525)
Q Consensus 36 g~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~~ 115 (525)
+.||++|+.++..+|||||.......+.......++++.+|++||+||.|.||+||++.|.+.+ +.+||++..+...+
T Consensus 37 ~~~~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~--~~~v~~~~~~~~~l 114 (269)
T 1sml_A 37 DLTALLVQTPDGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRT--GAKVAANAESAVLL 114 (269)
T ss_dssp TBCCEEEEETTEEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHS--SCEEEECHHHHHHH
T ss_pred CcEEEEEEeCCceEEEECCCCccHHHHHHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHhc--CCeEEECHHHHHHH
Confidence 4689999999999999999642111111000111355678999999999999999999998764 67999999887654
Q ss_pred HHHHHHHHhhhccccCCCCCCHH-HHHHHhcccEEecCCcEEEeCCEEEEEEe-CCCCcCceEEEEEE--CCE-EEEEee
Q 044504 116 KLLLTDYVKVSKVSVEDMLFDEQ-DINRSMDKIEVLDFHQTVEVNGIKFWCYT-AGHVLGAAMFMVDI--AGV-RVLYTG 190 (525)
Q Consensus 116 ~~~l~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~gi~v~~~~-~gH~~gs~~~~i~~--~~~-~ilytG 190 (525)
..... ....|... .. ........+..++.+.+++++++++. +||++|+++|+++. ++. ..+++|
T Consensus 115 ~~~~~----------~~~~~~~~~~~-~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~g~~~~~~~~~~~~~~~~l~~g 183 (269)
T 1sml_A 115 ARGGS----------DDLHFGDGITY-PPANADRIVMDGEVITVGGIVFTAHFMAGHTPGSTAWTWTDTRNGKPVRIAYA 183 (269)
T ss_dssp HTTTC----------SBTTTBTSSCC-CCCCCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEEC
T ss_pred hcCCc----------cccccccccCC-CCCCCCeEeCCCCEEEECCEEEEEEECCCCCcccEEEEEecccCCceeEEEEe
Confidence 32110 00000000 00 00012356778899999999998864 68999999999875 233 355558
Q ss_pred cCCC
Q 044504 191 DYSR 194 (525)
Q Consensus 191 D~~~ 194 (525)
|...
T Consensus 184 D~l~ 187 (269)
T 1sml_A 184 DSLS 187 (269)
T ss_dssp CCCC
T ss_pred cccc
Confidence 9864
No 43
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.55 E-value=4.3e-15 Score=144.05 Aligned_cols=132 Identities=20% Similarity=0.295 Sum_probs=95.9
Q ss_pred CCCcEEEEEecCCCccCCcEEEEEE-CCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhh
Q 044504 20 EGDQLIITPLGAGNEVGRSCVYMSY-KGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEK 98 (525)
Q Consensus 20 ~~~~m~i~~LG~~~evg~s~~ll~~-~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~ 98 (525)
+.+.|+|+.++..+ +.+||+|.. ++..+|||||... .....+.... .+|++|++||.|.||+||++.|.+.
T Consensus 4 d~g~m~i~~i~~~~--~n~~yli~~~~~~~vlID~G~~~-----~i~~~l~~~g-~~i~~Il~TH~H~DH~gg~~~l~~~ 75 (258)
T 2qed_A 4 DIGSMNLNSIPAFQ--DNYIWVLTNDEGRCVIVDPGEAA-----PVLKAIAEHK-WMPEAIFLTHHHHDHVGGVKELLQH 75 (258)
T ss_dssp ---CCEEEEEEETT--TEEEEEEECTTSEEEEECCSCHH-----HHHHHHHHHT-CEEEEEECCSCCHHHHTTHHHHHHH
T ss_pred ccCccEEEEecccC--ceEEEEEEECCCcEEEEeCCCcH-----HHHHHHHHcC-CCCCEEEeCCCCccccCCHHHHHHH
Confidence 34568899987555 456999988 6789999999421 1111111111 2689999999999999999999877
Q ss_pred cCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEe-CCCCcCceEE
Q 044504 99 TTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYT-AGHVLGAAMF 177 (525)
Q Consensus 99 ~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~-~gH~~gs~~~ 177 (525)
++ ..+||++..+. .. .....+..++.+.+++.+++++. +||++|+++|
T Consensus 76 ~~-~~~v~~~~~~~------------~~------------------~~~~~~~~g~~~~~g~~~~~vi~tPGHt~g~~~~ 124 (258)
T 2qed_A 76 FP-QMTVYGPAETQ------------DK------------------GATHLVGDGDTIRVLGEKFTLFATPGHTLGHVCY 124 (258)
T ss_dssp CT-TCEEEECGGGG------------GG------------------TCSEECCTTCEEEETTEEEEEEECCSSSTTCEEE
T ss_pred CC-CCEEEeccccc------------CC------------------CCcEEeCCCCEEEECCcEEEEEECCCCCCCCeEE
Confidence 53 37999987542 00 13456788899999999998864 6999999999
Q ss_pred EEEECCEEEEEeecCCC
Q 044504 178 MVDIAGVRVLYTGDYSR 194 (525)
Q Consensus 178 ~i~~~~~~ilytGD~~~ 194 (525)
+ +.+++|+||+.+
T Consensus 125 ~----~~~~lftGD~l~ 137 (258)
T 2qed_A 125 F----SRPYLFCGDTLF 137 (258)
T ss_dssp E----ETTEEEEETTEE
T ss_pred E----cCCEEEECCCCC
Confidence 8 346999999874
No 44
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.55 E-value=1.1e-14 Score=144.99 Aligned_cols=142 Identities=13% Similarity=0.103 Sum_probs=101.4
Q ss_pred CCcEEEEEecCCCccCCcEEEEEE--CCeEEEEecCCCCCcCccccCC-CCCCCC----CCCccEEEcCCCchhHhcChH
Q 044504 21 GDQLIITPLGAGNEVGRSCVYMSY--KGKTILFDCGIHPAYSGMAALP-YFDEID----PSAIDVLLITHFHLDHAASLP 93 (525)
Q Consensus 21 ~~~m~i~~LG~~~evg~s~~ll~~--~~~~iLiD~G~~~~~~~~~~~~-~~~~~~----~~~Id~IliTH~H~DH~gglp 93 (525)
+..|+|..+...+ +.+||+|.. ++..+|||||.... .....+. .+.... +.+|++||+||.|.||+||++
T Consensus 26 ~~~m~i~~i~~~~--~n~~ylI~~~~~~~~ilID~G~~~~-~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~DH~gg~~ 102 (311)
T 2p18_A 26 GSAFSVTVVPTLK--DNFSYLINDHTTHTLAAVDVNADYK-PILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNA 102 (311)
T ss_dssp TTTEEEEEEEETT--TEEEEEEEETTTTEEEEESCCSCCH-HHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHH
T ss_pred CCCcEEEEEecCC--CcEEEEEEeCCCCcEEEEeCCCChH-HHHHHHHHHHhhcCCCCCCCCccEEEeCCCCccccCCHH
Confidence 4568888886643 345999998 68899999984321 0111111 011112 367999999999999999999
Q ss_pred HHHhhcC-----CCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEe-
Q 044504 94 YFLEKTT-----FKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYT- 167 (525)
Q Consensus 94 ~l~~~~~-----~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~- 167 (525)
.|.+.+. .+.+||++..+. +. .....+..++.+.+++.+++++.
T Consensus 103 ~l~~~~~~~~~~~~~~v~~~~~~~----------------------~~--------~~~~~l~~g~~l~lg~~~l~vi~t 152 (311)
T 2p18_A 103 KLKAELEAMNSTVPVVVVGGANDS----------------------IP--------AVTKPVREGDRVQVGDLSVEVIDA 152 (311)
T ss_dssp HHHHHHHSCC--CCCEEEEEGGGT----------------------CT--------TCSEEECTTCEEEETTEEEEEEEC
T ss_pred HHHHhhhhcccCCCCEEEEechhc----------------------CC--------CCceEeCCCCEEEECCeEEEEEEC
Confidence 9987641 146899886541 00 13456788999999999998875
Q ss_pred CCCCcCceEEEEEECC---E-EEEEeecCCCC
Q 044504 168 AGHVLGAAMFMVDIAG---V-RVLYTGDYSRE 195 (525)
Q Consensus 168 ~gH~~gs~~~~i~~~~---~-~ilytGD~~~~ 195 (525)
+||++|+++|+++.++ . +++|+||+.+.
T Consensus 153 PGHT~g~i~~~~~~~~~~~~~~~lftGD~l~~ 184 (311)
T 2p18_A 153 PCHTRGHVLYKVQHPQHPNDGVALFTGDTMFI 184 (311)
T ss_dssp CSSSTTCEEEEEECTTCGGGCEEEEEETTEET
T ss_pred CCCCcccEEEEEecCCcCCcCCEEEEcCcccc
Confidence 5999999999998776 6 99999998653
No 45
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.54 E-value=7.2e-15 Score=151.90 Aligned_cols=132 Identities=22% Similarity=0.294 Sum_probs=97.8
Q ss_pred cCCcEEEEEECCeEEEEecCCCCCcCc-cccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHH
Q 044504 35 VGRSCVYMSYKGKTILFDCGIHPAYSG-MAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKA 113 (525)
Q Consensus 35 vg~s~~ll~~~~~~iLiD~G~~~~~~~-~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~ 113 (525)
.+.|||+|+ ++..+|||||....... ...+... +++.+|++||+||.|.||+||++.|.++++ +.+||+++.+..
T Consensus 33 ~~~n~~li~-~~~~iliD~G~~~~~~~~~~~l~~~--~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~-~~~v~~~~~~~~ 108 (402)
T 1e5d_A 33 TTYNAYLVE-DEKTTLFDTVKAEYKGELLCGIASV--IDPKKIDYLVIQHLELDHAGALPALIEACQ-PEKIFTSSLGQK 108 (402)
T ss_dssp EEEEEEEEC-SSSCEEECCCCGGGHHHHHHHHHTT--SCGGGCCEEEECCCSHHHHTTHHHHHHHHC-CSEEEEEHHHHH
T ss_pred cceEEEEEE-CCCEEEEeCCCCccHHHHHHHHHHh--CCcccCCEEEeCCCCccccccHHHHHHHCC-CCEEEEChHHHH
Confidence 356899999 67899999997411110 1111111 356789999999999999999999987653 579999999887
Q ss_pred HHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeC--CCCcCceEEEEEECCEEEEEeec
Q 044504 114 IYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTA--GHVLGAAMFMVDIAGVRVLYTGD 191 (525)
Q Consensus 114 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~--gH~~gs~~~~i~~~~~~ilytGD 191 (525)
.+...+. . . ......++.++.+.+++.+++++.+ ||++|++++++ ++.+++|+||
T Consensus 109 ~~~~~~~----~----------~-------~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~~~~--~~~~~l~~GD 165 (402)
T 1e5d_A 109 AMESHFH----Y----------K-------DWPVQVVKHGETLSLGKRTVTFYETRMLHWPDSMVSWF--ADEKVLISND 165 (402)
T ss_dssp HHHHHHC----C----------S-------SCCEEEECTTCEEECSSCEEEEEECTTSSSTTCEEEEE--TTTTEEEEET
T ss_pred HHHHHhC----C----------C-------CCceEEcCCCCEEEECCCEEEEEeCCCCCCCCcEEEEE--CCCCEEEecc
Confidence 6554220 0 0 1245778889999999988888754 79999999876 5678999999
Q ss_pred CC
Q 044504 192 YS 193 (525)
Q Consensus 192 ~~ 193 (525)
+.
T Consensus 166 ~~ 167 (402)
T 1e5d_A 166 IF 167 (402)
T ss_dssp TT
T ss_pred cc
Confidence 95
No 46
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.53 E-value=3.1e-15 Score=142.22 Aligned_cols=131 Identities=14% Similarity=0.182 Sum_probs=94.1
Q ss_pred cCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHHH
Q 044504 35 VGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAI 114 (525)
Q Consensus 35 vg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~ 114 (525)
.+.|||+|+.++..+|||||..... .......+....+.+|++|++||.|.||+||++.|.+. +.+||++..+.+.
T Consensus 39 ~~~n~~li~~~~~~iliD~G~~~~~-~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~---~~~v~~~~~~~~~ 114 (227)
T 1mqo_A 39 VPSNGLVLNTSKGLVLVDSSWDDKL-TKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKER---GIKAHSTALTAEL 114 (227)
T ss_dssp EEEEEEEEEETTEEEEESCCSSHHH-HHHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHHHH---TCEEECBHHHHHH
T ss_pred ecceEEEEEeCCeEEEEECCCChHH-HHHHHHHHHHhcCCCceEEEeCCCCchhccchHHHhhC---CcEEEeccchHHH
Confidence 3579999999999999999974210 00011111111147899999999999999999998765 5799999988765
Q ss_pred HHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEE--eCCCCcCceEEEEEECCEEEEEeecC
Q 044504 115 YKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCY--TAGHVLGAAMFMVDIAGVRVLYTGDY 192 (525)
Q Consensus 115 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~--~~gH~~gs~~~~i~~~~~~ilytGD~ 192 (525)
+... + +. .....+..++.+.+++.+++++ .+||++|++++++ ++.+++|+||+
T Consensus 115 ~~~~--------~-------~~--------~~~~~~~~~~~~~~g~~~i~~~~~~pgHt~g~~~~~~--~~~~~lf~GD~ 169 (227)
T 1mqo_A 115 AKKN--------G-------YE--------EPLGDLQTVTNLKFGNMKVETFYPGKGHTEDNIVVWL--PQYNILVGGCL 169 (227)
T ss_dssp HHHT--------T-------CC--------CCCCCBCSEEEEEETTEEEEEECCCCSSSSSCCEEEE--TTTTEEEEETT
T ss_pred HHhc--------C-------CC--------CCccccCCCCeeeECCEEEEEEecCCCCCCCCEEEEE--CCCCEEEEeee
Confidence 4311 0 00 1223455677888999999886 5899999999987 45679999998
Q ss_pred CC
Q 044504 193 SR 194 (525)
Q Consensus 193 ~~ 194 (525)
..
T Consensus 170 ~~ 171 (227)
T 1mqo_A 170 VK 171 (227)
T ss_dssp SC
T ss_pred ee
Confidence 64
No 47
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=99.53 E-value=5.6e-15 Score=140.15 Aligned_cols=154 Identities=12% Similarity=0.140 Sum_probs=94.0
Q ss_pred EEecCCCccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEE
Q 044504 27 TPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVF 106 (525)
Q Consensus 27 ~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy 106 (525)
..+..+...+.|||+|+.++..+|||||..+... ......+..+.+.+|++|++||.|.||+||++.|.+ ++++||
T Consensus 13 ~~~~~~~~~~~n~~li~~~~~~iLiD~G~~~~~~-~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~---~~~~v~ 88 (227)
T 3iog_A 13 YVVEDNYYVQENSMVYFGAKGVTVVGATWTPDTA-RELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKS---IGAKVV 88 (227)
T ss_dssp EEEEECSSSCEEEEEEECSSCEEEESCCSSHHHH-HHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHH---TTCEEE
T ss_pred EEEECCCcccCcEEEEEeCCeEEEEECCCChHHH-HHHHHHHHHhcCCCeEEEEeCCCchhhcChHHHHhh---CCCeEE
Confidence 3344443457899999999999999999643110 000111112456789999999999999999999864 478999
Q ss_pred ecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEE--eCCCCcCceEEEEEECCE
Q 044504 107 MTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCY--TAGHVLGAAMFMVDIAGV 184 (525)
Q Consensus 107 ~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~--~~gH~~gs~~~~i~~~~~ 184 (525)
+++.+...+............... ..+.. .. ........ +..+.+++..++++ .+||++|++++++. +.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~-~~~~~~~~--~~~~~l~~~~~~~~~~~pGHt~g~~~~~~~--~~ 159 (227)
T 3iog_A 89 STRQTRDLMKSDWAEIVAFTRKGL--PEYPD--LP-LVLPNVVH--DGDFTLQEGKVRAFYAGPAHTPDGIFVYFP--DE 159 (227)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHHC--TTSCC--CC-CCCCSEEE--SSCEEETTTTEEEECCCCSSSSSCCEEEET--TT
T ss_pred ECHHHHHHHHHhhHHHHHHhhcCC--CCCCC--cc-ccCCCEee--cCeEEEcCcEEEEEecCCCCCCCcEEEEec--CC
Confidence 999998877654433221110000 00000 00 00011122 22466765445444 48999999999884 55
Q ss_pred EEEEeecCCC
Q 044504 185 RVLYTGDYSR 194 (525)
Q Consensus 185 ~ilytGD~~~ 194 (525)
+++| ||...
T Consensus 160 ~~lf-gd~l~ 168 (227)
T 3iog_A 160 QVLY-GGCIL 168 (227)
T ss_dssp TEEE-CGGGS
T ss_pred CEEE-ccccc
Confidence 6899 77543
No 48
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.53 E-value=3.2e-15 Score=142.61 Aligned_cols=131 Identities=15% Similarity=0.225 Sum_probs=95.4
Q ss_pred CCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHHHH
Q 044504 36 GRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIY 115 (525)
Q Consensus 36 g~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~~ 115 (525)
+.|||+|+.++..+|||||..... .......+......+|++|++||.|.||+||++.|.+ .+.+||+++.+.+.+
T Consensus 36 ~~n~~li~~~~~~iLiD~G~~~~~-~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~---~~~~v~~~~~~~~~~ 111 (232)
T 1a7t_A 36 PSNGMIVINNHQAALLDTPINDAQ-TEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQR---KGVQSYANQMTIDLA 111 (232)
T ss_dssp EEEEEEEEETTEEEEESCCSSHHH-HHHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHHH---TTCEEEEEHHHHHHH
T ss_pred cceEEEEEeCCEEEEEeCCCCHHH-HHHHHHHHHHhcCCCeEEEEeCCCCccccCCHHHHHh---CCCeEEEcHHHHHHH
Confidence 479999999999999999974210 0000111111113679999999999999999999876 367999999887654
Q ss_pred HHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEE--eCCCCcCceEEEEEECCEEEEEeecCC
Q 044504 116 KLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCY--TAGHVLGAAMFMVDIAGVRVLYTGDYS 193 (525)
Q Consensus 116 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~--~~gH~~gs~~~~i~~~~~~ilytGD~~ 193 (525)
... + +. .....+..++.+.+++.+++++ .+||++|++++++ ++.+++|+||+.
T Consensus 112 ~~~--------~-------~~--------~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~g~~~~~~--~~~~~lf~GD~~ 166 (232)
T 1a7t_A 112 KEK--------G-------LP--------VPEHGFTDSLTVSLDGMPLQCYYLGGGHATDNIVVWL--PTENILFGGCML 166 (232)
T ss_dssp HHH--------T-------CC--------CCSEEESSEEEEEETTEEEEEECCCCSSSTTCCEEEE--TTTTEEEEETTS
T ss_pred Hhc--------C-------CC--------CCceecCCCCEEEECCeEEEEEeCCCCCCCCCEEEEE--CCCCEEEEcCcc
Confidence 321 0 00 1235677788899999999997 4899999999987 445799999987
Q ss_pred CC
Q 044504 194 RE 195 (525)
Q Consensus 194 ~~ 195 (525)
..
T Consensus 167 ~~ 168 (232)
T 1a7t_A 167 KD 168 (232)
T ss_dssp CC
T ss_pred cc
Confidence 63
No 49
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.52 E-value=4e-16 Score=150.00 Aligned_cols=141 Identities=10% Similarity=0.147 Sum_probs=94.2
Q ss_pred ccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHH
Q 044504 34 EVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKA 113 (525)
Q Consensus 34 evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~ 113 (525)
..+.|||+|+.++..+|||||...... ......+......+|++||+||.|.||+||++.|.+. +.+||+++.+.+
T Consensus 45 ~~~~n~~li~~~~~~iLID~G~~~~~~-~~l~~~l~~~~~~~i~~vi~TH~H~DH~gg~~~l~~~---~~~v~~~~~~~~ 120 (243)
T 4hl2_A 45 AVASNGLIVRDGGRVLVVDTAWTDDQT-AQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAA---GIATYANALSNQ 120 (243)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSHHHH-HHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHT---TCEEEEEHHHHH
T ss_pred cccceEEEEEECCcEEEEECCCCCccH-HHHHHHHHHhhCCCeeEEEECCCCccccCCHHHHHhC---CCeEEECHHHHH
Confidence 356799999999999999999642110 0001111111123699999999999999999998764 679999998775
Q ss_pred HHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeCCCCcCceEEEEEECCEEEEEeecCC
Q 044504 114 IYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYS 193 (525)
Q Consensus 114 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~gH~~gs~~~~i~~~~~~ilytGD~~ 193 (525)
.+.... .......+. ......+..++.+.++++++....+||++|++++++. +.+++|+||+.
T Consensus 121 ~~~~~~--------~~~~~~~~~-------~~~~~~~~~g~~~~~g~~~v~~~~pGHt~g~~~~~~~--~~~~lf~GD~~ 183 (243)
T 4hl2_A 121 LAPQEG--------MVAAQHSLT-------FAANGWVEPATAPNFGPLKVFYPGPGHTSDNITVGID--GTDIAFGGCLI 183 (243)
T ss_dssp HGGGTT--------CCCCSEEEC-------BCTTSBBCGGGSTTCTTEEEECCCSSSSTTCCEEEET--TTTEEECTTTC
T ss_pred HHhccc--------ccccccccc-------cccceEecCCCeEEECCEEEEeCCCCCCcCCEEEEEc--CCCEEEEccee
Confidence 543210 000000000 0122345567777788999954689999999999884 56799999987
Q ss_pred CC
Q 044504 194 RE 195 (525)
Q Consensus 194 ~~ 195 (525)
..
T Consensus 184 ~~ 185 (243)
T 4hl2_A 184 KD 185 (243)
T ss_dssp CC
T ss_pred ee
Confidence 53
No 50
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.52 E-value=1e-14 Score=141.57 Aligned_cols=131 Identities=16% Similarity=0.178 Sum_probs=93.0
Q ss_pred EEEEEecCCCccCCcEEEEEEC--CeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCC
Q 044504 24 LIITPLGAGNEVGRSCVYMSYK--GKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTF 101 (525)
Q Consensus 24 m~i~~LG~~~evg~s~~ll~~~--~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~ 101 (525)
|+|.++-.++ +.+||+|..+ +..+|||||.. . .....+.... .+|++|++||.|.||+||+..|.+.++
T Consensus 1 m~i~~i~~~~--~n~~yli~~~~~~~~vlID~G~~---~--~i~~~l~~~g-~~i~~IllTH~H~DH~gg~~~l~~~~~- 71 (260)
T 1qh5_A 1 MKVEVLPALT--DNYMYLVIDDETKEAAIVDPVQP---Q--KVVDAARKHG-VKLTTVLTTHHHWDHAGGNEKLVKLES- 71 (260)
T ss_dssp CEEEEEEETT--TEEEEEEEETTTTEEEEESCSSH---H--HHHHHHHHHT-CEEEEEECCCSSHHHHTTHHHHHHHST-
T ss_pred CEEEEEEecC--ceEEEEEEECCCCEEEEEcCCCH---H--HHHHHHHHcC-CCccEEEeCCCCccccCCHHHHHHHCC-
Confidence 4555554442 3569999985 68999999931 1 1111111111 248999999999999999999987753
Q ss_pred CceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEE-eCCCCcCceEEEE-
Q 044504 102 KGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCY-TAGHVLGAAMFMV- 179 (525)
Q Consensus 102 ~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~-~~gH~~gs~~~~i- 179 (525)
+.+||++.... . .....+..++.+.+++.+++++ .+||++|+++|++
T Consensus 72 ~~~v~~~~~~~-------------~------------------~~~~~~~~g~~~~~g~~~~~vi~tPGHt~g~~~~~~~ 120 (260)
T 1qh5_A 72 GLKVYGGDDRI-------------G------------------ALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVS 120 (260)
T ss_dssp TCEEEESCTTS-------------T------------------TCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEEEE
T ss_pred CCEEEECcccC-------------C------------------CCCEEeCCCCEEEECCEEEEEEECCCCCCCCEEEEEe
Confidence 57999875310 0 1235677889999999888885 4799999999998
Q ss_pred EE--CCEEEEEeecCCC
Q 044504 180 DI--AGVRVLYTGDYSR 194 (525)
Q Consensus 180 ~~--~~~~ilytGD~~~ 194 (525)
+. ++.+++|+||+.+
T Consensus 121 ~~~~~~~~~lftGD~l~ 137 (260)
T 1qh5_A 121 KPGGSEPPAVFTGDTLF 137 (260)
T ss_dssp CSSSSSCCEEEEETTEE
T ss_pred ccCCCCCCEEEEcCccc
Confidence 33 4578999999864
No 51
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.51 E-value=1.9e-13 Score=129.08 Aligned_cols=129 Identities=26% Similarity=0.299 Sum_probs=88.3
Q ss_pred cEEEEEecCCCccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCC
Q 044504 23 QLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFK 102 (525)
Q Consensus 23 ~m~i~~LG~~~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~ 102 (525)
.|....+ +++|++|+.++.+||||||.+. .+ ++ ....+||+|||||.|.||++ ++.+. . +
T Consensus 12 ~~~~~~~------~~~~~li~~~~~~iLiD~g~~~--~~---~~----~~~~~id~VliTH~H~DH~~-~~~l~-~---~ 71 (220)
T 1vjn_A 12 HMKITWF------GHACFALEMEGKTIVTDPFDES--VG---YP----IPNVTADVVTESHQHFDHNA-HHLVK-G---N 71 (220)
T ss_dssp CEEEEEE------ETTEEEEEETTEEEEESCCC----------C----CCCCBCSEEECSSCC---CG-GGGCB-S---S
T ss_pred ceeeEEc------cCCEEEEEECCEEEEEcCCCCc--CC---CC----cCCCCcCEEEECCCCCCCCC-chHhc-C---C
Confidence 4555555 4689999999999999999642 11 11 13578999999999999999 77543 1 2
Q ss_pred ceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeCCCCcC-------ce
Q 044504 103 GRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAGHVLG-------AA 175 (525)
Q Consensus 103 ~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~gH~~g-------s~ 175 (525)
.+++ .....+++++++|+++++.|..+ ++
T Consensus 72 ~~vi--------------------------------------------~~~g~~~~~~~~I~~~~~~H~~~~g~~~g~~~ 107 (220)
T 1vjn_A 72 FRVI--------------------------------------------DRPGAYTVNGVKIKGVETFHDPSHGRERGKNI 107 (220)
T ss_dssp CEEE--------------------------------------------CSSEEEEETTEEEEEEEEEEC-------CEEE
T ss_pred CEEE--------------------------------------------cCCCeEEECCEEEEEEeeecCCCCCccCCCcE
Confidence 3333 01125678999999999999862 58
Q ss_pred EEEEEECCEEEEEeecCCCCCcccCccCCCCCCCCcEEEEcCC
Q 044504 176 MFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIEST 218 (525)
Q Consensus 176 ~~~i~~~~~~ilytGD~~~~~~~~~~~~~~~~~~~D~LI~Est 218 (525)
+|.|+.++.+++|+||+...+..... .. ..++|++++|+.
T Consensus 108 g~~i~~~g~~i~~~GDt~~~~~~~~~-~~--~~~~Dvlil~~g 147 (220)
T 1vjn_A 108 VFVFEGEGIKVCHLGDLGHVLTPAQV-EE--IGEIDVLLVPVG 147 (220)
T ss_dssp EEEEEETTEEEEECTTCCSCCCHHHH-HH--HCCCSEEEEECC
T ss_pred EEEEEECCeEEEEeCCCCCcchHHHH-Hh--hCCCCEEEEcCC
Confidence 99999999999999999976642111 11 137999999984
No 52
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.50 E-value=2.1e-14 Score=138.00 Aligned_cols=156 Identities=12% Similarity=0.174 Sum_probs=98.2
Q ss_pred EEecCCCccCCcEEEEEEC-CeEEEEecCCCCCcCccccCCCCCC-CCCCCccEEEcCCCchhHhcChHHHHhhcCCCce
Q 044504 27 TPLGAGNEVGRSCVYMSYK-GKTILFDCGIHPAYSGMAALPYFDE-IDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGR 104 (525)
Q Consensus 27 ~~LG~~~evg~s~~ll~~~-~~~iLiD~G~~~~~~~~~~~~~~~~-~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~ 104 (525)
..+.+....+.|||+|+.+ +..+|||||...... ......+.. +.+..+ +|++||.|.||+||++.|.+ ++.+
T Consensus 20 ~~i~~~~~~~~n~~li~~~~~~~iLiD~G~~~~~~-~~l~~~l~~~~~~~~~-~vi~TH~H~DH~gg~~~l~~---~~~~ 94 (246)
T 2fhx_A 20 FVVTDRDFYSSNVLVAKMLDGTVVIVSSPFENLGT-QTLMDWVAKTMKPKKV-VAINTHFHLDGTGGNEIYKK---MGAE 94 (246)
T ss_dssp EEEEETTTTTEEEEEEECTTSEEEEESCCSSHHHH-HHHHHHHHHHHCCSEE-EEECCSSSHHHHTTHHHHHH---TTCE
T ss_pred EEEECcCCCCCCEEEEEeCCCeEEEEeCCCCHHHH-HHHHHHHHHhcCCCcE-EEEeCCCCccccChHHHHhh---cCCE
Confidence 3344443456799999876 479999999742100 000011111 233445 79999999999999999875 3679
Q ss_pred EEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHh--------cccEEecCCcEEEeCCEEEEEE--eCCCCcCc
Q 044504 105 VFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSM--------DKIEVLDFHQTVEVNGIKFWCY--TAGHVLGA 174 (525)
Q Consensus 105 Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~~~~~~~gi~v~~~--~~gH~~gs 174 (525)
||+++.+.+.+............ ..|....+...+ ..+..+..++.+++++.+++++ .+||++|+
T Consensus 95 v~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~i~~~~~~pGHt~g~ 169 (246)
T 2fhx_A 95 TWSSDLTKQLRLEENKKDRIKAA-----EFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFSNELVEVSFPGPAHSPDN 169 (246)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHH-----HHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEETTEEEEEECCCCSSSTTC
T ss_pred EEEcHHHHHHHHhcchhhhHHHH-----hhhccccchhhhcccccCCCCceeecCCCCEEEECCEEEEEEeCCCCCCCCC
Confidence 99999998876543322110000 000000010000 1223466788899999999887 48999999
Q ss_pred eEEEEEECCEEEEEeecCCC
Q 044504 175 AMFMVDIAGVRVLYTGDYSR 194 (525)
Q Consensus 175 ~~~~i~~~~~~ilytGD~~~ 194 (525)
+++++ ++.+++|+||+..
T Consensus 170 ~~~~~--~~~~~lf~GD~~~ 187 (246)
T 2fhx_A 170 VVVYF--PKKKLLFGGCMIK 187 (246)
T ss_dssp CEEEE--TTTTEEEEETTCC
T ss_pred EEEEE--cCCCEEEECCEec
Confidence 99987 4567999999875
No 53
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.50 E-value=2.9e-14 Score=146.78 Aligned_cols=128 Identities=18% Similarity=0.235 Sum_probs=98.5
Q ss_pred CcEEEEEECCeEEEEecCCCCCcC-ccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHHHH
Q 044504 37 RSCVYMSYKGKTILFDCGIHPAYS-GMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIY 115 (525)
Q Consensus 37 ~s~~ll~~~~~~iLiD~G~~~~~~-~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~~ 115 (525)
-|||||..+++.+|||+|...... -++.+.. .+++.+||+|++||.|.||+|+++.++++++.+.+|++++.+..++
T Consensus 52 yNsYLI~~~~~~vLIDtg~~~~~~~~l~~l~~--~i~~~~IdyIi~TH~h~DH~G~l~~l~~~~~~~~~v~~s~~~~~~l 129 (410)
T 4dik_A 52 YNAYLVKLNGANVLIDGWKGNYAKEFIDALSK--IVDPKEITHIIVNHTEPDASGSLPATLKTIGHDVEIIASNFGKRLL 129 (410)
T ss_dssp EEEEEEECSSCEEEECCCCGGGHHHHHHHHTT--TSCGGGCCEEECSCCCHHHHTTHHHHHHHHCSCCEEEECHHHHHHH
T ss_pred EEEEEEEECCeEEEEeCCCcchHHHHHHHHHH--hcCcccCCEEEeCcCCcchhhhHHHHHHHcCCCCEEEeCHHHHHHH
Confidence 389999999999999999532111 1112211 2467889999999999999999999998877678999999888766
Q ss_pred HHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEe-CC-CCcCceEEEEEECCEEEEEeecCC
Q 044504 116 KLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYT-AG-HVLGAAMFMVDIAGVRVLYTGDYS 193 (525)
Q Consensus 116 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~-~g-H~~gs~~~~i~~~~~~ilytGD~~ 193 (525)
+.... ...+..++.++++++++.+++++. +| |++|+++++. + +++||||..
T Consensus 130 ~~~~~-----------------------~~~~~~v~dGd~l~lG~~~L~~i~tPg~H~p~~~~~y~--~--~iLFsgD~f 182 (410)
T 4dik_A 130 EGFYG-----------------------IKDVTVVKDGEEREIGGKKFKFVMTPWLHWPDTMVTYL--D--GILFSCDVG 182 (410)
T ss_dssp HHHHC-----------------------CCCEEECCTTCEEEETTEEEEEEECTTSSSTTCEEEEE--T--TEEEEETTT
T ss_pred HhhcC-----------------------ccceeEecCCCEEeecceEEEEecCCCCCCCCCeeEEe--C--CceEccccc
Confidence 54321 024677899999999999998864 56 9999988875 3 599999975
No 54
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.50 E-value=3.9e-15 Score=144.79 Aligned_cols=130 Identities=13% Similarity=0.150 Sum_probs=94.3
Q ss_pred CCcEEEEEECCeEEEEecCCCCCcCc-cccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHHH
Q 044504 36 GRSCVYMSYKGKTILFDCGIHPAYSG-MAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAI 114 (525)
Q Consensus 36 g~s~~ll~~~~~~iLiD~G~~~~~~~-~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~ 114 (525)
..|||+|+. ++.+|||||....... ...+.. .+++.+|++|++||.|.||+||++.+.+++. +.+||+++.+...
T Consensus 42 ~~N~yli~~-~~~iLID~G~~~~~~~~~~~l~~--~~~~~~i~~IilTH~H~DH~gg~~~l~~~~~-~~~v~~~~~~~~~ 117 (262)
T 3hnn_A 42 TSNSYVIEG-DKTAIIDPPVESFMKIYLEALQQ--TVNLKKLDYVILGHFSPNRIPTFKALLELAP-QITFVCSLPAAGD 117 (262)
T ss_dssp EEEEEEEES-SSEEEECCCCHHHHHHHHHHHHH--HSCGGGEEEEECSSCCGGGHHHHHHHHHHCT-TCEEEECHHHHHH
T ss_pred EEEEEEEEC-CCEEEEECCCcchHHHHHHHHHH--hCChhhCCEEEECCCCcchhchHHHHHHHCC-CCEEEECHHHHHH
Confidence 458999997 7899999996310000 011110 1345789999999999999999999987743 6899999988776
Q ss_pred HHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeC-CEEEEEE-eCC-CCcCceEEEEEECCEEEEEeec
Q 044504 115 YKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVN-GIKFWCY-TAG-HVLGAAMFMVDIAGVRVLYTGD 191 (525)
Q Consensus 115 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-gi~v~~~-~~g-H~~gs~~~~i~~~~~~ilytGD 191 (525)
+...+.. . ......++.++.++++ +.+++++ .+| |++|++++++ ++.+++|+||
T Consensus 118 l~~~~~~----------------~-----~~~~~~~~~g~~l~lg~~~~~~~i~tpg~Ht~g~~~~~~--~~~~~lfsGD 174 (262)
T 3hnn_A 118 LRAAFPD----------------D-----NLNILPMRGKETLDLGKGHVLKFLPIPSPRWPAGLCTYD--VQTQILYTDK 174 (262)
T ss_dssp HHHHSSS----------------S-----CCEEEECCSSCEEECSTTCEEEEEECCCSSCTTCEEEEE--TTTTEEEEET
T ss_pred HHHHhCC----------------C-----CCceEEeCCCCEEEcCCCcEEEEEECCCCCCCCeeEEEe--CCCCEEEEee
Confidence 5432110 0 1245778889999998 8888775 457 9999988876 5567999999
Q ss_pred C
Q 044504 192 Y 192 (525)
Q Consensus 192 ~ 192 (525)
+
T Consensus 175 ~ 175 (262)
T 3hnn_A 175 I 175 (262)
T ss_dssp T
T ss_pred c
Confidence 8
No 55
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.50 E-value=1e-14 Score=140.99 Aligned_cols=132 Identities=16% Similarity=0.157 Sum_probs=93.1
Q ss_pred EEEEEecCCCccCCcEEEEEEC--CeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCC
Q 044504 24 LIITPLGAGNEVGRSCVYMSYK--GKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTF 101 (525)
Q Consensus 24 m~i~~LG~~~evg~s~~ll~~~--~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~ 101 (525)
|+|..+-..+ ..+||+|..+ +..+|||||... ..... +... ..+|++|++||.|.||+||++.|.+++
T Consensus 1 m~i~~~~~~~--~n~~yli~~~~~~~~~lID~g~~~--~i~~~---l~~~-g~~i~~Il~TH~H~DH~gg~~~l~~~~-- 70 (254)
T 1xm8_A 1 MQIELVPCLK--DNYAYILHDEDTGTVGVVDPSEAE--PIIDS---LKRS-GRNLTYILNTHHHYDHTGGNLELKDRY-- 70 (254)
T ss_dssp CEEEEEEETT--TEEEEEEECTTTCCEEEECCSSHH--HHHHH---HHHH-TCCCCEEECSSCCHHHHTTHHHHHHHH--
T ss_pred CEEEEecccC--CeEEEEEEECCCCEEEEEeCCCHH--HHHHH---HHHc-CCCccEEEECCCCCcccccHHHHHHHc--
Confidence 4455554422 2359999875 578999999311 01111 1111 136899999999999999999998775
Q ss_pred CceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEe-CCCCcCceEEEEE
Q 044504 102 KGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYT-AGHVLGAAMFMVD 180 (525)
Q Consensus 102 ~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~-~gH~~gs~~~~i~ 180 (525)
+.+||++..+...+. .....+..++.+.+++.+++++. +||++|+++|++.
T Consensus 71 ~~~v~~~~~~~~~~~----------------------------~~~~~~~~g~~~~lg~~~~~vi~tPGHt~g~~~~~~~ 122 (254)
T 1xm8_A 71 GAKVIGSAMDKDRIP----------------------------GIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFP 122 (254)
T ss_dssp CCEEEEEGGGGGGST----------------------------TEEEEECTTCEEEETTEEEEEEECCSSSSSCEEEEEG
T ss_pred CCeEEEchhhhhcCC----------------------------CCceeeCCCCEEEECCEEEEEEECCCCCCCcEEEEEC
Confidence 579999876532110 02356778899999999988864 7999999999984
Q ss_pred ECCEEEEEeecCCCC
Q 044504 181 IAGVRVLYTGDYSRE 195 (525)
Q Consensus 181 ~~~~~ilytGD~~~~ 195 (525)
+.+++|+||+.+.
T Consensus 123 --~~~~lftGD~l~~ 135 (254)
T 1xm8_A 123 --GSRAIFTGDTMFS 135 (254)
T ss_dssp --GGTEEEEETTEET
T ss_pred --CCCEEEEcCcccc
Confidence 4569999999753
No 56
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.48 E-value=5.3e-14 Score=139.69 Aligned_cols=159 Identities=21% Similarity=0.250 Sum_probs=100.6
Q ss_pred EEEecCCCccCCcEEEE-EECCeEEEEecCCCCCcCc-cccCCCCCCC-CCCCccEEEcCCCchhHhcChHHHHhhcCCC
Q 044504 26 ITPLGAGNEVGRSCVYM-SYKGKTILFDCGIHPAYSG-MAALPYFDEI-DPSAIDVLLITHFHLDHAASLPYFLEKTTFK 102 (525)
Q Consensus 26 i~~LG~~~evg~s~~ll-~~~~~~iLiD~G~~~~~~~-~~~~~~~~~~-~~~~Id~IliTH~H~DH~gglp~l~~~~~~~ 102 (525)
+..+|. .+.|||+| ..++..+|||||....... ...+... + ++.+|++|++||.|.||+||++.|.++++ +
T Consensus 16 v~~ig~---~~~n~~li~~~~~~~iLID~G~~~~~~~~~~~l~~~--~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~-~ 89 (303)
T 2vw8_A 16 LCLLGD---VQVPVFLLRLGEASWALVEGGISRDAELVWADLCRW--VADPSQVHYWLITHKHYDHCGLLPYLCPRLP-N 89 (303)
T ss_dssp EEEESC---TTSCEEEEEEETTEEEEECCCCGGGHHHHHHHHHHH--CSCGGGEEEEECCCCSTTTTTTHHHHGGGCT-T
T ss_pred eEEecC---CCceEEEEEeCCCceEEEECCCCCcHHHHHHHHHHH--hcCcccceEEEeccCCccccCCHHHHHHhCC-C
Confidence 344543 35799999 4889999999997421110 0111111 1 45789999999999999999999887642 6
Q ss_pred ceEEecHHHHHHHHHHHHH--HHhhhc--cccCCCCCCHHHHHHHhcccEEecCCcEEEeCC-EEEEEE-eCCCCcCceE
Q 044504 103 GRVFMTHATKAIYKLLLTD--YVKVSK--VSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNG-IKFWCY-TAGHVLGAAM 176 (525)
Q Consensus 103 ~~Iy~t~~t~~~~~~~l~d--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g-i~v~~~-~~gH~~gs~~ 176 (525)
++||+++.+.+.+...... ...... ...+.......... ......+..++.+++++ .+++++ .+||++|+++
T Consensus 90 a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~lg~g~~l~~i~~pGHt~g~~~ 167 (303)
T 2vw8_A 90 VQVLASERTCQAWKSESAVRVVERLNRQLLRAEQRLPEACAWD--ALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVV 167 (303)
T ss_dssp CEEEEEHHHHHHTTCHHHHHHHHHHHHHTCCTTCCCCCCCCGG--GSCEEEECTTCEEEEETTEEEEEEECTTSSTTCEE
T ss_pred CeEEECHHHHHHHhccchhhHHHHHHHHHHHhhcccccccCCC--CCCceEcCCCCEEecCCCeEEEEEECCCCCcccEE
Confidence 8999999887654321110 000000 00000000000000 01236678899999977 888876 4699999999
Q ss_pred EEEEECCEEEEEeecCCC
Q 044504 177 FMVDIAGVRVLYTGDYSR 194 (525)
Q Consensus 177 ~~i~~~~~~ilytGD~~~ 194 (525)
|++. +.+++|+||...
T Consensus 168 ~~~~--~~~~lf~GD~~~ 183 (303)
T 2vw8_A 168 FYDV--RRRRLFCGDALG 183 (303)
T ss_dssp EEET--TTTEEEEETTTC
T ss_pred EEEC--CCCEEEEcCccC
Confidence 9884 567999999853
No 57
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=99.48 E-value=3.7e-14 Score=138.10 Aligned_cols=136 Identities=15% Similarity=0.143 Sum_probs=92.0
Q ss_pred cCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHHH
Q 044504 35 VGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAI 114 (525)
Q Consensus 35 vg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~ 114 (525)
.+.|||+|+.++..+|||||...... ......+......+|++|++||.|.||+||+..+.+. +.+||+++.+.+.
T Consensus 66 ~~~n~~li~~~~~~iLID~G~~~~~~-~~l~~~l~~~~g~~i~~VilTH~H~DH~gg~~~~~~~---~a~v~~~~~~~~~ 141 (265)
T 2y8b_A 66 YSSNGLIVRDADELLLIDTAWGAKNT-VALLAEIEKQIGLPVTRSISTHFHDDRVGGVDVLRAA---GVATYTSPLTRQL 141 (265)
T ss_dssp EEEEEEEEEETTEEEEESCCSSHHHH-HHHHHHHHHHTCSCEEEEECSSSSHHHHTTHHHHHHT---TCEEEECHHHHHH
T ss_pred ccceEEEEEECCeEEEEeCCCCHHHH-HHHHHHHHHhcCCCeEEEEeCCCChhhcCCHHHHhhC---CCeEEECHHHHHH
Confidence 35799999999999999999742100 0000111111023799999999999999999988652 6799999988765
Q ss_pred HHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeCCCCcCceEEEEEECCEEEEEeecCCC
Q 044504 115 YKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSR 194 (525)
Q Consensus 115 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~gH~~gs~~~~i~~~~~~ilytGD~~~ 194 (525)
+.... . .... ..+ . ...+.++.+.++++++....+||++|+++++++ +.+++|+||+..
T Consensus 142 ~~~~~----~---~~~~-~~~---------~--~~~~~~~~~~~g~~~v~~~~pGHt~g~~~~~~~--~~~~lf~GD~~~ 200 (265)
T 2y8b_A 142 AEAAG----N---EVPA-HSL---------K--ALSSSGDVVRFGPVEVFYPGAAHSGDNLVVYVP--AVRVLFGGCAVH 200 (265)
T ss_dssp HHHTT----C---CCCS-EEC---------S--SCSSTTEEEEETTEEEEECCSSSSTTCCEEEET--TTTEEEEETTSC
T ss_pred HHhcc----c---cccc-ccc---------c--ccCCCCcEEeecCEEEEecCCCCCCCCEEEEec--CCCEEEEccccc
Confidence 44210 0 0000 000 0 012456777788888876689999999999874 457999999876
Q ss_pred C
Q 044504 195 E 195 (525)
Q Consensus 195 ~ 195 (525)
.
T Consensus 201 ~ 201 (265)
T 2y8b_A 201 E 201 (265)
T ss_dssp C
T ss_pred c
Confidence 4
No 58
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.48 E-value=7.7e-15 Score=155.05 Aligned_cols=144 Identities=12% Similarity=0.155 Sum_probs=102.4
Q ss_pred CcEEEEEecCCCccCCcEEEE--EECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhc
Q 044504 22 DQLIITPLGAGNEVGRSCVYM--SYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKT 99 (525)
Q Consensus 22 ~~m~i~~LG~~~evg~s~~ll--~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~ 99 (525)
++|+|..+-.+. .+.|||+| +.++..+|||||.... .+ +..+... ..+|++||+||.|.||+||++.|.+++
T Consensus 2 ~~m~i~~~~~~~-~~~n~yli~~~~~~~~ilID~g~~~~--~~--~~~l~~~-~~~i~~Il~TH~H~DH~gg~~~l~~~~ 75 (474)
T 3tp9_A 2 NAMYLRRFYDEG-LAHASYLVGCQETGEACVIDPARDVE--PY--LLTAKRE-GLRIVAALETHIHADFVSGAREMADRA 75 (474)
T ss_dssp CCEEEEEEEETT-TTEEEEEEEETTTCEEEEESCCSCCH--HH--HHHHHHH-TCEEEEEECSSCCSSSCCCHHHHHHHH
T ss_pred CceEEEEEecCC-ceeEEEEEEECCCCEEEEEcCCCChH--HH--HHHHHHc-CCeeEEEEcCcCchhhhCCHHHHHHHH
Confidence 467777664433 35799999 5678999999995321 11 1111111 236899999999999999999998774
Q ss_pred CCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEE-eCCCCcCceEEE
Q 044504 100 TFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCY-TAGHVLGAAMFM 178 (525)
Q Consensus 100 ~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~-~~gH~~gs~~~~ 178 (525)
+.+||+++.+...+.. .+. .......+..++.+.+++++++++ .+||++|+++|+
T Consensus 76 --~~~i~~~~~~~~~~~~----------------~~~------~~~~~~~~~~g~~~~~g~~~i~~i~tPGHt~g~~~~~ 131 (474)
T 3tp9_A 76 --GAAICVSDEGPPEWKS----------------EYV------KAYPHRLLKDGDELHFGNVRIVVMHTPGHTPEHVSYL 131 (474)
T ss_dssp --CCEEEEECCSCGGGCC----------------GGG------GGSSEEEECTTCEEEETTEEEEEEECCSSSSSCEEEE
T ss_pred --CCcEEEcCcchhhhcc----------------ccc------ccccceECCCCCEEEECCEEEEEEECCCCCCCCEEEE
Confidence 6799988765422110 000 001336788899999999999886 579999999999
Q ss_pred EEECCE-----EEEEeecCCCC
Q 044504 179 VDIAGV-----RVLYTGDYSRE 195 (525)
Q Consensus 179 i~~~~~-----~ilytGD~~~~ 195 (525)
+...+. +++||||+.+.
T Consensus 132 ~~~~~~~~~~~~~lftGD~lf~ 153 (474)
T 3tp9_A 132 LYDGKTSPDVPMALFSGDFVFV 153 (474)
T ss_dssp EEETTTEEEEEEEEEEETSEET
T ss_pred EecCCCCCCCceEEEeCCcccc
Confidence 987755 89999999753
No 59
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.47 E-value=2.5e-14 Score=141.15 Aligned_cols=135 Identities=15% Similarity=0.224 Sum_probs=93.4
Q ss_pred cCCcEEEEEECCeEEEEecCCCCCcCccccC-CCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcC--CCceEEecHHH
Q 044504 35 VGRSCVYMSYKGKTILFDCGIHPAYSGMAAL-PYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTT--FKGRVFMTHAT 111 (525)
Q Consensus 35 vg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~-~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~--~~~~Iy~t~~t 111 (525)
.|.|||+|+.++..+|||||..........+ ..+.. ...+|++||+||.|.||+||++.|.+.+. ...++|+...+
T Consensus 30 ~~~n~~li~~~~~~ilID~G~~~~~~~~~~l~~~l~~-~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~~~~~v~~~~~~ 108 (289)
T 4ad9_A 30 QGTNTYLVGTGPRRILIDTGEPAIPEYISCLKQALTE-FNTAIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRN 108 (289)
T ss_dssp TCCEEEEECSSSSEEEECCCSTTCHHHHHHHHHHHHH-TTCCEEEEECSCSSHHHHTTHHHHHHHSCCSSCCCEEECCCS
T ss_pred CceEEEEEecCCceEEEeCCCCCChHHHHHHHHHHHH-cCCCceEEEEcCCCCcccccHHHHHHhhccCCCceEEecCCC
Confidence 3689999999899999999963211111111 01111 12379999999999999999999988752 25678876533
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEe-CCCCcCceEEEEEECCEEEEEee
Q 044504 112 KAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYT-AGHVLGAAMFMVDIAGVRVLYTG 190 (525)
Q Consensus 112 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~-~gH~~gs~~~~i~~~~~~ilytG 190 (525)
.. ....+.. ....+..+..++.+.+++.+++++. +||++|+++|++. +.+++|+|
T Consensus 109 ~~-----------------~~~~~~~-----~~~~~~~~~~g~~~~~gg~~~~~~~~pGHt~~~~~~~~~--~~~~lftG 164 (289)
T 4ad9_A 109 PQ-----------------REEIIGN-----GEQQYVYLKDGDVIKTEGATLRVLYTPGHTDDHMALLLE--EENAIFSG 164 (289)
T ss_dssp SC-----------------CCCCBTT-----TTBCEEECCTTCEEEETTEEEEEEECCSSSTTCEEEEET--TTTEEEEE
T ss_pred cc-----------------hhhhccC-----CCCceEEcCCCCEEEeCCeEEEEEECCCCCCCCEEEEEc--CCCEEEEe
Confidence 10 0000100 1135678889999999999999875 5999999999984 45699999
Q ss_pred cCCC
Q 044504 191 DYSR 194 (525)
Q Consensus 191 D~~~ 194 (525)
|+..
T Consensus 165 D~~~ 168 (289)
T 4ad9_A 165 DCIL 168 (289)
T ss_dssp TSSC
T ss_pred cccC
Confidence 9754
No 60
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.46 E-value=7e-14 Score=144.57 Aligned_cols=133 Identities=10% Similarity=0.136 Sum_probs=97.3
Q ss_pred CCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCC----CCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHH
Q 044504 36 GRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEI----DPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHAT 111 (525)
Q Consensus 36 g~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~----~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t 111 (525)
..|||+|+.++..+|||||.......+ ...+... ++.+|++|++||.|.||+||++.+.++++ +.+||+++.+
T Consensus 34 ~~n~~li~~~~~~iLiD~g~~~~~~~~--~~~l~~~~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~p-~~~v~~~~~~ 110 (404)
T 2ohh_A 34 TYNAYLVCGDEGVALIDNSYPGTFDEL--MARVEDALQQVGMERVDYIIQNHVEKDHSGVLVELHRRFP-EAPIYCTEVA 110 (404)
T ss_dssp EECCEEEECSSCEEEECCCCTTCHHHH--HHHHHHHHHHHTCCCCCEEECSCCSHHHHTTHHHHHHHST-TCCEEECHHH
T ss_pred eEEEEEEEeCCcEEEEeCCCCccHHHH--HHHHHHHhccCCccCCCEEEeCCCCCcccchHHHHHHHCC-CCEEEECHHH
Confidence 358999998888999999974211111 1111112 45789999999999999999999987652 6799999988
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeC--CCCcCceEEEEEECCEEEEEe
Q 044504 112 KAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTA--GHVLGAAMFMVDIAGVRVLYT 189 (525)
Q Consensus 112 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~--gH~~gs~~~~i~~~~~~ilyt 189 (525)
.+.+...+ ... .......+..++.+.+++.+++++.+ ||++|++++++. +.+++|+
T Consensus 111 ~~~~~~~~----~~~----------------~~~~~~~~~~g~~~~~g~~~i~~~~~p~gH~~~~~~~~~~--~~~~lf~ 168 (404)
T 2ohh_A 111 VKGLLKHY----PSL----------------REAEFMTVKTGDVLDLGGKTLTFLETPLLHWPDSMFTLLD--EDGILFS 168 (404)
T ss_dssp HHHHHHHC----GGG----------------GGSCEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEEE--TTTEEEC
T ss_pred HHHHHHHh----ccc----------------ccCCceEcCCCCEEEECCEEEEEEeCCCCCCCCceEEEEC--CCcEEEe
Confidence 76654321 000 01245678889999999988888764 799999999875 4569999
Q ss_pred ecCC
Q 044504 190 GDYS 193 (525)
Q Consensus 190 GD~~ 193 (525)
||+.
T Consensus 169 GD~~ 172 (404)
T 2ohh_A 169 NDAF 172 (404)
T ss_dssp TTTT
T ss_pred cCcc
Confidence 9986
No 61
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.45 E-value=4.8e-14 Score=135.56 Aligned_cols=136 Identities=18% Similarity=0.204 Sum_probs=97.3
Q ss_pred cEEEEEecCCCccCCcEEEEEEC----CeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhh
Q 044504 23 QLIITPLGAGNEVGRSCVYMSYK----GKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEK 98 (525)
Q Consensus 23 ~m~i~~LG~~~evg~s~~ll~~~----~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~ 98 (525)
.|.|..+... ..+.+||+|+.+ +..+|||||.... . .....+.... .+|++||+||.|.||+||++.|.+.
T Consensus 2 ~m~~~~~~~~-~~~~~~yli~~~~~~~~~~ilID~g~~~~-~--~~~~~l~~~g-~~i~~Il~TH~H~DH~gg~~~l~~~ 76 (245)
T 2gcu_A 2 KLLFRQLFEN-ESSTFTYLLADVSHPDKPALLIDPVDKTV-D--RDLKLIDELG-LKLIYAMNTHVHADHVTGTGLLKTK 76 (245)
T ss_dssp CEEEEEEEET-TTTEEEEEEEETTSTTCEEEEESCBGGGH-H--HHHHHHHHHT-CEEEEEECSSCCSSSCBSHHHHHHH
T ss_pred CcEEEEeecC-CCceEEEEEEcCCCCCCcEEEEeCCCchH-H--HHHHHHHHCC-CeeeEEEeCCCChhhhhhHHHHHHh
Confidence 3666666433 236799999984 6899999996310 0 0011111111 2489999999999999999998764
Q ss_pred cCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEe-CCCCcCceEE
Q 044504 99 TTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYT-AGHVLGAAMF 177 (525)
Q Consensus 99 ~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~-~gH~~gs~~~ 177 (525)
. .+.+||++..+.. .....+..++.+.+++.+++++. +||++|+++|
T Consensus 77 ~-~~~~v~~~~~~~~-------------------------------~~~~~~~~g~~~~~g~~~i~v~~tpGHt~g~~~~ 124 (245)
T 2gcu_A 77 L-PGVKSVISKASGS-------------------------------KADLFLEPGDKVSIGDIYLEVRATPGHTAGCVTY 124 (245)
T ss_dssp S-TTCEEEEEGGGCC-------------------------------CCSEEECTTCEEEETTEEEEEEECCSSSTTCEEE
T ss_pred C-CCCeEEecccccc-------------------------------cCCEEcCCCCEEEECCEEEEEEECCCCCCCCEEE
Confidence 3 3679999876421 12356788999999999998864 6999999999
Q ss_pred EEEECC----EEEEEeecCCCC
Q 044504 178 MVDIAG----VRVLYTGDYSRE 195 (525)
Q Consensus 178 ~i~~~~----~~ilytGD~~~~ 195 (525)
++...+ .+++|+||+...
T Consensus 125 ~~~~~~~~~~~~~lftGD~~~~ 146 (245)
T 2gcu_A 125 VTGEGADQPQPRMAFTGDAVLI 146 (245)
T ss_dssp EECCSTTSCSSCEEEEETTSBT
T ss_pred EECCccccccccEEEECCcccc
Confidence 997542 379999999754
No 62
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.42 E-value=8.9e-14 Score=143.45 Aligned_cols=131 Identities=18% Similarity=0.173 Sum_probs=95.3
Q ss_pred CCcEEEEEECCeEEEEecCCCCCcCccccCCCCCC-CCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHHH
Q 044504 36 GRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDE-IDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAI 114 (525)
Q Consensus 36 g~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~-~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~ 114 (525)
..|||+|+. ++.+|||||.......+ ...+.. +++.+|++||+||.|.||+||++.+.++++ +.+||+++.+...
T Consensus 35 ~~n~~li~~-~~~iliD~g~~~~~~~~--~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~-~~~v~~~~~~~~~ 110 (398)
T 1ycg_A 35 TYNAYLIVD-DKTALVDTVYEPFKEEL--IAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMELCP-DAHVLCTQRAFDS 110 (398)
T ss_dssp EECCEEECS-SSCEEECCCCGGGHHHH--HHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHHCT-TCEEEECHHHHHH
T ss_pred eEEEEEEEC-CCEEEEeCCCcccHHHH--HHHHHHhcCcccCCEEEeCCCCcchhhhHHHHHHHCC-CCEEEEcHHHHHH
Confidence 468999995 57999999974111111 111111 356789999999999999999999987752 6799999988765
Q ss_pred HHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEe-C-CCCcCceEEEEEECCEEEEEeecC
Q 044504 115 YKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYT-A-GHVLGAAMFMVDIAGVRVLYTGDY 192 (525)
Q Consensus 115 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~-~-gH~~gs~~~~i~~~~~~ilytGD~ 192 (525)
+...+ .. . ......+..++.+.+++.+++++. + ||++|++++++ ++.+++|+||+
T Consensus 111 l~~~~----~~----------~-------~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~~~~--~~~~~lf~GD~ 167 (398)
T 1ycg_A 111 LKAHY----SH----------I-------DFNYTIVKTGTSVSLGKRSLTFIEAPMLHWPDSMFTYV--PEEALLLPNDA 167 (398)
T ss_dssp HHHHT----CS----------C-------CCEEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEE--TTTTEEEEETT
T ss_pred HHHHh----CC----------C-------CcceEEeCCCCEEeeCCcEEEEEeCCCCCCCCcEEEEE--CCCcEEEeccc
Confidence 54321 00 0 024567888999999998888875 4 79999998876 56789999998
Q ss_pred C
Q 044504 193 S 193 (525)
Q Consensus 193 ~ 193 (525)
.
T Consensus 168 ~ 168 (398)
T 1ycg_A 168 F 168 (398)
T ss_dssp T
T ss_pred c
Confidence 4
No 63
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.42 E-value=4.6e-14 Score=134.22 Aligned_cols=130 Identities=13% Similarity=0.164 Sum_probs=87.4
Q ss_pred ccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHH
Q 044504 34 EVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKA 113 (525)
Q Consensus 34 evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~ 113 (525)
..+.|||+|+.++..+|||||...... ......+.... .+|++|++||.|.||+||++.|.+ ++.+||+++.+.+
T Consensus 30 ~~~~n~~li~~~~~~iliD~g~~~~~~-~~~~~~l~~~g-~~i~~ii~TH~H~DH~gg~~~l~~---~~~~v~~~~~~~~ 104 (228)
T 1jjt_A 30 VVPKHGLVVLVNAEAYLIDTPFTAKDT-EKLVTWFVERG-YKIKGSISSHFHSDSTGGIEWLNS---RSIPTYASELTNE 104 (228)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSHHHH-HHHHHHHHTTT-CEEEEEECSSSSHHHHTTHHHHHH---TTCCEEEEHHHHH
T ss_pred cccceEEEEEECCcEEEEeCCCChhhH-HHHHHHHHHcC-CCeeEEEeCCCChhhhccHHHHHh---CCCEEEEChHHHH
Confidence 356799999999999999999742100 00011111121 279999999999999999999875 2679999998876
Q ss_pred HHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEE--eCCCCcCceEEEEEECCEEEEEeec
Q 044504 114 IYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCY--TAGHVLGAAMFMVDIAGVRVLYTGD 191 (525)
Q Consensus 114 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~--~~gH~~gs~~~~i~~~~~~ilytGD 191 (525)
.+.... . .+ ....+. ++.+.+++..++++ .+||++|++++++. +.+++|+||
T Consensus 105 ~~~~~~--------~-----~~----------~~~~~~-g~~~~l~~~~i~~~~~~pGHt~g~~~~~~~--~~~~lf~GD 158 (228)
T 1jjt_A 105 LLKKDG--------K-----VQ----------ATNSFS-GVNYWLVKNKIEVFYPGPGHTPDNVVVWLP--ERKILFGGC 158 (228)
T ss_dssp HHHHTT--------C-----CC----------CSEEEC-SSCCEEETTTEEEECCCCSSSTTCCEEEET--TTTEEEEET
T ss_pred HHHhcC--------C-----cC----------cccccc-CcceEecCceEEEEecCCCCCCCcEEEEEC--CCcEEEEec
Confidence 543210 0 00 001121 34455666566664 68999999999874 457999999
Q ss_pred CCC
Q 044504 192 YSR 194 (525)
Q Consensus 192 ~~~ 194 (525)
+..
T Consensus 159 ~~~ 161 (228)
T 1jjt_A 159 FIK 161 (228)
T ss_dssp TCC
T ss_pred ccc
Confidence 874
No 64
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.40 E-value=1.5e-14 Score=141.26 Aligned_cols=142 Identities=9% Similarity=0.137 Sum_probs=89.2
Q ss_pred CccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHH
Q 044504 33 NEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATK 112 (525)
Q Consensus 33 ~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~ 112 (525)
+.++.|||+|..++..+|||+|..... ....+..+......+|++|++||.|.||+||+..|.+. ..++|+++.+.
T Consensus 71 G~~~~N~ylv~~~~~~ilIDtg~~~~~-~~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg~~~l~~~---~~~v~~~~~~~ 146 (270)
T 4eyb_A 71 GAVASNGLIVRDGGRVLVVDTAWTDDQ-TAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAA---GIATYANALSN 146 (270)
T ss_dssp EEEEEEEEEEEETTEEEEESCCSSHHH-HHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHT---TCEEEEEHHHH
T ss_pred CccceEEEEEEECCEEEEEeCCCCHHH-HHHHHHHHHHhcCCceEEEEeCCCChhhcCcHHHHHHC---CCeEEECHHHH
Confidence 344579999999999999999974321 00111111111235799999999999999999998764 67999999877
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeCCCCcCceEEEEEECCEEEEEeecC
Q 044504 113 AIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDY 192 (525)
Q Consensus 113 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~gH~~gs~~~~i~~~~~~ilytGD~ 192 (525)
+++... ........+. ......++.+..+..+++.+....+||++|++++++ ++.+++|+||+
T Consensus 147 ~~~~~~--------~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~pgHT~g~~~~~~--~~~~vLfsGD~ 209 (270)
T 4eyb_A 147 QLAPQE--------GMVAAQHSLT-------FAANGWVEPATAPNFGPLKVFYPGPGHTSDNITVGI--DGTDIAFGGCL 209 (270)
T ss_dssp HHGGGG--------TCCCCSEEEC-------BCTTSBBCGGGSTTCTTEEEECCCSSSSSSCCEEEE--TTSSEEECTTT
T ss_pred HHHHhc--------CccccccccC-------CCCceeecCceeeecCceeEEecccccCCCCEEEEe--cCCcEEEEeCe
Confidence 654321 0000000000 001111222333334556665667999999998776 56679999998
Q ss_pred CCC
Q 044504 193 SRE 195 (525)
Q Consensus 193 ~~~ 195 (525)
-+.
T Consensus 210 l~~ 212 (270)
T 4eyb_A 210 IKD 212 (270)
T ss_dssp CCC
T ss_pred ecC
Confidence 653
No 65
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.39 E-value=4.1e-14 Score=148.90 Aligned_cols=146 Identities=14% Similarity=0.210 Sum_probs=101.0
Q ss_pred CCCcEEEEEecCCCccCCcEEEEE--ECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHh
Q 044504 20 EGDQLIITPLGAGNEVGRSCVYMS--YKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLE 97 (525)
Q Consensus 20 ~~~~m~i~~LG~~~evg~s~~ll~--~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~ 97 (525)
...+|+|..+-.+ ..+.|||+|. .++..+|||||.... .+ +..+.. ...+|++|++||.|.||+||+..|.+
T Consensus 21 ~~~~m~i~~~~~~-~~~~nsyli~~~~~~~~vlID~g~~~~--~~--~~~l~~-~g~~i~~Il~TH~H~DH~gg~~~l~~ 94 (466)
T 3r2u_A 21 QSNAMFFKQFYDK-HLSQASYLIGCQKTGEAMIIDPIRDLS--SY--IRVADE-EGLTITHAAETHIHADFASGIRDVAI 94 (466)
T ss_dssp --CCEEEEEEEET-TTTEEEEEEEETTTCEEEEESCCSCCH--HH--HHHHHH-HTCEEEEEECSSCCSSSCCCHHHHHH
T ss_pred cCCCeEEEEEecC-CccceEEEEEeCCCCEEEEEcCCCCHH--HH--HHHHHH-CCCeeeEEEECCCChhhhccHHHHHH
Confidence 4556877666333 2367999995 467899999995321 11 111111 12359999999999999999999988
Q ss_pred hcCCCceEEecHHHHHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEE-eCCCCcCceE
Q 044504 98 KTTFKGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCY-TAGHVLGAAM 176 (525)
Q Consensus 98 ~~~~~~~Iy~t~~t~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~-~~gH~~gs~~ 176 (525)
++ +.+||+++.+...+. ..+.. .....+..++.+.+++++++++ .+||++|+++
T Consensus 95 ~~--~a~v~~~~~~~~~~~----------------~~~~~-------~~~~~~~~g~~l~~g~~~l~vi~tPGHT~g~~~ 149 (466)
T 3r2u_A 95 KL--NANIYVSGESDDTLG----------------YKNMP-------NHTHFVQHNDDIYVGNIKLKVLHTPGHTPESIS 149 (466)
T ss_dssp HH--CCEEEEECCSCTTTS----------------CCSCC-------TTCEEECTTCEEEETTEEEEEEECCSSSTTCEE
T ss_pred hh--CCeEEECcchhhhhc----------------cccCC-------CCCEEeCCCCEEEECCEEEEEEECCCCCCCCEE
Confidence 75 679999876422110 00000 1457788999999999999886 4799999999
Q ss_pred EEEEEC-----CEEEEEeecCCCCC
Q 044504 177 FMVDIA-----GVRVLYTGDYSREE 196 (525)
Q Consensus 177 ~~i~~~-----~~~ilytGD~~~~~ 196 (525)
|++... +.+++||||+.+..
T Consensus 150 ~~~~~~~~~~~~~~~lftGD~lf~~ 174 (466)
T 3r2u_A 150 FLLTDEGAGAQVPMGLFSGDFIFVG 174 (466)
T ss_dssp EEEECGGGTCCSCCEEEEETTBCSS
T ss_pred EEEcCCCccCCCceEEEECCcccCC
Confidence 999762 34699999997643
No 66
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.38 E-value=1.4e-13 Score=142.72 Aligned_cols=131 Identities=15% Similarity=0.135 Sum_probs=93.2
Q ss_pred CCcEEEEEECCeEEEEecCCCCCcCc-cccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHHHHH
Q 044504 36 GRSCVYMSYKGKTILFDCGIHPAYSG-MAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAI 114 (525)
Q Consensus 36 g~s~~ll~~~~~~iLiD~G~~~~~~~-~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t~~~ 114 (525)
..|||+|+. +..+|||||....... ...+.. .+++.+|++|++||.|.||+||++.|.+++. +.+||+++.+.+.
T Consensus 40 ~~n~~li~~-~~~iLID~G~~~~~~~~~~~l~~--~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~-~~~v~~~~~~~~~ 115 (414)
T 2q9u_A 40 SYNSYFIDD-ECPTVIDSVKYPFAEEWLSRIAA--CCPLDKIKYVVMNHAEGDHASSLKDHYHKFT-NATFVCTKKCQEH 115 (414)
T ss_dssp EECCEEECS-SSCEEECCCCGGGHHHHHHHHHH--HSCGGGCCEEECSCCSGGGTTTHHHHGGGST-TCEEEECHHHHHH
T ss_pred ceeEEEEEC-CCEEEEeCCCcccHHHHHHHHHH--hcCcccCCEEEeCCCCcchhcCHHHHHHHCC-CCEEEECHHHHHH
Confidence 468999985 7899999997311110 011111 1345789999999999999999999887642 6799999998775
Q ss_pred HHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeC--CCCcCceEEEEEECCEEEEEeecC
Q 044504 115 YKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTA--GHVLGAAMFMVDIAGVRVLYTGDY 192 (525)
Q Consensus 115 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~--gH~~gs~~~~i~~~~~~ilytGD~ 192 (525)
+...+ .. . ......+..++.+.+++.+++++.+ ||++|++++++ .+.+++|+||+
T Consensus 116 ~~~~~----~~---~--------------~~~~~~~~~g~~~~lg~~~~~~~~~p~gHt~~~~~~~~--~~~~~lf~GD~ 172 (414)
T 2q9u_A 116 LKILY----GM---E--------------KATWLIVDDKYTLKIGKRTLKFIPVPLLHWPDSTFTYC--PEDKILFSNDG 172 (414)
T ss_dssp HHHHH----CC---T--------------TCCEEECCTTCCEECSSCEEEEEECTTSSSTTCEEEEE--TTTTEEEEETT
T ss_pred HHHHh----CC---C--------------CCeeEEeCCCCEEEECCeEEEEEeCCCCCCCCceEEEE--CCCeEEEEccc
Confidence 54321 00 0 0245677888999999988877643 79999988765 45679999996
Q ss_pred C
Q 044504 193 S 193 (525)
Q Consensus 193 ~ 193 (525)
.
T Consensus 173 ~ 173 (414)
T 2q9u_A 173 F 173 (414)
T ss_dssp T
T ss_pred c
Confidence 4
No 67
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=99.23 E-value=2.5e-11 Score=132.51 Aligned_cols=156 Identities=12% Similarity=0.119 Sum_probs=94.7
Q ss_pred CCcEEEEEECCeEEEEecCCCCCcCccccCCCCC-CCCCCCccEEEcCCCchhHhcChHHHHhh---cCCCceEEecHHH
Q 044504 36 GRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFD-EIDPSAIDVLLITHFHLDHAASLPYFLEK---TTFKGRVFMTHAT 111 (525)
Q Consensus 36 g~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~-~~~~~~Id~IliTH~H~DH~gglp~l~~~---~~~~~~Iy~t~~t 111 (525)
..|||+|+.++..||||||...... ...+..+. .+...+|++|++||.|.||+||+..|.+. ...+.+||+++.+
T Consensus 122 ~~N~ylI~~~~g~iLIDtG~~~~~a-~~~l~~i~~~~~~~~I~~IIlTH~H~DH~GG~~~l~~~~~~~~~~a~V~a~~~~ 200 (658)
T 2cfu_A 122 LANITFIRGDSGWIVVDTLTTPATA-RAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGF 200 (658)
T ss_dssp SSCEEEEECSSSEEEECCCSSHHHH-HHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEETTH
T ss_pred CeEEEEEEECCEEEEEECCCCHHHH-HHHHHHHHhhCCCCCceEEEECCCChhhhCCHHHHHhhhhccCCCCEEEEchhH
Confidence 4699999988899999999753110 00011110 12357899999999999999999988642 0136799999987
Q ss_pred HHHHHH--------HHHHHHhhhcc--ccC-CC-----C---CCHHHHHHHhcccEEe-cCCcEEEeCCEEEEEE-eCCC
Q 044504 112 KAIYKL--------LLTDYVKVSKV--SVE-DM-----L---FDEQDINRSMDKIEVL-DFHQTVEVNGIKFWCY-TAGH 170 (525)
Q Consensus 112 ~~~~~~--------~l~d~~~~~~~--~~~-~~-----~---~~~~~~~~~~~~~~~i-~~~~~~~~~gi~v~~~-~~gH 170 (525)
.+.+.. +........+. ... .. + +..... ........+ ..++.+.++|.+++++ .+||
T Consensus 201 ~~~~~~e~~~~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~~~g~~-~~~~p~~~~~~dG~~l~lgg~~l~vi~tPGH 279 (658)
T 2cfu_A 201 MEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPL-SLLAPTRLIEGEGEDLVLDGVPFTFQNTPGT 279 (658)
T ss_dssp HHHHC---CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCC-CCCCCSEEECTTEEEEEETTEEEEEEECTTS
T ss_pred HHHHhhhhhhhhhHHHHHHHHHhccCCChhhhhhhhhcccccccCCCc-cCCCCcEEEecCceEEEECCEEEEEEeCCCC
Confidence 664311 10000000000 000 00 0 000000 000112345 4678889999988885 5898
Q ss_pred -CcCceEEEEEECCEEEEEeecCCCC
Q 044504 171 -VLGAAMFMVDIAGVRVLYTGDYSRE 195 (525)
Q Consensus 171 -~~gs~~~~i~~~~~~ilytGD~~~~ 195 (525)
++|+++|++ ++.+++|+||....
T Consensus 280 hTpg~i~~~~--p~~~vLftGD~v~~ 303 (658)
T 2cfu_A 280 ESPAEMNIWL--PRQKALLMAENVVG 303 (658)
T ss_dssp SSSSBEEEEE--TTTTEEECTTTSCS
T ss_pred CCCCcEEEEE--CCCCEEEEeccccc
Confidence 999999987 45679999998753
No 68
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=99.22 E-value=2.5e-12 Score=119.67 Aligned_cols=123 Identities=15% Similarity=0.155 Sum_probs=85.1
Q ss_pred CCccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHHHhhcCCCceEEecHHH
Q 044504 32 GNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHAT 111 (525)
Q Consensus 32 ~~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l~~~~~~~~~Iy~t~~t 111 (525)
....+.|||+|+.++..+|||||.... ..... +... .+|++|++||. ||+||++.+.+++ +.+||+++.+
T Consensus 19 ~~~~~~n~~li~~~~~~iliD~g~~~~-~~~~~---l~~~--g~i~~ii~TH~--DH~gg~~~~~~~~--~a~v~~~~~~ 88 (201)
T 2p97_A 19 ARNIDFNGFAWIRPEGNILIDPVALSN-HDWKH---LESL--GGVVWIVLTNS--DHVRSAKEIADQT--YTKIAGPVAE 88 (201)
T ss_dssp TTTEEEEEEEECCTTCCEEESCCCCCH-HHHHH---HHHT--TCCSEEECSSG--GGCTTHHHHHHHS--CCEEEEEGGG
T ss_pred CCCcceeEEEEEeCCeeEEEECCCCcH-HHHHH---HHhc--CCCCEEEECCc--hhhhhHHHHHHhc--CCEEEEcHhH
Confidence 344578999999988999999994221 11111 1112 27999999999 9999999998774 5799998876
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCCHHHHHHHhcccEEecCCcEEEeCCEEEEEEeCCCCcCceEEEEEECCEEEEEeec
Q 044504 112 KAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGD 191 (525)
Q Consensus 112 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~v~~~~~gH~~gs~~~~i~~~~~~ilytGD 191 (525)
.+.+.. .....+..++.+. .++++...+.||++|+++++++ + +++|+||
T Consensus 89 ~~~~~~---------------------------~~~~~~~~g~~~~-~~~~~~~~p~gHt~g~~~~~~~--~-~~lf~GD 137 (201)
T 2p97_A 89 KENFPI---------------------------YCDRWLSDGDELV-PGLKVMELQGSKTPGELALLLE--E-TTLITGD 137 (201)
T ss_dssp TTSCSS---------------------------CCSEEECTTCBSS-TTEEEEEECSSSSTTEEEEEET--T-TEEEECS
T ss_pred hhhhcc---------------------------cCceecCCCCEEc-ceEEEEECCCCCCCCcEEEEEc--C-CEEEECc
Confidence 432110 0023455555442 2566666556999999999875 4 8999999
Q ss_pred CCCC
Q 044504 192 YSRE 195 (525)
Q Consensus 192 ~~~~ 195 (525)
+...
T Consensus 138 ~~~~ 141 (201)
T 2p97_A 138 LVRA 141 (201)
T ss_dssp SEEB
T ss_pred cccc
Confidence 8754
No 69
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=98.65 E-value=1.4e-11 Score=133.81 Aligned_cols=155 Identities=16% Similarity=0.138 Sum_probs=92.1
Q ss_pred CcEEEEEECCeEEEEecCCCCCcCccccCCCCCC-CCCCCccEEEcCCCchhHhcChHHHHhh---cCCCceEEecHHHH
Q 044504 37 RSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDE-IDPSAIDVLLITHFHLDHAASLPYFLEK---TTFKGRVFMTHATK 112 (525)
Q Consensus 37 ~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~-~~~~~Id~IliTH~H~DH~gglp~l~~~---~~~~~~Iy~t~~t~ 112 (525)
.|||+|+.++..+|||||...... ...+..+.. +...+|++|++||.|.||+||+..|.+. ...+++||+++.+.
T Consensus 133 ~N~~lI~~~~~~iLIDtG~~~~~a-~~~l~~i~~~~~~~~I~~IilTH~H~DH~gG~~~l~~~~~~~~~~a~I~a~~~~~ 211 (668)
T 2yhe_A 133 ANMTIIEGDSGLVLIDTLTTAETA-RAALDLYFQHRPKKPIVAVVYSHSHIDHFGGARGIIDEADVKAGKVKVFAPSGFM 211 (668)
Confidence 599999988899999999753211 111112222 3457899999999999999999998753 01367999998863
Q ss_pred HH--HHHHH-----HHHHhh-hcc--ccC-CCCCC-----H----HHHHHHhcccEEecCCcEEEeCCEEEEEE-eCC-C
Q 044504 113 AI--YKLLL-----TDYVKV-SKV--SVE-DMLFD-----E----QDINRSMDKIEVLDFHQTVEVNGIKFWCY-TAG-H 170 (525)
Q Consensus 113 ~~--~~~~l-----~d~~~~-~~~--~~~-~~~~~-----~----~~~~~~~~~~~~i~~~~~~~~~gi~v~~~-~~g-H 170 (525)
+. ....+ ...... .+. ... ...+. . ............++.++++.++|.+++++ .+| |
T Consensus 212 e~~~~e~~~~g~~~~~r~~~~~G~~lp~~~~~~~~~~l~~~~~~~~~~~~~~P~~~~~~dg~~l~lgg~~l~vi~tPG~H 291 (668)
T 2yhe_A 212 EHAVSENILAGTAMARRGQYQSGVMVPRGAQAQVDSGLFKTTATNATNTLVAPNVLIEKPYERHTVDGVELEFQLTLGSE 291 (668)
Confidence 31 11110 000000 000 000 00000 0 00000001112234677888899888885 567 9
Q ss_pred CcCceEEEEEECCEEEEEeecCCC
Q 044504 171 VLGAAMFMVDIAGVRVLYTGDYSR 194 (525)
Q Consensus 171 ~~gs~~~~i~~~~~~ilytGD~~~ 194 (525)
++|++++++ ++.+++|+||...
T Consensus 292 tpg~i~~~~--p~~~vLftGD~~~ 313 (668)
T 2yhe_A 292 APSDMNIYL--PQFKVLNTADNAP 313 (668)
Confidence 999999887 4567999999865
No 70
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=98.82 E-value=3.8e-09 Score=103.56 Aligned_cols=87 Identities=18% Similarity=0.190 Sum_probs=61.7
Q ss_pred CcEEEEEec--CC-----CccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHH
Q 044504 22 DQLIITPLG--AG-----NEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPY 94 (525)
Q Consensus 22 ~~m~i~~LG--~~-----~evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~ 94 (525)
+.++|+.|= .. ..-.++|++|+.++..||||||.... ....+. ..++++.+||+|++||.|.||+||++.
T Consensus 11 ~~~~it~l~dn~~~~~~~~~~~g~s~li~~~~~~iLiD~G~~~~--~~~~l~-~~g~~~~~i~~v~lTH~H~DH~ggl~~ 87 (284)
T 2p4z_A 11 GSVEVQVLIENVVFARNFVAEHGLSLLLKKGNKEIVVDTGQSEN--FIKNCG-LMGIDVGRIKKVVLTHGHYDHIGGLKG 87 (284)
T ss_dssp CCCEEEEEECSBCCSTTCCBCSSCEEEEEETTEEEEECCCSSTH--HHHHHH-HTTCCGGGCCEEECCCSCHHHHTTHHH
T ss_pred CCEEEEEEEeCCCCCcCcccCCEEEEEEEECCeEEEEeCCCCHH--HHHHHH-HcCCChhhCCEEEECCCCchhhccHHH
Confidence 456777761 11 11246899999999999999996421 011111 114567889999999999999999999
Q ss_pred HHhhcCCCceEEecHHHH
Q 044504 95 FLEKTTFKGRVFMTHATK 112 (525)
Q Consensus 95 l~~~~~~~~~Iy~t~~t~ 112 (525)
+.+.+ .+.+||+++.+.
T Consensus 88 ~~~~~-~~~~v~~~~~~~ 104 (284)
T 2p4z_A 88 LLERN-PEVKIYTHKEIL 104 (284)
T ss_dssp HHHHC-TTCEEEEEGGGG
T ss_pred HHHHc-CCCceecCHHHH
Confidence 87654 267999998764
No 71
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=98.17 E-value=3.9e-07 Score=87.73 Aligned_cols=76 Identities=26% Similarity=0.306 Sum_probs=50.5
Q ss_pred CcEEEEEecCCC------ccCCcEEEEEECCeEEEEecCCCCCcCccccCCCCCCCCCCCccEEEcCCCchhHhcChHHH
Q 044504 22 DQLIITPLGAGN------EVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYF 95 (525)
Q Consensus 22 ~~m~i~~LG~~~------evg~s~~ll~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~Id~IliTH~H~DH~gglp~l 95 (525)
..|++..|--.. .--++|++|+. +|||||... .-...+. ..++++. |+|++||.|.||+||++.+
T Consensus 11 ~~~~~~~~~~~~~~~~l~~~~G~s~lie~----iLiD~G~~~--~l~~~l~-~~gi~~~--~~IvlTH~H~DH~ggl~~l 81 (267)
T 3h3e_A 11 HHMRIHVLCDDSSQNGFESEHGFSVLVDS----VLFDTGKSD--VFLKNAR-KLGIDLP--KDVLISHGHYDHAGGLLYL 81 (267)
T ss_dssp -CEEEEEEECSCCCTTCCCCSSCEEEETT----EEECCCSSS--HHHHHHH-HTTCCCC--SEEECSCSCHHHHGGGGGC
T ss_pred ceeEEEEEecCCCCCCceeCcEeHHeeee----EEEECCCcH--HHHHHHH-HCCcCcC--CEEEECCCChhhhCCHHHh
Confidence 357777772211 11368899975 999999742 1111111 1134444 9999999999999999987
Q ss_pred HhhcCCCceEEecHHH
Q 044504 96 LEKTTFKGRVFMTHAT 111 (525)
Q Consensus 96 ~~~~~~~~~Iy~t~~t 111 (525)
.+.+||+++..
T Consensus 82 -----~~~~v~~~~~~ 92 (267)
T 3h3e_A 82 -----SGKRVWLRKEA 92 (267)
T ss_dssp -----CSCEEEEEGGG
T ss_pred -----cCCEEEECHHH
Confidence 37799998754
No 72
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=89.10 E-value=0.55 Score=44.43 Aligned_cols=58 Identities=10% Similarity=0.177 Sum_probs=45.2
Q ss_pred ccCCCHHHHHHHHHhcCCCeEEEecCCH-----hHHHHHHHHHHHHhccCCceEeeCCCCCEEEE
Q 044504 406 SAHADYAQTSTFLKELMPPNIILVHGES-----HEMGRLKTKLMTELADCNTKIITPKNCQSVEM 465 (525)
Q Consensus 406 S~Had~~~l~~~i~~~~P~~vi~vHGe~-----~~~~~l~~~l~~~~~~~~~~i~~p~~g~~~~~ 465 (525)
..|.+.+|..++++.++|+++||+|=.. .....+++.+++. +. ..++.+|+.||+++|
T Consensus 202 ~~hm~~~ea~~~~~~l~~~~vi~~H~~~~~~~~~~~~~l~~~~~~~-g~-~~~~~~~~~Ge~~~l 264 (264)
T 3rpc_A 202 SIIMGTKDIGRMVVRKPEAKIIAVHMDTVNHTATSRKDVRKFIKGN-NI-ESHVAVPEDGETITL 264 (264)
T ss_dssp CSSCCHHHHHHHHHHCTTSEEEEESCSSSTTBCSCHHHHHHHHHHT-TC-TTTEECCCTTCEEEC
T ss_pred CcccCHHHHHHHHHhCCcCeEEEEccccccccccCHHHHHHHHHHc-CC-CCcEEecCCCCEEeC
Confidence 5799999999999999999999999863 2345666666543 22 137999999999875
No 73
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=86.83 E-value=1.1 Score=44.47 Aligned_cols=65 Identities=8% Similarity=-0.003 Sum_probs=48.2
Q ss_pred ccCCCHHHHHHHHHhcCCCeEEEecCCHh-----HHHHHHHHHHHHhc--cCCceEeeCCCCCEEEEeeCcc
Q 044504 406 SAHADYAQTSTFLKELMPPNIILVHGESH-----EMGRLKTKLMTELA--DCNTKIITPKNCQSVEMYFNSE 470 (525)
Q Consensus 406 S~Had~~~l~~~i~~~~P~~vi~vHGe~~-----~~~~l~~~l~~~~~--~~~~~i~~p~~g~~~~~~~~~~ 470 (525)
+.|.+.++..++++.++|+++|++|.... ....+.+.+++.-+ ..+.++++++.|+++++...++
T Consensus 257 ~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Ge~~~l~~d~~ 328 (360)
T 2wyl_A 257 TDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKD 328 (360)
T ss_dssp CCSBCHHHHHHHHHHHTCSEEEEESTTTBGGGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEETTTTT
T ss_pred cCCCCHHHHHHHHHHhCCCEEEEEeeccccccCCCHHHHHHHHHhhhhhhcCCcceEEccCCcEEEecCCCC
Confidence 57999999999999999999999997542 13456666653211 0135799999999999965544
No 74
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=86.77 E-value=0.75 Score=46.12 Aligned_cols=63 Identities=5% Similarity=-0.089 Sum_probs=47.0
Q ss_pred ccCCCHHHHHHHHHhcCCCeEEEecCCHh-----HHHHHHHHHHHH---hccCCceEeeCCCCCEEEEeeCc
Q 044504 406 SAHADYAQTSTFLKELMPPNIILVHGESH-----EMGRLKTKLMTE---LADCNTKIITPKNCQSVEMYFNS 469 (525)
Q Consensus 406 S~Had~~~l~~~i~~~~P~~vi~vHGe~~-----~~~~l~~~l~~~---~~~~~~~i~~p~~g~~~~~~~~~ 469 (525)
..|.+.++..++++.++|+++||+|.... ....+++.+++. .+. +.++++++.|+++++...+
T Consensus 282 ~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~~~~~~~-~~~~~~~~~G~~~~l~~d~ 352 (379)
T 3bv6_A 282 TDKMTSSDVLRAAESLDCQVVVPFHHDIWANFQNDPREIEVLWNMKKDRLQY-QFAPFFWQVGGKYTYPTDK 352 (379)
T ss_dssp CCSBCHHHHHHHHHHHTCSEEEEESTTSBGGGCCCTHHHHHHHHHHTTTTTC-CCEECBCCTTCEEEETTTT
T ss_pred cccCCHHHHHHHHHHcCCCEEEEEeecccccccCCHHHHHHHHHhhhhhhcC-CCceEEccCCcEEEecCCC
Confidence 56999999999999999999999996542 234566655532 111 3479999999999996444
No 75
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=83.48 E-value=1.4 Score=41.47 Aligned_cols=56 Identities=13% Similarity=0.137 Sum_probs=42.7
Q ss_pred ccCCCHHHHHHHHHhcCCCeEEEecCCHh-HHHHHHHHHHHHhccCCceEeeCCCCCEEE
Q 044504 406 SAHADYAQTSTFLKELMPPNIILVHGESH-EMGRLKTKLMTELADCNTKIITPKNCQSVE 464 (525)
Q Consensus 406 S~Had~~~l~~~i~~~~P~~vi~vHGe~~-~~~~l~~~l~~~~~~~~~~i~~p~~g~~~~ 464 (525)
.+|.+.++..++++.++|++++|+|-... ....+.+.+++.++ .++.+++.|++++
T Consensus 211 ~~H~~~~~a~~~~~~~~~~~lil~H~~~~~~~~~~~~~~~~~~~---~~v~~a~dg~~~~ 267 (268)
T 1zkp_A 211 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFS---GHITLAHSGYVWN 267 (268)
T ss_dssp GTCCBHHHHHHHHHHTTCSEEEEESBCSSSCTHHHHHHHHTTCC---SEEEECCTTCEEE
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEECCCCCCChHHHHHHHHHhCC---CCEEEEeCCcccc
Confidence 45999999999999999999999996653 23345555555443 3799999998874
No 76
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=81.38 E-value=2.9 Score=39.29 Aligned_cols=59 Identities=19% Similarity=0.230 Sum_probs=44.8
Q ss_pred cccCCCHHHHHHHHHhcCCCeEEEecCCHhH---HHHHHHHHHHHhccCCceEeeCCCCCEEEE
Q 044504 405 FSAHADYAQTSTFLKELMPPNIILVHGESHE---MGRLKTKLMTELADCNTKIITPKNCQSVEM 465 (525)
Q Consensus 405 ~S~Had~~~l~~~i~~~~P~~vi~vHGe~~~---~~~l~~~l~~~~~~~~~~i~~p~~g~~~~~ 465 (525)
-.+|.+.++..++++.+++++++++|=..+. ...+.+.+++.+. +.++.+++.|++++|
T Consensus 219 ~~~H~t~~~a~~~~~~~~~~~lvl~H~~~~~~~~~~~~~~~~~~~~~--~~~v~~a~~G~~~~~ 280 (280)
T 2e7y_A 219 YKNHAAIDEVMESVKAAGVKKVILYHISTRYIRQLKSVIKKYREEMP--DVEILYMDPRKVFEM 280 (280)
T ss_dssp --CCCBHHHHHHHHHHHTCCEEEEESCCGGGHHHHHHHHHHHHHHCT--TSEEEECCTTSCEEC
T ss_pred hcCCCCHHHHHHHHHHcCCCEEEEEeecCcCcchHHHHHHHHHHhCC--CceEEEeCCCceeeC
Confidence 3579999999999999999999999988754 2344444554443 458999999998864
No 77
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=75.73 E-value=4.5 Score=38.98 Aligned_cols=59 Identities=15% Similarity=0.093 Sum_probs=46.2
Q ss_pred cccCCCHHHHHHHHHhcCCCeEEEecCCHhH----HHHHHHHHHHHhccCCceEeeCCCCCEEEEee
Q 044504 405 FSAHADYAQTSTFLKELMPPNIILVHGESHE----MGRLKTKLMTELADCNTKIITPKNCQSVEMYF 467 (525)
Q Consensus 405 ~S~Had~~~l~~~i~~~~P~~vi~vHGe~~~----~~~l~~~l~~~~~~~~~~i~~p~~g~~~~~~~ 467 (525)
-.+|.+.++..++++.++|+++|++|=..+. ...+.+.+++.+. ++.+++.|+++++..
T Consensus 244 ~~~H~t~~~a~~~a~~~~~~~lil~H~s~~~~~~~~~~~~~e~~~~~~----~~~~a~dg~~~~l~~ 306 (320)
T 1y44_A 244 DYYHSTTEQAAVTAKEARAKQLILTHISARYQGDASLELQKEAVDVFP----NSVAAYDFLEVNVPR 306 (320)
T ss_dssp HTTCCBHHHHHHHHHHHTCSEEEEECBCTTSCTTHHHHHHHHHHHHCS----SEEECCTTCEEECCC
T ss_pred hcCCCCHHHHHHHHHHcCCCEEEEEeEcCCCCCcchHHHHHHHHHhCC----CcEeccCCCEEEecc
Confidence 3679999999999999999999999976632 3445555555442 589999999999854
No 78
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=69.66 E-value=5.6 Score=37.93 Aligned_cols=56 Identities=14% Similarity=0.127 Sum_probs=42.6
Q ss_pred ccCCCHHHHHHHHHhcCCCeEEEecCCHhHH----HHHHHHHHHHhccCCceEeeCCCCCEEEE
Q 044504 406 SAHADYAQTSTFLKELMPPNIILVHGESHEM----GRLKTKLMTELADCNTKIITPKNCQSVEM 465 (525)
Q Consensus 406 S~Had~~~l~~~i~~~~P~~vi~vHGe~~~~----~~l~~~l~~~~~~~~~~i~~p~~g~~~~~ 465 (525)
.+|.+.++..++.+.++++++|++|=..+.- ..+.+.+++.+ .++.+++.|.+++|
T Consensus 247 ~~H~t~~~a~~~a~~~~~~~lvl~H~s~~~~~~~~~~~~~e~~~~~----~~~~~a~Dg~~~~~ 306 (306)
T 2cbn_A 247 RGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIF----PATELANDFTVFNV 306 (306)
T ss_dssp TTCCBHHHHHHHHHHHTCSEEEEECBCTTCCHHHHHHHHHHHHTTC----SCEEECCTTCEEEC
T ss_pred cCCCCHHHHHHHHHHcCCcEEEEEeecCCCCCCchhHHHHHHHHhC----CCcEEcccccEeeC
Confidence 5799999999999999999999999776532 23344444333 25899999998864
No 79
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=63.23 E-value=7.4 Score=38.57 Aligned_cols=62 Identities=15% Similarity=0.177 Sum_probs=40.8
Q ss_pred ccCCCHHHHHHHHHhcCCCeEEEecCCHhHH-------------HHHHHHHHHHhccCCceEeeCCCCCEEEEeeCc
Q 044504 406 SAHADYAQTSTFLKELMPPNIILVHGESHEM-------------GRLKTKLMTELADCNTKIITPKNCQSVEMYFNS 469 (525)
Q Consensus 406 S~Had~~~l~~~i~~~~P~~vi~vHGe~~~~-------------~~l~~~l~~~~~~~~~~i~~p~~g~~~~~~~~~ 469 (525)
.+|...++..++.+..++++++|+|=..+.. ..|.+.+++.|. +.++++.+.|+++++....
T Consensus 287 ~~H~t~~~A~~~a~~~~~k~lil~H~s~ry~~~~~~~~~~~~~~~~~~~ea~~~f~--~~~~~~a~dg~~~~i~~~~ 361 (368)
T 3zwf_A 287 HGHSTPQMAATFAKLCRAKRLVLTHFSQRYKPVALAREGETDGIAELKKQAESVLD--LQEVTLAEDFMVISIPIKK 361 (368)
T ss_dssp TTCCCHHHHHHHHHHTTCSEEEEECBCCCC-----------------------------CEEEECCTTCEEECCC--
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEEeeCcccCccccccccccchHHHHHHHHHHhcC--CCceEEecCCcEEEeecCc
Confidence 5799999999999999999999999766543 345555555442 2379999999999996543
No 80
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=59.73 E-value=11 Score=35.87 Aligned_cols=56 Identities=16% Similarity=0.205 Sum_probs=42.9
Q ss_pred cccCCCHHHHHHHHHhcCCCeEEEecCCHhHHHHHHHHHHHHhccCCceEeeCCCCCEEEEe
Q 044504 405 FSAHADYAQTSTFLKELMPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSVEMY 466 (525)
Q Consensus 405 ~S~Had~~~l~~~i~~~~P~~vi~vHGe~~~~~~l~~~l~~~~~~~~~~i~~p~~g~~~~~~ 466 (525)
...|.+.++..++++.++|++++++|=....- . +.+.+.+. .++.+.+.|.+++|.
T Consensus 237 ~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~--~-~~~~~~~~---~~v~~a~DG~~i~l~ 292 (293)
T 3md7_A 237 HPSHFSLGEALEWIEKLSPKRAILTHMHVPLD--Y-ETVMRETP---HHVEPGYDGLRFEVA 292 (293)
T ss_dssp BTTBCCHHHHHHHHHHHCCSEEEEESBCTTCC--H-HHHHHHSC---TTEEECCTTCEEEEC
T ss_pred CCCCCCHHHHHHHHHHcCCCEEEEECCCCCCC--H-HHHHhhcC---CCcEEeeCCcEEEec
Confidence 46799999999999999999999999776531 1 22333332 369999999999873
No 81
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=51.77 E-value=14 Score=34.86 Aligned_cols=50 Identities=16% Similarity=0.100 Sum_probs=38.0
Q ss_pred CHHHHHHHHHhcCCCeEEEecCCHhHHHHHHHHHHHHhccCCceEeeCCCCCEEEE
Q 044504 410 DYAQTSTFLKELMPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSVEM 465 (525)
Q Consensus 410 d~~~l~~~i~~~~P~~vi~vHGe~~~~~~l~~~l~~~~~~~~~~i~~p~~g~~~~~ 465 (525)
..++..++++.++|++++|.|.....- .+.+++.++. ++.....|.++++
T Consensus 235 ~~~~a~~~~~~~~~~~l~l~H~~~~~~---~~~~~~~~~~---~v~~a~~G~~i~l 284 (284)
T 2p4z_A 235 KVKDIARKIEEYGVKKVLTGHCTGIDE---YGFLKSVLKD---KISYLTTSSSIVV 284 (284)
T ss_dssp HHHHHHHHHHHTTBCCEEECGGGCHHH---HHHHHHHHGG---GEEECCTTCEEEC
T ss_pred HHHHHHHHHHcCCCCEEEeeCcCcHHH---HHHHHHHhCC---CEEEcCCCcEEeC
Confidence 678888999999999999999988543 2345556643 6777888888764
No 82
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=47.21 E-value=33 Score=32.19 Aligned_cols=93 Identities=17% Similarity=0.148 Sum_probs=54.5
Q ss_pred CCCcEEecccCCCCChhHHhhcCCceeEeecCeeeeeeEEEEEeecccCCCH---HHHHHHHHhcCCCeEEEecCCHhHH
Q 044504 360 KKNACVIPGYVVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYISFSAHADY---AQTSTFLKELMPPNIILVHGESHEM 436 (525)
Q Consensus 360 ~~n~ii~~gy~~~gt~~~~l~~~~~~~~~~~g~~i~~~~~v~~i~~S~Had~---~~l~~~i~~~~P~~vi~vHGe~~~~ 436 (525)
++-.|+|+|=+=+|-. .+++..++ ..| -++.+=|=.+|+.. ++. ++..++++.++|++++|.|-....
T Consensus 171 ~~GlvvitGCsH~GI~--Niv~~a~~---~~g--~~i~~viGGfHL~~-~~~~~l~~tl~~l~~~~~~~i~~~HCTg~~- 241 (267)
T 3h3e_A 171 KEGLVVITGCSHRGID--NILLDIAE---TFN--ERIKMVVGGFHLLK-SSDDEIEKIVKAFNELGVETVVPCHCTGER- 241 (267)
T ss_dssp TTEEEEEESCCTTCHH--HHHHHHHT---TCS--SCEEEEEEECCCTT-SCHHHHHHHHHHHHHTTCCEEEEETTSCHH-
T ss_pred CCcEEEEeCCCCcCHH--HHHHHHHH---HhC--CCceEEEeccccCC-CCHHHHHHHHHHHHhcCCCEEEEECCCCHH-
Confidence 3445677776555532 12221111 123 22334444566654 344 455667777899999999988654
Q ss_pred HHHHHHHHHHhccCCceEeeCCCCCEEEEe
Q 044504 437 GRLKTKLMTELADCNTKIITPKNCQSVEMY 466 (525)
Q Consensus 437 ~~l~~~l~~~~~~~~~~i~~p~~g~~~~~~ 466 (525)
....++++++ .++.....|.++++.
T Consensus 242 --a~~~L~~~lp---~~v~~~~~G~~iei~ 266 (267)
T 3h3e_A 242 --AVDIFKREFL---GKIMDCYAGLKLEVS 266 (267)
T ss_dssp --HHHHHHHHCS---SEECCCCTTCEEEEC
T ss_pred --HHHHHHHHCC---CCEEEecCceEEEeC
Confidence 2344566664 378888899999874
No 83
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=39.67 E-value=23 Score=32.76 Aligned_cols=55 Identities=13% Similarity=0.123 Sum_probs=40.4
Q ss_pred ccCCCHHHHHHHHHhcCCCeEEEecCCHhHHHHHHHHHHHHhccCCceEeeCCCCCEEEEe
Q 044504 406 SAHADYAQTSTFLKELMPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSVEMY 466 (525)
Q Consensus 406 S~Had~~~l~~~i~~~~P~~vi~vHGe~~~~~~l~~~l~~~~~~~~~~i~~p~~g~~~~~~ 466 (525)
.+|.+.++..++++.++|++++++|=..+.-.. .+++.+ ..++.....|.++++.
T Consensus 198 ~~H~~~~~a~~~~~~~~~k~lil~H~s~~~~~~---~~~~~~---~~~v~~a~Dg~~~~~~ 252 (258)
T 3g1p_A 198 RNHCDLNTVLALNQVIRSPRVILTHISHQFDAW---LMENAL---PSGFEVGFDGMEIGVA 252 (258)
T ss_dssp SSSCBHHHHHHHHHHHCCSCEEEESCCHHHHHH---HTTCCC---CTTEEECCTTEEEC--
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEECccCccchh---hhhhhC---CCCeEEccCCCEEeee
Confidence 579999999999999999999999988765321 122222 2368888999888764
No 84
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=38.56 E-value=16 Score=33.42 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=33.2
Q ss_pred ecccCCCHHHHHHHHHhcCCCeEEEecCCHhHHHHHHHHHH
Q 044504 404 SFSAHADYAQTSTFLKELMPPNIILVHGESHEMGRLKTKLM 444 (525)
Q Consensus 404 ~~S~Had~~~l~~~i~~~~P~~vi~vHGe~~~~~~l~~~l~ 444 (525)
.-..|.+.++..++++.++|+.+||+|=.....+.|++.++
T Consensus 183 ~~~~h~~~~ea~~~~~~l~~k~vip~H~~~~~~~~~~~~l~ 223 (235)
T 3kl7_A 183 NQPYTMTVSQAAKAARMFSPKILYPYHYGDTKIGELKDALK 223 (235)
T ss_dssp CTTTSCCHHHHHHHHHHHCCSEEEEESCTTCCTTHHHHHTT
T ss_pred CCCcccCHHHHHHHHHHcCCCEEEEEcCCCCCHHHHHHHHh
Confidence 34579999999999999999999999977655556666554
No 85
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=38.00 E-value=31 Score=28.89 Aligned_cols=63 Identities=10% Similarity=0.153 Sum_probs=41.2
Q ss_pred CCCcEEEEcCCCCCCCCCChhHH-----HHHHHHHHHHHHhcCCeEEEcccchhhHHHHHHHHHHHHh
Q 044504 208 FSPDICIIESTYGVQLHQPRNIR-----EKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWS 270 (525)
Q Consensus 208 ~~~D~LI~Esty~~~~~~~~~~~-----~~~l~~~i~~~~~~~g~vlip~fa~gr~qell~~l~~~~~ 270 (525)
...|+++++..+........... ...+.+.+.+.++.||.+++..+......+++..+.++|+
T Consensus 87 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~ 154 (180)
T 1ej0_A 87 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSLFT 154 (180)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHHEE
T ss_pred CceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHhhh
Confidence 46899998765433222111111 1456666777788999999988887777777777776654
No 86
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=35.33 E-value=85 Score=29.49 Aligned_cols=64 Identities=14% Similarity=0.164 Sum_probs=43.9
Q ss_pred CCCCcEEEEcCCCCCCCCCChh-HHHHHHHHHHHHHHhcC-CeEEEcccc--hhhHHHHHHHHHHHHhc
Q 044504 207 QFSPDICIIESTYGVQLHQPRN-IREKRFTDVIHSTISQG-GRVLIPAFA--LGRAQELLLILDEYWSN 271 (525)
Q Consensus 207 ~~~~D~LI~Esty~~~~~~~~~-~~~~~l~~~i~~~~~~~-g~vlip~fa--~gr~qell~~l~~~~~~ 271 (525)
...+|++++|-... .-+...+ .+.-.+.+.+.++++.| |..++=+|. -.-.++++..+...+..
T Consensus 138 ~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~F~~ 205 (277)
T 3evf_A 138 PVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRRFGG 205 (277)
T ss_dssp CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCC
T ss_pred CCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHhcCC
Confidence 45789999985443 2221111 12224577788889999 999999998 56677888888887753
No 87
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=31.73 E-value=77 Score=29.86 Aligned_cols=65 Identities=12% Similarity=0.033 Sum_probs=44.9
Q ss_pred CCCCCcEEEEcCCCCCCCCCCh-hHHHHHHHHHHHHHHhcC--CeEEEcccc--hhhHHHHHHHHHHHHhc
Q 044504 206 PQFSPDICIIESTYGVQLHQPR-NIREKRFTDVIHSTISQG--GRVLIPAFA--LGRAQELLLILDEYWSN 271 (525)
Q Consensus 206 ~~~~~D~LI~Esty~~~~~~~~-~~~~~~l~~~i~~~~~~~--g~vlip~fa--~gr~qell~~l~~~~~~ 271 (525)
+...+|++++|-.-. .-.... ..+.-.+.+...++++.| |..++=+|. -.-.++++..+...|..
T Consensus 153 ~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~lk~~F~~ 222 (282)
T 3gcz_A 153 EVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSRLQLKHGG 222 (282)
T ss_dssp CCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHHHHHHHCC
T ss_pred CCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHHHHHhcCC
Confidence 356799999986554 221111 122235677778888888 999999998 56677888888887753
No 88
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=31.40 E-value=45 Score=29.98 Aligned_cols=29 Identities=14% Similarity=0.067 Sum_probs=26.1
Q ss_pred ccCCCHHHHHHHHHhcCCCeEEEecCCHh
Q 044504 406 SAHADYAQTSTFLKELMPPNIILVHGESH 434 (525)
Q Consensus 406 S~Had~~~l~~~i~~~~P~~vi~vHGe~~ 434 (525)
..|.+.++..++++.++|++++|+|=...
T Consensus 149 ~~h~~~~~a~~~~~~~~~k~vi~~H~~~~ 177 (220)
T 1vjn_A 149 TYTIGPKEAKEVADLLNAKVIIPMHYKTK 177 (220)
T ss_dssp SSSCCHHHHHHHHHHTTCSEEEEESCCCS
T ss_pred cCcCCHHHHHHHHHhcCCCEEEEEecccc
Confidence 46999999999999999999999997654
No 89
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=27.57 E-value=22 Score=34.30 Aligned_cols=59 Identities=14% Similarity=0.108 Sum_probs=40.6
Q ss_pred ccCCCHH---HHHHHHHhcCCCeEEEecCCHhH--HHHHHHHHHHHhccCCceEeeCCCCCEEEEee
Q 044504 406 SAHADYA---QTSTFLKELMPPNIILVHGESHE--MGRLKTKLMTELADCNTKIITPKNCQSVEMYF 467 (525)
Q Consensus 406 S~Had~~---~l~~~i~~~~P~~vi~vHGe~~~--~~~l~~~l~~~~~~~~~~i~~p~~g~~~~~~~ 467 (525)
-+|.+.+ +..++++.++|++++++|=.... +....+..++.+. .++.+...|.++++-.
T Consensus 244 ~gH~s~~~~~eA~~~a~~~~~k~lvLtH~s~~np~l~~~~~e~~~~~~---~~v~~A~DGm~i~~~~ 307 (321)
T 3jxp_A 244 MGHLAQNGPGGTLEVLDGFPRQRKVLIHINNTNPILDENSPERAEVLR---RGVEVAFDGMSIELLE 307 (321)
T ss_dssp CCCCCSSSTTCHHHHHTTCSSSEEEEESBCTTCGGGSTTCHHHHHHHH---TTEEECCTTCEEEEC-
T ss_pred CcccCCCCHHHHHHHHHhCCCCeEEEEEeCCCCcccccchHHHHHhhc---CCcEEecCCcEEEehh
Confidence 4688888 99999999999999999976543 2211111222222 2688899999998854
No 90
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=25.91 E-value=53 Score=28.29 Aligned_cols=62 Identities=15% Similarity=0.154 Sum_probs=38.5
Q ss_pred CCcEEEEcCCCCCCCCCChhH-----HHHHHHHHHHHHHhcCCeEEEcccchhhHHHHHHHHHHHHh
Q 044504 209 SPDICIIESTYGVQLHQPRNI-----REKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWS 270 (525)
Q Consensus 209 ~~D~LI~Esty~~~~~~~~~~-----~~~~l~~~i~~~~~~~g~vlip~fa~gr~qell~~l~~~~~ 270 (525)
.+|+++++.......+..... ....+.+.+.+.++.||.+++..+......+++..+...+.
T Consensus 97 ~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~f~ 163 (196)
T 2nyu_A 97 RADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQ 163 (196)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHHEE
T ss_pred CCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHHhc
Confidence 689999865332221211111 11355566677788999999988876667777777766543
No 91
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=25.76 E-value=37 Score=29.78 Aligned_cols=61 Identities=16% Similarity=0.259 Sum_probs=38.5
Q ss_pred CCcEEEEcCCCCCCCCCChh-----HHHHHHHHHHHHHHhcCCeEEEcccchhhHHHHHHHHHHHH
Q 044504 209 SPDICIIESTYGVQLHQPRN-----IREKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYW 269 (525)
Q Consensus 209 ~~D~LI~Esty~~~~~~~~~-----~~~~~l~~~i~~~~~~~g~vlip~fa~gr~qell~~l~~~~ 269 (525)
.+|+++++............ ...+...+...+.++.||+.++-+|.-...++++..+...+
T Consensus 91 ~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~F 156 (191)
T 3dou_A 91 KVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKNF 156 (191)
T ss_dssp SEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGGE
T ss_pred cceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHhc
Confidence 68999997643222111111 11234445556777899999999998777778777776543
No 92
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=25.66 E-value=1.7e+02 Score=24.57 Aligned_cols=57 Identities=9% Similarity=0.079 Sum_probs=39.2
Q ss_pred CCcEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHhcCCeEEEcccchhhHHHHHHHHHHHHh
Q 044504 209 SPDICIIESTYGVQLHQPRNIREKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWS 270 (525)
Q Consensus 209 ~~D~LI~Esty~~~~~~~~~~~~~~l~~~i~~~~~~~g~vlip~fa~gr~qell~~l~~~~~ 270 (525)
..|++++...|. .. ......+.+.+.+.++.||.+++-.+......++...+.+.+.
T Consensus 119 ~~D~v~~~~~~~----~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~ 175 (194)
T 1dus_A 119 KYNKIITNPPIR----AG-KEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFG 175 (194)
T ss_dssp CEEEEEECCCST----TC-HHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHS
T ss_pred CceEEEECCCcc----cc-hhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhc
Confidence 689999865442 11 2334566677788889999999988876666667777776653
No 93
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=23.64 E-value=1.7e+02 Score=27.19 Aligned_cols=78 Identities=13% Similarity=0.166 Sum_probs=43.5
Q ss_pred CCCCcEEEEcCCCCCCCCCChhHHHH--HHHHHHHHHHhcCC-eEEEcccchhhHHHH---HHHHHHHHhcC---CCC--
Q 044504 207 QFSPDICIIESTYGVQLHQPRNIREK--RFTDVIHSTISQGG-RVLIPAFALGRAQEL---LLILDEYWSNH---PEF-- 275 (525)
Q Consensus 207 ~~~~D~LI~Esty~~~~~~~~~~~~~--~l~~~i~~~~~~~g-~vlip~fa~gr~qel---l~~l~~~~~~~---~~~-- 275 (525)
...+|++++|-.-. ..+. ..+..+ ...+...+.++.|| ..++=+|. |-..++ +..+...|... +..
T Consensus 137 ~~~~DvVLSDMAPn-SG~~-~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq-g~~~~~~~~l~~lk~~F~~vkvk~paSR 213 (269)
T 2px2_A 137 SEISDTLLCDIGES-SPSA-EIEEQRTLRILEMVSDWLSRGPKEFCIKILC-PYMPKVIEKLESLQRRFGGGLVRVPLSR 213 (269)
T ss_dssp CCCCSEEEECCCCC-CSCH-HHHHHHHHHHHHHHHHHHTTCCSEEEEEESC-TTSHHHHHHHHHHHHHHCCEEECCTTSC
T ss_pred CCCCCEEEeCCCCC-CCcc-HHHHHHHHHHHHHHHHHhhcCCcEEEEEECC-CCchHHHHHHHHHHHHcCCEEEECCCCC
Confidence 34689999986543 2221 112221 23456667788899 99999998 544444 44555554321 111
Q ss_pred -CCCCEEEEChhH
Q 044504 276 -HNIPIYYASPLA 287 (525)
Q Consensus 276 -~~~pI~~~s~~a 287 (525)
...-+|+.+...
T Consensus 214 ~~S~E~YlVa~~~ 226 (269)
T 2px2_A 214 NSNHEMYWVSGAS 226 (269)
T ss_dssp TTCCCEEEETTCC
T ss_pred CCCccEEEEeccc
Confidence 234577765444
No 94
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=23.38 E-value=1.3e+02 Score=26.22 Aligned_cols=49 Identities=16% Similarity=0.194 Sum_probs=37.4
Q ss_pred CCcEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHhcCCeEEEcccchhhHHHHHHHHHHH
Q 044504 209 SPDICIIESTYGVQLHQPRNIREKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEY 268 (525)
Q Consensus 209 ~~D~LI~Esty~~~~~~~~~~~~~~l~~~i~~~~~~~g~vlip~fa~gr~qell~~l~~~ 268 (525)
.+|++++.... . .. +.+.+.+.++.||.+++.+.......+++..+.+.
T Consensus 122 ~~D~v~~~~~~---------~-~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 122 LPEAVFIGGGG---------S-QA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARH 170 (204)
T ss_dssp CCSEEEECSCC---------C-HH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHH
T ss_pred CCCEEEECCcc---------c-HH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhC
Confidence 68999976522 1 22 67777888899999999988888888888777764
No 95
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=23.15 E-value=1.5e+02 Score=28.14 Aligned_cols=64 Identities=9% Similarity=-0.045 Sum_probs=43.3
Q ss_pred CCCCcEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHhcC-CeEEEcccc--hhhHHHHHHHHHHHHh
Q 044504 207 QFSPDICIIESTYGVQLHQPRNIREKRFTDVIHSTISQG-GRVLIPAFA--LGRAQELLLILDEYWS 270 (525)
Q Consensus 207 ~~~~D~LI~Esty~~~~~~~~~~~~~~l~~~i~~~~~~~-g~vlip~fa--~gr~qell~~l~~~~~ 270 (525)
...+|++++|-.-....+.....+...|.+...++++.| |..++=+|. -.-..+++..+...+.
T Consensus 145 ~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~F~ 211 (300)
T 3eld_A 145 TEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRFG 211 (300)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHHHC
T ss_pred CCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHhCC
Confidence 457899999864441111111122345677778888999 999999998 6667788877777765
No 96
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=23.08 E-value=63 Score=32.08 Aligned_cols=56 Identities=13% Similarity=0.198 Sum_probs=37.4
Q ss_pred eecccCCCHHHHHHHHHhc-CCCeEEEecCCHhHHHHHHHHHHHHhccCCceEeeCCC
Q 044504 403 ISFSAHADYAQTSTFLKEL-MPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKN 459 (525)
Q Consensus 403 i~~S~Had~~~l~~~i~~~-~P~~vi~vHGe~~~~~~l~~~l~~~~~~~~~~i~~p~~ 459 (525)
+-+.+|.+.+.+.++++.+ .|++++.||=+.++-..+.+.+.+.... -.+|+++.+
T Consensus 88 flil~h~d~~~l~rll~~ly~p~n~y~IHvD~ks~~~~~~~~~~~~~~-f~NV~v~~~ 144 (391)
T 2gak_A 88 YSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQGIASC-FDNVFVASQ 144 (391)
T ss_dssp EEEEECSCHHHHHHHHHHHCCTTSEEEEEECTTSCHHHHHHHHHHHHT-CTTEEECSS
T ss_pred EEEEecCCHHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHHHHHhc-CCCEEEecc
Confidence 3456799999999999987 8999999999877544444443221111 125776543
No 97
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=20.59 E-value=34 Score=29.77 Aligned_cols=60 Identities=13% Similarity=0.139 Sum_probs=35.8
Q ss_pred CCCcEEEEcCCCCCCCCCChhHH------HHHHHHHHHHHHhcCCeEEEcccchhhHHHHHHHHHHH
Q 044504 208 FSPDICIIESTYGVQLHQPRNIR------EKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEY 268 (525)
Q Consensus 208 ~~~D~LI~Esty~~~~~~~~~~~------~~~l~~~i~~~~~~~g~vlip~fa~gr~qell~~l~~~ 268 (525)
..+|+++++........ ...+. ...+.+.+.+.++.||.+++.++......+++..+...
T Consensus 105 ~~fD~v~~~~~~~~~g~-~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~ 170 (201)
T 2plw_A 105 KKIDIILSDAAVPCIGN-KIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGM 170 (201)
T ss_dssp CCEEEEEECCCCCCCSC-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTT
T ss_pred CcccEEEeCCCcCCCCC-cccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 46899998654321110 00111 12345556677889999999887766667776666543
No 98
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=20.46 E-value=1.7e+02 Score=26.98 Aligned_cols=55 Identities=5% Similarity=0.051 Sum_probs=31.4
Q ss_pred CCCCcEEEEcCCCCCCCCCChh-HHHHHHHHHHHHHHhcCC--eEEEcccchhhHHHHHH
Q 044504 207 QFSPDICIIESTYGVQLHQPRN-IREKRFTDVIHSTISQGG--RVLIPAFALGRAQELLL 263 (525)
Q Consensus 207 ~~~~D~LI~Esty~~~~~~~~~-~~~~~l~~~i~~~~~~~g--~vlip~fa~gr~qell~ 263 (525)
...+|+++++..+. ..+...+ .+...+.+.+.++++.|| ..++-+|. ....+++.
T Consensus 138 ~~~fD~V~sd~~~~-~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~-~~~~~~~~ 195 (265)
T 2oxt_A 138 VERTDVIMCDVGES-SPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC-PYSVEVME 195 (265)
T ss_dssp CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC-TTSHHHHH
T ss_pred CCCCcEEEEeCccc-CCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC-CCChhHHH
Confidence 34689999975511 1111111 111125567778889999 99988887 44343333
No 99
>4h4n_A Hypothetical protein BA_2335; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.10A {Bacillus anthracis}
Probab=20.36 E-value=74 Score=21.76 Aligned_cols=24 Identities=25% Similarity=0.243 Sum_probs=18.5
Q ss_pred CCCCcEEEEEecCCCccCCcEEEE
Q 044504 19 REGDQLIITPLGAGNEVGRSCVYM 42 (525)
Q Consensus 19 ~~~~~m~i~~LG~~~evg~s~~ll 42 (525)
+++.+++++|+|-..|+-.|.-+|
T Consensus 14 ppnsklkvtffgp~nevitnvsii 37 (67)
T 4h4n_A 14 PPNSKLKVTFFGPYNEVITNVSII 37 (67)
T ss_dssp CTTEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCCeeEEEEecchhhhhhhHHHH
Confidence 457789999999999876555554
No 100
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=20.25 E-value=1.7e+02 Score=25.18 Aligned_cols=51 Identities=18% Similarity=0.326 Sum_probs=36.2
Q ss_pred CCCcEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHhcCCeEEEcccchhhHHHHHHHHHH
Q 044504 208 FSPDICIIESTYGVQLHQPRNIREKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDE 267 (525)
Q Consensus 208 ~~~D~LI~Esty~~~~~~~~~~~~~~l~~~i~~~~~~~g~vlip~fa~gr~qell~~l~~ 267 (525)
..+|++++..... ....+.+.+.+.++.||.+++-........++...+.+
T Consensus 107 ~~~D~i~~~~~~~---------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~ 157 (204)
T 3e05_A 107 PDPDRVFIGGSGG---------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLED 157 (204)
T ss_dssp CCCSEEEESCCTT---------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCc---------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHH
Confidence 3589999865443 12356677778889999999987777666676666654
Done!