Query 044507
Match_columns 157
No_of_seqs 134 out of 1481
Neff 10.8
Searched_HMMs 46136
Date Fri Mar 29 03:53:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044507.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044507hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4178 Soluble epoxide hydrol 99.9 1.3E-26 2.8E-31 160.0 15.4 153 1-157 19-173 (322)
2 PRK00870 haloalkane dehalogena 99.9 8.3E-25 1.8E-29 154.6 17.0 126 3-130 18-150 (302)
3 PLN02824 hydrolase, alpha/beta 99.9 1.2E-24 2.6E-29 153.3 16.3 125 3-130 7-137 (294)
4 PRK03592 haloalkane dehalogena 99.9 3E-24 6.6E-29 151.3 17.1 122 4-130 7-128 (295)
5 TIGR02240 PHA_depoly_arom poly 99.9 1.6E-23 3.4E-28 146.4 13.9 122 5-131 3-127 (276)
6 PRK03204 haloalkane dehalogena 99.9 1E-22 2.3E-27 143.0 15.6 124 3-130 13-136 (286)
7 TIGR03343 biphenyl_bphD 2-hydr 99.9 4.6E-22 1E-26 139.1 14.8 122 5-129 6-135 (282)
8 PLN02679 hydrolase, alpha/beta 99.9 6.2E-22 1.3E-26 143.1 15.6 120 7-130 64-191 (360)
9 PLN02578 hydrolase 99.9 9.6E-22 2.1E-26 141.9 16.3 118 7-129 69-186 (354)
10 TIGR03056 bchO_mg_che_rel puta 99.9 1.2E-21 2.6E-26 136.4 15.4 123 5-131 7-131 (278)
11 PRK10749 lysophospholipase L2; 99.9 2.7E-21 5.8E-26 138.4 15.9 127 5-131 32-167 (330)
12 PLN02211 methyl indole-3-aceta 99.9 2.1E-21 4.5E-26 135.5 13.8 120 10-131 3-123 (273)
13 PLN02298 hydrolase, alpha/beta 99.9 5.3E-21 1.1E-25 136.8 14.8 124 7-131 36-170 (330)
14 PLN02385 hydrolase; alpha/beta 99.9 3.6E-21 7.8E-26 138.7 13.8 124 7-131 65-198 (349)
15 PLN03084 alpha/beta hydrolase 99.9 1.1E-20 2.4E-25 136.9 15.9 122 7-131 108-233 (383)
16 PLN02965 Probable pheophorbida 99.9 3.9E-21 8.5E-26 132.9 12.5 102 26-130 5-107 (255)
17 PHA02857 monoglyceride lipase; 99.9 1.1E-20 2.4E-25 132.0 14.3 124 8-132 5-134 (276)
18 PLN03087 BODYGUARD 1 domain co 99.9 5.1E-20 1.1E-24 136.2 18.1 124 5-131 177-310 (481)
19 PRK06489 hypothetical protein; 99.9 6.6E-21 1.4E-25 137.8 13.2 118 10-129 46-188 (360)
20 PF12697 Abhydrolase_6: Alpha/ 99.9 1.1E-20 2.3E-25 127.1 12.6 102 27-131 1-102 (228)
21 PRK10673 acyl-CoA esterase; Pr 99.9 1.7E-20 3.7E-25 129.4 13.4 101 23-129 15-115 (255)
22 PRK11126 2-succinyl-6-hydroxy- 99.9 2E-20 4.3E-25 128.2 12.9 100 24-130 2-102 (242)
23 PRK10349 carboxylesterase BioH 99.8 1.7E-20 3.7E-25 129.7 11.9 105 15-129 3-108 (256)
24 TIGR03611 RutD pyrimidine util 99.8 3.7E-20 8E-25 127.2 13.5 105 23-131 12-116 (257)
25 TIGR01250 pro_imino_pep_2 prol 99.8 7.6E-20 1.6E-24 127.3 14.9 122 7-130 5-131 (288)
26 TIGR01249 pro_imino_pep_1 prol 99.8 5.7E-20 1.2E-24 130.3 13.8 124 5-131 5-131 (306)
27 TIGR03695 menH_SHCHC 2-succiny 99.8 1.1E-19 2.4E-24 123.8 13.2 105 24-131 1-106 (251)
28 COG2267 PldB Lysophospholipase 99.8 2.3E-19 4.9E-24 126.3 14.9 130 5-134 11-146 (298)
29 PRK08775 homoserine O-acetyltr 99.8 3.6E-20 7.9E-25 133.2 10.0 117 9-131 41-174 (343)
30 TIGR02427 protocat_pcaD 3-oxoa 99.8 6.2E-20 1.3E-24 125.2 10.6 111 16-131 2-115 (251)
31 PRK14875 acetoin dehydrogenase 99.8 7.9E-19 1.7E-23 127.2 16.0 119 7-130 112-232 (371)
32 TIGR03101 hydr2_PEP hydrolase, 99.8 7.4E-19 1.6E-23 121.5 14.5 108 24-133 25-137 (266)
33 TIGR01392 homoserO_Ac_trn homo 99.8 3.1E-19 6.6E-24 128.8 11.5 120 10-131 12-163 (351)
34 PRK05855 short chain dehydroge 99.8 1.7E-18 3.6E-23 132.0 14.4 122 3-127 2-128 (582)
35 KOG4409 Predicted hydrolase/ac 99.8 1.3E-18 2.9E-23 121.2 11.2 110 23-135 89-200 (365)
36 COG1647 Esterase/lipase [Gener 99.8 3E-18 6.4E-23 112.5 12.1 106 24-133 15-121 (243)
37 PLN02894 hydrolase, alpha/beta 99.8 4.6E-18 1E-22 124.5 14.0 105 22-130 103-211 (402)
38 PRK07581 hypothetical protein; 99.8 1.1E-18 2.4E-23 125.3 10.1 118 11-130 23-159 (339)
39 PLN02652 hydrolase; alpha/beta 99.8 7.8E-18 1.7E-22 122.7 14.2 118 12-131 119-246 (395)
40 PRK00175 metX homoserine O-ace 99.8 2.8E-18 6E-23 124.9 11.8 120 10-131 29-183 (379)
41 KOG1455 Lysophospholipase [Lip 99.8 1.5E-17 3.2E-22 114.1 14.5 126 6-132 30-166 (313)
42 TIGR01738 bioH putative pimelo 99.8 2.2E-18 4.7E-23 117.3 10.5 98 23-130 2-100 (245)
43 PLN02980 2-oxoglutarate decarb 99.8 2.4E-17 5.1E-22 136.9 15.8 123 4-129 1344-1479(1655)
44 PLN02511 hydrolase 99.8 2E-17 4.3E-22 120.7 13.5 118 12-131 80-211 (388)
45 PRK05077 frsA fermentation/res 99.7 3.7E-16 8.1E-21 114.7 16.3 107 23-131 193-301 (414)
46 KOG1454 Predicted hydrolase/ac 99.7 4.2E-17 9E-22 116.1 10.9 108 23-132 57-168 (326)
47 PRK13604 luxD acyl transferase 99.7 1.6E-16 3.5E-21 111.0 13.5 121 7-131 12-142 (307)
48 PRK10566 esterase; Provisional 99.7 2.6E-16 5.6E-21 108.4 13.9 103 24-126 27-138 (249)
49 TIGR01607 PST-A Plasmodium sub 99.7 7.1E-17 1.5E-21 115.6 11.1 122 10-131 4-186 (332)
50 PRK10985 putative hydrolase; P 99.7 1.5E-16 3.2E-21 113.7 12.7 107 23-132 57-170 (324)
51 TIGR03100 hydr1_PEP hydrolase, 99.7 1.6E-15 3.4E-20 106.1 15.4 105 23-132 25-136 (274)
52 KOG2984 Predicted hydrolase [G 99.7 2.4E-17 5.1E-22 107.1 5.7 130 3-134 20-153 (277)
53 KOG2564 Predicted acetyltransf 99.7 2E-16 4.2E-21 107.4 10.1 104 23-128 73-180 (343)
54 TIGR03230 lipo_lipase lipoprot 99.7 1.7E-15 3.6E-20 110.8 14.0 108 23-132 40-156 (442)
55 PF12695 Abhydrolase_5: Alpha/ 99.7 1.4E-15 3E-20 96.4 11.7 93 26-128 1-93 (145)
56 cd00707 Pancreat_lipase_like P 99.7 1.1E-15 2.3E-20 106.8 9.9 109 23-133 35-150 (275)
57 TIGR01840 esterase_phb esteras 99.6 9.4E-15 2E-19 98.6 12.7 108 23-130 12-130 (212)
58 PRK11071 esterase YqiA; Provis 99.6 6.9E-15 1.5E-19 97.6 11.2 89 25-131 2-94 (190)
59 PLN02872 triacylglycerol lipas 99.6 1.9E-15 4.1E-20 110.1 9.1 127 4-131 44-198 (395)
60 PLN00021 chlorophyllase 99.6 7.2E-15 1.6E-19 104.2 11.1 108 22-131 50-167 (313)
61 TIGR01836 PHA_synth_III_C poly 99.6 1.5E-14 3.2E-19 104.5 11.7 104 24-132 62-173 (350)
62 TIGR03502 lipase_Pla1_cef extr 99.6 5E-14 1.1E-18 109.0 13.3 110 6-115 420-575 (792)
63 TIGR02821 fghA_ester_D S-formy 99.6 1.9E-13 4.1E-18 95.7 14.0 111 23-133 41-176 (275)
64 TIGR00976 /NonD putative hydro 99.6 9.1E-14 2E-18 105.7 12.1 118 11-131 4-133 (550)
65 PF06342 DUF1057: Alpha/beta h 99.5 1.6E-13 3.4E-18 93.8 11.8 103 25-131 36-138 (297)
66 PLN02442 S-formylglutathione h 99.5 3.2E-13 6.9E-18 94.9 13.4 110 23-132 46-180 (283)
67 KOG2382 Predicted alpha/beta h 99.5 1.8E-13 4E-18 95.3 11.7 105 23-130 51-159 (315)
68 PRK06765 homoserine O-acetyltr 99.5 2.4E-13 5.3E-18 99.1 12.6 117 13-131 40-197 (389)
69 COG0596 MhpC Predicted hydrola 99.5 4.5E-13 9.7E-18 91.3 13.0 116 10-131 6-124 (282)
70 PF00561 Abhydrolase_1: alpha/ 99.5 8E-14 1.7E-18 94.3 9.2 76 52-129 1-78 (230)
71 TIGR01838 PHA_synth_I poly(R)- 99.5 1.7E-13 3.7E-18 102.9 11.3 109 23-133 187-305 (532)
72 PF06500 DUF1100: Alpha/beta h 99.5 1.6E-13 3.4E-18 99.1 8.9 129 4-134 165-300 (411)
73 KOG1552 Predicted alpha/beta h 99.5 1.3E-12 2.9E-17 88.2 11.7 105 24-132 60-165 (258)
74 PRK10162 acetyl esterase; Prov 99.5 9.7E-13 2.1E-17 93.9 11.5 108 23-132 80-197 (318)
75 KOG1838 Alpha/beta hydrolase [ 99.5 2.9E-12 6.2E-17 92.2 13.4 126 5-132 94-237 (409)
76 PF07819 PGAP1: PGAP1-like pro 99.5 2.9E-12 6.3E-17 87.0 12.7 110 23-134 3-127 (225)
77 PRK07868 acyl-CoA synthetase; 99.5 6.5E-13 1.4E-17 107.1 11.1 106 23-131 66-178 (994)
78 PF10230 DUF2305: Uncharacteri 99.5 4.4E-12 9.6E-17 88.3 13.7 112 24-135 2-127 (266)
79 PRK11460 putative hydrolase; P 99.5 2.8E-12 6.1E-17 87.7 12.5 108 23-130 15-138 (232)
80 PF12740 Chlorophyllase2: Chlo 99.4 1.6E-12 3.4E-17 88.9 10.4 113 16-130 8-131 (259)
81 PF12146 Hydrolase_4: Putative 99.4 1.6E-12 3.6E-17 73.9 8.3 75 13-88 1-79 (79)
82 PF00975 Thioesterase: Thioest 99.4 7E-12 1.5E-16 85.4 11.8 102 25-131 1-105 (229)
83 KOG2565 Predicted hydrolases o 99.4 5.3E-12 1.1E-16 89.2 9.1 116 5-123 125-257 (469)
84 PF10503 Esterase_phd: Esteras 99.4 3.6E-11 7.7E-16 81.1 12.3 108 23-130 15-132 (220)
85 KOG4391 Predicted alpha/beta h 99.4 3.8E-12 8.1E-17 84.0 7.2 116 12-132 63-186 (300)
86 PF03096 Ndr: Ndr family; Int 99.3 1.1E-10 2.3E-15 80.8 14.1 126 7-135 2-139 (283)
87 COG1506 DAP2 Dipeptidyl aminop 99.3 2.8E-11 6.1E-16 93.3 12.1 126 4-131 365-508 (620)
88 PF02230 Abhydrolase_2: Phosph 99.3 1.8E-11 3.9E-16 82.8 9.1 113 21-133 11-143 (216)
89 COG0429 Predicted hydrolase of 99.3 2E-11 4.4E-16 85.3 9.3 108 23-132 74-187 (345)
90 PF01738 DLH: Dienelactone hyd 99.3 2.5E-11 5.4E-16 82.2 9.1 105 23-128 13-130 (218)
91 PF02129 Peptidase_S15: X-Pro 99.3 8.3E-11 1.8E-15 82.3 11.4 107 25-134 21-140 (272)
92 PRK10115 protease 2; Provision 99.3 1.3E-10 2.8E-15 90.4 13.1 123 11-133 424-562 (686)
93 PF00326 Peptidase_S9: Prolyl 99.3 2.3E-11 4.9E-16 82.1 7.7 99 39-137 2-106 (213)
94 COG0412 Dienelactone hydrolase 99.3 1.2E-10 2.7E-15 79.7 11.4 106 25-131 28-147 (236)
95 KOG2931 Differentiation-relate 99.3 6.5E-10 1.4E-14 76.5 14.6 125 5-132 23-159 (326)
96 COG0400 Predicted esterase [Ge 99.3 7.3E-11 1.6E-15 78.8 9.2 111 23-134 17-138 (207)
97 COG2021 MET2 Homoserine acetyl 99.2 1.7E-10 3.6E-15 81.9 10.6 118 12-131 34-183 (368)
98 PLN02733 phosphatidylcholine-s 99.2 1.8E-10 3.9E-15 85.0 11.0 121 7-133 71-204 (440)
99 PF07224 Chlorophyllase: Chlor 99.2 7.4E-11 1.6E-15 80.0 7.9 109 21-132 43-159 (307)
100 PF07859 Abhydrolase_3: alpha/ 99.2 6.5E-11 1.4E-15 79.7 6.0 101 27-132 1-112 (211)
101 PF06821 Ser_hydrolase: Serine 99.2 4.9E-10 1.1E-14 73.0 9.9 89 27-131 1-92 (171)
102 COG3509 LpqC Poly(3-hydroxybut 99.2 5.6E-10 1.2E-14 77.0 10.2 124 5-130 36-179 (312)
103 TIGR01839 PHA_synth_II poly(R) 99.2 4.8E-10 1E-14 84.2 10.7 105 24-133 215-331 (560)
104 PF05577 Peptidase_S28: Serine 99.2 5.6E-10 1.2E-14 83.0 11.1 121 24-145 29-163 (434)
105 KOG4667 Predicted esterase [Li 99.2 7E-10 1.5E-14 73.3 9.8 111 22-135 31-144 (269)
106 PF01674 Lipase_2: Lipase (cla 99.1 5.9E-11 1.3E-15 79.9 4.8 102 25-129 2-122 (219)
107 PF06028 DUF915: Alpha/beta hy 99.1 6.4E-10 1.4E-14 76.6 9.9 110 24-133 11-146 (255)
108 COG3319 Thioesterase domains o 99.1 3.1E-09 6.8E-14 73.1 12.6 101 25-131 1-104 (257)
109 PF00151 Lipase: Lipase; Inte 99.1 6.4E-11 1.4E-15 84.6 4.3 111 23-135 70-192 (331)
110 PF05448 AXE1: Acetyl xylan es 99.1 2.6E-09 5.7E-14 76.2 12.4 105 25-131 84-210 (320)
111 COG2945 Predicted hydrolase of 99.1 4.7E-09 1E-13 68.2 11.7 112 15-131 17-138 (210)
112 COG0657 Aes Esterase/lipase [L 99.1 1.7E-09 3.6E-14 77.1 10.9 110 23-134 78-195 (312)
113 PF03403 PAF-AH_p_II: Platelet 99.1 5.8E-10 1.3E-14 81.2 8.2 110 23-133 99-265 (379)
114 COG3571 Predicted hydrolase of 99.1 5.7E-09 1.2E-13 66.1 10.9 116 21-139 10-133 (213)
115 PRK10252 entF enterobactin syn 99.1 2.4E-09 5.2E-14 88.9 11.7 103 21-129 1065-1170(1296)
116 PF12715 Abhydrolase_7: Abhydr 99.1 2E-09 4.3E-14 77.1 9.5 102 25-127 116-257 (390)
117 PF05728 UPF0227: Uncharacteri 99.0 4.2E-09 9.1E-14 69.5 9.5 90 27-134 2-95 (187)
118 KOG2281 Dipeptidyl aminopeptid 99.0 2.2E-09 4.7E-14 80.9 8.8 109 23-131 641-763 (867)
119 KOG1515 Arylacetamide deacetyl 99.0 2.1E-08 4.5E-13 71.7 13.1 111 23-138 89-215 (336)
120 COG3208 GrsT Predicted thioest 99.0 2.5E-09 5.5E-14 72.1 8.0 100 23-127 6-109 (244)
121 PF05990 DUF900: Alpha/beta hy 99.0 7.9E-09 1.7E-13 70.7 10.5 110 22-132 16-139 (233)
122 COG3458 Acetyl esterase (deace 99.0 1.2E-09 2.6E-14 74.5 6.1 121 10-132 63-212 (321)
123 KOG2624 Triglyceride lipase-ch 99.0 6.7E-09 1.4E-13 75.7 10.3 130 4-133 48-202 (403)
124 KOG3975 Uncharacterized conser 99.0 5.2E-08 1.1E-12 65.9 12.5 126 5-130 2-147 (301)
125 KOG2100 Dipeptidyl aminopeptid 98.9 2.4E-08 5.3E-13 78.5 12.6 126 4-131 498-645 (755)
126 TIGR01849 PHB_depoly_PhaZ poly 98.9 1.3E-07 2.8E-12 69.2 14.8 104 25-134 103-212 (406)
127 PF02273 Acyl_transf_2: Acyl t 98.9 9.4E-08 2E-12 64.6 12.5 120 6-129 4-133 (294)
128 PF05057 DUF676: Putative seri 98.9 8.3E-09 1.8E-13 69.9 7.7 87 25-114 5-97 (217)
129 PF08538 DUF1749: Protein of u 98.9 6.9E-08 1.5E-12 67.6 12.1 107 25-136 34-154 (303)
130 PF06057 VirJ: Bacterial virul 98.9 1.8E-08 3.9E-13 65.9 8.2 99 26-131 4-108 (192)
131 COG2272 PnbA Carboxylesterase 98.8 1.9E-08 4E-13 74.1 8.2 121 12-132 78-219 (491)
132 KOG3101 Esterase D [General fu 98.8 6.2E-09 1.3E-13 68.7 5.0 125 24-149 44-194 (283)
133 PF00756 Esterase: Putative es 98.8 7.1E-09 1.5E-13 71.6 5.6 54 79-132 98-152 (251)
134 COG1075 LipA Predicted acetylt 98.8 2.2E-08 4.7E-13 72.1 8.1 101 26-132 61-166 (336)
135 COG4099 Predicted peptidase [G 98.8 2.5E-08 5.5E-13 69.1 7.7 104 25-131 192-305 (387)
136 cd00312 Esterase_lipase Estera 98.8 3E-08 6.6E-13 74.9 8.7 108 23-132 94-215 (493)
137 PRK10439 enterobactin/ferric e 98.8 1.1E-07 2.3E-12 70.3 11.1 105 24-130 209-323 (411)
138 PTZ00472 serine carboxypeptida 98.8 3.1E-07 6.8E-12 68.8 12.8 129 6-135 49-221 (462)
139 KOG3847 Phospholipase A2 (plat 98.8 3.4E-08 7.4E-13 68.9 7.0 109 24-133 118-278 (399)
140 KOG2183 Prolylcarboxypeptidase 98.8 4.8E-08 1E-12 70.4 7.7 107 25-131 81-203 (492)
141 PF05677 DUF818: Chlamydia CHL 98.7 1.6E-07 3.5E-12 66.4 9.9 107 5-116 113-236 (365)
142 COG4814 Uncharacterized protei 98.7 1.8E-07 3.9E-12 63.4 8.9 106 26-131 47-177 (288)
143 KOG3724 Negative regulator of 98.7 6.4E-08 1.4E-12 74.7 7.3 103 24-131 89-221 (973)
144 COG4188 Predicted dienelactone 98.7 1.4E-07 3E-12 67.4 8.5 94 24-117 71-181 (365)
145 COG4757 Predicted alpha/beta h 98.7 9E-08 2E-12 64.2 7.0 104 11-114 13-124 (281)
146 PRK05371 x-prolyl-dipeptidyl a 98.7 2.6E-07 5.5E-12 73.1 10.6 86 42-130 270-373 (767)
147 COG3545 Predicted esterase of 98.7 4E-07 8.6E-12 58.6 9.5 92 25-131 3-95 (181)
148 PF00135 COesterase: Carboxyle 98.7 6.4E-08 1.4E-12 73.6 6.8 107 24-131 125-246 (535)
149 KOG4627 Kynurenine formamidase 98.7 5.6E-08 1.2E-12 64.1 5.5 101 23-131 66-173 (270)
150 COG2936 Predicted acyl esteras 98.6 1.7E-07 3.7E-12 70.6 8.1 121 9-132 25-161 (563)
151 KOG3043 Predicted hydrolase re 98.6 6.2E-08 1.3E-12 64.5 5.1 124 7-131 21-155 (242)
152 KOG2182 Hydrolytic enzymes of 98.6 7.6E-07 1.6E-11 65.7 10.6 123 21-143 83-220 (514)
153 COG0627 Predicted esterase [Ge 98.6 3.9E-07 8.3E-12 64.9 8.4 111 23-133 53-190 (316)
154 PRK04940 hypothetical protein; 98.6 6.6E-07 1.4E-11 58.4 8.5 93 27-134 2-96 (180)
155 KOG1553 Predicted alpha/beta h 98.6 3.6E-07 7.9E-12 64.8 7.8 121 6-131 217-346 (517)
156 PLN02606 palmitoyl-protein thi 98.6 1E-06 2.2E-11 61.8 9.9 103 24-131 26-133 (306)
157 KOG2112 Lysophospholipase [Lip 98.6 7.5E-07 1.6E-11 58.8 8.5 107 25-131 4-129 (206)
158 COG4782 Uncharacterized protei 98.5 1.3E-06 2.7E-11 62.4 9.4 111 23-134 115-238 (377)
159 KOG4840 Predicted hydrolases o 98.5 7.2E-07 1.6E-11 59.6 7.2 106 23-133 35-147 (299)
160 PF02450 LCAT: Lecithin:choles 98.5 2.2E-06 4.7E-11 63.1 10.0 84 39-132 66-162 (389)
161 smart00824 PKS_TE Thioesterase 98.5 9.5E-06 2.1E-10 54.0 12.5 90 35-130 10-102 (212)
162 PF09752 DUF2048: Uncharacteri 98.4 4.7E-06 1E-10 59.5 10.3 107 23-129 91-209 (348)
163 KOG2541 Palmitoyl protein thio 98.4 4.1E-06 8.9E-11 57.4 9.6 102 25-131 24-129 (296)
164 PF12048 DUF3530: Protein of u 98.4 8.3E-05 1.8E-09 53.2 16.6 110 26-135 89-234 (310)
165 PF10340 DUF2424: Protein of u 98.4 7E-06 1.5E-10 59.4 11.0 106 23-133 121-238 (374)
166 PF00450 Peptidase_S10: Serine 98.4 9.2E-06 2E-10 60.1 11.5 128 5-133 12-184 (415)
167 COG3243 PhaC Poly(3-hydroxyalk 98.4 8.9E-07 1.9E-11 64.3 5.6 103 24-131 107-218 (445)
168 PLN02633 palmitoyl protein thi 98.3 9.5E-06 2.1E-10 57.1 9.8 103 24-131 25-132 (314)
169 PF03959 FSH1: Serine hydrolas 98.2 1.4E-05 3.1E-10 54.0 9.0 107 23-132 3-147 (212)
170 PF02089 Palm_thioest: Palmito 98.2 1.8E-06 4E-11 60.0 4.4 106 25-131 6-117 (279)
171 COG3150 Predicted esterase [Ge 98.2 2.3E-05 5E-10 50.2 8.4 91 27-133 2-94 (191)
172 COG1770 PtrB Protease II [Amin 98.1 3.6E-06 7.7E-11 64.2 4.8 124 11-134 427-566 (682)
173 KOG3967 Uncharacterized conser 98.1 5.4E-05 1.2E-09 50.6 9.0 104 25-130 102-227 (297)
174 PLN02517 phosphatidylcholine-s 98.1 6.7E-06 1.4E-10 62.5 5.4 91 39-131 157-264 (642)
175 COG2819 Predicted hydrolase of 98.0 0.00018 4E-09 49.7 10.6 52 80-131 121-173 (264)
176 PF11144 DUF2920: Protein of u 97.9 0.00014 3.1E-09 53.1 9.6 38 95-132 184-221 (403)
177 PF03583 LIP: Secretory lipase 97.9 5.1E-05 1.1E-09 53.7 7.3 87 41-131 16-114 (290)
178 COG2382 Fes Enterochelin ester 97.9 3.1E-05 6.7E-10 54.2 5.7 110 23-132 97-214 (299)
179 KOG1516 Carboxylesterase and r 97.9 5.2E-05 1.1E-09 58.2 7.1 108 24-131 112-233 (545)
180 COG1505 Serine proteases of th 97.9 1.6E-05 3.5E-10 60.2 3.7 128 4-131 394-536 (648)
181 KOG2237 Predicted serine prote 97.8 3.4E-05 7.4E-10 58.9 4.5 109 23-131 469-585 (712)
182 cd00741 Lipase Lipase. Lipase 97.8 7.8E-05 1.7E-09 47.7 5.6 43 93-135 26-72 (153)
183 PF05576 Peptidase_S37: PS-10 97.7 0.00013 2.9E-09 53.2 6.5 107 23-132 62-171 (448)
184 PLN03016 sinapoylglucose-malat 97.7 0.0011 2.5E-08 49.6 11.5 128 5-133 38-213 (433)
185 COG3946 VirJ Type IV secretory 97.7 0.0002 4.3E-09 52.1 6.9 78 26-110 262-341 (456)
186 PLN02209 serine carboxypeptida 97.7 0.0011 2.4E-08 49.6 10.9 128 6-133 41-215 (437)
187 PF07082 DUF1350: Protein of u 97.7 0.0015 3.3E-08 44.8 10.6 91 26-127 19-122 (250)
188 PF11339 DUF3141: Protein of u 97.7 0.00068 1.5E-08 51.1 9.5 82 46-134 95-179 (581)
189 PF08840 BAAT_C: BAAT / Acyl-C 97.7 0.00021 4.6E-09 48.4 6.3 39 93-132 20-58 (213)
190 PF06259 Abhydrolase_8: Alpha/ 97.6 0.0015 3.3E-08 42.8 9.4 55 77-131 88-145 (177)
191 PF01764 Lipase_3: Lipase (cla 97.6 0.00029 6.3E-09 44.2 5.8 34 80-115 51-84 (140)
192 KOG2369 Lecithin:cholesterol a 97.4 0.00016 3.5E-09 53.5 3.6 86 38-130 124-225 (473)
193 PF11187 DUF2974: Protein of u 97.4 0.0057 1.2E-07 41.8 10.7 49 80-131 72-124 (224)
194 KOG2551 Phospholipase/carboxyh 97.3 0.0074 1.6E-07 40.7 10.2 106 23-132 4-149 (230)
195 PF06441 EHN: Epoxide hydrolas 97.3 0.0011 2.3E-08 40.2 5.5 41 3-43 67-111 (112)
196 COG2939 Carboxypeptidase C (ca 97.3 0.0012 2.6E-08 49.5 6.4 111 23-134 100-240 (498)
197 KOG1282 Serine carboxypeptidas 97.2 0.0041 8.9E-08 46.7 8.7 128 5-134 45-217 (454)
198 PF05277 DUF726: Protein of un 97.2 0.0019 4.2E-08 46.7 6.7 61 82-145 207-272 (345)
199 PF04301 DUF452: Protein of un 97.1 0.0042 9.2E-08 41.9 7.5 80 24-131 11-91 (213)
200 cd00519 Lipase_3 Lipase (class 97.1 0.0019 4E-08 44.2 5.7 23 93-115 126-148 (229)
201 PLN00413 triacylglycerol lipas 97.1 0.0031 6.7E-08 47.3 7.0 57 79-137 270-334 (479)
202 PLN02162 triacylglycerol lipas 97.1 0.0039 8.5E-08 46.7 7.4 55 82-138 267-329 (475)
203 PF01083 Cutinase: Cutinase; 96.9 0.0061 1.3E-07 40.2 6.6 77 52-132 40-124 (179)
204 PLN02408 phospholipase A1 96.8 0.0029 6.3E-08 46.1 5.1 37 79-115 184-220 (365)
205 COG4947 Uncharacterized protei 96.7 0.0056 1.2E-07 39.8 5.2 39 94-132 100-138 (227)
206 PLN02571 triacylglycerol lipas 96.7 0.0041 8.9E-08 46.0 5.0 39 77-115 208-246 (413)
207 PF08237 PE-PPE: PE-PPE domain 96.6 0.037 7.9E-07 37.9 9.1 85 51-135 2-94 (225)
208 PLN02310 triacylglycerol lipas 96.6 0.01 2.2E-07 43.9 6.5 56 77-132 189-250 (405)
209 PF11288 DUF3089: Protein of u 96.6 0.0076 1.6E-07 40.5 5.4 69 46-116 41-116 (207)
210 PLN02213 sinapoylglucose-malat 96.6 0.02 4.4E-07 41.3 8.0 83 52-134 2-100 (319)
211 PLN02454 triacylglycerol lipas 96.6 0.011 2.3E-07 43.9 6.4 20 96-115 229-248 (414)
212 KOG4388 Hormone-sensitive lipa 96.4 0.015 3.3E-07 44.8 6.7 99 26-129 398-507 (880)
213 PLN02324 triacylglycerol lipas 96.4 0.0083 1.8E-07 44.4 5.0 37 79-115 199-235 (415)
214 KOG1202 Animal-type fatty acid 96.4 0.025 5.3E-07 47.3 7.8 95 23-130 2122-2219(2376)
215 PLN02934 triacylglycerol lipas 96.2 0.018 4E-07 43.6 6.2 34 79-114 307-340 (515)
216 PLN03037 lipase class 3 family 96.2 0.021 4.5E-07 43.4 6.5 38 78-115 299-338 (525)
217 PF05705 DUF829: Eukaryotic pr 96.2 0.11 2.4E-06 35.7 9.6 101 26-131 1-113 (240)
218 PLN02802 triacylglycerol lipas 96.1 0.013 2.7E-07 44.5 4.9 37 79-115 314-350 (509)
219 KOG3253 Predicted alpha/beta h 95.9 0.026 5.7E-07 43.6 5.8 101 24-133 176-289 (784)
220 PF04083 Abhydro_lipase: Parti 95.8 0.035 7.5E-07 30.0 4.6 37 4-40 12-59 (63)
221 PLN02761 lipase class 3 family 95.8 0.022 4.7E-07 43.4 5.0 36 79-114 274-313 (527)
222 KOG4372 Predicted alpha/beta h 95.7 0.019 4.1E-07 42.2 4.2 83 26-112 82-167 (405)
223 TIGR03712 acc_sec_asp2 accesso 95.7 0.1 2.2E-06 39.5 7.9 108 18-131 281-391 (511)
224 PF09994 DUF2235: Uncharacteri 95.6 0.18 4E-06 35.7 8.7 90 25-115 2-112 (277)
225 KOG4569 Predicted lipase [Lipi 95.6 0.059 1.3E-06 39.2 6.3 53 77-131 155-213 (336)
226 PLN02753 triacylglycerol lipas 95.5 0.034 7.3E-07 42.4 5.0 37 79-115 293-332 (531)
227 PLN02719 triacylglycerol lipas 95.2 0.044 9.6E-07 41.7 4.9 37 79-115 279-318 (518)
228 PLN02847 triacylglycerol lipas 94.7 0.078 1.7E-06 41.2 5.0 23 93-115 249-271 (633)
229 COG4553 DepA Poly-beta-hydroxy 94.3 1.4 3E-05 31.6 12.5 127 3-135 61-214 (415)
230 KOG4389 Acetylcholinesterase/B 94.2 0.08 1.7E-06 40.2 4.1 105 25-131 136-256 (601)
231 KOG2029 Uncharacterized conser 94.0 0.2 4.3E-06 38.9 5.8 51 81-131 511-573 (697)
232 PF07519 Tannase: Tannase and 93.9 0.13 2.7E-06 39.4 4.7 84 46-131 54-151 (474)
233 KOG2385 Uncharacterized conser 93.4 0.39 8.4E-06 36.8 6.3 51 82-132 434-489 (633)
234 COG3673 Uncharacterized conser 91.9 2.1 4.6E-05 31.1 8.1 91 25-115 32-142 (423)
235 COG2830 Uncharacterized protei 91.4 0.66 1.4E-05 30.1 4.7 75 26-127 13-87 (214)
236 KOG1283 Serine carboxypeptidas 90.9 4 8.7E-05 29.8 8.6 110 23-134 30-170 (414)
237 COG5153 CVT17 Putative lipase 90.3 0.56 1.2E-05 33.4 4.0 35 82-117 264-298 (425)
238 KOG4540 Putative lipase essent 90.3 0.56 1.2E-05 33.4 4.0 35 82-117 264-298 (425)
239 KOG1551 Uncharacterized conser 90.0 0.28 6.1E-06 34.5 2.3 99 24-123 113-223 (371)
240 KOG2521 Uncharacterized conser 89.9 4.3 9.3E-05 29.9 8.3 85 26-111 40-125 (350)
241 PF09949 DUF2183: Uncharacteri 89.5 3 6.5E-05 24.8 9.0 83 40-125 13-97 (100)
242 COG0529 CysC Adenylylsulfate k 88.9 5.1 0.00011 26.7 8.1 39 22-60 20-60 (197)
243 PF06309 Torsin: Torsin; Inte 85.1 2.1 4.5E-05 26.6 3.8 30 22-51 50-81 (127)
244 PRK12467 peptide synthase; Pro 83.0 20 0.00043 35.3 10.6 96 25-126 3693-3791(3956)
245 COG1448 TyrB Aspartate/tyrosin 81.9 15 0.00033 27.4 7.6 84 26-128 173-263 (396)
246 PF06792 UPF0261: Uncharacteri 79.9 24 0.00052 26.7 9.1 99 25-123 2-123 (403)
247 PF08484 Methyltransf_14: C-me 78.6 6.3 0.00014 25.5 4.5 48 77-124 51-98 (160)
248 PF01583 APS_kinase: Adenylyls 76.4 6.4 0.00014 25.4 4.0 37 24-60 1-39 (156)
249 KOG0781 Signal recognition par 76.2 12 0.00027 28.9 5.9 86 29-126 443-538 (587)
250 TIGR02873 spore_ylxY probable 75.7 5.1 0.00011 28.4 3.8 33 26-58 232-264 (268)
251 PF12242 Eno-Rase_NADH_b: NAD( 74.3 13 0.00028 21.0 4.3 41 77-117 20-62 (78)
252 TIGR02764 spore_ybaN_pdaB poly 74.1 4 8.7E-05 27.0 2.8 33 26-58 153-188 (191)
253 PRK05282 (alpha)-aspartyl dipe 72.1 21 0.00045 24.8 6.0 38 23-60 30-70 (233)
254 PF00326 Peptidase_S9: Prolyl 72.0 8.5 0.00019 25.7 4.1 42 23-64 143-187 (213)
255 TIGR02884 spore_pdaA delta-lac 71.6 7.1 0.00015 26.7 3.6 33 26-58 188-221 (224)
256 COG3340 PepE Peptidase E [Amin 69.3 19 0.00042 24.7 5.1 37 23-59 31-70 (224)
257 COG1073 Hydrolases of the alph 68.6 14 0.0003 25.6 4.7 37 23-59 48-84 (299)
258 COG1506 DAP2 Dipeptidyl aminop 67.2 14 0.0003 29.6 4.8 42 24-65 551-595 (620)
259 PRK05579 bifunctional phosphop 67.1 53 0.0011 24.9 10.2 75 25-102 117-196 (399)
260 PF03283 PAE: Pectinacetyleste 63.7 44 0.00096 24.9 6.6 22 93-114 154-175 (361)
261 COG3946 VirJ Type IV secretory 60.5 56 0.0012 24.9 6.5 101 26-128 50-155 (456)
262 cd07198 Patatin Patatin-like p 59.5 25 0.00054 22.8 4.3 25 93-117 24-48 (172)
263 KOG2872 Uroporphyrinogen decar 59.2 13 0.00027 26.8 2.9 29 25-60 253-281 (359)
264 TIGR03709 PPK2_rel_1 polyphosp 59.1 21 0.00045 25.4 4.0 38 23-60 54-93 (264)
265 TIGR03131 malonate_mdcH malona 58.2 18 0.0004 25.7 3.8 22 93-114 74-95 (295)
266 TIGR03707 PPK2_P_aer polyphosp 58.1 22 0.00047 24.7 3.9 38 23-60 29-68 (230)
267 smart00827 PKS_AT Acyl transfe 57.7 18 0.0004 25.6 3.7 28 85-114 74-101 (298)
268 cd03818 GT1_ExpC_like This fam 57.6 76 0.0016 23.5 7.3 35 27-63 2-36 (396)
269 COG3007 Uncharacterized paraqu 57.2 74 0.0016 23.3 6.5 46 74-119 18-66 (398)
270 PRK02399 hypothetical protein; 57.1 85 0.0018 23.9 9.8 98 25-123 4-125 (406)
271 PF00698 Acyl_transf_1: Acyl t 55.3 11 0.00024 27.2 2.3 29 84-114 75-103 (318)
272 cd07207 Pat_ExoU_VipD_like Exo 55.2 30 0.00066 22.7 4.3 24 93-116 25-48 (194)
273 cd07225 Pat_PNPLA6_PNPLA7 Pata 54.4 29 0.00064 25.1 4.3 33 82-116 32-64 (306)
274 PF03853 YjeF_N: YjeF-related 54.2 23 0.00051 23.0 3.5 34 23-56 24-57 (169)
275 TIGR00521 coaBC_dfp phosphopan 54.2 94 0.002 23.5 10.2 75 25-102 113-193 (390)
276 KOG2170 ATPase of the AAA+ sup 53.4 26 0.00056 25.6 3.7 31 22-52 107-139 (344)
277 cd01714 ETF_beta The electron 52.8 69 0.0015 21.6 6.9 41 73-116 90-134 (202)
278 COG3727 Vsr DNA G:T-mismatch r 52.8 39 0.00085 21.3 4.0 14 44-57 101-114 (150)
279 cd00842 MPP_ASMase acid sphing 52.3 40 0.00086 24.0 4.7 29 74-102 193-221 (296)
280 cd07210 Pat_hypo_W_succinogene 51.1 43 0.00092 22.9 4.5 24 93-116 26-49 (221)
281 KOG1202 Animal-type fatty acid 50.9 7.4 0.00016 33.8 0.9 29 79-109 568-596 (2376)
282 TIGR00128 fabD malonyl CoA-acy 50.8 26 0.00056 24.7 3.6 21 94-114 82-102 (290)
283 COG0541 Ffh Signal recognition 50.0 1.2E+02 0.0026 23.5 7.0 48 77-126 198-247 (451)
284 PF03976 PPK2: Polyphosphate k 49.4 8.1 0.00018 26.7 0.8 37 24-60 30-68 (228)
285 KOG1209 1-Acyl dihydroxyaceton 49.0 40 0.00087 23.4 3.9 38 22-60 4-41 (289)
286 cd07209 Pat_hypo_Ecoli_Z1214_l 48.8 42 0.00091 22.8 4.2 32 84-117 17-48 (215)
287 PF10081 Abhydrolase_9: Alpha/ 48.7 1E+02 0.0022 22.3 7.7 51 81-131 94-148 (289)
288 PF05724 TPMT: Thiopurine S-me 48.2 24 0.00051 24.2 2.9 31 25-60 38-68 (218)
289 PF03033 Glyco_transf_28: Glyc 48.0 15 0.00033 22.5 1.9 34 27-60 2-35 (139)
290 PTZ00445 p36-lilke protein; Pr 47.9 71 0.0015 22.0 5.0 24 38-61 29-52 (219)
291 cd07228 Pat_NTE_like_bacteria 47.6 48 0.001 21.5 4.2 25 93-117 26-50 (175)
292 cd07227 Pat_Fungal_NTE1 Fungal 47.5 46 0.00099 23.7 4.3 32 83-116 28-59 (269)
293 COG0218 Predicted GTPase [Gene 47.0 33 0.00072 23.2 3.3 32 54-89 72-103 (200)
294 PRK10279 hypothetical protein; 46.7 42 0.0009 24.3 4.0 33 83-117 23-55 (300)
295 COG0279 GmhA Phosphoheptose is 46.7 25 0.00053 23.1 2.6 34 28-62 44-77 (176)
296 COG1752 RssA Predicted esteras 46.4 42 0.00092 24.1 4.1 33 82-116 28-60 (306)
297 COG1225 Bcp Peroxiredoxin [Pos 45.0 52 0.0011 21.4 3.9 48 12-59 19-72 (157)
298 COG3933 Transcriptional antite 44.7 1.5E+02 0.0032 23.1 7.8 71 25-110 110-180 (470)
299 PF08433 KTI12: Chromatin asso 44.7 75 0.0016 22.6 5.0 73 26-100 2-76 (270)
300 TIGR01626 ytfJ_HI0045 conserve 44.3 64 0.0014 21.5 4.4 48 7-54 38-91 (184)
301 TIGR03127 RuMP_HxlB 6-phospho 44.3 47 0.001 21.6 3.8 33 27-59 32-64 (179)
302 PRK01261 aroD 3-dehydroquinate 44.2 39 0.00084 23.4 3.4 46 98-147 178-223 (229)
303 PF10561 UPF0565: Uncharacteri 43.6 48 0.001 24.1 3.9 37 95-131 193-245 (303)
304 PF14253 AbiH: Bacteriophage a 43.6 29 0.00063 24.2 2.9 17 93-109 233-249 (270)
305 PRK02842 light-independent pro 42.7 1E+02 0.0023 23.5 5.8 41 24-64 97-142 (427)
306 COG3887 Predicted signaling pr 42.5 54 0.0012 26.3 4.2 35 93-128 336-376 (655)
307 PRK13255 thiopurine S-methyltr 42.4 38 0.00081 23.2 3.2 28 26-60 41-68 (218)
308 PRK13256 thiopurine S-methyltr 42.1 31 0.00067 23.8 2.7 29 27-60 46-74 (226)
309 PHA02114 hypothetical protein 42.0 51 0.0011 19.6 3.2 33 26-58 84-116 (127)
310 PRK06696 uridine kinase; Valid 41.9 85 0.0018 21.3 4.9 38 22-59 19-58 (223)
311 COG0859 RfaF ADP-heptose:LPS h 41.3 70 0.0015 23.3 4.6 37 24-60 175-217 (334)
312 cd07212 Pat_PNPLA9 Patatin-lik 40.3 32 0.00068 25.0 2.7 20 97-116 34-53 (312)
313 cd07230 Pat_TGL4-5_like Triacy 39.8 44 0.00095 25.5 3.4 27 93-119 99-125 (421)
314 PRK09936 hypothetical protein; 39.8 79 0.0017 22.9 4.4 31 36-66 36-66 (296)
315 PRK14581 hmsF outer membrane N 39.8 53 0.0011 26.8 4.0 37 23-59 47-93 (672)
316 KOG1411 Aspartate aminotransfe 39.5 1.1E+02 0.0024 23.0 5.2 84 26-127 199-289 (427)
317 PF03610 EIIA-man: PTS system 39.5 85 0.0018 18.8 7.7 75 26-114 2-77 (116)
318 PF01075 Glyco_transf_9: Glyco 39.3 65 0.0014 22.0 4.0 37 23-59 104-145 (247)
319 cd05005 SIS_PHI Hexulose-6-pho 39.1 69 0.0015 20.8 4.0 31 28-58 36-66 (179)
320 cd07229 Pat_TGL3_like Triacylg 38.7 49 0.0011 25.0 3.5 30 93-122 109-138 (391)
321 cd07224 Pat_like Patatin-like 38.7 84 0.0018 21.7 4.5 22 96-117 30-51 (233)
322 PF10142 PhoPQ_related: PhoPQ- 38.4 1.7E+02 0.0037 22.0 7.6 35 93-128 170-204 (367)
323 cd07205 Pat_PNPLA6_PNPLA7_NTE1 37.8 96 0.0021 20.0 4.5 24 93-116 26-49 (175)
324 cd01983 Fer4_NifH The Fer4_Nif 37.8 72 0.0016 17.5 3.7 30 29-58 3-34 (99)
325 PF01118 Semialdhyde_dh: Semia 37.6 65 0.0014 19.5 3.5 30 96-126 1-31 (121)
326 cd07232 Pat_PLPL Patain-like p 37.2 51 0.0011 25.1 3.4 30 93-122 93-122 (407)
327 PRK07933 thymidylate kinase; V 37.0 1.1E+02 0.0023 20.8 4.7 39 27-65 2-42 (213)
328 PRK09437 bcp thioredoxin-depen 37.0 1.1E+02 0.0023 19.2 5.1 50 10-59 17-72 (154)
329 COG1092 Predicted SAM-dependen 36.9 1.9E+02 0.004 22.1 6.2 56 44-104 281-338 (393)
330 PRK06193 hypothetical protein; 36.8 76 0.0016 21.6 3.9 30 75-104 136-165 (206)
331 cd07231 Pat_SDP1-like Sugar-De 36.8 56 0.0012 24.0 3.4 24 93-116 94-117 (323)
332 PRK14974 cell division protein 36.6 1.8E+02 0.0038 21.6 6.6 69 46-126 217-287 (336)
333 TIGR02069 cyanophycinase cyano 36.2 1.5E+02 0.0033 20.8 7.5 38 23-60 27-66 (250)
334 cd07208 Pat_hypo_Ecoli_yjju_li 35.9 86 0.0019 21.9 4.3 23 96-118 28-50 (266)
335 PF09695 YtfJ_HI0045: Bacteria 35.7 1.2E+02 0.0026 19.8 4.4 46 6-51 15-66 (160)
336 KOG0855 Alkyl hydroperoxide re 35.7 1.1E+02 0.0023 20.4 4.2 49 12-60 78-133 (211)
337 PRK10162 acetyl esterase; Prov 35.3 1.4E+02 0.0031 21.6 5.4 39 25-63 249-288 (318)
338 PF01656 CbiA: CobQ/CobB/MinD/ 35.3 72 0.0016 20.7 3.7 32 29-60 3-36 (195)
339 TIGR02540 gpx7 putative glutat 34.8 1.2E+02 0.0026 19.1 7.0 57 9-65 8-69 (153)
340 PF01221 Dynein_light: Dynein 34.7 32 0.0007 19.7 1.7 33 75-108 34-66 (89)
341 PF04244 DPRP: Deoxyribodipyri 34.7 1.5E+02 0.0032 20.5 5.1 47 41-100 52-98 (224)
342 TIGR03169 Nterm_to_SelD pyridi 34.6 62 0.0013 23.7 3.5 33 96-128 1-33 (364)
343 PLN03050 pyridoxine (pyridoxam 34.5 1E+02 0.0022 21.7 4.3 34 25-58 61-94 (246)
344 COG4425 Predicted membrane pro 34.3 1.1E+02 0.0023 24.0 4.5 56 76-131 377-436 (588)
345 PF00448 SRP54: SRP54-type pro 34.1 1.5E+02 0.0032 19.9 8.3 73 42-126 74-148 (196)
346 PRK14729 miaA tRNA delta(2)-is 33.9 1.9E+02 0.004 21.1 8.1 76 25-102 4-100 (300)
347 cd07218 Pat_iPLA2 Calcium-inde 33.9 1.1E+02 0.0023 21.4 4.4 20 98-117 33-52 (245)
348 PRK03094 hypothetical protein; 33.9 60 0.0013 18.5 2.6 21 39-59 9-29 (80)
349 KOG4153 Fructose 1,6-bisphosph 33.8 96 0.0021 22.2 4.0 33 23-58 256-288 (358)
350 PF03698 UPF0180: Uncharacteri 33.5 58 0.0012 18.5 2.5 21 39-59 9-29 (80)
351 TIGR03708 poly_P_AMP_trns poly 33.4 95 0.0021 24.4 4.3 39 23-61 38-78 (493)
352 KOG3179 Predicted glutamine sy 33.2 80 0.0017 21.7 3.4 40 73-114 72-111 (245)
353 KOG3062 RNA polymerase II elon 33.1 1.8E+02 0.0038 20.6 7.8 74 26-100 2-79 (281)
354 PLN02412 probable glutathione 32.9 1.4E+02 0.003 19.3 4.7 52 11-62 17-73 (167)
355 cd01820 PAF_acetylesterase_lik 32.9 93 0.002 20.8 3.9 31 74-104 12-42 (214)
356 PF00148 Oxidored_nitro: Nitro 32.8 1.1E+02 0.0024 22.8 4.6 62 37-104 90-154 (398)
357 COG4850 Uncharacterized conser 32.8 2E+02 0.0043 21.5 5.5 46 80-127 265-312 (373)
358 PF03205 MobB: Molybdopterin g 32.5 84 0.0018 19.7 3.4 40 26-65 1-42 (140)
359 PRK14582 pgaB outer membrane N 32.0 73 0.0016 26.1 3.6 37 23-59 47-93 (671)
360 cd03784 GT1_Gtf_like This fami 31.8 1E+02 0.0023 22.8 4.4 35 26-60 3-37 (401)
361 PF03681 UPF0150: Uncharacteri 31.8 71 0.0015 15.6 2.6 33 50-89 12-44 (48)
362 PRK10964 ADP-heptose:LPS hepto 31.7 1E+02 0.0023 22.2 4.2 34 24-57 178-216 (322)
363 TIGR03840 TMPT_Se_Te thiopurin 31.6 64 0.0014 22.0 2.9 16 44-59 49-64 (213)
364 PRK14194 bifunctional 5,10-met 31.1 1.2E+02 0.0026 22.1 4.3 36 80-115 143-182 (301)
365 PRK05368 homoserine O-succinyl 30.9 60 0.0013 23.6 2.8 35 79-115 120-154 (302)
366 cd07206 Pat_TGL3-4-5_SDP1 Tria 30.8 93 0.002 22.6 3.7 23 93-115 95-117 (298)
367 PF08386 Abhydrolase_4: TAP-li 30.5 1.2E+02 0.0026 17.8 4.4 42 24-65 34-76 (103)
368 TIGR02816 pfaB_fam PfaB family 30.3 82 0.0018 25.0 3.6 24 93-116 263-286 (538)
369 KOG0780 Signal recognition par 30.1 2.6E+02 0.0056 21.6 7.0 59 45-115 177-235 (483)
370 PF00578 AhpC-TSA: AhpC/TSA fa 30.0 1.2E+02 0.0027 17.8 4.5 50 10-59 12-67 (124)
371 cd01917 ACS_2 Acetyl-CoA synth 29.7 1.6E+02 0.0034 21.3 4.6 37 22-58 125-161 (287)
372 PRK05665 amidotransferase; Pro 29.3 1.2E+02 0.0026 21.2 4.0 38 75-114 72-109 (240)
373 COG0505 CarA Carbamoylphosphat 29.0 2.4E+02 0.0053 21.2 5.5 64 41-112 191-266 (368)
374 PRK01710 murD UDP-N-acetylmura 29.0 1.4E+02 0.0031 22.9 4.8 34 82-117 4-37 (458)
375 cd01979 Pchlide_reductase_N Pc 28.8 2E+02 0.0044 21.6 5.4 40 25-64 88-131 (396)
376 PF01734 Patatin: Patatin-like 28.7 68 0.0015 20.4 2.7 23 93-115 25-47 (204)
377 PRK13938 phosphoheptose isomer 28.5 1.9E+02 0.0041 19.5 4.8 25 93-117 44-68 (196)
378 COG4088 Predicted nucleotide k 28.5 79 0.0017 22.0 2.9 33 26-58 2-36 (261)
379 cd03146 GAT1_Peptidase_E Type 28.2 1.9E+02 0.0042 19.5 7.5 85 23-111 30-129 (212)
380 COG3101 Uncharacterized protei 28.1 44 0.00096 21.3 1.5 35 3-37 19-55 (180)
381 PLN03059 beta-galactosidase; P 28.0 3.8E+02 0.0083 22.9 8.6 78 30-111 51-135 (840)
382 PTZ00056 glutathione peroxidas 27.9 1.5E+02 0.0032 19.9 4.2 51 10-60 26-81 (199)
383 TIGR02113 coaC_strep phosphopa 27.7 1.9E+02 0.004 19.1 5.3 36 24-59 112-150 (177)
384 COG0324 MiaA tRNA delta(2)-iso 27.3 2.5E+02 0.0055 20.6 7.9 78 25-104 3-102 (308)
385 KOG1481 Cysteine synthase [Ami 27.2 1.6E+02 0.0034 21.5 4.2 41 25-65 215-255 (391)
386 PF00255 GSHPx: Glutathione pe 27.2 90 0.0019 18.8 2.7 57 7-64 5-66 (108)
387 cd07213 Pat17_PNPLA8_PNPLA9_li 26.9 74 0.0016 22.7 2.7 21 96-116 35-55 (288)
388 TIGR02193 heptsyl_trn_I lipopo 26.8 1.5E+02 0.0032 21.3 4.3 35 23-57 178-217 (319)
389 cd05009 SIS_GlmS_GlmD_2 SIS (S 26.7 1.6E+02 0.0034 18.2 4.1 38 24-61 62-99 (153)
390 PF10566 Glyco_hydro_97: Glyco 26.7 1.9E+02 0.004 20.8 4.6 72 35-108 29-100 (273)
391 PTZ00256 glutathione peroxidas 26.7 1.2E+02 0.0026 19.9 3.6 51 10-60 27-83 (183)
392 cd03131 GATase1_HTS Type 1 glu 26.4 57 0.0012 21.6 1.9 48 76-125 80-132 (175)
393 PF00731 AIRC: AIR carboxylase 26.3 1.9E+02 0.0041 18.7 5.5 78 25-117 1-78 (150)
394 PHA02519 plasmid partition pro 26.3 1.7E+02 0.0038 22.1 4.6 33 32-64 116-149 (387)
395 TIGR03708 poly_P_AMP_trns poly 26.3 1.2E+02 0.0025 23.9 3.8 38 23-60 297-336 (493)
396 cd01423 MGS_CPS_I_III Methylgl 26.2 1.5E+02 0.0033 17.7 3.8 23 35-57 10-32 (116)
397 COG0331 FabD (acyl-carrier-pro 26.2 60 0.0013 23.7 2.2 22 93-114 83-104 (310)
398 PF00289 CPSase_L_chain: Carba 26.1 75 0.0016 19.1 2.3 21 41-64 64-84 (110)
399 KOG1532 GTPase XAB1, interacts 26.1 2.7E+02 0.0058 20.4 9.5 35 94-128 124-158 (366)
400 COG4822 CbiK Cobalamin biosynt 25.8 1.6E+02 0.0035 20.5 4.0 35 25-59 139-175 (265)
401 PF01494 FAD_binding_3: FAD bi 25.6 90 0.0019 22.3 3.1 22 96-117 3-24 (356)
402 cd06292 PBP1_LacI_like_10 Liga 25.4 2.3E+02 0.0049 19.4 7.3 74 26-103 58-131 (273)
403 COG1312 UxuA D-mannonate dehyd 25.3 79 0.0017 23.4 2.6 27 37-63 82-109 (362)
404 PF13207 AAA_17: AAA domain; P 25.3 76 0.0016 18.7 2.3 31 27-59 1-32 (121)
405 cd01819 Patatin_and_cPLA2 Pata 25.2 1.8E+02 0.0039 18.5 4.1 19 95-113 28-46 (155)
406 cd03018 PRX_AhpE_like Peroxire 25.1 1.7E+02 0.0038 17.9 4.5 50 10-59 14-70 (149)
407 cd07204 Pat_PNPLA_like Patatin 25.0 98 0.0021 21.5 3.0 21 97-117 33-53 (243)
408 PF01738 DLH: Dienelactone hyd 25.0 2.2E+02 0.0047 19.0 6.2 64 25-90 146-214 (218)
409 PRK14538 putative bifunctional 24.9 2.9E+02 0.0063 23.5 5.9 62 49-114 320-393 (838)
410 PF13200 DUF4015: Putative gly 24.8 1.1E+02 0.0023 22.5 3.2 34 28-61 2-36 (316)
411 cd03805 GT1_ALG2_like This fam 24.7 1.4E+02 0.003 21.8 4.0 32 27-58 3-37 (392)
412 KOG0736 Peroxisome assembly fa 24.7 4.5E+02 0.0097 22.5 7.7 58 73-131 787-845 (953)
413 PRK00889 adenylylsulfate kinas 24.6 2E+02 0.0043 18.4 4.7 35 25-59 4-40 (175)
414 PF01380 SIS: SIS domain SIS d 24.5 1.7E+02 0.0036 17.5 4.4 35 24-59 54-88 (131)
415 cd05312 NAD_bind_1_malic_enz N 24.4 2.2E+02 0.0047 20.6 4.6 80 26-111 26-122 (279)
416 cd03466 Nitrogenase_NifN_2 Nit 24.4 2.8E+02 0.006 21.3 5.5 41 25-65 85-132 (429)
417 cd07217 Pat17_PNPLA8_PNPLA9_li 24.3 90 0.0019 23.1 2.8 19 97-115 43-61 (344)
418 PRK03846 adenylylsulfate kinas 24.3 2.1E+02 0.0045 18.9 4.4 37 23-59 22-60 (198)
419 PF07992 Pyr_redox_2: Pyridine 24.3 73 0.0016 20.7 2.2 21 96-116 1-21 (201)
420 PRK00726 murG undecaprenyldiph 24.0 1.2E+02 0.0027 21.9 3.5 33 27-59 5-37 (357)
421 PF00484 Pro_CA: Carbonic anhy 23.9 1.5E+02 0.0033 18.7 3.5 32 78-111 40-71 (153)
422 cd07220 Pat_PNPLA2 Patatin-lik 23.8 1.8E+02 0.004 20.4 4.1 22 96-117 37-58 (249)
423 TIGR00632 vsr DNA mismatch end 23.8 1.9E+02 0.0041 17.8 3.7 14 44-57 100-113 (117)
424 PF01580 FtsK_SpoIIIE: FtsK/Sp 23.6 2.3E+02 0.0049 18.8 5.1 33 31-63 44-82 (205)
425 PF13439 Glyco_transf_4: Glyco 23.5 71 0.0015 19.8 2.0 29 32-60 10-38 (177)
426 PF14606 Lipase_GDSL_3: GDSL-l 23.5 1.2E+02 0.0026 20.2 3.0 27 75-101 72-100 (178)
427 cd01126 TraG_VirD4 The TraG/Tr 23.1 3.1E+02 0.0066 20.5 5.5 27 38-64 36-62 (384)
428 PF09757 Arb2: Arb2 domain; I 22.7 28 0.00061 22.9 0.0 38 23-60 98-148 (178)
429 PF13380 CoA_binding_2: CoA bi 22.7 1.9E+02 0.0041 17.4 4.1 30 32-61 7-37 (116)
430 PRK13869 plasmid-partitioning 22.4 2.2E+02 0.0048 21.6 4.6 38 26-63 123-162 (405)
431 cd07221 Pat_PNPLA3 Patatin-lik 22.3 2.2E+02 0.0047 20.0 4.3 22 96-117 33-54 (252)
432 TIGR01019 sucCoAalpha succinyl 22.1 3.1E+02 0.0068 19.8 8.0 103 26-144 91-194 (286)
433 cd07211 Pat_PNPLA8 Patatin-lik 22.0 84 0.0018 22.6 2.3 18 97-114 43-60 (308)
434 TIGR00176 mobB molybdopterin-g 21.7 2.1E+02 0.0046 18.3 3.9 36 28-63 2-39 (155)
435 TIGR00959 ffh signal recogniti 21.6 3.9E+02 0.0084 20.7 6.1 20 45-64 176-195 (428)
436 cd04950 GT1_like_1 Glycosyltra 21.5 2.5E+02 0.0054 20.7 4.7 39 24-62 4-44 (373)
437 cd03145 GAT1_cyanophycinase Ty 21.5 2.7E+02 0.0059 18.9 6.3 18 95-112 116-133 (217)
438 PRK13230 nitrogenase reductase 21.5 2.8E+02 0.0061 19.5 4.8 37 26-63 3-41 (279)
439 cd02969 PRX_like1 Peroxiredoxi 21.4 2E+02 0.0044 18.4 3.8 49 11-59 12-66 (171)
440 PRK13982 bifunctional SbtC-lik 21.4 4.1E+02 0.0089 20.9 8.6 62 24-88 180-247 (475)
441 PLN02752 [acyl-carrier protein 21.3 84 0.0018 23.0 2.2 18 97-114 126-143 (343)
442 PF05973 Gp49: Phage derived p 21.3 1.7E+02 0.0037 16.5 3.1 21 13-34 52-72 (91)
443 COG1763 MobB Molybdopterin-gua 21.3 2.2E+02 0.0047 18.6 3.8 38 26-63 3-42 (161)
444 PF06414 Zeta_toxin: Zeta toxi 21.3 1.6E+02 0.0035 19.5 3.4 32 26-58 95-126 (199)
445 PF13383 Methyltransf_22: Meth 21.3 2.3E+02 0.005 19.9 4.2 36 24-59 192-227 (242)
446 COG0386 BtuE Glutathione perox 21.2 2.5E+02 0.0055 18.4 4.0 56 7-63 9-69 (162)
447 PF03575 Peptidase_S51: Peptid 21.1 57 0.0012 20.7 1.2 13 97-109 70-82 (154)
448 TIGR01287 nifH nitrogenase iro 21.1 2.8E+02 0.0061 19.4 4.8 32 32-63 7-40 (275)
449 PF10686 DUF2493: Protein of u 21.1 1.6E+02 0.0035 16.1 3.3 11 24-34 31-41 (71)
450 COG1252 Ndh NADH dehydrogenase 21.1 1.6E+02 0.0035 22.5 3.6 34 94-128 3-36 (405)
451 cd05007 SIS_Etherase N-acetylm 21.0 3.1E+02 0.0067 19.3 5.1 25 93-117 48-72 (257)
452 TIGR03371 cellulose_yhjQ cellu 21.0 2.3E+02 0.0051 19.2 4.3 38 26-63 3-42 (246)
453 PF08902 DUF1848: Domain of un 20.9 3.3E+02 0.0071 19.6 6.9 60 26-91 50-110 (266)
454 cd01523 RHOD_Lact_B Member of 20.9 1.8E+02 0.0039 16.5 4.2 27 24-54 62-88 (100)
455 cd02966 TlpA_like_family TlpA- 20.8 1.7E+02 0.0038 16.4 3.3 49 11-59 7-60 (116)
456 KOG1502 Flavonol reductase/cin 20.7 1.6E+02 0.0035 21.7 3.5 30 26-57 7-36 (327)
457 COG1255 Uncharacterized protei 20.7 1.1E+02 0.0025 18.9 2.2 20 40-59 25-44 (129)
458 TIGR01279 DPOR_bchN light-inde 20.6 3.9E+02 0.0084 20.3 5.6 42 24-65 84-129 (407)
459 TIGR01425 SRP54_euk signal rec 20.5 4.1E+02 0.0089 20.6 8.7 70 44-125 175-246 (429)
460 PLN02399 phospholipid hydroper 20.5 2.5E+02 0.0055 19.6 4.3 50 11-60 87-141 (236)
461 cd01965 Nitrogenase_MoFe_beta_ 20.5 4E+02 0.0086 20.3 6.3 29 37-65 97-130 (428)
462 PTZ00253 tryparedoxin peroxida 20.4 2.5E+02 0.0054 18.7 4.2 46 14-59 27-78 (199)
463 cd03017 PRX_BCP Peroxiredoxin 20.3 2.2E+02 0.0047 17.2 4.4 50 10-59 10-65 (140)
464 KOG1014 17 beta-hydroxysteroid 20.3 1.7E+02 0.0036 21.5 3.3 30 27-59 51-81 (312)
465 CHL00175 minD septum-site dete 20.1 3E+02 0.0065 19.4 4.7 36 25-60 16-53 (281)
466 PF00091 Tubulin: Tubulin/FtsZ 20.1 2.9E+02 0.0063 18.7 5.1 15 93-107 122-136 (216)
No 1
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.95 E-value=1.3e-26 Score=160.01 Aligned_cols=153 Identities=51% Similarity=1.041 Sum_probs=140.4
Q ss_pred CCccceeEEEECCEEEEEeecC--CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHH
Q 044507 1 MEGIQHRIVKVNGINMHIAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFH 78 (157)
Q Consensus 1 ~~~~~~~~~~~~g~~~~~~~~~--~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~ 78 (157)
++.++.++++.+|++++|...+ ++|.|+++||++....+|+.....|+.+||+|+++|+||+|.|+.+.....+++..
T Consensus 19 ~~~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~ 98 (322)
T KOG4178|consen 19 LSAISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDE 98 (322)
T ss_pred hhhcceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHH
Confidence 3567889999999999999877 67999999999999999999999999999999999999999999988778899999
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCCCCchHHHHHHHhhcCCceeeeecC
Q 044507 79 VIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPFGSINNVIEALRAYYGDNYYMCRFQ 157 (157)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (157)
.+.++..+++.+ +.++++++||+||+.+++.++..+|++++++++++.+.. .+..+........+.+.||...||
T Consensus 99 l~~di~~lld~L--g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~--~p~~~~~~~~~~~f~~~~y~~~fQ 173 (322)
T KOG4178|consen 99 LVGDIVALLDHL--GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP--NPKLKPLDSSKAIFGKSYYICLFQ 173 (322)
T ss_pred HHHHHHHHHHHh--ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC--CcccchhhhhccccCccceeEecc
Confidence 999999999999 789999999999999999999999999999999988776 566677777888889999988876
No 2
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.94 E-value=8.3e-25 Score=154.64 Aligned_cols=126 Identities=33% Similarity=0.563 Sum_probs=111.6
Q ss_pred ccceeEEEECC-----EEEEEeecCC--CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCC
Q 044507 3 GIQHRIVKVNG-----INMHIAEKGQ--GPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYT 75 (157)
Q Consensus 3 ~~~~~~~~~~g-----~~~~~~~~~~--~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~ 75 (157)
++..+++++++ .+++|...|+ +|+|||+||++++...|..++..|.++||+|+++|+||||.|..+.....++
T Consensus 18 ~~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~ 97 (302)
T PRK00870 18 PFAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYT 97 (302)
T ss_pred CCCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCC
Confidence 34568888988 8999998774 7899999999999999999999998889999999999999997654334578
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeeccc
Q 044507 76 CFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 76 ~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
.++.++++.++++++ +.++++++|||+||.++..++.++|+++++++++++..
T Consensus 98 ~~~~a~~l~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 150 (302)
T PRK00870 98 YARHVEWMRSWFEQL--DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGL 150 (302)
T ss_pred HHHHHHHHHHHHHHc--CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCC
Confidence 899999999999998 77899999999999999999999999999999998643
No 3
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=1.2e-24 Score=153.27 Aligned_cols=125 Identities=24% Similarity=0.405 Sum_probs=111.8
Q ss_pred ccceeEEEECCEEEEEeecC-CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCC-----CCCCCH
Q 044507 3 GIQHRIVKVNGINMHIAEKG-QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPD-----VTSYTC 76 (157)
Q Consensus 3 ~~~~~~~~~~g~~~~~~~~~-~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~-----~~~~~~ 76 (157)
+.++++++.++.+++|...| ++|+||++||++++...|..++..|.++ ++|+++|+||+|.|..+.. ...++.
T Consensus 7 ~~~~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~ 85 (294)
T PLN02824 7 QVETRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTF 85 (294)
T ss_pred CCCCceEEEcCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCH
Confidence 34578899999999999887 4799999999999999999999999987 7999999999999976531 135789
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeeccc
Q 044507 77 FHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 77 ~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
++.+.++.++++.+ ..++++++||||||.+++.++.++|++++++|++++..
T Consensus 86 ~~~a~~l~~~l~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 86 ETWGEQLNDFCSDV--VGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHHHHHHHh--cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 99999999999998 67899999999999999999999999999999998754
No 4
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.93 E-value=3e-24 Score=151.25 Aligned_cols=122 Identities=37% Similarity=0.608 Sum_probs=111.7
Q ss_pred cceeEEEECCEEEEEeecCCCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 044507 4 IQHRIVKVNGINMHIAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDL 83 (157)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l 83 (157)
++.++++.+|.+++|...|++|+||++||++++...|..+...|.++ ++|+++|+||+|.|+.+. ..++..+.++++
T Consensus 7 ~~~~~~~~~g~~i~y~~~G~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~--~~~~~~~~a~dl 83 (295)
T PRK03592 7 GEMRRVEVLGSRMAYIETGEGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD--IDYTFADHARYL 83 (295)
T ss_pred CcceEEEECCEEEEEEEeCCCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC--CCCCHHHHHHHH
Confidence 45677889999999999999999999999999999999999999988 599999999999998764 357889999999
Q ss_pred HHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeeccc
Q 044507 84 VGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 84 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
.++++++ +.++++++|||+||.+++.++.++|++++++|++++..
T Consensus 84 ~~ll~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 128 (295)
T PRK03592 84 DAWFDAL--GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128 (295)
T ss_pred HHHHHHh--CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCC
Confidence 9999999 67899999999999999999999999999999999743
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.91 E-value=1.6e-23 Score=146.39 Aligned_cols=122 Identities=20% Similarity=0.302 Sum_probs=107.0
Q ss_pred ceeEEEECCEEEEEeec--CCC-CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHH
Q 044507 5 QHRIVKVNGINMHIAEK--GQG-PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIG 81 (157)
Q Consensus 5 ~~~~~~~~g~~~~~~~~--~~~-p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~ 81 (157)
.-+++.++|.+++|... +++ ++|||+||++++...|.++++.|.+. |+|+++|+||+|.|+.+. ...+.+..++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~ 79 (276)
T TIGR02240 3 IFRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDPD-LEVIAFDVPGVGGSSTPR--HPYRFPGLAK 79 (276)
T ss_pred eEEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhccC-ceEEEECCCCCCCCCCCC--CcCcHHHHHH
Confidence 34678889999999753 333 79999999999999999999999875 999999999999997653 3567889999
Q ss_pred HHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 82 DLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 82 ~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
++.++++.+ +.++++++||||||.+++.++.++|++++++|+++++..
T Consensus 80 ~~~~~i~~l--~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 80 LAARMLDYL--DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAG 127 (276)
T ss_pred HHHHHHHHh--CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCc
Confidence 999999998 778999999999999999999999999999999998754
No 6
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.91 E-value=1e-22 Score=142.99 Aligned_cols=124 Identities=28% Similarity=0.498 Sum_probs=109.9
Q ss_pred ccceeEEEECCEEEEEeecCCCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHH
Q 044507 3 GIQHRIVKVNGINMHIAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGD 82 (157)
Q Consensus 3 ~~~~~~~~~~g~~~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~ 82 (157)
.+++..+++++.+++|...|++|+|||+||++.+...|..+...|.+. |+|+++|+||+|.|..+.+ ..++.++.+.+
T Consensus 13 ~~~~~~~~~~~~~i~y~~~G~~~~iv~lHG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~ 90 (286)
T PRK03204 13 PFESRWFDSSRGRIHYIDEGTGPPILLCHGNPTWSFLYRDIIVALRDR-FRCVAPDYLGFGLSERPSG-FGYQIDEHARV 90 (286)
T ss_pred cccceEEEcCCcEEEEEECCCCCEEEEECCCCccHHHHHHHHHHHhCC-cEEEEECCCCCCCCCCCCc-cccCHHHHHHH
Confidence 367788999999999999998899999999999888999999888765 9999999999999976542 24678888999
Q ss_pred HHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeeccc
Q 044507 83 LVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 83 l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
+..+++.+ +.++++++||||||.+++.++..+|++++++|++++..
T Consensus 91 ~~~~~~~~--~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 91 IGEFVDHL--GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred HHHHHHHh--CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 99999988 77899999999999999999999999999999987654
No 7
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.89 E-value=4.6e-22 Score=139.11 Aligned_cols=122 Identities=28% Similarity=0.431 Sum_probs=98.0
Q ss_pred ceeEEEEC-----CEEEEEeecCCCCEEEEeCCCCCchhhHHHH---HHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCH
Q 044507 5 QHRIVKVN-----GINMHIAEKGQGPVILFLHGFPELWYSWRHQ---ITALASLGYRAVAPDLRGFGDTDAPPDVTSYTC 76 (157)
Q Consensus 5 ~~~~~~~~-----g~~~~~~~~~~~p~vl~~hG~~~~~~~~~~~---~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~ 76 (157)
..+++.++ +..++|...+++|+||++||++++...|... +..+.+.||+|+++|+||+|.|+.........
T Consensus 6 ~~~~~~~~~~~~~~~~~~y~~~g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~- 84 (282)
T TIGR03343 6 TSKFVKINEKGLSNFRIHYNEAGNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRG- 84 (282)
T ss_pred cceEEEcccccccceeEEEEecCCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCccccc-
Confidence 34555554 5779999888899999999999887777543 45666778999999999999997643111112
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecc
Q 044507 77 FHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVV 129 (157)
Q Consensus 77 ~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~ 129 (157)
...++++.++++.+ +.++++++||||||.+++.++.++|++++++|+++++
T Consensus 85 ~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 135 (282)
T TIGR03343 85 LVNARAVKGLMDAL--DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPG 135 (282)
T ss_pred chhHHHHHHHHHHc--CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCC
Confidence 13577888999888 7789999999999999999999999999999999875
No 8
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.89 E-value=6.2e-22 Score=143.07 Aligned_cols=120 Identities=29% Similarity=0.448 Sum_probs=104.6
Q ss_pred eEEEECCE-EEEEeecCCC------CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHH
Q 044507 7 RIVKVNGI-NMHIAEKGQG------PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHV 79 (157)
Q Consensus 7 ~~~~~~g~-~~~~~~~~~~------p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~ 79 (157)
+.+..+|. +++|...|++ |+||++||++++...|.+++..|.+ +|+|+.+|+||+|.|..+.. ..++.+++
T Consensus 64 ~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-~~~~~~~~ 141 (360)
T PLN02679 64 KKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG-FSYTMETW 141 (360)
T ss_pred ceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC-ccccHHHH
Confidence 56667777 9999987765 9999999999999999999999987 59999999999999976542 35788899
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHh-cCccceeEEEEeeccc
Q 044507 80 IGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCL-FRPDRVKALVNLSVVF 130 (157)
Q Consensus 80 ~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~-~~~~~~~~~i~~~~~~ 130 (157)
++++.++++.+ ..++++++|||+||.+++.++. .+|++++++|+++++.
T Consensus 142 a~~l~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 142 AELILDFLEEV--VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAG 191 (360)
T ss_pred HHHHHHHHHHh--cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcc
Confidence 99999999998 6789999999999999998887 4799999999998754
No 9
>PLN02578 hydrolase
Probab=99.89 E-value=9.6e-22 Score=141.85 Aligned_cols=118 Identities=27% Similarity=0.448 Sum_probs=105.6
Q ss_pred eEEEECCEEEEEeecCCCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 044507 7 RIVKVNGINMHIAEKGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGL 86 (157)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~ 86 (157)
.....+|.+++|...+++|+||++||++++...|..++..|.++ |.|+++|+||+|.|+.+. ..++.....+++.++
T Consensus 69 ~~~~~~~~~i~Y~~~g~g~~vvliHG~~~~~~~w~~~~~~l~~~-~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~l~~~ 145 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGEGLPIVLIHGFGASAFHWRYNIPELAKK-YKVYALDLLGFGWSDKAL--IEYDAMVWRDQVADF 145 (354)
T ss_pred eEEEECCEEEEEEEcCCCCeEEEECCCCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCCcc--cccCHHHHHHHHHHH
Confidence 55677899999999888999999999999999999998888765 999999999999997654 457888888999999
Q ss_pred HHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecc
Q 044507 87 IDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVV 129 (157)
Q Consensus 87 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~ 129 (157)
++.+ ..++++++|||+||.+++.++.++|++++++++++++
T Consensus 146 i~~~--~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~ 186 (354)
T PLN02578 146 VKEV--VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSA 186 (354)
T ss_pred HHHh--ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCC
Confidence 9988 5689999999999999999999999999999998764
No 10
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.89 E-value=1.2e-21 Score=136.38 Aligned_cols=123 Identities=33% Similarity=0.449 Sum_probs=108.4
Q ss_pred ceeEEEECCEEEEEeecCC--CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHH
Q 044507 5 QHRIVKVNGINMHIAEKGQ--GPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGD 82 (157)
Q Consensus 5 ~~~~~~~~g~~~~~~~~~~--~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~ 82 (157)
..+.+.+++..++|...++ +|+||++||++++...|..+...|.+. |+|+++|+||+|.|..+.. ...+.+..+++
T Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~ 84 (278)
T TIGR03056 7 CSRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLARS-FRVVAPDLPGHGFTRAPFR-FRFTLPSMAED 84 (278)
T ss_pred ccceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhhC-cEEEeecCCCCCCCCCccc-cCCCHHHHHHH
Confidence 4678899999999998774 689999999999999999999999875 9999999999999876542 35788999999
Q ss_pred HHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 83 LVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 83 l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
+.++++.+ +.++++++|||+||.+++.++.++|+++++++++++...
T Consensus 85 l~~~i~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~ 131 (278)
T TIGR03056 85 LSALCAAE--GLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALM 131 (278)
T ss_pred HHHHHHHc--CCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccc
Confidence 99999987 667899999999999999999999999999999987554
No 11
>PRK10749 lysophospholipase L2; Provisional
Probab=99.88 E-value=2.7e-21 Score=138.35 Aligned_cols=127 Identities=17% Similarity=0.226 Sum_probs=106.1
Q ss_pred ceeEEEECCEEEEEeecC---CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCC----CCCCHH
Q 044507 5 QHRIVKVNGINMHIAEKG---QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDV----TSYTCF 77 (157)
Q Consensus 5 ~~~~~~~~g~~~~~~~~~---~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~----~~~~~~ 77 (157)
+..++..+|.+++|...+ .+++||++||++++...|..++..+.++||.|+.+|+||+|.|...... ...+.+
T Consensus 32 ~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~ 111 (330)
T PRK10749 32 EAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFN 111 (330)
T ss_pred ceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHH
Confidence 456677799999998754 3579999999999888899999999999999999999999998754211 124788
Q ss_pred HHHHHHHHHHHHhCC--CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 78 HVIGDLVGLIDTVAP--NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 78 ~~~~~l~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
+.++++..+++.+.. +..+++++||||||.+++.++.++|+.++++|+++|...
T Consensus 112 ~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~ 167 (330)
T PRK10749 112 DYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFG 167 (330)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhc
Confidence 889999998887532 457899999999999999999999999999999988654
No 12
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.88 E-value=2.1e-21 Score=135.54 Aligned_cols=120 Identities=20% Similarity=0.306 Sum_probs=102.2
Q ss_pred EECCEEEEEeec-CCCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 044507 10 KVNGINMHIAEK-GQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLID 88 (157)
Q Consensus 10 ~~~g~~~~~~~~-~~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~ 88 (157)
+-||-++.|.++ +++|+|||+||++.+...|.++...|.++||+|+++|+||+|.+..... ...+.++.++++.++++
T Consensus 3 ~~~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~-~~~~~~~~~~~l~~~i~ 81 (273)
T PLN02211 3 EENGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD-SVTTFDEYNKPLIDFLS 81 (273)
T ss_pred cccccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcc-cCCCHHHHHHHHHHHHH
Confidence 346778888776 6779999999999999999999999998899999999999998743321 24788889999999999
Q ss_pred HhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 89 TVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 89 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
.+. ..++++++||||||.++..++..+|++++++|++++...
T Consensus 82 ~l~-~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~ 123 (273)
T PLN02211 82 SLP-ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATML 123 (273)
T ss_pred hcC-CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccC
Confidence 873 247999999999999999999999999999999977543
No 13
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=5.3e-21 Score=136.81 Aligned_cols=124 Identities=17% Similarity=0.314 Sum_probs=98.6
Q ss_pred eEEEECCEEEEEeecC------CCCEEEEeCCCCCch-hhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHH
Q 044507 7 RIVKVNGINMHIAEKG------QGPVILFLHGFPELW-YSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHV 79 (157)
Q Consensus 7 ~~~~~~g~~~~~~~~~------~~p~vl~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~ 79 (157)
.+...||.+++|.... .+++||++||++.+. ..|..+...|.++||+|+++|+||||.|..... ...+.+..
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~~ 114 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA-YVPNVDLV 114 (330)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccc-cCCCHHHH
Confidence 4444589999986532 245799999998654 356777888999999999999999999865332 23567788
Q ss_pred HHHHHHHHHHhCC----CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 80 IGDLVGLIDTVAP----NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 80 ~~~l~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
++++..+++.+.. ...+++++||||||.+++.++.++|++++++|++++...
T Consensus 115 ~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 115 VEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCK 170 (330)
T ss_pred HHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEeccccc
Confidence 8899999988743 134799999999999999999999999999999988654
No 14
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.87 E-value=3.6e-21 Score=138.66 Aligned_cols=124 Identities=17% Similarity=0.247 Sum_probs=100.5
Q ss_pred eEEEECCEEEEEeecC-----CCCEEEEeCCCCCchhh-HHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHH
Q 044507 7 RIVKVNGINMHIAEKG-----QGPVILFLHGFPELWYS-WRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVI 80 (157)
Q Consensus 7 ~~~~~~g~~~~~~~~~-----~~p~vl~~hG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~ 80 (157)
..++.+|.++++..+. .+++|||+||++++... |..++..|.++||+|+++|+||||.|..... ...+..+.+
T Consensus 65 ~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-~~~~~~~~~ 143 (349)
T PLN02385 65 YEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHG-YIPSFDDLV 143 (349)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-CcCCHHHHH
Confidence 3455688899876543 24689999999887654 5788899999999999999999999976432 235778888
Q ss_pred HHHHHHHHHhCC----CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 81 GDLVGLIDTVAP----NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 81 ~~l~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
+++.++++.+.. ...+++++||||||.+++.++.++|++++++|+++|...
T Consensus 144 ~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~ 198 (349)
T PLN02385 144 DDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCK 198 (349)
T ss_pred HHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccc
Confidence 899988887742 234799999999999999999999999999999997654
No 15
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.87 E-value=1.1e-20 Score=136.92 Aligned_cols=122 Identities=29% Similarity=0.434 Sum_probs=107.6
Q ss_pred eEEEECCEEEEEeecCC--CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCC--CCCCCHHHHHHH
Q 044507 7 RIVKVNGINMHIAEKGQ--GPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPD--VTSYTCFHVIGD 82 (157)
Q Consensus 7 ~~~~~~g~~~~~~~~~~--~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~--~~~~~~~~~~~~ 82 (157)
..+..++.+++|...|+ +|+||++||++++...|..++..|.+ +|+|+++|+||+|.|..+.. ...++..+++++
T Consensus 108 ~~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~ 186 (383)
T PLN03084 108 SQASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSS 186 (383)
T ss_pred eEEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHH
Confidence 34567899999998773 68999999999999999999999986 59999999999999976542 135789999999
Q ss_pred HHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 83 LVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 83 l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
+.++++.+ ..++++++|||+||.+++.++.++|++++++|+++++..
T Consensus 187 l~~~i~~l--~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 187 LESLIDEL--KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred HHHHHHHh--CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCc
Confidence 99999999 678999999999999999999999999999999998754
No 16
>PLN02965 Probable pheophorbidase
Probab=99.87 E-value=3.9e-21 Score=132.92 Aligned_cols=102 Identities=21% Similarity=0.292 Sum_probs=91.0
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC-CcEEEEEEcH
Q 044507 26 VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPND-EKVFVVGHDW 104 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~i~l~G~S~ 104 (157)
+|||+||++.+...|..++..|.+.+|+|+++|+||+|.|..... ...+.++.++++.++++.+ +. ++++++||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l--~~~~~~~lvGhSm 81 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPLFALLSDL--PPDHKVILVGHSI 81 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHHHHHHHhc--CCCCCEEEEecCc
Confidence 599999999999999999999988889999999999999965432 3567889999999999998 55 5999999999
Q ss_pred HHHHHHHHHhcCccceeEEEEeeccc
Q 044507 105 GAFMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 105 Gg~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
||.+++.++.++|++++++|++++..
T Consensus 82 GG~ia~~~a~~~p~~v~~lvl~~~~~ 107 (255)
T PLN02965 82 GGGSVTEALCKFTDKISMAIYVAAAM 107 (255)
T ss_pred chHHHHHHHHhCchheeEEEEEcccc
Confidence 99999999999999999999998753
No 17
>PHA02857 monoglyceride lipase; Provisional
Probab=99.86 E-value=1.1e-20 Score=131.97 Aligned_cols=124 Identities=18% Similarity=0.239 Sum_probs=98.9
Q ss_pred EEEECCEEEEEeecC----CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 044507 8 IVKVNGINMHIAEKG----QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDL 83 (157)
Q Consensus 8 ~~~~~g~~~~~~~~~----~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l 83 (157)
++..||..++|..+. .++.|+++||++++...|..+++.|.++||.|+++|+||||.|.... ....+..+..+++
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~-~~~~~~~~~~~d~ 83 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEK-MMIDDFGVYVRDV 83 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc-CCcCCHHHHHHHH
Confidence 456689999886432 23567777999999999999999999999999999999999986532 1234556667777
Q ss_pred HHHHHHhCC--CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 84 VGLIDTVAP--NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 84 ~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
.+.++.+.. ...+++++|||+||.+++.++.++|+.++++|+++|....
T Consensus 84 ~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~ 134 (276)
T PHA02857 84 VQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNA 134 (276)
T ss_pred HHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccc
Confidence 777765532 3468999999999999999999999999999999986553
No 18
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.86 E-value=5.1e-20 Score=136.24 Aligned_cols=124 Identities=23% Similarity=0.377 Sum_probs=101.9
Q ss_pred ceeEEEECCEEEEEeecCC-----CCEEEEeCCCCCchhhHHH-HHHHHH---hCCCEEEecCCCCCCCCCCCCCCCCCC
Q 044507 5 QHRIVKVNGINMHIAEKGQ-----GPVILFLHGFPELWYSWRH-QITALA---SLGYRAVAPDLRGFGDTDAPPDVTSYT 75 (157)
Q Consensus 5 ~~~~~~~~g~~~~~~~~~~-----~p~vl~~hG~~~~~~~~~~-~~~~l~---~~g~~v~~~d~~g~g~s~~~~~~~~~~ 75 (157)
....+..++.+++|...++ +|+|||+||++++...|.. +...+. +++|+|+++|+||||.|..+.+ ..++
T Consensus 177 ~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~-~~yt 255 (481)
T PLN03087 177 CTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD-SLYT 255 (481)
T ss_pred eeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC-CcCC
Confidence 3456677888999887552 4799999999999988975 335554 3689999999999999976532 3478
Q ss_pred HHHHHHHHH-HHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 76 CFHVIGDLV-GLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 76 ~~~~~~~l~-~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
.++.++++. .+++.+ +.++++++||||||.+++.++.++|++++++++++++..
T Consensus 256 l~~~a~~l~~~ll~~l--g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~ 310 (481)
T PLN03087 256 LREHLEMIERSVLERY--KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYY 310 (481)
T ss_pred HHHHHHHHHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCcc
Confidence 888888884 788887 778999999999999999999999999999999987654
No 19
>PRK06489 hypothetical protein; Provisional
Probab=99.86 E-value=6.6e-21 Score=137.79 Aligned_cols=118 Identities=21% Similarity=0.340 Sum_probs=94.9
Q ss_pred EECCEEEEEeecCC---------CCEEEEeCCCCCchhhHH--HHHHHH-------HhCCCEEEecCCCCCCCCCCCCCC
Q 044507 10 KVNGINMHIAEKGQ---------GPVILFLHGFPELWYSWR--HQITAL-------ASLGYRAVAPDLRGFGDTDAPPDV 71 (157)
Q Consensus 10 ~~~g~~~~~~~~~~---------~p~vl~~hG~~~~~~~~~--~~~~~l-------~~~g~~v~~~d~~g~g~s~~~~~~ 71 (157)
.++|.+++|...|+ +|+||++||++++...|. .+.+.+ ..++|+|+++|+||||.|..+.+.
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 45789999998875 789999999999887775 455444 135699999999999998765321
Q ss_pred -----CCCCHHHHHHHHHHHH-HHhCCCCCcEE-EEEEcHHHHHHHHHHhcCccceeEEEEeecc
Q 044507 72 -----TSYTCFHVIGDLVGLI-DTVAPNDEKVF-VVGHDWGAFMAWFLCLFRPDRVKALVNLSVV 129 (157)
Q Consensus 72 -----~~~~~~~~~~~l~~~~-~~~~~~~~~i~-l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~ 129 (157)
..++.++.++++...+ +.+ +.+++. ++||||||.+++.++.++|++++++|++++.
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~l--gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGL--GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhc--CCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 1467788888877754 666 667875 8999999999999999999999999999765
No 20
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.86 E-value=1.1e-20 Score=127.10 Aligned_cols=102 Identities=43% Similarity=0.634 Sum_probs=92.1
Q ss_pred EEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHH
Q 044507 27 ILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGA 106 (157)
Q Consensus 27 vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg 106 (157)
||++||++++...|..+++.|+ +||.|+++|+||+|.|.........+.++.+.++.++++.+ ..++++++|||+||
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~lvG~S~Gg 77 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL--GIKKVILVGHSMGG 77 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT--TTSSEEEEEETHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc--cccccccccccccc
Confidence 7999999999999999999995 78999999999999998765434678899999999999999 66899999999999
Q ss_pred HHHHHHHhcCccceeEEEEeecccC
Q 044507 107 FMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 107 ~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
.+++.++.++|++++++++++++..
T Consensus 78 ~~a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 78 MIALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp HHHHHHHHHSGGGEEEEEEESESSS
T ss_pred ccccccccccccccccceeeccccc
Confidence 9999999999999999999998875
No 21
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.86 E-value=1.7e-20 Score=129.36 Aligned_cols=101 Identities=22% Similarity=0.320 Sum_probs=91.3
Q ss_pred CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 044507 23 QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGH 102 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~ 102 (157)
++|+||++||++++...|..++..|.+. |.|+.+|+||+|.|.... ..+..+.++++.++++.+ +.++++++||
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~s~~~~---~~~~~~~~~d~~~~l~~l--~~~~~~lvGh 88 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGVLARDLVND-HDIIQVDMRNHGLSPRDP---VMNYPAMAQDLLDTLDAL--QIEKATFIGH 88 (255)
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHhhC-CeEEEECCCCCCCCCCCC---CCCHHHHHHHHHHHHHHc--CCCceEEEEE
Confidence 5689999999999999999999999875 999999999999987643 468889999999999998 6678999999
Q ss_pred cHHHHHHHHHHhcCccceeEEEEeecc
Q 044507 103 DWGAFMAWFLCLFRPDRVKALVNLSVV 129 (157)
Q Consensus 103 S~Gg~~a~~~~~~~~~~~~~~i~~~~~ 129 (157)
||||.+++.++..+|+++++++++++.
T Consensus 89 S~Gg~va~~~a~~~~~~v~~lvli~~~ 115 (255)
T PRK10673 89 SMGGKAVMALTALAPDRIDKLVAIDIA 115 (255)
T ss_pred CHHHHHHHHHHHhCHhhcceEEEEecC
Confidence 999999999999999999999998753
No 22
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.85 E-value=2e-20 Score=128.19 Aligned_cols=100 Identities=22% Similarity=0.206 Sum_probs=88.7
Q ss_pred CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEc
Q 044507 24 GPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHD 103 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S 103 (157)
+|+||++||++++...|..+...| + +|+|+++|+||+|.|..+. ..+.++.++++.++++.+ +.++++++|||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~~--~~~~~~lvG~S 74 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS---VDGFADVSRLLSQTLQSY--NILPYWLVGYS 74 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc---ccCHHHHHHHHHHHHHHc--CCCCeEEEEEC
Confidence 689999999999999999999988 3 5999999999999997654 247888999999999998 77899999999
Q ss_pred HHHHHHHHHHhcCccc-eeEEEEeeccc
Q 044507 104 WGAFMAWFLCLFRPDR-VKALVNLSVVF 130 (157)
Q Consensus 104 ~Gg~~a~~~~~~~~~~-~~~~i~~~~~~ 130 (157)
|||.+++.++.++|+. +++++++++..
T Consensus 75 ~Gg~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 75 LGGRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred HHHHHHHHHHHhCCcccccEEEEeCCCC
Confidence 9999999999998654 99999887654
No 23
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.85 E-value=1.7e-20 Score=129.67 Aligned_cols=105 Identities=27% Similarity=0.406 Sum_probs=88.0
Q ss_pred EEEEeecCCCC-EEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 044507 15 NMHIAEKGQGP-VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPN 93 (157)
Q Consensus 15 ~~~~~~~~~~p-~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 93 (157)
.++|...|+++ +|||+||++++...|..+...|.+. |+|+++|+||+|.|.... ..+..+.++++. .+ .
T Consensus 3 ~~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~---~~~~~~~~~~l~----~~--~ 72 (256)
T PRK10349 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGFG---ALSLADMAEAVL----QQ--A 72 (256)
T ss_pred ccchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCCC---CCCHHHHHHHHH----hc--C
Confidence 36677778775 6999999999999999999999876 999999999999987542 356665555544 33 4
Q ss_pred CCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecc
Q 044507 94 DEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVV 129 (157)
Q Consensus 94 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~ 129 (157)
.++++++||||||.+++.++.++|++++++|+++++
T Consensus 73 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~ 108 (256)
T PRK10349 73 PDKAIWLGWSLGGLVASQIALTHPERVQALVTVASS 108 (256)
T ss_pred CCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCc
Confidence 579999999999999999999999999999999764
No 24
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.85 E-value=3.7e-20 Score=127.16 Aligned_cols=105 Identities=27% Similarity=0.461 Sum_probs=92.6
Q ss_pred CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 044507 23 QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGH 102 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~ 102 (157)
++|+||++||++++...|...+..+.+ +|+|+++|+||+|.|..... ..++..+.++++.++++.+ +.+++.++||
T Consensus 12 ~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~i~~~--~~~~~~l~G~ 87 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELP-PGYSIAHMADDVLQLLDAL--NIERFHFVGH 87 (257)
T ss_pred CCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCc-ccCCHHHHHHHHHHHHHHh--CCCcEEEEEe
Confidence 468999999999999999988888876 59999999999999875432 4578899999999999998 6789999999
Q ss_pred cHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 103 DWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 103 S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
|+||.+++.++.++|++++++|++++...
T Consensus 88 S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~ 116 (257)
T TIGR03611 88 ALGGLIGLQLALRYPERLLSLVLINAWSR 116 (257)
T ss_pred chhHHHHHHHHHHChHHhHHheeecCCCC
Confidence 99999999999999999999999987544
No 25
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.85 E-value=7.6e-20 Score=127.33 Aligned_cols=122 Identities=24% Similarity=0.356 Sum_probs=98.6
Q ss_pred eEEEECCEEEEEeecC---CCCEEEEeCCCCCchhh-HHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCC-CCCHHHHHH
Q 044507 7 RIVKVNGINMHIAEKG---QGPVILFLHGFPELWYS-WRHQITALASLGYRAVAPDLRGFGDTDAPPDVT-SYTCFHVIG 81 (157)
Q Consensus 7 ~~~~~~g~~~~~~~~~---~~p~vl~~hG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~-~~~~~~~~~ 81 (157)
.++++++..+.|...+ ++|+||++||++++... |..+...+.+.||.|+++|+||+|.|..+.... ..+.++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~ 84 (288)
T TIGR01250 5 GIITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVD 84 (288)
T ss_pred ceecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHH
Confidence 4677788888887654 35799999998665544 455666666668999999999999987653222 377889999
Q ss_pred HHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeeccc
Q 044507 82 DLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 82 ~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
++.++++.+ +.++++++|||+||.+++.++.++|+++++++++++..
T Consensus 85 ~~~~~~~~~--~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 85 ELEEVREKL--GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred HHHHHHHHc--CCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 999999988 66789999999999999999999999999999987654
No 26
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.85 E-value=5.7e-20 Score=130.27 Aligned_cols=124 Identities=22% Similarity=0.321 Sum_probs=99.0
Q ss_pred ceeEEEE-CCEEEEEeecCC--CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHH
Q 044507 5 QHRIVKV-NGINMHIAEKGQ--GPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIG 81 (157)
Q Consensus 5 ~~~~~~~-~g~~~~~~~~~~--~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~ 81 (157)
...++.. +|.+++|...++ +++||++||++++...+ .....+...+|+|+++|+||+|.|.........+..+...
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 83 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVA 83 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHH
Confidence 3455565 578999988774 68999999987765443 3344455567999999999999997654333456778888
Q ss_pred HHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 82 DLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 82 ~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
++..+++.+ +.++++++||||||.+++.++.++|++++++|++++...
T Consensus 84 dl~~l~~~l--~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 84 DIEKLREKL--GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 999999888 668899999999999999999999999999999987543
No 27
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.84 E-value=1.1e-19 Score=123.79 Aligned_cols=105 Identities=32% Similarity=0.535 Sum_probs=91.2
Q ss_pred CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCCCCCcEEEEEE
Q 044507 24 GPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGD-LVGLIDTVAPNDEKVFVVGH 102 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~i~l~G~ 102 (157)
+|+||++||++++...|..+.+.|. +||.|+.+|+||+|.|..+......+..+.+.+ +..+++.+ +.+++.++||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~ 77 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL--GIEPFFLVGY 77 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc--CCCeEEEEEe
Confidence 4799999999999999999999998 689999999999999976554456677778877 66677776 6689999999
Q ss_pred cHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 103 DWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 103 S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
|+||.+++.++.++|+.+++++++++...
T Consensus 78 S~Gg~ia~~~a~~~~~~v~~lil~~~~~~ 106 (251)
T TIGR03695 78 SMGGRIALYYALQYPERVQGLILESGSPG 106 (251)
T ss_pred ccHHHHHHHHHHhCchheeeeEEecCCCC
Confidence 99999999999999999999999987543
No 28
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.84 E-value=2.3e-19 Score=126.34 Aligned_cols=130 Identities=23% Similarity=0.332 Sum_probs=109.4
Q ss_pred ceeEEEECCEEEEEeecCC---C-CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHH
Q 044507 5 QHRIVKVNGINMHIAEKGQ---G-PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVI 80 (157)
Q Consensus 5 ~~~~~~~~g~~~~~~~~~~---~-p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~ 80 (157)
+......++..++|..... . .+||++||.+....-|..+++.|..+||.|+.+|+||||.|.........+..+..
T Consensus 11 ~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~ 90 (298)
T COG2267 11 EGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYV 90 (298)
T ss_pred cceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHH
Confidence 4456667899999886542 1 58999999999999999999999999999999999999999731111344578888
Q ss_pred HHHHHHHHHhCC--CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCCC
Q 044507 81 GDLVGLIDTVAP--NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPFG 134 (157)
Q Consensus 81 ~~l~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~ 134 (157)
.++..+++.... ...+++++||||||.+++.++..++..++++|+.+|.+....
T Consensus 91 ~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~ 146 (298)
T COG2267 91 DDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG 146 (298)
T ss_pred HHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh
Confidence 899999988864 468999999999999999999999999999999999887653
No 29
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.83 E-value=3.6e-20 Score=133.17 Aligned_cols=117 Identities=20% Similarity=0.284 Sum_probs=94.1
Q ss_pred EEECCEEEEEeecCC-CCEEEEeCCCCCchh------------hHHHHHH---HHHhCCCEEEecCCCCCCCCCCCCCCC
Q 044507 9 VKVNGINMHIAEKGQ-GPVILFLHGFPELWY------------SWRHQIT---ALASLGYRAVAPDLRGFGDTDAPPDVT 72 (157)
Q Consensus 9 ~~~~g~~~~~~~~~~-~p~vl~~hG~~~~~~------------~~~~~~~---~l~~~g~~v~~~d~~g~g~s~~~~~~~ 72 (157)
...++.+++|...|+ ++++|++||+.++.. .|.+++. .|...+|+|+++|+||+|.+.. .
T Consensus 41 ~~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~----~ 116 (343)
T PRK08775 41 AGLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD----V 116 (343)
T ss_pred CCCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC----C
Confidence 344788999998884 667778877766554 5777775 4644469999999999998743 2
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCc-EEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 73 SYTCFHVIGDLVGLIDTVAPNDEK-VFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 73 ~~~~~~~~~~l~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
.++..+.++++.++++.+ +.++ ++++||||||++++.++.++|++++++|++++...
T Consensus 117 ~~~~~~~a~dl~~ll~~l--~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~ 174 (343)
T PRK08775 117 PIDTADQADAIALLLDAL--GIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHR 174 (343)
T ss_pred CCCHHHHHHHHHHHHHHc--CCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcccc
Confidence 356788899999999998 6656 57999999999999999999999999999987643
No 30
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.83 E-value=6.2e-20 Score=125.24 Aligned_cols=111 Identities=30% Similarity=0.497 Sum_probs=94.7
Q ss_pred EEEeecC---CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 044507 16 MHIAEKG---QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP 92 (157)
Q Consensus 16 ~~~~~~~---~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~ 92 (157)
++|...+ ++|+||++||++.+...|..+++.|.+ ||+|+++|+||+|.|.... ...+..+.++++.++++.+
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~-- 76 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPE--GPYSIEDLADDVLALLDHL-- 76 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHh--
Confidence 4555444 357999999999999999999988864 6999999999999986543 4568889999999999988
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
+.+++.++|||+||.+++.++.++|++++++++++++..
T Consensus 77 ~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 115 (251)
T TIGR02427 77 GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAK 115 (251)
T ss_pred CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccc
Confidence 668999999999999999999999999999999886543
No 31
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.82 E-value=7.9e-19 Score=127.21 Aligned_cols=119 Identities=24% Similarity=0.374 Sum_probs=102.9
Q ss_pred eEEEECCEEEEEeecC--CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 044507 7 RIVKVNGINMHIAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLV 84 (157)
Q Consensus 7 ~~~~~~g~~~~~~~~~--~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~ 84 (157)
..+.+++..++|...+ ++|+||++||++++...|..+...|.+. |+|+++|+||+|.+.... ...+..+.+.++.
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~ 188 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKAV--GAGSLDELAAAVL 188 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCCC--CCCCHHHHHHHHH
Confidence 4566778888887766 3689999999999999999999988876 999999999999986543 3567888899999
Q ss_pred HHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeeccc
Q 044507 85 GLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 85 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
++++.+ +..++.++|||+||.+++.++..+|+++.++++++++.
T Consensus 189 ~~~~~~--~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~ 232 (371)
T PRK14875 189 AFLDAL--GIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAG 232 (371)
T ss_pred HHHHhc--CCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCC
Confidence 999888 67799999999999999999999999999999998753
No 32
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.82 E-value=7.4e-19 Score=121.54 Aligned_cols=108 Identities=20% Similarity=0.142 Sum_probs=86.7
Q ss_pred CCEEEEeCCCCCc----hhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCCcEE
Q 044507 24 GPVILFLHGFPEL----WYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP-NDEKVF 98 (157)
Q Consensus 24 ~p~vl~~hG~~~~----~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~i~ 98 (157)
.|+||++||+++. ...|..+++.|+++||.|+.+|+||+|.|.... ...+...+.+++...++.+.. +..+++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~--~~~~~~~~~~Dv~~ai~~L~~~~~~~v~ 102 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF--AAARWDVWKEDVAAAYRWLIEQGHPPVT 102 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc--ccCCHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 4689999999864 345677789999999999999999999986543 234566677777766655532 457999
Q ss_pred EEEEcHHHHHHHHHHhcCccceeEEEEeecccCCC
Q 044507 99 VVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPF 133 (157)
Q Consensus 99 l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~ 133 (157)
++||||||.+++.++.++|++++++|+++|.....
T Consensus 103 LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGK 137 (266)
T ss_pred EEEECHHHHHHHHHHHhCccccceEEEeccccchH
Confidence 99999999999999999999999999999876643
No 33
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.81 E-value=3.1e-19 Score=128.75 Aligned_cols=120 Identities=23% Similarity=0.300 Sum_probs=96.2
Q ss_pred EECCEEEEEeecCC-----CCEEEEeCCCCCchh-----------hHHHHH---HHHHhCCCEEEecCCCC--CCCCCCC
Q 044507 10 KVNGINMHIAEKGQ-----GPVILFLHGFPELWY-----------SWRHQI---TALASLGYRAVAPDLRG--FGDTDAP 68 (157)
Q Consensus 10 ~~~g~~~~~~~~~~-----~p~vl~~hG~~~~~~-----------~~~~~~---~~l~~~g~~v~~~d~~g--~g~s~~~ 68 (157)
.++|.+++|...|+ +|+||++||++++.. .|..++ ..+..++|.|+++|+|| +|.+...
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 35788999988763 579999999998753 366664 25556679999999999 5555431
Q ss_pred C----------CCCCCCHHHHHHHHHHHHHHhCCCCCc-EEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 69 P----------DVTSYTCFHVIGDLVGLIDTVAPNDEK-VFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 69 ~----------~~~~~~~~~~~~~l~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
. +...+++++.++++.++++.+ +.++ ++++||||||.+++.++.++|++++++|++++...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHL--GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSAR 163 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCc
Confidence 1 012478899999999999998 7778 99999999999999999999999999999987654
No 34
>PRK05855 short chain dehydrogenase; Validated
Probab=99.80 E-value=1.7e-18 Score=132.00 Aligned_cols=122 Identities=27% Similarity=0.578 Sum_probs=99.0
Q ss_pred ccceeEEEECCEEEEEeecC--CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHH
Q 044507 3 GIQHRIVKVNGINMHIAEKG--QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVI 80 (157)
Q Consensus 3 ~~~~~~~~~~g~~~~~~~~~--~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~ 80 (157)
+.+..++..+|.+++|...+ ++|+|||+||++++...|.++...| ..+|.|+++|+||+|.|........++.++.+
T Consensus 2 ~~~~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a 80 (582)
T PRK05855 2 QPRRTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLA 80 (582)
T ss_pred CceEEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHH
Confidence 34566788899999998776 3689999999999999999999999 45799999999999999765543467899999
Q ss_pred HHHHHHHHHhCCCCC-cEEEEEEcHHHHHHHHHHhc--CccceeEEEEee
Q 044507 81 GDLVGLIDTVAPNDE-KVFVVGHDWGAFMAWFLCLF--RPDRVKALVNLS 127 (157)
Q Consensus 81 ~~l~~~~~~~~~~~~-~i~l~G~S~Gg~~a~~~~~~--~~~~~~~~i~~~ 127 (157)
+++..+++.+ +.. ++.++||||||.+++.++.. .++++..++.++
T Consensus 81 ~dl~~~i~~l--~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~ 128 (582)
T PRK05855 81 DDFAAVIDAV--SPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVS 128 (582)
T ss_pred HHHHHHHHHh--CCCCcEEEEecChHHHHHHHHHhCccchhhhhhheecc
Confidence 9999999998 444 59999999999999887766 234444444443
No 35
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.79 E-value=1.3e-18 Score=121.22 Aligned_cols=110 Identities=23% Similarity=0.288 Sum_probs=89.8
Q ss_pred CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCCcEEEE
Q 044507 23 QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDV--TSYTCFHVIGDLVGLIDTVAPNDEKVFVV 100 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~i~l~ 100 (157)
+++++|++||+|.....|-.-.+.|++ ...|+++|++|+|.|+.+.-. ........++.+++-.... +.++.+|+
T Consensus 89 ~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~--~L~Kmilv 165 (365)
T KOG4409|consen 89 NKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKM--GLEKMILV 165 (365)
T ss_pred CCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHc--CCcceeEe
Confidence 568999999999999999888888888 499999999999999876511 2223334555555655555 78999999
Q ss_pred EEcHHHHHHHHHHhcCccceeEEEEeecccCCCCC
Q 044507 101 GHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPFGS 135 (157)
Q Consensus 101 G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~~ 135 (157)
|||+||+++..+|.+||++++.+|+++|.--+..+
T Consensus 166 GHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~ 200 (365)
T KOG4409|consen 166 GHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKP 200 (365)
T ss_pred eccchHHHHHHHHHhChHhhceEEEecccccccCC
Confidence 99999999999999999999999999987665533
No 36
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.79 E-value=3e-18 Score=112.53 Aligned_cols=106 Identities=24% Similarity=0.241 Sum_probs=95.8
Q ss_pred CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CCCCcEEEEEE
Q 044507 24 GPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVA-PNDEKVFVVGH 102 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~i~l~G~ 102 (157)
+..|+++||+.|+..+.+.+.+.|.++||.|.+|.+||||..... .-..+.++|.+++.+..+.+. ...+.|.++|-
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~--fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPED--FLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHH--HhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 369999999999999999999999999999999999999987543 256889999999999999887 46789999999
Q ss_pred cHHHHHHHHHHhcCccceeEEEEeecccCCC
Q 044507 103 DWGAFMAWFLCLFRPDRVKALVNLSVVFNPF 133 (157)
Q Consensus 103 S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~ 133 (157)
||||.+++.++..+| +++++.+|++....
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k 121 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVK 121 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccc
Confidence 999999999999998 89999999988743
No 37
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.79 E-value=4.6e-18 Score=124.47 Aligned_cols=105 Identities=23% Similarity=0.355 Sum_probs=84.7
Q ss_pred CCCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHH----HHHHHHHHHHHHhCCCCCcE
Q 044507 22 GQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCF----HVIGDLVGLIDTVAPNDEKV 97 (157)
Q Consensus 22 ~~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~i 97 (157)
+++|+||++||++++...|...++.|.++ |.|+++|+||+|.|..+.. ...+.. ..++++.++++.+ +.+++
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~-~~~~~~~~~~~~~~~i~~~~~~l--~~~~~ 178 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDF-TCKSTEETEAWFIDSFEEWRKAK--NLSNF 178 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCc-ccccHHHHHHHHHHHHHHHHHHc--CCCCe
Confidence 35689999999999888898888888875 9999999999999875431 111112 2345566667666 66799
Q ss_pred EEEEEcHHHHHHHHHHhcCccceeEEEEeeccc
Q 044507 98 FVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 98 ~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
+++||||||.+++.++.++|++++++|++++..
T Consensus 179 ~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~ 211 (402)
T PLN02894 179 ILLGHSFGGYVAAKYALKHPEHVQHLILVGPAG 211 (402)
T ss_pred EEEEECHHHHHHHHHHHhCchhhcEEEEECCcc
Confidence 999999999999999999999999999998754
No 38
>PRK07581 hypothetical protein; Validated
Probab=99.79 E-value=1.1e-18 Score=125.28 Aligned_cols=118 Identities=18% Similarity=0.278 Sum_probs=84.6
Q ss_pred ECCEEEEEeecCC----C-CEEEEeCCCCCchhhHHHHH---HHHHhCCCEEEecCCCCCCCCCCCCCC-CCCCHH----
Q 044507 11 VNGINMHIAEKGQ----G-PVILFLHGFPELWYSWRHQI---TALASLGYRAVAPDLRGFGDTDAPPDV-TSYTCF---- 77 (157)
Q Consensus 11 ~~g~~~~~~~~~~----~-p~vl~~hG~~~~~~~~~~~~---~~l~~~g~~v~~~d~~g~g~s~~~~~~-~~~~~~---- 77 (157)
++|.+++|...|+ + |+||++||++++...|..++ ..|...+|+|+++|+||+|.|..+... ..++.+
T Consensus 23 ~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 102 (339)
T PRK07581 23 LPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPH 102 (339)
T ss_pred cCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCc
Confidence 4678899987663 3 46777777776666665443 356556799999999999998754321 112221
Q ss_pred -HHHHHHHH----HHHHhCCCCCc-EEEEEEcHHHHHHHHHHhcCccceeEEEEeeccc
Q 044507 78 -HVIGDLVG----LIDTVAPNDEK-VFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 78 -~~~~~l~~----~~~~~~~~~~~-i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
...+++.. +++.+ +.++ ++++||||||++++.++.++|++++++|++++..
T Consensus 103 ~~~~~~~~~~~~~l~~~l--gi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~ 159 (339)
T PRK07581 103 VTIYDNVRAQHRLLTEKF--GIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTA 159 (339)
T ss_pred eeHHHHHHHHHHHHHHHh--CCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCC
Confidence 13344433 55667 7788 5799999999999999999999999999997654
No 39
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.78 E-value=7.8e-18 Score=122.74 Aligned_cols=118 Identities=19% Similarity=0.258 Sum_probs=93.6
Q ss_pred CCEEEEEeecC-----CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 044507 12 NGINMHIAEKG-----QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGL 86 (157)
Q Consensus 12 ~g~~~~~~~~~-----~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~ 86 (157)
++..+++..+. .+++||++||++++...|..+++.|.++||.|+++|+||||.|..... ...+.+...+++.++
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~~~~Dl~~~ 197 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG-YVPSLDYVVEDTEAF 197 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-CCcCHHHHHHHHHHH
Confidence 45666655432 236899999999998889999999999999999999999999876432 234677778888888
Q ss_pred HHHhCC--CCCcEEEEEEcHHHHHHHHHHhcCc---cceeEEEEeecccC
Q 044507 87 IDTVAP--NDEKVFVVGHDWGAFMAWFLCLFRP---DRVKALVNLSVVFN 131 (157)
Q Consensus 87 ~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~---~~~~~~i~~~~~~~ 131 (157)
++.+.. ...+++++||||||.+++.++. +| ++++++|+.+|...
T Consensus 198 l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 198 LEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALR 246 (395)
T ss_pred HHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccc
Confidence 888753 2357999999999999998764 55 47999999988754
No 40
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.78 E-value=2.8e-18 Score=124.90 Aligned_cols=120 Identities=17% Similarity=0.265 Sum_probs=94.0
Q ss_pred EECCEEEEEeecCC-----CCEEEEeCCCCCchhh-------------HHHHHH---HHHhCCCEEEecCCCCC-CCCCC
Q 044507 10 KVNGINMHIAEKGQ-----GPVILFLHGFPELWYS-------------WRHQIT---ALASLGYRAVAPDLRGF-GDTDA 67 (157)
Q Consensus 10 ~~~g~~~~~~~~~~-----~p~vl~~hG~~~~~~~-------------~~~~~~---~l~~~g~~v~~~d~~g~-g~s~~ 67 (157)
.++|.+++|...|+ +|+||++||++++... |..++. .+...+|+|+++|++|+ |.|..
T Consensus 29 ~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~ 108 (379)
T PRK00175 29 VLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTG 108 (379)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCC
Confidence 34677889987763 5899999999998875 445441 34345799999999983 43322
Q ss_pred CC------------CCCCCCHHHHHHHHHHHHHHhCCCCCc-EEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 68 PP------------DVTSYTCFHVIGDLVGLIDTVAPNDEK-VFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 68 ~~------------~~~~~~~~~~~~~l~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
+. ....++..+.+.++.++++.+ +.++ ++++||||||.+++.++.++|++++++|++++...
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 183 (379)
T PRK00175 109 PSSINPDTGKPYGSDFPVITIRDWVRAQARLLDAL--GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSAR 183 (379)
T ss_pred CCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh--CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcc
Confidence 11 012578999999999999999 7778 59999999999999999999999999999987654
No 41
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.78 E-value=1.5e-17 Score=114.06 Aligned_cols=126 Identities=17% Similarity=0.280 Sum_probs=102.7
Q ss_pred eeEEEECCEEEEEeecCC----C--CEEEEeCCCCCch-hhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHH
Q 044507 6 HRIVKVNGINMHIAEKGQ----G--PVILFLHGFPELW-YSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFH 78 (157)
Q Consensus 6 ~~~~~~~g~~~~~~~~~~----~--p~vl~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~ 78 (157)
+-+.+.+|..++++.+.. . ..|+++||++... ..|..++..|++.||.|++.|++|||.|+.... ...+...
T Consensus 30 ~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~-yi~~~d~ 108 (313)
T KOG1455|consen 30 SFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA-YVPSFDL 108 (313)
T ss_pred eeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc-cCCcHHH
Confidence 344455788888765431 3 3799999999765 788999999999999999999999999986543 4567888
Q ss_pred HHHHHHHHHHHhCC----CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 79 VIGDLVGLIDTVAP----NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 79 ~~~~l~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
.++|+....+.... ...+.+++||||||++++.++.+.|+..+++|+++|....
T Consensus 109 ~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i 166 (313)
T KOG1455|consen 109 VVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKI 166 (313)
T ss_pred HHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeeccccc
Confidence 88888888886443 4568999999999999999999999999999999987663
No 42
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.78 E-value=2.2e-18 Score=117.31 Aligned_cols=98 Identities=20% Similarity=0.297 Sum_probs=81.1
Q ss_pred CC-CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEE
Q 044507 23 QG-PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVG 101 (157)
Q Consensus 23 ~~-p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G 101 (157)
++ |+||++||++++...|..+.+.|.+. |+|+++|+||+|.|.... ..+..+.++++.+.+ .++++++|
T Consensus 2 ~g~~~iv~~HG~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~------~~~~~lvG 71 (245)
T TIGR01738 2 QGNVHLVLIHGWGMNAEVFRCLDEELSAH-FTLHLVDLPGHGRSRGFG---PLSLADAAEAIAAQA------PDPAIWLG 71 (245)
T ss_pred CCCceEEEEcCCCCchhhHHHHHHhhccC-eEEEEecCCcCccCCCCC---CcCHHHHHHHHHHhC------CCCeEEEE
Confidence 34 79999999999999999999999864 999999999999986542 345655555554332 36899999
Q ss_pred EcHHHHHHHHHHhcCccceeEEEEeeccc
Q 044507 102 HDWGAFMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 102 ~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
||+||.+++.++.++|++++++|++++..
T Consensus 72 ~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 100 (245)
T TIGR01738 72 WSLGGLVALHIAATHPDRVRALVTVASSP 100 (245)
T ss_pred EcHHHHHHHHHHHHCHHhhheeeEecCCc
Confidence 99999999999999999999999987653
No 43
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.77 E-value=2.4e-17 Score=136.94 Aligned_cols=123 Identities=28% Similarity=0.408 Sum_probs=99.5
Q ss_pred cceeEEEECCEE----EEEeecCC---CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCC------
Q 044507 4 IQHRIVKVNGIN----MHIAEKGQ---GPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPD------ 70 (157)
Q Consensus 4 ~~~~~~~~~g~~----~~~~~~~~---~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~------ 70 (157)
++...+.++... ++|...++ +|+|||+||++++...|.++.+.|.+. |+|+++|+||||.|.....
T Consensus 1344 l~~~~~~v~~~~~~~~i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~ 1422 (1655)
T PLN02980 1344 VRTYELRVDVDGFSCLIKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQT 1422 (1655)
T ss_pred CceEEEEEccCceEEEEEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccc
Confidence 344455554222 44444453 589999999999999999999999875 9999999999999865321
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecc
Q 044507 71 VTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVV 129 (157)
Q Consensus 71 ~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~ 129 (157)
....+.+..++++.++++.+ +.++++++||||||.+++.++.++|+++++++++++.
T Consensus 1423 ~~~~si~~~a~~l~~ll~~l--~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1423 EPTLSVELVADLLYKLIEHI--TPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGS 1479 (1655)
T ss_pred cccCCHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCC
Confidence 13467888899999999988 6789999999999999999999999999999999764
No 44
>PLN02511 hydrolase
Probab=99.76 E-value=2e-17 Score=120.71 Aligned_cols=118 Identities=22% Similarity=0.331 Sum_probs=86.8
Q ss_pred CCEEEEEee--------cCCCCEEEEeCCCCCchhh-H-HHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHH
Q 044507 12 NGINMHIAE--------KGQGPVILFLHGFPELWYS-W-RHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIG 81 (157)
Q Consensus 12 ~g~~~~~~~--------~~~~p~vl~~hG~~~~~~~-~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~ 81 (157)
||..+.+.- ..++|+||++||++++... | ..++..+.++||+|+++|+||+|.+.... .........+
T Consensus 80 DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~--~~~~~~~~~~ 157 (388)
T PLN02511 80 DGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT--PQFYSASFTG 157 (388)
T ss_pred CCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC--cCEEcCCchH
Confidence 666666421 1356899999999776543 5 55777778889999999999999986532 1222234455
Q ss_pred HHHHHHHHhCC--CCCcEEEEEEcHHHHHHHHHHhcCccc--eeEEEEeecccC
Q 044507 82 DLVGLIDTVAP--NDEKVFVVGHDWGAFMAWFLCLFRPDR--VKALVNLSVVFN 131 (157)
Q Consensus 82 ~l~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~--~~~~i~~~~~~~ 131 (157)
|+.++++++.. ...+++++|||+||.+++.++.++|++ +.++++++++.+
T Consensus 158 Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 158 DLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFD 211 (388)
T ss_pred HHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcC
Confidence 66666666643 236899999999999999999999987 788888877654
No 45
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.73 E-value=3.7e-16 Score=114.74 Aligned_cols=107 Identities=21% Similarity=0.236 Sum_probs=80.2
Q ss_pred CCCEEEEeCCCCCch-hhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCCcEEEE
Q 044507 23 QGPVILFLHGFPELW-YSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP-NDEKVFVV 100 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~i~l~ 100 (157)
+.|+||++||+.+.. ..|..+++.|.++||+|+++|+||+|.|.... ...+.......+.+.+..... +.+++.++
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~--~~~d~~~~~~avld~l~~~~~vd~~ri~l~ 270 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK--LTQDSSLLHQAVLNALPNVPWVDHTRVAAF 270 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC--ccccHHHHHHHHHHHHHhCcccCcccEEEE
Confidence 346777777766653 56778889999999999999999999986532 112333333444444444321 56899999
Q ss_pred EEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 101 GHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 101 G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
|||+||.++++++...|++++++|+++++..
T Consensus 271 G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 271 GFRFGANVAVRLAYLEPPRLKAVACLGPVVH 301 (414)
T ss_pred EEChHHHHHHHHHHhCCcCceEEEEECCccc
Confidence 9999999999999999999999999998765
No 46
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.73 E-value=4.2e-17 Score=116.10 Aligned_cols=108 Identities=31% Similarity=0.478 Sum_probs=92.5
Q ss_pred CCCEEEEeCCCCCchhhHHHHHHHHHhC-CCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEE
Q 044507 23 QGPVILFLHGFPELWYSWRHQITALASL-GYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVG 101 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G 101 (157)
++|+||++||++++...|+.....|.+. |+.|+++|.+|+|.++..+....++.......+..++... ..++++++|
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~--~~~~~~lvg 134 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV--FVEPVSLVG 134 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh--cCcceEEEE
Confidence 5789999999999999999998888877 5999999999999655444335588888898899888888 667899999
Q ss_pred EcHHHHHHHHHHhcCccceeEEE---EeecccCC
Q 044507 102 HDWGAFMAWFLCLFRPDRVKALV---NLSVVFNP 132 (157)
Q Consensus 102 ~S~Gg~~a~~~~~~~~~~~~~~i---~~~~~~~~ 132 (157)
||+||.++..+|+.+|+.++.++ +++++...
T Consensus 135 hS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~ 168 (326)
T KOG1454|consen 135 HSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYS 168 (326)
T ss_pred eCcHHHHHHHHHHhCcccccceeeeccccccccc
Confidence 99999999999999999999999 55555543
No 47
>PRK13604 luxD acyl transferase; Provisional
Probab=99.73 E-value=1.6e-16 Score=111.05 Aligned_cols=121 Identities=17% Similarity=0.176 Sum_probs=89.2
Q ss_pred eEEEE-CCEEEEEe--ecC-----CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCC-CCCCCCCCCCCCCHH
Q 044507 7 RIVKV-NGINMHIA--EKG-----QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGF-GDTDAPPDVTSYTCF 77 (157)
Q Consensus 7 ~~~~~-~g~~~~~~--~~~-----~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-g~s~~~~~~~~~~~~ 77 (157)
+.+.+ +|..++-+ .+. +.++||++||++++...+..+++.|.++||.|+.+|.||+ |.|..... ..+..
T Consensus 12 ~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~--~~t~s 89 (307)
T PRK13604 12 HVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTID--EFTMS 89 (307)
T ss_pred heEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc--cCccc
Confidence 44444 67777643 221 2378999999999877799999999999999999999987 88865431 22222
Q ss_pred HHHHHHHHHHHHhCC-CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 78 HVIGDLVGLIDTVAP-NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 78 ~~~~~l~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
....|+...++++.. +..++.++||||||.++...+... .++++|+.+|..+
T Consensus 90 ~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~ 142 (307)
T PRK13604 90 IGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVN 142 (307)
T ss_pred ccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCccc
Confidence 235666666666543 457899999999999987776643 3889999998776
No 48
>PRK10566 esterase; Provisional
Probab=99.73 E-value=2.6e-16 Score=108.43 Aligned_cols=103 Identities=19% Similarity=0.246 Sum_probs=73.9
Q ss_pred CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCC-----CHHHHHHHHHHHHHHhC----CCC
Q 044507 24 GPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSY-----TCFHVIGDLVGLIDTVA----PND 94 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~-----~~~~~~~~l~~~~~~~~----~~~ 94 (157)
.|+||++||++++...|..+++.|.++||.|+++|+||+|.+......... ......+++.+.++.+. .+.
T Consensus 27 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (249)
T PRK10566 27 LPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLD 106 (249)
T ss_pred CCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCc
Confidence 489999999999988899999999999999999999999975321110111 01122344444444432 256
Q ss_pred CcEEEEEEcHHHHHHHHHHhcCccceeEEEEe
Q 044507 95 EKVFVVGHDWGAFMAWFLCLFRPDRVKALVNL 126 (157)
Q Consensus 95 ~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~ 126 (157)
+++.++|||+||.+++.++..+|+....++++
T Consensus 107 ~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~ 138 (249)
T PRK10566 107 DRLAVGGASMGGMTALGIMARHPWVKCVASLM 138 (249)
T ss_pred cceeEEeecccHHHHHHHHHhCCCeeEEEEee
Confidence 89999999999999999999888644444443
No 49
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.72 E-value=7.1e-17 Score=115.62 Aligned_cols=122 Identities=16% Similarity=0.281 Sum_probs=92.0
Q ss_pred EECCEEEEEeecC---CCCEEEEeCCCCCchh-hH-------------------------HHHHHHHHhCCCEEEecCCC
Q 044507 10 KVNGINMHIAEKG---QGPVILFLHGFPELWY-SW-------------------------RHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 10 ~~~g~~~~~~~~~---~~p~vl~~hG~~~~~~-~~-------------------------~~~~~~l~~~g~~v~~~d~~ 60 (157)
..||..+++..+. .+.+|+++||+++... .+ ..+++.|.++||.|+++|+|
T Consensus 4 ~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~r 83 (332)
T TIGR01607 4 NKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQ 83 (332)
T ss_pred CCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEeccc
Confidence 3478888776543 3459999999988765 21 46799999999999999999
Q ss_pred CCCCCCCCCC--CCCCCHHHHHHHHHHHHHHhCC---------------------C-CCcEEEEEEcHHHHHHHHHHhcC
Q 044507 61 GFGDTDAPPD--VTSYTCFHVIGDLVGLIDTVAP---------------------N-DEKVFVVGHDWGAFMAWFLCLFR 116 (157)
Q Consensus 61 g~g~s~~~~~--~~~~~~~~~~~~l~~~~~~~~~---------------------~-~~~i~l~G~S~Gg~~a~~~~~~~ 116 (157)
|||.|..... ....+.++.++++.++++.+.. . ..+++++||||||.+++.++.++
T Consensus 84 GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~ 163 (332)
T TIGR01607 84 GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELL 163 (332)
T ss_pred ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHh
Confidence 9999875321 1124677888888888876532 1 45899999999999999988765
Q ss_pred cc--------ceeEEEEeecccC
Q 044507 117 PD--------RVKALVNLSVVFN 131 (157)
Q Consensus 117 ~~--------~~~~~i~~~~~~~ 131 (157)
++ .++++|+++|+..
T Consensus 164 ~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 164 GKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred ccccccccccccceEEEeccceE
Confidence 32 5889998888753
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.72 E-value=1.5e-16 Score=113.69 Aligned_cols=107 Identities=18% Similarity=0.153 Sum_probs=75.8
Q ss_pred CCCEEEEeCCCCCchhh--HHHHHHHHHhCCCEEEecCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhCC--CCCcE
Q 044507 23 QGPVILFLHGFPELWYS--WRHQITALASLGYRAVAPDLRGFGDTDAPP-DVTSYTCFHVIGDLVGLIDTVAP--NDEKV 97 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~~l~~~~~~~~~--~~~~i 97 (157)
++|+||++||++++... ...+++.|.++||+|+++|+||+|.+.... ...... ...|+..+++.+.. +..++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~---~~~D~~~~i~~l~~~~~~~~~ 133 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSG---ETEDARFFLRWLQREFGHVPT 133 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCC---chHHHHHHHHHHHHhCCCCCE
Confidence 45899999999876443 356888999999999999999998764321 111111 13344433333321 45789
Q ss_pred EEEEEcHHHHHHHHHHhcCccc--eeEEEEeecccCC
Q 044507 98 FVVGHDWGAFMAWFLCLFRPDR--VKALVNLSVVFNP 132 (157)
Q Consensus 98 ~l~G~S~Gg~~a~~~~~~~~~~--~~~~i~~~~~~~~ 132 (157)
+++||||||.+++.++.++++. +.++++++++...
T Consensus 134 ~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 134 AAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLML 170 (324)
T ss_pred EEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCH
Confidence 9999999999988888877544 8899999887653
No 51
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.70 E-value=1.6e-15 Score=106.11 Aligned_cols=105 Identities=21% Similarity=0.205 Sum_probs=81.6
Q ss_pred CCCEEEEeCCCC----CchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC---CCC
Q 044507 23 QGPVILFLHGFP----ELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP---NDE 95 (157)
Q Consensus 23 ~~p~vl~~hG~~----~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~ 95 (157)
+++.||++||+. ++...+..+++.|.++||.|+.+|+||+|.|.... .+..++..++.+.++.+.. +.+
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~----~~~~~~~~d~~~~~~~l~~~~~g~~ 100 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN----LGFEGIDADIAAAIDAFREAAPHLR 100 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHHhhCCCCC
Confidence 456788888765 34445677889999999999999999999986432 3556677778877777643 346
Q ss_pred cEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 96 KVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 96 ~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
+++++|||+||.+++.++.. +.+++++|+++|....
T Consensus 101 ~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 101 RIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRT 136 (274)
T ss_pred cEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCC
Confidence 79999999999999998765 4679999999987653
No 52
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.70 E-value=2.4e-17 Score=107.07 Aligned_cols=130 Identities=20% Similarity=0.239 Sum_probs=106.6
Q ss_pred ccceeEEEECCEEEEEeecCCCC-EEEEeCCCC-CchhhHHHHHHHHHhC-CCEEEecCCCCCCCCCCCCC-CCCCCHHH
Q 044507 3 GIQHRIVKVNGINMHIAEKGQGP-VILFLHGFP-ELWYSWRHQITALASL-GYRAVAPDLRGFGDTDAPPD-VTSYTCFH 78 (157)
Q Consensus 3 ~~~~~~~~~~g~~~~~~~~~~~p-~vl~~hG~~-~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~-~~~~~~~~ 78 (157)
..++..+.++|.++.|...|.+| .|++++|.. +...+|.+.+..+.+. -+.++++|.||+|.|.++.. ....-..+
T Consensus 20 ~~te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~ 99 (277)
T KOG2984|consen 20 DYTESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMK 99 (277)
T ss_pred hhhhheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHH
Confidence 35678899999999999999997 788899975 5567888888777765 48999999999999988762 22233445
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCCC
Q 044507 79 VIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPFG 134 (157)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~ 134 (157)
.+++..++++.+ +.+++.++|+|=||..++..|+++++.+..++..++..-.+.
T Consensus 100 Da~~avdLM~aL--k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~ 153 (277)
T KOG2984|consen 100 DAEYAVDLMEAL--KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNH 153 (277)
T ss_pred hHHHHHHHHHHh--CCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecc
Confidence 667777888888 889999999999999999999999999999999887655433
No 53
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.70 E-value=2e-16 Score=107.39 Aligned_cols=104 Identities=27% Similarity=0.385 Sum_probs=88.6
Q ss_pred CCCEEEEeCCCCCchhhHHHHHHHHHhC-CCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCCcEEEE
Q 044507 23 QGPVILFLHGFPELWYSWRHQITALASL-GYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP-NDEKVFVV 100 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~i~l~ 100 (157)
.+|.+++.||.+.+...|..++.++..+ ..+++++|+||||++.-.+. ...+.+..++|+.++++++.. ...+|+++
T Consensus 73 ~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e-~dlS~eT~~KD~~~~i~~~fge~~~~iilV 151 (343)
T KOG2564|consen 73 EGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE-DDLSLETMSKDFGAVIKELFGELPPQIILV 151 (343)
T ss_pred CccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh-hhcCHHHHHHHHHHHHHHHhccCCCceEEE
Confidence 6799999999999999999999998876 57889999999999864432 568899999999999999885 57899999
Q ss_pred EEcHHHHHHHHHHhc--CccceeEEEEeec
Q 044507 101 GHDWGAFMAWFLCLF--RPDRVKALVNLSV 128 (157)
Q Consensus 101 G~S~Gg~~a~~~~~~--~~~~~~~~i~~~~ 128 (157)
||||||.+|...+.. -|. +.+++.++.
T Consensus 152 GHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 152 GHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred eccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 999999999888775 354 778877764
No 54
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.68 E-value=1.7e-15 Score=110.83 Aligned_cols=108 Identities=16% Similarity=0.175 Sum_probs=82.1
Q ss_pred CCCEEEEeCCCCCch--hhHHH-HHHHHHh--CCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CC
Q 044507 23 QGPVILFLHGFPELW--YSWRH-QITALAS--LGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVA----PN 93 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~--~~~~~-~~~~l~~--~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~----~~ 93 (157)
++|++|++||++++. ..|.+ +++.+.+ ..++|+++|++|+|.+..+. .........+++.++++.+. .+
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~--a~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPT--SAAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcc--ccccHHHHHHHHHHHHHHHHHhhCCC
Confidence 569999999998653 45654 5555542 25999999999999876543 22334555666777776552 24
Q ss_pred CCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 94 DEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 94 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
.++++++|||+||.+|..++...|+++.++++++|+.+.
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 689999999999999999999999999999999987653
No 55
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.68 E-value=1.4e-15 Score=96.42 Aligned_cols=93 Identities=32% Similarity=0.488 Sum_probs=75.8
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHH
Q 044507 26 VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWG 105 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~G 105 (157)
+||++||++++...|..+++.|.++||.++.+|+|+++.+.... ...++.+.+.....+..++.++|||+|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~i~l~G~S~G 71 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGAD---------AVERVLADIRAGYPDPDRIILIGHSMG 71 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHSH---------HHHHHHHHHHHHHCTCCEEEEEEETHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchhH---------HHHHHHHHHHhhcCCCCcEEEEEEccC
Confidence 68999999999999999999999999999999999999872211 233333332221227789999999999
Q ss_pred HHHHHHHHhcCccceeEEEEeec
Q 044507 106 AFMAWFLCLFRPDRVKALVNLSV 128 (157)
Q Consensus 106 g~~a~~~~~~~~~~~~~~i~~~~ 128 (157)
|.+++.++.+. .+++++|++++
T Consensus 72 g~~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 72 GAIAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHHHHS-TTESEEEEESE
T ss_pred cHHHHHHhhhc-cceeEEEEecC
Confidence 99999999988 68999999998
No 56
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.66 E-value=1.1e-15 Score=106.82 Aligned_cols=109 Identities=20% Similarity=0.253 Sum_probs=78.8
Q ss_pred CCCEEEEeCCCCCch-hhHHH-HHHHH-HhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCCC
Q 044507 23 QGPVILFLHGFPELW-YSWRH-QITAL-ASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVA----PNDE 95 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~-~~~~~-~~~~l-~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~ 95 (157)
++|++|++||++++. ..|.. +.+.+ .+.+++|+++|+++++...... ...+.....+++..+++.+. .+.+
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~--a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ--AVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH--HHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 568999999999876 56644 44444 4457999999999874332211 22334444555555555542 2457
Q ss_pred cEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCC
Q 044507 96 KVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPF 133 (157)
Q Consensus 96 ~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~ 133 (157)
+++++|||+||.++..++...|+++++++.++|+.+.+
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~f 150 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPLF 150 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcccc
Confidence 99999999999999999999999999999999876543
No 57
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.64 E-value=9.4e-15 Score=98.57 Aligned_cols=108 Identities=21% Similarity=0.203 Sum_probs=74.0
Q ss_pred CCCEEEEeCCCCCchhhHH---HHHHHHHhCCCEEEecCCCCCCCCCCCCCC---CC-CCHHHHHHHHHHHHHHhC----
Q 044507 23 QGPVILFLHGFPELWYSWR---HQITALASLGYRAVAPDLRGFGDTDAPPDV---TS-YTCFHVIGDLVGLIDTVA---- 91 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~---~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~---~~-~~~~~~~~~l~~~~~~~~---- 91 (157)
+.|+||++||.+++...+. .+...+.+.|+.|++||.+|++.+....+. .. ........++.++++.+.
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 5689999999998877664 345555667999999999998643211000 00 000112223333333332
Q ss_pred CCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeeccc
Q 044507 92 PNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 92 ~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
.+.++++++|||+||.+++.++..+|+.+.+++.+++..
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 255799999999999999999999999999998888654
No 58
>PRK11071 esterase YqiA; Provisional
Probab=99.63 E-value=6.9e-15 Score=97.57 Aligned_cols=89 Identities=20% Similarity=0.210 Sum_probs=72.7
Q ss_pred CEEEEeCCCCCchhhHHH--HHHHHHhC--CCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEE
Q 044507 25 PVILFLHGFPELWYSWRH--QITALASL--GYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVV 100 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~--~~~~l~~~--g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~ 100 (157)
|+||++||++++...|.. +...+.++ ++.++++|+||++ .+.++.+.++++.+ +.+++.++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------~~~~~~l~~l~~~~--~~~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------ADAAELLESLVLEH--GGDPLGLV 66 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------HHHHHHHHHHHHHc--CCCCeEEE
Confidence 689999999999999874 44566553 6999999999874 24567788888877 66799999
Q ss_pred EEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 101 GHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 101 G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
|||+||.+++.++.++|. .+++++|+..
T Consensus 67 G~S~Gg~~a~~~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML---PAVVVNPAVR 94 (190)
T ss_pred EECHHHHHHHHHHHHcCC---CEEEECCCCC
Confidence 999999999999999984 3577887665
No 59
>PLN02872 triacylglycerol lipase
Probab=99.63 E-value=1.9e-15 Score=110.11 Aligned_cols=127 Identities=21% Similarity=0.325 Sum_probs=92.0
Q ss_pred cceeEEEE-CCEEEEEeec---------CCCCEEEEeCCCCCchhhH------HHHHHHHHhCCCEEEecCCCCCCCCCC
Q 044507 4 IQHRIVKV-NGINMHIAEK---------GQGPVILFLHGFPELWYSW------RHQITALASLGYRAVAPDLRGFGDTDA 67 (157)
Q Consensus 4 ~~~~~~~~-~g~~~~~~~~---------~~~p~vl~~hG~~~~~~~~------~~~~~~l~~~g~~v~~~d~~g~g~s~~ 67 (157)
.|.+.++. ||..+...+- ..+|+|+++||+..+...| ..++..|+++||.|+++|.||++.+..
T Consensus 44 ~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~g 123 (395)
T PLN02872 44 CTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYG 123 (395)
T ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccC
Confidence 45666655 7877775531 1357999999998877776 345667889999999999999876532
Q ss_pred CC-------CCCCCCHHHHH-HHHHHHHHHhCC-CCCcEEEEEEcHHHHHHHHHHhcCcc---ceeEEEEeecccC
Q 044507 68 PP-------DVTSYTCFHVI-GDLVGLIDTVAP-NDEKVFVVGHDWGAFMAWFLCLFRPD---RVKALVNLSVVFN 131 (157)
Q Consensus 68 ~~-------~~~~~~~~~~~-~~l~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~---~~~~~i~~~~~~~ 131 (157)
.. .....+..+.+ .|+.++++++.. ..+++.++|||+||.+++.++ .+|+ +++.+++++|...
T Consensus 124 h~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 124 HVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred CCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhh
Confidence 11 11245666666 688888888643 347999999999999998555 5665 5788888887654
No 60
>PLN00021 chlorophyllase
Probab=99.62 E-value=7.2e-15 Score=104.16 Aligned_cols=108 Identities=30% Similarity=0.401 Sum_probs=77.7
Q ss_pred CCCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CCCCCc
Q 044507 22 GQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTV-----APNDEK 96 (157)
Q Consensus 22 ~~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~ 96 (157)
++.|+||++||++.+...|..+++.|+++||.|+++|+++++...... ...+..+....+.+.++.+ ..+.++
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~--~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~ 127 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTD--EIKDAAAVINWLSSGLAAVLPEGVRPDLSK 127 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchh--hHHHHHHHHHHHHhhhhhhcccccccChhh
Confidence 355899999999999889999999999999999999998864321111 1111222233333322221 124578
Q ss_pred EEEEEEcHHHHHHHHHHhcCcc-----ceeEEEEeecccC
Q 044507 97 VFVVGHDWGAFMAWFLCLFRPD-----RVKALVNLSVVFN 131 (157)
Q Consensus 97 i~l~G~S~Gg~~a~~~~~~~~~-----~~~~~i~~~~~~~ 131 (157)
+.++|||+||.+++.++..+++ ++.++++++|...
T Consensus 128 v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 128 LALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred eEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 9999999999999999998874 5789999887543
No 61
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.61 E-value=1.5e-14 Score=104.51 Aligned_cols=104 Identities=16% Similarity=0.150 Sum_probs=79.2
Q ss_pred CCEEEEeCCCCCchh-----hHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHHHhCC--CCC
Q 044507 24 GPVILFLHGFPELWY-----SWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIG-DLVGLIDTVAP--NDE 95 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~-----~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~-~l~~~~~~~~~--~~~ 95 (157)
+++||++||...+.. .+..+++.|.++||.|+++|++|+|.+.. ..+..+... ++.+.++.+.. +.+
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~-----~~~~~d~~~~~~~~~v~~l~~~~~~~ 136 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR-----YLTLDDYINGYIDKCVDYICRTSKLD 136 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh-----cCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 458999999754332 24688999999999999999999887643 234455443 24444444322 567
Q ss_pred cEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 96 KVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 96 ~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
+++++|||+||.+++.++..+|++++++++++++.+.
T Consensus 137 ~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 137 QISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred cccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 9999999999999999999999999999999988764
No 62
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.58 E-value=5e-14 Score=109.03 Aligned_cols=110 Identities=22% Similarity=0.232 Sum_probs=85.3
Q ss_pred eeEEEECCEEEEEeecCC-----------CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCC------
Q 044507 6 HRIVKVNGINMHIAEKGQ-----------GPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAP------ 68 (157)
Q Consensus 6 ~~~~~~~g~~~~~~~~~~-----------~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~------ 68 (157)
..++..++..+.|...+. .|+||++||++++...|..+++.|.++||+|+++|+||||.+...
T Consensus 420 ~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 420 VLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred eEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccc
Confidence 445555676666554322 258999999999999999999999999999999999999998432
Q ss_pred ---C-CCC-----------CCCHHHHHHHHHHHHHHhC--------------CCCCcEEEEEEcHHHHHHHHHHhc
Q 044507 69 ---P-DVT-----------SYTCFHVIGDLVGLIDTVA--------------PNDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 69 ---~-~~~-----------~~~~~~~~~~l~~~~~~~~--------------~~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
. ... +.+.++.+.|+..+...+. .+..+++++||||||.++..++..
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 1 000 1267888888888888775 124699999999999999999875
No 63
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.57 E-value=1.9e-13 Score=95.70 Aligned_cols=111 Identities=24% Similarity=0.384 Sum_probs=77.8
Q ss_pred CCCEEEEeCCCCCchhhHHHH---HHHHHhCCCEEEecCC--CCCCCCCCC---------------C---CCCCCCHHH-
Q 044507 23 QGPVILFLHGFPELWYSWRHQ---ITALASLGYRAVAPDL--RGFGDTDAP---------------P---DVTSYTCFH- 78 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~---~~~l~~~g~~v~~~d~--~g~g~s~~~---------------~---~~~~~~~~~- 78 (157)
+.|+|+++||.+++...|... ...+.+.|+.|++||. +|++.+... . .........
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 458999999999988877432 2344456999999998 444422110 0 000112222
Q ss_pred HHHHHHHHHHHh-CCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCC
Q 044507 79 VIGDLVGLIDTV-APNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPF 133 (157)
Q Consensus 79 ~~~~l~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~ 133 (157)
..+++..+++.. ..+.+++.++||||||.+++.++.++|+.+++++++++...+.
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPS 176 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcc
Confidence 356666667663 2266899999999999999999999999999999998876543
No 64
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.55 E-value=9.1e-14 Score=105.74 Aligned_cols=118 Identities=22% Similarity=0.295 Sum_probs=88.0
Q ss_pred ECCEEEEEe---ec--CCCCEEEEeCCCCCchh---hH-HHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHH
Q 044507 11 VNGINMHIA---EK--GQGPVILFLHGFPELWY---SW-RHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIG 81 (157)
Q Consensus 11 ~~g~~~~~~---~~--~~~p~vl~~hG~~~~~~---~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~ 81 (157)
-||.+|++. .. +..|+||++||++.+.. .+ ......+.++||.|+.+|+||+|.|...... .. ....+
T Consensus 4 ~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~--~~-~~~~~ 80 (550)
T TIGR00976 4 RDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL--LG-SDEAA 80 (550)
T ss_pred CCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEe--cC-cccch
Confidence 367777732 22 24589999999987643 12 2345678889999999999999999764321 21 34566
Q ss_pred HHHHHHHHhCC---CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 82 DLVGLIDTVAP---NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 82 ~l~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
|+.++++.+.. ...++.++|+|+||.+++.++..+|+.+++++..++..+
T Consensus 81 D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 81 DGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 77777776643 236999999999999999999999999999999887655
No 65
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.55 E-value=1.6e-13 Score=93.85 Aligned_cols=103 Identities=24% Similarity=0.312 Sum_probs=89.7
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcH
Q 044507 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDW 104 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~ 104 (157)
.+||-+||.+|++.++.-+...|.+.|.+++.+++||+|.+..+.+ ..++..+-..-+.++++.+... +++..+|||.
T Consensus 36 gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~-~~~~n~er~~~~~~ll~~l~i~-~~~i~~gHSr 113 (297)
T PF06342_consen 36 GTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPD-QQYTNEERQNFVNALLDELGIK-GKLIFLGHSR 113 (297)
T ss_pred eeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc-cccChHHHHHHHHHHHHHcCCC-CceEEEEecc
Confidence 3899999999999999999999999999999999999999987665 4567777777888899988543 7899999999
Q ss_pred HHHHHHHHHhcCccceeEEEEeecccC
Q 044507 105 GAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 105 Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
||-.|++++..+| ..+++++.|+-.
T Consensus 114 Gcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 114 GCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred chHHHHHHHhcCc--cceEEEecCCcc
Confidence 9999999999996 568888887654
No 66
>PLN02442 S-formylglutathione hydrolase
Probab=99.54 E-value=3.2e-13 Score=94.90 Aligned_cols=110 Identities=25% Similarity=0.337 Sum_probs=74.9
Q ss_pred CCCEEEEeCCCCCchhhHHH---HHHHHHhCCCEEEecCCCCCCCC-----C------CCC---CCC-----CCC-HHHH
Q 044507 23 QGPVILFLHGFPELWYSWRH---QITALASLGYRAVAPDLRGFGDT-----D------APP---DVT-----SYT-CFHV 79 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~g~g~s-----~------~~~---~~~-----~~~-~~~~ 79 (157)
+.|+|+++||++++...|.. +.+.+...|+.|+.||..++|.. . ... +.. ... ....
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 45899999999988776633 34566777999999998765511 0 000 000 001 1112
Q ss_pred HHHHHHHHHHhC--CCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 80 IGDLVGLIDTVA--PNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 80 ~~~l~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
.+++.+.++... .+.+++.++||||||..++.++.++|+++++++++++..++
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~ 180 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANP 180 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCc
Confidence 333443333321 16789999999999999999999999999999999988764
No 67
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.54 E-value=1.8e-13 Score=95.25 Aligned_cols=105 Identities=24% Similarity=0.318 Sum_probs=90.7
Q ss_pred CCCEEEEeCCCCCchhhHHHHHHHHHhC-CCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCCcEEE
Q 044507 23 QGPVILFLHGFPELWYSWRHQITALASL-GYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP--NDEKVFV 99 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~l 99 (157)
..|+++++||.-|+..+|..+...|+.. +..++.+|.|.||.|.... ..+....+.++..+++.... ...++.+
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~---~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT---VHNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc---ccCHHHHHHHHHHHHHHcccccccCCcee
Confidence 5699999999999999999999999876 7899999999999997764 45688889999999998753 3579999
Q ss_pred EEEcHHH-HHHHHHHhcCccceeEEEEeeccc
Q 044507 100 VGHDWGA-FMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 100 ~G~S~Gg-~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
+|||||| .+++..+..+|+.+..+|..+.+.
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP 159 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISP 159 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCC
Confidence 9999999 777888888999998888887544
No 68
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.53 E-value=2.4e-13 Score=99.07 Aligned_cols=117 Identities=20% Similarity=0.245 Sum_probs=88.9
Q ss_pred CEEEEEeecCC-----CCEEEEeCCCCCchh------------h-HHHHH---HHHHhCCCEEEecCCCCCCCCCC----
Q 044507 13 GINMHIAEKGQ-----GPVILFLHGFPELWY------------S-WRHQI---TALASLGYRAVAPDLRGFGDTDA---- 67 (157)
Q Consensus 13 g~~~~~~~~~~-----~p~vl~~hG~~~~~~------------~-~~~~~---~~l~~~g~~v~~~d~~g~g~s~~---- 67 (157)
..++.|...|+ .++||++|++.++.. . |..++ +.+....|-||++|..|.+.|..
T Consensus 40 ~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g 119 (389)
T PRK06765 40 DVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVI 119 (389)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCC
Confidence 46678887763 379999999988542 1 33333 22334459999999998754210
Q ss_pred --------C-------CCCCCCCHHHHHHHHHHHHHHhCCCCCcEE-EEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 68 --------P-------PDVTSYTCFHVIGDLVGLIDTVAPNDEKVF-VVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 68 --------~-------~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
+ .+.+.++..+.++++..+++.+ +.+++. ++||||||++++.++.++|++++++|++++...
T Consensus 120 ~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l--gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~ 197 (389)
T PRK06765 120 TTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL--GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQ 197 (389)
T ss_pred CCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCC
Confidence 1 0234588999999999999998 778886 999999999999999999999999999987644
No 69
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.53 E-value=4.5e-13 Score=91.28 Aligned_cols=116 Identities=40% Similarity=0.692 Sum_probs=89.4
Q ss_pred EECCEEEEEeecCC-CCEEEEeCCCCCchhhHHHHHHHHHhC--CCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 044507 10 KVNGINMHIAEKGQ-GPVILFLHGFPELWYSWRHQITALASL--GYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGL 86 (157)
Q Consensus 10 ~~~g~~~~~~~~~~-~p~vl~~hG~~~~~~~~~~~~~~l~~~--g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~ 86 (157)
......+.|...+. +|+++++||++++...|......+... .|.++.+|+||+|.|. .. .......+.++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~---~~~~~~~~~~~~~~ 81 (282)
T COG0596 6 AADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA---GYSLSAYADDLAAL 81 (282)
T ss_pred cCCCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc---cccHHHHHHHHHHH
Confidence 33555666665543 679999999999988887743333332 1899999999999997 11 23334447888888
Q ss_pred HHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 87 IDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 87 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
++.+ +..++.++|||+||.++..++.++|+.+++++++++...
T Consensus 82 ~~~~--~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 82 LDAL--GLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred HHHh--CCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 8887 656699999999999999999999999999999997654
No 70
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.53 E-value=8e-14 Score=94.30 Aligned_cols=76 Identities=34% Similarity=0.523 Sum_probs=68.8
Q ss_pred CEEEecCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecc
Q 044507 52 YRAVAPDLRGFGDTDA--PPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVV 129 (157)
Q Consensus 52 ~~v~~~d~~g~g~s~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~ 129 (157)
|.|+++|+||+|.|++ .......+..+..+++..+++.+ +.++++++||||||.+++.++..+|++++++++++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL--GIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH--TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh--CCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 6899999999999985 24457788999999999999999 7778999999999999999999999999999999886
No 71
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.52 E-value=1.7e-13 Score=102.87 Aligned_cols=109 Identities=16% Similarity=0.162 Sum_probs=78.8
Q ss_pred CCCEEEEeCCCCCchhhH-----HHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcE
Q 044507 23 QGPVILFLHGFPELWYSW-----RHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKV 97 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i 97 (157)
.++|||++|++.....-+ +++++.|.++||.|+++|++|+|.+........+..+.....+..+.+.. +.+++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~--g~~kv 264 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAIT--GEKQV 264 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhc--CCCCe
Confidence 347999999987655544 47899999999999999999999875433222233333344444444444 67899
Q ss_pred EEEEEcHHHHHHH----HHHhcC-ccceeEEEEeecccCCC
Q 044507 98 FVVGHDWGAFMAW----FLCLFR-PDRVKALVNLSVVFNPF 133 (157)
Q Consensus 98 ~l~G~S~Gg~~a~----~~~~~~-~~~~~~~i~~~~~~~~~ 133 (157)
+++|||+||.++. .++... +++++++++++++.+..
T Consensus 265 ~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 265 NCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFS 305 (532)
T ss_pred EEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCC
Confidence 9999999999852 345554 77899999999877643
No 72
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.50 E-value=1.6e-13 Score=99.11 Aligned_cols=129 Identities=19% Similarity=0.240 Sum_probs=82.3
Q ss_pred cceeEEEECCEEEEEe---ecCCC--CEEEEeCCCCCchhhHH-HHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHH
Q 044507 4 IQHRIVKVNGINMHIA---EKGQG--PVILFLHGFPELWYSWR-HQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCF 77 (157)
Q Consensus 4 ~~~~~~~~~g~~~~~~---~~~~~--p~vl~~hG~~~~~~~~~-~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~ 77 (157)
++...+..+|..|.-. ..+++ |+||++.|.-+..+++. -+.+.+.++|+.++++|.||.|.|...+ ...+.+
T Consensus 165 i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~--l~~D~~ 242 (411)
T PF06500_consen 165 IEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWP--LTQDSS 242 (411)
T ss_dssp EEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT---S-S-CC
T ss_pred cEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCC--CCcCHH
Confidence 3455566677665422 22333 67777777777666654 4456789999999999999999985433 122233
Q ss_pred HHHHHHHHHHHHhCC-CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCCC
Q 044507 78 HVIGDLVGLIDTVAP-NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPFG 134 (157)
Q Consensus 78 ~~~~~l~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~ 134 (157)
.....+.+.+..... +..+|.++|.|+||+.+.++|...+++++++|..+++.+...
T Consensus 243 ~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~f 300 (411)
T PF06500_consen 243 RLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFF 300 (411)
T ss_dssp HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGG
T ss_pred HHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhh
Confidence 445555555555432 668999999999999999999999899999999999876443
No 73
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.48 E-value=1.3e-12 Score=88.18 Aligned_cols=105 Identities=18% Similarity=0.238 Sum_probs=80.4
Q ss_pred CCEEEEeCCCCCchhhHHHHHHHHHhC-CCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 044507 24 GPVILFLHGFPELWYSWRHQITALASL-GYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGH 102 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~ 102 (157)
.+++++.||...+..+...+...+..+ +++++.+|++|+|.|...+. ..+..+.++.+-+.++.-....++|+++|+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ps--E~n~y~Di~avye~Lr~~~g~~~~Iil~G~ 137 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPS--ERNLYADIKAVYEWLRNRYGSPERIILYGQ 137 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcc--cccchhhHHHHHHHHHhhcCCCceEEEEEe
Confidence 389999999977666655566666653 79999999999999987653 234444455555555544324689999999
Q ss_pred cHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 103 DWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 103 S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
|+|+..++.+|.+.| ++++|+.+|..+.
T Consensus 138 SiGt~~tv~Lasr~~--~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 138 SIGTVPTVDLASRYP--LAAVVLHSPFTSG 165 (258)
T ss_pred cCCchhhhhHhhcCC--cceEEEeccchhh
Confidence 999999999999998 9999999887653
No 74
>PRK10162 acetyl esterase; Provisional
Probab=99.47 E-value=9.7e-13 Score=93.88 Aligned_cols=108 Identities=16% Similarity=0.138 Sum_probs=74.8
Q ss_pred CCCEEEEeCCCC---CchhhHHHHHHHHHhC-CCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEE
Q 044507 23 QGPVILFLHGFP---ELWYSWRHQITALASL-GYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVF 98 (157)
Q Consensus 23 ~~p~vl~~hG~~---~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~ 98 (157)
..|+||++||.+ ++...+..+.+.|++. |+.|+.+|+|...+...+. ...+.......+.+..+.+..+.++++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~--~~~D~~~a~~~l~~~~~~~~~d~~~i~ 157 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ--AIEEIVAVCCYFHQHAEDYGINMSRIG 157 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC--cHHHHHHHHHHHHHhHHHhCCChhHEE
Confidence 458999999976 5666777788888874 9999999999654432221 122222233344444444433568999
Q ss_pred EEEEcHHHHHHHHHHhcC------ccceeEEEEeecccCC
Q 044507 99 VVGHDWGAFMAWFLCLFR------PDRVKALVNLSVVFNP 132 (157)
Q Consensus 99 l~G~S~Gg~~a~~~~~~~------~~~~~~~i~~~~~~~~ 132 (157)
++|+|+||.+++.++... +..+++++++.|..+.
T Consensus 158 l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 158 FAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred EEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 999999999999888642 3568899999886653
No 75
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.47 E-value=2.9e-12 Score=92.18 Aligned_cols=126 Identities=21% Similarity=0.311 Sum_probs=86.6
Q ss_pred ceeEEEE-CCEEEEEee-----------cCCCCEEEEeCCCCCc-hhhH-HHHHHHHHhCCCEEEecCCCCCCCCCCCCC
Q 044507 5 QHRIVKV-NGINMHIAE-----------KGQGPVILFLHGFPEL-WYSW-RHQITALASLGYRAVAPDLRGFGDTDAPPD 70 (157)
Q Consensus 5 ~~~~~~~-~g~~~~~~~-----------~~~~p~vl~~hG~~~~-~~~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~ 70 (157)
+..+++. ||..+.+.- .++.|+||++||..+. .+.| +.++..+.++||++++.+.||.+.+.-..
T Consensus 94 ~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT- 172 (409)
T KOG1838|consen 94 TREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT- 172 (409)
T ss_pred eeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC-
Confidence 4455555 677766541 1355999999998654 4444 77888899999999999999988875543
Q ss_pred CCCCCHHHHHHHHHHHHHHhCC--CCCcEEEEEEcHHHHHHHHHHhcCccc--eeEEEEeecccCC
Q 044507 71 VTSYTCFHVIGDLVGLIDTVAP--NDEKVFVVGHDWGAFMAWFLCLFRPDR--VKALVNLSVVFNP 132 (157)
Q Consensus 71 ~~~~~~~~~~~~l~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~--~~~~i~~~~~~~~ 132 (157)
...-..-+..|+.++++++.. ...++..+|.||||.+.+.++.+..+. +.+.+.++.+.+.
T Consensus 173 -pr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~ 237 (409)
T KOG1838|consen 173 -PRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDL 237 (409)
T ss_pred -CceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchh
Confidence 122222234455555555443 456899999999999999999985543 5666677666653
No 76
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.46 E-value=2.9e-12 Score=87.02 Aligned_cols=110 Identities=18% Similarity=0.211 Sum_probs=71.1
Q ss_pred CCCEEEEeCCCCCchhhHHHHHHHHHh--------CCCEEEecCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHHHh---
Q 044507 23 QGPVILFLHGFPELWYSWRHQITALAS--------LGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIG-DLVGLIDTV--- 90 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~-~l~~~~~~~--- 90 (157)
++.+|||+||..|+..+++.+...+.+ ..+.++..|+........-. ......+... .+..+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~--~l~~q~~~~~~~i~~i~~~~~~~ 80 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGR--TLQRQAEFLAEAIKYILELYKSN 80 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccc--cHHHHHHHHHHHHHHHHHhhhhc
Confidence 467999999999999888888766632 14778888876432221110 1111112222 222222222
Q ss_pred CCCCCcEEEEEEcHHHHHHHHHHhcCc---cceeEEEEeecccCCCC
Q 044507 91 APNDEKVFVVGHDWGAFMAWFLCLFRP---DRVKALVNLSVVFNPFG 134 (157)
Q Consensus 91 ~~~~~~i~l~G~S~Gg~~a~~~~~~~~---~~~~~~i~~~~~~~~~~ 134 (157)
....++++++||||||.++..++...+ +.++.+|.+++|.....
T Consensus 81 ~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 81 RPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred cCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 235789999999999999888776543 47999999998877443
No 77
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.46 E-value=6.5e-13 Score=107.10 Aligned_cols=106 Identities=20% Similarity=0.298 Sum_probs=80.7
Q ss_pred CCCEEEEeCCCCCchhhHHH-----HHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCCc
Q 044507 23 QGPVILFLHGFPELWYSWRH-----QITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP-NDEK 96 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~-----~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~ 96 (157)
.+|+||++||+..+...|+. ++..|.++||+|+++|+ |.+..+......++.+.+..+.+.++.+.. ..++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~ 142 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRD 142 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCc
Confidence 45899999999998888864 47889999999999994 554443221235677777677766665321 3468
Q ss_pred EEEEEEcHHHHHHHHHHhcC-ccceeEEEEeecccC
Q 044507 97 VFVVGHDWGAFMAWFLCLFR-PDRVKALVNLSVVFN 131 (157)
Q Consensus 97 i~l~G~S~Gg~~a~~~~~~~-~~~~~~~i~~~~~~~ 131 (157)
++++||||||.+++.++..+ +++++++++++++.+
T Consensus 143 v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVD 178 (994)
T ss_pred eEEEEEChhHHHHHHHHHhcCCCccceEEEEecccc
Confidence 99999999999999988755 558999999888754
No 78
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.46 E-value=4.4e-12 Score=88.25 Aligned_cols=112 Identities=21% Similarity=0.357 Sum_probs=94.9
Q ss_pred CCEEEEeCCCCCchhhHHHHHHHHHhC---CCEEEecCCCCCCCCCCC----CCCCCCCHHHHHHHHHHHHHHhCC----
Q 044507 24 GPVILFLHGFPELWYSWRHQITALASL---GYRAVAPDLRGFGDTDAP----PDVTSYTCFHVIGDLVGLIDTVAP---- 92 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~~~~~~l~~~---g~~v~~~d~~g~g~s~~~----~~~~~~~~~~~~~~l~~~~~~~~~---- 92 (157)
++.+++++|.+|-..-|.++.+.|.++ .+.|+++.+.||-.+... .+...++++++++...++++....
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 457999999999999999999888855 699999999999776554 234678999999998888888765
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcCc---cceeEEEEeecccCCCCC
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFRP---DRVKALVNLSVVFNPFGS 135 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~~---~~~~~~i~~~~~~~~~~~ 135 (157)
...+++++|||.|++++++++.+.+ .++.+++++.|.......
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~ 127 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAK 127 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccC
Confidence 5678999999999999999999998 679999999988764443
No 79
>PRK11460 putative hydrolase; Provisional
Probab=99.46 E-value=2.8e-12 Score=87.67 Aligned_cols=108 Identities=12% Similarity=0.075 Sum_probs=69.8
Q ss_pred CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCC-------CCCCCC-C-CCC---CCHHHHHHHHHHHHHHh
Q 044507 23 QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFG-------DTDAPP-D-VTS---YTCFHVIGDLVGLIDTV 90 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g-------~s~~~~-~-~~~---~~~~~~~~~l~~~~~~~ 90 (157)
..|+||++||++++...|.++++.|.+.+..+..++++|.. .++... . ... .+..+....+.+.++.+
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 45799999999999999999999998765443343344321 111100 0 000 11122223333333332
Q ss_pred ----CCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeeccc
Q 044507 91 ----APNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 91 ----~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
..+.++++++|+|+||.+++.++..+|+.+.+++.+++..
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~ 138 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY 138 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc
Confidence 2245789999999999999999999998888888877643
No 80
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.45 E-value=1.6e-12 Score=88.88 Aligned_cols=113 Identities=31% Similarity=0.406 Sum_probs=78.9
Q ss_pred EEEee-cCCCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----
Q 044507 16 MHIAE-KGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTV---- 90 (157)
Q Consensus 16 ~~~~~-~~~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~---- 90 (157)
+.+.. .++-|++||+||+......|..+.++++++||.||.+|+.......... ......+.++++.+-++..
T Consensus 8 v~~P~~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~--~~~~~~~vi~Wl~~~L~~~l~~~ 85 (259)
T PF12740_consen 8 VYYPSSAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTD--EVASAAEVIDWLAKGLESKLPLG 85 (259)
T ss_pred EEecCCCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcch--hHHHHHHHHHHHHhcchhhcccc
Confidence 44443 3456999999999987777999999999999999999976533211111 1122223333333322211
Q ss_pred -CCCCCcEEEEEEcHHHHHHHHHHhcC-----ccceeEEEEeeccc
Q 044507 91 -APNDEKVFVVGHDWGAFMAWFLCLFR-----PDRVKALVNLSVVF 130 (157)
Q Consensus 91 -~~~~~~i~l~G~S~Gg~~a~~~~~~~-----~~~~~~~i~~~~~~ 130 (157)
..+..++.+.|||.||-++..++..+ +.+++++++++|.-
T Consensus 86 v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 86 VKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred ccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 11557999999999999999888887 45899999999876
No 81
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.43 E-value=1.6e-12 Score=73.87 Aligned_cols=75 Identities=25% Similarity=0.354 Sum_probs=60.6
Q ss_pred CEEEEEeecC---C-CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 044507 13 GINMHIAEKG---Q-GPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLID 88 (157)
Q Consensus 13 g~~~~~~~~~---~-~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~ 88 (157)
|.+|++..+. + +.+|+++||.+....-|..+++.|+++||.|+++|+||+|.|..... ...+.++.++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg-~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRG-HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCccc-ccCCHHHHHHHHHHHhC
Confidence 4566665433 2 56999999999999999999999999999999999999999986442 35677788888887763
No 82
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.41 E-value=7e-12 Score=85.35 Aligned_cols=102 Identities=14% Similarity=0.130 Sum_probs=83.1
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcH
Q 044507 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDW 104 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~ 104 (157)
++|+++|+.+|+...|.++++.+....+.|+.++.+|.+.... ...+.++.+..+.+.+...... .++.++|||+
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~----~~~si~~la~~y~~~I~~~~~~-gp~~L~G~S~ 75 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP----PPDSIEELASRYAEAIRARQPE-GPYVLAGWSF 75 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH----EESSHHHHHHHHHHHHHHHTSS-SSEEEEEETH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC----CCCCHHHHHHHHHHHhhhhCCC-CCeeehccCc
Confidence 4799999999999999999999987558999999999883322 4578888999888888887432 3999999999
Q ss_pred HHHHHHHHHhc---CccceeEEEEeecccC
Q 044507 105 GAFMAWFLCLF---RPDRVKALVNLSVVFN 131 (157)
Q Consensus 105 Gg~~a~~~~~~---~~~~~~~~i~~~~~~~ 131 (157)
||.+|..+|.+ ....+..+++++++.+
T Consensus 76 Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 76 GGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred cHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 99999999886 3456889999986554
No 83
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.37 E-value=5.3e-12 Score=89.17 Aligned_cols=116 Identities=25% Similarity=0.489 Sum_probs=97.2
Q ss_pred ceeEEEECCEEEEEeecC-------CC-CEEEEeCCCCCchhhHHHHHHHHHhC---------CCEEEecCCCCCCCCCC
Q 044507 5 QHRIVKVNGINMHIAEKG-------QG-PVILFLHGFPELWYSWRHQITALASL---------GYRAVAPDLRGFGDTDA 67 (157)
Q Consensus 5 ~~~~~~~~g~~~~~~~~~-------~~-p~vl~~hG~~~~~~~~~~~~~~l~~~---------g~~v~~~d~~g~g~s~~ 67 (157)
+.-.++|.|.++|+..-. ++ .|++++||++|+...+..++..|.+. -+.|++|..||+|.|+.
T Consensus 125 ~qykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~ 204 (469)
T KOG2565|consen 125 KQYKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDA 204 (469)
T ss_pred hhhhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcC
Confidence 445678899999987422 22 38999999999999998888777754 27999999999999988
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEE
Q 044507 68 PPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKAL 123 (157)
Q Consensus 68 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~ 123 (157)
+.. ...+..+.+.-++.++-++ +-.+..+-|--+|+.++..++..+|+.+.++
T Consensus 205 ~sk-~GFn~~a~ArvmrkLMlRL--g~nkffiqGgDwGSiI~snlasLyPenV~Gl 257 (469)
T KOG2565|consen 205 PSK-TGFNAAATARVMRKLMLRL--GYNKFFIQGGDWGSIIGSNLASLYPENVLGL 257 (469)
T ss_pred Ccc-CCccHHHHHHHHHHHHHHh--CcceeEeecCchHHHHHHHHHhhcchhhhHh
Confidence 764 4677777788888888888 8899999999999999999999999988876
No 84
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.36 E-value=3.6e-11 Score=81.07 Aligned_cols=108 Identities=19% Similarity=0.164 Sum_probs=69.6
Q ss_pred CCCEEEEeCCCCCchhhHHHH---HHHHHhCCCEEEecCCCCC----CCCCC-CC-CCCCCCHHHHHHH-HHHHHHHhCC
Q 044507 23 QGPVILFLHGFPELWYSWRHQ---ITALASLGYRAVAPDLRGF----GDTDA-PP-DVTSYTCFHVIGD-LVGLIDTVAP 92 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~---~~~l~~~g~~v~~~d~~g~----g~s~~-~~-~~~~~~~~~~~~~-l~~~~~~~~~ 92 (157)
+.|.||++||.+++...+... .+...++||.|+.|+.... +.... .. .....+....+.. +..+..+...
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 348999999999998876432 3333445899999986421 11111 10 0011111112222 2233333334
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeeccc
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
+..+|++.|+|.||+++..++..+|+.|.++..+++..
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 78999999999999999999999999999988877643
No 85
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.35 E-value=3.8e-12 Score=84.02 Aligned_cols=116 Identities=15% Similarity=0.273 Sum_probs=87.3
Q ss_pred CCEEEEEe---ecCCCCEEEEeCCCCCchhhHHHHHHHHHhC-CCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 044507 12 NGINMHIA---EKGQGPVILFLHGFPELWYSWRHQITALASL-GYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLI 87 (157)
Q Consensus 12 ~g~~~~~~---~~~~~p~vl~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~ 87 (157)
|.+.+.-+ ...+.|+++++|+..|+-....+.++-+-.+ +.+|+.+++||+|.|...+.+..... |-..++
T Consensus 63 D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~l-----Ds~avl 137 (300)
T KOG4391|consen 63 DKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKL-----DSEAVL 137 (300)
T ss_pred cceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceec-----cHHHHH
Confidence 66666532 3336799999999999988887777766544 89999999999999987663332222 223333
Q ss_pred HHhCC----CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 88 DTVAP----NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 88 ~~~~~----~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
+++.. +..++++.|.|.||.+|+.++.++.+++.++|+-.+..+.
T Consensus 138 dyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 138 DYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSI 186 (300)
T ss_pred HHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccc
Confidence 33332 5689999999999999999999999999999988776553
No 86
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.34 E-value=1.1e-10 Score=80.76 Aligned_cols=126 Identities=18% Similarity=0.163 Sum_probs=85.3
Q ss_pred eEEEECCEEEEEeecC----CCCEEEEeCCCCCchhh-HHHH-----HHHHHhCCCEEEecCCCCCCCC--CCCCCCCCC
Q 044507 7 RIVKVNGINMHIAEKG----QGPVILFLHGFPELWYS-WRHQ-----ITALASLGYRAVAPDLRGFGDT--DAPPDVTSY 74 (157)
Q Consensus 7 ~~~~~~g~~~~~~~~~----~~p~vl~~hG~~~~~~~-~~~~-----~~~l~~~g~~v~~~d~~g~g~s--~~~~~~~~~ 74 (157)
+.++..-..+++...| ++|++|-+|..|.+... |..+ ...+.++ +.++-+|.||+... .-+.+....
T Consensus 2 h~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yP 80 (283)
T PF03096_consen 2 HDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYP 80 (283)
T ss_dssp EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT----
T ss_pred ceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCccccccccccc
Confidence 4566666666665444 47999999999988766 6555 3556665 99999999998654 334555678
Q ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCCCC
Q 044507 75 TCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPFGS 135 (157)
Q Consensus 75 ~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~~ 135 (157)
++++.++++.++++++ +.+.++.+|-..||.+..++|.++|+++.++|++++......-
T Consensus 81 smd~LAe~l~~Vl~~f--~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw 139 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHF--GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGW 139 (283)
T ss_dssp -HHHHHCTHHHHHHHH--T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---H
T ss_pred CHHHHHHHHHHHHHhC--CccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccH
Confidence 9999999999999999 8899999999999999999999999999999999987765433
No 87
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.33 E-value=2.8e-11 Score=93.34 Aligned_cols=126 Identities=26% Similarity=0.381 Sum_probs=85.7
Q ss_pred cceeEEEE-CCEEEEEee---cC----C-CCEEEEeCCCCCc--hhhHHHHHHHHHhCCCEEEecCCCCCCC---CCCC-
Q 044507 4 IQHRIVKV-NGINMHIAE---KG----Q-GPVILFLHGFPEL--WYSWRHQITALASLGYRAVAPDLRGFGD---TDAP- 68 (157)
Q Consensus 4 ~~~~~~~~-~g~~~~~~~---~~----~-~p~vl~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~---s~~~- 68 (157)
.|...+.. ||..++.+. .+ + -|+||++||.+.. ...+....+.+..+||.|+.+|+||... ....
T Consensus 365 ~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~ 444 (620)
T COG1506 365 PEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADA 444 (620)
T ss_pred ceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHh
Confidence 44445555 677777542 11 1 2899999999743 3346778889999999999999997533 2111
Q ss_pred --CCCCCCCHHHHHHHHHHHHHHhC-CCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 69 --PDVTSYTCFHVIGDLVGLIDTVA-PNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 69 --~~~~~~~~~~~~~~l~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
.+......++..+.+. .+.... .+.+++.+.|+|+||.+++..+...| .+++.+...+..+
T Consensus 445 ~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~ 508 (620)
T COG1506 445 IRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVD 508 (620)
T ss_pred hhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcch
Confidence 1223345555555555 333332 26689999999999999999999998 6877777766544
No 88
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.31 E-value=1.8e-11 Score=82.83 Aligned_cols=113 Identities=24% Similarity=0.255 Sum_probs=65.7
Q ss_pred cCCCCEEEEeCCCCCchhhHHHHHH-HHHhCCCEEEecCCCC------CCC---CCCCC---CC-C---CCCHHHHHHHH
Q 044507 21 KGQGPVILFLHGFPELWYSWRHQIT-ALASLGYRAVAPDLRG------FGD---TDAPP---DV-T---SYTCFHVIGDL 83 (157)
Q Consensus 21 ~~~~p~vl~~hG~~~~~~~~~~~~~-~l~~~g~~v~~~d~~g------~g~---s~~~~---~~-~---~~~~~~~~~~l 83 (157)
....|+||++||+|.+...+..... .+......+++++-|. .|. ++... .. . .....+....+
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 3356899999999999866665554 2233457777776542 222 22211 00 0 11223334445
Q ss_pred HHHHHHhC---CCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCC
Q 044507 84 VGLIDTVA---PNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPF 133 (157)
Q Consensus 84 ~~~~~~~~---~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~ 133 (157)
.++++... .+.++|++.|+|+||++++.++..+|..+++++.+++.....
T Consensus 91 ~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~ 143 (216)
T PF02230_consen 91 DELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPE 143 (216)
T ss_dssp HHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTG
T ss_pred HHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccc
Confidence 55555322 256899999999999999999999999999999999876543
No 89
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.31 E-value=2e-11 Score=85.32 Aligned_cols=108 Identities=20% Similarity=0.256 Sum_probs=74.1
Q ss_pred CCCEEEEeCCCCCchhh-H-HHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCCcEE
Q 044507 23 QGPVILFLHGFPELWYS-W-RHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP--NDEKVF 98 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~-~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~ 98 (157)
.+|.||++||..|+..+ | +.+.+.+.++|+.+|+++.||++.+..... ...-.-+..|+..+++.++. ...++.
T Consensus 74 ~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p--~~yh~G~t~D~~~~l~~l~~~~~~r~~~ 151 (345)
T COG0429 74 KKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP--RLYHSGETEDIRFFLDWLKARFPPRPLY 151 (345)
T ss_pred CCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc--ceecccchhHHHHHHHHHHHhCCCCceE
Confidence 45899999998765433 4 677889999999999999999998765331 11111122455555555432 568999
Q ss_pred EEEEcHHHHHHHHHHhcCcc--ceeEEEEeecccCC
Q 044507 99 VVGHDWGAFMAWFLCLFRPD--RVKALVNLSVVFNP 132 (157)
Q Consensus 99 l~G~S~Gg~~a~~~~~~~~~--~~~~~i~~~~~~~~ 132 (157)
.+|.|+||.+...++.+..+ .+.+.+.++.+.+.
T Consensus 152 avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl 187 (345)
T COG0429 152 AVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDL 187 (345)
T ss_pred EEEecccHHHHHHHHHhhccCcccceeeeeeCHHHH
Confidence 99999999666555555433 35677777766653
No 90
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.30 E-value=2.5e-11 Score=82.23 Aligned_cols=105 Identities=29% Similarity=0.348 Sum_probs=72.3
Q ss_pred CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCC-CCCCCCCCCC--------CHHHHHHHHHHHHHHhCCC
Q 044507 23 QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGD-TDAPPDVTSY--------TCFHVIGDLVGLIDTVAPN 93 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~-s~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~ 93 (157)
+.|.||++|++.|-....+.+++.|+++||.|++||+.+... .......... ..+....++...++.+...
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 458999999999888888899999999999999999864433 1111000000 0234455666666666543
Q ss_pred ----CCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeec
Q 044507 94 ----DEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSV 128 (157)
Q Consensus 94 ----~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~ 128 (157)
.++|.++|+|+||.+++.++... ..+++.+...|
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 37999999999999999999887 56888888877
No 91
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.29 E-value=8.3e-11 Score=82.27 Aligned_cols=107 Identities=26% Similarity=0.310 Sum_probs=75.5
Q ss_pred CEEEEeCCCCCchhh-HHH---------HHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--
Q 044507 25 PVILFLHGFPELWYS-WRH---------QITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP-- 92 (157)
Q Consensus 25 p~vl~~hG~~~~~~~-~~~---------~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~-- 92 (157)
|+||..++++..... ... ....+.++||.||..|.||.|.|....... .....+|..+.|+.+..
T Consensus 21 P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~---~~~e~~D~~d~I~W~~~Qp 97 (272)
T PF02129_consen 21 PVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM---SPNEAQDGYDTIEWIAAQP 97 (272)
T ss_dssp EEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT---SHHHHHHHHHHHHHHHHCT
T ss_pred cEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC---ChhHHHHHHHHHHHHHhCC
Confidence 788889999864311 111 112389999999999999999998764322 44566677777776643
Q ss_pred -CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCCC
Q 044507 93 -NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPFG 134 (157)
Q Consensus 93 -~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~ 134 (157)
...+|.++|.|++|..++..|...|..+++++...+..+...
T Consensus 98 ws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 98 WSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp TEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred CCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 346999999999999999999988889999999988776544
No 92
>PRK10115 protease 2; Provisional
Probab=99.28 E-value=1.3e-10 Score=90.45 Aligned_cols=123 Identities=13% Similarity=0.150 Sum_probs=89.6
Q ss_pred ECCEEEEEe----e----cCCCCEEEEeCCCCCch--hhHHHHHHHHHhCCCEEEecCCCCCCCC---CCCC---CCCCC
Q 044507 11 VNGINMHIA----E----KGQGPVILFLHGFPELW--YSWRHQITALASLGYRAVAPDLRGFGDT---DAPP---DVTSY 74 (157)
Q Consensus 11 ~~g~~~~~~----~----~~~~p~vl~~hG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~g~g~s---~~~~---~~~~~ 74 (157)
-||.+|++. + .++.|+||++||..+.. ..|......|.++||.|+.++.||.|.- .... .....
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~ 503 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKN 503 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCC
Confidence 388887742 2 23458999999987654 4466667788999999999999986543 2111 11234
Q ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCC
Q 044507 75 TCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPF 133 (157)
Q Consensus 75 ~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~ 133 (157)
+..+.+..+..+++.-..+.+++.+.|.|+||.++...+..+|++++++|+..|..+..
T Consensus 504 ~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~ 562 (686)
T PRK10115 504 TFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVV 562 (686)
T ss_pred cHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHh
Confidence 55555555555555433367999999999999999999999999999999998877743
No 93
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.27 E-value=2.3e-11 Score=82.11 Aligned_cols=99 Identities=25% Similarity=0.375 Sum_probs=66.6
Q ss_pred hHHHHHHHHHhCCCEEEecCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHhC----CCCCcEEEEEEcHHHHHHHHH
Q 044507 39 SWRHQITALASLGYRAVAPDLRGFGDTDAP--PDVTSYTCFHVIGDLVGLIDTVA----PNDEKVFVVGHDWGAFMAWFL 112 (157)
Q Consensus 39 ~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~--~~~~~~~~~~~~~~l~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~ 112 (157)
+|......|+++||.|+.+|+||.+..... .......-....+|+.+.++.+. .+.++|.++|+|+||.+++.+
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 345567889999999999999987643110 00011112233445555555443 267899999999999999999
Q ss_pred HhcCccceeEEEEeecccCCCCCch
Q 044507 113 CLFRPDRVKALVNLSVVFNPFGSIN 137 (157)
Q Consensus 113 ~~~~~~~~~~~i~~~~~~~~~~~~~ 137 (157)
+..+|+.+++++..++..+......
T Consensus 82 ~~~~~~~f~a~v~~~g~~d~~~~~~ 106 (213)
T PF00326_consen 82 ATQHPDRFKAAVAGAGVSDLFSYYG 106 (213)
T ss_dssp HHHTCCGSSEEEEESE-SSTTCSBH
T ss_pred hcccceeeeeeeccceecchhcccc
Confidence 9999999999999999887655543
No 94
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.27 E-value=1.2e-10 Score=79.66 Aligned_cols=106 Identities=28% Similarity=0.321 Sum_probs=80.1
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCC-CCCCCCC-C----C----CCCCHHHHHHHHHHHHHHhCC--
Q 044507 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGF-GDTDAPP-D----V----TSYTCFHVIGDLVGLIDTVAP-- 92 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-g~s~~~~-~----~----~~~~~~~~~~~l~~~~~~~~~-- 92 (157)
|.||++|++.|-....+.+++.|++.||.+++||+.+. |.+.... . . ...+..+...++...++.+..
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 89999999999989999999999999999999998652 2222111 0 0 112235666677777777653
Q ss_pred --CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 93 --NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 93 --~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
+.++|.++|+||||.+++.++...| .+++.+...+...
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~ 147 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLI 147 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCC
Confidence 3578999999999999999999887 6777777765443
No 95
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.27 E-value=6.5e-10 Score=76.50 Aligned_cols=125 Identities=19% Similarity=0.189 Sum_probs=98.9
Q ss_pred ceeEEEECCEEEEEeecC----CCCEEEEeCCCCCchhh-HHHH-----HHHHHhCCCEEEecCCCCCCCC--CCCCCCC
Q 044507 5 QHRIVKVNGINMHIAEKG----QGPVILFLHGFPELWYS-WRHQ-----ITALASLGYRAVAPDLRGFGDT--DAPPDVT 72 (157)
Q Consensus 5 ~~~~~~~~g~~~~~~~~~----~~p~vl~~hG~~~~~~~-~~~~-----~~~l~~~g~~v~~~d~~g~g~s--~~~~~~~ 72 (157)
+++-++.....+++...| ++|++|-+|+.+.+... |..+ ...+.++ +-++-+|.||+-.. .-+.+..
T Consensus 23 ~e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~ 101 (326)
T KOG2931|consen 23 QEHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYP 101 (326)
T ss_pred eeeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCC
Confidence 344444444555544333 47899999999988766 5444 4567777 99999999998544 3345556
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 73 SYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 73 ~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
..++++.++++..+++++ +.+.++.+|-..|+++..++|..+|+++.++|++++....
T Consensus 102 yPsmd~LAd~l~~VL~~f--~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a 159 (326)
T KOG2931|consen 102 YPSMDDLADMLPEVLDHF--GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCA 159 (326)
T ss_pred CCCHHHHHHHHHHHHHhc--CcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCC
Confidence 789999999999999999 8899999999999999999999999999999999876553
No 96
>COG0400 Predicted esterase [General function prediction only]
Probab=99.25 E-value=7.3e-11 Score=78.80 Aligned_cols=111 Identities=17% Similarity=0.126 Sum_probs=76.1
Q ss_pred CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCC--CCC--CCCCCCCCCCHHH-------HHHHHHHHHHHhC
Q 044507 23 QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGF--GDT--DAPPDVTSYTCFH-------VIGDLVGLIDTVA 91 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~--g~s--~~~~~~~~~~~~~-------~~~~l~~~~~~~~ 91 (157)
..|+||++||.|++..++.+..+.+..+ +.++.+.-+-- |.. ....+...++.++ .++.+....++..
T Consensus 17 ~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~g 95 (207)
T COG0400 17 AAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYG 95 (207)
T ss_pred CCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 4468999999999999998877777766 77777764421 110 0011112223332 2223334444443
Q ss_pred CCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCCC
Q 044507 92 PNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPFG 134 (157)
Q Consensus 92 ~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~ 134 (157)
.+.++++++|+|.|+++++.+...+|+.+++++++++......
T Consensus 96 i~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~ 138 (207)
T COG0400 96 IDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP 138 (207)
T ss_pred CChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC
Confidence 3568999999999999999999999999999999998766543
No 97
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.23 E-value=1.7e-10 Score=81.91 Aligned_cols=118 Identities=17% Similarity=0.197 Sum_probs=86.6
Q ss_pred CCEEEEEeecCC-----CCEEEEeCCCCCchhhHH-------HHHHHHH-------hCCCEEEecCCCCCC-CCCCC---
Q 044507 12 NGINMHIAEKGQ-----GPVILFLHGFPELWYSWR-------HQITALA-------SLGYRAVAPDLRGFG-DTDAP--- 68 (157)
Q Consensus 12 ~g~~~~~~~~~~-----~p~vl~~hG~~~~~~~~~-------~~~~~l~-------~~g~~v~~~d~~g~g-~s~~~--- 68 (157)
++..+.|..+|+ ...|+++|++.++..... .+.+.+. -..|-|++.|..|.+ .|..+
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 456777887762 258999999988543332 1233333 234899999998864 22222
Q ss_pred --------CCCCCCCHHHHHHHHHHHHHHhCCCCCcEE-EEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 69 --------PDVTSYTCFHVIGDLVGLIDTVAPNDEKVF-VVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 69 --------~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
.+.+..++++.+..-..+++++ +.+++. ++|-||||+.++.++..+|++++.++.+++...
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~L--GI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r 183 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDAL--GIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAAR 183 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhc--CcceEeeeeccChHHHHHHHHHHhChHHHhhhheeccccc
Confidence 1235678888888888888999 778877 999999999999999999999999998887543
No 98
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.23 E-value=1.8e-10 Score=85.05 Aligned_cols=121 Identities=19% Similarity=0.308 Sum_probs=82.8
Q ss_pred eEEEE-CCEEEEEeec--CCCCEEEEeC-CC---CCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHH
Q 044507 7 RIVKV-NGINMHIAEK--GQGPVILFLH-GF---PELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHV 79 (157)
Q Consensus 7 ~~~~~-~g~~~~~~~~--~~~p~vl~~h-G~---~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~ 79 (157)
.+... +|+.+.+... +.. .+-++. .. ......|..+++.|.+.||.+ ..|++|+|.++.... ...+.
T Consensus 71 ~~~~~~~gv~i~vp~~~~g~~-~i~~ldp~~~~~~~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~----~~~~~ 144 (440)
T PLN02733 71 KTVSLDPKTEIVVPDDRYGLY-AIDILDPDVIIRLDEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSN----RLPET 144 (440)
T ss_pred ceecCCCCceEEcCCCCCCce-eeEEecCccccCcchHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccc----cHHHH
Confidence 34455 4777776642 322 222222 11 345677899999999999766 889999998876431 23344
Q ss_pred HHHHHHHHHHhCC--CCCcEEEEEEcHHHHHHHHHHhcCcc----ceeEEEEeecccCCC
Q 044507 80 IGDLVGLIDTVAP--NDEKVFVVGHDWGAFMAWFLCLFRPD----RVKALVNLSVVFNPF 133 (157)
Q Consensus 80 ~~~l~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~----~~~~~i~~~~~~~~~ 133 (157)
.+++.+.++.+.. +..+++++||||||.++..++..+|+ .++.+|+++++....
T Consensus 145 ~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 145 MDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 5555555554432 56899999999999999999988875 378899998876643
No 99
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.22 E-value=7.4e-11 Score=80.01 Aligned_cols=109 Identities=31% Similarity=0.373 Sum_probs=77.2
Q ss_pred cCCCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCC-----CC
Q 044507 21 KGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDV-TSYTCFHVIGDLVGLIDTVAP-----ND 94 (157)
Q Consensus 21 ~~~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~-~~~~~~~~~~~l~~~~~~~~~-----~~ 94 (157)
.|+.|+|+|+||+.-...-|..+.++++++||.|++|+....-. +... ...+....++++..-++.+.. +.
T Consensus 43 ~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl 119 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP---PDGQDEIKSAASVINWLPEGLQHVLPENVEANL 119 (307)
T ss_pred CCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC---CCchHHHHHHHHHHHHHHhhhhhhCCCCccccc
Confidence 34569999999999998899999999999999999999864211 1110 112223334444444443322 45
Q ss_pred CcEEEEEEcHHHHHHHHHHhcCc--cceeEEEEeecccCC
Q 044507 95 EKVFVVGHDWGAFMAWFLCLFRP--DRVKALVNLSVVFNP 132 (157)
Q Consensus 95 ~~i~l~G~S~Gg~~a~~~~~~~~--~~~~~~i~~~~~~~~ 132 (157)
.++.++|||.||-.|..+|..+. -++.++|.++|....
T Consensus 120 ~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 120 SKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred ceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 79999999999999988888764 347888888876553
No 100
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.17 E-value=6.5e-11 Score=79.66 Aligned_cols=101 Identities=20% Similarity=0.209 Sum_probs=62.9
Q ss_pred EEEeCCCC---CchhhHHHHHHHHHh-CCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCCCCcEEE
Q 044507 27 ILFLHGFP---ELWYSWRHQITALAS-LGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDT---VAPNDEKVFV 99 (157)
Q Consensus 27 vl~~hG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~i~l 99 (157)
||++||.+ ++......+...+++ .|+.|+.+|+|=..+.. .....++....+.-+++. +..+.++|++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~-----~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAP-----FPAALEDVKAAYRWLLKNADKLGIDPERIVL 75 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSS-----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccc-----ccccccccccceeeeccccccccccccceEE
Confidence 78999986 444555666666665 79999999998432221 112222222223333332 2225689999
Q ss_pred EEEcHHHHHHHHHHhcCcc----ceeEEEEeecccCC
Q 044507 100 VGHDWGAFMAWFLCLFRPD----RVKALVNLSVVFNP 132 (157)
Q Consensus 100 ~G~S~Gg~~a~~~~~~~~~----~~~~~i~~~~~~~~ 132 (157)
+|+|.||.+++.++....+ .++++++++|..+.
T Consensus 76 ~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 9999999999999886433 48999999997655
No 101
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.17 E-value=4.9e-10 Score=73.01 Aligned_cols=89 Identities=20% Similarity=0.234 Sum_probs=62.8
Q ss_pred EEEeCCCCCc-hhhHHHH-HHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcH
Q 044507 27 ILFLHGFPEL-WYSWRHQ-ITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDW 104 (157)
Q Consensus 27 vl~~hG~~~~-~~~~~~~-~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~ 104 (157)
|+++||++++ ..+|.+. .+.+.+. ++|..+++ ...+.+++...+.+.+..+ .+++++||||.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------------~~P~~~~W~~~l~~~i~~~---~~~~ilVaHSL 64 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------------DNPDLDEWVQALDQAIDAI---DEPTILVAHSL 64 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------------TS--HHHHHHHHHHCCHC----TTTEEEEEETH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------------CCCCHHHHHHHHHHHHhhc---CCCeEEEEeCH
Confidence 6899999876 4567554 5566665 77777776 2346777888888877765 35799999999
Q ss_pred HHHHHHHHH-hcCccceeEEEEeecccC
Q 044507 105 GAFMAWFLC-LFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 105 Gg~~a~~~~-~~~~~~~~~~i~~~~~~~ 131 (157)
|+..+++++ .....+++++++++|+..
T Consensus 65 Gc~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 65 GCLTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred HHHHHHHHHhhcccccccEEEEEcCCCc
Confidence 999999999 677789999999998754
No 102
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.16 E-value=5.6e-10 Score=77.00 Aligned_cols=124 Identities=23% Similarity=0.258 Sum_probs=81.4
Q ss_pred ceeEEEECCEEEEEee---c---CCCCEEEEeCCCCCchhhHHHHH--HHHHhC-CCEEEecCCCCC-------CCCCCC
Q 044507 5 QHRIVKVNGINMHIAE---K---GQGPVILFLHGFPELWYSWRHQI--TALASL-GYRAVAPDLRGF-------GDTDAP 68 (157)
Q Consensus 5 ~~~~~~~~g~~~~~~~---~---~~~p~vl~~hG~~~~~~~~~~~~--~~l~~~-g~~v~~~d~~g~-------g~s~~~ 68 (157)
+...+..++....|+- . .+.|.||++||..++...+.... +.++++ |+.|+.||.... +.+..+
T Consensus 36 ~~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p 115 (312)
T COG3509 36 SVASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGP 115 (312)
T ss_pred CccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCc
Confidence 3455666776655541 1 23479999999999888776554 555554 999999964321 111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh----CCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeeccc
Q 044507 69 PDVTSYTCFHVIGDLVGLIDTV----APNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 69 ~~~~~~~~~~~~~~l~~~~~~~----~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
. ....-.+.+..|.+++..+ ..++++|++.|.|.||.++..++..+|+.+.++-.+++..
T Consensus 116 ~--~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 116 A--DRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred c--cccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 1 1111222333444444443 3377899999999999999999999999999988887665
No 103
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.16 E-value=4.8e-10 Score=84.22 Aligned_cols=105 Identities=11% Similarity=0.123 Sum_probs=81.9
Q ss_pred CCEEEEeCCCCCchhhH-----HHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCCc
Q 044507 24 GPVILFLHGFPELWYSW-----RHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP--NDEK 96 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~ 96 (157)
++|||+++.+-....-+ +++++.|.++|+.|+++|++.-+... ...++++.++.+.+.++.+.. +.++
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~-----r~~~ldDYv~~i~~Ald~V~~~tG~~~ 289 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH-----REWGLSTYVDALKEAVDAVRAITGSRD 289 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh-----cCCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 36999999876332222 67899999999999999998633331 456778877777777777654 5689
Q ss_pred EEEEEEcHHHHHHHH----HHhcCcc-ceeEEEEeecccCCC
Q 044507 97 VFVVGHDWGAFMAWF----LCLFRPD-RVKALVNLSVVFNPF 133 (157)
Q Consensus 97 i~l~G~S~Gg~~a~~----~~~~~~~-~~~~~i~~~~~~~~~ 133 (157)
++++|+|+||.++.. +++++++ +|+.++++.++.+..
T Consensus 290 vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 290 LNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred eeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 999999999999986 7788885 799999999888743
No 104
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=99.16 E-value=5.6e-10 Score=82.97 Aligned_cols=121 Identities=21% Similarity=0.254 Sum_probs=81.8
Q ss_pred CCEEEEeCCCCCchhh-H--HHHHHHHHhC-CCEEEecCCCCCCCCCCCC-----CCCCCCHHHHHHHHHHHHHHhCC--
Q 044507 24 GPVILFLHGFPELWYS-W--RHQITALASL-GYRAVAPDLRGFGDTDAPP-----DVTSYTCFHVIGDLVGLIDTVAP-- 92 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~-~--~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~-----~~~~~~~~~~~~~l~~~~~~~~~-- 92 (157)
+|++|++.|- +.... + ..+...++++ |..++.+++|-+|.|.+.. ...-.+.++..+|+..+++++..
T Consensus 29 gpifl~~ggE-~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 29 GPIFLYIGGE-GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp SEEEEEE--S-S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCC-CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 5666666444 43332 2 3344555554 8899999999999997642 34568899999999999988762
Q ss_pred ---CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCCCCchHHHHHHHh
Q 044507 93 ---NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPFGSINNVIEALRA 145 (157)
Q Consensus 93 ---~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 145 (157)
...|++++|-|+||+++..+-.++|+.+.+.++-+++......+.+......+
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a~~df~~y~~~v~~ 163 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQAKVDFWEYFEVVTE 163 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCHCCTTTHHHHHHHH
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeeeecccHHHHHHHHH
Confidence 34689999999999999999999999999999999998877777666655543
No 105
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.15 E-value=7e-10 Score=73.30 Aligned_cols=111 Identities=20% Similarity=0.291 Sum_probs=85.8
Q ss_pred CCCCEEEEeCCCCCchhh--HHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCCcEE
Q 044507 22 GQGPVILFLHGFPELWYS--WRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP-NDEKVF 98 (157)
Q Consensus 22 ~~~p~vl~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~i~ 98 (157)
++..++|++||+-.+... ...++..+.+.|+.++-+|++|.|+|...-....+.. .++|+..+++.++. ...--+
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~--eadDL~sV~q~~s~~nr~v~v 108 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNT--EADDLHSVIQYFSNSNRVVPV 108 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccc--hHHHHHHHHHHhccCceEEEE
Confidence 345799999999876543 3556788889999999999999999987654344443 35899999998864 223356
Q ss_pred EEEEcHHHHHHHHHHhcCccceeEEEEeecccCCCCC
Q 044507 99 VVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPFGS 135 (157)
Q Consensus 99 l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~~ 135 (157)
++|||-||.+++.++.++.+ +..+|.+++-++....
T Consensus 109 i~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~ 144 (269)
T KOG4667|consen 109 ILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNG 144 (269)
T ss_pred EEeecCccHHHHHHHHhhcC-chheEEcccccchhcc
Confidence 89999999999999999987 8888888877664443
No 106
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.15 E-value=5.9e-11 Score=79.92 Aligned_cols=102 Identities=21% Similarity=0.282 Sum_probs=60.2
Q ss_pred CEEEEeCCCCC-chhhHHHHHHHHHhCCCE---EEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCCcEE
Q 044507 25 PVILFLHGFPE-LWYSWRHQITALASLGYR---AVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP--NDEKVF 98 (157)
Q Consensus 25 p~vl~~hG~~~-~~~~~~~~~~~l~~~g~~---v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~ 98 (157)
.||||+||.++ ....|..+...|.++||. ++.+++-......... ......+.++++.++++.+.. +. +|-
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~--~~~~~~~~~~~l~~fI~~Vl~~TGa-kVD 78 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQ--NAHMSCESAKQLRAFIDAVLAYTGA-KVD 78 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHH--HHHB-HHHHHHHHHHHHHHHHHHT---EE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCccc--ccccchhhHHHHHHHHHHHHHhhCC-EEE
Confidence 48999999998 678899999999999998 7888874332211110 001122344667766666543 55 999
Q ss_pred EEEEcHHHHHHHHHHhcC-------------ccceeEEEEeecc
Q 044507 99 VVGHDWGAFMAWFLCLFR-------------PDRVKALVNLSVV 129 (157)
Q Consensus 99 l~G~S~Gg~~a~~~~~~~-------------~~~~~~~i~~~~~ 129 (157)
|+|||+|+.++..+.... +.++...|.++++
T Consensus 79 IVgHS~G~~iaR~yi~~~~~~d~~~~lg~~~~~~v~t~v~lag~ 122 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIKGGGGADKVVNLGPPLTSKVGTFVGLAGA 122 (219)
T ss_dssp EEEETCHHHHHHHHHHHCTGGGTEEE----GGG-EEEEEEES--
T ss_pred EEEcCCcCHHHHHHHHHcCCCCcccCcccccccccccccccccc
Confidence 999999999998887642 2346666666643
No 107
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.14 E-value=6.4e-10 Score=76.64 Aligned_cols=110 Identities=21% Similarity=0.263 Sum_probs=73.9
Q ss_pred CCEEEEeCCCCCchhhHHHHHHHHH-hCCC----EEEecCCCCC----CCCC----CC------CCCCCCCHHHHHHHHH
Q 044507 24 GPVILFLHGFPELWYSWRHQITALA-SLGY----RAVAPDLRGF----GDTD----AP------PDVTSYTCFHVIGDLV 84 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~~~~~~l~-~~g~----~v~~~d~~g~----g~s~----~~------~~~~~~~~~~~~~~l~ 84 (157)
..|.||+||++++...+..+++.+. +.|. -++-++.-|. |.-. .+ .+....+....+.++.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 3589999999999999999999997 6542 2333343332 2211 11 1112246777888888
Q ss_pred HHHHHhCC--CCCcEEEEEEcHHHHHHHHHHhcCcc-----ceeEEEEeecccCCC
Q 044507 85 GLIDTVAP--NDEKVFVVGHDWGAFMAWFLCLFRPD-----RVKALVNLSVVFNPF 133 (157)
Q Consensus 85 ~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~-----~~~~~i~~~~~~~~~ 133 (157)
.++..+.. +..++.+|||||||..+..++..+.. ++..+|+++++++..
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTT
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcc
Confidence 88888765 57899999999999999999887532 589999999988854
No 108
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.13 E-value=3.1e-09 Score=73.15 Aligned_cols=101 Identities=17% Similarity=0.187 Sum_probs=86.1
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcH
Q 044507 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDW 104 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~ 104 (157)
|+++++|+..|....|.++...+... ..++..+.+|++.... ...++++.++...+.|...+ ...++.++|||+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~----~~~~l~~~a~~yv~~Ir~~Q-P~GPy~L~G~S~ 74 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQ----PFASLDDMAAAYVAAIRRVQ-PEGPYVLLGWSL 74 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccccc----ccCCHHHHHHHHHHHHHHhC-CCCCEEEEeecc
Confidence 68999999999999999999999988 9999999999885322 45678888888888888875 447999999999
Q ss_pred HHHHHHHHHhc---CccceeEEEEeecccC
Q 044507 105 GAFMAWFLCLF---RPDRVKALVNLSVVFN 131 (157)
Q Consensus 105 Gg~~a~~~~~~---~~~~~~~~i~~~~~~~ 131 (157)
||.+|...|.+ ..+.+..++++++...
T Consensus 75 GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 75 GGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999998886 4557889999988776
No 109
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.12 E-value=6.4e-11 Score=84.63 Aligned_cols=111 Identities=20% Similarity=0.310 Sum_probs=67.0
Q ss_pred CCCEEEEeCCCCCch--hhH-HHHHHHH-Hh--CCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----C
Q 044507 23 QGPVILFLHGFPELW--YSW-RHQITAL-AS--LGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVA----P 92 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~--~~~-~~~~~~l-~~--~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~----~ 92 (157)
++|++|++||+.++. ..| ..+.+.+ .. .+++|+++|+......... ............+..+++.+. .
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~--~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYP--QAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HH--HHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccccc--chhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 568999999998776 345 4445544 44 4799999999532211100 011223334444444444443 3
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcCcc--ceeEEEEeecccCCCCC
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFRPD--RVKALVNLSVVFNPFGS 135 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~~~--~~~~~i~~~~~~~~~~~ 135 (157)
..++++++|||+||.+|...+..... ++..|+.++|+.+.+..
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~~ 192 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFEN 192 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTTT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccccC
Confidence 67999999999999999999988776 89999999998775543
No 110
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.12 E-value=2.6e-09 Score=76.19 Aligned_cols=105 Identities=25% Similarity=0.294 Sum_probs=67.5
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCC-C--------C--------C-CCCCCHHHHHHHHHHH
Q 044507 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDA-P--------P--------D-VTSYTCFHVIGDLVGL 86 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~-~--------~--------~-~~~~~~~~~~~~l~~~ 86 (157)
|.||.+||.++....+.... .++..|+.++.+|.||.|.... . . + ....-......+....
T Consensus 84 Pavv~~hGyg~~~~~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ra 162 (320)
T PF05448_consen 84 PAVVQFHGYGGRSGDPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRA 162 (320)
T ss_dssp EEEEEE--TT--GGGHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHH
T ss_pred CEEEEecCCCCCCCCccccc-ccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHH
Confidence 78999999999877775554 4667899999999999983211 1 0 0 1112223344566666
Q ss_pred HHHhCC----CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 87 IDTVAP----NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 87 ~~~~~~----~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
++.+.. +.++|.+.|.|+||.+++.+++..+ +|++++...|.+.
T Consensus 163 vd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~ 210 (320)
T PF05448_consen 163 VDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLC 210 (320)
T ss_dssp HHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSS
T ss_pred HHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCcc
Confidence 665543 4679999999999999999999886 5988888877654
No 111
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.10 E-value=4.7e-09 Score=68.24 Aligned_cols=112 Identities=19% Similarity=0.330 Sum_probs=73.9
Q ss_pred EEEEeecC--CCCEEEEeCCCC-----CchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 044507 15 NMHIAEKG--QGPVILFLHGFP-----ELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLI 87 (157)
Q Consensus 15 ~~~~~~~~--~~p~vl~~hG~~-----~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~ 87 (157)
...|...+ ..|..|++|.-+ .+......++..|.++|+.++-+|+||.|.|...-+. .... ..|....+
T Consensus 17 e~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~-GiGE---~~Da~aal 92 (210)
T COG2945 17 EGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN-GIGE---LEDAAAAL 92 (210)
T ss_pred eeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC-Ccch---HHHHHHHH
Confidence 34444433 447888888542 3333456778899999999999999999999775432 2222 33444444
Q ss_pred HHhCC---CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 88 DTVAP---NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 88 ~~~~~---~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
++++. +..-.-+.|+|+|+.++..++.+.|+ +...+...|+.+
T Consensus 93 dW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~ 138 (210)
T COG2945 93 DWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPIN 138 (210)
T ss_pred HHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCC
Confidence 54443 22234689999999999999999876 445555555444
No 112
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.10 E-value=1.7e-09 Score=77.12 Aligned_cols=110 Identities=21% Similarity=0.190 Sum_probs=73.8
Q ss_pred CCCEEEEeCCCC---CchhhH-HHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEE
Q 044507 23 QGPVILFLHGFP---ELWYSW-RHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVF 98 (157)
Q Consensus 23 ~~p~vl~~hG~~---~~~~~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~ 98 (157)
+.|+||++||.+ ++.... ......+...|+.|+.+|+|-..+...+. ...+..+....+.+-...+..+.++|.
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~--~~~d~~~a~~~l~~~~~~~g~dp~~i~ 155 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPA--ALEDAYAAYRWLRANAAELGIDPSRIA 155 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCc--hHHHHHHHHHHHHhhhHhhCCCccceE
Confidence 358999999986 444444 45556666679999999998554443222 112222233334444443444689999
Q ss_pred EEEEcHHHHHHHHHHhcCcc----ceeEEEEeecccCCCC
Q 044507 99 VVGHDWGAFMAWFLCLFRPD----RVKALVNLSVVFNPFG 134 (157)
Q Consensus 99 l~G~S~Gg~~a~~~~~~~~~----~~~~~i~~~~~~~~~~ 134 (157)
+.|+|.||.+++.++..-.+ ...+.++++|..+...
T Consensus 156 v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 156 VAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred EEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 99999999999988886443 4678888888876553
No 113
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.09 E-value=5.8e-10 Score=81.24 Aligned_cols=110 Identities=22% Similarity=0.296 Sum_probs=61.3
Q ss_pred CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCC-CCC-----CCC----C-------C-----CCCC---C--
Q 044507 23 QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGF-GDT-----DAP----P-------D-----VTSY---T-- 75 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-g~s-----~~~----~-------~-----~~~~---~-- 75 (157)
+-|+|||-||.+++...|..+...|+++||.|+++|+|.. +.. +.. . + .... .
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 3489999999999999999999999999999999999843 110 000 0 0 0000 0
Q ss_pred ------HHHHHHHHHHHHHHhC---C---------------------CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEE
Q 044507 76 ------CFHVIGDLVGLIDTVA---P---------------------NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVN 125 (157)
Q Consensus 76 ------~~~~~~~l~~~~~~~~---~---------------------~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~ 125 (157)
++.-..++..+++.+. . +..++.++|||+||..++..+... .++++.|+
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~ 257 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEE
Confidence 0011122333332221 0 245899999999999999888776 56999999
Q ss_pred eecccCCC
Q 044507 126 LSVVFNPF 133 (157)
Q Consensus 126 ~~~~~~~~ 133 (157)
+++.+.|.
T Consensus 258 LD~W~~Pl 265 (379)
T PF03403_consen 258 LDPWMFPL 265 (379)
T ss_dssp ES---TTS
T ss_pred eCCcccCC
Confidence 99877643
No 114
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.07 E-value=5.7e-09 Score=66.06 Aligned_cols=116 Identities=22% Similarity=0.265 Sum_probs=84.1
Q ss_pred cCCCC-EEEEeCCCCCc--hhhHHHHHHHHHhCCCEEEecCCCCC-----CCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 044507 21 KGQGP-VILFLHGFPEL--WYSWRHQITALASLGYRAVAPDLRGF-----GDTDAPPDVTSYTCFHVIGDLVGLIDTVAP 92 (157)
Q Consensus 21 ~~~~p-~vl~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~-----g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~ 92 (157)
.++.| +||+-||.+.+ +......+..++.+|+.|.-++++.. |...+++. ...-...++..+.++...+
T Consensus 10 ag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~-~~t~~~~~~~~~aql~~~l-- 86 (213)
T COG3571 10 AGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPG-SGTLNPEYIVAIAQLRAGL-- 86 (213)
T ss_pred CCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCc-cccCCHHHHHHHHHHHhcc--
Confidence 34444 78889998764 44557778899999999999988643 32222222 3334455666777777766
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCCCCchHH
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPFGSINNV 139 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 139 (157)
...+.++-|+||||.++.+.+..-...|+++++++-++.+.....+.
T Consensus 87 ~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~~ 133 (213)
T COG3571 87 AEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQL 133 (213)
T ss_pred cCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcccc
Confidence 66799999999999999999988766799999999887766554433
No 115
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.06 E-value=2.4e-09 Score=88.86 Aligned_cols=103 Identities=14% Similarity=0.095 Sum_probs=85.4
Q ss_pred cCCCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEE
Q 044507 21 KGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVV 100 (157)
Q Consensus 21 ~~~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~ 100 (157)
.+++|+++++||.+++...|..+.+.|.+. +.|+.++.+|++.... ...++++.+.++.+.++.+. ...++.++
T Consensus 1065 ~~~~~~l~~lh~~~g~~~~~~~l~~~l~~~-~~v~~~~~~g~~~~~~----~~~~l~~la~~~~~~i~~~~-~~~p~~l~ 1138 (1296)
T PRK10252 1065 EGDGPTLFCFHPASGFAWQFSVLSRYLDPQ-WSIYGIQSPRPDGPMQ----TATSLDEVCEAHLATLLEQQ-PHGPYHLL 1138 (1296)
T ss_pred cCCCCCeEEecCCCCchHHHHHHHHhcCCC-CcEEEEECCCCCCCCC----CCCCHHHHHHHHHHHHHhhC-CCCCEEEE
Confidence 345689999999999999999999988765 9999999999986522 35788899999998888763 23589999
Q ss_pred EEcHHHHHHHHHHhc---CccceeEEEEeecc
Q 044507 101 GHDWGAFMAWFLCLF---RPDRVKALVNLSVV 129 (157)
Q Consensus 101 G~S~Gg~~a~~~~~~---~~~~~~~~i~~~~~ 129 (157)
|||+||.++.+++.+ .++++..++++++.
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 999999999999885 57788888888753
No 116
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.06 E-value=2e-09 Score=77.15 Aligned_cols=102 Identities=28% Similarity=0.505 Sum_probs=62.2
Q ss_pred CEEEEeCCCCCchhh--------------H----HHHHHHHHhCCCEEEecCCCCCCCCCCCCCCC---CCCHHHHHH--
Q 044507 25 PVILFLHGFPELWYS--------------W----RHQITALASLGYRAVAPDLRGFGDTDAPPDVT---SYTCFHVIG-- 81 (157)
Q Consensus 25 p~vl~~hG~~~~~~~--------------~----~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~---~~~~~~~~~-- 81 (157)
|.||.+||-++.... + ..+...|+++||.|+++|.+|+|+........ ..+....+.
T Consensus 116 PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~ 195 (390)
T PF12715_consen 116 PAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNL 195 (390)
T ss_dssp EEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHH
T ss_pred CEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHH
Confidence 789999997654321 1 23578999999999999999999875543211 122222222
Q ss_pred -------------HHHHHHHHhCC----CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEee
Q 044507 82 -------------DLVGLIDTVAP----NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLS 127 (157)
Q Consensus 82 -------------~l~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~ 127 (157)
+....++.+.. +.++|.++|+|+||..++.+++..+ +|++.+..+
T Consensus 196 l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~ 257 (390)
T PF12715_consen 196 LMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVANG 257 (390)
T ss_dssp HHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES
T ss_pred HHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhhhh
Confidence 23345555554 5689999999999999999999875 687766554
No 117
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.03 E-value=4.2e-09 Score=69.50 Aligned_cols=90 Identities=29% Similarity=0.403 Sum_probs=66.2
Q ss_pred EEEeCCCCCchhhHH--HHHHHHHhCC--CEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 044507 27 ILFLHGFPELWYSWR--HQITALASLG--YRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGH 102 (157)
Q Consensus 27 vl~~hG~~~~~~~~~--~~~~~l~~~g--~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~ 102 (157)
|+++||+.++..+.. .+.+.+.+.+ ..+.+++++ .........+.++++.. ..+.+.++|.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------~~p~~a~~~l~~~i~~~--~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------PFPEEAIAQLEQLIEEL--KPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------cCHHHHHHHHHHHHHhC--CCCCeEEEEE
Confidence 789999998877764 3456666654 455666653 34555677888888887 5556999999
Q ss_pred cHHHHHHHHHHhcCccceeEEEEeecccCCCC
Q 044507 103 DWGAFMAWFLCLFRPDRVKALVNLSVVFNPFG 134 (157)
Q Consensus 103 S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~ 134 (157)
|+||..|..++.+++ +.+ |++.|+..+..
T Consensus 67 SlGG~~A~~La~~~~--~~a-vLiNPav~p~~ 95 (187)
T PF05728_consen 67 SLGGFYATYLAERYG--LPA-VLINPAVRPYE 95 (187)
T ss_pred ChHHHHHHHHHHHhC--CCE-EEEcCCCCHHH
Confidence 999999999998885 334 88888776543
No 118
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.02 E-value=2.2e-09 Score=80.87 Aligned_cols=109 Identities=21% Similarity=0.264 Sum_probs=81.6
Q ss_pred CCCEEEEeCCCCCch---hhHHH----HHHHHHhCCCEEEecCCCCCCCCCC------CCCCCCCCHHHHHHHHHHHHHH
Q 044507 23 QGPVILFLHGFPELW---YSWRH----QITALASLGYRAVAPDLRGFGDTDA------PPDVTSYTCFHVIGDLVGLIDT 89 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~---~~~~~----~~~~l~~~g~~v~~~d~~g~g~s~~------~~~~~~~~~~~~~~~l~~~~~~ 89 (157)
+.|+++++-|.++-- ..|.. -...|++.||.|+++|.||...... ...+.....+++++.+.-+.++
T Consensus 641 kYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq 720 (867)
T KOG2281|consen 641 KYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQ 720 (867)
T ss_pred CCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHh
Confidence 348999999998532 12211 2467888999999999999654321 2344567777788777777776
Q ss_pred hC-CCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 90 VA-PNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 90 ~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
.. .+..+|.+.|||+||+++++.+.++|+-++..|+-+|..+
T Consensus 721 ~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~ 763 (867)
T KOG2281|consen 721 TGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTD 763 (867)
T ss_pred cCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCccee
Confidence 63 3789999999999999999999999998888877665443
No 119
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.01 E-value=2.1e-08 Score=71.68 Aligned_cols=111 Identities=18% Similarity=0.213 Sum_probs=75.9
Q ss_pred CCCEEEEeCCCC---C--chhhHHHHHHHHHh-CCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HhCC
Q 044507 23 QGPVILFLHGFP---E--LWYSWRHQITALAS-LGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLID----TVAP 92 (157)
Q Consensus 23 ~~p~vl~~hG~~---~--~~~~~~~~~~~l~~-~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~----~~~~ 92 (157)
..|.|||+||.| + +...|..+...+++ .+..|+.+|+|=-.+..-+ ...++....+.-+.+ ....
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~P-----a~y~D~~~Al~w~~~~~~~~~~~ 163 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFP-----AAYDDGWAALKWVLKNSWLKLGA 163 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCC-----ccchHHHHHHHHHHHhHHHHhCC
Confidence 348999999986 2 34556777777654 4899999999854444333 233333333333333 2333
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcC------ccceeEEEEeecccCCCCCchH
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFR------PDRVKALVNLSVVFNPFGSINN 138 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~------~~~~~~~i~~~~~~~~~~~~~~ 138 (157)
+.++++|.|.|.||.+|..++.+. +.++++.|++.|.+........
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~ 215 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTES 215 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCH
Confidence 788999999999999998877652 4579999999998876555443
No 120
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.01 E-value=2.5e-09 Score=72.07 Aligned_cols=100 Identities=17% Similarity=0.091 Sum_probs=80.3
Q ss_pred CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCCCCcEEEEE
Q 044507 23 QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDT-VAPNDEKVFVVG 101 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~i~l~G 101 (157)
.++.++.+|-.|++...|+++...+... +.++.+++||.+.....+ ...+++..++.+...+.. . ...+..++|
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~ep--~~~di~~Lad~la~el~~~~--~d~P~alfG 80 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFGEP--LLTDIESLADELANELLPPL--LDAPFALFG 80 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccccCCc--ccccHHHHHHHHHHHhcccc--CCCCeeecc
Confidence 4568999999999999999999888875 999999999999875544 567888888888888873 3 567999999
Q ss_pred EcHHHHHHHHHHhcCc---cceeEEEEee
Q 044507 102 HDWGAFMAWFLCLFRP---DRVKALVNLS 127 (157)
Q Consensus 102 ~S~Gg~~a~~~~~~~~---~~~~~~i~~~ 127 (157)
|||||++|.+.+.+.. ....++++.+
T Consensus 81 HSmGa~lAfEvArrl~~~g~~p~~lfisg 109 (244)
T COG3208 81 HSMGAMLAFEVARRLERAGLPPRALFISG 109 (244)
T ss_pred cchhHHHHHHHHHHHHHcCCCcceEEEec
Confidence 9999999999988632 2245555554
No 121
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=99.00 E-value=7.9e-09 Score=70.69 Aligned_cols=110 Identities=13% Similarity=0.130 Sum_probs=74.0
Q ss_pred CCCCEEEEeCCCCCchhhHHHHHHHHHh-CCC--EEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCCc
Q 044507 22 GQGPVILFLHGFPELWYSWRHQITALAS-LGY--RAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP--NDEK 96 (157)
Q Consensus 22 ~~~p~vl~~hG~~~~~~~~~~~~~~l~~-~g~--~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~ 96 (157)
.++..+||+||+..+...-...+..+.. .++ .++++.||+.|.-.... ....+.......+.++++.+.. +..+
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~-~d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYF-YDRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhh-hhhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 3567999999999886654333333332 223 79999999887632211 1222444456667777776654 4689
Q ss_pred EEEEEEcHHHHHHHHHHhc----Cc-----cceeEEEEeecccCC
Q 044507 97 VFVVGHDWGAFMAWFLCLF----RP-----DRVKALVNLSVVFNP 132 (157)
Q Consensus 97 i~l~G~S~Gg~~a~~~~~~----~~-----~~~~~~i~~~~~~~~ 132 (157)
|.+++||||+.+.+..+.. .+ .++..+++++|..+.
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 9999999999999877654 21 367899999877664
No 122
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.00 E-value=1.2e-09 Score=74.54 Aligned_cols=121 Identities=25% Similarity=0.380 Sum_probs=81.5
Q ss_pred EECCEEEEEe----e--cCCCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCC----C-C--------
Q 044507 10 KVNGINMHIA----E--KGQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAP----P-D-------- 70 (157)
Q Consensus 10 ~~~g~~~~~~----~--~~~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~----~-~-------- 70 (157)
..+|.+|.-+ . .+.-|.||-.||+++....|..+. .++..||.++..|.||.|.++.. . .
T Consensus 63 g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mt 141 (321)
T COG3458 63 GYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDML-HWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMT 141 (321)
T ss_pred ccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccc-cccccceeEEEEecccCCCccccCCCCCCCCcCCceeE
Confidence 3356666533 1 134489999999999888776655 34456899999999999887431 1 0
Q ss_pred ------CCCCCHHHHHHHHHHHHHHhCC----CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 71 ------VTSYTCFHVIGDLVGLIDTVAP----NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 71 ------~~~~~~~~~~~~l~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
...+-......|+..+++.+.. +.++|.+.|.|.||.+++..++..| +++++++.-|.+..
T Consensus 142 rGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~d 212 (321)
T COG3458 142 RGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSD 212 (321)
T ss_pred eecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccccccccc
Confidence 0011112233344444443332 6789999999999999999999887 68888888776653
No 123
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.99 E-value=6.7e-09 Score=75.72 Aligned_cols=130 Identities=23% Similarity=0.359 Sum_probs=93.5
Q ss_pred cceeEEEE-CCEEEEEe---ec-CCCCEEEEeCCCCCchhhH------HHHHHHHHhCCCEEEecCCCCCCCCCCCC---
Q 044507 4 IQHRIVKV-NGINMHIA---EK-GQGPVILFLHGFPELWYSW------RHQITALASLGYRAVAPDLRGFGDTDAPP--- 69 (157)
Q Consensus 4 ~~~~~~~~-~g~~~~~~---~~-~~~p~vl~~hG~~~~~~~~------~~~~~~l~~~g~~v~~~d~~g~g~s~~~~--- 69 (157)
.|.+.+.. ||+-+... .. +.+|+|++.||..+++..| ..++-.|+.+||.|+.-+.||...|....
T Consensus 48 ~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~ 127 (403)
T KOG2624|consen 48 VEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLS 127 (403)
T ss_pred eEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccC
Confidence 45555555 77644322 22 5669999999999888888 34566788999999999999976664422
Q ss_pred -----CCCCCCHHH-HHHHHHHHHHHhCC--CCCcEEEEEEcHHHHHHHHHHhcCcc---ceeEEEEeecccCCC
Q 044507 70 -----DVTSYTCFH-VIGDLVGLIDTVAP--NDEKVFVVGHDWGAFMAWFLCLFRPD---RVKALVNLSVVFNPF 133 (157)
Q Consensus 70 -----~~~~~~~~~-~~~~l~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~---~~~~~i~~~~~~~~~ 133 (157)
..-.++..+ ...||-+.++.+.. +.+++..+|||.|+.....++...|+ +|+.+++++|+....
T Consensus 128 ~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 128 PSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPK 202 (403)
T ss_pred CcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhc
Confidence 112344544 33466666666543 56899999999999998888887764 799999999887544
No 124
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.95 E-value=5.2e-08 Score=65.90 Aligned_cols=126 Identities=17% Similarity=0.217 Sum_probs=90.9
Q ss_pred ceeEEEECCEEEEEee-----c---CCCCEEEEeCCCCCchhhHHHHHHHHHhC-C--CEEEecCCCCCCCCC---C---
Q 044507 5 QHRIVKVNGINMHIAE-----K---GQGPVILFLHGFPELWYSWRHQITALASL-G--YRAVAPDLRGFGDTD---A--- 67 (157)
Q Consensus 5 ~~~~~~~~g~~~~~~~-----~---~~~p~vl~~hG~~~~~~~~~~~~~~l~~~-g--~~v~~~d~~g~g~s~---~--- 67 (157)
+++++...|..++... . .+++.+++++|.+|...-|.++++.|... + ..++.+...||-.-. .
T Consensus 2 ~e~~~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~ 81 (301)
T KOG3975|consen 2 TEKEYTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDH 81 (301)
T ss_pred cceeeeecCCcccceeeeeeeccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCccccccc
Confidence 4566666665544321 1 25678999999999999999998888765 1 458888877764322 1
Q ss_pred -CCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCcc--ceeEEEEeeccc
Q 044507 68 -PPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPD--RVKALVNLSVVF 130 (157)
Q Consensus 68 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~--~~~~~i~~~~~~ 130 (157)
......++++++++.-.++++.......+++++|||.|+++.++....... .+.+++++-|..
T Consensus 82 s~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 82 SHTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred ccccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 112356888899999999999887777999999999999999998885332 356666665543
No 125
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.95 E-value=2.4e-08 Score=78.55 Aligned_cols=126 Identities=17% Similarity=0.281 Sum_probs=90.7
Q ss_pred cceeEEEECCEEEEEee-------cC-CCCEEEEeCCCCCch-------hhHHHHHHHHHhCCCEEEecCCCCCCCCCCC
Q 044507 4 IQHRIVKVNGINMHIAE-------KG-QGPVILFLHGFPELW-------YSWRHQITALASLGYRAVAPDLRGFGDTDAP 68 (157)
Q Consensus 4 ~~~~~~~~~g~~~~~~~-------~~-~~p~vl~~hG~~~~~-------~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 68 (157)
.+...+.++|...++.. .+ +-|.++.+||.+++- ..|. ...+...|+.|+.+|.||.|.....
T Consensus 498 ~~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~--~~~~s~~g~~v~~vd~RGs~~~G~~ 575 (755)
T KOG2100|consen 498 VEFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWN--EVVVSSRGFAVLQVDGRGSGGYGWD 575 (755)
T ss_pred ceeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHH--HHhhccCCeEEEEEcCCCcCCcchh
Confidence 45566777888887652 11 237888899998631 2233 2256677999999999997655332
Q ss_pred ------CCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCc-cceeEEEEeecccC
Q 044507 69 ------PDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRP-DRVKALVNLSVVFN 131 (157)
Q Consensus 69 ------~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~-~~~~~~i~~~~~~~ 131 (157)
.+......++....+..+++....+.+++.+.|+|+||.+++.++...| +.+++.++++|..+
T Consensus 576 ~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd 645 (755)
T KOG2100|consen 576 FRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTD 645 (755)
T ss_pred HHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceee
Confidence 2233456666777777777766558899999999999999999999997 55677799888766
No 126
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.92 E-value=1.3e-07 Score=69.22 Aligned_cols=104 Identities=12% Similarity=0.131 Sum_probs=80.2
Q ss_pred CEEEEeCCCCCchhhH-HHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEc
Q 044507 25 PVILFLHGFPELWYSW-RHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHD 103 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S 103 (157)
|+||++....+..... +++++.|.+ |+.|+..|+..-+..+. .....++++.++.+.++++.+ +.+ ++++|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~--~~~~f~ldDYi~~l~~~i~~~--G~~-v~l~GvC 176 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPL--SAGKFDLEDYIDYLIEFIRFL--GPD-IHVIAVC 176 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCch--hcCCCCHHHHHHHHHHHHHHh--CCC-CcEEEEc
Confidence 6899998887654433 778888888 99999999864333221 225788999998899999888 545 9999999
Q ss_pred HHHHHHHHHHhc-----CccceeEEEEeecccCCCC
Q 044507 104 WGAFMAWFLCLF-----RPDRVKALVNLSVVFNPFG 134 (157)
Q Consensus 104 ~Gg~~a~~~~~~-----~~~~~~~~i~~~~~~~~~~ 134 (157)
+||..++.+++. .|.+++.+++++++.+...
T Consensus 177 qgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 177 QPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred hhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 999987655554 3667999999999988654
No 127
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.91 E-value=9.4e-08 Score=64.62 Aligned_cols=120 Identities=16% Similarity=0.209 Sum_probs=76.1
Q ss_pred eeEEEE-CCEEEEEeecC-------CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCC-CCCCCCCCCCCCCH
Q 044507 6 HRIVKV-NGINMHIAEKG-------QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGF-GDTDAPPDVTSYTC 76 (157)
Q Consensus 6 ~~~~~~-~g~~~~~~~~~-------~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-g~s~~~~~~~~~~~ 76 (157)
.+.+.+ +|.+|+.+... ..++||+.+|++..-..+..++.+|+..||.|+-+|...| |.|+... ..+++
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I--~eftm 81 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI--NEFTM 81 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------H
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh--hhcch
Confidence 456666 67889887533 3479999999999999999999999999999999998755 7787765 56788
Q ss_pred HHHHHHHHHHHHHhCC-CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecc
Q 044507 77 FHVIGDLVGLIDTVAP-NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVV 129 (157)
Q Consensus 77 ~~~~~~l~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~ 129 (157)
.....++..+++++.. +..++.+++-|..|.+|...+.+- .+.-+|+.-+.
T Consensus 82 s~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGV 133 (294)
T PF02273_consen 82 SIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGV 133 (294)
T ss_dssp HHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--
T ss_pred HHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeee
Confidence 8888888888888764 678999999999999999998854 35555554333
No 128
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.91 E-value=8.3e-09 Score=69.90 Aligned_cols=87 Identities=15% Similarity=0.188 Sum_probs=50.5
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhC--CCEEEecCCCCCCCCCCCCCCCCCCHHH----HHHHHHHHHHHhCCCCCcEE
Q 044507 25 PVILFLHGFPELWYSWRHQITALASL--GYRAVAPDLRGFGDTDAPPDVTSYTCFH----VIGDLVGLIDTVAPNDEKVF 98 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~--g~~v~~~d~~g~g~s~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~i~ 98 (157)
-.||++||+.|+..+|..+.+.+... .+.-..+...++..+... ...+++. .++++.+.++.......+|+
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~---T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK---TFDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc---cchhhHHHHHHHHHHHHHhccccccccccce
Confidence 37999999999999998887777762 121111111111111111 1122333 34444444444422336899
Q ss_pred EEEEcHHHHHHHHHHh
Q 044507 99 VVGHDWGAFMAWFLCL 114 (157)
Q Consensus 99 l~G~S~Gg~~a~~~~~ 114 (157)
++|||+||.++..+..
T Consensus 82 fIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 82 FIGHSLGGLIARYALG 97 (217)
T ss_pred EEEecccHHHHHHHHH
Confidence 9999999999876655
No 129
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.90 E-value=6.9e-08 Score=67.64 Aligned_cols=107 Identities=14% Similarity=0.130 Sum_probs=66.6
Q ss_pred CEEEEeCCCCC---chhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC------CCC
Q 044507 25 PVILFLHGFPE---LWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP------NDE 95 (157)
Q Consensus 25 p~vl~~hG~~~---~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~ 95 (157)
-.||||.|.+. +......+++.|.+.++.++.+.++...... ...++++.++++.+.++++.. ..+
T Consensus 34 ~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~-----G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~ 108 (303)
T PF08538_consen 34 NALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGW-----GTSSLDRDVEEIAQLVEYLRSEKGGHFGRE 108 (303)
T ss_dssp SEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS------S--HHHHHHHHHHHHHHHHHHS------S
T ss_pred cEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCc-----CcchhhhHHHHHHHHHHHHHHhhccccCCc
Confidence 38999999874 3344577888888889999999876321111 233566677777777776543 357
Q ss_pred cEEEEEEcHHHHHHHHHHhcCc-----cceeEEEEeecccCCCCCc
Q 044507 96 KVFVVGHDWGAFMAWFLCLFRP-----DRVKALVNLSVVFNPFGSI 136 (157)
Q Consensus 96 ~i~l~G~S~Gg~~a~~~~~~~~-----~~~~~~i~~~~~~~~~~~~ 136 (157)
+|+|+|||.|+.-+++++.... ..++++|+-+|..+.+...
T Consensus 109 kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~ 154 (303)
T PF08538_consen 109 KIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAIL 154 (303)
T ss_dssp -EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTT
T ss_pred cEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhh
Confidence 9999999999999999988753 5699999999988865443
No 130
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.88 E-value=1.8e-08 Score=65.88 Aligned_cols=99 Identities=23% Similarity=0.195 Sum_probs=78.5
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCCcEEEEEEc
Q 044507 26 VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP--NDEKVFVVGHD 103 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~l~G~S 103 (157)
.+|++.|=+|...--..+++.|+++|+.|+.+|-+-|-.+ ..+.++.+.++..+++.... +.+++.|+|+|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~-------~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWS-------ERTPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhh-------hCCHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 5788888888765567889999999999999997765544 34567778888888887654 67899999999
Q ss_pred HHHHHHHHHHhcCc----cceeEEEEeecccC
Q 044507 104 WGAFMAWFLCLFRP----DRVKALVNLSVVFN 131 (157)
Q Consensus 104 ~Gg~~a~~~~~~~~----~~~~~~i~~~~~~~ 131 (157)
+|+-+.-...-+.| +++..++++++...
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 99987776666655 46889999987655
No 131
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.85 E-value=1.9e-08 Score=74.09 Aligned_cols=121 Identities=17% Similarity=0.124 Sum_probs=78.5
Q ss_pred CCEEEEEeecC----CCCEEEEeCCCC---CchhhHHHHHHHHHhCC-CEEEecCCCC--CCCCC----C--C---CCCC
Q 044507 12 NGINMHIAEKG----QGPVILFLHGFP---ELWYSWRHQITALASLG-YRAVAPDLRG--FGDTD----A--P---PDVT 72 (157)
Q Consensus 12 ~g~~~~~~~~~----~~p~vl~~hG~~---~~~~~~~~~~~~l~~~g-~~v~~~d~~g--~g~s~----~--~---~~~~ 72 (157)
|-.-+.++.+. +.|++|+|||.+ |+.....---..|+++| +.+|.+|+|= .|.-. . . .+..
T Consensus 78 DCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~G 157 (491)
T COG2272 78 DCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLG 157 (491)
T ss_pred cceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhcccccccccccc
Confidence 34445555433 349999999975 33333211234677777 9999999982 12111 1 1 1112
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhc--CccceeEEEEeecccCC
Q 044507 73 SYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLF--RPDRVKALVNLSVVFNP 132 (157)
Q Consensus 73 ~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~--~~~~~~~~i~~~~~~~~ 132 (157)
..+..-..+++.+-|.....++++|.|+|+|.|++.++.+++. ....++++|+.++....
T Consensus 158 l~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~~ 219 (491)
T COG2272 158 LLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAASR 219 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCCc
Confidence 2334445567778888888789999999999999988877664 23457888888887763
No 132
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.84 E-value=6.2e-09 Score=68.73 Aligned_cols=125 Identities=26% Similarity=0.441 Sum_probs=83.4
Q ss_pred CCEEEEeCCCCCchhhHH---HHHHHHHhCCCEEEecCC--CCC---CCCCCC---------------CCCCCCCHHH-H
Q 044507 24 GPVILFLHGFPELWYSWR---HQITALASLGYRAVAPDL--RGF---GDTDAP---------------PDVTSYTCFH-V 79 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~---~~~~~l~~~g~~v~~~d~--~g~---g~s~~~---------------~~~~~~~~~~-~ 79 (157)
-|+++++.|..++.+++. .+.....++|..||.||- ||. |+.+-. +....+.+-+ .
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 389999999999988883 345667778999999985 443 111100 0001122222 3
Q ss_pred HHHHHHHHHHh--CCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCCCCchHHHHHHHhhcCC
Q 044507 80 IGDLVGLIDTV--APNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPFGSINNVIEALRAYYGD 149 (157)
Q Consensus 80 ~~~l~~~~~~~--~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (157)
.+++.+++... ..+..++.+.||||||.-|+-.+.++|.+.+.+-.++|..+|....+-. +.|..++++
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpWGq-KAf~gYLG~ 194 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPWGQ-KAFTGYLGD 194 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcchH-HHhhcccCC
Confidence 33455555421 1156789999999999999999999999999999999988876655443 455555544
No 133
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.84 E-value=7.1e-09 Score=71.58 Aligned_cols=54 Identities=24% Similarity=0.487 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhCC-CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 79 VIGDLVGLIDTVAP-NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 79 ~~~~l~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
..++|...++.... ...+..+.|+||||..|+.++.++|+.+.++++++|...+
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 44577777776554 2233999999999999999999999999999999987554
No 134
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.83 E-value=2.2e-08 Score=72.08 Aligned_cols=101 Identities=20% Similarity=0.239 Sum_probs=77.9
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCCCE---EEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 044507 26 VILFLHGFPELWYSWRHQITALASLGYR---AVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGH 102 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g~~---v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~ 102 (157)
+++++||.+.....+.++...+...|+. +..++.++. ....+ .....++....+++.+... ..+++.++||
T Consensus 61 pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~---~~~~~~ql~~~V~~~l~~~--ga~~v~LigH 134 (336)
T COG1075 61 PIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-DGTYS---LAVRGEQLFAYVDEVLAKT--GAKKVNLIGH 134 (336)
T ss_pred eEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-CCCcc---ccccHHHHHHHHHHHHhhc--CCCceEEEee
Confidence 9999999988888998888888877777 777777655 11111 2344555566666666655 5689999999
Q ss_pred cHHHHHHHHHHhcCc--cceeEEEEeecccCC
Q 044507 103 DWGAFMAWFLCLFRP--DRVKALVNLSVVFNP 132 (157)
Q Consensus 103 S~Gg~~a~~~~~~~~--~~~~~~i~~~~~~~~ 132 (157)
|+||..+..++...+ .+++.++.++++-..
T Consensus 135 S~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 135 SMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred cccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 999999998888887 789999999987663
No 135
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.82 E-value=2.5e-08 Score=69.06 Aligned_cols=104 Identities=23% Similarity=0.285 Sum_probs=62.7
Q ss_pred CEEEEeCCCCCchhhHHHH--------HHHHHhCCCEEEecCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHH-HHhCCCC
Q 044507 25 PVILFLHGFPELWYSWRHQ--------ITALASLGYRAVAPDLRG-FGDTDAPPDVTSYTCFHVIGDLVGLI-DTVAPND 94 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~--------~~~l~~~g~~v~~~d~~g-~g~s~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~ 94 (157)
|.|||+||.+....+-... +....+.++-|++|.+-- +-.++.. ...-....++-+.+.+ ++...+.
T Consensus 192 PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~---t~~~l~~~idli~~vlas~ynID~ 268 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEK---TLLYLIEKIDLILEVLASTYNIDR 268 (387)
T ss_pred cEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccc---cchhHHHHHHHHHHHHhhccCccc
Confidence 8999999998654443221 122223344555555321 1111110 1111222233333222 2222378
Q ss_pred CcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 95 EKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 95 ~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
++|.++|.|+||..++.++.++|+.+++.+++++.-+
T Consensus 269 sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 269 SRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred ceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 9999999999999999999999999999999987654
No 136
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.81 E-value=3e-08 Score=74.88 Aligned_cols=108 Identities=17% Similarity=0.082 Sum_probs=69.5
Q ss_pred CCCEEEEeCCCC---CchhhHHHHHHHHHhC--CCEEEecCCC-C---CCCCCCCC---CCCCCCHHHHHHHHHHHHHHh
Q 044507 23 QGPVILFLHGFP---ELWYSWRHQITALASL--GYRAVAPDLR-G---FGDTDAPP---DVTSYTCFHVIGDLVGLIDTV 90 (157)
Q Consensus 23 ~~p~vl~~hG~~---~~~~~~~~~~~~l~~~--g~~v~~~d~~-g---~g~s~~~~---~~~~~~~~~~~~~l~~~~~~~ 90 (157)
+.|++|++||.+ ++...+ ....+... ++.|+.+++| | +....... +....+.....+.+.+.++..
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 348999999975 222222 12334433 3899999998 3 22222111 112334444555666666666
Q ss_pred CCCCCcEEEEEEcHHHHHHHHHHhc--CccceeEEEEeecccCC
Q 044507 91 APNDEKVFVVGHDWGAFMAWFLCLF--RPDRVKALVNLSVVFNP 132 (157)
Q Consensus 91 ~~~~~~i~l~G~S~Gg~~a~~~~~~--~~~~~~~~i~~~~~~~~ 132 (157)
..++++|.++|+|.||..+..++.. .+..++++|+.++....
T Consensus 172 ggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 172 GGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred CCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 6678999999999999998887775 34568888988876553
No 137
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.81 E-value=1.1e-07 Score=70.26 Aligned_cols=105 Identities=19% Similarity=0.290 Sum_probs=68.8
Q ss_pred CCEEEEeCCCCC-chhhHHHHHHHHHhCC----CEEEecCCCCCC-CCCCCCCCCCCC-HHHHHHHHHHHHHHhCC---C
Q 044507 24 GPVILFLHGFPE-LWYSWRHQITALASLG----YRAVAPDLRGFG-DTDAPPDVTSYT-CFHVIGDLVGLIDTVAP---N 93 (157)
Q Consensus 24 ~p~vl~~hG~~~-~~~~~~~~~~~l~~~g----~~v~~~d~~g~g-~s~~~~~~~~~~-~~~~~~~l~~~~~~~~~---~ 93 (157)
.|+|+++||..- ........++.+...| ..+|.+|..... .+.... .... .....+++...++.... +
T Consensus 209 ~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~--~~~~f~~~l~~eLlP~I~~~y~~~~d 286 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELP--CNADFWLAVQQELLPQVRAIAPFSDD 286 (411)
T ss_pred CCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCC--chHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 488999998542 1122344566666665 356777753211 111111 1111 22245677777776532 5
Q ss_pred CCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeeccc
Q 044507 94 DEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 94 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
.++..|.|+||||..++.++.++|+++.+++.+++.+
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 6789999999999999999999999999999999875
No 138
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.77 E-value=3.1e-07 Score=68.80 Aligned_cols=129 Identities=15% Similarity=0.128 Sum_probs=83.8
Q ss_pred eeEEEEC----CEEEEEee------cCCCCEEEEeCCCCCchhhHHHHH------------------HHHHhCCCEEEec
Q 044507 6 HRIVKVN----GINMHIAE------KGQGPVILFLHGFPELWYSWRHQI------------------TALASLGYRAVAP 57 (157)
Q Consensus 6 ~~~~~~~----g~~~~~~~------~~~~p~vl~~hG~~~~~~~~~~~~------------------~~l~~~g~~v~~~ 57 (157)
+.+++++ +..++|+- +.+.|++|+++|.+|.+..+.-+. ..+.+. ..++.+
T Consensus 49 sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~i 127 (462)
T PTZ00472 49 SGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYV 127 (462)
T ss_pred eEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEE
Confidence 4556663 35677662 225699999999988765442211 012233 688888
Q ss_pred CC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-----CCCcEEEEEEcHHHHHHHHHHhcC----------cccee
Q 044507 58 DL-RGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP-----NDEKVFVVGHDWGAFMAWFLCLFR----------PDRVK 121 (157)
Q Consensus 58 d~-~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~~~~~----------~~~~~ 121 (157)
|. .|+|.|.........+.++.++++.++++.... ...+++|+|+|+||..+..++..- +-.++
T Consensus 128 DqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLk 207 (462)
T PTZ00472 128 DQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLA 207 (462)
T ss_pred eCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeE
Confidence 86 488887654322345566778888877775421 458999999999999887776651 12367
Q ss_pred EEEEeecccCCCCC
Q 044507 122 ALVNLSVVFNPFGS 135 (157)
Q Consensus 122 ~~i~~~~~~~~~~~ 135 (157)
++++-.+..++...
T Consensus 208 Gi~IGNg~~dp~~q 221 (462)
T PTZ00472 208 GLAVGNGLTDPYTQ 221 (462)
T ss_pred EEEEeccccChhhh
Confidence 88887777665443
No 139
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.77 E-value=3.4e-08 Score=68.87 Aligned_cols=109 Identities=17% Similarity=0.252 Sum_probs=72.5
Q ss_pred CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCC------C----C------------CCCC--CC---CH
Q 044507 24 GPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTD------A----P------------PDVT--SY---TC 76 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~------~----~------------~~~~--~~---~~ 76 (157)
-|+|||-||.+++..-|..+.-.|+++||.|.++++|-..-.. . + .+.. .. .+
T Consensus 118 ~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeqv 197 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQV 197 (399)
T ss_pred ccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHHH
Confidence 4999999999999999999999999999999999998643220 0 0 0000 00 11
Q ss_pred HHHHHHHH---HHHHHhCC----------------------CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 77 FHVIGDLV---GLIDTVAP----------------------NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 77 ~~~~~~l~---~~~~~~~~----------------------~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
.+-+.++. .+++.+.. +..++.++|||+||..++..+..+. .+++.|++++.+-
T Consensus 198 ~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~WM~ 276 (399)
T KOG3847|consen 198 GQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAWMF 276 (399)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeeeec
Confidence 11122222 22222211 2357899999999999988888765 4888888877665
Q ss_pred CC
Q 044507 132 PF 133 (157)
Q Consensus 132 ~~ 133 (157)
|-
T Consensus 277 Pl 278 (399)
T KOG3847|consen 277 PL 278 (399)
T ss_pred cc
Confidence 43
No 140
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.76 E-value=4.8e-08 Score=70.42 Aligned_cols=107 Identities=17% Similarity=0.162 Sum_probs=81.5
Q ss_pred CEEEEeCCCCCchhhHH---HHH-HHHHhCCCEEEecCCCCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHhCC
Q 044507 25 PVILFLHGFPELWYSWR---HQI-TALASLGYRAVAPDLRGFGDTDAPPD--------VTSYTCFHVIGDLVGLIDTVAP 92 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~---~~~-~~l~~~g~~v~~~d~~g~g~s~~~~~--------~~~~~~~~~~~~l~~~~~~~~~ 92 (157)
-||+|..|..|+.+.+. .+. +...+.+..+|.+++|-+|+|-+-.. ..-.+.++...|...++..++.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 58899999998876663 233 44445588999999999999865321 1235667777888888888765
Q ss_pred ----CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 93 ----NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 93 ----~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
...+++++|-|+||+++..+-.+||+.+.+.++-++|..
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 346899999999999999999999998887777666554
No 141
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.74 E-value=1.6e-07 Score=66.41 Aligned_cols=107 Identities=15% Similarity=0.208 Sum_probs=72.0
Q ss_pred ceeEEEECCEEEE-----EeecCCCCEEEEeCCCCCchhhH-------HHHHHHHHhCCCEEEecCCCCCCCCCCCCCCC
Q 044507 5 QHRIVKVNGINMH-----IAEKGQGPVILFLHGFPELWYSW-------RHQITALASLGYRAVAPDLRGFGDTDAPPDVT 72 (157)
Q Consensus 5 ~~~~~~~~g~~~~-----~~~~~~~p~vl~~hG~~~~~~~~-------~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~ 72 (157)
+...+..|++.+- .....+...+|+.-|.++.-+.. ..+.+...+.+.+|+.+++||.|.|....
T Consensus 113 kRv~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~--- 189 (365)
T PF05677_consen 113 KRVPIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP--- 189 (365)
T ss_pred eeEEEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC---
Confidence 3444555666543 22333445899998988665541 23444444558999999999999997654
Q ss_pred CCCHHHHHHHHHHHHHHhCC-----CCCcEEEEEEcHHHHHHHHHHhcC
Q 044507 73 SYTCFHVIGDLVGLIDTVAP-----NDEKVFVVGHDWGAFMAWFLCLFR 116 (157)
Q Consensus 73 ~~~~~~~~~~l~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~~~~~ 116 (157)
+.++.+.+....++.+.. +.++|.+.|||.||.++...+.+.
T Consensus 190 --s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 190 --SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred --CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 345566665555555542 458999999999999998876654
No 142
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.71 E-value=1.8e-07 Score=63.44 Aligned_cols=106 Identities=20% Similarity=0.179 Sum_probs=74.4
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCC-----CEEEecCCCCC----CCCCCCC---------CCCCCCHHHHHHHHHHHH
Q 044507 26 VILFLHGFPELWYSWRHQITALASLG-----YRAVAPDLRGF----GDTDAPP---------DVTSYTCFHVIGDLVGLI 87 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g-----~~v~~~d~~g~----g~s~~~~---------~~~~~~~~~~~~~l~~~~ 87 (157)
|.||+||.+|+..+...+++.+.+.+ --++.+|..|. |.-+... ..-..+..++..++..++
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~m 126 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAM 126 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHH
Confidence 89999999999999999999998774 24555565552 2111110 001233444555666666
Q ss_pred HHhCC--CCCcEEEEEEcHHHHHHHHHHhcCcc-----ceeEEEEeecccC
Q 044507 88 DTVAP--NDEKVFVVGHDWGAFMAWFLCLFRPD-----RVKALVNLSVVFN 131 (157)
Q Consensus 88 ~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~-----~~~~~i~~~~~~~ 131 (157)
..++. +..++.++||||||.....++..+.. .+..+|.++++++
T Consensus 127 syL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 127 SYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 65544 67899999999999999999887542 4889999998887
No 143
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.70 E-value=6.4e-08 Score=74.66 Aligned_cols=103 Identities=17% Similarity=0.224 Sum_probs=65.2
Q ss_pred CCEEEEeCCCCCchhhHHHHHHHHHh----------------CCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 044507 24 GPVILFLHGFPELWYSWRHQITALAS----------------LGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLI 87 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~~~~~~l~~----------------~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~ 87 (157)
+-||+|++|..|+..+-+.++..... ..+..+++|.- .+-.-.....+.++++.+.+.|
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFn-----Ee~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFN-----EEFTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEccc-----chhhhhccHhHHHHHHHHHHHH
Confidence 45999999999998888887665552 12444444442 1111122344555555555554
Q ss_pred HHhC---CC--------CCcEEEEEEcHHHHHHHHHHhc---CccceeEEEEeecccC
Q 044507 88 DTVA---PN--------DEKVFVVGHDWGAFMAWFLCLF---RPDRVKALVNLSVVFN 131 (157)
Q Consensus 88 ~~~~---~~--------~~~i~l~G~S~Gg~~a~~~~~~---~~~~~~~~i~~~~~~~ 131 (157)
+.+. .+ +..|+++||||||.+|..++.. .++.+..++..++|..
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 4322 11 4569999999999998877664 3456778888877655
No 144
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.70 E-value=1.4e-07 Score=67.43 Aligned_cols=94 Identities=27% Similarity=0.336 Sum_probs=63.2
Q ss_pred CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCC--CCCCCCC-CCCCCCHH---H---HHHHHHHHHHHh----
Q 044507 24 GPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGF--GDTDAPP-DVTSYTCF---H---VIGDLVGLIDTV---- 90 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~--g~s~~~~-~~~~~~~~---~---~~~~l~~~~~~~---- 90 (157)
.|.|++-||.++...++..+++.+++.||.|..++++|. |...... ....+... + .+..+.+.+.++
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP 150 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASP 150 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCc
Confidence 489999999999999999999999999999999999984 3222111 00001111 1 111222222222
Q ss_pred --CC--CCCcEEEEEEcHHHHHHHHHHhcCc
Q 044507 91 --AP--NDEKVFVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 91 --~~--~~~~i~l~G~S~Gg~~a~~~~~~~~ 117 (157)
+. +..+|.++|||+||..++..+....
T Consensus 151 ~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 151 ALAGRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred ccccccCccceEEEecccccHHHHHhccccc
Confidence 11 4579999999999999998877543
No 145
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.69 E-value=9e-08 Score=64.18 Aligned_cols=104 Identities=18% Similarity=0.308 Sum_probs=70.5
Q ss_pred ECCEEEEEe---ecCCCCEEEEeCCCC-CchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCC-CCCCCCHHHHHH-HHH
Q 044507 11 VNGINMHIA---EKGQGPVILFLHGFP-ELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPP-DVTSYTCFHVIG-DLV 84 (157)
Q Consensus 11 ~~g~~~~~~---~~~~~p~vl~~hG~~-~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~-~l~ 84 (157)
-||+.+.-+ ..++.+-.+++.|.. -...-|+.++..+++.||.|...|+||.|.|.+.. ........+++. |+.
T Consensus 13 ~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~ 92 (281)
T COG4757 13 PDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFP 92 (281)
T ss_pred CCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchH
Confidence 377776543 333445455555544 44456788999999999999999999999997754 112344444433 566
Q ss_pred HHHHHhCC--CCCcEEEEEEcHHHHHHHHHHh
Q 044507 85 GLIDTVAP--NDEKVFVVGHDWGAFMAWFLCL 114 (157)
Q Consensus 85 ~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~ 114 (157)
..++.++. ...+...+|||+||.+...+..
T Consensus 93 aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 93 AALAALKKALPGHPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred HHHHHHHhhCCCCceEEeeccccceeeccccc
Confidence 66666554 5679999999999987655443
No 146
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.69 E-value=2.6e-07 Score=73.08 Aligned_cols=86 Identities=13% Similarity=0.155 Sum_probs=67.6
Q ss_pred HHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC------------------CCCcEEEEEEc
Q 044507 42 HQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP------------------NDEKVFVVGHD 103 (157)
Q Consensus 42 ~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~------------------~~~~i~l~G~S 103 (157)
.+.+.+.++||.|+..|.||.|.|...... -..+...+..+.|+++.. ...+|.++|.|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~---~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~S 346 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT---GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKS 346 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc---CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEc
Confidence 345788999999999999999999875321 113455666667776641 24799999999
Q ss_pred HHHHHHHHHHhcCccceeEEEEeeccc
Q 044507 104 WGAFMAWFLCLFRPDRVKALVNLSVVF 130 (157)
Q Consensus 104 ~Gg~~a~~~~~~~~~~~~~~i~~~~~~ 130 (157)
+||.+++..|...|..++++|..++..
T Consensus 347 Y~G~~~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 347 YLGTLPNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHHHHHHHhhCCCcceEEEeeCCCC
Confidence 999999999999888999999987654
No 147
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.69 E-value=4e-07 Score=58.60 Aligned_cols=92 Identities=14% Similarity=0.079 Sum_probs=65.4
Q ss_pred CEEEEeCCCCCch-hhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEc
Q 044507 25 PVILFLHGFPELW-YSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHD 103 (157)
Q Consensus 25 p~vl~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S 103 (157)
+.+|++||+.++. ..|.... ..+--++-.+++ .+......+++++.+.+.+... .+++++|+||
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~w---e~~l~~a~rveq---------~~w~~P~~~dWi~~l~~~v~a~---~~~~vlVAHS 67 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRW---ESALPNARRVEQ---------DDWEAPVLDDWIARLEKEVNAA---EGPVVLVAHS 67 (181)
T ss_pred ceEEEecCCCCCChhHHHHHH---HhhCccchhccc---------CCCCCCCHHHHHHHHHHHHhcc---CCCeEEEEec
Confidence 5689999998765 3454332 222111222222 1225667888888888888776 4569999999
Q ss_pred HHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 104 WGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 104 ~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
.|+..++.++......++++++++|+-.
T Consensus 68 LGc~~v~h~~~~~~~~V~GalLVAppd~ 95 (181)
T COG3545 68 LGCATVAHWAEHIQRQVAGALLVAPPDV 95 (181)
T ss_pred ccHHHHHHHHHhhhhccceEEEecCCCc
Confidence 9999999999988779999999988764
No 148
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.68 E-value=6.4e-08 Score=73.61 Aligned_cols=107 Identities=17% Similarity=0.072 Sum_probs=64.5
Q ss_pred CCEEEEeCCCC---Cch--hhHHHHHHHHHhCCCEEEecCCC----CCCCCCCC----CCCCCCCHHHHHHHHHHHHHHh
Q 044507 24 GPVILFLHGFP---ELW--YSWRHQITALASLGYRAVAPDLR----GFGDTDAP----PDVTSYTCFHVIGDLVGLIDTV 90 (157)
Q Consensus 24 ~p~vl~~hG~~---~~~--~~~~~~~~~l~~~g~~v~~~d~~----g~g~s~~~----~~~~~~~~~~~~~~l~~~~~~~ 90 (157)
.|++|+|||.+ |+. ..+ .-...+.++++.||.+++| |+-..... .+....+.....+++.+-|...
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~-~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPY-DGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGG-HTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGG
T ss_pred cceEEEeecccccCCCcccccc-cccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhc
Confidence 48999999975 333 233 2334556678999999998 33222111 1112234444555666777777
Q ss_pred CCCCCcEEEEEEcHHHHHHHHHHhc--CccceeEEEEeecccC
Q 044507 91 APNDEKVFVVGHDWGAFMAWFLCLF--RPDRVKALVNLSVVFN 131 (157)
Q Consensus 91 ~~~~~~i~l~G~S~Gg~~a~~~~~~--~~~~~~~~i~~~~~~~ 131 (157)
..++++|.|+|+|.||..+...+.. ....++++|+.++...
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred ccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 6678999999999999888766665 2346999999988433
No 149
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.67 E-value=5.6e-08 Score=64.06 Aligned_cols=101 Identities=19% Similarity=0.200 Sum_probs=68.9
Q ss_pred CCCEEEEeCCCC---CchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCCc
Q 044507 23 QGPVILFLHGFP---ELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTV---APNDEK 96 (157)
Q Consensus 23 ~~p~vl~~hG~~---~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~ 96 (157)
..|.+||+||.. ++.......+..+.++||+|..+++ +.+. ...++++.+.+....++.+ ....++
T Consensus 66 ~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~-----q~htL~qt~~~~~~gv~filk~~~n~k~ 137 (270)
T KOG4627|consen 66 QAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCP-----QVHTLEQTMTQFTHGVNFILKYTENTKV 137 (270)
T ss_pred CccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCc-----ccccHHHHHHHHHHHHHHHHHhccccee
Confidence 357999999874 4444455667778888999998875 2222 2234444444444333332 224577
Q ss_pred EEEEEEcHHHHHHHHHHhc-CccceeEEEEeecccC
Q 044507 97 VFVVGHDWGAFMAWFLCLF-RPDRVKALVNLSVVFN 131 (157)
Q Consensus 97 i~l~G~S~Gg~~a~~~~~~-~~~~~~~~i~~~~~~~ 131 (157)
+.+.|||.|+.++.....+ +..+|.+++++++.+.
T Consensus 138 l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~ 173 (270)
T KOG4627|consen 138 LTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD 173 (270)
T ss_pred EEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh
Confidence 9999999999999888776 4457999999988766
No 150
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.64 E-value=1.7e-07 Score=70.60 Aligned_cols=121 Identities=20% Similarity=0.245 Sum_probs=82.1
Q ss_pred EEECCEEEEEe---ec--CCCCEEEEeC--CCCCc---hhhHHHHHH---HHHhCCCEEEecCCCCCCCCCCCCCCCCCC
Q 044507 9 VKVNGINMHIA---EK--GQGPVILFLH--GFPEL---WYSWRHQIT---ALASLGYRAVAPDLRGFGDTDAPPDVTSYT 75 (157)
Q Consensus 9 ~~~~g~~~~~~---~~--~~~p~vl~~h--G~~~~---~~~~~~~~~---~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~ 75 (157)
..-||++|+.. .. +..|+++..+ -+.-. ...-..... .++.+||.||..|.||.|.|...-.....
T Consensus 25 ~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~- 103 (563)
T COG2936 25 PMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESS- 103 (563)
T ss_pred EecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceecc-
Confidence 33389888754 33 3447888888 33222 111111222 57788999999999999999876432211
Q ss_pred HHHHHHHHHHHHHHhC---CCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 76 CFHVIGDLVGLIDTVA---PNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 76 ~~~~~~~l~~~~~~~~---~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
+.+.|-.+.|+.+. ....+|..+|-|++|...+..|+..|..+++++..++..+.
T Consensus 104 --~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 104 --REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred --ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 23334444444433 25689999999999999999999999999999988887763
No 151
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.64 E-value=6.2e-08 Score=64.52 Aligned_cols=124 Identities=20% Similarity=0.271 Sum_probs=83.3
Q ss_pred eEEEECCEEEEEeecCCCC-EEEEeCCCCC-chhhHHHHHHHHHhCCCEEEecCCC-CCCCCCC------CCCCCCCCHH
Q 044507 7 RIVKVNGINMHIAEKGQGP-VILFLHGFPE-LWYSWRHQITALASLGYRAVAPDLR-GFGDTDA------PPDVTSYTCF 77 (157)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~p-~vl~~hG~~~-~~~~~~~~~~~l~~~g~~v~~~d~~-g~g~s~~------~~~~~~~~~~ 77 (157)
+..+++|...+.....+.+ .||.+..+-| ...+-+..++.++..||.|++||+. |-..+.. +......+..
T Consensus 21 ~~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~ 100 (242)
T KOG3043|consen 21 REEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPP 100 (242)
T ss_pred ceEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcc
Confidence 5566777777766555444 7777777655 4455788999999999999999985 3111211 0011223344
Q ss_pred HHHHHHHHHHHHhCC--CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 78 HVIGDLVGLIDTVAP--NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 78 ~~~~~l~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
...+++..+++.+.. +..+|.++|++|||.++..+....| .+.+++.+.|...
T Consensus 101 ~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~ 155 (242)
T KOG3043|consen 101 KIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV 155 (242)
T ss_pred cchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC
Confidence 445566666666654 3689999999999999988888777 5777776665443
No 152
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.62 E-value=7.6e-07 Score=65.74 Aligned_cols=123 Identities=15% Similarity=0.222 Sum_probs=95.4
Q ss_pred cCCCCEEEEeCCCCCchhhH-----HHHHHHHHhCCCEEEecCCCCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHHh
Q 044507 21 KGQGPVILFLHGFPELWYSW-----RHQITALASLGYRAVAPDLRGFGDTDAPPD-----VTSYTCFHVIGDLVGLIDTV 90 (157)
Q Consensus 21 ~~~~p~vl~~hG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~-----~~~~~~~~~~~~l~~~~~~~ 90 (157)
..++|..|+|-|-+.....| .......++.|..|+..++|-+|.|.+..+ ....+..+...|+.++|+.+
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 34678999998877555444 234556667799999999999998866432 23466778888999999887
Q ss_pred CC-----CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCCCCchHHHHHH
Q 044507 91 AP-----NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPFGSINNVIEAL 143 (157)
Q Consensus 91 ~~-----~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 143 (157)
.. +..+.+.+|-|+-|.++..+-.++|+.+.+.|.-+++......+.+.....
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A~~DF~EY~~VV 220 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLAKVDFYEYLMVV 220 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeEEecHHHHHHHH
Confidence 64 235999999999999999999999999999999998888777766654444
No 153
>COG0627 Predicted esterase [General function prediction only]
Probab=98.60 E-value=3.9e-07 Score=64.85 Aligned_cols=111 Identities=23% Similarity=0.305 Sum_probs=74.9
Q ss_pred CCCEEEEeCCCCCchhhH---HHHHHHHHhCCCEEEecCCC--------------CCCCCCCCCCCC------CCCHHH-
Q 044507 23 QGPVILFLHGFPELWYSW---RHQITALASLGYRAVAPDLR--------------GFGDTDAPPDVT------SYTCFH- 78 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~---~~~~~~l~~~g~~v~~~d~~--------------g~g~s~~~~~~~------~~~~~~- 78 (157)
+-|+++++||..++...+ ..+-+...+.|..++++|-. |.+.+....... .+..+.
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tf 132 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETF 132 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHH
Confidence 347899999999886554 44455666778888887322 322222211111 134444
Q ss_pred HHHHHHHHHHHhCC-CC--CcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCC
Q 044507 79 VIGDLVGLIDTVAP-ND--EKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPF 133 (157)
Q Consensus 79 ~~~~l~~~~~~~~~-~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~ 133 (157)
..+++-..+++... .. .+..++||||||.-|+.+|.++|+++..+..+++...+.
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 33455545554322 22 289999999999999999999999999999999988876
No 154
>PRK04940 hypothetical protein; Provisional
Probab=98.58 E-value=6.6e-07 Score=58.36 Aligned_cols=93 Identities=20% Similarity=0.315 Sum_probs=57.0
Q ss_pred EEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC--CCcEEEEEEcH
Q 044507 27 ILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPN--DEKVFVVGHDW 104 (157)
Q Consensus 27 vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~i~l~G~S~ 104 (157)
||++||+.++..+-..-++.+. . +.+|.+-. + . ......+.+..+.+.+..+... .+++.++|.|+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~-~----~~p~~~~~--~-l----~~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSL 69 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQ-F----IDPDVRLI--S-Y----STLHPKHDMQHLLKEVDKMLQLSDDERPLICGVGL 69 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhhe-e----eCCCCeEE--E-C----CCCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeCh
Confidence 7899999988777221222222 1 12222211 0 0 1133445555666666543211 25799999999
Q ss_pred HHHHHHHHHhcCccceeEEEEeecccCCCC
Q 044507 105 GAFMAWFLCLFRPDRVKALVNLSVVFNPFG 134 (157)
Q Consensus 105 Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~ 134 (157)
||+.|..++.++. + ..|++.|+..|..
T Consensus 70 GGyyA~~La~~~g--~-~aVLiNPAv~P~~ 96 (180)
T PRK04940 70 GGYWAERIGFLCG--I-RQVIFNPNLFPEE 96 (180)
T ss_pred HHHHHHHHHHHHC--C-CEEEECCCCChHH
Confidence 9999999999886 3 5578888887744
No 155
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.58 E-value=3.6e-07 Score=64.75 Aligned_cols=121 Identities=20% Similarity=0.343 Sum_probs=76.7
Q ss_pred eeEEEECCEEE---EEeec----CCCC-EEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHH
Q 044507 6 HRIVKVNGINM---HIAEK----GQGP-VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCF 77 (157)
Q Consensus 6 ~~~~~~~g~~~---~~~~~----~~~p-~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~ 77 (157)
.++.++||..+ +.... +++. .||.+-|..|--+ ......-.+.||.|..+++||++.|...+ ...+..
T Consensus 217 ~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYE--vG~m~tP~~lgYsvLGwNhPGFagSTG~P--~p~n~~ 292 (517)
T KOG1553|consen 217 LKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYE--VGVMNTPAQLGYSVLGWNHPGFAGSTGLP--YPVNTL 292 (517)
T ss_pred EEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceE--eeeecChHHhCceeeccCCCCccccCCCC--Ccccch
Confidence 34555566543 33332 2343 5566666654211 11122334568999999999999987754 222333
Q ss_pred HHHHHHHH-HHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 78 HVIGDLVG-LIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 78 ~~~~~l~~-~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
..++.+.+ .|+.+.-..+.|++.|+|.||..+...|..||+ ++++|+.++.-+
T Consensus 293 nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDD 346 (517)
T KOG1553|consen 293 NAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDD 346 (517)
T ss_pred HHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhh
Confidence 33444443 344554467899999999999999999999997 899888765433
No 156
>PLN02606 palmitoyl-protein thioesterase
Probab=98.58 E-value=1e-06 Score=61.80 Aligned_cols=103 Identities=18% Similarity=0.128 Sum_probs=71.9
Q ss_pred CCEEEEeCCCC--CchhhHHHHHHHHHhC-CCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEE
Q 044507 24 GPVILFLHGFP--ELWYSWRHQITALASL-GYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVV 100 (157)
Q Consensus 24 ~p~vl~~hG~~--~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~ 100 (157)
..|||+.||.+ +.......+.+.+.+. |..+.++.. |-+ ........+.++++.+++.+.....-..-+.++
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~i-g~~----~~~s~~~~~~~Qv~~vce~l~~~~~L~~G~naI 100 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEI-GNG----VQDSLFMPLRQQASIACEKIKQMKELSEGYNIV 100 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEE-CCC----cccccccCHHHHHHHHHHHHhcchhhcCceEEE
Confidence 35899999999 5556777777777533 554444442 211 111133556677777777776643334579999
Q ss_pred EEcHHHHHHHHHHhcCcc--ceeEEEEeecccC
Q 044507 101 GHDWGAFMAWFLCLFRPD--RVKALVNLSVVFN 131 (157)
Q Consensus 101 G~S~Gg~~a~~~~~~~~~--~~~~~i~~~~~~~ 131 (157)
|+|.||.++..++.+.|+ .++.+|.++++..
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 999999999999999876 4999999987665
No 157
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.56 E-value=7.5e-07 Score=58.84 Aligned_cols=107 Identities=18% Similarity=0.249 Sum_probs=74.6
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCC---------CCC-----C--CCCCCCHHHHHHHHHHHHH
Q 044507 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDT---------DAP-----P--DVTSYTCFHVIGDLVGLID 88 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s---------~~~-----~--~~~~~~~~~~~~~l~~~~~ 88 (157)
.+||++||.+.+...|..+++.+.-+....++|.-|-.-.+ +.. . ..........+..+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 48999999999999998888888877888898865422111 000 0 0112233334445555555
Q ss_pred HhCC---CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 89 TVAP---NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 89 ~~~~---~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
+-.. ...+|.+-|.|+||.+++..+..+|..+.+++..++...
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p 129 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLP 129 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccc
Confidence 4332 457899999999999999999999887888777766554
No 158
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.53 E-value=1.3e-06 Score=62.35 Aligned_cols=111 Identities=14% Similarity=0.129 Sum_probs=74.4
Q ss_pred CCCEEEEeCCCCCchhhH-HHHHHHHHhCC--CEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCCcE
Q 044507 23 QGPVILFLHGFPELWYSW-RHQITALASLG--YRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP--NDEKV 97 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~-~~~~~~l~~~g--~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i 97 (157)
.+.+++|+||+.-+...- ...++.+...| ...+.+.||..|.-.... ....+.+....+++.+++.+.. ..++|
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn-~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYN-YDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecc-cchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 456999999998664443 44444444444 567888999877643321 1233444455667777776654 46899
Q ss_pred EEEEEcHHHHHHHHHHhc--------CccceeEEEEeecccCCCC
Q 044507 98 FVVGHDWGAFMAWFLCLF--------RPDRVKALVNLSVVFNPFG 134 (157)
Q Consensus 98 ~l~G~S~Gg~~a~~~~~~--------~~~~~~~~i~~~~~~~~~~ 134 (157)
+|++||||..++++.+.. -+.+|+.+|+.+|-.+.+.
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhh
Confidence 999999999999877653 2346888999887766533
No 159
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.50 E-value=7.2e-07 Score=59.61 Aligned_cols=106 Identities=16% Similarity=0.193 Sum_probs=76.9
Q ss_pred CCCEEEEeCCCCCc---hhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCCcE
Q 044507 23 QGPVILFLHGFPEL---WYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP--NDEKV 97 (157)
Q Consensus 23 ~~p~vl~~hG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i 97 (157)
.+..|||+-|.+.. .....++...|.+.++..+.+..+.+-. .+...++.+..+++..+++++.. ....|
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~-----G~Gt~slk~D~edl~~l~~Hi~~~~fSt~v 109 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYN-----GYGTFSLKDDVEDLKCLLEHIQLCGFSTDV 109 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccc-----ccccccccccHHHHHHHHHHhhccCcccce
Confidence 44578888887643 2234677889999999999998873211 11234556668889999997754 23599
Q ss_pred EEEEEcHHHHHHHHHHhc--CccceeEEEEeecccCCC
Q 044507 98 FVVGHDWGAFMAWFLCLF--RPDRVKALVNLSVVFNPF 133 (157)
Q Consensus 98 ~l~G~S~Gg~~a~~~~~~--~~~~~~~~i~~~~~~~~~ 133 (157)
+++|||.|+.-.+.++.. .+..+.+.|+.+|..+.+
T Consensus 110 VL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 110 VLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 999999999999988844 466788888888877644
No 160
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.48 E-value=2.2e-06 Score=63.09 Aligned_cols=84 Identities=23% Similarity=0.378 Sum_probs=59.7
Q ss_pred hHHHHHHHHHhCCCEE----E--ecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCCcEEEEEEcHHHHHHHH
Q 044507 39 SWRHQITALASLGYRA----V--APDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP-NDEKVFVVGHDWGAFMAWF 111 (157)
Q Consensus 39 ~~~~~~~~l~~~g~~v----~--~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~ 111 (157)
.|..+++.|.+.||.. + -+|+| .. .....+....+...++.+.. ..++++|+||||||.++..
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR-------~~---~~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~ 135 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWR-------LS---PAERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARY 135 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechh-------hc---hhhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHH
Confidence 6889999999877633 2 24554 11 01234556666666666543 4689999999999999999
Q ss_pred HHhcCc------cceeEEEEeecccCC
Q 044507 112 LCLFRP------DRVKALVNLSVVFNP 132 (157)
Q Consensus 112 ~~~~~~------~~~~~~i~~~~~~~~ 132 (157)
++...+ ..|+++|.++++...
T Consensus 136 fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 136 FLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 888764 259999999988763
No 161
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.48 E-value=9.5e-06 Score=53.99 Aligned_cols=90 Identities=19% Similarity=0.133 Sum_probs=65.2
Q ss_pred CchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHh
Q 044507 35 ELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCL 114 (157)
Q Consensus 35 ~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~ 114 (157)
++...|..+...+... +.++.++.+|++.+... ..+.+..+..+...+.... ...++.++|||+||.++...+.
T Consensus 10 ~~~~~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~----~~~~~~~~~~~~~~l~~~~-~~~~~~l~g~s~Gg~~a~~~a~ 83 (212)
T smart00824 10 SGPHEYARLAAALRGR-RDVSALPLPGFGPGEPL----PASADALVEAQAEAVLRAA-GGRPFVLVGHSSGGLLAHAVAA 83 (212)
T ss_pred CcHHHHHHHHHhcCCC-ccEEEecCCCCCCCCCC----CCCHHHHHHHHHHHHHHhc-CCCCeEEEEECHHHHHHHHHHH
Confidence 6677788888888765 89999999999765432 2355666665555554432 3578999999999999988877
Q ss_pred c---CccceeEEEEeeccc
Q 044507 115 F---RPDRVKALVNLSVVF 130 (157)
Q Consensus 115 ~---~~~~~~~~i~~~~~~ 130 (157)
. .+..+.+++++++..
T Consensus 84 ~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 84 RLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHhCCCCCcEEEEEccCC
Confidence 5 445678887776543
No 162
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.43 E-value=4.7e-06 Score=59.54 Aligned_cols=107 Identities=17% Similarity=0.123 Sum_probs=75.6
Q ss_pred CCCEEEEeCCCCCchhhH-HHH-HHHHHhCCCEEEecCCCCCCCCCCCCC--CCCCCHHH-------HHHHHHHHHHHhC
Q 044507 23 QGPVILFLHGFPELWYSW-RHQ-ITALASLGYRAVAPDLRGFGDTDAPPD--VTSYTCFH-------VIGDLVGLIDTVA 91 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~-~~~-~~~l~~~g~~v~~~d~~g~g~s~~~~~--~~~~~~~~-------~~~~l~~~~~~~~ 91 (157)
.+|.+|.++|.|...-.. ..+ +..|.++|+..+.+..|-||...+... ....+..+ .+.+...+++++.
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 468888999988754333 333 778888899999999999998765431 11222222 3345555555554
Q ss_pred C-CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecc
Q 044507 92 P-NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVV 129 (157)
Q Consensus 92 ~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~ 129 (157)
. +..++.+.|.||||.+|...+...|..+..+-.+++.
T Consensus 171 ~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~ 209 (348)
T PF09752_consen 171 REGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWS 209 (348)
T ss_pred hcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeeccc
Confidence 3 5679999999999999999999999877766666543
No 163
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.43 E-value=4.1e-06 Score=57.44 Aligned_cols=102 Identities=17% Similarity=0.189 Sum_probs=75.9
Q ss_pred CEEEEeCCCCCchhh--HHHHHHHHHhC-CCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEE
Q 044507 25 PVILFLHGFPELWYS--WRHQITALASL-GYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVG 101 (157)
Q Consensus 25 p~vl~~hG~~~~~~~--~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G 101 (157)
.|+|++||.+....+ ...+.+.+.+. |..+.+.+.- -| ..+.......+++..+++.+.....-.+-++++|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig-~g----~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg 98 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIG-DG----IKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVG 98 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEec-CC----cchhhhccHHHHHHHHHHHHhcchhccCceEEEE
Confidence 489999999976665 66777777776 7888888863 33 1122455677788888888886655568899999
Q ss_pred EcHHHHHHHHHHhcCcc-ceeEEEEeecccC
Q 044507 102 HDWGAFMAWFLCLFRPD-RVKALVNLSVVFN 131 (157)
Q Consensus 102 ~S~Gg~~a~~~~~~~~~-~~~~~i~~~~~~~ 131 (157)
.|.||.++..++..-++ .+...|.++++..
T Consensus 99 ~SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 99 YSQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred EccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 99999999888876443 4788888887654
No 164
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.42 E-value=8.3e-05 Score=53.17 Aligned_cols=110 Identities=14% Similarity=0.099 Sum_probs=73.4
Q ss_pred EEEEeCCCCCch---hhHHHHHHHHHhCCCEEEecCCCC--CCCCCC----------C--CCCCC---------------
Q 044507 26 VILFLHGFPELW---YSWRHQITALASLGYRAVAPDLRG--FGDTDA----------P--PDVTS--------------- 73 (157)
Q Consensus 26 ~vl~~hG~~~~~---~~~~~~~~~l~~~g~~v~~~d~~g--~g~s~~----------~--~~~~~--------------- 73 (157)
.||++||.+.+. ....++.+.|.+.|+.++.+.+|. ...... . .....
T Consensus 89 ~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 168 (310)
T PF12048_consen 89 AVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEA 168 (310)
T ss_pred EEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHH
Confidence 899999998764 334677889999999999988876 110000 0 00000
Q ss_pred --CCHHHHHHHHHHHHHHhCCC-CCcEEEEEEcHHHHHHHHHHhcCcc-ceeEEEEeecccCCCCC
Q 044507 74 --YTCFHVIGDLVGLIDTVAPN-DEKVFVVGHDWGAFMAWFLCLFRPD-RVKALVNLSVVFNPFGS 135 (157)
Q Consensus 74 --~~~~~~~~~l~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~-~~~~~i~~~~~~~~~~~ 135 (157)
.........+...+..+... ..+++++||+.|+..+..+....+. .++++|++++-......
T Consensus 169 ~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~ 234 (310)
T PF12048_consen 169 REAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDR 234 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchh
Confidence 01123344555555555443 4459999999999999999998764 48899999876654443
No 165
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.42 E-value=7e-06 Score=59.44 Aligned_cols=106 Identities=14% Similarity=0.169 Sum_probs=64.9
Q ss_pred CCCEEEEeCCCCCc----hhhHHH---HHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Q 044507 23 QGPVILFLHGFPEL----WYSWRH---QITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDE 95 (157)
Q Consensus 23 ~~p~vl~~hG~~~~----~~~~~~---~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 95 (157)
+.|+||++||+|-- ..+... +...+. ...++.+|+.-.... .........+.+.+.....+++.. +..
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~-~~~~~yPtQL~qlv~~Y~~Lv~~~--G~~ 195 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSD-EHGHKYPTQLRQLVATYDYLVESE--GNK 195 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccc-cCCCcCchHHHHHHHHHHHHHhcc--CCC
Confidence 45899999998732 222222 222333 368888898644310 001112334445555555555443 678
Q ss_pred cEEEEEEcHHHHHHHHHHhc--Cc---cceeEEEEeecccCCC
Q 044507 96 KVFVVGHDWGAFMAWFLCLF--RP---DRVKALVNLSVVFNPF 133 (157)
Q Consensus 96 ~i~l~G~S~Gg~~a~~~~~~--~~---~~~~~~i~~~~~~~~~ 133 (157)
+|.++|.|.||.+++.++.. .+ ..-+++|+++|...+.
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 99999999999999877653 11 1247899999987754
No 166
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.39 E-value=9.2e-06 Score=60.13 Aligned_cols=128 Identities=15% Similarity=0.160 Sum_probs=82.8
Q ss_pred ceeEEEEC---CEEEEEee------cCCCCEEEEeCCCCCchhhHHHHH-------------------HHHHhCCCEEEe
Q 044507 5 QHRIVKVN---GINMHIAE------KGQGPVILFLHGFPELWYSWRHQI-------------------TALASLGYRAVA 56 (157)
Q Consensus 5 ~~~~~~~~---g~~~~~~~------~~~~p~vl~~hG~~~~~~~~~~~~-------------------~~l~~~g~~v~~ 56 (157)
.+.+++++ +..++|+- ..++|+||++.|.+|.+..+..+. ..+.+. .+++.
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~ 90 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLF 90 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEE
T ss_pred EEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEE
Confidence 45667776 67888872 235699999999998776663331 112233 79999
Q ss_pred cC-CCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCC-----CCCcEEEEEEcHHHHHHHHHHhc----C------ccc
Q 044507 57 PD-LRGFGDTDAPPDV-TSYTCFHVIGDLVGLIDTVAP-----NDEKVFVVGHDWGAFMAWFLCLF----R------PDR 119 (157)
Q Consensus 57 ~d-~~g~g~s~~~~~~-~~~~~~~~~~~l~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~~~~----~------~~~ 119 (157)
+| +.|.|.|...... ...+.++.++++..+++.... ...+++|.|.|+||..+..++.. . +-.
T Consensus 91 iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~in 170 (415)
T PF00450_consen 91 IDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKIN 170 (415)
T ss_dssp E--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSE
T ss_pred EeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccc
Confidence 99 5589988654432 245777788888777775432 44699999999999877666553 2 345
Q ss_pred eeEEEEeecccCCC
Q 044507 120 VKALVNLSVVFNPF 133 (157)
Q Consensus 120 ~~~~i~~~~~~~~~ 133 (157)
++++++.++..++.
T Consensus 171 LkGi~IGng~~dp~ 184 (415)
T PF00450_consen 171 LKGIAIGNGWIDPR 184 (415)
T ss_dssp EEEEEEESE-SBHH
T ss_pred cccceecCcccccc
Confidence 78999888887753
No 167
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.37 E-value=8.9e-07 Score=64.30 Aligned_cols=103 Identities=16% Similarity=0.143 Sum_probs=74.5
Q ss_pred CCEEEEeCCCCCchhh-----HHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHH-HHHHHHHHHhCC--CCC
Q 044507 24 GPVILFLHGFPELWYS-----WRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVI-GDLVGLIDTVAP--NDE 95 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~-----~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~-~~l~~~~~~~~~--~~~ 95 (157)
++|++++|.+--.... -.+++..|.++|..|+.+++++=..+. ...+.++.+ ..+.+.++.+.. +.+
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~-----~~~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASL-----AAKNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhh-----hhccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 3589999987543322 267789999999999999987432222 244555555 444444444332 558
Q ss_pred cEEEEEEcHHHHHHHHHHhcCccc-eeEEEEeecccC
Q 044507 96 KVFVVGHDWGAFMAWFLCLFRPDR-VKALVNLSVVFN 131 (157)
Q Consensus 96 ~i~l~G~S~Gg~~a~~~~~~~~~~-~~~~i~~~~~~~ 131 (157)
+|.++|+|.||.++..+++..+.+ |+.++++.++.+
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 999999999999999998888877 999998887766
No 168
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.34 E-value=9.5e-06 Score=57.13 Aligned_cols=103 Identities=16% Similarity=0.123 Sum_probs=71.8
Q ss_pred CCEEEEeCCCCCchh--hHHHHHHHHHhC-CCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEE
Q 044507 24 GPVILFLHGFPELWY--SWRHQITALASL-GYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVV 100 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~--~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~ 100 (157)
..|+|+.||.|.+.. ....+.+.+.+. |..+.++.. |.+ ..+.....+.++++.+++.+.....-..-+.++
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~--~~~s~~~~~~~Qve~vce~l~~~~~l~~G~naI 99 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG--VGDSWLMPLTQQAEIACEKVKQMKELSQGYNIV 99 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC--ccccceeCHHHHHHHHHHHHhhchhhhCcEEEE
Confidence 358999999986533 445555555443 566655543 222 122245667777888887777643334579999
Q ss_pred EEcHHHHHHHHHHhcCcc--ceeEEEEeecccC
Q 044507 101 GHDWGAFMAWFLCLFRPD--RVKALVNLSVVFN 131 (157)
Q Consensus 101 G~S~Gg~~a~~~~~~~~~--~~~~~i~~~~~~~ 131 (157)
|+|.||.++..++.+.|+ .++.+|.++++..
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 999999999999999876 4999999987655
No 169
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.24 E-value=1.4e-05 Score=54.00 Aligned_cols=107 Identities=24% Similarity=0.124 Sum_probs=53.6
Q ss_pred CCCEEEEeCCCCCchhhHHH----HHHHHHhCCCEEEecCCCCCC-----CC------------------CCCCC---CC
Q 044507 23 QGPVILFLHGFPELWYSWRH----QITALASLGYRAVAPDLRGFG-----DT------------------DAPPD---VT 72 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~----~~~~l~~~g~~v~~~d~~g~g-----~s------------------~~~~~---~~ 72 (157)
+++-||++||++++..-++. +.+.|.+.++.++.+|-|--- .. +.... ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 46789999999999888754 445555536899988865211 00 00000 01
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcC--------ccceeEEEEeecccCC
Q 044507 73 SYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFR--------PDRVKALVNLSVVFNP 132 (157)
Q Consensus 73 ~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~--------~~~~~~~i~~~~~~~~ 132 (157)
....++..+.+.+.++.. ..=..|+|+|.||.+|..++... ...++-+|++++....
T Consensus 83 ~~~~~~sl~~l~~~i~~~---GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~ 147 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEEN---GPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP 147 (212)
T ss_dssp G---HHHHHHHHHHHHHH------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E
T ss_pred ccCHHHHHHHHHHHHHhc---CCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC
Confidence 233455555666666654 23578999999999998887642 1246788888876553
No 170
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.23 E-value=1.8e-06 Score=59.98 Aligned_cols=106 Identities=9% Similarity=0.039 Sum_probs=58.0
Q ss_pred CEEEEeCCCCCch---hhHHHHHHHHHhC--CCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEE
Q 044507 25 PVILFLHGFPELW---YSWRHQITALASL--GYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFV 99 (157)
Q Consensus 25 p~vl~~hG~~~~~---~~~~~~~~~l~~~--g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l 99 (157)
.|||+.||++.+. .....+.+.+.+. |.-|.+++.- -+.+.........++.+.++.+++.++....-..-+.+
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~~ 84 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGFNA 84 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-EEE
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcceee
Confidence 4899999998643 3455555444443 6677777652 11110000001244566666777777664322368999
Q ss_pred EEEcHHHHHHHHHHhcCcc-ceeEEEEeecccC
Q 044507 100 VGHDWGAFMAWFLCLFRPD-RVKALVNLSVVFN 131 (157)
Q Consensus 100 ~G~S~Gg~~a~~~~~~~~~-~~~~~i~~~~~~~ 131 (157)
+|+|.||.++..++.+.|+ .++.+|.++++..
T Consensus 85 IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 85 IGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp EEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 9999999999999999764 5999999987655
No 171
>COG3150 Predicted esterase [General function prediction only]
Probab=98.19 E-value=2.3e-05 Score=50.20 Aligned_cols=91 Identities=21% Similarity=0.330 Sum_probs=61.8
Q ss_pred EEEeCCCCCchhhHHHH--HHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcH
Q 044507 27 ILFLHGFPELWYSWRHQ--ITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDW 104 (157)
Q Consensus 27 vl~~hG~~~~~~~~~~~--~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~ 104 (157)
||++||+.+++.+.... .+.+.+.+ .. ...+.+. ...++.+.++.+..++... ..+...++|.|.
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~-~~-------i~y~~p~---l~h~p~~a~~ele~~i~~~--~~~~p~ivGssL 68 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDV-RD-------IEYSTPH---LPHDPQQALKELEKAVQEL--GDESPLIVGSSL 68 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccc-cc-------eeeecCC---CCCCHHHHHHHHHHHHHHc--CCCCceEEeecc
Confidence 79999999987777543 33344332 11 1112211 3456788899999999988 556799999999
Q ss_pred HHHHHHHHHhcCccceeEEEEeecccCCC
Q 044507 105 GAFMAWFLCLFRPDRVKALVNLSVVFNPF 133 (157)
Q Consensus 105 Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~ 133 (157)
||+.+.+++.+.. +++ +++.|...|.
T Consensus 69 GGY~At~l~~~~G--ira-v~~NPav~P~ 94 (191)
T COG3150 69 GGYYATWLGFLCG--IRA-VVFNPAVRPY 94 (191)
T ss_pred hHHHHHHHHHHhC--Chh-hhcCCCcCch
Confidence 9999999999875 444 4455555443
No 172
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.15 E-value=3.6e-06 Score=64.23 Aligned_cols=124 Identities=15% Similarity=0.220 Sum_probs=88.1
Q ss_pred ECCEEEEEe----e----cCCCCEEEEeCCCCCc--hhhHHHHHHHHHhCCCEEEecCCCCCCCCCC---C---CCCCCC
Q 044507 11 VNGINMHIA----E----KGQGPVILFLHGFPEL--WYSWRHQITALASLGYRAVAPDLRGFGDTDA---P---PDVTSY 74 (157)
Q Consensus 11 ~~g~~~~~~----~----~~~~p~vl~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~---~---~~~~~~ 74 (157)
.||+++++. + .+++|.+++.-|..|. ...|....-.|..+|+.......||-|+-.. . ......
T Consensus 427 ~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~N 506 (682)
T COG1770 427 DDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKN 506 (682)
T ss_pred CCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccc
Confidence 467766543 2 3356788888887654 3345544556778898888888888654311 1 111345
Q ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCCC
Q 044507 75 TCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPFG 134 (157)
Q Consensus 75 ~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~ 134 (157)
+..+.++....+++.-....+++++.|-|.||+++...+-..|+.++++|+--|..++..
T Consensus 507 Tf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvlt 566 (682)
T COG1770 507 TFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLT 566 (682)
T ss_pred cHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhh
Confidence 667777777777776555678999999999999999999999999999999888776433
No 173
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.10 E-value=5.4e-05 Score=50.55 Aligned_cols=104 Identities=19% Similarity=0.217 Sum_probs=64.0
Q ss_pred CEEEEeCCCCC-chhhH---------------HHHHHHHHhCCCEEEecCCCCC---CCCCC-CCCCCCCCHHHHHHHHH
Q 044507 25 PVILFLHGFPE-LWYSW---------------RHQITALASLGYRAVAPDLRGF---GDTDA-PPDVTSYTCFHVIGDLV 84 (157)
Q Consensus 25 p~vl~~hG~~~-~~~~~---------------~~~~~~l~~~g~~v~~~d~~g~---g~s~~-~~~~~~~~~~~~~~~l~ 84 (157)
..+|++||.|- ...+| .++++...+.||.|+..+.-.. -.+.. +........+...--..
T Consensus 102 kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw~ 181 (297)
T KOG3967|consen 102 KLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWK 181 (297)
T ss_pred ceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHHH
Confidence 48999999862 23334 2456777788999988876311 11111 11112222333332333
Q ss_pred HHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCcc--ceeEEEEeeccc
Q 044507 85 GLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPD--RVKALVNLSVVF 130 (157)
Q Consensus 85 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~--~~~~~i~~~~~~ 130 (157)
..+... ..+.+.+++||+||...+.+..++|+ ++-++.+-++++
T Consensus 182 ~~v~pa--~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 182 NIVLPA--KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHhccc--CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 444333 66899999999999999999999875 466666655553
No 174
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=98.10 E-value=6.7e-06 Score=62.50 Aligned_cols=91 Identities=20% Similarity=0.244 Sum_probs=61.1
Q ss_pred hHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCCcEEEEEEcHHHHHHHHHHhcC
Q 044507 39 SWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP--NDEKVFVVGHDWGAFMAWFLCLFR 116 (157)
Q Consensus 39 ~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~ 116 (157)
-|..+++.|.+.||. -.++.+....+..........++....+...++.+.. +.++++|+||||||.+++.++..-
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 568999999999997 4566555443332211112234455667777776543 358999999999999999876631
Q ss_pred ---------------ccceeEEEEeecccC
Q 044507 117 ---------------PDRVKALVNLSVVFN 131 (157)
Q Consensus 117 ---------------~~~~~~~i~~~~~~~ 131 (157)
...|++.|.+++++.
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred cccccccCCcchHHHHHHHHHheecccccC
Confidence 124788999988765
No 175
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.01 E-value=0.00018 Score=49.67 Aligned_cols=52 Identities=23% Similarity=0.319 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhC-CCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 80 IGDLVGLIDTVA-PNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 80 ~~~l~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
.+.+..+++... .+.++..++|||+||.+++.....+|+.+...++++|...
T Consensus 121 ~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 121 TEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred HHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 345556666533 2678899999999999999999999999999999988765
No 176
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.95 E-value=0.00014 Score=53.09 Aligned_cols=38 Identities=16% Similarity=0.245 Sum_probs=32.3
Q ss_pred CcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 95 EKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 95 ~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
-|++++|+|.||+++...+.--|..+++++=-++...|
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p 221 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALP 221 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccc
Confidence 48999999999999999999999999988766655443
No 177
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.95 E-value=5.1e-05 Score=53.74 Aligned_cols=87 Identities=20% Similarity=0.224 Sum_probs=52.0
Q ss_pred HHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-----CCCcEEEEEEcHHHHHHHHHHhc
Q 044507 41 RHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP-----NDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 41 ~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
..++..+.++||.|+.+|+.|.|..... ..+....+-|.....+++.. ...++.++|+|.||..++..+..
T Consensus 16 ~~~l~~~L~~GyaVv~pDY~Glg~~y~~----~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 16 APFLAAWLARGYAVVAPDYEGLGTPYLN----GRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHHHHHCCCEEEecCCCCCCCcccC----cHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 3456777789999999999999872111 11222222222222222221 13689999999999988766544
Q ss_pred C----ccc---eeEEEEeecccC
Q 044507 116 R----PDR---VKALVNLSVVFN 131 (157)
Q Consensus 116 ~----~~~---~~~~i~~~~~~~ 131 (157)
. |+. +.+.++.+++.+
T Consensus 92 ~~~YApeL~~~l~Gaa~gg~~~d 114 (290)
T PF03583_consen 92 APSYAPELNRDLVGAAAGGPPAD 114 (290)
T ss_pred hHHhCcccccceeEEeccCCccC
Confidence 2 332 566666555544
No 178
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.92 E-value=3.1e-05 Score=54.19 Aligned_cols=110 Identities=15% Similarity=0.157 Sum_probs=69.0
Q ss_pred CCCEEEEeCCCC-CchhhHHHHHHHHHhCC----CEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC---CC
Q 044507 23 QGPVILFLHGFP-ELWYSWRHQITALASLG----YRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP---ND 94 (157)
Q Consensus 23 ~~p~vl~~hG~~-~~~~~~~~~~~~l~~~g----~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~ 94 (157)
+.|+++++||-- -.........+.+...| ..++.+|.-..-................+.++...++.... ..
T Consensus 97 k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~~a 176 (299)
T COG2382 97 KYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSADA 176 (299)
T ss_pred cccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCcccccC
Confidence 447899999753 12222334455555543 56677765321111110001122334456666666665543 34
Q ss_pred CcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 95 EKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 95 ~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
..-++.|.|+||.+++..+..+|+++..++..+|.+..
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~ 214 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWW 214 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCcccc
Confidence 67899999999999999999999999999999887663
No 179
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.89 E-value=5.2e-05 Score=58.25 Aligned_cols=108 Identities=21% Similarity=0.225 Sum_probs=67.8
Q ss_pred CCEEEEeCCCCC---chhhH--HHHHHHHHhCCCEEEecCCC----CC---CCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 044507 24 GPVILFLHGFPE---LWYSW--RHQITALASLGYRAVAPDLR----GF---GDTDAPPDVTSYTCFHVIGDLVGLIDTVA 91 (157)
Q Consensus 24 ~p~vl~~hG~~~---~~~~~--~~~~~~l~~~g~~v~~~d~~----g~---g~s~~~~~~~~~~~~~~~~~l~~~~~~~~ 91 (157)
-|++|++||.+- +...+ ......+..+...||.+++| |+ |.+..+.+....+.....+.+.+-|....
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 589999999863 22222 22233444556888999987 22 22222222233444455666777777777
Q ss_pred CCCCcEEEEEEcHHHHHHHHHHhc--CccceeEEEEeecccC
Q 044507 92 PNDEKVFVVGHDWGAFMAWFLCLF--RPDRVKALVNLSVVFN 131 (157)
Q Consensus 92 ~~~~~i~l~G~S~Gg~~a~~~~~~--~~~~~~~~i~~~~~~~ 131 (157)
.++++|.++|||.||..+..+... ....+.++|.+++...
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 688999999999999888666553 2245666677665433
No 180
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.86 E-value=1.6e-05 Score=60.19 Aligned_cols=128 Identities=17% Similarity=0.159 Sum_probs=88.7
Q ss_pred cceeEEEE-CCEEEEEeec--C----CCCEEEEeCCC-C-CchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCC------
Q 044507 4 IQHRIVKV-NGINMHIAEK--G----QGPVILFLHGF-P-ELWYSWRHQITALASLGYRAVAPDLRGFGDTDAP------ 68 (157)
Q Consensus 4 ~~~~~~~~-~g~~~~~~~~--~----~~p~vl~~hG~-~-~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~------ 68 (157)
+|+...++ ||.+|+|-.- + +.|++|+--|. . .....|.+......++|...+..+.||-|+-.+.
T Consensus 394 veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~ 473 (648)
T COG1505 394 VEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGM 473 (648)
T ss_pred EEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHh
Confidence 45555555 8999987632 2 34677665443 2 2234565666778889999999999998765321
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 69 PDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 69 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
....+...++.+.-..+++++=...++++.+.|-|.||.++......+|+.+.++++--|.++
T Consensus 474 k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllD 536 (648)
T COG1505 474 KENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLD 536 (648)
T ss_pred hhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhh
Confidence 111334455555556666665444678999999999999999999999999999888766554
No 181
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.79 E-value=3.4e-05 Score=58.88 Aligned_cols=109 Identities=18% Similarity=0.185 Sum_probs=77.6
Q ss_pred CCCEEEEeCCCCCc--hhhHHHHHHHHHhCCCEEEecCCCCCCCCCC--CCC----CCCCCHHHHHHHHHHHHHHhCCCC
Q 044507 23 QGPVILFLHGFPEL--WYSWRHQITALASLGYRAVAPDLRGFGDTDA--PPD----VTSYTCFHVIGDLVGLIDTVAPND 94 (157)
Q Consensus 23 ~~p~vl~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~--~~~----~~~~~~~~~~~~l~~~~~~~~~~~ 94 (157)
++|.+|+.+|.-+- ...|+.-...|..+|......|.||-|+-.. ..+ -..-+..+.+.....+++.-...+
T Consensus 469 ~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~ 548 (712)
T KOG2237|consen 469 SKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQP 548 (712)
T ss_pred CCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCc
Confidence 56888888876543 3345544445556899999999999765321 111 123445556666666666544578
Q ss_pred CcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 95 EKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 95 ~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
++..+.|.|.||.++..+.-.+|+.++++|+--|.++
T Consensus 549 ~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 549 SKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred cceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 9999999999999999999999999999888777665
No 182
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.79 E-value=7.8e-05 Score=47.73 Aligned_cols=43 Identities=21% Similarity=0.158 Sum_probs=33.2
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcCcc----ceeEEEEeecccCCCCC
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFRPD----RVKALVNLSVVFNPFGS 135 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~~~----~~~~~i~~~~~~~~~~~ 135 (157)
+..++.++|||+||.+|..++..... ....++.++++......
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~ 72 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAA 72 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchH
Confidence 56899999999999999988887544 56678888776654433
No 183
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=97.73 E-value=0.00013 Score=53.23 Aligned_cols=107 Identities=19% Similarity=0.257 Sum_probs=82.3
Q ss_pred CCCEEEEeCCCCCchhhH-HHHHHHHHhCCCEEEecCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHhCC-CCCcEEE
Q 044507 23 QGPVILFLHGFPELWYSW-RHQITALASLGYRAVAPDLRGFGDTDAP-PDVTSYTCFHVIGDLVGLIDTVAP-NDEKVFV 99 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~-~~~~~~~~~~~~~~l~~~~~~~~~-~~~~i~l 99 (157)
+.|+|++-.|++-..... ......| +-+-+.+++|-++.|.+. .++...++.+.+.|...+++.++. =.++.+-
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWIS 138 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWIS 138 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCcee
Confidence 568999999987653322 2222222 357888999999998764 477788999999888877777643 3478999
Q ss_pred EEEcHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 100 VGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 100 ~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
.|.|-||+.++..-.-+|+.+++.|..-++.+.
T Consensus 139 TG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~~ 171 (448)
T PF05576_consen 139 TGGSKGGMTAVYYRRFYPDDVDGTVAYVAPNDV 171 (448)
T ss_pred cCcCCCceeEEEEeeeCCCCCCeeeeeeccccc
Confidence 999999999998888899999999998877663
No 184
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.72 E-value=0.0011 Score=49.55 Aligned_cols=128 Identities=11% Similarity=0.088 Sum_probs=73.9
Q ss_pred ceeEEEEC---CEEEEEee------cCCCCEEEEeCCCCCchhhHHHHH----------------HHH-------HhCCC
Q 044507 5 QHRIVKVN---GINMHIAE------KGQGPVILFLHGFPELWYSWRHQI----------------TAL-------ASLGY 52 (157)
Q Consensus 5 ~~~~~~~~---g~~~~~~~------~~~~p~vl~~hG~~~~~~~~~~~~----------------~~l-------~~~g~ 52 (157)
.+.+++++ +..++|+- +.+.|+|+++.|.+|.+....-+. ..+ .+ -.
T Consensus 38 ~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~-~a 116 (433)
T PLN03016 38 ETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTK-MA 116 (433)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhh-cC
Confidence 35566663 35677662 225689999999987655321110 011 12 26
Q ss_pred EEEecC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----C-CCCcEEEEEEcHHHHHHHHHHhc----C------
Q 044507 53 RAVAPD-LRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVA----P-NDEKVFVVGHDWGAFMAWFLCLF----R------ 116 (157)
Q Consensus 53 ~v~~~d-~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~----~-~~~~i~l~G~S~Gg~~a~~~~~~----~------ 116 (157)
+++.+| +.|.|.|.........+-.+.++++..+++... . ...+++|.|.|+||..+-.++.. +
T Consensus 117 nllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~ 196 (433)
T PLN03016 117 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 196 (433)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCC
Confidence 889999 558888854322111121222344544444322 1 34789999999999866665553 2
Q ss_pred ccceeEEEEeecccCCC
Q 044507 117 PDRVKALVNLSVVFNPF 133 (157)
Q Consensus 117 ~~~~~~~i~~~~~~~~~ 133 (157)
+-.++++++-.|..++.
T Consensus 197 ~inLkGi~iGNg~t~~~ 213 (433)
T PLN03016 197 PINLQGYMLGNPVTYMD 213 (433)
T ss_pred cccceeeEecCCCcCch
Confidence 12467888877766554
No 185
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.70 E-value=0.0002 Score=52.14 Aligned_cols=78 Identities=23% Similarity=0.171 Sum_probs=60.1
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCCcEEEEEEc
Q 044507 26 VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP--NDEKVFVVGHD 103 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~l~G~S 103 (157)
.-||+.|=||...-=....+.|+++|+.||.+|-.-|-.+ ..+.++.+.|+..+++.... +..++.++|+|
T Consensus 262 ~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~-------~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGyS 334 (456)
T COG3946 262 VAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWS-------ERTPEQIAADLSRLIRFYARRWGAKRVLLIGYS 334 (456)
T ss_pred EEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhc-------cCCHHHHHHHHHHHHHHHHHhhCcceEEEEeec
Confidence 5566777777655557788999999999999996655544 34567788888888887654 56899999999
Q ss_pred HHHHHHH
Q 044507 104 WGAFMAW 110 (157)
Q Consensus 104 ~Gg~~a~ 110 (157)
+|+-+.-
T Consensus 335 fGADvlP 341 (456)
T COG3946 335 FGADVLP 341 (456)
T ss_pred ccchhhH
Confidence 9997653
No 186
>PLN02209 serine carboxypeptidase
Probab=97.68 E-value=0.0011 Score=49.63 Aligned_cols=128 Identities=13% Similarity=0.103 Sum_probs=75.0
Q ss_pred eeEEEEC---CEEEEEee------cCCCCEEEEeCCCCCchhhHHHHH-------H---------HHHh------CCCEE
Q 044507 6 HRIVKVN---GINMHIAE------KGQGPVILFLHGFPELWYSWRHQI-------T---------ALAS------LGYRA 54 (157)
Q Consensus 6 ~~~~~~~---g~~~~~~~------~~~~p~vl~~hG~~~~~~~~~~~~-------~---------~l~~------~g~~v 54 (157)
..++.++ +..++|+- ..+.|+++++.|.+|.+..+..+. . .+.. +-.++
T Consensus 41 sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anl 120 (437)
T PLN02209 41 TGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANI 120 (437)
T ss_pred EEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcE
Confidence 4556663 35666652 225689999999987665442211 0 1111 12688
Q ss_pred EecC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-----CCCcEEEEEEcHHHHHHHHHHhc----C------cc
Q 044507 55 VAPD-LRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP-----NDEKVFVVGHDWGAFMAWFLCLF----R------PD 118 (157)
Q Consensus 55 ~~~d-~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~~~~----~------~~ 118 (157)
+.+| +.|.|.|.........+.++.++++..+++.... ...+++|.|.|+||..+-.++.. + +-
T Consensus 121 lfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~i 200 (437)
T PLN02209 121 IFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPI 200 (437)
T ss_pred EEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCce
Confidence 8999 5588887533221222333344666655554322 34689999999999766555543 2 12
Q ss_pred ceeEEEEeecccCCC
Q 044507 119 RVKALVNLSVVFNPF 133 (157)
Q Consensus 119 ~~~~~i~~~~~~~~~ 133 (157)
.++++++.++..++.
T Consensus 201 nl~Gi~igng~td~~ 215 (437)
T PLN02209 201 NLQGYVLGNPITHIE 215 (437)
T ss_pred eeeeEEecCcccChh
Confidence 467888887766643
No 187
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.67 E-value=0.0015 Score=44.81 Aligned_cols=91 Identities=18% Similarity=0.216 Sum_probs=53.5
Q ss_pred EEEEeCCCC-C--chhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHH----HHHHHHHhCC------
Q 044507 26 VILFLHGFP-E--LWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGD----LVGLIDTVAP------ 92 (157)
Q Consensus 26 ~vl~~hG~~-~--~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~----l~~~~~~~~~------ 92 (157)
+|=|+-|.- + ..-.|+.+.+.|.++||.|++.-+.- ..+-...+.+ ....++.+..
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-----------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~ 87 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-----------TFDHQAIAREVWERFERCLRALQKRGGLDP 87 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-----------CCcHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 455555531 2 23457899999999999999887641 1122222222 2222222211
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEee
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLS 127 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~ 127 (157)
..-+++-+|||+||-+-+.+...++..-++-++++
T Consensus 88 ~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 88 AYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred ccCCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 12478899999999988888776654445555554
No 188
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.67 E-value=0.00068 Score=51.08 Aligned_cols=82 Identities=21% Similarity=0.244 Sum_probs=59.1
Q ss_pred HHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC---CCCcEEEEEEcHHHHHHHHHHhcCccceeE
Q 044507 46 ALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP---NDEKVFVVGHDWGAFMAWFLCLFRPDRVKA 122 (157)
Q Consensus 46 ~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~ 122 (157)
..-..|+.|+.+... ..+. +..++++.......+++.+.. +..+..++|-|.||-.++.+++.+|+.+.-
T Consensus 95 ~AL~~GHPvYFV~F~-----p~P~--pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gp 167 (581)
T PF11339_consen 95 VALRAGHPVYFVGFF-----PEPE--PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGP 167 (581)
T ss_pred HHHHcCCCeEEEEec-----CCCC--CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCc
Confidence 334458888777653 2221 445666666655555555443 335999999999999999999999999999
Q ss_pred EEEeecccCCCC
Q 044507 123 LVNLSVVFNPFG 134 (157)
Q Consensus 123 ~i~~~~~~~~~~ 134 (157)
+|+-+++++...
T Consensus 168 lvlaGaPlsywa 179 (581)
T PF11339_consen 168 LVLAGAPLSYWA 179 (581)
T ss_pred eeecCCCccccc
Confidence 999888887544
No 189
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.65 E-value=0.00021 Score=48.37 Aligned_cols=39 Identities=26% Similarity=0.305 Sum_probs=31.7
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
+.++|.|+|.|.||-+|+.++..+| .|+++|+++|..-.
T Consensus 20 ~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 20 DPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp --SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred CCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 4579999999999999999999999 79999999876543
No 190
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.59 E-value=0.0015 Score=42.83 Aligned_cols=55 Identities=20% Similarity=0.167 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHhCC---CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 77 FHVIGDLVGLIDTVAP---NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 77 ~~~~~~l~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
+.-+..|..+++.+.. ...++.++|||||+.++...+...+..+..++++++|-.
T Consensus 88 ~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 3455567777666543 356899999999999999888876677888888876543
No 191
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.57 E-value=0.00029 Score=44.19 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhc
Q 044507 80 IGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 80 ~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
.+.+.+..+.. ...++.+.|||+||.+|..++..
T Consensus 51 ~~~l~~~~~~~--~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 51 LDALKELVEKY--PDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc--cCccchhhccchHHHHHHHHHHh
Confidence 34444444443 34799999999999999887775
No 192
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.43 E-value=0.00016 Score=53.51 Aligned_cols=86 Identities=21% Similarity=0.355 Sum_probs=55.0
Q ss_pred hhHHHHHHHHHhCCCE----E--EecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCCcEEEEEEcHHHHHH
Q 044507 38 YSWRHQITALASLGYR----A--VAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP--NDEKVFVVGHDWGAFMA 109 (157)
Q Consensus 38 ~~~~~~~~~l~~~g~~----v--~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~l~G~S~Gg~~a 109 (157)
..|..+++.|..-||. + ..+|+|-.-.+ ....++....+...++.... +.+|+++++||||+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~-------~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~ 196 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHN-------SEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYV 196 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCC-------hhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHH
Confidence 3567888889888875 2 44455421111 11223344455555554433 45899999999999999
Q ss_pred HHHHhcCcc--------ceeEEEEeeccc
Q 044507 110 WFLCLFRPD--------RVKALVNLSVVF 130 (157)
Q Consensus 110 ~~~~~~~~~--------~~~~~i~~~~~~ 130 (157)
+.+....++ .|++++.++++.
T Consensus 197 lyFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 197 LYFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HHHHhcccccchhHHHHHHHHHHccCchh
Confidence 999888765 366666666544
No 193
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.40 E-value=0.0057 Score=41.78 Aligned_cols=49 Identities=18% Similarity=0.228 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcC----ccceeEEEEeecccC
Q 044507 80 IGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFR----PDRVKALVNLSVVFN 131 (157)
Q Consensus 80 ~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~----~~~~~~~i~~~~~~~ 131 (157)
...+..+++.. ..++.+.|||.||.+|...+... .++|..++..++|--
T Consensus 72 ~~yl~~~~~~~---~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 72 LAYLKKIAKKY---PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHHHhC---CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 33444444443 34699999999999999988873 357888887776543
No 194
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.34 E-value=0.0074 Score=40.74 Aligned_cols=106 Identities=21% Similarity=0.122 Sum_probs=65.0
Q ss_pred CCCEEEEeCCCCCchhhHHH----HHHHHHhCCCEEEecCCCCC---------CCC----CCC---------------CC
Q 044507 23 QGPVILFLHGFPELWYSWRH----QITALASLGYRAVAPDLRGF---------GDT----DAP---------------PD 70 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~----~~~~l~~~g~~v~~~d~~g~---------g~s----~~~---------------~~ 70 (157)
.++-||++||+..+...+.. +.+.+.+. +..+.+|-|-- ..+ ... ..
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 35689999999988887743 45566666 88888887621 000 000 00
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcC--c----c--ceeEEEEeecccCC
Q 044507 71 VTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFR--P----D--RVKALVNLSVVFNP 132 (157)
Q Consensus 71 ~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~--~----~--~~~~~i~~~~~~~~ 132 (157)
......+...+.+.+.+... ..==.|+|+|.|+.++..++... + . .++-+|++++....
T Consensus 83 ~~~~~~eesl~yl~~~i~en---GPFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~ 149 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKEN---GPFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFP 149 (230)
T ss_pred ccccChHHHHHHHHHHHHHh---CCCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCC
Confidence 01122334455556666554 34457999999999998888731 1 1 25777888776554
No 195
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=97.29 E-value=0.0011 Score=40.22 Aligned_cols=41 Identities=20% Similarity=0.498 Sum_probs=26.9
Q ss_pred ccceeEEEECCEEEEEeecC----CCCEEEEeCCCCCchhhHHHH
Q 044507 3 GIQHRIVKVNGINMHIAEKG----QGPVILFLHGFPELWYSWRHQ 43 (157)
Q Consensus 3 ~~~~~~~~~~g~~~~~~~~~----~~p~vl~~hG~~~~~~~~~~~ 43 (157)
.+..-+++++|..||+.... +..|+|++||++|+...+.++
T Consensus 67 ~~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 67 SFPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp TS-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHH
T ss_pred cCCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhh
Confidence 34567889999999987433 335999999999998887654
No 196
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.25 E-value=0.0012 Score=49.51 Aligned_cols=111 Identities=21% Similarity=0.119 Sum_probs=69.7
Q ss_pred CCCEEEEeCCCCCchhhHHHHHH-------------------HHHhCCCEEEecC-CCCCCCCCCCCCCCCCCHHHHHHH
Q 044507 23 QGPVILFLHGFPELWYSWRHQIT-------------------ALASLGYRAVAPD-LRGFGDTDAPPDVTSYTCFHVIGD 82 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~-------------------~l~~~g~~v~~~d-~~g~g~s~~~~~~~~~~~~~~~~~ 82 (157)
+.|.++++.|.+|.+..+-.+.+ .+... -.++.+| +-|.|.|....+....+.....+|
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D 178 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAGKD 178 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccchh
Confidence 46899999999988776644321 11122 4788889 668888864333234444444444
Q ss_pred HHHHHHH-------hCCCCCcEEEEEEcHHHHHHHHHHhcCcc---ceeEEEEeecccCCCC
Q 044507 83 LVGLIDT-------VAPNDEKVFVVGHDWGAFMAWFLCLFRPD---RVKALVNLSVVFNPFG 134 (157)
Q Consensus 83 l~~~~~~-------~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~---~~~~~i~~~~~~~~~~ 134 (157)
+..+.+. ......+.+|+|.|+||.-+..+|..--+ ..++++++++......
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred HHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 4433332 22234699999999999988888775333 3567777777666554
No 197
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=97.18 E-value=0.0041 Score=46.69 Aligned_cols=128 Identities=13% Similarity=0.064 Sum_probs=74.8
Q ss_pred ceeEEEEC---CEEEEEee------cCCCCEEEEeCCCCCchhhHHHHHHH-------------------HHhCCCEEEe
Q 044507 5 QHRIVKVN---GINMHIAE------KGQGPVILFLHGFPELWYSWRHQITA-------------------LASLGYRAVA 56 (157)
Q Consensus 5 ~~~~~~~~---g~~~~~~~------~~~~p~vl~~hG~~~~~~~~~~~~~~-------------------l~~~g~~v~~ 56 (157)
...++.++ +..++|+- +.++|.||++.|.+|.+..- .+..+ ..+ -.+++.
T Consensus 45 ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk-~aNiLf 122 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNK-EANILF 122 (454)
T ss_pred ccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccc-cccEEE
Confidence 34667775 78898872 23578999999998754332 22111 112 257788
Q ss_pred cCCC-CCCCCCCCCCC-CCCCHHHHHHHHHHHHHH-hCC----CCCcEEEEEEcHHHHHHHHHHhc----Cc------cc
Q 044507 57 PDLR-GFGDTDAPPDV-TSYTCFHVIGDLVGLIDT-VAP----NDEKVFVVGHDWGAFMAWFLCLF----RP------DR 119 (157)
Q Consensus 57 ~d~~-g~g~s~~~~~~-~~~~~~~~~~~l~~~~~~-~~~----~~~~i~l~G~S~Gg~~a~~~~~~----~~------~~ 119 (157)
+|.| |.|.|-..... ...+-+..+++...++.. +.. ...++.|.|.|++|..+-.+|.+ +. -.
T Consensus 123 Ld~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iN 202 (454)
T KOG1282|consen 123 LDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNIN 202 (454)
T ss_pred EecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCccc
Confidence 8776 67776432211 123444445554444432 222 45789999999999766666553 21 23
Q ss_pred eeEEEEeecccCCCC
Q 044507 120 VKALVNLSVVFNPFG 134 (157)
Q Consensus 120 ~~~~i~~~~~~~~~~ 134 (157)
++++++-.|..++..
T Consensus 203 LkG~~IGNg~td~~~ 217 (454)
T KOG1282|consen 203 LKGYAIGNGLTDPEI 217 (454)
T ss_pred ceEEEecCcccCccc
Confidence 677776666666443
No 198
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=97.17 E-value=0.0019 Score=46.71 Aligned_cols=61 Identities=18% Similarity=0.215 Sum_probs=41.1
Q ss_pred HHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCcc-----ceeEEEEeecccCCCCCchHHHHHHHh
Q 044507 82 DLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPD-----RVKALVNLSVVFNPFGSINNVIEALRA 145 (157)
Q Consensus 82 ~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~ 145 (157)
.+.+.+.....+.+++.++|||+|+.+...++..-.+ .|+.++++++|.+.+ .+.|..++.
T Consensus 207 ~LA~~L~~~~~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~---~~~W~~~r~ 272 (345)
T PF05277_consen 207 VLADALLSRNQGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD---PEEWRKIRS 272 (345)
T ss_pred HHHHHHHHhcCCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC---HHHHHHHHH
Confidence 3444444443466789999999999998877665333 378999998877654 334444443
No 199
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.12 E-value=0.0042 Score=41.94 Aligned_cols=80 Identities=18% Similarity=0.233 Sum_probs=51.7
Q ss_pred CCEEEEeCCCCCchhhHHHHHHHHHhCCCE-EEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 044507 24 GPVILFLHGFPELWYSWRHQITALASLGYR-AVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGH 102 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~-v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~ 102 (157)
...|||+.|++.+...+.++. .+.++. +++.|+|..-. + . + +. ..+.|.++|+
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~---~~~~~D~l~~yDYr~l~~----------d-------~-~-~~----~y~~i~lvAW 64 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI---LPENYDVLICYDYRDLDF----------D-------F-D-LS----GYREIYLVAW 64 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc---CCCCccEEEEecCccccc----------c-------c-c-cc----cCceEEEEEE
Confidence 458999999999877776543 122343 46778862111 0 0 0 11 3479999999
Q ss_pred cHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 103 DWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 103 S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
|||-.+|.++....| ++..+++.+...
T Consensus 65 SmGVw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 65 SMGVWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred eHHHHHHHHHhccCC--cceeEEEECCCC
Confidence 999999888766543 556666665443
No 200
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.08 E-value=0.0019 Score=44.19 Aligned_cols=23 Identities=39% Similarity=0.535 Sum_probs=19.9
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhc
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
+..++.+.|||+||.+|..++..
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHH
Confidence 45789999999999999887775
No 201
>PLN00413 triacylglycerol lipase
Probab=97.07 E-value=0.0031 Score=47.26 Aligned_cols=57 Identities=14% Similarity=0.233 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhc---C-----ccceeEEEEeecccCCCCCch
Q 044507 79 VIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLF---R-----PDRVKALVNLSVVFNPFGSIN 137 (157)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~---~-----~~~~~~~i~~~~~~~~~~~~~ 137 (157)
....+.++++.. ...++.+.|||+||.+|...+.. + ..++.++..++.|.-.+..+.
T Consensus 270 i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRVGN~~FA 334 (479)
T PLN00413 270 ILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRVGDEDFG 334 (479)
T ss_pred HHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCCccHHHH
Confidence 344555555554 56789999999999999887742 1 123456777766554443333
No 202
>PLN02162 triacylglycerol lipase
Probab=97.05 E-value=0.0039 Score=46.65 Aligned_cols=55 Identities=13% Similarity=0.140 Sum_probs=33.6
Q ss_pred HHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhc---C-----ccceeEEEEeecccCCCCCchH
Q 044507 82 DLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLF---R-----PDRVKALVNLSVVFNPFGSINN 138 (157)
Q Consensus 82 ~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~---~-----~~~~~~~i~~~~~~~~~~~~~~ 138 (157)
.+.+.+... ...++.+.|||+||.+|...+.. . .+++.+++.++.|.-.+..+.+
T Consensus 267 ~L~~lL~k~--p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRVGn~~FA~ 329 (475)
T PLN02162 267 MLRDKLARN--KNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVGDEDFGE 329 (475)
T ss_pred HHHHHHHhC--CCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCccCHHHHH
Confidence 334444333 45789999999999999887542 1 1234566777665544444333
No 203
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.88 E-value=0.0061 Score=40.16 Aligned_cols=77 Identities=17% Similarity=0.093 Sum_probs=45.4
Q ss_pred CEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCCcEEEEEEcHHHHHHHHHHhc------CccceeEE
Q 044507 52 YRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP--NDEKVFVVGHDWGAFMAWFLCLF------RPDRVKAL 123 (157)
Q Consensus 52 ~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~------~~~~~~~~ 123 (157)
..+..+++|-..... ....+...-..++...++.... ...+++++|+|.|+.++...+.. ..++|.++
T Consensus 40 ~~~~~V~YpA~~~~~----~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~av 115 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN----SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAV 115 (179)
T ss_dssp EEEEE--S---SCGG----SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEE
T ss_pred eEEEecCCCCCCCcc----cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEE
Confidence 455556666322211 1223444455555555554322 45799999999999999998876 23579999
Q ss_pred EEeecccCC
Q 044507 124 VNLSVVFNP 132 (157)
Q Consensus 124 i~~~~~~~~ 132 (157)
++++-+...
T Consensus 116 vlfGdP~~~ 124 (179)
T PF01083_consen 116 VLFGDPRRG 124 (179)
T ss_dssp EEES-TTTB
T ss_pred EEecCCccc
Confidence 999866553
No 204
>PLN02408 phospholipase A1
Probab=96.82 E-value=0.0029 Score=46.10 Aligned_cols=37 Identities=19% Similarity=0.276 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhc
Q 044507 79 VIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
..+++..+++.......+|.+.|||+||.+|...+..
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 4455566665543223469999999999999887775
No 205
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.72 E-value=0.0056 Score=39.80 Aligned_cols=39 Identities=23% Similarity=0.350 Sum_probs=34.8
Q ss_pred CCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccCC
Q 044507 94 DEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNP 132 (157)
Q Consensus 94 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~ 132 (157)
+....+-|-||||..++.+..++|+.+.++|.+++.++.
T Consensus 100 pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 100 PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred CCCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 356788999999999999999999999999999987763
No 206
>PLN02571 triacylglycerol lipase
Probab=96.67 E-value=0.0041 Score=46.02 Aligned_cols=39 Identities=18% Similarity=0.290 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhc
Q 044507 77 FHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 77 ~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
++...++..+++.......+|++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 345556666666553223479999999999999887764
No 207
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=96.64 E-value=0.037 Score=37.91 Aligned_cols=85 Identities=20% Similarity=0.121 Sum_probs=53.3
Q ss_pred CCEEEecCCCCC-CC-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCc------cceeE
Q 044507 51 GYRAVAPDLRGF-GD-TDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRP------DRVKA 122 (157)
Q Consensus 51 g~~v~~~d~~g~-g~-s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~------~~~~~ 122 (157)
|+.+..+++|.. +- +.........+..+-++.+.+.++......++++++|+|+|+.++...+.+.- ...-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 567777777752 11 11111113566777777788888775446689999999999999987766531 12335
Q ss_pred EEEeecccCCCCC
Q 044507 123 LVNLSVVFNPFGS 135 (157)
Q Consensus 123 ~i~~~~~~~~~~~ 135 (157)
+++++-+..+...
T Consensus 82 fVl~gnP~rp~GG 94 (225)
T PF08237_consen 82 FVLIGNPRRPNGG 94 (225)
T ss_pred EEEecCCCCCCCc
Confidence 6777666555443
No 208
>PLN02310 triacylglycerol lipase
Probab=96.59 E-value=0.01 Score=43.93 Aligned_cols=56 Identities=16% Similarity=0.220 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHhCC--CCCcEEEEEEcHHHHHHHHHHhc----CccceeEEEEeecccCC
Q 044507 77 FHVIGDLVGLIDTVAP--NDEKVFVVGHDWGAFMAWFLCLF----RPDRVKALVNLSVVFNP 132 (157)
Q Consensus 77 ~~~~~~l~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~----~~~~~~~~i~~~~~~~~ 132 (157)
++...++..+++.... ...+|.+.|||+||.+|...+.. .+...-.++.+++|.-.
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRVG 250 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCcc
Confidence 3445566666665432 23589999999999999887754 23322235555555443
No 209
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.58 E-value=0.0076 Score=40.52 Aligned_cols=69 Identities=14% Similarity=0.080 Sum_probs=41.7
Q ss_pred HHHhCCCEEEecCCCCCCCCCCC---C----CCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcC
Q 044507 46 ALASLGYRAVAPDLRGFGDTDAP---P----DVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFR 116 (157)
Q Consensus 46 ~l~~~g~~v~~~d~~g~g~s~~~---~----~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 116 (157)
.+.+. .+|++|-+|-..-.... . ........+.......++++.. +.++++|+|||.|+.+..+++.++
T Consensus 41 ~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 41 AFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 34344 79999988853221111 0 0011223334444445555542 457999999999999999998874
No 210
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=96.58 E-value=0.02 Score=41.28 Aligned_cols=83 Identities=11% Similarity=0.028 Sum_probs=50.1
Q ss_pred CEEEecCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----C-CCCcEEEEEEcHHHHHHHHHHhc----C-----
Q 044507 52 YRAVAPDLR-GFGDTDAPPDVTSYTCFHVIGDLVGLIDTVA----P-NDEKVFVVGHDWGAFMAWFLCLF----R----- 116 (157)
Q Consensus 52 ~~v~~~d~~-g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~----~-~~~~i~l~G~S~Gg~~a~~~~~~----~----- 116 (157)
.+++.+|.| |.|.|-........+-...+.++..+++... . ...+++|.|.|+||..+-.++.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368889987 8888854322121222223355554444322 1 45789999999999877666553 2
Q ss_pred -ccceeEEEEeecccCCCC
Q 044507 117 -PDRVKALVNLSVVFNPFG 134 (157)
Q Consensus 117 -~~~~~~~i~~~~~~~~~~ 134 (157)
+-.++++++-.+..++..
T Consensus 82 ~~inLkGi~IGNg~t~~~~ 100 (319)
T PLN02213 82 PPINLQGYMLGNPVTYMDF 100 (319)
T ss_pred CceeeeEEEeCCCCCCccc
Confidence 124678777777666543
No 211
>PLN02454 triacylglycerol lipase
Probab=96.55 E-value=0.011 Score=43.87 Aligned_cols=20 Identities=25% Similarity=0.405 Sum_probs=17.8
Q ss_pred cEEEEEEcHHHHHHHHHHhc
Q 044507 96 KVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 96 ~i~l~G~S~Gg~~a~~~~~~ 115 (157)
+|++.|||+||.+|...|..
T Consensus 229 sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred eEEEEecCHHHHHHHHHHHH
Confidence 49999999999999988764
No 212
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.44 E-value=0.015 Score=44.79 Aligned_cols=99 Identities=16% Similarity=0.121 Sum_probs=56.8
Q ss_pred EEEEeCCCC---CchhhHHHHHHHHHh-CCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH---HhCCCCCcEE
Q 044507 26 VILFLHGFP---ELWYSWRHQITALAS-LGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLID---TVAPNDEKVF 98 (157)
Q Consensus 26 ~vl~~hG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~i~ 98 (157)
.|+.+||.| .++.+.....+.+++ .|+.++.+|+.=- +........++..-..+=+++ -+....++|+
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLA-----PEaPFPRaleEv~fAYcW~inn~allG~TgEriv 472 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLA-----PEAPFPRALEEVFFAYCWAINNCALLGSTGERIV 472 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccC-----CCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEE
Confidence 688899987 333444444444443 4899999998422 222233334443333333333 2333569999
Q ss_pred EEEEcHHHHHHHHHHhc----CccceeEEEEeecc
Q 044507 99 VVGHDWGAFMAWFLCLF----RPDRVKALVNLSVV 129 (157)
Q Consensus 99 l~G~S~Gg~~a~~~~~~----~~~~~~~~i~~~~~ 129 (157)
++|.|.||.++.-.+.+ .-..-+++++.-++
T Consensus 473 ~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 473 LAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred EeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 99999999876544433 22233577665443
No 213
>PLN02324 triacylglycerol lipase
Probab=96.37 E-value=0.0083 Score=44.42 Aligned_cols=37 Identities=24% Similarity=0.352 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhc
Q 044507 79 VIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
...++..+++.......+|.+.|||+||.+|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3445556665542223479999999999999888753
No 214
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=96.37 E-value=0.025 Score=47.32 Aligned_cols=95 Identities=14% Similarity=0.163 Sum_probs=64.3
Q ss_pred CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEE
Q 044507 23 QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDT-DAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVG 101 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G 101 (157)
+.|+++|+|...|......+++..|. .|.||.. .... +..+++..++....-++.++ ...+..++|
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~la~rle----------~PaYglQ~T~~v--P~dSies~A~~yirqirkvQ-P~GPYrl~G 2188 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALESLASRLE----------IPAYGLQCTEAV--PLDSIESLAAYYIRQIRKVQ-PEGPYRLAG 2188 (2376)
T ss_pred cCCceEEEeccccchHHHHHHHhhcC----------CcchhhhccccC--CcchHHHHHHHHHHHHHhcC-CCCCeeeec
Confidence 56899999999887766666655443 2233321 1111 45667777777777777764 457999999
Q ss_pred EcHHHHHHHHHHhcCc--cceeEEEEeeccc
Q 044507 102 HDWGAFMAWFLCLFRP--DRVKALVNLSVVF 130 (157)
Q Consensus 102 ~S~Gg~~a~~~~~~~~--~~~~~~i~~~~~~ 130 (157)
+|+|+.++..++.... +....+|++++..
T Consensus 2189 YSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2189 YSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred cchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 9999999988877532 2345578877654
No 215
>PLN02934 triacylglycerol lipase
Probab=96.24 E-value=0.018 Score=43.63 Aligned_cols=34 Identities=26% Similarity=0.391 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHh
Q 044507 79 VIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCL 114 (157)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~ 114 (157)
....+.++++.. ...++++.|||+||.+|...+.
T Consensus 307 v~~~lk~ll~~~--p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLKEH--KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHC--CCCeEEEeccccHHHHHHHHHH
Confidence 344455555544 5579999999999999988864
No 216
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.24 E-value=0.021 Score=43.45 Aligned_cols=38 Identities=16% Similarity=0.317 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhCC--CCCcEEEEEEcHHHHHHHHHHhc
Q 044507 78 HVIGDLVGLIDTVAP--NDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 78 ~~~~~l~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
+...++..+++.+.. ...+|.+.|||+||.+|...|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 445566677665532 23479999999999999887754
No 217
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=96.19 E-value=0.11 Score=35.73 Aligned_cols=101 Identities=10% Similarity=-0.009 Sum_probs=61.3
Q ss_pred EEEEeCCCCCc-hhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC-CcEEEEEEc
Q 044507 26 VILFLHGFPEL-WYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPND-EKVFVVGHD 103 (157)
Q Consensus 26 ~vl~~hG~~~~-~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~i~l~G~S 103 (157)
|+|++-||.+. ........+.-.+.|+.++.+-.+......+. ......++.+.+.+....... .++.+..+|
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~~~~~il~H~FS 75 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS-----KRLAPAADKLLELLSDSQSASPPPILFHSFS 75 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec-----cchHHHHHHHHHHhhhhccCCCCCEEEEEEE
Confidence 35566688654 44445666666668999998876532222111 334445555555555543332 389999999
Q ss_pred HHHHHHHHHHhc---------Cc-cceeEEEEeecccC
Q 044507 104 WGAFMAWFLCLF---------RP-DRVKALVNLSVVFN 131 (157)
Q Consensus 104 ~Gg~~a~~~~~~---------~~-~~~~~~i~~~~~~~ 131 (157)
.||...+..... .+ .+++++|+.++|..
T Consensus 76 nGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~ 113 (240)
T PF05705_consen 76 NGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGI 113 (240)
T ss_pred CchHHHHHHHHHHHHhcccccccccccceeEEeCCCCc
Confidence 988777655441 11 23788888877654
No 218
>PLN02802 triacylglycerol lipase
Probab=96.13 E-value=0.013 Score=44.47 Aligned_cols=37 Identities=24% Similarity=0.416 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhc
Q 044507 79 VIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
...++..+++.......+|++.|||+||.+|...+..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 4445556665542223479999999999999877764
No 219
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.91 E-value=0.026 Score=43.64 Aligned_cols=101 Identities=15% Similarity=0.148 Sum_probs=61.1
Q ss_pred CCEEEEeCCCC----Cchhh--HHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-----
Q 044507 24 GPVILFLHGFP----ELWYS--WRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP----- 92 (157)
Q Consensus 24 ~p~vl~~hG~~----~~~~~--~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~----- 92 (157)
.|.++++||.+ ++... |........+. ..+..+|++.-- ...++.+.++.+..+.+....
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gev-vev~tfdl~n~i--------gG~nI~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEV-VEVPTFDLNNPI--------GGANIKHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhcee-eeeccccccCCC--------CCcchHHHHHHHHHHhhhhhhhhhcc
Confidence 47889999987 12222 22222222222 455555654210 124555566666665553221
Q ss_pred -CCCcEEEEEEcHHHHHHHHHHhcCc-cceeEEEEeecccCCC
Q 044507 93 -NDEKVFVVGHDWGAFMAWFLCLFRP-DRVKALVNLSVVFNPF 133 (157)
Q Consensus 93 -~~~~i~l~G~S~Gg~~a~~~~~~~~-~~~~~~i~~~~~~~~~ 133 (157)
...+|+|+|.|||+.++++.+..+. ..++++|+++-+++..
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~v 289 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTV 289 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCC
Confidence 4579999999999988888777654 3489999998776643
No 220
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=95.84 E-value=0.035 Score=29.96 Aligned_cols=37 Identities=19% Similarity=0.403 Sum_probs=19.4
Q ss_pred cceeEEEE-CCEEEEEee---c-------CCCCEEEEeCCCCCchhhH
Q 044507 4 IQHRIVKV-NGINMHIAE---K-------GQGPVILFLHGFPELWYSW 40 (157)
Q Consensus 4 ~~~~~~~~-~g~~~~~~~---~-------~~~p~vl~~hG~~~~~~~~ 40 (157)
.|+..+.. ||.-+...+ . ..+|+|++.||..+++..|
T Consensus 12 ~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 12 CEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp -EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred cEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 45555555 787665431 1 1468999999999998887
No 221
>PLN02761 lipase class 3 family protein
Probab=95.82 E-value=0.022 Score=43.37 Aligned_cols=36 Identities=22% Similarity=0.385 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhC----CCCCcEEEEEEcHHHHHHHHHHh
Q 044507 79 VIGDLVGLIDTVA----PNDEKVFVVGHDWGAFMAWFLCL 114 (157)
Q Consensus 79 ~~~~l~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~~~ 114 (157)
...++..+++... ....+|.+.|||+||.+|...+.
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 4445555555442 12347999999999999988775
No 222
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.69 E-value=0.019 Score=42.17 Aligned_cols=83 Identities=16% Similarity=0.187 Sum_probs=47.7
Q ss_pred EEEEeCCCCC-chhhHHHHHHHHHhC--CCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 044507 26 VILFLHGFPE-LWYSWRHQITALASL--GYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGH 102 (157)
Q Consensus 26 ~vl~~hG~~~-~~~~~~~~~~~l~~~--g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~ 102 (157)
.+++.||..+ +...|...+....+. +..++.-...+.-.... +.-..--...++++++.+... ..++|..+||
T Consensus 82 LvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~--~Gv~~lG~Rla~~~~e~~~~~--si~kISfvgh 157 (405)
T KOG4372|consen 82 LVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTF--DGVDVLGERLAEEVKETLYDY--SIEKISFVGH 157 (405)
T ss_pred EEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhcc--ccceeeecccHHHHhhhhhcc--ccceeeeeee
Confidence 8999999987 667777767666655 33333333322211111 101111223444555555544 4689999999
Q ss_pred cHHHHHHHHH
Q 044507 103 DWGAFMAWFL 112 (157)
Q Consensus 103 S~Gg~~a~~~ 112 (157)
|.||.++...
T Consensus 158 SLGGLvar~A 167 (405)
T KOG4372|consen 158 SLGGLVARYA 167 (405)
T ss_pred ecCCeeeeEE
Confidence 9999876543
No 223
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.68 E-value=0.1 Score=39.52 Aligned_cols=108 Identities=16% Similarity=0.196 Sum_probs=65.0
Q ss_pred EeecCC--CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEe-cCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 044507 18 IAEKGQ--GPVILFLHGFPELWYSWRHQITALASLGYRAVA-PDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPND 94 (157)
Q Consensus 18 ~~~~~~--~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~-~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 94 (157)
|-.+|+ .|..|++.|+-. .+.+..+. .+...|...++ -|+|--|.+...-. ..+ .....+-+.+.++.+.-+.
T Consensus 281 YFnPGD~KPPL~VYFSGyR~-aEGFEgy~-MMk~Lg~PfLL~~DpRleGGaFYlGs-~ey-E~~I~~~I~~~L~~LgF~~ 356 (511)
T TIGR03712 281 YFNPGDFKPPLNVYFSGYRP-AEGFEGYF-MMKRLGAPFLLIGDPRLEGGAFYLGS-DEY-EQGIINVIQEKLDYLGFDH 356 (511)
T ss_pred ecCCcCCCCCeEEeeccCcc-cCcchhHH-HHHhcCCCeEEeeccccccceeeeCc-HHH-HHHHHHHHHHHHHHhCCCH
Confidence 334443 357788888865 44443321 33444555544 47776666643221 111 2334555667777776567
Q ss_pred CcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 95 EKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 95 ~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
+.+++-|-|||..-|+.+++... -.++|+--|..+
T Consensus 357 ~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~N 391 (511)
T TIGR03712 357 DQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVN 391 (511)
T ss_pred HHeeeccccccchhhhhhcccCC--CceEEEcCcccc
Confidence 89999999999999999988742 235555545433
No 224
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=95.57 E-value=0.18 Score=35.65 Aligned_cols=90 Identities=14% Similarity=0.216 Sum_probs=48.7
Q ss_pred CEEEEeCCCCCchh------hHHHHHHHH-HhCCCEEEecCCCCCCCC--------CCC-----CCCCCCCHHHHHHHHH
Q 044507 25 PVILFLHGFPELWY------SWRHQITAL-ASLGYRAVAPDLRGFGDT--------DAP-----PDVTSYTCFHVIGDLV 84 (157)
Q Consensus 25 p~vl~~hG~~~~~~------~~~~~~~~l-~~~g~~v~~~d~~g~g~s--------~~~-----~~~~~~~~~~~~~~l~ 84 (157)
..||++-|.+.+.. +-..+.+.+ ...+-..+.+-.+|.|.. ... ........++.+.+..
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 36788888864422 234445555 222324444555666661 110 0111233344333333
Q ss_pred HHH-HHhCCCCCcEEEEEEcHHHHHHHHHHhc
Q 044507 85 GLI-DTVAPNDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 85 ~~~-~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
..+ +.. ....+|.++|+|.|+..|..++..
T Consensus 82 ~~l~~~~-~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 82 RFLSKNY-EPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHhcc-CCcceEEEEecCccHHHHHHHHHH
Confidence 333 333 356789999999999999888764
No 225
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=95.56 E-value=0.059 Score=39.21 Aligned_cols=53 Identities=17% Similarity=0.147 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhc----Cc--cceeEEEEeecccC
Q 044507 77 FHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLF----RP--DRVKALVNLSVVFN 131 (157)
Q Consensus 77 ~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~----~~--~~~~~~i~~~~~~~ 131 (157)
....+++..+++.. ..-++.+.|||+||.+|...+.. .. ...-+++..+.|..
T Consensus 155 ~~~~~~~~~L~~~~--~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PRv 213 (336)
T KOG4569|consen 155 SGLDAELRRLIELY--PNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPRV 213 (336)
T ss_pred HHHHHHHHHHHHhc--CCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCc
Confidence 44556666666666 56899999999999999887764 21 12335566555443
No 226
>PLN02753 triacylglycerol lipase
Probab=95.50 E-value=0.034 Score=42.43 Aligned_cols=37 Identities=19% Similarity=0.342 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhCC---CCCcEEEEEEcHHHHHHHHHHhc
Q 044507 79 VIGDLVGLIDTVAP---NDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 79 ~~~~l~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
....+..+++.... ...+|.+.|||+||.+|...|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34445555554422 13689999999999999888753
No 227
>PLN02719 triacylglycerol lipase
Probab=95.24 E-value=0.044 Score=41.69 Aligned_cols=37 Identities=19% Similarity=0.327 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhCC---CCCcEEEEEEcHHHHHHHHHHhc
Q 044507 79 VIGDLVGLIDTVAP---NDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 79 ~~~~l~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
...++..+++.... ...+|.+.|||+||.+|...|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 44455555554421 12489999999999999887753
No 228
>PLN02847 triacylglycerol lipase
Probab=94.70 E-value=0.078 Score=41.19 Aligned_cols=23 Identities=35% Similarity=0.413 Sum_probs=19.4
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhc
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
..-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 45699999999999999877664
No 229
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=94.29 E-value=1.4 Score=31.64 Aligned_cols=127 Identities=12% Similarity=0.138 Sum_probs=81.8
Q ss_pred ccceeEEEECCEEEEEeec-------------------C--CCCEEEEeCCCCCchh-hHHHHHHHHHhCCCEEEecCCC
Q 044507 3 GIQHRIVKVNGINMHIAEK-------------------G--QGPVILFLHGFPELWY-SWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 3 ~~~~~~~~~~g~~~~~~~~-------------------~--~~p~vl~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
++....+.+||..+..... . ..|.|+++-...|... -.+...+.|... ..|+..|+-
T Consensus 61 efni~~t~v~~~~v~v~e~~vw~kPfc~Lv~F~r~~~~~r~pdPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~ 139 (415)
T COG4553 61 EFNIDSTRVDGKDVPVREQTVWEKPFCRLVHFERDMPDARKPDPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWV 139 (415)
T ss_pred ccCCcceeECCEeeeecceeEeccchhhhhhhhhccccccCCCCeEEEEecccccHHHHHHHHHHHhccc-cceeEeecc
Confidence 3445667778877654321 1 2357777777766533 346666677665 677777764
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHH-----HHHHHHHhcCccceeEEEEeecccCCCCC
Q 044507 61 GFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGA-----FMAWFLCLFRPDRVKALVNLSVVFNPFGS 135 (157)
Q Consensus 61 g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg-----~~a~~~~~~~~~~~~~~i~~~~~~~~~~~ 135 (157)
--..- +.....+++.+.++.+.+++..+.. .+++++-+.=+ .++++-+...|..-..+++++++.+....
T Consensus 140 dAr~V--p~~~G~FdldDYIdyvie~~~~~Gp---~~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~n 214 (415)
T COG4553 140 DARMV--PLEAGHFDLDDYIDYVIEMINFLGP---DAHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARKN 214 (415)
T ss_pred cccee--ecccCCccHHHHHHHHHHHHHHhCC---CCcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccccC
Confidence 22211 1223568899999999999999943 36666666543 44455555677778899999999886544
No 230
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=94.24 E-value=0.08 Score=40.16 Aligned_cols=105 Identities=18% Similarity=0.106 Sum_probs=60.9
Q ss_pred CEEEEeCCCCC---ch--hhHHHHHHHHHhC-CCEEEecCCCC--C------CCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 044507 25 PVILFLHGFPE---LW--YSWRHQITALASL-GYRAVAPDLRG--F------GDTDAPPDVTSYTCFHVIGDLVGLIDTV 90 (157)
Q Consensus 25 p~vl~~hG~~~---~~--~~~~~~~~~l~~~-g~~v~~~d~~g--~------g~s~~~~~~~~~~~~~~~~~l~~~~~~~ 90 (157)
.++|++-|.|- ++ .-|. .+.|+.. ...|+.+++|= + |..+.+-++...+..-....+.+-+...
T Consensus 136 tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aF 213 (601)
T KOG4389|consen 136 TVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAF 213 (601)
T ss_pred eEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHh
Confidence 46777887652 21 1232 2233333 46777778762 1 2222233444455555667788888888
Q ss_pred CCCCCcEEEEEEcHHHHHHH-HHHhc-CccceeEEEEeecccC
Q 044507 91 APNDEKVFVVGHDWGAFMAW-FLCLF-RPDRVKALVNLSVVFN 131 (157)
Q Consensus 91 ~~~~~~i~l~G~S~Gg~~a~-~~~~~-~~~~~~~~i~~~~~~~ 131 (157)
..+++++.++|.|.|+..+. .+..- ....++..|+=++.++
T Consensus 214 GGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 214 GGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred CCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCC
Confidence 77889999999999986543 22221 1124666666665554
No 231
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.99 E-value=0.2 Score=38.94 Aligned_cols=51 Identities=25% Similarity=0.464 Sum_probs=33.6
Q ss_pred HHHHHHHHHhCC-CCCcEEEEEEcHHHHHHHHHHhc-----Ccc------ceeEEEEeecccC
Q 044507 81 GDLVGLIDTVAP-NDEKVFVVGHDWGAFMAWFLCLF-----RPD------RVKALVNLSVVFN 131 (157)
Q Consensus 81 ~~l~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~-----~~~------~~~~~i~~~~~~~ 131 (157)
..+.+.+..... +..+|.-+||||||.++-.++.+ .|+ ...+++.++.|..
T Consensus 511 ~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHr 573 (697)
T KOG2029|consen 511 NELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHR 573 (697)
T ss_pred HHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCC
Confidence 344444444333 36899999999999888666554 232 2467888887755
No 232
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.94 E-value=0.13 Score=39.35 Aligned_cols=84 Identities=12% Similarity=0.112 Sum_probs=56.3
Q ss_pred HHHhCCCEEEecCCCCCCCCCC--CCCCCCCCHH-----------HHHHHHHHHHHHhCC-CCCcEEEEEEcHHHHHHHH
Q 044507 46 ALASLGYRAVAPDLRGFGDTDA--PPDVTSYTCF-----------HVIGDLVGLIDTVAP-NDEKVFVVGHDWGAFMAWF 111 (157)
Q Consensus 46 ~l~~~g~~v~~~d~~g~g~s~~--~~~~~~~~~~-----------~~~~~l~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~ 111 (157)
....+||.++.-|- ||..+.. ... ...+.+ +...--.++++..+. .+++-+..|-|.||..++.
T Consensus 54 ~~~~~G~A~~~TD~-Gh~~~~~~~~~~-~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~ 131 (474)
T PF07519_consen 54 TALARGYATASTDS-GHQGSAGSDDAS-FGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLM 131 (474)
T ss_pred hhhhcCeEEEEecC-CCCCCccccccc-ccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHH
Confidence 33456899999996 3433221 111 112222 122223344444443 5688999999999999999
Q ss_pred HHhcCccceeEEEEeecccC
Q 044507 112 LCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 112 ~~~~~~~~~~~~i~~~~~~~ 131 (157)
.+.++|+.+++|+.-+|+.+
T Consensus 132 ~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 132 AAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHhChhhcCeEEeCCchHH
Confidence 99999999999999998876
No 233
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.41 E-value=0.39 Score=36.82 Aligned_cols=51 Identities=14% Similarity=0.116 Sum_probs=36.7
Q ss_pred HHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhc-----CccceeEEEEeecccCC
Q 044507 82 DLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLF-----RPDRVKALVNLSVVFNP 132 (157)
Q Consensus 82 ~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~-----~~~~~~~~i~~~~~~~~ 132 (157)
.+.+.+..-.++.+||.++|+|.|+.+...++.. .-+.|..++++++|...
T Consensus 434 lLAe~L~~r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 434 LLAEALCKRSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred HHHHHHHHhccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 4445555544578999999999999988755542 22458899999987753
No 234
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=91.91 E-value=2.1 Score=31.09 Aligned_cols=91 Identities=14% Similarity=0.076 Sum_probs=52.2
Q ss_pred CEEEEeCCCCC-----chhhHHHHHHHHHh-CCCEEEecCCCCCCCCCCC----------CC----CCCCCHHHHHHHHH
Q 044507 25 PVILFLHGFPE-----LWYSWRHQITALAS-LGYRAVAPDLRGFGDTDAP----------PD----VTSYTCFHVIGDLV 84 (157)
Q Consensus 25 p~vl~~hG~~~-----~~~~~~~~~~~l~~-~g~~v~~~d~~g~g~s~~~----------~~----~~~~~~~~~~~~l~ 84 (157)
..|+.+.|... ...+...+.+.|.. .+..++++--+|.|.-.-. .. +....+.+.+...-
T Consensus 32 ~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AY 111 (423)
T COG3673 32 RLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAY 111 (423)
T ss_pred eEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Confidence 36667777642 22445555666665 5778888877888765211 00 11122222222222
Q ss_pred HHHHHhCCCCCcEEEEEEcHHHHHHHHHHhc
Q 044507 85 GLIDTVAPNDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 85 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
.++-........|+++|+|.|+..+..+|..
T Consensus 112 rFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 112 RFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 2222223356899999999999999877663
No 235
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.41 E-value=0.66 Score=30.12 Aligned_cols=75 Identities=13% Similarity=0.138 Sum_probs=47.5
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHH
Q 044507 26 VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWG 105 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~G 105 (157)
.||++-|++..+.....++ +.+..-.++++|++...-. .+. . .-+.+.++++|||
T Consensus 13 LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~ld--------fDf-----------s----Ay~hirlvAwSMG 67 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLNLD--------FDF-----------S----AYRHIRLVAWSMG 67 (214)
T ss_pred EEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcCcc--------cch-----------h----hhhhhhhhhhhHH
Confidence 7888889988776665543 3333235688888632211 110 1 2257889999999
Q ss_pred HHHHHHHHhcCccceeEEEEee
Q 044507 106 AFMAWFLCLFRPDRVKALVNLS 127 (157)
Q Consensus 106 g~~a~~~~~~~~~~~~~~i~~~ 127 (157)
-.+|-+.+...+ ++..+.+.
T Consensus 68 VwvAeR~lqg~~--lksatAiN 87 (214)
T COG2830 68 VWVAERVLQGIR--LKSATAIN 87 (214)
T ss_pred HHHHHHHHhhcc--ccceeeec
Confidence 999998888765 44444443
No 236
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=90.89 E-value=4 Score=29.77 Aligned_cols=110 Identities=17% Similarity=0.126 Sum_probs=71.3
Q ss_pred CCCEEEEeCCCCCc-hhh---HHHH-----------HHHHHhCCCEEEecCCC-CCCCCCCCC-CCCCCCHHHHHHHHHH
Q 044507 23 QGPVILFLHGFPEL-WYS---WRHQ-----------ITALASLGYRAVAPDLR-GFGDTDAPP-DVTSYTCFHVIGDLVG 85 (157)
Q Consensus 23 ~~p~vl~~hG~~~~-~~~---~~~~-----------~~~l~~~g~~v~~~d~~-g~g~s~~~~-~~~~~~~~~~~~~l~~ 85 (157)
..|..+.+.|.++. ... |.++ ...|.. ..++.+|.| |.|.|--.. .....+..+.+.|+.+
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ 107 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVE 107 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHHHH
Confidence 45788889988643 222 2221 122332 467777765 667663221 2345677888999999
Q ss_pred HHHHhCC-----CCCcEEEEEEcHHHHHHHHHHhcCc---------cceeEEEEeecccCCCC
Q 044507 86 LIDTVAP-----NDEKVFVVGHDWGAFMAWFLCLFRP---------DRVKALVNLSVVFNPFG 134 (157)
Q Consensus 86 ~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~~~~~~---------~~~~~~i~~~~~~~~~~ 134 (157)
+++.+.. ...+.+|+..|+||-++..++.... ..+.++++-++..+|..
T Consensus 108 llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~D 170 (414)
T KOG1283|consen 108 LLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPED 170 (414)
T ss_pred HHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChhH
Confidence 9987654 3468999999999999988877532 23567777776666543
No 237
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=90.30 E-value=0.56 Score=33.38 Aligned_cols=35 Identities=23% Similarity=0.485 Sum_probs=25.7
Q ss_pred HHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCc
Q 044507 82 DLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 82 ~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~ 117 (157)
++...++++. ...++.+.|||.||.+|..+...+.
T Consensus 264 dI~~~v~~~Y-pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 264 DILGAVRRIY-PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHhC-CCceEEEeccccchHHHHHhccccC
Confidence 3444444443 4579999999999999998877664
No 238
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=90.30 E-value=0.56 Score=33.38 Aligned_cols=35 Identities=23% Similarity=0.485 Sum_probs=25.7
Q ss_pred HHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCc
Q 044507 82 DLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 82 ~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~ 117 (157)
++...++++. ...++.+.|||.||.+|..+...+.
T Consensus 264 dI~~~v~~~Y-pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 264 DILGAVRRIY-PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHhC-CCceEEEeccccchHHHHHhccccC
Confidence 3444444443 4579999999999999998877664
No 239
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.00 E-value=0.28 Score=34.48 Aligned_cols=99 Identities=12% Similarity=0.040 Sum_probs=57.3
Q ss_pred CCEEEEeCCCCCchhhHH-HHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHH---H-------HHHHHHHHHHHhC-
Q 044507 24 GPVILFLHGFPELWYSWR-HQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCF---H-------VIGDLVGLIDTVA- 91 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~-~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~---~-------~~~~l~~~~~~~~- 91 (157)
+|.-+++.|.+...-.-+ -+.+.+.+++...++++-|-+|...+... ....++ + .+++...++.+-.
T Consensus 113 ~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q-~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~ 191 (371)
T KOG1551|consen 113 ADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQ-IIHMLEYVTDLFKMGRATIQEFVKLFTWSSA 191 (371)
T ss_pred CCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHH-HHHHHHHHHHHHHhhHHHHHHHHHhcccccc
Confidence 355666655544322222 34566777888899999998998765431 000111 1 1112222222110
Q ss_pred CCCCcEEEEEEcHHHHHHHHHHhcCccceeEE
Q 044507 92 PNDEKVFVVGHDWGAFMAWFLCLFRPDRVKAL 123 (157)
Q Consensus 92 ~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~ 123 (157)
.+..+..++|-||||.+|-.....++.-++.+
T Consensus 192 ~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~ 223 (371)
T KOG1551|consen 192 DGLGNLNLVGRSMGGDIANQVGSLHQKPVATA 223 (371)
T ss_pred cCcccceeeeeecccHHHHhhcccCCCCcccc
Confidence 14579999999999999999888776555444
No 240
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.94 E-value=4.3 Score=29.91 Aligned_cols=85 Identities=9% Similarity=-0.023 Sum_probs=52.8
Q ss_pred EEEEeCCCCCchhh-HHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcH
Q 044507 26 VILFLHGFPELWYS-WRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDW 104 (157)
Q Consensus 26 ~vl~~hG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~ 104 (157)
+|+++=||.+..+. .........+.|+.++.+-.|-.-....... ...+.......+.+++.....+..+++..-+|+
T Consensus 40 ~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~-~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS~ 118 (350)
T KOG2521|consen 40 PIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASR-RILSLSLASTRLSELLSDYNSDPCPIIFHVFSG 118 (350)
T ss_pred cEEEEeeeccccchhHHHHHHHHhcCCceEEEecCccccccccccc-ccchhhHHHHHHHHHhhhccCCcCceEEEEecC
Confidence 45555566554444 4556666777899998888775544333221 233344445566666666544677899999999
Q ss_pred HHHHHHH
Q 044507 105 GAFMAWF 111 (157)
Q Consensus 105 Gg~~a~~ 111 (157)
||...+.
T Consensus 119 ng~~~~~ 125 (350)
T KOG2521|consen 119 NGVRLMY 125 (350)
T ss_pred CceeehH
Confidence 9966543
No 241
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=89.51 E-value=3 Score=24.76 Aligned_cols=83 Identities=16% Similarity=0.095 Sum_probs=49.0
Q ss_pred HHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHH--HHHHHHhcCc
Q 044507 40 WRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAF--MAWFLCLFRP 117 (157)
Q Consensus 40 ~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~--~a~~~~~~~~ 117 (157)
|..+.+.+..+|+..=.+.++.+|.+....- .....+.-...+..+++.. ...+.+++|.|--.- +-..++.++|
T Consensus 13 y~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~-~~~~~~~K~~~i~~i~~~f--P~~kfiLIGDsgq~DpeiY~~ia~~~P 89 (100)
T PF09949_consen 13 YPFLRDFLRRNGFPAGPLLLRDYGPSLSGLF-KSGAEEHKRDNIERILRDF--PERKFILIGDSGQHDPEIYAEIARRFP 89 (100)
T ss_pred HHHHHHHHHhcCCCCCceEcccCCccccccc-cCCchhHHHHHHHHHHHHC--CCCcEEEEeeCCCcCHHHHHHHHHHCC
Confidence 3444555556666554455555544322110 0111123455677777776 678999999996553 3356677899
Q ss_pred cceeEEEE
Q 044507 118 DRVKALVN 125 (157)
Q Consensus 118 ~~~~~~i~ 125 (157)
+++.++..
T Consensus 90 ~~i~ai~I 97 (100)
T PF09949_consen 90 GRILAIYI 97 (100)
T ss_pred CCEEEEEE
Confidence 99998754
No 242
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=88.95 E-value=5.1 Score=26.66 Aligned_cols=39 Identities=21% Similarity=0.194 Sum_probs=31.4
Q ss_pred CCCCEEEEeCCCCCchhhH--HHHHHHHHhCCCEEEecCCC
Q 044507 22 GQGPVILFLHGFPELWYSW--RHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 22 ~~~p~vl~~hG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~ 60 (157)
+.+|.+|++.|..|+..+- ..+.+.|.+.|+.++..|--
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGD 60 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGD 60 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecCh
Confidence 3567899999998876554 55678888999999999864
No 243
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=85.08 E-value=2.1 Score=26.63 Aligned_cols=30 Identities=23% Similarity=0.365 Sum_probs=23.2
Q ss_pred CCCCEEEEeCCCCCchhhH--HHHHHHHHhCC
Q 044507 22 GQGPVILFLHGFPELWYSW--RHQITALASLG 51 (157)
Q Consensus 22 ~~~p~vl~~hG~~~~~~~~--~~~~~~l~~~g 51 (157)
.++|.|+-+||+.|...+| +-+++.|-+.|
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 4678899999999998888 44566766665
No 244
>PRK12467 peptide synthase; Provisional
Probab=83.04 E-value=20 Score=35.32 Aligned_cols=96 Identities=10% Similarity=0.026 Sum_probs=62.8
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcH
Q 044507 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDW 104 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~ 104 (157)
+.++..|...+....+.++...+... ..++.+..++.-.... ...+....+....+.+.+.. ...+..+.|+|+
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~~-~~~~~l~~~~~~~d~~----~~~~~~~~~~~y~~~~~~~~-~~~p~~l~g~s~ 3766 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEGD-RHVLGLTCRHLLDDGW----QDTSLQAMAVQYADYILWQQ-AKGPYGLLGWSL 3766 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCCC-CcEEEEeccccccccC----CccchHHHHHHHHHHHHHhc-cCCCeeeeeeec
Confidence 46999999888877787877777654 5666666544321111 23345556666777776653 346799999999
Q ss_pred HHHHHHHHHhc---CccceeEEEEe
Q 044507 105 GAFMAWFLCLF---RPDRVKALVNL 126 (157)
Q Consensus 105 Gg~~a~~~~~~---~~~~~~~~i~~ 126 (157)
||.++..++.. ..+.+.-+.++
T Consensus 3767 g~~~a~~~~~~l~~~g~~~~~~~~~ 3791 (3956)
T PRK12467 3767 GGTLARLVAELLEREGESEAFLGLF 3791 (3956)
T ss_pred chHHHHHHHHHHHHcCCceeEEEEE
Confidence 99999877664 34445544444
No 245
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=81.88 E-value=15 Score=27.45 Aligned_cols=84 Identities=17% Similarity=0.129 Sum_probs=55.8
Q ss_pred EEEEeCCCCC-------chhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEE
Q 044507 26 VILFLHGFPE-------LWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVF 98 (157)
Q Consensus 26 ~vl~~hG~~~-------~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~ 98 (157)
.||++||..- +..+|..+++.+.+++ .+..+|.-..|..+ .+++.+..++.++... +-.
T Consensus 173 ~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AYQGF~~--------GleeDa~~lR~~a~~~-----~~~ 238 (396)
T COG1448 173 SVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAYQGFAD--------GLEEDAYALRLFAEVG-----PEL 238 (396)
T ss_pred CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-Ceeeeehhhhhhcc--------chHHHHHHHHHHHHhC-----CcE
Confidence 7999998743 4568999999999986 44455654444332 1445566676666553 338
Q ss_pred EEEEcHHHHHHHHHHhcCccceeEEEEeec
Q 044507 99 VVGHDWGAFMAWFLCLFRPDRVKALVNLSV 128 (157)
Q Consensus 99 l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~ 128 (157)
++..|+.-.+. .|.+++.++.+++.
T Consensus 239 lva~S~SKnfg-----LYgERVGa~~vva~ 263 (396)
T COG1448 239 LVASSFSKNFG-----LYGERVGALSVVAE 263 (396)
T ss_pred EEEehhhhhhh-----hhhhccceeEEEeC
Confidence 88888865543 46788888888753
No 246
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=79.86 E-value=24 Score=26.70 Aligned_cols=99 Identities=13% Similarity=0.108 Sum_probs=59.0
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCC--------CC-------------CCHHHHHHHH
Q 044507 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDV--------TS-------------YTCFHVIGDL 83 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~--------~~-------------~~~~~~~~~l 83 (157)
|+|+++--+-.-...+..+.+.+.+.|..++.+|.--.+......+. .. ..++...+.+
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 45555533444455677778888889999999997555443322110 00 1111122233
Q ss_pred HHHHHHhCC--CCCcEEEEEEcHHHHHHHHHHhcCccceeEE
Q 044507 84 VGLIDTVAP--NDEKVFVVGHDWGAFMAWFLCLFRPDRVKAL 123 (157)
Q Consensus 84 ~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~ 123 (157)
..++..+.. ...-++-+|-|.|..++.......|--+-++
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKl 123 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKL 123 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeE
Confidence 344444432 3467899999999999998888777544443
No 247
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=78.59 E-value=6.3 Score=25.54 Aligned_cols=48 Identities=8% Similarity=0.050 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccceeEEE
Q 044507 77 FHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDRVKALV 124 (157)
Q Consensus 77 ~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i 124 (157)
++..+.+.++++.+.....+|.+.|.|..|..-+.++...++.+..++
T Consensus 51 ~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vv 98 (160)
T PF08484_consen 51 EQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVV 98 (160)
T ss_dssp HHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EE
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEE
Confidence 344455666666655566889999999999888888776555455443
No 248
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=76.39 E-value=6.4 Score=25.44 Aligned_cols=37 Identities=16% Similarity=0.111 Sum_probs=27.4
Q ss_pred CCEEEEeCCCCCchhhH--HHHHHHHHhCCCEEEecCCC
Q 044507 24 GPVILFLHGFPELWYSW--RHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~ 60 (157)
+|.+|++.|..++...- ..+.+.|.+.|+.++.+|..
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 36899999998876553 55677888889999999853
No 249
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=76.23 E-value=12 Score=28.93 Aligned_cols=86 Identities=17% Similarity=0.194 Sum_probs=51.8
Q ss_pred EeCCCCCchhhH-HHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHH
Q 044507 29 FLHGFPELWYSW-RHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAF 107 (157)
Q Consensus 29 ~~hG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~ 107 (157)
|--|++.+.... ..-+++...+||.|+++|-.|......+ ....+..+++.- .+..|..+|.-.=|.
T Consensus 443 fekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~~~~----------lm~~l~k~~~~~--~pd~i~~vgealvg~ 510 (587)
T KOG0781|consen 443 FEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHNNAP----------LMTSLAKLIKVN--KPDLILFVGEALVGN 510 (587)
T ss_pred HhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccCChh----------HHHHHHHHHhcC--CCceEEEehhhhhCc
Confidence 334666554433 3335566677999999998776555332 344566666655 567788888776666
Q ss_pred HHHHHHhc---------CccceeEEEEe
Q 044507 108 MAWFLCLF---------RPDRVKALVNL 126 (157)
Q Consensus 108 ~a~~~~~~---------~~~~~~~~i~~ 126 (157)
-++.-+.+ .|..++++++-
T Consensus 511 dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 511 DSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred HHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 55544332 34456676653
No 250
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=75.68 E-value=5.1 Score=28.35 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=27.0
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCCCEEEecC
Q 044507 26 VILFLHGFPELWYSWRHQITALASLGYRAVAPD 58 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 58 (157)
.||++|....+......++..|.++||.++.++
T Consensus 232 ~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 678899776666677888999999999998774
No 251
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=74.32 E-value=13 Score=20.96 Aligned_cols=41 Identities=15% Similarity=0.134 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHhC--CCCCcEEEEEEcHHHHHHHHHHhcCc
Q 044507 77 FHVIGDLVGLIDTVA--PNDEKVFVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 77 ~~~~~~l~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~ 117 (157)
.+.+++..+.++... .+++++.++|-|-|=.+|.+.+..+.
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhc
Confidence 333444444444322 25689999999999999988777653
No 252
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=74.12 E-value=4 Score=26.99 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=24.2
Q ss_pred EEEEeCCC---CCchhhHHHHHHHHHhCCCEEEecC
Q 044507 26 VILFLHGF---PELWYSWRHQITALASLGYRAVAPD 58 (157)
Q Consensus 26 ~vl~~hG~---~~~~~~~~~~~~~l~~~g~~v~~~d 58 (157)
.||++|.. ..+......+++.|.++||.++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 58889942 2334556778899999999998764
No 253
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=72.15 E-value=21 Score=24.78 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=26.9
Q ss_pred CCCEEEEeCCCC--CchhhH-HHHHHHHHhCCCEEEecCCC
Q 044507 23 QGPVILFLHGFP--ELWYSW-RHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 23 ~~p~vl~~hG~~--~~~~~~-~~~~~~l~~~g~~v~~~d~~ 60 (157)
.+|.|+|++-.. .+...| ..+.+.+.+.|+.+..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 467899999766 444454 44566777789998877764
No 254
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=71.99 E-value=8.5 Score=25.69 Aligned_cols=42 Identities=21% Similarity=0.149 Sum_probs=28.9
Q ss_pred CCCEEEEeCCCCCc---hhhHHHHHHHHHhCCCEEEecCCCCCCC
Q 044507 23 QGPVILFLHGFPEL---WYSWRHQITALASLGYRAVAPDLRGFGD 64 (157)
Q Consensus 23 ~~p~vl~~hG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~g~g~ 64 (157)
..+|++++||.... ..+-..+.+.|.+.|..+...-+++.|.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH 187 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH 187 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC
Confidence 35899999998654 3444667888888887776666665444
No 255
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=71.64 E-value=7.1 Score=26.73 Aligned_cols=33 Identities=27% Similarity=0.325 Sum_probs=26.0
Q ss_pred EEEEeCCC-CCchhhHHHHHHHHHhCCCEEEecC
Q 044507 26 VILFLHGF-PELWYSWRHQITALASLGYRAVAPD 58 (157)
Q Consensus 26 ~vl~~hG~-~~~~~~~~~~~~~l~~~g~~v~~~d 58 (157)
.||++|.. ..+......+++.|.++||.++.++
T Consensus 188 ~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 188 AILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 68888975 3455567888999999999998775
No 256
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=69.28 E-value=19 Score=24.66 Aligned_cols=37 Identities=22% Similarity=0.180 Sum_probs=27.7
Q ss_pred CCCEEEEeCCCCCchhh--H-HHHHHHHHhCCCEEEecCC
Q 044507 23 QGPVILFLHGFPELWYS--W-RHQITALASLGYRAVAPDL 59 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~--~-~~~~~~l~~~g~~v~~~d~ 59 (157)
..+.|.|++-.+.+... | ....+.|.+.|+.+.-++.
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 35799999988766554 4 5566778888998887776
No 257
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=68.65 E-value=14 Score=25.56 Aligned_cols=37 Identities=35% Similarity=0.451 Sum_probs=29.1
Q ss_pred CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCC
Q 044507 23 QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (157)
.-|.+++.||++............+.+.++.+...+.
T Consensus 48 ~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 84 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDA 84 (299)
T ss_pred cCceEEeccCccccccCcchHHHHhhhceeEEeeecc
Confidence 3478999999998877765577788888888777765
No 258
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=67.25 E-value=14 Score=29.57 Aligned_cols=42 Identities=17% Similarity=0.111 Sum_probs=31.5
Q ss_pred CCEEEEeCCCCCc---hhhHHHHHHHHHhCCCEEEecCCCCCCCC
Q 044507 24 GPVILFLHGFPEL---WYSWRHQITALASLGYRAVAPDLRGFGDT 65 (157)
Q Consensus 24 ~p~vl~~hG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~g~g~s 65 (157)
+.+++++||.... ..+...+.+.|..+|..+-..-+|+-+.+
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHG 595 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcC
Confidence 3689999998754 44556778889989988888777765444
No 259
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=67.07 E-value=53 Score=24.87 Aligned_cols=75 Identities=11% Similarity=0.101 Sum_probs=41.3
Q ss_pred CEEEEeCCCCC---chhhHHHHHHHHHhCCCEEEecCCCC--CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEE
Q 044507 25 PVILFLHGFPE---LWYSWRHQITALASLGYRAVAPDLRG--FGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFV 99 (157)
Q Consensus 25 p~vl~~hG~~~---~~~~~~~~~~~l~~~g~~v~~~d~~g--~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l 99 (157)
.++++++-... ...-...-...|.+.|+.++-|..-- +|+.. .....+.++....+...+....-...++.+
T Consensus 117 ~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~~g~la~~~~g---~gr~~~~~~I~~~~~~~~~~~~l~gk~vlI 193 (399)
T PRK05579 117 APVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPASGRLACGDVG---PGRMAEPEEIVAAAERALSPKDLAGKRVLI 193 (399)
T ss_pred CCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCCCccccCCCcC---CCCCCCHHHHHHHHHHHhhhcccCCCEEEE
Confidence 45666664432 22334555678888899988776421 12211 113456666666666665431114567778
Q ss_pred EEE
Q 044507 100 VGH 102 (157)
Q Consensus 100 ~G~ 102 (157)
.|-
T Consensus 194 TgG 196 (399)
T PRK05579 194 TAG 196 (399)
T ss_pred eCC
Confidence 777
No 260
>PF03283 PAE: Pectinacetylesterase
Probab=63.73 E-value=44 Score=24.90 Aligned_cols=22 Identities=23% Similarity=0.280 Sum_probs=17.8
Q ss_pred CCCcEEEEEEcHHHHHHHHHHh
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCL 114 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~ 114 (157)
+.+++++.|.|.||.-++..+.
T Consensus 154 ~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 154 NAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred ccceEEEeccChHHHHHHHHHH
Confidence 4689999999999988865544
No 261
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=60.47 E-value=56 Score=24.93 Aligned_cols=101 Identities=16% Similarity=0.122 Sum_probs=58.6
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCC-CCCCC---CHHHHHHHHHHHHHHhCCCCCcEEEEE
Q 044507 26 VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPP-DVTSY---TCFHVIGDLVGLIDTVAPNDEKVFVVG 101 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~-~~~~~---~~~~~~~~l~~~~~~~~~~~~~i~l~G 101 (157)
+++++--..+....-.+..+.+.+.+..++..|..++-...... +...+ +++.+.+++......- ....-++.|
T Consensus 50 ~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g--~yr~PVl~g 127 (456)
T COG3946 50 LVILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLG--VYRLPVLTG 127 (456)
T ss_pred eeEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhcc--CcccceEee
Confidence 55555554454445555677888888999999987663322211 11222 2333333222222111 335677888
Q ss_pred EcHHHHHHHHHHhcCcc-ceeEEEEeec
Q 044507 102 HDWGAFMAWFLCLFRPD-RVKALVNLSV 128 (157)
Q Consensus 102 ~S~Gg~~a~~~~~~~~~-~~~~~i~~~~ 128 (157)
--.||.++...+..-|. ++.+.+.+.+
T Consensus 128 ~g~Gg~~A~asaaqSp~atlag~Vsldp 155 (456)
T COG3946 128 PGQGGTLAYASAAQSPDATLAGAVSLDP 155 (456)
T ss_pred cCCCcHHHHHHHhhChhhhhcCccCCCC
Confidence 99999999988887764 3555555544
No 262
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=59.50 E-value=25 Score=22.80 Aligned_cols=25 Identities=24% Similarity=0.174 Sum_probs=20.9
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcCc
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~~ 117 (157)
+...-.+.|-|.|+.++..++...+
T Consensus 24 gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 24 GPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 4568889999999999999888644
No 263
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=59.17 E-value=13 Score=26.82 Aligned_cols=29 Identities=38% Similarity=0.591 Sum_probs=24.9
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCC
Q 044507 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
|.|+|.-|.++. .+.++..||.|+..|+.
T Consensus 253 Pmi~fakG~g~~-------Le~l~~tG~DVvgLDWT 281 (359)
T KOG2872|consen 253 PMILFAKGSGGA-------LEELAQTGYDVVGLDWT 281 (359)
T ss_pred ceEEEEcCcchH-------HHHHHhcCCcEEeeccc
Confidence 788888888775 78889999999999984
No 264
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=59.08 E-value=21 Score=25.35 Aligned_cols=38 Identities=13% Similarity=0.203 Sum_probs=30.1
Q ss_pred CCCEEEEeCCCCCc--hhhHHHHHHHHHhCCCEEEecCCC
Q 044507 23 QGPVILFLHGFPEL--WYSWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 23 ~~p~vl~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
..|+||++.|+-+. ...-..+...+..+|+.|+.+..|
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 35899999998654 445678888889999999988665
No 265
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=58.16 E-value=18 Score=25.67 Aligned_cols=22 Identities=18% Similarity=0.099 Sum_probs=18.2
Q ss_pred CCCcEEEEEEcHHHHHHHHHHh
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCL 114 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~ 114 (157)
+.++..++|||.|=..|+..+.
T Consensus 74 g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 74 LPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred CCCCcEEeecCHHHHHHHHHhC
Confidence 5689999999999988876654
No 266
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=58.11 E-value=22 Score=24.67 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=30.0
Q ss_pred CCCEEEEeCCCCCc--hhhHHHHHHHHHhCCCEEEecCCC
Q 044507 23 QGPVILFLHGFPEL--WYSWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 23 ~~p~vl~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
+.|+||++.|+-+. ...-..+...+..+|+.|..+..|
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 35899999998654 445577888889999999888765
No 267
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=57.68 E-value=18 Score=25.59 Aligned_cols=28 Identities=25% Similarity=0.237 Sum_probs=20.7
Q ss_pred HHHHHhCCCCCcEEEEEEcHHHHHHHHHHh
Q 044507 85 GLIDTVAPNDEKVFVVGHDWGAFMAWFLCL 114 (157)
Q Consensus 85 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~ 114 (157)
+.++.. +..+-.++|||.|-..|+..+.
T Consensus 74 ~~l~~~--Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 74 RLWRSW--GVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHc--CCcccEEEecCHHHHHHHHHhC
Confidence 344444 6678899999999988876654
No 268
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=57.60 E-value=76 Score=23.51 Aligned_cols=35 Identities=31% Similarity=0.282 Sum_probs=25.7
Q ss_pred EEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCC
Q 044507 27 ILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFG 63 (157)
Q Consensus 27 vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g 63 (157)
|+|+|.... .+|+.+++.|.++|+.|..+-..+.+
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~ 36 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAA 36 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCC
Confidence 678886432 24788999999999998877655443
No 269
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=57.16 E-value=74 Score=23.25 Aligned_cols=46 Identities=20% Similarity=0.251 Sum_probs=31.9
Q ss_pred CCHHHHHHHHHHHHHHhCC---CCCcEEEEEEcHHHHHHHHHHhcCccc
Q 044507 74 YTCFHVIGDLVGLIDTVAP---NDEKVFVVGHDWGAFMAWFLCLFRPDR 119 (157)
Q Consensus 74 ~~~~~~~~~l~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~~~~~~~~ 119 (157)
+.++..+..-.+.++.... +++++.++|.|-|=.++.+.++.+...
T Consensus 18 ~GCe~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG~g 66 (398)
T COG3007 18 YGCEANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFGPG 66 (398)
T ss_pred ccHHHHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhCCC
Confidence 3445445544555554332 678999999999999999988876543
No 270
>PRK02399 hypothetical protein; Provisional
Probab=57.11 E-value=85 Score=23.91 Aligned_cols=98 Identities=16% Similarity=0.132 Sum_probs=55.6
Q ss_pred CEEEEeCCCCC-chhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCC-----------------CCC----CCHHHHHHH
Q 044507 25 PVILFLHGFPE-LWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPD-----------------VTS----YTCFHVIGD 82 (157)
Q Consensus 25 p~vl~~hG~~~-~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~-----------------~~~----~~~~~~~~~ 82 (157)
+.|+++ |... -...+..+.+.+.++|..++.+|.-..+......+ ... ..+....+.
T Consensus 4 ~~I~ii-gT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~g 82 (406)
T PRK02399 4 KRIYIA-GTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEG 82 (406)
T ss_pred CEEEEE-eccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHH
Confidence 455555 4443 34556666777777899999999843332111000 000 001112223
Q ss_pred HHHHHHHhCC--CCCcEEEEEEcHHHHHHHHHHhcCccceeEE
Q 044507 83 LVGLIDTVAP--NDEKVFVVGHDWGAFMAWFLCLFRPDRVKAL 123 (157)
Q Consensus 83 l~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~ 123 (157)
...++..+.. ...-++-+|-|.|..++.......|--+-++
T Consensus 83 a~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKl 125 (406)
T PRK02399 83 AAAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKL 125 (406)
T ss_pred HHHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeE
Confidence 3344444432 3567999999999999998888777544443
No 271
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=55.35 E-value=11 Score=27.18 Aligned_cols=29 Identities=21% Similarity=0.267 Sum_probs=21.3
Q ss_pred HHHHHHhCCCCCcEEEEEEcHHHHHHHHHHh
Q 044507 84 VGLIDTVAPNDEKVFVVGHDWGAFMAWFLCL 114 (157)
Q Consensus 84 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~ 114 (157)
.++++.. +..+-.++|||+|=..|+..+.
T Consensus 75 ~~~l~~~--Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 75 ARLLRSW--GIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHT--THCESEEEESTTHHHHHHHHTT
T ss_pred hhhhccc--ccccceeeccchhhHHHHHHCC
Confidence 3444444 6789999999999888876544
No 272
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=55.24 E-value=30 Score=22.73 Aligned_cols=24 Identities=33% Similarity=0.148 Sum_probs=20.0
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcC
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFR 116 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~ 116 (157)
+...-.+.|-|.||.++..++...
T Consensus 25 ~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 25 GILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred CCCcceEEEECHHHHHHHHHHcCC
Confidence 445689999999999999888754
No 273
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=54.36 E-value=29 Score=25.11 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=24.8
Q ss_pred HHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcC
Q 044507 82 DLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFR 116 (157)
Q Consensus 82 ~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 116 (157)
-+.+.++.. +...-.++|-|+|+.++..++..+
T Consensus 32 GvL~aLee~--gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEA--GIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHc--CCCCCEEEEECHHHHHHHHHHcCC
Confidence 344555554 556788999999999999998864
No 274
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=54.22 E-value=23 Score=23.03 Aligned_cols=34 Identities=26% Similarity=0.255 Sum_probs=26.2
Q ss_pred CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEe
Q 044507 23 QGPVILFLHGFPELWYSWRHQITALASLGYRAVA 56 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~ 56 (157)
..+.|+++.|-+.+..+=--.+++|.++|+.|.+
T Consensus 24 ~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v 57 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGDGLVAARHLANRGYNVTV 57 (169)
T ss_dssp TT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEE
Confidence 4568888889887777766778999999999877
No 275
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=54.18 E-value=94 Score=23.52 Aligned_cols=75 Identities=15% Similarity=0.135 Sum_probs=41.2
Q ss_pred CEEEEeCCCCC---chhhHHHHHHHHHhCCCEEEecCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CCCCcEE
Q 044507 25 PVILFLHGFPE---LWYSWRHQITALASLGYRAVAPDLRGF--GDTDAPPDVTSYTCFHVIGDLVGLIDTVA-PNDEKVF 98 (157)
Q Consensus 25 p~vl~~hG~~~---~~~~~~~~~~~l~~~g~~v~~~d~~g~--g~s~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~i~ 98 (157)
.++++++-... ...........|.+.|+.++-|..--+ |+...- ...+.++....+...+..-. ....++.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~g---~~~~~~~i~~~v~~~~~~~~~~~~~~vl 189 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGKG---RLAEPETIVKAAEREFSPKEDLEGKRVL 189 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccCC---CCCCHHHHHHHHHHHHhhccccCCceEE
Confidence 35555555332 223345556778888988877765333 322111 34556666666666654311 1456777
Q ss_pred EEEE
Q 044507 99 VVGH 102 (157)
Q Consensus 99 l~G~ 102 (157)
+.|-
T Consensus 190 it~g 193 (390)
T TIGR00521 190 ITAG 193 (390)
T ss_pred EecC
Confidence 7776
No 276
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=53.41 E-value=26 Score=25.58 Aligned_cols=31 Identities=19% Similarity=0.286 Sum_probs=22.5
Q ss_pred CCCCEEEEeCCCCCchhhH--HHHHHHHHhCCC
Q 044507 22 GQGPVILFLHGFPELWYSW--RHQITALASLGY 52 (157)
Q Consensus 22 ~~~p~vl~~hG~~~~~~~~--~~~~~~l~~~g~ 52 (157)
..+|.++=+||+.|+..+| +-+++++-..|-
T Consensus 107 p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~Gl 139 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYVAEIIAENLYRGGL 139 (344)
T ss_pred CCCCeEEEecCCCCCchhHHHHHHHHHHHhccc
Confidence 3678899999999998888 334555555553
No 277
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=52.84 E-value=69 Score=21.58 Aligned_cols=41 Identities=10% Similarity=0.113 Sum_probs=31.8
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcH----HHHHHHHHHhcC
Q 044507 73 SYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDW----GAFMAWFLCLFR 116 (157)
Q Consensus 73 ~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~----Gg~~a~~~~~~~ 116 (157)
.++.+..+..+.++++.. + ..++++|+|. |..++.+++.+.
T Consensus 90 ~~~~e~~a~al~~~i~~~--~-p~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 90 GADTLATAKALAAAIKKI--G-VDLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred CCChHHHHHHHHHHHHHh--C-CCEEEEcCCcccCCcCcHHHHHHHHh
Confidence 456777888888888776 4 5799999988 778888888764
No 278
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=52.80 E-value=39 Score=21.29 Aligned_cols=14 Identities=36% Similarity=0.646 Sum_probs=10.3
Q ss_pred HHHHHhCCCEEEec
Q 044507 44 ITALASLGYRAVAP 57 (157)
Q Consensus 44 ~~~l~~~g~~v~~~ 57 (157)
+..|.+.|++|+.+
T Consensus 101 ~~~L~~~GwrvlvV 114 (150)
T COG3727 101 IKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHcCCeEEEE
Confidence 46778889888654
No 279
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=52.33 E-value=40 Score=23.99 Aligned_cols=29 Identities=21% Similarity=0.251 Sum_probs=21.5
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 044507 74 YTCFHVIGDLVGLIDTVAPNDEKVFVVGH 102 (157)
Q Consensus 74 ~~~~~~~~~l~~~~~~~~~~~~~i~l~G~ 102 (157)
.....+.+++.+.++.......++.|++|
T Consensus 193 ~~~~~Ql~WL~~~L~~a~~~~~~v~I~~H 221 (296)
T cd00842 193 TDPAGQLQWLEDELQEAEQAGEKVWIIGH 221 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 34566778888888877545578999988
No 280
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=51.10 E-value=43 Score=22.92 Aligned_cols=24 Identities=17% Similarity=0.076 Sum_probs=19.6
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcC
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFR 116 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~ 116 (157)
+...-.+.|-|.|+.++..++...
T Consensus 26 gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 26 GLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred CCCceEEEEeCHHHHHHHHHHcCC
Confidence 445567999999999999988754
No 281
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=50.90 E-value=7.4 Score=33.83 Aligned_cols=29 Identities=21% Similarity=0.253 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEcHHHHHH
Q 044507 79 VIGDLVGLIDTVAPNDEKVFVVGHDWGAFMA 109 (157)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a 109 (157)
....+.+++..+ +..+=.++|||.|-.-+
T Consensus 568 iQiaLtDlLs~l--gi~PDGIvGHS~GElgc 596 (2376)
T KOG1202|consen 568 IQIALTDLLSCL--GIRPDGIVGHSLGELGC 596 (2376)
T ss_pred HHHHHHHHHHhc--CCCCCcccccccchhcc
Confidence 334566777777 78899999999985433
No 282
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=50.80 E-value=26 Score=24.70 Aligned_cols=21 Identities=24% Similarity=0.324 Sum_probs=17.5
Q ss_pred CCcEEEEEEcHHHHHHHHHHh
Q 044507 94 DEKVFVVGHDWGAFMAWFLCL 114 (157)
Q Consensus 94 ~~~i~l~G~S~Gg~~a~~~~~ 114 (157)
..+-.++|||+|=..|+..+.
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhC
Confidence 678899999999988876654
No 283
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=49.96 E-value=1.2e+02 Score=23.47 Aligned_cols=48 Identities=8% Similarity=0.043 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCccc--eeEEEEe
Q 044507 77 FHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPDR--VKALVNL 126 (157)
Q Consensus 77 ~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~--~~~~i~~ 126 (157)
++..+++.++-+.+ .+..+.+|-.++=|.-|...|..+.+. +.++|+-
T Consensus 198 e~Lm~El~~Ik~~~--~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 198 EELMDELKEIKEVI--NPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHHHHHHHHhhc--CCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 34555666666666 678899999999999999988876654 5666664
No 284
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=49.44 E-value=8.1 Score=26.67 Aligned_cols=37 Identities=22% Similarity=0.255 Sum_probs=26.4
Q ss_pred CCEEEEeCCCCCchhh--HHHHHHHHHhCCCEEEecCCC
Q 044507 24 GPVILFLHGFPELWYS--WRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~ 60 (157)
.|+||++.|+-++... -..+...|..+|+.|.++..|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 4799999999766443 466777788889999998765
No 285
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=49.00 E-value=40 Score=23.43 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=26.7
Q ss_pred CCCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCC
Q 044507 22 GQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 22 ~~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
.+.|.+|++.|.......+ .++.++.++||.|++-..+
T Consensus 4 ~~~~k~VlItgcs~GGIG~-ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIGY-ALAKEFARNGYLVYATARR 41 (289)
T ss_pred ccCCCeEEEeecCCcchhH-HHHHHHHhCCeEEEEEccc
Confidence 3457778888775544444 5678899999999887543
No 286
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=48.80 E-value=42 Score=22.75 Aligned_cols=32 Identities=16% Similarity=0.153 Sum_probs=24.0
Q ss_pred HHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCc
Q 044507 84 VGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 84 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~ 117 (157)
.+.+.+. +...-.+.|-|.|+.++..++...+
T Consensus 17 l~aL~e~--g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 17 LKALAEA--GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHc--CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 3344444 4466789999999999999998774
No 287
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=48.68 E-value=1e+02 Score=22.30 Aligned_cols=51 Identities=18% Similarity=0.141 Sum_probs=31.6
Q ss_pred HHHHHHHHHhCC-CCCcEEEEEEcHHHHHHHHHHhc---CccceeEEEEeecccC
Q 044507 81 GDLVGLIDTVAP-NDEKVFVVGHDWGAFMAWFLCLF---RPDRVKALVNLSVVFN 131 (157)
Q Consensus 81 ~~l~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~---~~~~~~~~i~~~~~~~ 131 (157)
..+.+....+-. ...++++.|.|.|+.-+-..... .-+.+++.+..+++..
T Consensus 94 ~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 94 EAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred HHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 334444444432 35689999999998765443222 2345888888877654
No 288
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=48.21 E-value=24 Score=24.17 Aligned_cols=31 Identities=23% Similarity=0.184 Sum_probs=22.5
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCC
Q 044507 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
+.-++++|.|-... +..|+++|+.|+.+|..
T Consensus 38 ~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDls 68 (218)
T PF05724_consen 38 GGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDLS 68 (218)
T ss_dssp SEEEEETTTTTSCH-----HHHHHHTTEEEEEEES-
T ss_pred CCeEEEeCCCChHH-----HHHHHHCCCeEEEEecC
Confidence 35677888876533 45778899999999973
No 289
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=48.03 E-value=15 Score=22.48 Aligned_cols=34 Identities=15% Similarity=0.073 Sum_probs=25.2
Q ss_pred EEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCC
Q 044507 27 ILFLHGFPELWYSWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 27 vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
+|...|..|+...+..+.+.|.++|+.|...-.+
T Consensus 2 li~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 2 LIATGGTRGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred EEEEcCChhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 4555577788888888999999999998655444
No 290
>PTZ00445 p36-lilke protein; Provisional
Probab=47.94 E-value=71 Score=22.02 Aligned_cols=24 Identities=21% Similarity=0.203 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHhCCCEEEecCCCC
Q 044507 38 YSWRHQITALASLGYRAVAPDLRG 61 (157)
Q Consensus 38 ~~~~~~~~~l~~~g~~v~~~d~~g 61 (157)
+.-..+.+.|.+.|..+++.|+-.
T Consensus 29 ~~~~~~v~~L~~~GIk~Va~D~Dn 52 (219)
T PTZ00445 29 ESADKFVDLLNECGIKVIASDFDL 52 (219)
T ss_pred HHHHHHHHHHHHcCCeEEEecchh
Confidence 344667888999999999999853
No 291
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=47.59 E-value=48 Score=21.55 Aligned_cols=25 Identities=16% Similarity=0.114 Sum_probs=20.3
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcCc
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~~ 117 (157)
+...-.+.|-|.|+.++..++...+
T Consensus 26 g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 26 GIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred CCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 4456789999999999998887643
No 292
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=47.46 E-value=46 Score=23.68 Aligned_cols=32 Identities=9% Similarity=0.107 Sum_probs=24.1
Q ss_pred HHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcC
Q 044507 83 LVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFR 116 (157)
Q Consensus 83 l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 116 (157)
+.+.+++. +..--.+.|-|+|+.++..++...
T Consensus 28 VL~aLeE~--gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEA--GIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHc--CCCccEEEEECHHHHHHHHHHcCC
Confidence 44444554 556778999999999999998763
No 293
>COG0218 Predicted GTPase [General function prediction only]
Probab=47.02 E-value=33 Score=23.24 Aligned_cols=32 Identities=16% Similarity=0.131 Sum_probs=19.2
Q ss_pred EEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 044507 54 AVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDT 89 (157)
Q Consensus 54 v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~ 89 (157)
...+|+||||....+. .-.+.+.+.+.++++.
T Consensus 72 ~~lVDlPGYGyAkv~k----~~~e~w~~~i~~YL~~ 103 (200)
T COG0218 72 LRLVDLPGYGYAKVPK----EVKEKWKKLIEEYLEK 103 (200)
T ss_pred EEEEeCCCcccccCCH----HHHHHHHHHHHHHHhh
Confidence 6788999999886542 2233344444455544
No 294
>PRK10279 hypothetical protein; Provisional
Probab=46.73 E-value=42 Score=24.31 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=24.6
Q ss_pred HHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCc
Q 044507 83 LVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 83 l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~ 117 (157)
+.+.++.. +...-.+.|-|+|+.++..++....
T Consensus 23 VL~aL~E~--gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKV--GIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHc--CCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 34444444 5678899999999999999887643
No 295
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=46.68 E-value=25 Score=23.15 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=25.2
Q ss_pred EEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCC
Q 044507 28 LFLHGFPELWYSWRHQITALASLGYRAVAPDLRGF 62 (157)
Q Consensus 28 l~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~ 62 (157)
|++.|.|++..+-.+++.+|..+ |...-+.+|..
T Consensus 44 vl~cGNGgSaadAqHfaael~gR-f~~eR~~lpaI 77 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGR-FEKERPSLPAI 77 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhH-HHhcCCCCCee
Confidence 55669999999999999888876 65555555543
No 296
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=46.39 E-value=42 Score=24.15 Aligned_cols=33 Identities=12% Similarity=0.096 Sum_probs=25.6
Q ss_pred HHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcC
Q 044507 82 DLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFR 116 (157)
Q Consensus 82 ~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 116 (157)
-+.+.++.. +...-.+.|-|+|+.++..++...
T Consensus 28 GVl~aL~e~--gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 28 GVLKALEEA--GIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHc--CCCccEEEecCHHHHHHHHHHcCC
Confidence 345555555 678899999999999999888853
No 297
>COG1225 Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=45.03 E-value=52 Score=21.37 Aligned_cols=48 Identities=15% Similarity=0.251 Sum_probs=29.5
Q ss_pred CCEEEEEeecCCCCEEEEeCCCC---C---chhhHHHHHHHHHhCCCEEEecCC
Q 044507 12 NGINMHIAEKGQGPVILFLHGFP---E---LWYSWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 12 ~g~~~~~~~~~~~p~vl~~hG~~---~---~~~~~~~~~~~l~~~g~~v~~~d~ 59 (157)
+|..+.......+++||++..-- + ....++.....+.+.|..|+.+..
T Consensus 19 ~g~~v~Lsd~~Gk~VVLyFYPk~~TpgCT~Ea~~Frd~~~ef~~~~a~V~GIS~ 72 (157)
T COG1225 19 DGETVSLSDLRGKPVVLYFYPKDFTPGCTTEACDFRDLLEEFEKLGAVVLGISP 72 (157)
T ss_pred CCCEEehHHhcCCcEEEEECCCCCCCcchHHHHHHHHHHHHHHhCCCEEEEEeC
Confidence 45455555444456666655332 2 234566677788888999988875
No 298
>COG3933 Transcriptional antiterminator [Transcription]
Probab=44.74 E-value=1.5e+02 Score=23.05 Aligned_cols=71 Identities=17% Similarity=0.196 Sum_probs=50.1
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcH
Q 044507 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDW 104 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~ 104 (157)
.++|.-||.... .+....+..|-+. -.+.++|+| -..+..+..+.+.+.+++. +..+=.++=-.|
T Consensus 110 ~vIiiAHG~sTA-SSmaevanrLL~~-~~~~aiDMP-----------Ldvsp~~vle~l~e~~k~~--~~~~GlllLVDM 174 (470)
T COG3933 110 KVIIIAHGYSTA-SSMAEVANRLLGE-EIFIAIDMP-----------LDVSPSDVLEKLKEYLKER--DYRSGLLLLVDM 174 (470)
T ss_pred eEEEEecCcchH-HHHHHHHHHHhhc-cceeeecCC-----------CcCCHHHHHHHHHHHHHhc--CccCceEEEEec
Confidence 488999998754 3344566677766 477888987 5677888888888888887 555544444578
Q ss_pred HHHHHH
Q 044507 105 GAFMAW 110 (157)
Q Consensus 105 Gg~~a~ 110 (157)
|+..+.
T Consensus 175 GSL~~f 180 (470)
T COG3933 175 GSLTSF 180 (470)
T ss_pred chHHHH
Confidence 876553
No 299
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=44.67 E-value=75 Score=22.61 Aligned_cols=73 Identities=14% Similarity=0.135 Sum_probs=34.7
Q ss_pred EEEEeCCCCCchhhH--HHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEE
Q 044507 26 VILFLHGFPELWYSW--RHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVV 100 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~ 100 (157)
++|++.|.++++... ..+.+.+.+.+..++.++-...+....... ...........+...++..- ..+.++|+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~~~~~~y~-~~~~Ek~~R~~l~s~v~r~l-s~~~iVI~ 76 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLGIDRNDYA-DSKKEKEARGSLKSAVERAL-SKDTIVIL 76 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH-TTSSS---GGGHHHHHHHHHHHHHHHH-TT-SEEEE
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccccchhhhh-chhhhHHHHHHHHHHHHHhh-ccCeEEEE
Confidence 578888999886654 556777777888888887543331111110 12233334445555555542 33455543
No 300
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=44.32 E-value=64 Score=21.55 Aligned_cols=48 Identities=15% Similarity=0.151 Sum_probs=32.6
Q ss_pred eEEEECCEEEEEeecC----CCC--EEEEeCCCCCchhhHHHHHHHHHhCCCEE
Q 044507 7 RIVKVNGINMHIAEKG----QGP--VILFLHGFPELWYSWRHQITALASLGYRA 54 (157)
Q Consensus 7 ~~~~~~g~~~~~~~~~----~~p--~vl~~hG~~~~~~~~~~~~~~l~~~g~~v 54 (157)
..+..++..+.|.... .+. .|-++-|+........++.+.+.++|+.+
T Consensus 38 ge~~~~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e~P~l~~l~~~~~~~ 91 (184)
T TIGR01626 38 GEIVLSGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXNASLIDAIKAAKFPP 91 (184)
T ss_pred ceEEEcCCcccceeccHHHcCCCEEEEEEEecCCChhhccchHHHHHHHcCCCc
Confidence 4556677788887665 233 33345566666667788899998888777
No 301
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=44.28 E-value=47 Score=21.62 Aligned_cols=33 Identities=15% Similarity=0.117 Sum_probs=22.9
Q ss_pred EEEeCCCCCchhhHHHHHHHHHhCCCEEEecCC
Q 044507 27 ILFLHGFPELWYSWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 27 vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (157)
-|++.|.|.+...-..+...|...|..+...+-
T Consensus 32 ~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~ 64 (179)
T TIGR03127 32 RIFVAGAGRSGLVGKAFAMRLMHLGFNVYVVGE 64 (179)
T ss_pred EEEEEecCHHHHHHHHHHHHHHhCCCeEEEeCC
Confidence 467778887765556667777777888876643
No 302
>PRK01261 aroD 3-dehydroquinate dehydratase; Provisional
Probab=44.18 E-value=39 Score=23.41 Aligned_cols=46 Identities=7% Similarity=-0.168 Sum_probs=21.8
Q ss_pred EEEEEcHHHHHHHHHHhcCccceeEEEEeecccCCCCCchHHHHHHHhhc
Q 044507 98 FVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFNPFGSINNVIEALRAYY 147 (157)
Q Consensus 98 ~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 147 (157)
-+++.|||- ...+.+. ..+.+.+..+....+..+.+-....++.++
T Consensus 178 p~i~isMG~-~iSRi~~---~~fGS~lTyas~~~~sAPGQi~v~~l~~~~ 223 (229)
T PRK01261 178 PIVFIPMGR-EFLRIFS---GYYVSDIVYARYDNETAPGQPKRDYYESAF 223 (229)
T ss_pred CEEEEECCc-HHHHHHH---HHHCCceEEeeCCCCCCCCCCCHHHHHHHH
Confidence 355778988 4334433 234444455444444444443334444433
No 303
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=43.64 E-value=48 Score=24.08 Aligned_cols=37 Identities=16% Similarity=0.105 Sum_probs=27.0
Q ss_pred CcEEEEEEcHHHHHHHHHHhcCc----------------cceeEEEEeecccC
Q 044507 95 EKVFVVGHDWGAFMAWFLCLFRP----------------DRVKALVNLSVVFN 131 (157)
Q Consensus 95 ~~i~l~G~S~Gg~~a~~~~~~~~----------------~~~~~~i~~~~~~~ 131 (157)
.++.|+|+|-||.+.-.+..+.. ..|+.+-.+++..+
T Consensus 193 ~~~~LiGFSKGcvVLNqll~El~~~~~~~~~~~~~~~~l~~I~~~~wLD~Gh~ 245 (303)
T PF10561_consen 193 PPLTLIGFSKGCVVLNQLLYELHYLEELARVDKEIERFLSRISDMYWLDGGHN 245 (303)
T ss_pred CceEEEEecCcchHHHHHHHHHHhhhcccCCchHHHHHHHhhheEEEeccCCC
Confidence 58999999999988866655432 24777777777655
No 304
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=43.63 E-value=29 Score=24.21 Aligned_cols=17 Identities=18% Similarity=0.438 Sum_probs=13.5
Q ss_pred CCCcEEEEEEcHHHHHH
Q 044507 93 NDEKVFVVGHDWGAFMA 109 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a 109 (157)
+...|.+.|||+|..=.
T Consensus 233 ~i~~I~i~GhSl~~~D~ 249 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDY 249 (270)
T ss_pred CCCEEEEEeCCCchhhH
Confidence 45789999999987543
No 305
>PRK02842 light-independent protochlorophyllide reductase subunit N; Provisional
Probab=42.73 E-value=1e+02 Score=23.45 Aligned_cols=41 Identities=17% Similarity=0.143 Sum_probs=26.5
Q ss_pred CCEEEEeCCCC---CchhhHHHHHHHHHhC--CCEEEecCCCCCCC
Q 044507 24 GPVILFLHGFP---ELWYSWRHQITALASL--GYRAVAPDLRGFGD 64 (157)
Q Consensus 24 ~p~vl~~hG~~---~~~~~~~~~~~~l~~~--g~~v~~~d~~g~g~ 64 (157)
+|-+|++.... --.++...+++.+.++ |..|+.++-+|+..
T Consensus 97 ~P~~I~V~tTC~~e~IGDDi~~v~~e~~~~~~~~pvv~v~t~Gf~g 142 (427)
T PRK02842 97 NISVLFLVGSCPSEVIKLDLEGLAERLSTEFAGVPVLNYSGSGLET 142 (427)
T ss_pred CCCEEEEECCChHHhhcCCHHHHHHHhhcccCCCeEEEeeCCCccc
Confidence 46555555432 2345677777777766 78888888887744
No 306
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=42.53 E-value=54 Score=26.31 Aligned_cols=35 Identities=20% Similarity=0.363 Sum_probs=24.9
Q ss_pred CCCcEEEEEE------cHHHHHHHHHHhcCccceeEEEEeec
Q 044507 93 NDEKVFVVGH------DWGAFMAWFLCLFRPDRVKALVNLSV 128 (157)
Q Consensus 93 ~~~~i~l~G~------S~Gg~~a~~~~~~~~~~~~~~i~~~~ 128 (157)
...+++++|| +.|+.+++..-+...++ .+.+.+.|
T Consensus 336 e~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp 376 (655)
T COG3887 336 ESDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDP 376 (655)
T ss_pred hcCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECc
Confidence 4589999999 67888887776655444 45566554
No 307
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=42.35 E-value=38 Score=23.16 Aligned_cols=28 Identities=25% Similarity=0.220 Sum_probs=18.7
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCC
Q 044507 26 VILFLHGFPELWYSWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
+++...|.+.+ +..|+++|+.|+.+|.-
T Consensus 41 vL~~gCG~G~d-------a~~LA~~G~~V~avD~s 68 (218)
T PRK13255 41 VLVPLCGKSLD-------MLWLAEQGHEVLGVELS 68 (218)
T ss_pred EEEeCCCChHh-------HHHHHhCCCeEEEEccC
Confidence 44444455544 55667889999999863
No 308
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=42.10 E-value=31 Score=23.83 Aligned_cols=29 Identities=10% Similarity=0.063 Sum_probs=19.2
Q ss_pred EEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCC
Q 044507 27 ILFLHGFPELWYSWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 27 vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
-|+++|.|.... +..|+++|+.|+.+|+.
T Consensus 46 rvLvPgCGkg~D-----~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSID-----MLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChHH-----HHHHHhCCCcEEEEecC
Confidence 445555554311 45778889999999873
No 309
>PHA02114 hypothetical protein
Probab=41.96 E-value=51 Score=19.57 Aligned_cols=33 Identities=21% Similarity=0.383 Sum_probs=24.6
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCCCEEEecC
Q 044507 26 VILFLHGFPELWYSWRHQITALASLGYRAVAPD 58 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 58 (157)
+|++=-.+..+...|-.....|.+.||+|++-.
T Consensus 84 tivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 84 TIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred eEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 555544566667778888889999999998754
No 310
>PRK06696 uridine kinase; Validated
Probab=41.92 E-value=85 Score=21.33 Aligned_cols=38 Identities=8% Similarity=0.088 Sum_probs=27.4
Q ss_pred CCCCEEEEeCCCCCchhhH--HHHHHHHHhCCCEEEecCC
Q 044507 22 GQGPVILFLHGFPELWYSW--RHQITALASLGYRAVAPDL 59 (157)
Q Consensus 22 ~~~p~vl~~hG~~~~~~~~--~~~~~~l~~~g~~v~~~d~ 59 (157)
...|.+|.+.|..++.... ..+++.|.+.|..++.+..
T Consensus 19 ~~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~~ 58 (223)
T PRK06696 19 LTRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRASI 58 (223)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEecc
Confidence 3468999999988775554 5667778777777776443
No 311
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=41.30 E-value=70 Score=23.34 Aligned_cols=37 Identities=19% Similarity=0.146 Sum_probs=27.6
Q ss_pred CCEEEEeCC-CCC-----chhhHHHHHHHHHhCCCEEEecCCC
Q 044507 24 GPVILFLHG-FPE-----LWYSWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 24 ~p~vl~~hG-~~~-----~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
+|.|++.|| ..+ ..+.|..+++.+.++|+.|+.+-.+
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~ 217 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP 217 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh
Confidence 478888998 332 3456788999999999888876543
No 312
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=40.26 E-value=32 Score=25.00 Aligned_cols=20 Identities=20% Similarity=0.262 Sum_probs=17.2
Q ss_pred EEEEEEcHHHHHHHHHHhcC
Q 044507 97 VFVVGHDWGAFMAWFLCLFR 116 (157)
Q Consensus 97 i~l~G~S~Gg~~a~~~~~~~ 116 (157)
=.+.|-|.||.+++.++..+
T Consensus 34 D~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 34 DWIAGTSTGGILALALLHGK 53 (312)
T ss_pred cEEEeeChHHHHHHHHHcCC
Confidence 46899999999999998754
No 313
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=39.84 E-value=44 Score=25.49 Aligned_cols=27 Identities=22% Similarity=0.337 Sum_probs=21.7
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcCccc
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFRPDR 119 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~~~~ 119 (157)
+..+-.+.|-|.|+.++..++...++.
T Consensus 99 gl~p~vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 99 NLLPRIISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCHHH
Confidence 445568999999999999998876654
No 314
>PRK09936 hypothetical protein; Provisional
Probab=39.82 E-value=79 Score=22.89 Aligned_cols=31 Identities=19% Similarity=0.394 Sum_probs=27.6
Q ss_pred chhhHHHHHHHHHhCCCEEEecCCCCCCCCC
Q 044507 36 LWYSWRHQITALASLGYRAVAPDLRGFGDTD 66 (157)
Q Consensus 36 ~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~ 66 (157)
+..+|..+.+.+...|++.+.+.+.++|.++
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~ 66 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDAD 66 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCCC
Confidence 4678999999999999999999999998873
No 315
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=39.79 E-value=53 Score=26.82 Aligned_cols=37 Identities=22% Similarity=0.227 Sum_probs=28.6
Q ss_pred CCCEEEEeCCCCCc----------hhhHHHHHHHHHhCCCEEEecCC
Q 044507 23 QGPVILFLHGFPEL----------WYSWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 23 ~~p~vl~~hG~~~~----------~~~~~~~~~~l~~~g~~v~~~d~ 59 (157)
++.+||+.|..... ...+....+.|.++||.++.++-
T Consensus 47 ~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~e 93 (672)
T PRK14581 47 NTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQ 93 (672)
T ss_pred CceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHH
Confidence 45689999987532 23577788999999999999873
No 316
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=39.55 E-value=1.1e+02 Score=22.98 Aligned_cols=84 Identities=13% Similarity=0.099 Sum_probs=47.1
Q ss_pred EEEEeCCCCCc-------hhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEE
Q 044507 26 VILFLHGFPEL-------WYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVF 98 (157)
Q Consensus 26 ~vl~~hG~~~~-------~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~ 98 (157)
.+|++|....+ .++|..+.+.+.++. .+-.+|.-..|..+.. ....+..++-+++. ..-.
T Consensus 199 s~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~-~~pffDmAYQGfaSG~-------~d~DA~avR~F~~~-----g~~~ 265 (427)
T KOG1411|consen 199 SIILLHACAHNPTGVDPTKEQWEKISDLIKEKN-LLPFFDMAYQGFASGD-------LDKDAQAVRLFVED-----GHEI 265 (427)
T ss_pred cEEEeehhhcCCCCCCccHHHHHHHHHHhhhcc-ccchhhhhhcccccCC-------chhhHHHHHHHHHc-----CCce
Confidence 68899987544 457888888888773 3444555444444332 22334445544432 3445
Q ss_pred EEEEcHHHHHHHHHHhcCccceeEEEEee
Q 044507 99 VVGHDWGAFMAWFLCLFRPDRVKALVNLS 127 (157)
Q Consensus 99 l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~ 127 (157)
++..|+.-.+ ..|.+++.++-.+|
T Consensus 266 ~laQSyAKNM-----GLYgERvGa~svvc 289 (427)
T KOG1411|consen 266 LLAQSYAKNM-----GLYGERVGALSVVC 289 (427)
T ss_pred Eeehhhhhhc-----chhhhccceeEEEe
Confidence 5666664433 23566666665554
No 317
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=39.52 E-value=85 Score=18.79 Aligned_cols=75 Identities=15% Similarity=0.031 Sum_probs=50.3
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhC-CCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcH
Q 044507 26 VILFLHGFPELWYSWRHQITALASL-GYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDW 104 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~ 104 (157)
.||.-|| .-.......++.+... -..+.++++. ...+.++..+.+.+.++... ..+.+.++..=.
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~-----------~~~~~~~~~~~l~~~i~~~~-~~~~vlil~Dl~ 67 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY-----------PDESIEDFEEKLEEAIEELD-EGDGVLILTDLG 67 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET-----------TTSCHHHHHHHHHHHHHHCC-TTSEEEEEESST
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc-----------CCCCHHHHHHHHHHHHHhcc-CCCcEEEEeeCC
Confidence 4677888 5556666677777766 3456666553 34567788888999997763 357888888888
Q ss_pred HHHHHHHHHh
Q 044507 105 GAFMAWFLCL 114 (157)
Q Consensus 105 Gg~~a~~~~~ 114 (157)
||......+.
T Consensus 68 ggsp~n~a~~ 77 (116)
T PF03610_consen 68 GGSPFNEAAR 77 (116)
T ss_dssp TSHHHHHHHH
T ss_pred CCccchHHHH
Confidence 8765544433
No 318
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=39.27 E-value=65 Score=22.01 Aligned_cols=37 Identities=27% Similarity=0.251 Sum_probs=22.0
Q ss_pred CCCEEEEeCCCCCchh-----hHHHHHHHHHhCCCEEEecCC
Q 044507 23 QGPVILFLHGFPELWY-----SWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~-----~~~~~~~~l~~~g~~v~~~d~ 59 (157)
+++.|++.+|...... .|..+++.|.++++.|+..-.
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~ 145 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGG 145 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--S
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEcc
Confidence 4578888888876443 457778889888877766543
No 319
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=39.07 E-value=69 Score=20.85 Aligned_cols=31 Identities=16% Similarity=0.115 Sum_probs=20.9
Q ss_pred EEeCCCCCchhhHHHHHHHHHhCCCEEEecC
Q 044507 28 LFLHGFPELWYSWRHQITALASLGYRAVAPD 58 (157)
Q Consensus 28 l~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 58 (157)
|++-|.|.+...-..+...|...|..+..++
T Consensus 36 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~ 66 (179)
T cd05005 36 IFVYGAGRSGLVAKAFAMRLMHLGLNVYVVG 66 (179)
T ss_pred EEEEecChhHHHHHHHHHHHHhCCCeEEEeC
Confidence 5566877776555666667776677777764
No 320
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=38.71 E-value=49 Score=25.01 Aligned_cols=30 Identities=13% Similarity=0.165 Sum_probs=23.0
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcCccceeE
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFRPDRVKA 122 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~ 122 (157)
+..+-.+.|-|.|+.++..++...++.+..
T Consensus 109 gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~ 138 (391)
T cd07229 109 GLLPRIITGTATGALIAALVGVHTDEELLR 138 (391)
T ss_pred CCCCceEEEecHHHHHHHHHHcCCHHHHHH
Confidence 455667999999999999999865554433
No 321
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=38.67 E-value=84 Score=21.67 Aligned_cols=22 Identities=14% Similarity=-0.040 Sum_probs=18.5
Q ss_pred cEEEEEEcHHHHHHHHHHhcCc
Q 044507 96 KVFVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 96 ~i~l~G~S~Gg~~a~~~~~~~~ 117 (157)
...+.|-|.|+.++..++...+
T Consensus 30 ~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 30 TTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred CCEEEEEcHHHHHHHHHHcCCC
Confidence 4589999999999998888654
No 322
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=38.45 E-value=1.7e+02 Score=22.01 Aligned_cols=35 Identities=31% Similarity=0.487 Sum_probs=28.9
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeec
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSV 128 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~ 128 (157)
..++.++.|.|-=|-.++..++ -..++.+++-+.-
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vi 204 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVI 204 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEE
Confidence 5789999999999999999888 5567888876653
No 323
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=37.82 E-value=96 Score=20.01 Aligned_cols=24 Identities=17% Similarity=0.009 Sum_probs=19.3
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcC
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFR 116 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~ 116 (157)
+...-.+.|-|.|+.++..++...
T Consensus 26 ~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 26 GIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred CCCeeEEEEECHHHHHHHHHHcCC
Confidence 345668999999999999888654
No 324
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=37.80 E-value=72 Score=17.51 Aligned_cols=30 Identities=23% Similarity=0.115 Sum_probs=19.9
Q ss_pred EeCCCCCch--hhHHHHHHHHHhCCCEEEecC
Q 044507 29 FLHGFPELW--YSWRHQITALASLGYRAVAPD 58 (157)
Q Consensus 29 ~~hG~~~~~--~~~~~~~~~l~~~g~~v~~~d 58 (157)
++-|.+|.. .--..++..+++.|+.+..+|
T Consensus 3 ~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 3 VVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 344444332 333667788888899999888
No 325
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=37.64 E-value=65 Score=19.45 Aligned_cols=30 Identities=20% Similarity=0.211 Sum_probs=20.8
Q ss_pred cEEEEE-EcHHHHHHHHHHhcCccceeEEEEe
Q 044507 96 KVFVVG-HDWGAFMAWFLCLFRPDRVKALVNL 126 (157)
Q Consensus 96 ~i~l~G-~S~Gg~~a~~~~~~~~~~~~~~i~~ 126 (157)
|+.++| ..+.|.-.++++.++|+ +.-+.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~ 31 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALV 31 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEee
Confidence 577888 78888888888888775 4433333
No 326
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=37.21 E-value=51 Score=25.05 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=23.2
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcCccceeE
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFRPDRVKA 122 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~ 122 (157)
+..+-.+.|-|.|+.++..++...++.+..
T Consensus 93 gllp~iI~GtSAGAivaalla~~t~~el~~ 122 (407)
T cd07232 93 DLLPNVISGTSGGSLVAALLCTRTDEELKQ 122 (407)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCHHHHHH
Confidence 445667999999999999999876655433
No 327
>PRK07933 thymidylate kinase; Validated
Probab=37.01 E-value=1.1e+02 Score=20.79 Aligned_cols=39 Identities=13% Similarity=0.162 Sum_probs=28.3
Q ss_pred EEEeCCCCCc--hhhHHHHHHHHHhCCCEEEecCCCCCCCC
Q 044507 27 ILFLHGFPEL--WYSWRHQITALASLGYRAVAPDLRGFGDT 65 (157)
Q Consensus 27 vl~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~s 65 (157)
+|.+-|.-|+ ...-..+.+.|.++|+.|+....|.+|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 4556666444 44567788999999999999998866543
No 328
>PRK09437 bcp thioredoxin-dependent thiol peroxidase; Reviewed
Probab=36.96 E-value=1.1e+02 Score=19.21 Aligned_cols=50 Identities=10% Similarity=0.124 Sum_probs=29.5
Q ss_pred EECCEEEEEeecCCCCEEEEeCCC-CCc--h---hhHHHHHHHHHhCCCEEEecCC
Q 044507 10 KVNGINMHIAEKGQGPVILFLHGF-PEL--W---YSWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 10 ~~~g~~~~~~~~~~~p~vl~~hG~-~~~--~---~~~~~~~~~l~~~g~~v~~~d~ 59 (157)
..+|..+.......+++||++-.. .+. . ..+....+.+.+.|..++.++.
T Consensus 17 ~~~G~~~~l~~~~gk~~ll~f~~~~~~p~C~~~~~~l~~~~~~~~~~~v~vi~Is~ 72 (154)
T PRK09437 17 DQDGEQVSLTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKKAGVVVLGIST 72 (154)
T ss_pred CCCCCEEeHHHhCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 356666665544456776666432 222 1 2234556677778899999863
No 329
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=36.86 E-value=1.9e+02 Score=22.07 Aligned_cols=56 Identities=11% Similarity=0.085 Sum_probs=30.6
Q ss_pred HHHHHhC--CCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcH
Q 044507 44 ITALASL--GYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDW 104 (157)
Q Consensus 44 ~~~l~~~--g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~ 104 (157)
.+.+.++ -|.+|.+|+|.++.+.... .+..+.-.++......+. .+.-+.++--+.
T Consensus 281 l~~~~~~g~~fDlIilDPPsF~r~k~~~----~~~~rdy~~l~~~~~~iL-~pgG~l~~~s~~ 338 (393)
T COG1092 281 LRKAERRGEKFDLIILDPPSFARSKKQE----FSAQRDYKDLNDLALRLL-APGGTLVTSSCS 338 (393)
T ss_pred HHHHHhcCCcccEEEECCcccccCcccc----hhHHHHHHHHHHHHHHHc-CCCCEEEEEecC
Confidence 3445554 3999999999999886532 333333334443333332 333444444333
No 330
>PRK06193 hypothetical protein; Provisional
Probab=36.83 E-value=76 Score=21.62 Aligned_cols=30 Identities=23% Similarity=0.212 Sum_probs=22.5
Q ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEEEcH
Q 044507 75 TCFHVIGDLVGLIDTVAPNDEKVFVVGHDW 104 (157)
Q Consensus 75 ~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~ 104 (157)
..+....++..+++.+....+++.+|||..
T Consensus 136 ~~~~y~~~l~~~I~~l~~~~~~vLlVgHnp 165 (206)
T PRK06193 136 RNALLKAGLRPLLTTPPDPGTNTVLVGHDD 165 (206)
T ss_pred hHHHHHHHHHHHHhhCCCCCCeEEEEeCch
Confidence 344456778888888765667899999985
No 331
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=36.80 E-value=56 Score=23.99 Aligned_cols=24 Identities=8% Similarity=0.081 Sum_probs=18.9
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcC
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFR 116 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~ 116 (157)
+..+-.+.|-|.|+.++..++...
T Consensus 94 gl~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 94 QLLPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCC
Confidence 445567999999999998887643
No 332
>PRK14974 cell division protein FtsY; Provisional
Probab=36.62 E-value=1.8e+02 Score=21.60 Aligned_cols=69 Identities=14% Similarity=0.060 Sum_probs=40.0
Q ss_pred HHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCc--cceeEE
Q 044507 46 ALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRP--DRVKAL 123 (157)
Q Consensus 46 ~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~--~~~~~~ 123 (157)
.....++.++.+|-.|.... ......++..+.+.. .+..++++..+.-|.-+...+..+. -.+.++
T Consensus 217 ~~~~~~~DvVLIDTaGr~~~----------~~~lm~eL~~i~~~~--~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~gi 284 (336)
T PRK14974 217 HAKARGIDVVLIDTAGRMHT----------DANLMDELKKIVRVT--KPDLVIFVGDALAGNDAVEQAREFNEAVGIDGV 284 (336)
T ss_pred HHHhCCCCEEEEECCCccCC----------cHHHHHHHHHHHHhh--CCceEEEeeccccchhHHHHHHHHHhcCCCCEE
Confidence 33445788888988755432 223355565555555 4456667766666666665555432 235666
Q ss_pred EEe
Q 044507 124 VNL 126 (157)
Q Consensus 124 i~~ 126 (157)
|+-
T Consensus 285 IlT 287 (336)
T PRK14974 285 ILT 287 (336)
T ss_pred EEe
Confidence 664
No 333
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=36.18 E-value=1.5e+02 Score=20.78 Aligned_cols=38 Identities=21% Similarity=0.263 Sum_probs=24.0
Q ss_pred CCCEEEEeCCCCCchhh-HHHHHHHHHhCCCE-EEecCCC
Q 044507 23 QGPVILFLHGFPELWYS-WRHQITALASLGYR-AVAPDLR 60 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~-~~~~~~~l~~~g~~-v~~~d~~ 60 (157)
..|.|++++-..+.... .....+.+.+.|+. +..++.+
T Consensus 27 ~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 27 EDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 45788999866655443 35556677778874 4455553
No 334
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=35.89 E-value=86 Score=21.95 Aligned_cols=23 Identities=22% Similarity=0.010 Sum_probs=19.0
Q ss_pred cEEEEEEcHHHHHHHHHHhcCcc
Q 044507 96 KVFVVGHDWGAFMAWFLCLFRPD 118 (157)
Q Consensus 96 ~i~l~G~S~Gg~~a~~~~~~~~~ 118 (157)
-=.+.|-|.|+.++..++...+.
T Consensus 28 fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 28 FDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred CCEEEEECHHHHhHHHHHhCCcc
Confidence 45899999999999998886543
No 335
>PF09695 YtfJ_HI0045: Bacterial protein of unknown function (YtfJ_HI0045); InterPro: IPR006513 These are sequences from gammaproteobacteria that are related to the Escherichia coli protein, YtfJ.
Probab=35.75 E-value=1.2e+02 Score=19.83 Aligned_cols=46 Identities=17% Similarity=0.099 Sum_probs=32.2
Q ss_pred eeEEEECCEEEEEeecCC----CC--EEEEeCCCCCchhhHHHHHHHHHhCC
Q 044507 6 HRIVKVNGINMHIAEKGQ----GP--VILFLHGFPELWYSWRHQITALASLG 51 (157)
Q Consensus 6 ~~~~~~~g~~~~~~~~~~----~p--~vl~~hG~~~~~~~~~~~~~~l~~~g 51 (157)
...+.+++..+.|..+.+ +. +|..+.|-........++.+.+.++.
T Consensus 15 ~Gel~l~~~~~~y~~W~s~~l~GKVrviq~iAGr~sake~N~~l~~aik~a~ 66 (160)
T PF09695_consen 15 KGELILNGDKISYQPWNSAQLPGKVRVIQHIAGRSSAKEMNAPLIEAIKAAK 66 (160)
T ss_pred CceEEEcCCcccccccCccccCCCEEEEEEeccCCchhHhhHHHHHHHHHcC
Confidence 345677888888887763 33 44445567777788889988888763
No 336
>KOG0855 consensus Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=35.66 E-value=1.1e+02 Score=20.36 Aligned_cols=49 Identities=14% Similarity=0.257 Sum_probs=30.2
Q ss_pred CCEEEEEeecC-CCCEEEEeCCC------CCchhhHHHHHHHHHhCCCEEEecCCC
Q 044507 12 NGINMHIAEKG-QGPVILFLHGF------PELWYSWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 12 ~g~~~~~~~~~-~~p~vl~~hG~------~~~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
||..+...... ++|+|+|+-.. .-....|+.--+.+.+.|+.|+.+..-
T Consensus 78 dg~sisLkkit~nk~vV~f~YP~asTPGCTkQaCgFRDnY~k~kka~aeV~GlS~D 133 (211)
T KOG0855|consen 78 DGKSISLKKITGNKPVVLFFYPAASTPGCTKQACGFRDNYEKFKKAGAEVIGLSGD 133 (211)
T ss_pred CCCeeeeeeecCCCcEEEEEeccCCCCCcccccccccccHHHHhhcCceEEeeccC
Confidence 55566655433 55777776533 223444555567788888999887653
No 337
>PRK10162 acetyl esterase; Provisional
Probab=35.32 E-value=1.4e+02 Score=21.57 Aligned_cols=39 Identities=13% Similarity=-0.118 Sum_probs=27.3
Q ss_pred CEEEEeCCCCCc-hhhHHHHHHHHHhCCCEEEecCCCCCC
Q 044507 25 PVILFLHGFPEL-WYSWRHQITALASLGYRAVAPDLRGFG 63 (157)
Q Consensus 25 p~vl~~hG~~~~-~~~~~~~~~~l~~~g~~v~~~d~~g~g 63 (157)
|++++++|.... ..+-..+.+.|.+.|..+-...++|..
T Consensus 249 Pp~~i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~~ 288 (318)
T PRK10162 249 PPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTL 288 (318)
T ss_pred CCeEEEecCCCcCcChHHHHHHHHHHcCCCEEEEEECCCc
Confidence 778888876543 234567788899999877777666643
No 338
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=35.32 E-value=72 Score=20.65 Aligned_cols=32 Identities=22% Similarity=0.095 Sum_probs=21.4
Q ss_pred EeCCCCCc--hhhHHHHHHHHHhCCCEEEecCCC
Q 044507 29 FLHGFPEL--WYSWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 29 ~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
+..+-||. ...-..++..|+++|++|+++|.-
T Consensus 3 v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 3 VTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 34444443 344466788899999999999983
No 339
>TIGR02540 gpx7 putative glutathione peroxidase Gpx7. This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.
Probab=34.77 E-value=1.2e+02 Score=19.08 Aligned_cols=57 Identities=9% Similarity=0.055 Sum_probs=32.9
Q ss_pred EEECCEEEEEeecCCCCEEEEeCCCCCc--hhhH---HHHHHHHHhCCCEEEecCCCCCCCC
Q 044507 9 VKVNGINMHIAEKGQGPVILFLHGFPEL--WYSW---RHQITALASLGYRAVAPDLRGFGDT 65 (157)
Q Consensus 9 ~~~~g~~~~~~~~~~~p~vl~~hG~~~~--~~~~---~~~~~~l~~~g~~v~~~d~~g~g~s 65 (157)
...+|..+.......+++||+.-..++. ...+ ..+.+.+..+|+.++.++..-+|.+
T Consensus 8 ~~~~G~~~~l~~~~Gk~vvv~~~as~C~~c~~~~~~l~~l~~~~~~~~~~v~~i~~~~~~~~ 69 (153)
T TIGR02540 8 KDARGRTVSLEKYRGKVSLVVNVASECGFTDQNYRALQELHRELGPSHFNVLAFPCNQFGES 69 (153)
T ss_pred ECCCCCEecHHHhCCCEEEEEEeCCCCCchhhhHHHHHHHHHHHhhCCeEEEEEeccccccC
Confidence 3457777666555555655554433332 2222 3455666667899999886545544
No 340
>PF01221 Dynein_light: Dynein light chain type 1 ; InterPro: IPR001372 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella. The cytoplasmic isoform of dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein is composed of a number of ATP-binding large subunits (see IPR004273 from INTERPRO), intermediate size subunits and small subunits. Among the small subunits, there is a family of highly conserved proteins which make up this family [, ]. Both type 1 (DLC1) and 2 (DLC2) dynein light chains have a similar two-layer alpha-beta core structure consisting of beta-alpha(2)-beta-X-beta(2) [, ].; GO: 0007017 microtubule-based process, 0005875 microtubule associated complex; PDB: 1F95_A 1F96_A 1F3C_A 3P8M_B 2XQQ_C 1RE6_A 1CMI_A 1PWK_A 1PWJ_A 4DS1_C ....
Probab=34.70 E-value=32 Score=19.68 Aligned_cols=33 Identities=12% Similarity=0.105 Sum_probs=22.1
Q ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHH
Q 044507 75 TCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFM 108 (157)
Q Consensus 75 ~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~ 108 (157)
+..+.+..|.+.++......-.+ ++|.|+|+.+
T Consensus 34 ~~~eiA~~iK~~lD~~yG~~Wh~-IVG~~Fg~~~ 66 (89)
T PF01221_consen 34 DEKEIAEFIKQELDKKYGPTWHC-IVGKSFGSSV 66 (89)
T ss_dssp SHHHHHHHHHHHHHHHHSS-EEE-EEESEEEEEE
T ss_pred cHHHHHHHHHHHHhcccCCceEE-EECCcEEEEE
Confidence 34567777888888765555566 5788998643
No 341
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=34.65 E-value=1.5e+02 Score=20.55 Aligned_cols=47 Identities=17% Similarity=0.214 Sum_probs=24.8
Q ss_pred HHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEE
Q 044507 41 RHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVV 100 (157)
Q Consensus 41 ~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~ 100 (157)
+.+++.|.++|+.|..+...- ..+.....+.|...++.. +.+.+.++
T Consensus 52 Rhfa~~L~~~G~~V~Y~~~~~-----------~~~~~s~~~~L~~~~~~~--~~~~~~~~ 98 (224)
T PF04244_consen 52 RHFADELRAKGFRVHYIELDD-----------PENTQSFEDALARALKQH--GIDRLHVM 98 (224)
T ss_dssp HHHHHHHHHTT--EEEE-TT------------TT--SSHHHHHHHHHHHH------EEEE
T ss_pred HHHHHHHHhCCCEEEEEeCCC-----------ccccccHHHHHHHHHHHc--CCCEEEEE
Confidence 567899999999999888741 111112455666667666 55566555
No 342
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=34.56 E-value=62 Score=23.70 Aligned_cols=33 Identities=6% Similarity=0.047 Sum_probs=22.5
Q ss_pred cEEEEEEcHHHHHHHHHHhcCccceeEEEEeec
Q 044507 96 KVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSV 128 (157)
Q Consensus 96 ~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~ 128 (157)
+++++|-+++|..++..+.+....-..+++++.
T Consensus 1 ~vvIiGgG~aG~~~a~~l~~~~~~~~~I~li~~ 33 (364)
T TIGR03169 1 HLVLIGGGHTHALVLRRWAMKPLPGVRVTLINP 33 (364)
T ss_pred CEEEECCcHHHHHHHHHhcCcCCCCCEEEEECC
Confidence 588999999998887777543222245666653
No 343
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=34.47 E-value=1e+02 Score=21.65 Aligned_cols=34 Identities=21% Similarity=0.138 Sum_probs=25.6
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecC
Q 044507 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPD 58 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 58 (157)
..|+++.|-|.+..+=--.+++|.++|+.|.++-
T Consensus 61 ~~V~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 61 PRVLLVCGPGNNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred CeEEEEECCCCCchhHHHHHHHHHHCCCeEEEEE
Confidence 4677788887776666667889999999886554
No 344
>COG4425 Predicted membrane protein [Function unknown]
Probab=34.33 E-value=1.1e+02 Score=23.97 Aligned_cols=56 Identities=13% Similarity=0.116 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHhCC-CCCcEEEEEEcHHHHHHHHHHhc-Cc--cceeEEEEeecccC
Q 044507 76 CFHVIGDLVGLIDTVAP-NDEKVFVVGHDWGAFMAWFLCLF-RP--DRVKALVNLSVVFN 131 (157)
Q Consensus 76 ~~~~~~~l~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~-~~--~~~~~~i~~~~~~~ 131 (157)
.+...+.+.....++.. ...|.++.|.|.|++-.-.-... +. ..+++...-+|++.
T Consensus 377 a~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~~s~~~s~dl~dvl~dfdGaLwSGppf~ 436 (588)
T COG4425 377 ARALFEAVYGYWTQLPKSSRPKLYLHGESLGAMGSEAPSMDLFDVLGDFDGALWSGPPFN 436 (588)
T ss_pred HHHHHHHHHHHHHhCCcCCCCceEEeccccccccCccccccHHHHHhhcccceecCCCCC
Confidence 33455566666666654 35789999999998765431111 10 12566666555544
No 345
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=34.10 E-value=1.5e+02 Score=19.92 Aligned_cols=73 Identities=16% Similarity=0.141 Sum_probs=44.4
Q ss_pred HHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCcc--c
Q 044507 42 HQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPD--R 119 (157)
Q Consensus 42 ~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~--~ 119 (157)
...+.+.++++.++.+|-+|.... ......++.++++.. ....+.++-.+..+.-.+..+..+-+ .
T Consensus 74 ~~l~~~~~~~~D~vlIDT~Gr~~~----------d~~~~~el~~~~~~~--~~~~~~LVlsa~~~~~~~~~~~~~~~~~~ 141 (196)
T PF00448_consen 74 EALEKFRKKGYDLVLIDTAGRSPR----------DEELLEELKKLLEAL--NPDEVHLVLSATMGQEDLEQALAFYEAFG 141 (196)
T ss_dssp HHHHHHHHTTSSEEEEEE-SSSST----------HHHHHHHHHHHHHHH--SSSEEEEEEEGGGGGHHHHHHHHHHHHSS
T ss_pred HHHHHHhhcCCCEEEEecCCcchh----------hHHHHHHHHHHhhhc--CCccceEEEecccChHHHHHHHHHhhccc
Confidence 345566667899999998765533 234566777777777 45566666555555555554444322 3
Q ss_pred eeEEEEe
Q 044507 120 VKALVNL 126 (157)
Q Consensus 120 ~~~~i~~ 126 (157)
+.++|+-
T Consensus 142 ~~~lIlT 148 (196)
T PF00448_consen 142 IDGLILT 148 (196)
T ss_dssp TCEEEEE
T ss_pred CceEEEE
Confidence 6777763
No 346
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=33.95 E-value=1.9e+02 Score=21.10 Aligned_cols=76 Identities=13% Similarity=0.155 Sum_probs=44.1
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCC----CCC--CCCCCC---------------CCCCCCCHHHHHHHH
Q 044507 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPDL----RGF--GDTDAP---------------PDVTSYTCFHVIGDL 83 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~----~g~--g~s~~~---------------~~~~~~~~~~~~~~l 83 (157)
+.||++-|-.++.-.- ++-.|++++..++..|- +|. |...+. .....++..++..+.
T Consensus 4 ~~ii~I~GpTasGKS~--LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a 81 (300)
T PRK14729 4 NKIVFIFGPTAVGKSN--ILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEA 81 (300)
T ss_pred CcEEEEECCCccCHHH--HHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHH
Confidence 3467777776654433 33355555457888874 332 333221 123568888888888
Q ss_pred HHHHHHhCCCCCcEEEEEE
Q 044507 84 VGLIDTVAPNDEKVFVVGH 102 (157)
Q Consensus 84 ~~~~~~~~~~~~~i~l~G~ 102 (157)
.+.++.+.......+++|-
T Consensus 82 ~~~i~~i~~~gk~PilvGG 100 (300)
T PRK14729 82 LKIIKELRQQKKIPIFVGG 100 (300)
T ss_pred HHHHHHHHHCCCCEEEEeC
Confidence 8888876543344455554
No 347
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=33.93 E-value=1.1e+02 Score=21.44 Aligned_cols=20 Identities=30% Similarity=0.240 Sum_probs=17.1
Q ss_pred EEEEEcHHHHHHHHHHhcCc
Q 044507 98 FVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 98 ~l~G~S~Gg~~a~~~~~~~~ 117 (157)
.+.|-|.|+.++..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999998887654
No 348
>PRK03094 hypothetical protein; Provisional
Probab=33.87 E-value=60 Score=18.46 Aligned_cols=21 Identities=29% Similarity=0.253 Sum_probs=16.7
Q ss_pred hHHHHHHHHHhCCCEEEecCC
Q 044507 39 SWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 39 ~~~~~~~~l~~~g~~v~~~d~ 59 (157)
+...+.+.|.++||.|+-++.
T Consensus 9 ~Ls~i~~~L~~~GYeVv~l~~ 29 (80)
T PRK03094 9 SLTDVQQALKQKGYEVVQLRS 29 (80)
T ss_pred CcHHHHHHHHHCCCEEEecCc
Confidence 345678899999999987753
No 349
>KOG4153 consensus Fructose 1,6-bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=33.76 E-value=96 Score=22.21 Aligned_cols=33 Identities=24% Similarity=0.188 Sum_probs=20.3
Q ss_pred CCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecC
Q 044507 23 QGPVILFLHGFPELWYSWRHQITALASLGYRAVAPD 58 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 58 (157)
++|+.+.+||..++..+- ++...+.|..=+-+|
T Consensus 256 ~KpvFlVfHGgSGssvne---fktgIenGVvKvNvd 288 (358)
T KOG4153|consen 256 KKPVFLVFHGGSGSSVNE---FKTGIENGVVKVNVD 288 (358)
T ss_pred cCceEEEEeCCCCccHHH---HHHHHhcCeEEEeec
Confidence 568899999988765443 334455554444433
No 350
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=33.48 E-value=58 Score=18.52 Aligned_cols=21 Identities=24% Similarity=0.260 Sum_probs=17.1
Q ss_pred hHHHHHHHHHhCCCEEEecCC
Q 044507 39 SWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 39 ~~~~~~~~l~~~g~~v~~~d~ 59 (157)
....+.+.|.++||.|+-++-
T Consensus 9 ~Ls~v~~~L~~~GyeVv~l~~ 29 (80)
T PF03698_consen 9 GLSNVKEALREKGYEVVDLEN 29 (80)
T ss_pred CchHHHHHHHHCCCEEEecCC
Confidence 345678899999999998874
No 351
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=33.40 E-value=95 Score=24.36 Aligned_cols=39 Identities=15% Similarity=0.081 Sum_probs=30.8
Q ss_pred CCCEEEEeCCCCCc--hhhHHHHHHHHHhCCCEEEecCCCC
Q 044507 23 QGPVILFLHGFPEL--WYSWRHQITALASLGYRAVAPDLRG 61 (157)
Q Consensus 23 ~~p~vl~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g 61 (157)
..|+||++.|+-+. ......+...+..+|+.|+.+..|.
T Consensus 38 ~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 38 GFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 45899999998654 4556788889999999999887763
No 352
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism]
Probab=33.22 E-value=80 Score=21.68 Aligned_cols=40 Identities=15% Similarity=0.076 Sum_probs=32.5
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHh
Q 044507 73 SYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCL 114 (157)
Q Consensus 73 ~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~ 114 (157)
.++-.+|+..++++++.+ +..+.=++|-++|=.+..+...
T Consensus 72 Af~d~dWI~KLcs~~kkl--d~mkkkvlGICFGHQiiara~G 111 (245)
T KOG3179|consen 72 AFSDADWIKKLCSFVKKL--DFMKKKVLGICFGHQIIARAKG 111 (245)
T ss_pred ccccchHHHHHHHHHHHH--HhhccceEEEeccHHHHHHhhC
Confidence 455677999999999998 6667888999999988877654
No 353
>KOG3062 consensus RNA polymerase II elongator associated protein [General function prediction only]
Probab=33.13 E-value=1.8e+02 Score=20.60 Aligned_cols=74 Identities=18% Similarity=0.108 Sum_probs=38.9
Q ss_pred EEEEeCCCCCchhhH--HHHHHHHHhCC--CEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEE
Q 044507 26 VILFLHGFPELWYSW--RHQITALASLG--YRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVV 100 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~--~~~~~~l~~~g--~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~ 100 (157)
++|++.|.+++...- ..+.+.|.++| +.|..+|--..|......-...........++...+++-. ....++++
T Consensus 2 pLVvi~G~P~SGKstrA~~L~~~l~~~~~K~~v~ii~deslg~~~ns~y~~s~~EK~lRg~L~S~v~R~L-sk~~iVI~ 79 (281)
T KOG3062|consen 2 PLVVICGLPCSGKSTRAVELREALKERGTKQSVRIIDDESLGIEKNSNYGDSQAEKALRGKLRSAVDRSL-SKGDIVIV 79 (281)
T ss_pred CeEEEeCCCCCCchhHHHHHHHHHHhhcccceEEEechhhcCCCCcccccccHHHHHHHHHHHHHHHhhc-ccCcEEEE
Confidence 577888998775554 56778888876 4666666544443322110011222334445555555421 33445544
No 354
>PLN02412 probable glutathione peroxidase
Probab=32.90 E-value=1.4e+02 Score=19.28 Aligned_cols=52 Identities=8% Similarity=0.043 Sum_probs=31.2
Q ss_pred ECCEEEEEeecCCCCEEEEeCCCCCch-----hhHHHHHHHHHhCCCEEEecCCCCC
Q 044507 11 VNGINMHIAEKGQGPVILFLHGFPELW-----YSWRHQITALASLGYRAVAPDLRGF 62 (157)
Q Consensus 11 ~~g~~~~~~~~~~~p~vl~~hG~~~~~-----~~~~~~~~~l~~~g~~v~~~d~~g~ 62 (157)
.+|..+.......+++||.+....+.. .....+.+.+.++|+.|+.+....+
T Consensus 17 ~~G~~v~l~~~~gk~vlv~f~a~~C~~c~~e~~~l~~l~~~~~~~g~~vvgv~~~~~ 73 (167)
T PLN02412 17 IGGNDVSLNQYKGKVLLIVNVASKCGLTDSNYKELNVLYEKYKEQGFEILAFPCNQF 73 (167)
T ss_pred CCCCEEeHHHhCCCEEEEEEeCCCCCChHHHHHHHHHHHHHHhhCCcEEEEeccccc
Confidence 567666655444456666665444322 1234456667777899999886533
No 355
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=32.89 E-value=93 Score=20.81 Aligned_cols=31 Identities=6% Similarity=0.056 Sum_probs=18.0
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCcEEEEEEcH
Q 044507 74 YTCFHVIGDLVGLIDTVAPNDEKVFVVGHDW 104 (157)
Q Consensus 74 ~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~ 104 (157)
.+...+...+..+.........++.++|.|.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~iv~lGDSi 42 (214)
T cd01820 12 DGDPRWMSRHERFVAEAKQKEPDVVFIGDSI 42 (214)
T ss_pred ccchhHHHHHHHHHHHhhcCCCCEEEECchH
Confidence 3345555566666655544456677777764
No 356
>PF00148 Oxidored_nitro: Nitrogenase component 1 type Oxidoreductase; InterPro: IPR000510 Enzymes belonging to this family include cofactor-requiring nitrogenases and protochlorophyllide reductase. The key enzymatic reactions in nitrogen fixation are catalysed by the nitrogenase complex, which has two components, the iron protein (component 2), and a component (component 1) which is either a molybdenum-iron, vanadium-iron or iron-iron protein. The enzyme (1.18.6.1 from EC) forms a hexamer of two alpha, two beta and two delta chains. Protochlorophyllide reductase (1.3.1.33 from EC) is involved in the light-dependent accumulation of chlorophyll, probably at the step of reduction of protochlorophyllide to chlorophyllide.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QH1_C 1QH8_A 1H1L_C 1QGU_A 3AEK_C 3AET_C 3AER_C 3AEU_A 3AES_C 3AEQ_C ....
Probab=32.83 E-value=1.1e+02 Score=22.84 Aligned_cols=62 Identities=13% Similarity=0.075 Sum_probs=35.6
Q ss_pred hhhHHHHHHHHHhC-CCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-H-HhCCCCCcEEEEEEcH
Q 044507 37 WYSWRHQITALASL-GYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLI-D-TVAPNDEKVFVVGHDW 104 (157)
Q Consensus 37 ~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~i~l~G~S~ 104 (157)
.++...+++.+.++ |..++.++.+|+..+. ....+.....+.+.+ + .-......++++|.+.
T Consensus 90 GdD~~~v~~~~~~~~~~~vi~v~~~gf~~~~------~~G~~~a~~~l~~~~~~~~~~~~~~~VNiiG~~~ 154 (398)
T PF00148_consen 90 GDDIEAVARELQEEYGIPVIPVHTPGFSGSY------SQGYDAALRALAEQLVKPPEEKKPRSVNIIGGSP 154 (398)
T ss_dssp TTTHHHHHHHHHHHHSSEEEEEE--TTSSSH------HHHHHHHHHHHHHHHTTGTTTTSSSEEEEEEEST
T ss_pred CCCHHHHHHHhhcccCCcEEEEECCCccCCc------cchHHHHHHHHHhhcccccccCCCCceEEecCcC
Confidence 45677788888865 6799999999883331 112222333333333 1 2222457899999983
No 357
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=32.78 E-value=2e+02 Score=21.46 Aligned_cols=46 Identities=15% Similarity=0.109 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEcHHH--HHHHHHHhcCccceeEEEEee
Q 044507 80 IGDLVGLIDTVAPNDEKVFVVGHDWGA--FMAWFLCLFRPDRVKALVNLS 127 (157)
Q Consensus 80 ~~~l~~~~~~~~~~~~~i~l~G~S~Gg--~~a~~~~~~~~~~~~~~i~~~ 127 (157)
...+..+++.+ ...+++++|.|-=- -+=..++..+|++|.++..=+
T Consensus 265 ~~~l~nil~~~--p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRd 312 (373)
T COG4850 265 GQSLRNILRRY--PDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRD 312 (373)
T ss_pred ccHHHHHHHhC--CCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeee
Confidence 33466677776 77899999998422 233456778999999875544
No 358
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=32.48 E-value=84 Score=19.74 Aligned_cols=40 Identities=20% Similarity=0.179 Sum_probs=22.8
Q ss_pred EEEEeCCCCCchh--hHHHHHHHHHhCCCEEEecCCCCCCCC
Q 044507 26 VILFLHGFPELWY--SWRHQITALASLGYRAVAPDLRGFGDT 65 (157)
Q Consensus 26 ~vl~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~g~s 65 (157)
++|.+-|.-++.- --..+++.|.++|+++.++=.-++|..
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~ 42 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQF 42 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTST
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCc
Confidence 3556667654433 347788899999998875544445443
No 359
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=32.03 E-value=73 Score=26.06 Aligned_cols=37 Identities=24% Similarity=0.277 Sum_probs=28.4
Q ss_pred CCCEEEEeCCCCCc----------hhhHHHHHHHHHhCCCEEEecCC
Q 044507 23 QGPVILFLHGFPEL----------WYSWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 23 ~~p~vl~~hG~~~~----------~~~~~~~~~~l~~~g~~v~~~d~ 59 (157)
++-+||+.|..... ...+....+.|.++||.++.++-
T Consensus 47 ~~~~VL~YH~V~d~~~~~~~~~Vspe~Fe~qL~~Lk~nGY~~ISl~e 93 (671)
T PRK14582 47 NGFVAIAYHDVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSVAQ 93 (671)
T ss_pred CceEEEEeCcccCCcccccccccCHHHHHHHHHHHHHCcCEEccHHH
Confidence 44689999987532 23567788999999999999873
No 360
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=31.81 E-value=1e+02 Score=22.76 Aligned_cols=35 Identities=14% Similarity=-0.055 Sum_probs=28.3
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCC
Q 044507 26 VILFLHGFPELWYSWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
.+++..|..|+......+++.|.++|+.|...-..
T Consensus 3 Il~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~ 37 (401)
T cd03784 3 VLITTIGSRGDVQPLVALAWALRAAGHEVRVATPP 37 (401)
T ss_pred EEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCH
Confidence 45667788888888899999999999988776553
No 361
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=31.81 E-value=71 Score=15.63 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=21.2
Q ss_pred CCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 044507 50 LGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDT 89 (157)
Q Consensus 50 ~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~ 89 (157)
.+|.+.+||+||.-. ...+.++....+.+.+..
T Consensus 12 ~~y~~~~pdlpg~~t-------~G~t~eea~~~~~eal~~ 44 (48)
T PF03681_consen 12 GGYVAYFPDLPGCFT-------QGDTLEEALENAKEALEL 44 (48)
T ss_dssp SSEEEEETTCCTCEE-------EESSHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChhh-------cCCCHHHHHHHHHHHHHH
Confidence 468899999987542 233466666666666543
No 362
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=31.66 E-value=1e+02 Score=22.16 Aligned_cols=34 Identities=38% Similarity=0.609 Sum_probs=23.2
Q ss_pred CCEEEEeCCCCCc-----hhhHHHHHHHHHhCCCEEEec
Q 044507 24 GPVILFLHGFPEL-----WYSWRHQITALASLGYRAVAP 57 (157)
Q Consensus 24 ~p~vl~~hG~~~~-----~~~~~~~~~~l~~~g~~v~~~ 57 (157)
++.++++||.... .+.|..+++.+.++|+.++..
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~ 216 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLP 216 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEe
Confidence 4567778886533 234677788888888887653
No 363
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=31.60 E-value=64 Score=21.97 Aligned_cols=16 Identities=31% Similarity=0.443 Sum_probs=12.4
Q ss_pred HHHHHhCCCEEEecCC
Q 044507 44 ITALASLGYRAVAPDL 59 (157)
Q Consensus 44 ~~~l~~~g~~v~~~d~ 59 (157)
+..|+++|+.|+.+|.
T Consensus 49 a~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 49 LAWLAEQGHRVLGVEL 64 (213)
T ss_pred HHHHHhCCCeEEEEeC
Confidence 5566778888888886
No 364
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.15 E-value=1.2e+02 Score=22.08 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhCC--CCCcEEEEEEc--HHHHHHHHHHhc
Q 044507 80 IGDLVGLIDTVAP--NDEKVFVVGHD--WGAFMAWFLCLF 115 (157)
Q Consensus 80 ~~~l~~~~~~~~~--~~~~i~l~G~S--~Gg~~a~~~~~~ 115 (157)
...+.+++++... ...++.++|.| +|..++.++...
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 3456667776543 56899999997 899998888764
No 365
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=30.93 E-value=60 Score=23.61 Aligned_cols=35 Identities=14% Similarity=0.069 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhc
Q 044507 79 VIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
+..++.++++.+. ...+.++|-|+|+++++.....
T Consensus 120 YW~El~~i~~w~~--~~~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 120 YWDELKEILDWAK--THVTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred hHHHHHHHHHHHH--HcCCCEEEEcHHHHHHHHHcCC
Confidence 3555777777773 3367889999999998877664
No 366
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=30.77 E-value=93 Score=22.61 Aligned_cols=23 Identities=22% Similarity=0.166 Sum_probs=18.3
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhc
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
+..+-.+.|-|.|+.++..++..
T Consensus 95 ~l~~~~i~GtSaGAi~aa~~~~~ 117 (298)
T cd07206 95 DLLPRVISGSSAGAIVAALLGTH 117 (298)
T ss_pred CCCCCEEEEEcHHHHHHHHHHcC
Confidence 34456799999999999888764
No 367
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=30.48 E-value=1.2e+02 Score=17.81 Aligned_cols=42 Identities=31% Similarity=0.322 Sum_probs=27.2
Q ss_pred CCEEEEeCCCCCchhhHHHHHHHHHhC-CCEEEecCCCCCCCC
Q 044507 24 GPVILFLHGFPELWYSWRHQITALASL-GYRAVAPDLRGFGDT 65 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s 65 (157)
.+++|++.+.......+..-....... +-+++..+-.|||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~ 76 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVY 76 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCccee
Confidence 378999998876655554333222222 367888888888876
No 368
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=30.34 E-value=82 Score=25.01 Aligned_cols=24 Identities=17% Similarity=0.120 Sum_probs=19.6
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcC
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFR 116 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~ 116 (157)
+.++-.++|||+|=..++..+.-.
T Consensus 263 GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 263 AIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred CCCCCEEeecCHHHHHHHHHhCCC
Confidence 678889999999988887766644
No 369
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.11 E-value=2.6e+02 Score=21.59 Aligned_cols=59 Identities=7% Similarity=0.009 Sum_probs=29.8
Q ss_pred HHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhc
Q 044507 45 TALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 45 ~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
+.+.+.+|.++.+|-.|.... .....+++.+..+.+ .+..++++=.+.=|..|...+..
T Consensus 177 ~~fKke~fdvIIvDTSGRh~q----------e~sLfeEM~~v~~ai--~Pd~vi~VmDasiGQaae~Qa~a 235 (483)
T KOG0780|consen 177 DRFKKENFDVIIVDTSGRHKQ----------EASLFEEMKQVSKAI--KPDEIIFVMDASIGQAAEAQARA 235 (483)
T ss_pred HHHHhcCCcEEEEeCCCchhh----------hHHHHHHHHHHHhhc--CCCeEEEEEeccccHhHHHHHHH
Confidence 455666777777776543222 222344555555555 44555554444444444444443
No 370
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=29.97 E-value=1.2e+02 Score=17.81 Aligned_cols=50 Identities=12% Similarity=0.186 Sum_probs=30.4
Q ss_pred EECCEEEEEeecCCCCEEEEeCCC-CCchh-----hHHHHHHHHHhCCCEEEecCC
Q 044507 10 KVNGINMHIAEKGQGPVILFLHGF-PELWY-----SWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 10 ~~~g~~~~~~~~~~~p~vl~~hG~-~~~~~-----~~~~~~~~l~~~g~~v~~~d~ 59 (157)
+.+|..+....-.++|+||++-.. .+... .+..+.+.+.++|+.++.+..
T Consensus 12 ~~~g~~~~l~~l~gk~~vl~f~~~~~c~~c~~~l~~l~~~~~~~~~~~~~vi~is~ 67 (124)
T PF00578_consen 12 DSDGKTVSLSDLKGKPVVLFFWPTAWCPFCQAELPELNELYKKYKDKGVQVIGIST 67 (124)
T ss_dssp TTTSEEEEGGGGTTSEEEEEEESTTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEES
T ss_pred CCCCCEEEHHHHCCCcEEEEEeCccCccccccchhHHHHHhhhhccceEEeeeccc
Confidence 346777777666566766665444 43322 223445566667889988875
No 371
>cd01917 ACS_2 Acetyl-CoA synthase (ACS), also known as acetyl-CoA decarbonylase, is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA. ACS forms a heterotetramer with carbon monoxide dehydrogenase (CODH) consisting of two ACS and two CODH subunits. CODH reduces carbon dioxide to carbon monoxide and ACS then synthesizes acetyl-CoA from carbon monoxide, CoA, and a methyl group donated by another protein (CoFeSP). ACS has three structural domains, an N-terminal rossman fold domain with a helical region at its N-terminus which interacts with CODH, and two alpha + beta fold domains. A Ni-Fe-S center referred to as the A-cluster is located in the C-terminal domain. A large cavity exists between the three domains which may bind CoA.
Probab=29.68 E-value=1.6e+02 Score=21.28 Aligned_cols=37 Identities=14% Similarity=0.037 Sum_probs=30.4
Q ss_pred CCCCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecC
Q 044507 22 GQGPVILFLHGFPELWYSWRHQITALASLGYRAVAPD 58 (157)
Q Consensus 22 ~~~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 58 (157)
|+.|-++.+=|...+...-..+++.+.++++-+++..
T Consensus 125 G~IPGva~ivG~a~~~e~~~~I~~e~q~r~~lv~l~G 161 (287)
T cd01917 125 WTIPGEAVILGRAKDSKALKKIVDDLMGRGFMLFLCD 161 (287)
T ss_pred CCCCeEEEEEecCCChHHHHHHHHHHHHCCcEEEEec
Confidence 3568777777887777888899999999999888876
No 372
>PRK05665 amidotransferase; Provisional
Probab=29.25 E-value=1.2e+02 Score=21.15 Aligned_cols=38 Identities=13% Similarity=-0.038 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHh
Q 044507 75 TCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCL 114 (157)
Q Consensus 75 ~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~ 114 (157)
+...++..+.++++.+.. .++=++|.|+|..+....+.
T Consensus 72 ~~~pwi~~l~~~i~~~~~--~~~PilGIC~GhQlla~AlG 109 (240)
T PRK05665 72 GTDPWIQTLKTYLLKLYE--RGDKLLGVCFGHQLLALLLG 109 (240)
T ss_pred ccchHHHHHHHHHHHHHh--cCCCEEEEeHHHHHHHHHhC
Confidence 344577778888877632 34458999999988776653
No 373
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=29.04 E-value=2.4e+02 Score=21.20 Aligned_cols=64 Identities=16% Similarity=0.121 Sum_probs=36.2
Q ss_pred HHHHHHHHhCCCEEEecCCCCC------------CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHH
Q 044507 41 RHQITALASLGYRAVAPDLRGF------------GDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFM 108 (157)
Q Consensus 41 ~~~~~~l~~~g~~v~~~d~~g~------------g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~ 108 (157)
..+++.|.++|+.+..+-+... --|..+-++ . ..+.....++.+ -..++=++|-|+|=.+
T Consensus 191 ~nIlr~L~~rg~~vtVVP~~t~~eeIl~~~pDGiflSNGPGDP--~----~~~~~i~~ik~l--~~~~iPifGICLGHQl 262 (368)
T COG0505 191 RNILRELVKRGCRVTVVPADTSAEEILALNPDGIFLSNGPGDP--A----PLDYAIETIKEL--LGTKIPIFGICLGHQL 262 (368)
T ss_pred HHHHHHHHHCCCeEEEEcCCCCHHHHHhhCCCEEEEeCCCCCh--h----HHHHHHHHHHHH--hccCCCeEEEcHHHHH
Confidence 3568899999998877654321 122333221 2 233344444444 2234468899999876
Q ss_pred HHHH
Q 044507 109 AWFL 112 (157)
Q Consensus 109 a~~~ 112 (157)
....
T Consensus 263 lalA 266 (368)
T COG0505 263 LALA 266 (368)
T ss_pred HHHh
Confidence 5544
No 374
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=28.98 E-value=1.4e+02 Score=22.85 Aligned_cols=34 Identities=18% Similarity=0.098 Sum_probs=25.3
Q ss_pred HHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCc
Q 044507 82 DLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 82 ~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~ 117 (157)
+..++...+ ...++.++|....|..+.+++....
T Consensus 4 ~~~~~~~~~--~~~~i~v~G~G~sG~a~a~~L~~~G 37 (458)
T PRK01710 4 DFNEFKKFI--KNKKVAVVGIGVSNIPLIKFLVKLG 37 (458)
T ss_pred hHHHHhhhh--cCCeEEEEcccHHHHHHHHHHHHCC
Confidence 445566666 4578999999999997777776544
No 375
>cd01979 Pchlide_reductase_N Pchlide_reductase_N: N protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=28.78 E-value=2e+02 Score=21.64 Aligned_cols=40 Identities=18% Similarity=0.259 Sum_probs=26.2
Q ss_pred CEEEEeCCCC---CchhhHHHHHHHHHhC-CCEEEecCCCCCCC
Q 044507 25 PVILFLHGFP---ELWYSWRHQITALASL-GYRAVAPDLRGFGD 64 (157)
Q Consensus 25 p~vl~~hG~~---~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~ 64 (157)
|.+|++.... --.++...+++.+.++ |..|+.++-+|+..
T Consensus 88 P~~I~V~sTCv~e~IGDDi~~v~~~~~~~~~~pvi~v~t~gf~g 131 (396)
T cd01979 88 PSVIFLIGSCTTEVIKMDLEGAAPRLSAEIGVPILVASASGLDY 131 (396)
T ss_pred CCEEEEECCCHHHHHhcCHHHHHHHHhhcCCCcEEEeeCCCccc
Confidence 6566665543 2245667777777644 78898888887743
No 376
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=28.69 E-value=68 Score=20.40 Aligned_cols=23 Identities=26% Similarity=0.228 Sum_probs=17.9
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhc
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~ 115 (157)
...--.+.|-|.||.+++.++..
T Consensus 25 ~~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 25 GERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp CCT-SEEEEECCHHHHHHHHHTC
T ss_pred CCCccEEEEcChhhhhHHHHHhC
Confidence 44567799999999999877775
No 377
>PRK13938 phosphoheptose isomerase; Provisional
Probab=28.46 E-value=1.9e+02 Score=19.48 Aligned_cols=25 Identities=20% Similarity=0.146 Sum_probs=21.6
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcCc
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~~ 117 (157)
...+|.++|.+-.+.++..++.+..
T Consensus 44 ~g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 44 AGARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred CCCEEEEEeCcHHHHHHHHHHHHcC
Confidence 5689999999999999999887653
No 378
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=28.46 E-value=79 Score=21.97 Aligned_cols=33 Identities=15% Similarity=0.258 Sum_probs=24.4
Q ss_pred EEEEeCCCCCchhh--HHHHHHHHHhCCCEEEecC
Q 044507 26 VILFLHGFPELWYS--WRHQITALASLGYRAVAPD 58 (157)
Q Consensus 26 ~vl~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d 58 (157)
++|++.|.+++... ...+++.|.+++.+++...
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~ 36 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLE 36 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccc
Confidence 57888999887544 3677888888887776554
No 379
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=28.21 E-value=1.9e+02 Score=19.52 Aligned_cols=85 Identities=19% Similarity=0.228 Sum_probs=47.0
Q ss_pred CCCEEEEeCCCCCchhhH-HHHHHHHHhC-CCEEEecCCCCCCCCCCCC-----C---CCCCCHHHHHHH-----HHHHH
Q 044507 23 QGPVILFLHGFPELWYSW-RHQITALASL-GYRAVAPDLRGFGDTDAPP-----D---VTSYTCFHVIGD-----LVGLI 87 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~~-~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~-----~---~~~~~~~~~~~~-----l~~~~ 87 (157)
..+.|+|++-.......| ..+.+.+.+. |+.+...+... ...... + ...-+....... +.+.+
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~l 107 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAIL 107 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHHH
Confidence 356899998777654444 5566777888 88888777543 111000 0 000111111211 23333
Q ss_pred HHhCCCCCcEEEEEEcHHHHHHHH
Q 044507 88 DTVAPNDEKVFVVGHDWGAFMAWF 111 (157)
Q Consensus 88 ~~~~~~~~~i~l~G~S~Gg~~a~~ 111 (157)
+.. -.+...++|.|.|+++...
T Consensus 108 ~~~--~~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 108 KAA--LERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHH--HHCCCEEEEECHhHHhhCC
Confidence 332 1245889999999988766
No 380
>COG3101 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.06 E-value=44 Score=21.32 Aligned_cols=35 Identities=26% Similarity=0.362 Sum_probs=24.5
Q ss_pred ccceeEEEECCEEEEEeecCCCC--EEEEeCCCCCch
Q 044507 3 GIQHRIVKVNGINMHIAEKGQGP--VILFLHGFPELW 37 (157)
Q Consensus 3 ~~~~~~~~~~g~~~~~~~~~~~p--~vl~~hG~~~~~ 37 (157)
++..+.+.-++-.|+.....+-| .|+|.||+..+.
T Consensus 19 eyNT~LvkG~DEPiYlPAde~vpyhri~FA~GfYaSa 55 (180)
T COG3101 19 EYNTRLVKGDDEPIYLPADEEVPYHRIVFAHGFYASA 55 (180)
T ss_pred hhcceeeeCCCcceeccCccCCCceeEEEechhHHHH
Confidence 34455666667777777666555 899999997653
No 381
>PLN03059 beta-galactosidase; Provisional
Probab=28.04 E-value=3.8e+02 Score=22.87 Aligned_cols=78 Identities=18% Similarity=0.221 Sum_probs=47.3
Q ss_pred eCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-------CCCcEEEEEE
Q 044507 30 LHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAP-------NDEKVFVVGH 102 (157)
Q Consensus 30 ~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~i~l~G~ 102 (157)
+|=.--..+.|+..++.+...|+++|..-.+-.... +.+....++- ..|+..+++-.+. -+.+.+..=+
T Consensus 51 iHY~R~~p~~W~d~L~k~Ka~GlNtV~tYV~Wn~HE-p~~G~~dF~G---~~DL~~Fl~la~e~GLyvilRpGPYIcAEw 126 (840)
T PLN03059 51 IHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHE-PSPGNYYFED---RYDLVKFIKVVQAAGLYVHLRIGPYICAEW 126 (840)
T ss_pred cccCcCCHHHHHHHHHHHHHcCCCeEEEEecccccC-CCCCeeeccc---hHHHHHHHHHHHHcCCEEEecCCcceeeee
Confidence 343445678899999999999998888554421111 1111122222 3455555554432 3578888889
Q ss_pred cHHHHHHHH
Q 044507 103 DWGAFMAWF 111 (157)
Q Consensus 103 S~Gg~~a~~ 111 (157)
.+||.-.+.
T Consensus 127 ~~GGlP~WL 135 (840)
T PLN03059 127 NFGGFPVWL 135 (840)
T ss_pred cCCCCchhh
Confidence 999877664
No 382
>PTZ00056 glutathione peroxidase; Provisional
Probab=27.90 E-value=1.5e+02 Score=19.89 Aligned_cols=51 Identities=8% Similarity=0.038 Sum_probs=28.9
Q ss_pred EECCEEEEEeecCCCCEEEEeCCCCCchh-----hHHHHHHHHHhCCCEEEecCCC
Q 044507 10 KVNGINMHIAEKGQGPVILFLHGFPELWY-----SWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 10 ~~~g~~~~~~~~~~~p~vl~~hG~~~~~~-----~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
..+|..+.......+++||.+-..++... ....+.+.+.++|+.|+.++..
T Consensus 26 d~~G~~vsL~~~kGkvvlv~fwAswC~~C~~e~p~L~~l~~~~~~~g~~vvgv~~~ 81 (199)
T PTZ00056 26 TLEGTTVPMSSLKNKVLMITNSASKCGLTKKHVDQMNRLHSVFNPLGLEILAFPTS 81 (199)
T ss_pred CCCCCEEeHHHhCCCEEEEEEECCCCCChHHHHHHHHHHHHHHhcCceEEEEecch
Confidence 34666666555444566666655443221 1233445555678999998754
No 383
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=27.69 E-value=1.9e+02 Score=19.14 Aligned_cols=36 Identities=17% Similarity=0.208 Sum_probs=24.5
Q ss_pred CCEEEEeCCCCC---chhhHHHHHHHHHhCCCEEEecCC
Q 044507 24 GPVILFLHGFPE---LWYSWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 24 ~p~vl~~hG~~~---~~~~~~~~~~~l~~~g~~v~~~d~ 59 (157)
+.+|++++-... .........+.|.+.|+.++-|+.
T Consensus 112 ~~pv~i~PaMn~~M~~~p~~~~nl~~L~~~G~~vi~P~~ 150 (177)
T TIGR02113 112 ETPKLIAPAMNTKMYQNPITQRNIKILKKIGYQEIQPKE 150 (177)
T ss_pred CCCEEEEeCCCHHHhCCHHHHHHHHHHHHCCCEEECCCc
Confidence 346777765432 334456667888899999988875
No 384
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=27.28 E-value=2.5e+02 Score=20.57 Aligned_cols=78 Identities=22% Similarity=0.276 Sum_probs=46.1
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhC-CCEEEecCC----CCC--CCCCCC---------------CCCCCCCHHHHHHH
Q 044507 25 PVILFLHGFPELWYSWRHQITALASL-GYRAVAPDL----RGF--GDTDAP---------------PDVTSYTCFHVIGD 82 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~----~g~--g~s~~~---------------~~~~~~~~~~~~~~ 82 (157)
+.++++-|=.++...-. +-.|+++ |..|+..|- +|. |...+. .....++..++..+
T Consensus 3 ~~~i~I~GPTAsGKT~l--ai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~~ 80 (308)
T COG0324 3 PKLIVIAGPTASGKTAL--AIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQRD 80 (308)
T ss_pred ccEEEEECCCCcCHHHH--HHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHHH
Confidence 55667767655543332 2244443 677888874 332 333221 22346888888888
Q ss_pred HHHHHHHhCCCCCcEEEEEEcH
Q 044507 83 LVGLIDTVAPNDEKVFVVGHDW 104 (157)
Q Consensus 83 l~~~~~~~~~~~~~i~l~G~S~ 104 (157)
+...++.+....+-.+++|-|+
T Consensus 81 a~~~i~~i~~rgk~pIlVGGTg 102 (308)
T COG0324 81 ALAAIDDILARGKLPILVGGTG 102 (308)
T ss_pred HHHHHHHHHhCCCCcEEEccHH
Confidence 8888888765445666676554
No 385
>KOG1481 consensus Cysteine synthase [Amino acid transport and metabolism]
Probab=27.21 E-value=1.6e+02 Score=21.55 Aligned_cols=41 Identities=10% Similarity=-0.078 Sum_probs=25.7
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCC
Q 044507 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDT 65 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s 65 (157)
...+--.|.+++......+.+.-.+....|++.|+||.|.-
T Consensus 215 DaFia~~GTGGTiaGVskyLkek~~~~v~~~laDPpGSGlY 255 (391)
T KOG1481|consen 215 DAFIAGTGTGGTIAGVSKYLKEKSDGRVAVFLADPPGSGLY 255 (391)
T ss_pred ceEEeccCCCcchHHHHHHHhhcCCCceEEEEeCCCCCchh
Confidence 45666667777755554443333333488999999998643
No 386
>PF00255 GSHPx: Glutathione peroxidase; InterPro: IPR000889 Glutathione peroxidase (GSHPx) (1.11.1.9 from EC) is an enzyme that catalyses the reduction of hydroxyperoxides by glutathione [, ]. Its main function is to protect against the damaging effect of endogenously formed hydroxyperoxides. In higher vertebrates, several forms of GSHPx are known, including a ubiquitous cytosolic form (GSHPx-1), a gastrointestinal cytosolic form (GSHPx-GI), a plasma secreted form (GSHPx-P), and an epididymal secretory form (GSHPx-EP). In addition to these characterised forms, the sequence of a protein of unknown function [] has been shown to be evolutionary related to those of GSHPx's. In filarial nematode parasites, the major soluble cuticular protein (gp29) is a secreted GSHPx, which may provide a mechanism of resistance to the immune reaction of the mammalian host by neutralising the products of the oxidative burst of leukocytes []. The Escherichia coli protein btuE, a periplasmic protein involved in vitamin B12 transport, is evolutionarily related to GSHPxs, although the significance of this relationship is unclear. The structure of bovine seleno-glutathione peroxidase has been determined []. The protein belongs to the alpha-beta class, with a 3 layer(aba) sandwich architecture. The catalyic site of GSHPx contains a conserved residue which is either a cysteine or, in many eukaryotic GSHPx, a selenocysteine []. ; GO: 0004602 glutathione peroxidase activity, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 3E0U_A 2VUP_A 2RM5_A 2RM6_A 3DWV_B 2P31_B 2R37_B 1GP1_B 2F8A_B 3KIJ_C ....
Probab=27.16 E-value=90 Score=18.81 Aligned_cols=57 Identities=11% Similarity=0.144 Sum_probs=32.6
Q ss_pred eEEEECCEEEEEeecCCCCEEEEeC--CCCCchhhH---HHHHHHHHhCCCEEEecCCCCCCC
Q 044507 7 RIVKVNGINMHIAEKGQGPVILFLH--GFPELWYSW---RHQITALASLGYRAVAPDLRGFGD 64 (157)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~p~vl~~h--G~~~~~~~~---~~~~~~l~~~g~~v~~~d~~g~g~ 64 (157)
....+||..+.......++ +|++. -.-+-..+| ..+.+...++|+.|+++=-.-+|.
T Consensus 5 ~~~~~~G~~v~l~~y~Gkv-~LIVNvAs~Cg~t~qy~~L~~L~~ky~~~gl~ILaFPcnqFg~ 66 (108)
T PF00255_consen 5 SAKDIDGKPVSLSKYKGKV-LLIVNVASKCGYTKQYKQLNELYEKYKDKGLEILAFPCNQFGN 66 (108)
T ss_dssp EEEBTTSSEEEGGGGTTSE-EEEEEEESSSTTHHHHHHHHHHHHHHGGGTEEEEEEEBSTTTT
T ss_pred eeeCCCCCEECHHHcCCCE-EEEEecccccCCccccHHHHHHHHHHhcCCeEEEeeehHHhcc
Confidence 3455688888877776664 44443 222222255 444566667799888764433443
No 387
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.85 E-value=74 Score=22.70 Aligned_cols=21 Identities=24% Similarity=0.170 Sum_probs=17.6
Q ss_pred cEEEEEEcHHHHHHHHHHhcC
Q 044507 96 KVFVVGHDWGAFMAWFLCLFR 116 (157)
Q Consensus 96 ~i~l~G~S~Gg~~a~~~~~~~ 116 (157)
-=.+.|-|.||.+++.++...
T Consensus 35 fD~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 35 IDLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred eeEEEEeCHHHHHHHHHHcCc
Confidence 347899999999999988754
No 388
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=26.76 E-value=1.5e+02 Score=21.30 Aligned_cols=35 Identities=26% Similarity=0.393 Sum_probs=24.4
Q ss_pred CCCEEEEeCCCCCch-----hhHHHHHHHHHhCCCEEEec
Q 044507 23 QGPVILFLHGFPELW-----YSWRHQITALASLGYRAVAP 57 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~-----~~~~~~~~~l~~~g~~v~~~ 57 (157)
++|.|++.||..... +.|..+++.|.++|+.++..
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~ 217 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLP 217 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEe
Confidence 356788888865433 35567788888778887654
No 389
>cd05009 SIS_GlmS_GlmD_2 SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=26.74 E-value=1.6e+02 Score=18.20 Aligned_cols=38 Identities=18% Similarity=0.219 Sum_probs=26.9
Q ss_pred CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCC
Q 044507 24 GPVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRG 61 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 61 (157)
+.++|++...+.+........+.+.+.|..++++....
T Consensus 62 ~~~vi~is~~g~t~~~~~~~~~~~~~~~~~vi~it~~~ 99 (153)
T cd05009 62 GTPVIFLAPEDRLEEKLESLIKEVKARGAKVIVITDDG 99 (153)
T ss_pred CCcEEEEecCChhHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 34666666655555556777888888899998887543
No 390
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=26.74 E-value=1.9e+02 Score=20.83 Aligned_cols=72 Identities=17% Similarity=0.014 Sum_probs=39.0
Q ss_pred CchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHH
Q 044507 35 ELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFM 108 (157)
Q Consensus 35 ~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~ 108 (157)
.+...+..+++..++.|+.-+++|---.+...... ...+......++.+++++.+...-.|.|..||-++..
T Consensus 29 ~~t~~~k~yIDfAa~~G~eYvlvD~GW~~~~~~~~--~d~~~~~~~~dl~elv~Ya~~KgVgi~lw~~~~~~~~ 100 (273)
T PF10566_consen 29 ATTETQKRYIDFAAEMGIEYVLVDAGWYGWEKDDD--FDFTKPIPDFDLPELVDYAKEKGVGIWLWYHSETGGN 100 (273)
T ss_dssp SSHHHHHHHHHHHHHTT-SEEEEBTTCCGS--TTT----TT-B-TT--HHHHHHHHHHTT-EEEEEEECCHTTB
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecccccccccccc--ccccccCCccCHHHHHHHHHHcCCCEEEEEeCCcchh
Confidence 35666788899999999888888753222110000 1111111124555666655445567999999998433
No 391
>PTZ00256 glutathione peroxidase; Provisional
Probab=26.65 E-value=1.2e+02 Score=19.87 Aligned_cols=51 Identities=10% Similarity=0.036 Sum_probs=27.3
Q ss_pred EECCEEEEEeecCCCCEEEEeC-CCCCc--h---hhHHHHHHHHHhCCCEEEecCCC
Q 044507 10 KVNGINMHIAEKGQGPVILFLH-GFPEL--W---YSWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 10 ~~~g~~~~~~~~~~~p~vl~~h-G~~~~--~---~~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
+.+|..+.......+++||++. ..++. . ..+..+.+.+.++|+.++.++..
T Consensus 27 d~~G~~vsLs~~~Gk~vvlv~n~atwCp~C~~e~p~l~~l~~~~~~~gv~vv~vs~~ 83 (183)
T PTZ00256 27 DIDGQLVQLSKFKGKKAIIVVNVACKCGLTSDHYTQLVELYKQYKSQGLEILAFPCN 83 (183)
T ss_pred cCCCCEEeHHHhCCCcEEEEEEECCCCCchHHHHHHHHHHHHHHhhCCcEEEEEecc
Confidence 3466666655544556555443 22211 1 12344455666678999888753
No 392
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=26.44 E-value=57 Score=21.56 Aligned_cols=48 Identities=13% Similarity=0.187 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcC-----ccceeEEEE
Q 044507 76 CFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFR-----PDRVKALVN 125 (157)
Q Consensus 76 ~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-----~~~~~~~i~ 125 (157)
..+.-.++.++++..+ ......+|-|||++.++.+.... |++.-++..
T Consensus 80 ~v~Yw~El~~i~dwa~--~~v~stl~iCWgaqaal~~~yGi~k~~~~~K~~Gvf~ 132 (175)
T cd03131 80 QVDYWEELTEILDWAK--THVTSTLFSCWAAMAALYYFYGIKKHQLPEKIFGVFP 132 (175)
T ss_pred ccchHHHHHHHHHHHH--HhCcchHHHHHHHHHHHHHHcCcccccCCCceEEEEE
Confidence 3345556778888773 34578888999999998887753 445555444
No 393
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=26.27 E-value=1.9e+02 Score=18.70 Aligned_cols=78 Identities=10% Similarity=0.099 Sum_probs=47.9
Q ss_pred CEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcH
Q 044507 25 PVILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDW 104 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~ 104 (157)
|.|.++-|...+.....+....|.+.|..+-. ..- . ...+ .+.+.++++.+....-++++.+-.+
T Consensus 1 p~V~Ii~gs~SD~~~~~~a~~~L~~~gi~~~~-~V~-----s-----aHR~----p~~l~~~~~~~~~~~~~viIa~AG~ 65 (150)
T PF00731_consen 1 PKVAIIMGSTSDLPIAEEAAKTLEEFGIPYEV-RVA-----S-----AHRT----PERLLEFVKEYEARGADVIIAVAGM 65 (150)
T ss_dssp -EEEEEESSGGGHHHHHHHHHHHHHTT-EEEE-EE------------TTTS----HHHHHHHHHHTTTTTESEEEEEEES
T ss_pred CeEEEEeCCHHHHHHHHHHHHHHHHcCCCEEE-EEE-----e-----ccCC----HHHHHHHHHHhccCCCEEEEEECCC
Confidence 56777888888877778888888887743321 100 0 1111 4456667776643334688888888
Q ss_pred HHHHHHHHHhcCc
Q 044507 105 GAFMAWFLCLFRP 117 (157)
Q Consensus 105 Gg~~a~~~~~~~~ 117 (157)
-+.+....+...+
T Consensus 66 ~a~Lpgvva~~t~ 78 (150)
T PF00731_consen 66 SAALPGVVASLTT 78 (150)
T ss_dssp S--HHHHHHHHSS
T ss_pred cccchhhheeccC
Confidence 8888888877654
No 394
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=26.27 E-value=1.7e+02 Score=22.05 Aligned_cols=33 Identities=24% Similarity=-0.019 Sum_probs=22.8
Q ss_pred CCCCchhhHHHHHHHHHhCCCEEEecCC-CCCCC
Q 044507 32 GFPELWYSWRHQITALASLGYRAVAPDL-RGFGD 64 (157)
Q Consensus 32 G~~~~~~~~~~~~~~l~~~g~~v~~~d~-~g~g~ 64 (157)
|+-|-...-..++..|+.+|++|+++|. -..+.
T Consensus 116 GGVGKTTta~nLA~~LA~~G~rVLlIDl~DpQ~n 149 (387)
T PHA02519 116 GGVYKTSSAVHTAQWLALQGHRVLLIEGNDPQGT 149 (387)
T ss_pred CCCcHHHHHHHHHHHHHhCCCcEEEEeCCCCCCC
Confidence 3334444456778889999999999995 55443
No 395
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=26.26 E-value=1.2e+02 Score=23.90 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=29.6
Q ss_pred CCCEEEEeCCCCC--chhhHHHHHHHHHhCCCEEEecCCC
Q 044507 23 QGPVILFLHGFPE--LWYSWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 23 ~~p~vl~~hG~~~--~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
..|+||++.|+-+ -...-..+...+..+|+.|+.+--|
T Consensus 297 ~~~vlivfeG~DaAGKgg~I~rl~~~ldPrg~~v~~~~~P 336 (493)
T TIGR03708 297 KRSLVLVFEGWDAAGKGGAIRRVTEALDARQYRVVPIAAP 336 (493)
T ss_pred CCCEEEEEEcccCCCCcHHHHHHHhhcCCCeeEEEeCCCc
Confidence 4589999999854 3445677888888899999888765
No 396
>cd01423 MGS_CPS_I_III Methylglyoxal synthase-like domain found in pyr1 and URA1-like carbamoyl phosphate synthetases (CPS), including ammonia-dependent CPS Type I, and glutamine-dependent CPS Type III. These are multidomain proteins, in which MGS is the C-terminal domain.
Probab=26.21 E-value=1.5e+02 Score=17.66 Aligned_cols=23 Identities=22% Similarity=0.148 Sum_probs=18.4
Q ss_pred CchhhHHHHHHHHHhCCCEEEec
Q 044507 35 ELWYSWRHQITALASLGYRAVAP 57 (157)
Q Consensus 35 ~~~~~~~~~~~~l~~~g~~v~~~ 57 (157)
.+.....++++.|.+.||.+++-
T Consensus 10 ~dk~~~~~~a~~l~~~G~~i~aT 32 (116)
T cd01423 10 YSKPELLPTAQKLSKLGYKLYAT 32 (116)
T ss_pred ccchhHHHHHHHHHHCCCEEEEc
Confidence 35667788899999999999764
No 397
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=26.18 E-value=60 Score=23.68 Aligned_cols=22 Identities=27% Similarity=0.345 Sum_probs=18.0
Q ss_pred CCCcEEEEEEcHHHHHHHHHHh
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCL 114 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~ 114 (157)
+..+.++.|||.|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 3678899999999988876655
No 398
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=26.13 E-value=75 Score=19.11 Aligned_cols=21 Identities=24% Similarity=0.271 Sum_probs=10.1
Q ss_pred HHHHHHHHhCCCEEEecCCCCCCC
Q 044507 41 RHQITALASLGYRAVAPDLRGFGD 64 (157)
Q Consensus 41 ~~~~~~l~~~g~~v~~~d~~g~g~ 64 (157)
..+.+...+.|...+ +||+|.
T Consensus 64 e~I~~ia~~~g~~~i---~pGyg~ 84 (110)
T PF00289_consen 64 EAIIDIARKEGADAI---HPGYGF 84 (110)
T ss_dssp HHHHHHHHHTTESEE---ESTSST
T ss_pred HHHhhHhhhhcCccc---ccccch
Confidence 445555555554443 345554
No 399
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=26.09 E-value=2.7e+02 Score=20.45 Aligned_cols=35 Identities=6% Similarity=-0.246 Sum_probs=22.7
Q ss_pred CCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeec
Q 044507 94 DEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSV 128 (157)
Q Consensus 94 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~ 128 (157)
+..|-++-||..|.+....++.--..+-..+...+
T Consensus 124 PGQIE~FtWSAsGsIIte~lass~ptvv~YvvDt~ 158 (366)
T KOG1532|consen 124 PGQIEAFTWSASGSIITETLASSFPTVVVYVVDTP 158 (366)
T ss_pred CCceEEEEecCCccchHhhHhhcCCeEEEEEecCC
Confidence 56888999999998887766643333444444333
No 400
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=25.83 E-value=1.6e+02 Score=20.46 Aligned_cols=35 Identities=14% Similarity=0.218 Sum_probs=22.3
Q ss_pred CEEEEeCCCCCchhh-HHHHHHHHHhCCC-EEEecCC
Q 044507 25 PVILFLHGFPELWYS-WRHQITALASLGY-RAVAPDL 59 (157)
Q Consensus 25 p~vl~~hG~~~~~~~-~~~~~~~l~~~g~-~v~~~d~ 59 (157)
.+|++.||....... |..+-..+.++|| +|+....
T Consensus 139 ~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~v 175 (265)
T COG4822 139 ILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAV 175 (265)
T ss_pred EEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEe
Confidence 478889998765444 4444455667777 5555544
No 401
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=25.61 E-value=90 Score=22.29 Aligned_cols=22 Identities=18% Similarity=0.045 Sum_probs=17.4
Q ss_pred cEEEEEEcHHHHHHHHHHhcCc
Q 044507 96 KVFVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 96 ~i~l~G~S~Gg~~a~~~~~~~~ 117 (157)
+|.|+|-+.+|..+...+++..
T Consensus 3 dV~IvGaG~aGl~~A~~L~~~G 24 (356)
T PF01494_consen 3 DVAIVGAGPAGLAAALALARAG 24 (356)
T ss_dssp EEEEE--SHHHHHHHHHHHHTT
T ss_pred eEEEECCCHHHHHHHHHHHhcc
Confidence 6899999999999988888775
No 402
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=25.41 E-value=2.3e+02 Score=19.38 Aligned_cols=74 Identities=11% Similarity=-0.018 Sum_probs=35.7
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEc
Q 044507 26 VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHD 103 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S 103 (157)
.+++++....+........+.+.+.|..++.+|....+.... ..-..+.......+.+.+-.. +.+++.+++..
T Consensus 58 giIi~~~~~~~~~~~~~~i~~~~~~~ipvV~i~~~~~~~~~~--~~V~~d~~~~~~~~~~~l~~~--g~~~i~~i~~~ 131 (273)
T cd06292 58 GVVFISSLHADTHADHSHYERLAERGLPVVLVNGRAPPPLKV--PHVSTDDALAMRLAVRHLVAL--GHRRIGFASGP 131 (273)
T ss_pred EEEEeCCCCCcccchhHHHHHHHhCCCCEEEEcCCCCCCCCC--CEEEECcHHHHHHHHHHHHHC--CCceEEEEeCC
Confidence 455554333332233444566777788888887532221111 112233334444444444443 55677777543
No 403
>COG1312 UxuA D-mannonate dehydratase [Carbohydrate transport and metabolism]
Probab=25.34 E-value=79 Score=23.44 Aligned_cols=27 Identities=22% Similarity=0.365 Sum_probs=22.0
Q ss_pred hhhHHHHHHHHHhCCCEEEecCC-CCCC
Q 044507 37 WYSWRHQITALASLGYRAVAPDL-RGFG 63 (157)
Q Consensus 37 ~~~~~~~~~~l~~~g~~v~~~d~-~g~g 63 (157)
..+|...++.|++.|..|+|+++ |..+
T Consensus 82 Ieny~~tirnLa~~GI~vvCYNfMpv~d 109 (362)
T COG1312 82 IENYKQTIRNLARAGIKVVCYNFMPVFD 109 (362)
T ss_pred HHHHHHHHHHHHhcCCcEEEeccccccC
Confidence 45678889999999999999986 3444
No 404
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=25.28 E-value=76 Score=18.75 Aligned_cols=31 Identities=23% Similarity=0.271 Sum_probs=21.9
Q ss_pred EEEeCCCCCchhhHHHHHHHHHhC-CCEEEecCC
Q 044507 27 ILFLHGFPELWYSWRHQITALASL-GYRAVAPDL 59 (157)
Q Consensus 27 vl~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 59 (157)
+|++.|.+++.... +++.|+++ |+.++..|-
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecc
Confidence 57788888775543 46666766 888887776
No 405
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=25.22 E-value=1.8e+02 Score=18.50 Aligned_cols=19 Identities=26% Similarity=0.342 Sum_probs=16.3
Q ss_pred CcEEEEEEcHHHHHHHHHH
Q 044507 95 EKVFVVGHDWGAFMAWFLC 113 (157)
Q Consensus 95 ~~i~l~G~S~Gg~~a~~~~ 113 (157)
.--.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 5678889999999998877
No 406
>cd03018 PRX_AhpE_like Peroxiredoxin (PRX) family, AhpE-like subfamily; composed of proteins similar to Mycobacterium tuberculosis AhpE. AhpE is described as a 1-cys PRX because of the absence of a resolving cysteine. The structure and sequence of AhpE, however, show greater similarity to 2-cys PRXs than 1-cys PRXs. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. The first step of catalysis is the nucleophilic attack by the peroxidatic cysteine on the peroxide leading to the formation of a cysteine sulfenic acid intermediate. The absence of a resolving cysteine suggests that functional AhpE is regenerated by an external reductant. The solution behavior and crystal structure of AhpE show that it forms dimers and octamers.
Probab=25.11 E-value=1.7e+02 Score=17.94 Aligned_cols=50 Identities=16% Similarity=0.197 Sum_probs=28.1
Q ss_pred EECCEEEEEeecCC-CCEEEEeC-CCCCch--hh---HHHHHHHHHhCCCEEEecCC
Q 044507 10 KVNGINMHIAEKGQ-GPVILFLH-GFPELW--YS---WRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 10 ~~~g~~~~~~~~~~-~p~vl~~h-G~~~~~--~~---~~~~~~~l~~~g~~v~~~d~ 59 (157)
+.+|..+....-.. +++||++. +..+.. .. +..+.+.+.+.|..++++..
T Consensus 14 ~~~g~~v~l~~~~g~k~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vi~vs~ 70 (149)
T cd03018 14 DQNGQEVRLSEFRGRKPVVLVFFPLAFTPVCTKELCALRDSLELFEAAGAEVLGISV 70 (149)
T ss_pred CCCCCEEeHHHHcCCCeEEEEEeCCCCCccHHHHHHHHHHHHHHHHhCCCEEEEecC
Confidence 34666676655433 66666553 443322 12 23445566667888888873
No 407
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=25.00 E-value=98 Score=21.54 Aligned_cols=21 Identities=19% Similarity=0.053 Sum_probs=18.0
Q ss_pred EEEEEEcHHHHHHHHHHhcCc
Q 044507 97 VFVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 97 i~l~G~S~Gg~~a~~~~~~~~ 117 (157)
-.+.|-|.|+.++..++...+
T Consensus 33 ~~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 33 RRIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 389999999999998888654
No 408
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=25.00 E-value=2.2e+02 Score=18.99 Aligned_cols=64 Identities=14% Similarity=0.031 Sum_probs=32.5
Q ss_pred CEEEEeCCCCCc---hhhHHHHHHHHHhCCC--EEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 044507 25 PVILFLHGFPEL---WYSWRHQITALASLGY--RAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTV 90 (157)
Q Consensus 25 p~vl~~hG~~~~---~~~~~~~~~~l~~~g~--~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~ 90 (157)
.++++++|.... ......+.+.+.+.|- .+..+.--+||...... ..++.....+....+++.+
T Consensus 146 ~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~--~~~~~~aa~~a~~~~~~ff 214 (218)
T PF01738_consen 146 APVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSR--PPYDPAAAEDAWQRTLAFF 214 (218)
T ss_dssp S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTS--TT--HHHHHHHHHHHHHHH
T ss_pred CCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCC--cccCHHHHHHHHHHHHHHH
Confidence 467777776543 2334566777766654 44444444577665544 2445555555555555555
No 409
>PRK14538 putative bifunctional signaling protein/50S ribosomal protein L9; Provisional
Probab=24.87 E-value=2.9e+02 Score=23.51 Aligned_cols=62 Identities=19% Similarity=0.345 Sum_probs=36.0
Q ss_pred hC-CCEEEecCC----CCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEE------cHHHHHHHHHHh
Q 044507 49 SL-GYRAVAPDL----RGFGD-TDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGH------DWGAFMAWFLCL 114 (157)
Q Consensus 49 ~~-g~~v~~~d~----~g~g~-s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~------S~Gg~~a~~~~~ 114 (157)
.+ |=+|+.-+. +-+|. |...........+..+..+.+.++. .+++.++|| +.|+++++....
T Consensus 320 gRGGDQvvvk~~~~~~~fyGGks~~~eKrtrVraRvia~~L~elI~~----~d~ViI~gH~nPD~DAlGSalaL~~~l 393 (838)
T PRK14538 320 KRGGDQAVVNIENEKIKYFGAKIASLSKQSKVNARVNAQNLVDILKK----NPHCFIMGHNHTDLDSLGSMIAFYKIA 393 (838)
T ss_pred ccCCCEEEEEcCCCCceEeCCCCCcccchhhHHHHHHHHHHHHHHhc----CCeEEEEecCCCCchHHHHHHHHHHHH
Confidence 44 445555442 23444 3333322344444455566666653 479999998 689999877654
No 410
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=24.84 E-value=1.1e+02 Score=22.50 Aligned_cols=34 Identities=12% Similarity=0.192 Sum_probs=25.4
Q ss_pred EEeCCCC-CchhhHHHHHHHHHhCCCEEEecCCCC
Q 044507 28 LFLHGFP-ELWYSWRHQITALASLGYRAVAPDLRG 61 (157)
Q Consensus 28 l~~hG~~-~~~~~~~~~~~~l~~~g~~v~~~d~~g 61 (157)
|++.+.. ++......+++.+.+.+.+.+++|.-.
T Consensus 2 iYlt~~~a~~~~~~~~~~~~i~~t~lNavVIDvKd 36 (316)
T PF13200_consen 2 IYLTAYSAGSPERLDKLLDLIKRTELNAVVIDVKD 36 (316)
T ss_pred EEechhhcCCHHHHHHHHHHHHhcCCceEEEEEec
Confidence 4566654 344667888999999999999999853
No 411
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=24.69 E-value=1.4e+02 Score=21.82 Aligned_cols=32 Identities=19% Similarity=0.065 Sum_probs=22.6
Q ss_pred EEEeCC---CCCchhhHHHHHHHHHhCCCEEEecC
Q 044507 27 ILFLHG---FPELWYSWRHQITALASLGYRAVAPD 58 (157)
Q Consensus 27 vl~~hG---~~~~~~~~~~~~~~l~~~g~~v~~~d 58 (157)
|+++|- .+|.......+++.|.++|+.|..+-
T Consensus 3 Il~~~~~~~~gG~e~~~~~la~~L~~~G~~V~v~~ 37 (392)
T cd03805 3 VAFIHPDLGIGGAERLVVDAALALQSRGHEVTIYT 37 (392)
T ss_pred EEEECCCCCCchHHHHHHHHHHHHHhCCCeEEEEc
Confidence 455553 35666667888999999998886553
No 412
>KOG0736 consensus Peroxisome assembly factor 2 containing the AAA+-type ATPase domain [Posttranslational modification, protein turnover, chaperones]
Probab=24.66 E-value=4.5e+02 Score=22.51 Aligned_cols=58 Identities=22% Similarity=0.278 Sum_probs=40.8
Q ss_pred CCCHHHHHHHHHHHHHHhCC-CCCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeecccC
Q 044507 73 SYTCFHVIGDLVGLIDTVAP-NDEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSVVFN 131 (157)
Q Consensus 73 ~~~~~~~~~~l~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~~~~ 131 (157)
.--++..+..+.+-++.+.. ..+.++++|...-- -.+.-+..+|.++++++-+++.-+
T Consensus 787 GGVMDRVVSQLLAELDgls~~~s~~VFViGATNRP-DLLDpALLRPGRFDKLvyvG~~~d 845 (953)
T KOG0736|consen 787 GGVMDRVVSQLLAELDGLSDSSSQDVFVIGATNRP-DLLDPALLRPGRFDKLVYVGPNED 845 (953)
T ss_pred cccHHHHHHHHHHHhhcccCCCCCceEEEecCCCc-cccChhhcCCCccceeEEecCCcc
Confidence 34467778888888888875 56789999876532 123335567889999999987654
No 413
>PRK00889 adenylylsulfate kinase; Provisional
Probab=24.56 E-value=2e+02 Score=18.45 Aligned_cols=35 Identities=20% Similarity=0.196 Sum_probs=23.9
Q ss_pred CEEEEeCCCCCchhhH--HHHHHHHHhCCCEEEecCC
Q 044507 25 PVILFLHGFPELWYSW--RHQITALASLGYRAVAPDL 59 (157)
Q Consensus 25 p~vl~~hG~~~~~~~~--~~~~~~l~~~g~~v~~~d~ 59 (157)
+.++.+.|..|+...- ..++..+...|..+..+|.
T Consensus 4 g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 4 GVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 4578888988775543 5566677667777776754
No 414
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=24.51 E-value=1.7e+02 Score=17.48 Aligned_cols=35 Identities=3% Similarity=0.009 Sum_probs=24.6
Q ss_pred CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCC
Q 044507 24 GPVILFLHGFPELWYSWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (157)
+..+|++. ..+.........+.+.++|..++++.-
T Consensus 54 ~d~vi~is-~sg~~~~~~~~~~~ak~~g~~vi~iT~ 88 (131)
T PF01380_consen 54 DDLVIIIS-YSGETRELIELLRFAKERGAPVILITS 88 (131)
T ss_dssp TEEEEEEE-SSSTTHHHHHHHHHHHHTTSEEEEEES
T ss_pred cceeEeee-ccccchhhhhhhHHHHhcCCeEEEEeC
Confidence 34566665 555556666777788899999888864
No 415
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=24.45 E-value=2.2e+02 Score=20.59 Aligned_cols=80 Identities=13% Similarity=0.075 Sum_probs=42.3
Q ss_pred EEEEeCCCCCchhhH-HHHHHHHHhCCC-------EEEecCCCCCCCCCCCCCCCCCCHHHH--------HHHHHHHHHH
Q 044507 26 VILFLHGFPELWYSW-RHQITALASLGY-------RAVAPDLRGFGDTDAPPDVTSYTCFHV--------IGDLVGLIDT 89 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~-~~~~~~l~~~g~-------~v~~~d~~g~g~s~~~~~~~~~~~~~~--------~~~l~~~~~~ 89 (157)
.-|++.|.|.....- +.+.+.+.+.|. +++.+|..|-=..+... .......+ ..++.+.++.
T Consensus 26 ~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~--l~~~~~~~a~~~~~~~~~~L~e~i~~ 103 (279)
T cd05312 26 QRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKD--LTPFKKPFARKDEEKEGKSLLEVVKA 103 (279)
T ss_pred cEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCc--chHHHHHHHhhcCcccCCCHHHHHHh
Confidence 345555777654444 334455555576 89999998742222110 00000011 1245555554
Q ss_pred hCCCCCcEEEEEEcH-HHHHHHH
Q 044507 90 VAPNDEKVFVVGHDW-GAFMAWF 111 (157)
Q Consensus 90 ~~~~~~~i~l~G~S~-Gg~~a~~ 111 (157)
+ ++-+++|-|- ||.+.-.
T Consensus 104 v----~ptvlIG~S~~~g~ft~e 122 (279)
T cd05312 104 V----KPTVLIGLSGVGGAFTEE 122 (279)
T ss_pred c----CCCEEEEeCCCCCCCCHH
Confidence 4 6789999994 6655433
No 416
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=24.42 E-value=2.8e+02 Score=21.25 Aligned_cols=41 Identities=12% Similarity=0.142 Sum_probs=25.7
Q ss_pred CEEEEeCCCC---CchhhHHHHHHHHHhC----CCEEEecCCCCCCCC
Q 044507 25 PVILFLHGFP---ELWYSWRHQITALASL----GYRAVAPDLRGFGDT 65 (157)
Q Consensus 25 p~vl~~hG~~---~~~~~~~~~~~~l~~~----g~~v~~~d~~g~g~s 65 (157)
|-+|++.... -..++...+++.+.++ +..++.++-+|+..+
T Consensus 85 P~~I~V~ttc~~~iiGdDi~~v~~~~~~~~~~~~~~vi~v~t~gF~g~ 132 (429)
T cd03466 85 PEVIGIATTCLSETIGEDVPRIIREFREEVDDSEPKIIPASTPGYGGT 132 (429)
T ss_pred CCEEEEeCCchHHHhhcCHHHHHHHHhhcccCCCCcEEEEECCCCccc
Confidence 5455544432 2345667777777763 678898888887543
No 417
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.33 E-value=90 Score=23.12 Aligned_cols=19 Identities=32% Similarity=0.331 Sum_probs=16.2
Q ss_pred EEEEEEcHHHHHHHHHHhc
Q 044507 97 VFVVGHDWGAFMAWFLCLF 115 (157)
Q Consensus 97 i~l~G~S~Gg~~a~~~~~~ 115 (157)
=.+.|-|.||.+|+.++..
T Consensus 43 DlIaGTStGgIIAa~la~g 61 (344)
T cd07217 43 DFVGGTSTGSIIAACIALG 61 (344)
T ss_pred cEEEEecHHHHHHHHHHcC
Confidence 4789999999999988764
No 418
>PRK03846 adenylylsulfate kinase; Provisional
Probab=24.32 E-value=2.1e+02 Score=18.94 Aligned_cols=37 Identities=24% Similarity=0.165 Sum_probs=24.2
Q ss_pred CCCEEEEeCCCCCchhh--HHHHHHHHHhCCCEEEecCC
Q 044507 23 QGPVILFLHGFPELWYS--WRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 23 ~~p~vl~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~ 59 (157)
..|.++.+.|..|.... ...+...+...|..++.+|-
T Consensus 22 ~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld~ 60 (198)
T PRK03846 22 HKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLDG 60 (198)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEcC
Confidence 45788888898776554 34455566666776666653
No 419
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=24.31 E-value=73 Score=20.74 Aligned_cols=21 Identities=14% Similarity=0.055 Sum_probs=17.8
Q ss_pred cEEEEEEcHHHHHHHHHHhcC
Q 044507 96 KVFVVGHDWGAFMAWFLCLFR 116 (157)
Q Consensus 96 ~i~l~G~S~Gg~~a~~~~~~~ 116 (157)
++.++|-+.+|..+...+.+.
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~~ 21 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELARP 21 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHHT
T ss_pred CEEEEecHHHHHHHHHHHhcC
Confidence 578999999999998888843
No 420
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=24.02 E-value=1.2e+02 Score=21.94 Aligned_cols=33 Identities=12% Similarity=0.017 Sum_probs=24.0
Q ss_pred EEEeCCCCCchhhHHHHHHHHHhCCCEEEecCC
Q 044507 27 ILFLHGFPELWYSWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 27 vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (157)
++...|.++.......+++.|.+.|+.|..+-.
T Consensus 5 ~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~ 37 (357)
T PRK00726 5 LLAGGGTGGHVFPALALAEELKKRGWEVLYLGT 37 (357)
T ss_pred EEEcCcchHhhhHHHHHHHHHHhCCCEEEEEEC
Confidence 444456777766667889999999998877644
No 421
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=23.94 E-value=1.5e+02 Score=18.68 Aligned_cols=32 Identities=13% Similarity=0.102 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHH
Q 044507 78 HVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWF 111 (157)
Q Consensus 78 ~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~ 111 (157)
.....+.-.+..+ +.+.|+++||+-=|++...
T Consensus 40 ~~~~sle~av~~l--~v~~IiV~gHt~CGa~~~~ 71 (153)
T PF00484_consen 40 SALASLEYAVYHL--GVKEIIVCGHTDCGAIKAA 71 (153)
T ss_dssp HHHHHHHHHHHTS--T-SEEEEEEETT-HHHHHH
T ss_pred chhhheeeeeecC--CCCEEEEEcCCCchHHHHH
Confidence 3455566666666 7899999999986666533
No 422
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=23.82 E-value=1.8e+02 Score=20.41 Aligned_cols=22 Identities=23% Similarity=-0.022 Sum_probs=18.0
Q ss_pred cEEEEEEcHHHHHHHHHHhcCc
Q 044507 96 KVFVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 96 ~i~l~G~S~Gg~~a~~~~~~~~ 117 (157)
.-.+.|-|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 4568899999999998887654
No 423
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=23.79 E-value=1.9e+02 Score=17.83 Aligned_cols=14 Identities=29% Similarity=0.501 Sum_probs=10.2
Q ss_pred HHHHHhCCCEEEec
Q 044507 44 ITALASLGYRAVAP 57 (157)
Q Consensus 44 ~~~l~~~g~~v~~~ 57 (157)
.+.|.+.|+.|+-+
T Consensus 100 ~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 100 NSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHCcCEEEEE
Confidence 45677889988754
No 424
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=23.59 E-value=2.3e+02 Score=18.76 Aligned_cols=33 Identities=21% Similarity=0.059 Sum_probs=18.1
Q ss_pred CCCCCchhh--HHHHHHHHHh----CCCEEEecCCCCCC
Q 044507 31 HGFPELWYS--WRHQITALAS----LGYRAVAPDLRGFG 63 (157)
Q Consensus 31 hG~~~~~~~--~~~~~~~l~~----~g~~v~~~d~~g~g 63 (157)
-|..++... ...++..+.. ....++++|..+..
T Consensus 44 ~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~ 82 (205)
T PF01580_consen 44 AGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSD 82 (205)
T ss_dssp E--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSC
T ss_pred EcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccc
Confidence 354444333 2445555555 57899999998653
No 425
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=23.52 E-value=71 Score=19.84 Aligned_cols=29 Identities=14% Similarity=-0.094 Sum_probs=21.2
Q ss_pred CCCCchhhHHHHHHHHHhCCCEEEecCCC
Q 044507 32 GFPELWYSWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 32 G~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
+.||.......+++.|.++|+.|..+...
T Consensus 10 ~~GG~e~~~~~l~~~l~~~G~~v~v~~~~ 38 (177)
T PF13439_consen 10 NIGGAERVVLNLARALAKRGHEVTVVSPG 38 (177)
T ss_dssp SSSHHHHHHHHHHHHHHHTT-EEEEEESS
T ss_pred CCChHHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 45666667788899999999988777443
No 426
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=23.47 E-value=1.2e+02 Score=20.18 Aligned_cols=27 Identities=19% Similarity=0.287 Sum_probs=13.5
Q ss_pred CHHHHHHHHHHHHHHhCC--CCCcEEEEE
Q 044507 75 TCFHVIGDLVGLIDTVAP--NDEKVFVVG 101 (157)
Q Consensus 75 ~~~~~~~~l~~~~~~~~~--~~~~i~l~G 101 (157)
+.++....+..+++.+.. ...+|.++-
T Consensus 72 ~~~~~~~~~~~fv~~iR~~hP~tPIllv~ 100 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREAHPDTPILLVS 100 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT-SSS-EEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 334455555555555543 235666664
No 427
>cd01126 TraG_VirD4 The TraG/TraD/VirD4 family are bacterial conjugation proteins involved in type IV secretion. These proteins aid the transfer of DNA from the plasmid into the host bacterial chromosome. They contain an ATP binding domain. VirD4 is involved in DNA transfer to plant cells and is required for virulence.
Probab=23.11 E-value=3.1e+02 Score=20.47 Aligned_cols=27 Identities=11% Similarity=0.025 Sum_probs=19.2
Q ss_pred hhHHHHHHHHHhCCCEEEecCCCCCCC
Q 044507 38 YSWRHQITALASLGYRAVAPDLRGFGD 64 (157)
Q Consensus 38 ~~~~~~~~~l~~~g~~v~~~d~~g~g~ 64 (157)
+.|........+.|+.|+++|+.+...
T Consensus 36 e~~~~t~~~r~~~G~~V~v~nP~~~~~ 62 (384)
T cd01126 36 ENFELTSEHRRALGRKVFVFDPTNPRG 62 (384)
T ss_pred hHHHHHHHHHHHcCCeEEEEcCCCCCC
Confidence 345556666677899999999865433
No 428
>PF09757 Arb2: Arb2 domain; InterPro: IPR019154 The fission yeast Argonaute siRNA chaperone (ARC) complex contains the Argonaute protein Ago1 and two previously uncharacterised proteins, Arb1 and Arb2, both of which are required for histone H3 Lys9 (H3-K9) methylation, heterochromatin assembly and siRNA generation []. This entry represents a region found in both Arb2 and the Hda1 protein. ; PDB: 2VQV_A 2VQO_A 2VQJ_A 2VQQ_B 2VQM_A 2VQW_G.
Probab=22.74 E-value=28 Score=22.88 Aligned_cols=38 Identities=13% Similarity=0.161 Sum_probs=0.0
Q ss_pred CCCEEEEeCCCCCc-------------hhhHHHHHHHHHhCCCEEEecCCC
Q 044507 23 QGPVILFLHGFPEL-------------WYSWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 23 ~~p~vl~~hG~~~~-------------~~~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
..+.||++||.+.- ...+..+++...++||.|+.++..
T Consensus 98 ~~~llViih~~g~~wa~~~~~~~~l~~gs~~~~~i~~A~~~~~gVI~~N~~ 148 (178)
T PF09757_consen 98 AKKLLVIIHGSGVIWARRLIINGGLDSGSQIPQYIKWALKEGYGVIDLNPN 148 (178)
T ss_dssp ---------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34688999997641 011111556666778888888764
No 429
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=22.66 E-value=1.9e+02 Score=17.45 Aligned_cols=30 Identities=17% Similarity=0.265 Sum_probs=19.9
Q ss_pred CCCCchhhH-HHHHHHHHhCCCEEEecCCCC
Q 044507 32 GFPELWYSW-RHQITALASLGYRAVAPDLRG 61 (157)
Q Consensus 32 G~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g 61 (157)
|...+...+ ..+.+.|.++|+.++.++..+
T Consensus 7 GaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~ 37 (116)
T PF13380_consen 7 GASDNPGKFGYRVLRNLKAAGYEVYPVNPKG 37 (116)
T ss_dssp T--SSTTSHHHHHHHHHHHTT-EEEEESTTC
T ss_pred cccCCCCChHHHHHHHHHhCCCEEEEECCCc
Confidence 555554444 446778888999999999876
No 430
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=22.36 E-value=2.2e+02 Score=21.63 Aligned_cols=38 Identities=29% Similarity=0.141 Sum_probs=24.8
Q ss_pred EEEEeCCCC--CchhhHHHHHHHHHhCCCEEEecCCCCCC
Q 044507 26 VILFLHGFP--ELWYSWRHQITALASLGYRAVAPDLRGFG 63 (157)
Q Consensus 26 ~vl~~hG~~--~~~~~~~~~~~~l~~~g~~v~~~d~~g~g 63 (157)
+|.+...-| |-...-..++..|+..|++|+++|.--.+
T Consensus 123 vIav~n~KGGvGKTTta~nLA~~LA~~G~rVLlIDlDpQ~ 162 (405)
T PRK13869 123 VIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAVDLDPQA 162 (405)
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHhcCCceEEEcCCCCC
Confidence 444444333 43444566788899999999999875443
No 431
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=22.29 E-value=2.2e+02 Score=20.04 Aligned_cols=22 Identities=18% Similarity=0.094 Sum_probs=18.2
Q ss_pred cEEEEEEcHHHHHHHHHHhcCc
Q 044507 96 KVFVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 96 ~i~l~G~S~Gg~~a~~~~~~~~ 117 (157)
.-.+.|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 4579999999999998887654
No 432
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=22.10 E-value=3.1e+02 Score=19.80 Aligned_cols=103 Identities=14% Similarity=0.010 Sum_probs=56.4
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHH
Q 044507 26 VILFLHGFPELWYSWRHQITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWG 105 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~G 105 (157)
.||+-.|+... .-..+.+...+.|.+++.|+-.|.-...... ..+. . ..+ ....++.++..|-+
T Consensus 91 avIis~Gf~e~--~~~~l~~~a~~~girilGPNc~Giin~~~~~---~~~~---~-------~~~-~~~G~ValiSQSG~ 154 (286)
T TIGR01019 91 IVCITEGIPVH--DMLKVKRYMEESGTRLIGPNCPGIITPGECK---IGIM---P-------GHI-HKPGNVGIVSRSGT 154 (286)
T ss_pred EEEECCCCCHH--HHHHHHHHHHHcCCEEECCCCceEEcccccc---eeec---c-------ccC-CCCCcEEEEeccHH
Confidence 45555566432 2245666677789999999987754322110 0000 0 001 13567999977765
Q ss_pred HH-HHHHHHhcCccceeEEEEeecccCCCCCchHHHHHHH
Q 044507 106 AF-MAWFLCLFRPDRVKALVNLSVVFNPFGSINNVIEALR 144 (157)
Q Consensus 106 g~-~a~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 144 (157)
=. ..+.++....-.+..++.++..........+....+.
T Consensus 155 l~~~~~~~a~~~giG~S~~Vs~Gn~a~~dv~~~D~l~~l~ 194 (286)
T TIGR01019 155 LTYEAVHQLTKAGFGQSTCVGIGGDPVNGTSFIDVLEAFE 194 (286)
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCCCcCCCCCHHHHHHHHh
Confidence 32 2334455555567788887765443344445555443
No 433
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=21.98 E-value=84 Score=22.62 Aligned_cols=18 Identities=33% Similarity=0.625 Sum_probs=15.5
Q ss_pred EEEEEEcHHHHHHHHHHh
Q 044507 97 VFVVGHDWGAFMAWFLCL 114 (157)
Q Consensus 97 i~l~G~S~Gg~~a~~~~~ 114 (157)
=.+.|-|.||.+|+.++.
T Consensus 43 Dli~GTStGgiiA~~la~ 60 (308)
T cd07211 43 DYICGVSTGAILAFLLGL 60 (308)
T ss_pred CEEEecChhHHHHHHHhc
Confidence 458999999999998875
No 434
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=21.75 E-value=2.1e+02 Score=18.28 Aligned_cols=36 Identities=19% Similarity=0.158 Sum_probs=22.9
Q ss_pred EEeCCCCCchhhH--HHHHHHHHhCCCEEEecCCCCCC
Q 044507 28 LFLHGFPELWYSW--RHQITALASLGYRAVAPDLRGFG 63 (157)
Q Consensus 28 l~~hG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~g~g 63 (157)
+.+-|..++.... ..++..+.++|++|..+.+-+++
T Consensus 2 i~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHD 39 (155)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 4455665554333 66777888889988887655443
No 435
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=21.58 E-value=3.9e+02 Score=20.67 Aligned_cols=20 Identities=20% Similarity=0.140 Sum_probs=13.4
Q ss_pred HHHHhCCCEEEecCCCCCCC
Q 044507 45 TALASLGYRAVAPDLRGFGD 64 (157)
Q Consensus 45 ~~l~~~g~~v~~~d~~g~g~ 64 (157)
+.+...+|.++.+|-+|...
T Consensus 176 ~~~~~~~~DvVIIDTaGr~~ 195 (428)
T TIGR00959 176 EYAKENGFDVVIVDTAGRLQ 195 (428)
T ss_pred HHHHhcCCCEEEEeCCCccc
Confidence 34445678888888876543
No 436
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=21.52 E-value=2.5e+02 Score=20.70 Aligned_cols=39 Identities=28% Similarity=0.313 Sum_probs=27.2
Q ss_pred CCEEEEe-CCCC-CchhhHHHHHHHHHhCCCEEEecCCCCC
Q 044507 24 GPVILFL-HGFP-ELWYSWRHQITALASLGYRAVAPDLRGF 62 (157)
Q Consensus 24 ~p~vl~~-hG~~-~~~~~~~~~~~~l~~~g~~v~~~d~~g~ 62 (157)
.+.++++ |... .....-++++..|+++|++|+.++.+|.
T Consensus 4 ~~~~~~~~~~~w~~~~~~~qhl~~~~a~~~~~vl~v~~~~~ 44 (373)
T cd04950 4 RPDILVFSADDWDFLWQRPQHLAARLAERGNRVLYVEPPGL 44 (373)
T ss_pred CCeEEEecccCcCCCCCCHHHHHHHHHhCCCeEEEEeCCCc
Confidence 3455555 5433 3444557888999988899999998875
No 437
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=21.51 E-value=2.7e+02 Score=18.91 Aligned_cols=18 Identities=22% Similarity=0.060 Sum_probs=15.0
Q ss_pred CcEEEEEEcHHHHHHHHH
Q 044507 95 EKVFVVGHDWGAFMAWFL 112 (157)
Q Consensus 95 ~~i~l~G~S~Gg~~a~~~ 112 (157)
....++|.|.|+.+....
T Consensus 116 ~G~v~~G~SAGA~i~~~~ 133 (217)
T cd03145 116 GGVVIGGTSAGAAVMSDT 133 (217)
T ss_pred cCCEEEEccHHHHhhhhc
Confidence 567899999999987655
No 438
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=21.50 E-value=2.8e+02 Score=19.49 Aligned_cols=37 Identities=16% Similarity=0.060 Sum_probs=25.4
Q ss_pred EEEEeCCCCCchh--hHHHHHHHHHhCCCEEEecCCCCCC
Q 044507 26 VILFLHGFPELWY--SWRHQITALASLGYRAVAPDLRGFG 63 (157)
Q Consensus 26 ~vl~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~g 63 (157)
+|.+. |-||... .-..++..|+++|++|+.+|.--.|
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~ 41 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKA 41 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCcc
Confidence 34555 6665433 3466788899999999999875443
No 439
>cd02969 PRX_like1 Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.
Probab=21.38 E-value=2e+02 Score=18.36 Aligned_cols=49 Identities=10% Similarity=0.103 Sum_probs=28.4
Q ss_pred ECCEEEEEeec-CCCCEEEEeCCCCCchh-----hHHHHHHHHHhCCCEEEecCC
Q 044507 11 VNGINMHIAEK-GQGPVILFLHGFPELWY-----SWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 11 ~~g~~~~~~~~-~~~p~vl~~hG~~~~~~-----~~~~~~~~l~~~g~~v~~~d~ 59 (157)
.+|..+..... +++++||++....+... ....+.+.+.+.+..++.+..
T Consensus 12 ~~g~~v~l~~~~~~k~~ll~f~~t~Cp~c~~~~~~l~~l~~~~~~~~v~~v~is~ 66 (171)
T cd02969 12 TDGKTYSLADFADGKALVVMFICNHCPYVKAIEDRLNRLAKEYGAKGVAVVAINS 66 (171)
T ss_pred CCCCEEeHHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHHhhCCeEEEEEec
Confidence 35556665554 55678888876654322 223344455555678877764
No 440
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=21.35 E-value=4.1e+02 Score=20.90 Aligned_cols=62 Identities=15% Similarity=0.169 Sum_probs=36.1
Q ss_pred CCEEEEeCCCCCc---hhhHHHHHHHHHhCCCEEEecCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 044507 24 GPVILFLHGFPEL---WYSWRHQITALASLGYRAVAPDLRG---FGDTDAPPDVTSYTCFHVIGDLVGLID 88 (157)
Q Consensus 24 ~p~vl~~hG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~g---~g~s~~~~~~~~~~~~~~~~~l~~~~~ 88 (157)
+.++++++-.... ..........|.+.|+.++-|+.-- +|+... ......++....+..++.
T Consensus 180 ~~PvliaPaMN~~M~~npat~~Nl~~L~~~G~~vi~P~~g~lA~~g~~G~---Grm~e~~~I~~~v~~~~~ 247 (475)
T PRK13982 180 NRPILLAPAMNPLMWNNPATRRNVAQLKRDGVHMIGPNAGEMAERGEAGV---GRMAEPLEIAAAAEALLR 247 (475)
T ss_pred CCCEEEEEcCCHHHhcCHHHHHHHHHHHHCCCEEECCCCCccccCCCcCC---CCCCCHHHHHHHHHHHHh
Confidence 3467777665443 3334556778888999998776410 222211 134556667777766664
No 441
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=21.34 E-value=84 Score=23.04 Aligned_cols=18 Identities=17% Similarity=0.239 Sum_probs=14.2
Q ss_pred EEEEEEcHHHHHHHHHHh
Q 044507 97 VFVVGHDWGAFMAWFLCL 114 (157)
Q Consensus 97 i~l~G~S~Gg~~a~~~~~ 114 (157)
-.++|||+|=..++..+.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 368999999988876654
No 442
>PF05973 Gp49: Phage derived protein Gp49-like (DUF891); InterPro: IPR009241 This entry consists of several hypothetical viral and bacterial proteins some are annotated as addiction module killer proteins.
Probab=21.31 E-value=1.7e+02 Score=16.53 Aligned_cols=21 Identities=29% Similarity=0.428 Sum_probs=15.0
Q ss_pred CEEEEEeecCCCCEEEEeCCCC
Q 044507 13 GINMHIAEKGQGPVILFLHGFP 34 (157)
Q Consensus 13 g~~~~~~~~~~~p~vl~~hG~~ 34 (157)
..++.|....+. .+|++||+.
T Consensus 52 ~~Ri~y~~~~~~-~ivll~~f~ 72 (91)
T PF05973_consen 52 IYRILYFFDGGD-IIVLLHGFI 72 (91)
T ss_pred cceEEEEEcCcc-EEEEEEEEE
Confidence 556777666544 899999885
No 443
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=21.29 E-value=2.2e+02 Score=18.60 Aligned_cols=38 Identities=18% Similarity=0.187 Sum_probs=28.6
Q ss_pred EEEEeCCCCCch--hhHHHHHHHHHhCCCEEEecCCCCCC
Q 044507 26 VILFLHGFPELW--YSWRHQITALASLGYRAVAPDLRGFG 63 (157)
Q Consensus 26 ~vl~~hG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~g~g 63 (157)
.|+=+-|+-.+. .-...+++.|.++|++|-++-+.+|+
T Consensus 3 ~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 3 KILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred cEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 456666775443 33478889999999999999888776
No 444
>PF06414 Zeta_toxin: Zeta toxin; InterPro: IPR010488 This entry represents a domain originally identified in bacterial zeta toxin proteins, where it comprises the whole protein []. It has subsequently been found in a number of other proteins, such as polynucleotide kinase and 2',3'-cyclic-nucleotide 3'-phosphodiesterase. It appears to function as a kinase domain [, ].; GO: 0005524 ATP binding, 0016301 kinase activity; PDB: 2P5T_H 1GVN_B 3Q8X_D.
Probab=21.27 E-value=1.6e+02 Score=19.49 Aligned_cols=32 Identities=22% Similarity=0.187 Sum_probs=19.6
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCCCEEEecC
Q 044507 26 VILFLHGFPELWYSWRHQITALASLGYRAVAPD 58 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 58 (157)
.|++ -|...+......+++.+.+.||.+.+.-
T Consensus 95 nii~-E~tl~~~~~~~~~~~~~k~~GY~v~l~~ 126 (199)
T PF06414_consen 95 NIIF-EGTLSNPSKLRKLIREAKAAGYKVELYY 126 (199)
T ss_dssp -EEE-E--TTSSHHHHHHHHHHHCTT-EEEEEE
T ss_pred CEEE-ecCCCChhHHHHHHHHHHcCCceEEEEE
Confidence 4444 5655666666668889999999876654
No 445
>PF13383 Methyltransf_22: Methyltransferase domain
Probab=21.26 E-value=2.3e+02 Score=19.86 Aligned_cols=36 Identities=19% Similarity=0.509 Sum_probs=29.3
Q ss_pred CCEEEEeCCCCCchhhHHHHHHHHHhCCCEEEecCC
Q 044507 24 GPVILFLHGFPELWYSWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (157)
...+|=+|+.+.....+..+.+.|.+.||+.+-.+.
T Consensus 192 ~Qi~iEiH~~~~~~~~~~~~l~~l~~~gfr~F~~e~ 227 (242)
T PF13383_consen 192 CQILIEIHGWPSEHREWYKLLQELEKAGFRLFNVEP 227 (242)
T ss_pred cEEEEEEEeCccchhHHHHHHHHHHHCCcEEEEecC
Confidence 456666999887777788899999999999987765
No 446
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=21.21 E-value=2.5e+02 Score=18.37 Aligned_cols=56 Identities=11% Similarity=0.238 Sum_probs=31.2
Q ss_pred eEEEECCEEEEEeecCCCCEEEEeCCCC--CchhhH---HHHHHHHHhCCCEEEecCCCCCC
Q 044507 7 RIVKVNGINMHIAEKGQGPVILFLHGFP--ELWYSW---RHQITALASLGYRAVAPDLRGFG 63 (157)
Q Consensus 7 ~~~~~~g~~~~~~~~~~~p~vl~~hG~~--~~~~~~---~~~~~~l~~~g~~v~~~d~~g~g 63 (157)
....++|..+....... .+|+++.-.. +-..+| ..+-+...++|+.|+.+----++
T Consensus 9 ~~~~~~G~~~~l~~~~G-kVlLIVNtASkCGfTpQYegLe~Ly~ky~~~Gf~VLgFPcNQF~ 69 (162)
T COG0386 9 SVKDIDGEPVSLSDYKG-KVLLIVNTASKCGFTPQYEGLEALYKKYKDKGFEVLGFPCNQFG 69 (162)
T ss_pred eeeccCCCCccHHHhCC-cEEEEEEcccccCCcHhHHHHHHHHHHHhhCCcEEEeccccccc
Confidence 44555676666655543 4666665332 222345 44456667789988776443333
No 447
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=21.13 E-value=57 Score=20.74 Aligned_cols=13 Identities=23% Similarity=0.465 Sum_probs=11.4
Q ss_pred EEEEEEcHHHHHH
Q 044507 97 VFVVGHDWGAFMA 109 (157)
Q Consensus 97 i~l~G~S~Gg~~a 109 (157)
..++|.|.|+++.
T Consensus 70 ~vi~G~SAGA~i~ 82 (154)
T PF03575_consen 70 GVIIGTSAGAMIL 82 (154)
T ss_dssp SEEEEETHHHHCT
T ss_pred CEEEEEChHHhhc
Confidence 7888999999875
No 448
>TIGR01287 nifH nitrogenase iron protein. This model describes nitrogenase (EC 1.18.6.1) iron protein, also called nitrogenase reductase or nitrogenase component II. This model includes molybdenum-iron nitrogenase reductase (nifH), vanadium-iron nitrogenase reductase (vnfH), and iron-iron nitrogenase reductase (anfH). The model excludes the homologous protein from the light-independent protochlorophyllide reductase.
Probab=21.12 E-value=2.8e+02 Score=19.39 Aligned_cols=32 Identities=19% Similarity=0.095 Sum_probs=22.9
Q ss_pred CCCCchhh--HHHHHHHHHhCCCEEEecCCCCCC
Q 044507 32 GFPELWYS--WRHQITALASLGYRAVAPDLRGFG 63 (157)
Q Consensus 32 G~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g~g 63 (157)
|-||.... -..++..|+++|++|..+|.-..+
T Consensus 7 gKGGVGKTT~a~nLA~~La~~G~~VlliD~D~q~ 40 (275)
T TIGR01287 7 GKGGIGKSTTTQNIAAALAEMGKKVMIVGCDPKA 40 (275)
T ss_pred CCCcCcHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 65554433 366788899999999999875444
No 449
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=21.11 E-value=1.6e+02 Score=16.12 Aligned_cols=11 Identities=27% Similarity=0.579 Sum_probs=8.2
Q ss_pred CCEEEEeCCCC
Q 044507 24 GPVILFLHGFP 34 (157)
Q Consensus 24 ~p~vl~~hG~~ 34 (157)
.|.++++||..
T Consensus 31 ~~~~~lvhGga 41 (71)
T PF10686_consen 31 HPDMVLVHGGA 41 (71)
T ss_pred CCCEEEEECCC
Confidence 37778888866
No 450
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]
Probab=21.09 E-value=1.6e+02 Score=22.51 Aligned_cols=34 Identities=9% Similarity=0.115 Sum_probs=25.7
Q ss_pred CCcEEEEEEcHHHHHHHHHHhcCccceeEEEEeec
Q 044507 94 DEKVFVVGHDWGAFMAWFLCLFRPDRVKALVNLSV 128 (157)
Q Consensus 94 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~i~~~~ 128 (157)
..+++++|-.+||..++.-+.+.+ .-..+++++.
T Consensus 3 ~~~iVIlGgGfgGl~~a~~l~~~~-~~~~itLVd~ 36 (405)
T COG1252 3 KKRIVILGGGFGGLSAAKRLARKL-PDVEITLVDR 36 (405)
T ss_pred CceEEEECCcHHHHHHHHHhhhcC-CCCcEEEEeC
Confidence 468999999999999888888775 3223566654
No 451
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=21.02 E-value=3.1e+02 Score=19.32 Aligned_cols=25 Identities=12% Similarity=0.076 Sum_probs=19.4
Q ss_pred CCCcEEEEEEcHHHHHHHHHHhcCc
Q 044507 93 NDEKVFVVGHDWGAFMAWFLCLFRP 117 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~~a~~~~~~~~ 117 (157)
...+++++|..-.|.++..-+...+
T Consensus 48 ~ggrl~~~GaGtSg~la~~da~e~~ 72 (257)
T cd05007 48 AGGRLIYVGAGTSGRLGVLDASELP 72 (257)
T ss_pred cCCEEEEEcCcHHHHHHHHHHHhcc
Confidence 4579999999999988876665544
No 452
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=20.96 E-value=2.3e+02 Score=19.22 Aligned_cols=38 Identities=24% Similarity=0.058 Sum_probs=24.9
Q ss_pred EEEEeCCCCCc--hhhHHHHHHHHHhCCCEEEecCCCCCC
Q 044507 26 VILFLHGFPEL--WYSWRHQITALASLGYRAVAPDLRGFG 63 (157)
Q Consensus 26 ~vl~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g 63 (157)
+|.+..+-||. ...-..++..|+++|++|..+|.-..+
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la~~g~~VlliD~D~q~ 42 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALKLLGEPVLAIDLDPQN 42 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 34455544443 344466778888899999999875443
No 453
>PF08902 DUF1848: Domain of unknown function (DUF1848); InterPro: IPR014998 This group of proteins are functionally uncharacterised. The C terminus contains a cluster of cysteines that are similar to the iron-sulphur cluster found at the N terminus of IPR007197 from INTERPRO.
Probab=20.89 E-value=3.3e+02 Score=19.56 Aligned_cols=60 Identities=17% Similarity=0.207 Sum_probs=38.0
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCCCEE-EecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 044507 26 VILFLHGFPELWYSWRHQITALASLGYRA-VAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVA 91 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g~~v-~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~ 91 (157)
.|||-. -+...+.+..+.|.+.||.. +.+-.-++|..-++ ...+.++.++.+.++-+.+.
T Consensus 50 ~iVFWT---Knp~P~l~~L~~l~~~gy~~yfq~Tit~Y~~~lEp---~vP~~~~~i~~f~~Ls~~iG 110 (266)
T PF08902_consen 50 CIVFWT---KNPAPFLPYLDELDERGYPYYFQFTITGYGKDLEP---NVPPKDERIETFRELSERIG 110 (266)
T ss_pred EEEEec---CCcHHHHhhHHHHHhCCCceEEEEEeCCCCccccC---CCCCHHHHHHHHHHHHHHHC
Confidence 555543 23334556677888888765 44455667766443 35567777888888888883
No 454
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=20.86 E-value=1.8e+02 Score=16.52 Aligned_cols=27 Identities=19% Similarity=0.089 Sum_probs=15.1
Q ss_pred CCEEEEeCCCCCchhhHHHHHHHHHhCCCEE
Q 044507 24 GPVILFLHGFPELWYSWRHQITALASLGYRA 54 (157)
Q Consensus 24 ~p~vl~~hG~~~~~~~~~~~~~~l~~~g~~v 54 (157)
+|+|+++... ..+ ...+..|.+.||.+
T Consensus 62 ~~ivv~C~~G-~rs---~~aa~~L~~~G~~~ 88 (100)
T cd01523 62 QEVTVICAKE-GSS---QFVAELLAERGYDV 88 (100)
T ss_pred CeEEEEcCCC-CcH---HHHHHHHHHcCcee
Confidence 4555555433 222 34466778889984
No 455
>cd02966 TlpA_like_family TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.
Probab=20.82 E-value=1.7e+02 Score=16.37 Aligned_cols=49 Identities=8% Similarity=0.013 Sum_probs=25.5
Q ss_pred ECCEEEEEeecCCCCEEEEeCCCCCchh-----hHHHHHHHHHhCCCEEEecCC
Q 044507 11 VNGINMHIAEKGQGPVILFLHGFPELWY-----SWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 11 ~~g~~~~~~~~~~~p~vl~~hG~~~~~~-----~~~~~~~~l~~~g~~v~~~d~ 59 (157)
.+|..+......+++++|++.+..+... .+..+.+.+.+.+..++.++.
T Consensus 7 ~~g~~~~~~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~~v~~ 60 (116)
T cd02966 7 LDGKPVSLSDLKGKVVLVNFWASWCPPCRAEMPELEALAKEYKDDGVEVVGVNV 60 (116)
T ss_pred CCCCEeehHHcCCCEEEEEeecccChhHHHHhHHHHHHHHHhCCCCeEEEEEEC
Confidence 4555555444445677777776554321 112223333334577777765
No 456
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=20.71 E-value=1.6e+02 Score=21.74 Aligned_cols=30 Identities=23% Similarity=0.346 Sum_probs=22.7
Q ss_pred EEEEeCCCCCchhhHHHHHHHHHhCCCEEEec
Q 044507 26 VILFLHGFPELWYSWRHQITALASLGYRAVAP 57 (157)
Q Consensus 26 ~vl~~hG~~~~~~~~~~~~~~l~~~g~~v~~~ 57 (157)
..+++.|..|-...| +++.|.++||.|..-
T Consensus 7 ~~VcVTGAsGfIgsw--ivk~LL~rGY~V~gt 36 (327)
T KOG1502|consen 7 KKVCVTGASGFIGSW--IVKLLLSRGYTVRGT 36 (327)
T ss_pred cEEEEeCCchHHHHH--HHHHHHhCCCEEEEE
Confidence 578888888866665 477888889988654
No 457
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=20.68 E-value=1.1e+02 Score=18.89 Aligned_cols=20 Identities=25% Similarity=0.446 Sum_probs=17.3
Q ss_pred HHHHHHHHHhCCCEEEecCC
Q 044507 40 WRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 40 ~~~~~~~l~~~g~~v~~~d~ 59 (157)
+...++.|+++|+.+++.|-
T Consensus 25 ~~~VA~~L~e~g~dv~atDI 44 (129)
T COG1255 25 FLDVAKRLAERGFDVLATDI 44 (129)
T ss_pred HHHHHHHHHHcCCcEEEEec
Confidence 56678999999999999986
No 458
>TIGR01279 DPOR_bchN light-independent protochlorophyllide reductase, N subunit. This enzyme describes the N subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme involved in bacteriochlorophyll biosynthesis. This subunit shows homology to the nitrogenase molybdenum-iron protein NifN.
Probab=20.56 E-value=3.9e+02 Score=20.30 Aligned_cols=42 Identities=17% Similarity=0.245 Sum_probs=26.8
Q ss_pred CCEEEEeCCCCC---chhhHHHHHHHHHh-CCCEEEecCCCCCCCC
Q 044507 24 GPVILFLHGFPE---LWYSWRHQITALAS-LGYRAVAPDLRGFGDT 65 (157)
Q Consensus 24 ~p~vl~~hG~~~---~~~~~~~~~~~l~~-~g~~v~~~d~~g~g~s 65 (157)
.|-+|++..... -.++...+++.+.+ .|..|+.++-+|+..+
T Consensus 84 ~P~~I~V~tTC~se~IGDDi~~v~~~~~~~~~~pVi~v~tpgf~g~ 129 (407)
T TIGR01279 84 NPSVIFLLSSCTPEVIKMDLEGLAERLSTNFGVPVLFAPASGLDYT 129 (407)
T ss_pred CCCEEEEECCchHHHHHhhHHHHHHHHHHhhCCCEEEeeCCCcccc
Confidence 366666665532 24456666666654 3788999988887543
No 459
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=20.54 E-value=4.1e+02 Score=20.58 Aligned_cols=70 Identities=9% Similarity=0.069 Sum_probs=39.6
Q ss_pred HHHHHhCCCEEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcEEEEEEcHHHHHHHHHHhcCcc--cee
Q 044507 44 ITALASLGYRAVAPDLRGFGDTDAPPDVTSYTCFHVIGDLVGLIDTVAPNDEKVFVVGHDWGAFMAWFLCLFRPD--RVK 121 (157)
Q Consensus 44 ~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~--~~~ 121 (157)
.+.+.+.+|.++.+|-+|.... -.....++..+.+.. .+..+.++-.++-|.-+...+..+.+ .+.
T Consensus 175 l~~~~~~~~DvViIDTaGr~~~----------d~~lm~El~~i~~~~--~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~ 242 (429)
T TIGR01425 175 VEKFKKENFDIIIVDTSGRHKQ----------EDSLFEEMLQVAEAI--QPDNIIFVMDGSIGQAAEAQAKAFKDSVDVG 242 (429)
T ss_pred HHHHHhCCCCEEEEECCCCCcc----------hHHHHHHHHHHhhhc--CCcEEEEEeccccChhHHHHHHHHHhccCCc
Confidence 3445556799999998874322 122345555555444 45567777777666555555544322 245
Q ss_pred EEEE
Q 044507 122 ALVN 125 (157)
Q Consensus 122 ~~i~ 125 (157)
++|+
T Consensus 243 g~Il 246 (429)
T TIGR01425 243 SVII 246 (429)
T ss_pred EEEE
Confidence 5554
No 460
>PLN02399 phospholipid hydroperoxide glutathione peroxidase
Probab=20.54 E-value=2.5e+02 Score=19.58 Aligned_cols=50 Identities=8% Similarity=0.076 Sum_probs=28.0
Q ss_pred ECCEEEEEeecCCCCEEEEeCCCCCchh-----hHHHHHHHHHhCCCEEEecCCC
Q 044507 11 VNGINMHIAEKGQGPVILFLHGFPELWY-----SWRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 11 ~~g~~~~~~~~~~~p~vl~~hG~~~~~~-----~~~~~~~~l~~~g~~v~~~d~~ 60 (157)
.+|..+.......+++||.+-..++... ....+.+...++|+.++.++..
T Consensus 87 ~~G~~vsLsd~kGK~vvl~FwAswCp~c~~e~p~L~~L~~~~~~~Gv~VIgV~~d 141 (236)
T PLN02399 87 IDGKDVALSKFKGKVLLIVNVASKCGLTSSNYSELSHLYEKYKTQGFEILAFPCN 141 (236)
T ss_pred CCCCEEeHHHhCCCeEEEEEEcCCCcchHHHHHHHHHHHHHHhcCCcEEEEEecc
Confidence 4565555444444566666554443322 2244455566678999888753
No 461
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=20.46 E-value=4e+02 Score=20.34 Aligned_cols=29 Identities=10% Similarity=0.048 Sum_probs=21.9
Q ss_pred hhhHHHHHHHHHh-----CCCEEEecCCCCCCCC
Q 044507 37 WYSWRHQITALAS-----LGYRAVAPDLRGFGDT 65 (157)
Q Consensus 37 ~~~~~~~~~~l~~-----~g~~v~~~d~~g~g~s 65 (157)
..+...+++.+.+ .|..++.++-+|+..+
T Consensus 97 GdDi~~v~~~~~~~~~~~~~~~vi~v~tpgf~g~ 130 (428)
T cd01965 97 GDDVAGFIKEFRAEGPEPADFPVVYASTPSFKGS 130 (428)
T ss_pred CCCHHHHHHHHHhhccCCCCCeEEEeeCCCCCCc
Confidence 4567777888875 4788999988887654
No 462
>PTZ00253 tryparedoxin peroxidase; Provisional
Probab=20.38 E-value=2.5e+02 Score=18.71 Aligned_cols=46 Identities=11% Similarity=0.140 Sum_probs=27.8
Q ss_pred EEEEEeecCCCCEEEEeCC-CCCc-----hhhHHHHHHHHHhCCCEEEecCC
Q 044507 14 INMHIAEKGQGPVILFLHG-FPEL-----WYSWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 14 ~~~~~~~~~~~p~vl~~hG-~~~~-----~~~~~~~~~~l~~~g~~v~~~d~ 59 (157)
..+.......+++||+++. ..+. ...+..+.+.+.++|+.++.++.
T Consensus 27 ~~v~l~d~~Gk~~lL~F~p~~~~~~C~~e~~~l~~~~~~f~~~g~~vv~IS~ 78 (199)
T PTZ00253 27 KKISLSSYKGKWVVLFFYPLDFTFVCPTEIIQFSDSVKRFNELNCEVLACSM 78 (199)
T ss_pred cEEeHHHHCCCEEEEEEEcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 4555444444567777774 2221 12345567778888999998874
No 463
>cd03017 PRX_BCP Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides. The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein, Dot5p (for disrupter of telomere silencing protein 5), w
Probab=20.28 E-value=2.2e+02 Score=17.24 Aligned_cols=50 Identities=14% Similarity=0.233 Sum_probs=28.3
Q ss_pred EECCEEEEEeecCCCCEEEEeC-CCCCc--h---hhHHHHHHHHHhCCCEEEecCC
Q 044507 10 KVNGINMHIAEKGQGPVILFLH-GFPEL--W---YSWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 10 ~~~g~~~~~~~~~~~p~vl~~h-G~~~~--~---~~~~~~~~~l~~~g~~v~~~d~ 59 (157)
+.+|..+.......+++||++- +..+. . ..+..+.+.+.+.|+.++.+..
T Consensus 10 ~~~g~~~~l~~~~gk~~ll~f~~~~~cp~C~~~~~~l~~~~~~~~~~~~~vv~is~ 65 (140)
T cd03017 10 DQDGETVSLSDLRGKPVVLYFYPKDDTPGCTKEACDFRDLYEEFKALGAVVIGVSP 65 (140)
T ss_pred CCCCCEEeHHHhCCCcEEEEEeCCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 3456666655444566666654 44322 1 2234455666667888888873
No 464
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=20.26 E-value=1.7e+02 Score=21.53 Aligned_cols=30 Identities=17% Similarity=0.195 Sum_probs=19.8
Q ss_pred EEEeCCCC-CchhhHHHHHHHHHhCCCEEEecCC
Q 044507 27 ILFLHGFP-ELWYSWRHQITALASLGYRAVAPDL 59 (157)
Q Consensus 27 vl~~hG~~-~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (157)
.-.+.|.+ +-...| +.+|+++|++|+.+..
T Consensus 51 WAVVTGaTDGIGKay---A~eLAkrG~nvvLIsR 81 (312)
T KOG1014|consen 51 WAVVTGATDGIGKAY---ARELAKRGFNVVLISR 81 (312)
T ss_pred EEEEECCCCcchHHH---HHHHHHcCCEEEEEeC
Confidence 33444443 333444 8899999999988864
No 465
>CHL00175 minD septum-site determining protein; Validated
Probab=20.13 E-value=3e+02 Score=19.35 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=25.4
Q ss_pred CEEEEeCCCCCchhh--HHHHHHHHHhCCCEEEecCCC
Q 044507 25 PVILFLHGFPELWYS--WRHQITALASLGYRAVAPDLR 60 (157)
Q Consensus 25 p~vl~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~ 60 (157)
.+|.+..|-||.... -..++..|++.|++|+.+|.-
T Consensus 16 ~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 16 RIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred eEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 366666666655443 356678888899999998764
No 466
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=20.06 E-value=2.9e+02 Score=18.67 Aligned_cols=15 Identities=20% Similarity=0.262 Sum_probs=10.5
Q ss_pred CCCcEEEEEEcHHHH
Q 044507 93 NDEKVFVVGHDWGAF 107 (157)
Q Consensus 93 ~~~~i~l~G~S~Gg~ 107 (157)
+.-..+++-||+||.
T Consensus 122 d~~~~~~i~~slgGG 136 (216)
T PF00091_consen 122 DSLDGFFIVHSLGGG 136 (216)
T ss_dssp TTESEEEEEEESSSS
T ss_pred cccccceecccccce
Confidence 445677777888776
Done!