Query 044512
Match_columns 230
No_of_seqs 111 out of 1274
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 06:24:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044512.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044512hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ljs_A Fructokinase; fructokia 100.0 3.6E-41 1.2E-45 273.5 15.8 227 1-227 57-297 (338)
2 3iq0_A Putative ribokinase II; 100.0 1.1E-39 3.7E-44 263.9 21.6 225 1-228 58-282 (330)
3 3pl2_A Sugar kinase, ribokinas 100.0 3.3E-39 1.1E-43 260.0 21.1 225 1-228 62-287 (319)
4 2qcv_A Putative 5-dehydro-2-de 100.0 1.4E-38 4.8E-43 257.6 24.1 228 1-228 65-295 (332)
5 4du5_A PFKB; structural genomi 100.0 4.2E-39 1.4E-43 261.0 20.7 226 1-228 79-307 (336)
6 4e69_A 2-dehydro-3-deoxyglucon 100.0 2.7E-38 9.3E-43 255.4 21.2 225 1-228 73-301 (328)
7 3lhx_A Ketodeoxygluconokinase; 100.0 2.3E-38 7.8E-43 255.0 20.1 226 1-228 54-288 (319)
8 3hj6_A Fructokinase, FRK; fruc 100.0 1.5E-39 5.3E-44 262.7 13.2 222 1-227 75-296 (327)
9 1v1a_A 2-keto-3-deoxygluconate 100.0 1.1E-37 3.8E-42 250.0 22.6 217 1-227 54-272 (309)
10 2v78_A Fructokinase; transfera 100.0 4.1E-38 1.4E-42 252.9 18.6 221 1-227 54-279 (313)
11 1tyy_A Putative sugar kinase; 100.0 8.4E-39 2.9E-43 259.5 14.6 223 1-227 71-298 (339)
12 3ktn_A Carbohydrate kinase, PF 100.0 1.2E-37 4E-42 253.6 21.1 227 1-228 55-302 (346)
13 4e3a_A Sugar kinase protein; s 100.0 1.5E-37 5.3E-42 253.1 20.6 218 1-227 101-321 (352)
14 2dcn_A Hypothetical fructokina 100.0 2.2E-37 7.4E-42 248.5 18.7 219 1-227 54-277 (311)
15 3h49_A Ribokinase; transferase 100.0 8.4E-37 2.9E-41 246.5 20.1 220 1-228 64-284 (325)
16 3loo_A Anopheles gambiae adeno 100.0 9.5E-37 3.3E-41 249.7 17.6 217 1-227 104-338 (365)
17 3vas_A Putative adenosine kina 100.0 6.7E-37 2.3E-41 251.0 16.4 219 1-228 105-342 (370)
18 3otx_A Adenosine kinase, putat 100.0 2.2E-36 7.6E-41 246.1 17.6 217 1-227 90-322 (347)
19 2rbc_A Sugar kinase, AGR_C_456 100.0 8.9E-36 3.1E-40 241.9 20.4 208 1-228 87-298 (343)
20 2qhp_A Fructokinase; NP_810670 100.0 3.4E-36 1.2E-40 239.9 17.2 219 1-227 45-268 (296)
21 3ry7_A Ribokinase; transferase 100.0 8.4E-36 2.9E-40 238.5 18.2 210 1-227 61-276 (304)
22 3ewm_A Uncharacterized sugar k 100.0 1.4E-35 4.9E-40 238.1 19.3 215 1-228 54-271 (313)
23 2afb_A 2-keto-3-deoxygluconate 100.0 7.4E-35 2.5E-39 237.5 22.7 225 1-227 65-313 (351)
24 1rkd_A Ribokinase; carbohydrat 100.0 3.1E-35 1.1E-39 235.8 18.7 210 1-227 62-276 (309)
25 2fv7_A Ribokinase; structural 100.0 6.3E-35 2.1E-39 236.1 18.1 211 1-227 82-301 (331)
26 4gm6_A PFKB family carbohydrat 100.0 8.2E-35 2.8E-39 237.2 17.1 226 1-228 77-315 (351)
27 2c4e_A Sugar kinase MJ0406; tr 100.0 4.4E-35 1.5E-39 234.1 15.1 206 1-228 63-269 (302)
28 1bx4_A Protein (adenosine kina 100.0 7.8E-35 2.7E-39 236.8 16.7 217 1-227 88-321 (345)
29 3kzh_A Probable sugar kinase; 100.0 6.1E-35 2.1E-39 235.9 14.8 211 1-227 63-278 (328)
30 2nwh_A AGR_C_3442P, carbohydra 100.0 1.3E-34 4.5E-39 232.9 16.2 212 1-227 60-276 (317)
31 3uq6_A Adenosine kinase, putat 100.0 3.2E-34 1.1E-38 235.2 17.3 218 2-228 108-344 (372)
32 2abs_A Adenosine kinase, AK; r 100.0 3.4E-34 1.1E-38 236.1 15.5 217 1-227 112-359 (383)
33 3ikh_A Carbohydrate kinase; tr 100.0 2.6E-34 9E-39 229.3 13.9 194 1-227 60-257 (299)
34 3ie7_A LIN2199 protein; phosph 100.0 2.1E-33 7.3E-38 226.1 18.7 206 1-227 60-274 (320)
35 3go6_A Ribokinase RBSK; phosph 100.0 1.6E-33 5.4E-38 225.8 17.3 193 1-227 77-273 (310)
36 1vm7_A Ribokinase; TM0960, str 100.0 3.4E-33 1.2E-37 224.0 18.7 205 1-228 73-280 (311)
37 3b1n_A Ribokinase, putative; r 100.0 1.1E-33 3.8E-38 228.2 14.8 206 1-228 68-275 (326)
38 2pkf_A Adenosine kinase; trans 100.0 1.3E-33 4.6E-38 228.5 14.6 207 1-227 78-288 (334)
39 4e84_A D-beta-D-heptose 7-phos 100.0 1.6E-33 5.6E-38 229.3 12.5 210 1-228 114-328 (352)
40 3umo_A 6-phosphofructokinase i 100.0 1.4E-32 4.7E-37 220.4 17.3 207 1-227 59-277 (309)
41 2jg1_A Tagatose-6-phosphate ki 100.0 1.2E-32 4.2E-37 222.5 17.0 206 1-227 77-295 (330)
42 2hlz_A Ketohexokinase; non-pro 100.0 2.4E-32 8.1E-37 219.2 17.9 207 1-228 75-294 (312)
43 3cqd_A 6-phosphofructokinase i 100.0 2.3E-32 7.9E-37 219.0 16.3 207 1-228 59-278 (309)
44 2abq_A Fructose 1-phosphate ki 100.0 4.1E-32 1.4E-36 217.3 16.7 205 1-227 57-270 (306)
45 2ajr_A Sugar kinase, PFKB fami 100.0 3.7E-32 1.2E-36 219.8 13.8 207 1-227 72-295 (331)
46 2f02_A Tagatose-6-phosphate ki 100.0 1.1E-31 3.9E-36 216.3 16.4 207 1-228 59-279 (323)
47 2jg5_A Fructose 1-phosphate ki 100.0 2.5E-31 8.6E-36 212.7 16.4 206 1-228 57-271 (306)
48 3bf5_A Ribokinase related prot 100.0 7E-32 2.4E-36 215.8 10.1 192 1-228 77-268 (306)
49 3kd6_A Carbohydrate kinase, PF 100.0 4.7E-30 1.6E-34 206.0 16.7 208 1-227 50-265 (313)
50 1vk4_A PFKB carbohydrate kinas 100.0 2E-30 6.7E-35 206.8 10.3 202 1-228 57-269 (298)
51 2yxt_A Pyridoxal kinase; beta 99.9 3.5E-26 1.2E-30 183.3 10.6 201 1-227 17-257 (312)
52 2ddm_A Pyridoxine kinase; pyri 99.9 7.4E-26 2.5E-30 179.1 11.9 203 2-227 29-254 (283)
53 1ub0_A THID, phosphomethylpyri 99.9 6.2E-22 2.1E-26 154.5 14.2 148 73-227 70-231 (258)
54 1jxh_A Phosphomethylpyrimidine 99.9 7.2E-22 2.5E-26 156.5 13.7 147 74-227 95-256 (288)
55 3mbh_A Putative phosphomethylp 99.9 2.9E-21 9.8E-26 153.0 13.7 152 73-227 77-246 (291)
56 3pzs_A PM kinase, pyridoxamine 99.9 4.9E-21 1.7E-25 151.7 14.1 153 71-227 75-247 (289)
57 2i5b_A Phosphomethylpyrimidine 99.9 5.3E-21 1.8E-25 150.3 14.1 150 73-227 74-237 (271)
58 3h74_A Pyridoxal kinase; PSI-I 99.8 1.4E-20 4.7E-25 148.3 13.2 150 73-227 74-236 (282)
59 3zs7_A Pyridoxal kinase; trans 99.8 3.2E-20 1.1E-24 147.4 13.2 151 72-227 75-249 (300)
60 3rm5_A Hydroxymethylpyrimidine 99.7 7.9E-17 2.7E-21 137.7 12.6 150 73-227 91-263 (550)
61 1ekq_A Hydroxyethylthiazole ki 99.7 2.5E-16 8.6E-21 123.4 13.5 152 69-227 54-219 (272)
62 1v8a_A Hydroxyethylthiazole ki 99.5 1.4E-13 4.9E-18 107.1 12.0 151 69-227 52-215 (265)
63 3dzv_A 4-methyl-5-(beta-hydrox 99.4 4.6E-11 1.6E-15 92.8 16.3 153 68-227 53-224 (273)
64 3bgk_A SMU.573, putative uncha 99.2 3.8E-11 1.3E-15 95.4 8.0 140 70-227 122-273 (311)
65 2r3b_A YJEF-related protein; p 99.2 2.8E-10 9.7E-15 90.3 11.5 139 70-227 108-256 (310)
66 3rpz_A ADP/ATP-dependent NAD(P 98.9 1.3E-08 4.4E-13 79.4 12.3 142 70-227 95-240 (279)
67 3nl6_A Thiamine biosynthetic b 98.9 7.2E-08 2.5E-12 81.9 15.9 149 69-226 301-489 (540)
68 3rss_A Putative uncharacterize 98.9 5.3E-09 1.8E-13 88.1 8.7 145 69-227 316-464 (502)
69 3hpd_A Hydroxyethylthiazole ki 98.8 7.8E-08 2.7E-12 74.1 13.2 150 69-226 52-214 (265)
70 3drw_A ADP-specific phosphofru 98.3 7.5E-05 2.6E-09 61.9 17.0 75 73-151 236-319 (474)
71 1ua4_A Glucokinase, ADP-depend 97.9 0.0011 3.9E-08 54.9 17.0 74 72-150 224-301 (455)
72 3k5w_A Carbohydrate kinase; 11 97.8 5.7E-05 1.9E-09 63.2 7.5 137 71-227 290-436 (475)
73 1l2l_A ADP-dependent glucokina 97.4 0.019 6.4E-07 47.6 16.9 72 72-148 227-302 (457)
74 1gc5_A ADP-dependent glucokina 97.2 0.04 1.4E-06 45.8 17.0 73 72-149 232-313 (467)
75 2fcj_A Small toprim domain pro 68.3 11 0.00036 25.0 4.9 80 73-167 26-105 (119)
76 3can_A Pyruvate-formate lyase- 54.1 52 0.0018 22.8 11.9 72 91-170 19-95 (182)
77 2yci_X 5-methyltetrahydrofolat 50.6 80 0.0027 24.0 9.9 64 71-143 45-110 (271)
78 1vp8_A Hypothetical protein AF 49.2 72 0.0025 23.0 7.0 90 75-175 16-106 (201)
79 2dgb_A Hypothetical protein PU 49.1 14 0.0005 22.5 2.8 30 5-40 17-46 (84)
80 3c8f_A Pyruvate formate-lyase 44.6 86 0.0029 22.6 9.3 74 91-170 85-163 (245)
81 3rhe_A NAD-dependent benzaldeh 41.5 71 0.0024 21.2 5.8 48 7-56 79-126 (148)
82 1vq3_A Phosphoribosylformylgly 40.2 20 0.00067 22.6 2.4 32 5-41 29-60 (94)
83 2rk0_A Glyoxalase/bleomycin re 39.9 71 0.0024 20.5 5.5 43 8-53 85-127 (136)
84 1ztd_A Hypothetical protein PF 38.4 17 0.00058 23.5 1.9 28 199-226 64-92 (133)
85 1gtd_A MTH169; synthetase, FGA 38.4 18 0.00061 22.2 2.0 30 5-40 16-45 (85)
86 3e5d_A Putative glyoxalase I; 38.3 72 0.0025 19.9 5.4 42 9-51 85-126 (127)
87 2yx5_A UPF0062 protein MJ1593; 37.6 20 0.00069 21.8 2.1 30 5-40 15-45 (83)
88 3ke2_A Uncharacterized protein 35.3 31 0.0011 22.5 2.8 42 138-179 32-73 (117)
89 1xqa_A Glyoxalase/bleomycin re 35.0 78 0.0027 19.4 5.8 40 8-51 73-112 (113)
90 4gym_A Glyoxalase/bleomycin re 34.8 95 0.0033 20.3 5.6 46 9-56 91-136 (149)
91 2jgq_A Triosephosphate isomera 34.7 50 0.0017 24.6 4.2 43 134-177 81-123 (233)
92 1t57_A Conserved protein MTH16 34.6 1.3E+02 0.0044 21.8 6.5 88 76-174 25-112 (206)
93 3ghj_A Putative integron gene 34.4 90 0.0031 20.3 5.4 42 9-51 98-139 (141)
94 3l7t_A SMU.1112C, putative unc 34.3 85 0.0029 19.6 5.4 41 9-50 92-132 (134)
95 1t4a_A PURS; tetramer, complex 34.1 28 0.00096 21.2 2.4 30 5-40 15-45 (84)
96 1yya_A Triosephosphate isomera 33.2 49 0.0017 24.9 4.0 43 134-177 86-128 (250)
97 1o5x_A TIM, triosephosphate is 33.2 55 0.0019 24.6 4.3 43 134-177 87-129 (248)
98 3th6_A Triosephosphate isomera 33.0 48 0.0016 25.0 3.9 43 134-177 87-129 (249)
99 2vxn_A Triosephosphate isomera 33.0 49 0.0017 24.9 4.0 43 134-177 88-130 (251)
100 1r2r_A TIM, triosephosphate is 32.7 53 0.0018 24.7 4.2 43 134-177 87-129 (248)
101 1ney_A TIM, triosephosphate is 32.3 51 0.0017 24.8 4.0 43 134-177 86-128 (247)
102 3qst_A Triosephosphate isomera 31.9 51 0.0017 24.9 3.9 43 134-177 89-131 (255)
103 3m9y_A Triosephosphate isomera 31.8 52 0.0018 24.8 4.0 43 134-177 90-132 (254)
104 2yc6_A Triosephosphate isomera 31.8 51 0.0017 24.9 3.9 43 134-177 88-130 (257)
105 4ham_A LMO2241 protein; struct 31.6 64 0.0022 21.3 4.1 44 138-184 37-80 (134)
106 2i9e_A Triosephosphate isomera 31.0 54 0.0018 24.9 3.9 43 134-177 86-128 (259)
107 4gqr_A Pancreatic alpha-amylas 30.9 37 0.0013 27.8 3.4 23 90-112 76-98 (496)
108 2v5b_A Triosephosphate isomera 30.7 58 0.002 24.4 4.1 48 129-177 74-123 (244)
109 2j27_A Triosephosphate isomera 30.7 55 0.0019 24.7 3.9 43 134-177 87-129 (250)
110 1m6j_A TIM, TPI, triosephospha 30.2 50 0.0017 25.0 3.7 43 134-177 94-136 (261)
111 1i4n_A Indole-3-glycerol phosp 30.2 1.7E+02 0.0059 21.9 6.9 63 70-147 120-184 (251)
112 3ta6_A Triosephosphate isomera 29.7 60 0.0021 24.7 4.0 43 134-177 92-134 (267)
113 2iv2_X Formate dehydrogenase H 29.6 2.1E+02 0.0072 25.0 8.1 43 69-113 162-205 (715)
114 2p25_A Glyoxalase family prote 29.5 1E+02 0.0035 19.0 5.9 41 9-50 84-124 (126)
115 3krs_A Triosephosphate isomera 29.4 61 0.0021 24.8 4.0 43 134-177 110-152 (271)
116 3kol_A Oxidoreductase, glyoxal 28.8 1.2E+02 0.0041 19.6 5.7 43 8-52 108-150 (156)
117 4g1k_A Triosephosphate isomera 28.3 65 0.0022 24.6 4.0 43 134-177 112-154 (272)
118 1tre_A Triosephosphate isomera 28.2 66 0.0023 24.3 4.0 43 134-177 87-129 (255)
119 3iwt_A 178AA long hypothetical 28.2 42 0.0014 23.5 2.9 24 6-29 39-62 (178)
120 3kxq_A Triosephosphate isomera 27.9 67 0.0023 24.6 4.0 43 134-177 112-154 (275)
121 1mo0_A TIM, triosephosphate is 27.8 65 0.0022 24.6 3.9 43 134-177 106-148 (275)
122 3zq4_A Ribonuclease J 1, RNAse 27.8 2.8E+02 0.0095 23.4 9.1 123 71-207 321-450 (555)
123 2wqp_A Polysialic acid capsule 27.7 2.3E+02 0.0078 22.5 7.3 48 88-146 88-136 (349)
124 1b9b_A TIM, protein (triosepho 27.7 67 0.0023 24.3 3.9 43 134-177 88-130 (255)
125 3ey7_A Biphenyl-2,3-DIOL 1,2-d 27.2 1.2E+02 0.0039 19.0 4.9 44 9-52 84-129 (133)
126 1f9z_A Glyoxalase I; beta-alph 27.2 1.2E+02 0.0041 19.0 5.5 44 9-52 82-125 (135)
127 3huh_A Virulence protein STM31 27.0 1.2E+02 0.0042 19.7 5.1 44 9-52 97-142 (152)
128 3e48_A Putative nucleoside-dip 26.8 1.6E+02 0.0054 21.8 6.1 91 5-109 9-102 (289)
129 1aw2_A Triosephosphate isomera 26.5 65 0.0022 24.4 3.7 43 134-177 89-131 (256)
130 4g6x_A Glyoxalase/bleomycin re 26.3 1.4E+02 0.0048 19.7 5.3 40 10-51 110-149 (155)
131 4a29_A Engineered retro-aldol 26.2 1.9E+02 0.0067 21.8 6.2 63 71-148 124-187 (258)
132 1tqx_A D-ribulose-5-phosphate 26.0 67 0.0023 23.7 3.7 52 74-138 86-142 (227)
133 2btm_A TIM, protein (triosepho 25.7 68 0.0023 24.2 3.7 43 134-177 86-128 (252)
134 3s6d_A Putative triosephosphat 25.4 75 0.0026 24.8 3.9 43 134-177 140-182 (310)
135 3g8r_A Probable spore coat pol 25.3 2.5E+02 0.0084 22.3 7.0 48 88-146 75-123 (350)
136 3r6a_A Uncharacterized protein 24.8 1.3E+02 0.0043 19.8 4.8 42 9-52 76-117 (144)
137 3tqn_A Transcriptional regulat 24.4 1.1E+02 0.0037 19.4 4.1 44 138-184 32-75 (113)
138 2wgo_A Ranaspumin-2, RSN-2; cy 24.1 1E+02 0.0034 18.1 3.4 46 4-49 19-71 (98)
139 3r4q_A Lactoylglutathione lyas 23.9 1.6E+02 0.0056 19.5 5.4 44 7-52 88-131 (160)
140 1lwj_A 4-alpha-glucanotransfer 23.6 63 0.0022 26.3 3.5 25 90-114 69-93 (441)
141 2wc7_A Alpha amylase, catalyti 23.4 71 0.0024 26.4 3.8 24 90-113 102-125 (488)
142 3uh9_A Metallothiol transferas 23.3 1.2E+02 0.0042 19.5 4.5 44 8-52 75-118 (145)
143 1wpc_A Glucan 1,4-alpha-maltoh 23.3 61 0.0021 26.7 3.4 24 90-113 82-105 (485)
144 1ud2_A Amylase, alpha-amylase; 23.3 61 0.0021 26.7 3.4 24 90-113 80-103 (480)
145 1wza_A Alpha-amylase A; hydrol 23.2 71 0.0024 26.4 3.7 25 90-114 81-105 (488)
146 3bh4_A Alpha-amylase; calcium, 23.0 62 0.0021 26.7 3.4 24 90-113 78-101 (483)
147 4aie_A Glucan 1,6-alpha-glucos 23.0 61 0.0021 27.0 3.4 24 90-113 79-102 (549)
148 3l52_A Orotidine 5'-phosphate 22.9 2.6E+02 0.0088 21.4 7.6 48 91-142 82-134 (284)
149 2b0l_A GTP-sensing transcripti 22.8 1.5E+02 0.005 18.5 5.3 47 137-185 41-88 (102)
150 3bzy_B ESCU; auto cleavage pro 22.4 45 0.0015 20.3 1.8 21 3-23 23-43 (83)
151 4gh9_A Polymerase cofactor VP3 22.3 54 0.0018 21.6 2.2 26 201-226 58-83 (146)
152 1fob_A Beta-1,4-galactanase; B 22.1 1.5E+02 0.0051 23.2 5.2 25 88-112 57-81 (334)
153 2dh2_A 4F2 cell-surface antige 22.1 82 0.0028 25.6 3.8 24 90-113 81-104 (424)
154 2ek5_A Predicted transcription 22.1 1.3E+02 0.0044 19.7 4.2 43 139-184 28-70 (129)
155 1hvx_A Alpha-amylase; hydrolas 22.0 67 0.0023 26.8 3.4 24 90-113 81-104 (515)
156 3hpy_A Catechol 2,3-dioxygenas 22.0 2.6E+02 0.0087 21.0 6.8 43 10-53 228-271 (309)
157 3by6_A Predicted transcription 21.9 1.3E+02 0.0043 19.6 4.1 44 138-184 34-77 (126)
158 1g94_A Alpha-amylase; beta-alp 21.7 68 0.0023 26.2 3.3 23 90-112 64-86 (448)
159 3mcw_A Putative hydrolase; iso 21.3 31 0.001 24.8 1.0 20 91-110 39-58 (198)
160 1mxg_A Alpha amylase; hyperthe 21.2 73 0.0025 25.9 3.4 24 90-113 86-109 (435)
161 2lqo_A Putative glutaredoxin R 21.2 59 0.002 20.0 2.2 23 7-29 15-37 (92)
162 1ht6_A AMY1, alpha-amylase iso 21.1 74 0.0025 25.6 3.4 24 90-113 68-91 (405)
163 4e5s_A MCCFLIKE protein (BA_56 21.1 3E+02 0.01 21.5 7.7 51 90-140 29-84 (331)
164 2guy_A Alpha-amylase A; (beta- 21.0 73 0.0025 26.2 3.4 24 90-113 97-120 (478)
165 3gkx_A Putative ARSC family re 20.8 81 0.0028 20.5 3.0 25 7-31 15-39 (120)
166 1zl0_A Hypothetical protein PA 20.7 3E+02 0.01 21.3 7.2 69 70-140 13-86 (311)
167 1gcy_A Glucan 1,4-alpha-maltot 20.7 74 0.0025 26.7 3.4 24 90-113 92-115 (527)
168 3zw5_A Glyoxalase domain-conta 20.6 1.8E+02 0.0062 18.8 5.6 43 9-51 101-145 (147)
169 3sho_A Transcriptional regulat 20.5 2.1E+02 0.0073 19.5 7.7 92 69-179 34-126 (187)
170 1f6y_A 5-methyltetrahydrofolat 20.5 2.8E+02 0.0094 20.8 10.0 61 72-141 37-99 (262)
171 1vli_A Spore coat polysacchari 20.1 2.4E+02 0.0082 22.7 6.0 76 89-175 99-192 (385)
172 3neu_A LIN1836 protein; struct 20.1 1.4E+02 0.0049 19.3 4.1 43 139-184 37-79 (125)
No 1
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=3.6e-41 Score=273.45 Aligned_cols=227 Identities=33% Similarity=0.568 Sum_probs=191.9
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEEc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHYG 80 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 80 (230)
++||+|.+|+.+++.|+++||+++++.+.++.+|+.+++.++++|++++.+++..+++..++++++....+++++++|++
T Consensus 57 g~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 136 (338)
T 3ljs_A 57 GMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFSDALIFHAC 136 (338)
T ss_dssp SEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHHHTEEEEEEE
T ss_pred eeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHhcCCCEEEEC
Confidence 57999999999999999999999999887888999999999888999988877667777788888876678899999999
Q ss_pred cccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHHHH
Q 044512 81 SISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDDVV 160 (230)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~ 160 (230)
++.+..+.+.+.+.++++.+++.+.++++||+.+..+|.+.....+.+.++++++|++++|++|+..|+|....+.++++
T Consensus 137 ~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~ 216 (338)
T 3ljs_A 137 SNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADANAVI 216 (338)
T ss_dssp GGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHTSCHHHHH
T ss_pred ChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCChhHHHHH
Confidence 98888888889999999999999999999999888888655556778889999999999999999999986554434478
Q ss_pred HHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcC--------------CCccccc
Q 044512 161 MSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKD--------------ANIFNVK 226 (230)
Q Consensus 161 ~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g--------------~~~~~a~ 226 (230)
+.|++.|++.||||+|++|+++++++..+++++++++++||+||||+|+|||+++|++| +++++|.
T Consensus 217 ~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~~~~~~l~~al 296 (338)
T 3ljs_A 217 QQLWQGRAQLLLVTDAAGPVHWYTRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPESIVSTL 296 (338)
T ss_dssp HHHTTTTCCEEEEEETTEEEEEEESSCEEEECC-----------CHHHHHHHHHHHHHHCSSTHHHHHHHTCHHHHHHHH
T ss_pred HHHHhcCCCEEEEeeCCCceEEEECCceEEeCCCCCccCCCCCccHHHHHHHHHHHHhCCCcccchhccccChHHHHHHH
Confidence 88988999999999999999999999999999999999999999999999999999999 7888876
Q ss_pred c
Q 044512 227 F 227 (230)
Q Consensus 227 ~ 227 (230)
+
T Consensus 297 ~ 297 (338)
T 3ljs_A 297 R 297 (338)
T ss_dssp H
T ss_pred H
Confidence 4
No 2
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=1.1e-39 Score=263.93 Aligned_cols=225 Identities=24% Similarity=0.395 Sum_probs=195.6
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEEc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHYG 80 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 80 (230)
++||+|.+|+.+++.|++.||+++++.+.++.+|+.+++.++++|++++.+++...+...++++++....+++++++|++
T Consensus 58 ~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~s 137 (330)
T 3iq0_A 58 SCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDENILKDCTHFHIM 137 (330)
T ss_dssp EEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCGGGGTTEEEEEEE
T ss_pred EEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCHhHhccCCEEEEe
Confidence 46899999999999999999999999888888999999999888998666655555666677777777788999999999
Q ss_pred cccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHHHH
Q 044512 81 SISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDDVV 160 (230)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~ 160 (230)
++.+..+.+.+.+.++++.+++.+.++++||+.+..+|.. +...+.+.++++++|++++|+.|+..|+|.. +.++++
T Consensus 138 g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~-~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~--~~~~~~ 214 (330)
T 3iq0_A 138 GSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDI-PEMRDALHFVLELTDIYMPSEGEVLLLSPHS--TPERAI 214 (330)
T ss_dssp GGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGS-HHHHHHHHHHHHTCSEECCBGGGTTTTCSCS--SHHHHH
T ss_pred chhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCc-HHHHHHHHHHHhhCCEEecCHHHHHHHhCCC--CHHHHH
Confidence 9876677778889999999999999999999988777763 3366778899999999999999999999875 345678
Q ss_pred HHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCccccccc
Q 044512 161 MSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKFR 228 (230)
Q Consensus 161 ~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 228 (230)
+.|++.|++.||||+|++|+++++++..+++++++++++||+||||+|+|||+++|++|+++++|.++
T Consensus 215 ~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~ 282 (330)
T 3iq0_A 215 AGFLEEGVKEVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFDAHRALQY 282 (330)
T ss_dssp HHHHHHTCSEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHcCCCEEEEEeCCCceEEEECCceEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 88888999999999999999999988899999999999999999999999999999999999998753
No 3
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=3.3e-39 Score=259.98 Aligned_cols=225 Identities=23% Similarity=0.365 Sum_probs=198.0
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCc-cccccccccCccccccccEEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSA-DMLLKDSELNMGLIKQAKIFHY 79 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~v~~ 79 (230)
++||+|.+|+.+++.|+++||+++++...++.+|+.+++.++++|++.+.+++.+++ +..++++++....+++++++|+
T Consensus 62 ~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 141 (319)
T 3pl2_A 62 SRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSLDDVREADILWF 141 (319)
T ss_dssp EEEESSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCHHHHHHCSEEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCHHHhccCCEEEE
Confidence 468999999999999999999999998888889999999888888888887765555 6677778877778899999999
Q ss_pred ccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHHH
Q 044512 80 GSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDDV 159 (230)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~ 159 (230)
+++.+..+.+.+....+++.+++ +.++++||+.+..+|.++....+.+.++++++|++++|++|+..|+|... ..++
T Consensus 142 ~g~~~~~~~~~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~--~~~~ 218 (319)
T 3pl2_A 142 TLTGFSEEPSRGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGETE--PERA 218 (319)
T ss_dssp EGGGGSSTTHHHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSCCS--HHHH
T ss_pred ecccccCchhHHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCCCC--HHHH
Confidence 99876666666777777777665 66789999999889988888888899999999999999999999998753 4567
Q ss_pred HHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCccccccc
Q 044512 160 VMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKFR 228 (230)
Q Consensus 160 ~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 228 (230)
++.|++.|++.|+||+|++|+++++++..+++++++++++||+||||+|+|||++++++|+++++|.++
T Consensus 219 ~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~ 287 (319)
T 3pl2_A 219 GRALLERGVELAIVKQGPKGVMAMTKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWPLEKVLRF 287 (319)
T ss_dssp HHHHHHTTCSEEEEEEETTEEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHhcCCCEEEEEECCCCeEEEECCceEEeCCcccCCCCCcCchHHHHHHHHHHHHcCCCHHHHHHH
Confidence 888989999999999999999999988899999999999999999999999999999999999998753
No 4
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=1.4e-38 Score=257.61 Aligned_cols=228 Identities=22% Similarity=0.385 Sum_probs=195.4
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecC-CCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDN-HARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHY 79 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~-~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~ 79 (230)
++||+|.+|+.+++.|+++||+++++...+ +.+|+.+++.++.+|++.+.+++...++..+.++++....+++++++|+
T Consensus 65 ~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~ 144 (332)
T 2qcv_A 65 GKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYIRRSKLLLV 144 (332)
T ss_dssp EEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHHHHTTEEEEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHHHHccCCEEEE
Confidence 468999999999999999999999998764 4689999998777788887777655566677777776667789999999
Q ss_pred ccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCC-cchHH
Q 044512 80 GSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGD-AEKDD 158 (230)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~-~~~~~ 158 (230)
+++.+..+.+.+.+.++++.+++.+.++++||+.+...|..+....+.+.++++++|++++|+.|+..|+|... .+..+
T Consensus 145 ~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~ 224 (332)
T 2qcv_A 145 SGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTEKGDNDE 224 (332)
T ss_dssp EGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSSCCCHHH
T ss_pred eCccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCcCCCHHH
Confidence 99866666667888899999999999999999987777776666677788899999999999999999998752 23356
Q ss_pred HHHHHHhcCccEEEEEecCCceEEEec-CceeeecCccccccCCCCcchHHHHHHHHHHHcCCCccccccc
Q 044512 159 VVMSLWHDNLKLLLVTYGAKGCGYFTK-KFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKFR 228 (230)
Q Consensus 159 ~~~~l~~~g~~~vvvt~g~~g~~~~~~-~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 228 (230)
+++.|++.|++.||||+|++|++++++ +..+++++++++++||+||||+|+|||++++++|+++++|.++
T Consensus 225 ~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~l~~g~~~~~a~~~ 295 (332)
T 2qcv_A 225 TIRYLFKHSPELIVIKHGVEGSFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKGIETALKY 295 (332)
T ss_dssp HHHHHTTSSCSEEEEECGGGCEEEEETTSCEEEECCBCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEECCcceEEEecCCceEEcCCCCccccCCCCcHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 778888899999999999999999887 6788999999999999999999999999999999999998753
No 5
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=4.2e-39 Score=260.98 Aligned_cols=226 Identities=25% Similarity=0.384 Sum_probs=193.2
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCC-eeeEEEecCCCccccccccccCccccccccEEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNG-EREFMFYRNPSADMLLKDSELNMGLIKQAKIFHY 79 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~ 79 (230)
++||+|.+|+.+++.|++.||+++++.+.++.+|+.+++.++++| ++.+.+++..++...++++++....+++++++|+
T Consensus 79 g~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~v~~ 158 (336)
T 4du5_A 79 SRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWLLSARHLHA 158 (336)
T ss_dssp EEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCHHHHTTEEEEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCHhHhccCCEEEE
Confidence 468999999999999999999999998888889999999998888 4455566666777778888887778899999999
Q ss_pred ccccc-cCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHH
Q 044512 80 GSISL-ISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDD 158 (230)
Q Consensus 80 ~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~ 158 (230)
+++.. ..+.+.+.+.++++.+++.+.++++||+.+...|+......+.+.++++++|++++|+.|++.|+|... .++
T Consensus 159 ~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g~~~--~~~ 236 (336)
T 4du5_A 159 TGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETT--PEG 236 (336)
T ss_dssp ESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHCCCS--HHH
T ss_pred cCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhCCCC--HHH
Confidence 99754 466677888999999999999999999988888887666678889999999999999999999998753 456
Q ss_pred HHHHHHhcCccEEEEEecCCceEEEecCceeeecCcccc-ccCCCCcchHHHHHHHHHHHcCCCccccccc
Q 044512 159 VVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVK-TIDTTGAGDAFVGSFLVSVAKDANIFNVKFR 228 (230)
Q Consensus 159 ~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~-~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 228 (230)
+++.|.+.|++.||||+|++|+++++++..+++++++++ ++||+||||+|+|||+++|++|+++++|.++
T Consensus 237 ~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~~~~l~~g~~l~~a~~~ 307 (336)
T 4du5_A 237 VARFYRQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLGVPEAVKR 307 (336)
T ss_dssp HHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCC-------CHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHhcCCCEEEEEecCCceEEEECCeEEEeCCccCCCCCCCccchHHHHHHHHHHHHcCCCHHHHHHH
Confidence 788899999999999999999999998889999999997 9999999999999999999999999998753
No 6
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=100.00 E-value=2.7e-38 Score=255.37 Aligned_cols=225 Identities=22% Similarity=0.347 Sum_probs=193.9
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccc-cccccccCccccccccEEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADM-LLKDSELNMGLIKQAKIFHY 79 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~v~~ 79 (230)
++||+|.+|+.+++.|++.||+++++.+.++.+|+.+++.++ +|++++.+++...+.. .+...++....+++++++|+
T Consensus 73 g~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 151 (328)
T 4e69_A 73 SAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALAAAMARADVVYF 151 (328)
T ss_dssp CEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHHHHHHHTTCSEEEE
T ss_pred EeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccccchHHhcCCCEEEE
Confidence 579999999999999999999999998887778999999998 8999988876544332 22333333467889999999
Q ss_pred ccccc--cCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchH
Q 044512 80 GSISL--ISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKD 157 (230)
Q Consensus 80 ~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~ 157 (230)
+++.+ ..+.+.+.+.++++.+++.+.++++||+.+..+|+..+...+.+.++++++|++++|+.|++.|+|.. +.+
T Consensus 152 ~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~--~~~ 229 (328)
T 4e69_A 152 SGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGDA--GPD 229 (328)
T ss_dssp EHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHTCS--SHH
T ss_pred CCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcCCC--CHH
Confidence 98643 34667788899999999999999999998877887777778889999999999999999999999876 345
Q ss_pred HHHHHHHhcCccEEEEEecCCceEEEecCceeeecCcc-ccccCCCCcchHHHHHHHHHHHcCCCccccccc
Q 044512 158 DVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFS-VKTIDTTGAGDAFVGSFLVSVAKDANIFNVKFR 228 (230)
Q Consensus 158 ~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~-~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 228 (230)
++++.|.+.|++.||||+|++|+++++++..+++++++ ++++||+||||+|+|||+++|++|+++++|.++
T Consensus 230 ~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~l~~a~~~ 301 (328)
T 4e69_A 230 ATADRYARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDSVLAGQPLETAIAA 301 (328)
T ss_dssp HHHHHHHTTTCSEEEEBCTTSCEEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEeCCCCeEEEeCCceEEecCCCCCCccCCCChhHHHHHHHHHHHHCCCCHHHHHHH
Confidence 68888999999999999999999999998889999976 789999999999999999999999999998753
No 7
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=100.00 E-value=2.3e-38 Score=255.04 Aligned_cols=226 Identities=23% Similarity=0.339 Sum_probs=189.4
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCC-ccccccccccC--ccccccccEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPS-ADMLLKDSELN--MGLIKQAKIF 77 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~-~~~~~~~~~~~--~~~l~~~~~v 77 (230)
++||+|.+|+.+++.|+++||+++++.+.++.+|+.+++.++++|++++..++... ++..+++.+++ .+.+++++++
T Consensus 54 g~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 133 (319)
T 3lhx_A 54 TALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAICEELANFDYL 133 (319)
T ss_dssp CEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHHHHHTTCSEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHHHHhcCCCEE
Confidence 57999999999999999999999999888878999999999888999988876543 23334444332 2467899999
Q ss_pred EEccccc--cCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcc
Q 044512 78 HYGSISL--ISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAE 155 (230)
Q Consensus 78 ~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~ 155 (230)
|++++.+ ..+.+.+.+.++++.+++.+.++++||+++..+|+..+...+.+.++++++|++++|..|++.|+|.. +
T Consensus 134 ~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g~~--~ 211 (319)
T 3lhx_A 134 YLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQ--P 211 (319)
T ss_dssp EEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHCCC--C
T ss_pred EEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhCCC--C
Confidence 9998654 34666788999999999999999999998888888777778888999999999999999999999875 3
Q ss_pred hHHHHHHHHhcCccEEEEEecCCceEEEecCcee-eecCc---cccccCCCCcchHHHHHHHHHHHcCCCccccccc
Q 044512 156 KDDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKG-RVPGF---SVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKFR 228 (230)
Q Consensus 156 ~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~-~~~~~---~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 228 (230)
.+++++.|.+.|++.||||+|++|+++++++..+ +++++ +++++||+||||+|+|||+++|++|+++++|.++
T Consensus 212 ~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~ 288 (319)
T 3lhx_A 212 VEDVIARTHNAGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAENAAKR 288 (319)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHHHHHcCCCHHHHHHH
Confidence 4568888999999999999999999999887655 88875 6689999999999999999999999999998753
No 8
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=1.5e-39 Score=262.70 Aligned_cols=222 Identities=28% Similarity=0.509 Sum_probs=187.1
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEEc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHYG 80 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 80 (230)
++||+|.+|+.+++.|+++||+++++.+.++.+|+.+++..+ +|++++..++ +++..+.++++....+++++++|++
T Consensus 75 g~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~-~g~~~~~~~~--~a~~~~~~~~~~~~~~~~~~~v~~~ 151 (327)
T 3hj6_A 75 SRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKS-TRTPDWLPYR--EADMYLQEDDIIFELIKRSKVFHLS 151 (327)
T ss_dssp CEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCC-TTCCCEEEEC--SGGGGCCSCCCHHHHHC--CEEEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEec-CCCccEEEec--ChhhhCChhhcCHhHhccCCEEEEC
Confidence 579999999999999999999999998778889999888765 5888877764 4666677666666678899999999
Q ss_pred cccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHHHH
Q 044512 81 SISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDDVV 160 (230)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~ 160 (230)
++.+..+.+.+.+.++++.+++.+.++++||+++..+|.......+.+.++++++|++++|++|+..|+|.... ++++
T Consensus 152 g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~--~~~~ 229 (327)
T 3hj6_A 152 TFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSP--ENYV 229 (327)
T ss_dssp SHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTTSCS--SGGG
T ss_pred chHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCH--HHHH
Confidence 98776677788999999999999999999999887777654455678889999999999999999999987433 3467
Q ss_pred HHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 161 MSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 161 ~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
+.|++.|++.||||+|++|+++++++..+++++++++++||+||||+|+|||++++++|+++++|.+
T Consensus 230 ~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~ 296 (327)
T 3hj6_A 230 KRYLELGVKAVILTLGEEGVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYTVKRSIK 296 (327)
T ss_dssp GGGTTTTCSEEEEECSTTCEEEECSSCEEESCSSTTC-----CCHHHHHHHHHHTTSSCSTTHHHHH
T ss_pred HHHHhCCCCEEEEEECCCceEEEeCCeeEEcCCcccccCCCcChhHHHHHHHHHHHHcCCCHHHHHH
Confidence 7888899999999999999999998889999999999999999999999999999999999999875
No 9
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=1.1e-37 Score=250.00 Aligned_cols=217 Identities=24% Similarity=0.318 Sum_probs=187.7
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEEc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHYG 80 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 80 (230)
++||+|.+|+.+++.|+++||+++++...++ +|+.+++.++++|++++.+++...+...++++++....+++++++|++
T Consensus 54 ~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~ 132 (309)
T 1v1a_A 54 GRVGEDELGAMVEERLRAEGVDLTHFRRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLS 132 (309)
T ss_dssp EEECSSHHHHHHHHHHHHHTCBCTTEEECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEEEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCCCceEEEcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCChhHhcCCCEEEEe
Confidence 4689999999999999999999999988778 999999998888888877766556666777777766778899999999
Q ss_pred ccccc-CchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHHH
Q 044512 81 SISLI-SEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDDV 159 (230)
Q Consensus 81 ~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~ 159 (230)
++... .+.+.+.+.++++.+++.+.++++||+.+..+|+ .+...+.+.++++++|++++|+.|+..|+|.. +++
T Consensus 133 g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~----~~~ 207 (309)
T 1v1a_A 133 GITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWS-PEEARGFLERALPGVDLLFLSEEEAELLFGRV----EEA 207 (309)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTSC-HHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH----HHH
T ss_pred CchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCcccCC-HHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH----HHH
Confidence 97653 5667788899999999999999999998877774 55566778899999999999999999998865 334
Q ss_pred HHHHHhcCccEEEEEecCCceEEEec-CceeeecCccccccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 160 VMSLWHDNLKLLLVTYGAKGCGYFTK-KFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 160 ~~~l~~~g~~~vvvt~g~~g~~~~~~-~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
++ +.|++.||||+|++|+++ .+ +..+++++++++++||+||||+|+|||+++|++|+++++|.+
T Consensus 208 ~~---~~g~~~vvvt~G~~G~~~-~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~ 272 (309)
T 1v1a_A 208 LR---ALSAPEVVLKRGAKGAWA-FVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLPVEERLR 272 (309)
T ss_dssp HH---HTCCSEEEEECGGGCEEE-EETTEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HH---hcCCCEEEEEecCCCeeE-ecCCcEEEeCCCCCCcCCCCCchHHHHHHHHHHHHcCCCHHHHHH
Confidence 44 679999999999999998 66 677889999999999999999999999999999999999865
No 10
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=100.00 E-value=4.1e-38 Score=252.95 Aligned_cols=221 Identities=26% Similarity=0.423 Sum_probs=189.1
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEE--EecCCeeeEEEecCCCccccccccccCccccccccEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVT--LKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFH 78 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 78 (230)
++||+|.+|+.+++.|+++||+++++...++.+|+.+++. ++++|++++.+++...+...++++++....+++++++|
T Consensus 54 ~~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~ 133 (313)
T 2v78_A 54 ARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRNSRLVH 133 (313)
T ss_dssp EEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCHHHHHTSSEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCHHHhcCCCEEE
Confidence 4689999999999999999999999988777799999998 88788888877765566667777777666778999999
Q ss_pred Ecccccc-CchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCc--EEeeCHHHHhhhcCCCCcc
Q 044512 79 YGSISLI-SEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHAD--LIKVSDDEVNFLTKGGDAE 155 (230)
Q Consensus 79 ~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~d--il~~n~~E~~~l~~~~~~~ 155 (230)
++++.+. .+.+.+.+.++++.+++. ++||+.+..+|+++....+.+.++++++| ++++|++|++.|+|.. +
T Consensus 134 ~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g~~--~ 207 (313)
T 2v78_A 134 STGITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDVT--D 207 (313)
T ss_dssp EEHHHHHHCHHHHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHSCC--C
T ss_pred EcCchhhcChHHHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhCCC--C
Confidence 9987542 455667777777766543 89999887778766666778889999999 9999999999999874 3
Q ss_pred hHHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 156 KDDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 156 ~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
.+++++.|.+.|++.||||+|++|+++++++..+++++++++++||+||||+|+|||+++|++|+++++|.+
T Consensus 208 ~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~ 279 (313)
T 2v78_A 208 PDEAYRKYKELGVKVLLYKLGSKGAIAYKDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSLYLQGKDIEYSLA 279 (313)
T ss_dssp HHHHHHHHHHTTEEEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEECCCCcEEeeCCcEEEeCCCcCCccCCCCchHHHHHHHHHHHHcCCCHHHHHH
Confidence 456788888899999999999999999988888899999999999999999999999999999999999875
No 11
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=100.00 E-value=8.4e-39 Score=259.47 Aligned_cols=223 Identities=28% Similarity=0.424 Sum_probs=185.8
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEEc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHYG 80 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 80 (230)
++||+|.+|+.+++.|++.||+++++.+.++.+|+.+++.++++|++++.+++..+++..+.++ ....+++++++|++
T Consensus 71 g~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~--~~~~l~~~~~v~~~ 148 (339)
T 1tyy_A 71 GCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQ--DLPPFRQYEWFYFS 148 (339)
T ss_dssp EEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGG--GCCCCCTTCEEEEE
T ss_pred EeeCCCHHHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcc--hhhHhccCCEEEEc
Confidence 4689999999999999999999999988777899999998888898888776555666656544 23467889999999
Q ss_pred cccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHHHH
Q 044512 81 SISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDDVV 160 (230)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~ 160 (230)
++.+..+.+.+.+.++++.+++.+.++++||+.+..+|+..+...+.+.++++++|++++|++|+..|+|.... ++++
T Consensus 149 ~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~--~~~~ 226 (339)
T 1tyy_A 149 SIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHW--QDAR 226 (339)
T ss_dssp HHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCCSSG--GGGS
T ss_pred chhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCH--HHHH
Confidence 87667777788899999999999999999999887778655556777888999999999999999999987643 3466
Q ss_pred HHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcC-----CCcccccc
Q 044512 161 MSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKD-----ANIFNVKF 227 (230)
Q Consensus 161 ~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g-----~~~~~a~~ 227 (230)
+.|.+.|++.||||+|++|+++++++..+++++++++++||+||||+|+|||+++|++| +++++|.+
T Consensus 227 ~~l~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~~~l~~a~~ 298 (339)
T 1tyy_A 227 YYLRDLGCDTTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWDHALLAEAIS 298 (339)
T ss_dssp STTGGGTCSCEEEECGGGCEEEESSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHTTSSSCCHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEECCCceEEEeCCceEEcCCCCCCcCCCCCchHHHHHHHHHHHHhccccccccHHHHHH
Confidence 77778899999999999999999888888999999999999999999999999999997 88888765
No 12
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=100.00 E-value=1.2e-37 Score=253.55 Aligned_cols=227 Identities=16% Similarity=0.152 Sum_probs=191.3
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEe--cCCCccccccccccC-ccccccccEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFY--RNPSADMLLKDSELN-MGLIKQAKIF 77 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~--~~~~~~~~~~~~~~~-~~~l~~~~~v 77 (230)
++||+|.+|+.+++.|++.||+++++... +.+|+.+++..+++++++++.+ +..++...+.+++++ ...+++++++
T Consensus 55 ~~vG~D~~g~~i~~~l~~~gv~~~~v~~~-~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~v 133 (346)
T 3ktn_A 55 TKLPANRLGEAGKAALRKLGISDQWVGEK-GDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVDMV 133 (346)
T ss_dssp EEECSSHHHHHHHHHHHHTTCBCTTEEEC-CSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCHHHHHTTCSEE
T ss_pred EecCCCHHHHHHHHHHHHcCCcceEEEeC-CCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcChHHHhCCCCEE
Confidence 46899999999999999999999999865 5699999998877667665554 445566667777776 4568899999
Q ss_pred EEccccc-cCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCH--HHHHHHHHHHhhhCcEEeeCHHHHhhhcCCC-C
Q 044512 78 HYGSISL-ISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQ--DAARDGIKSIWNHADLIKVSDDEVNFLTKGG-D 153 (230)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~-~ 153 (230)
|++++.+ ..+.+.+.+.++++.+++.|.++++||+.+..+|... ....+.+.++++++|++++|+.|+..|+|.. .
T Consensus 134 ~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~ 213 (346)
T 3ktn_A 134 HICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPR 213 (346)
T ss_dssp EECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCCC
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCCC
Confidence 9999754 3555668889999999999999999999888888732 5567888999999999999999999999977 3
Q ss_pred c------chHHHHHHHHh-cCccEEEEEecCCc-------eEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcC
Q 044512 154 A------EKDDVVMSLWH-DNLKLLLVTYGAKG-------CGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKD 219 (230)
Q Consensus 154 ~------~~~~~~~~l~~-~g~~~vvvt~g~~g-------~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g 219 (230)
. +..++++.|.+ .|++.||||+|++| +++++++..+++++++++++||+||||+|+|||+++|++|
T Consensus 214 ~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g 293 (346)
T 3ktn_A 214 EDLEGEAQETELIQRFMSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQN 293 (346)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEECCCSCCTTHHHHHHHHHHHHHHTT
T ss_pred ccccchHHHHHHHHHHHHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCccccCCCCchhHHHHHHHHHHHHcC
Confidence 2 23456677776 49999999999998 8888888889999999999999999999999999999999
Q ss_pred CCccccccc
Q 044512 220 ANIFNVKFR 228 (230)
Q Consensus 220 ~~~~~a~~~ 228 (230)
+++++|.++
T Consensus 294 ~~l~~a~~~ 302 (346)
T 3ktn_A 294 WSLEKAVTF 302 (346)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 999998753
No 13
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=1.5e-37 Score=253.15 Aligned_cols=218 Identities=17% Similarity=0.247 Sum_probs=188.9
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEEc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHYG 80 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 80 (230)
++||+|.+|+.+++.|++.||+++++....+.+|+.++++++++|+|++..+ .++...++++++....+++++++|++
T Consensus 101 g~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~--~ga~~~l~~~~~~~~~~~~~~~v~~~ 178 (352)
T 4e3a_A 101 GNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTY--LGACVELGPEDVEADVVADAKVTYFE 178 (352)
T ss_dssp CCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEE--CGGGGGCCGGGCCHHHHHTEEEEEEE
T ss_pred EEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEec--cChhhcCChhhCCHHHHhhCCEEEEe
Confidence 5899999999999999999999999887777789999999998999998876 45666777888877788999999999
Q ss_pred cccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCcEEeeCHHHHhhhcCCCCcchHH
Q 044512 81 SISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWN--HADLIKVSDDEVNFLTKGGDAEKDD 158 (230)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~l~~~~~~~~~~ 158 (230)
|+.+..+.+.+.+.++++.+++.|.++++||+... ......+.+.++++ ++|++++|+.|+..|+|... .++
T Consensus 179 G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g~~~--~~~ 252 (352)
T 4e3a_A 179 GYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSF----CVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQTDD--FEE 252 (352)
T ss_dssp GGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHH----HHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTTCSC--HHH
T ss_pred eeecCCchHHHHHHHHHHHHHHcCCEEEEECCchh----hHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhCCCC--HHH
Confidence 98766777889999999999999999999997310 02334667888998 89999999999999998753 345
Q ss_pred HHHHHHhcCccEEEEEecCCceEEEecCceeeecCcccc-ccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 159 VVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVK-TIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 159 ~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~-~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
+++.|.. +++.||||+|++|++++++++.+++++++++ ++||+||||+|+|||++++++|+++++|.+
T Consensus 253 a~~~l~~-~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l~~g~~l~~a~~ 321 (352)
T 4e3a_A 253 ALNRIAA-DCKIAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRSLEDCGK 321 (352)
T ss_dssp HHHHHHH-HSSEEEEECGGGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHhc-CCCEEEEEECCCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHHHcCCCHHHHHH
Confidence 6777665 6889999999999999999999999999986 899999999999999999999999999865
No 14
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=100.00 E-value=2.2e-37 Score=248.51 Aligned_cols=219 Identities=26% Similarity=0.407 Sum_probs=187.6
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCe--eeEEEecCCCccccccccccCccccccccEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGE--REFMFYRNPSADMLLKDSELNMGLIKQAKIFH 78 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 78 (230)
++||+|.+|+.+++.|+++||+++++...++.+|+.+++.++++|+ +++.+++..++...++++++....+++++++|
T Consensus 54 ~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~ 133 (311)
T 2dcn_A 54 AKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKSADLVH 133 (311)
T ss_dssp CEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTTCSEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcChHHHcCCCEEE
Confidence 5799999999999999999999999988777799999999888887 77777655566667777777666788999999
Q ss_pred Eccccc-cCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCcEEeeCHHHHhhhcCCCCcc
Q 044512 79 YGSISL-ISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWN--HADLIKVSDDEVNFLTKGGDAE 155 (230)
Q Consensus 79 ~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~l~~~~~~~ 155 (230)
++++.+ ..+.+.+.+.++++.+++. ++||+.+..+|+ ++...+.+.++++ ++|++++|++|+..|+|.. +
T Consensus 134 ~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~-~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~~--~ 206 (311)
T 2dcn_A 134 SSGITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKLWS-AEEAKREILKLLSKFHLKFLITDTDDSKIILGES--D 206 (311)
T ss_dssp EEHHHHHSCHHHHHHHHHHHHHCSSE----EEECCCCTTTSC-HHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSCC--C
T ss_pred EeCcccccChHHHHHHHHHHHHHHHh----CcCccCchhhCC-hHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCCC--C
Confidence 998755 2566677778888776654 899998888886 5556677888999 9999999999999999874 3
Q ss_pred hHHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 156 KDDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 156 ~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
.+++++.|.+. ++.||||+|++|+++++++..+++++++++++||+||||+|+|||++++++|+++++|.+
T Consensus 207 ~~~~~~~l~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~ 277 (311)
T 2dcn_A 207 PDKAAKAFSDY-AEIIVMKLGPKGAIVYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFEMEKALD 277 (311)
T ss_dssp HHHHHHHHTTT-EEEEEEEEETTEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHHHHHHHh-CCEEEEEECCCCcEEEeCCcEEEeCCccccccCCCCchHHHHHHHHHHHHcCCCHHHHHH
Confidence 45678888888 999999999999999988888899999999999999999999999999999999999865
No 15
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=100.00 E-value=8.4e-37 Score=246.48 Aligned_cols=220 Identities=20% Similarity=0.270 Sum_probs=185.7
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEEc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHYG 80 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 80 (230)
++||+|.+|+.+++.|++.||+++++...++.+|+.++++++++|++++..++ ..+...++.++++...+.+++++|++
T Consensus 64 g~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (325)
T 3h49_A 64 SRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNR-NGSLWKLNIDDVDFARFSQAKLLSLA 142 (325)
T ss_dssp CEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCT-TSHHHHCCGGGCCGGGGGGCSEEEEE
T ss_pred EEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEecc-CcccccCChhhcChhhhccCCEEEEe
Confidence 57999999999999999999999999888778999999999989999887653 23444566677766778999999999
Q ss_pred cccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHHHH
Q 044512 81 SISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDDVV 160 (230)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~ 160 (230)
++......+.+.+.++++.+++.+ .+++|+..+...|.. .+.+.++++++|++++|+.|+..|+|... .++++
T Consensus 143 g~~~~~~~~~~~~~~~~~~a~~~~-~~~~d~~~~~~~~~~----~~~~~~~l~~~dil~~N~~E~~~l~g~~~--~~~~~ 215 (325)
T 3h49_A 143 SIFNSPLLDGKALTEIFTQAKARQ-MIICADMIKPRLNET----LDDICEALSYVDYLFPNFAEAKLLTGKET--LDEIA 215 (325)
T ss_dssp EETTSTTSCHHHHHHHHHHHHHTT-CEEEEEECCCSSCCC----HHHHHHHHTTCSEEECBHHHHHHHHTCSS--HHHHH
T ss_pred cccCCcccCHHHHHHHHHHHHhcC-CEEEecCCchhhhhH----HHHHHHHHhhCCEEecCHHHHHHHhCCCC--HHHHH
Confidence 975443345578889999999988 577777666665642 35577889999999999999999998764 35678
Q ss_pred HHHHhcCccEEEEEecCCceEEEecCceeeecCccc-cccCCCCcchHHHHHHHHHHHcCCCccccccc
Q 044512 161 MSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSV-KTIDTTGAGDAFVGSFLVSVAKDANIFNVKFR 228 (230)
Q Consensus 161 ~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~-~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 228 (230)
+.|.+.|++.||||+|++|+++++++..++++++++ +++||+||||+|+|||+++|++|+++++|.++
T Consensus 216 ~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~ 284 (325)
T 3h49_A 216 DCFLACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARF 284 (325)
T ss_dssp HHHHTTTCSEEEEECTTSCEEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHcCCCEEEEEeCCCCeEEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 888899999999999999999999888889998886 89999999999999999999999999998753
No 16
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=100.00 E-value=9.5e-37 Score=249.73 Aligned_cols=217 Identities=17% Similarity=0.203 Sum_probs=178.1
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCc----cccccccE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNM----GLIKQAKI 76 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~ 76 (230)
++||+|.+|+.+++.|++.||+++++.. .+.+|+.++++++ +++++++.+ .++...++++++.. ..++++++
T Consensus 104 g~vG~D~~g~~~~~~l~~~GV~~~~~~~-~~~~Tg~~~i~~~-~~~r~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~~~ 179 (365)
T 3loo_A 104 GCVGQDEYARILEERATSNGVNVQYQRS-ATSPTGTCAVLVT-GTQRSLCAN--LAAANDFTPEHLRSDGNRAYLQGAQF 179 (365)
T ss_dssp EEEESBHHHHHHHHHHHHHTCEEEEEEE-SSSCCEEEEEEEE-TTEEEEEEE--CGGGGGCCGGGGGSHHHHHHHHHCSE
T ss_pred EEecCCchHHHHHHHHHHCCCceecccc-CCCCCeEEEEEEE-CCceEEEec--cchHhhCCHhHcCchhhHHHHhhCCE
Confidence 3689999999999999999999999886 6679999999998 788888766 45666677666653 46789999
Q ss_pred EEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCC---C
Q 044512 77 FHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGG---D 153 (230)
Q Consensus 77 v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~---~ 153 (230)
+|++|+.+. .+.+.+.++++.+++.|.++++|++.. .| .....+.+.++++++|++++|+.|++.|++.. .
T Consensus 180 v~i~G~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~~~ 253 (365)
T 3loo_A 180 FYVSGFFFT--VSFESALSVAKEAAATGRMFMMNLSAP--FV--PQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGT 253 (365)
T ss_dssp EEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCST--HH--HHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCC
T ss_pred EEEeeeecc--CCHHHHHHHHHHHHHcCCEEEEECCch--hh--hHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCCCC
Confidence 999997543 466788999999999999999999632 11 23346778899999999999999999998753 3
Q ss_pred cchHHHHHHHHhc------CccEEEEEecCCceEEE--ecCceeeecCccc---cccCCCCcchHHHHHHHHHHHcCCCc
Q 044512 154 AEKDDVVMSLWHD------NLKLLLVTYGAKGCGYF--TKKFKGRVPGFSV---KTIDTTGAGDAFVGSFLVSVAKDANI 222 (230)
Q Consensus 154 ~~~~~~~~~l~~~------g~~~vvvt~g~~g~~~~--~~~~~~~~~~~~~---~~~dt~GaGDaf~ag~~~~l~~g~~~ 222 (230)
.+.+++++.|.+. +++.||||+|++|++++ .+++.++++++++ +++|||||||+|+|||+++|++|+++
T Consensus 254 ~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~l 333 (365)
T 3loo_A 254 EDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRTV 333 (365)
T ss_dssp CCHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHHTTCCH
T ss_pred CCHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHHCCCCH
Confidence 3456678888764 88999999999999999 7778889999887 89999999999999999999999999
Q ss_pred ccccc
Q 044512 223 FNVKF 227 (230)
Q Consensus 223 ~~a~~ 227 (230)
++|.+
T Consensus 334 ~~a~~ 338 (365)
T 3loo_A 334 DVCIK 338 (365)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
No 17
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=100.00 E-value=6.7e-37 Score=250.96 Aligned_cols=219 Identities=15% Similarity=0.173 Sum_probs=183.3
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCc----cccccccE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNM----GLIKQAKI 76 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~ 76 (230)
++||+|.+|+.+++.|++.||+++++....+.+|+.++++++ +|+++++.+ .+++..++++++.. ..++++++
T Consensus 105 g~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~--~ga~~~l~~~~~~~~~~~~~~~~~~~ 181 (370)
T 3vas_A 105 GCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--LGAACDLSLAHIEQPHVWSLVEKAQV 181 (370)
T ss_dssp EEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--EEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEc--cchhhhCCHHHcCchhhHHHHhhCCE
Confidence 468999999999999999999999997656679999999998 799988876 45666677666653 46789999
Q ss_pred EEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCC---
Q 044512 77 FHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGD--- 153 (230)
Q Consensus 77 v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~--- 153 (230)
+|++|+.+. .+.+.+.++++.+++.|.++++|++.. .| .....+.+.++++++|++++|+.|+..|++...
T Consensus 182 v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~ld~~~~--~~--~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~~~~~~ 255 (370)
T 3vas_A 182 YYIAGFVIN--TCYEGMLKIAKHSLENEKLFCFNLSAP--FL--SQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLE 255 (370)
T ss_dssp EEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCCH--HH--HHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCS
T ss_pred EEEEeeecc--CCHHHHHHHHHHHHHcCCEEEEECCcH--HH--HHHHHHHHHHHHhhCCEEEcCHHHHHHHhcccCCCc
Confidence 999997443 567889999999999999999999731 11 122356788999999999999999999987632
Q ss_pred cchHHHHHHHHhc-------CccEEEEEecCCceEEEe--cCceeeecCccc---cccCCCCcchHHHHHHHHHHHcCCC
Q 044512 154 AEKDDVVMSLWHD-------NLKLLLVTYGAKGCGYFT--KKFKGRVPGFSV---KTIDTTGAGDAFVGSFLVSVAKDAN 221 (230)
Q Consensus 154 ~~~~~~~~~l~~~-------g~~~vvvt~g~~g~~~~~--~~~~~~~~~~~~---~~~dt~GaGDaf~ag~~~~l~~g~~ 221 (230)
.+.+++++.|.+. +++.||||+|++|+++++ ++..++++++++ +++||+||||+|+|||+++|++|++
T Consensus 256 ~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~~g~~ 335 (370)
T 3vas_A 256 DTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKP 335 (370)
T ss_dssp SHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHHHHHHCCCC
Confidence 3445677888774 899999999999999998 788889999887 8999999999999999999999999
Q ss_pred ccccccc
Q 044512 222 IFNVKFR 228 (230)
Q Consensus 222 ~~~a~~~ 228 (230)
+++|.++
T Consensus 336 l~~a~~~ 342 (370)
T 3vas_A 336 MITSLHA 342 (370)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998753
No 18
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=100.00 E-value=2.2e-36 Score=246.08 Aligned_cols=217 Identities=17% Similarity=0.203 Sum_probs=180.5
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCc----cccccccE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNM----GLIKQAKI 76 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~ 76 (230)
++||+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|+|+++.+ .++...++++++.. ..++++++
T Consensus 90 g~vG~D~~g~~~~~~l~~~GV~~~~~~-~~~~~T~~~~i~~~-~g~r~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~~~ 165 (347)
T 3otx_A 90 GCIADDRYGKVLKEAAEHEGIVMAVEH-TTKAGSGACAVCIT-GKERTLVAD--LGAANHLSSEHMRSPAVVRAMDESRI 165 (347)
T ss_dssp CEECSSHHHHHHHHHHHHHTCEECCEE-CSSSCEEEEEEEEE-TTEEEEEEE--EEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEecCChHHHHHHHHHHHCCCceeccc-CCCCCCeEEEEEEE-CCceeeeec--hhhhhcCCHHHcCchhhHHHHhhCCE
Confidence 579999999999999999999999985 56678999999998 899988765 45555666666653 56789999
Q ss_pred EEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCC---CC
Q 044512 77 FHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKG---GD 153 (230)
Q Consensus 77 v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~---~~ 153 (230)
+|++|+.+. .+.+.+.++++.+++++.++++|++.. .| .....+.+.++++++|++++|++|++.|++. ..
T Consensus 166 ~~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~~~~~ 239 (347)
T 3otx_A 166 FYFSGFTLT--VDVNHVLQACRKAREVDGLFMINLSAP--FI--MQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDT 239 (347)
T ss_dssp EEEEGGGGG--TCHHHHHHHHHHHHHTTCEEEEECCCH--HH--HHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHHTCCC
T ss_pred EEEeeeecc--cCHHHHHHHHHHHHHhCCEEEeeCchh--hh--HHHHHHHHHHHHhhCCEEecCHHHHHHHhcccCCCc
Confidence 999997543 456888999999999999999999731 11 1223577889999999999999999999864 22
Q ss_pred cchHHHHHHHH------hcCccEEEEEecCCceEEEecCceeeecCccc---cccCCCCcchHHHHHHHHHHHcCCCccc
Q 044512 154 AEKDDVVMSLW------HDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSV---KTIDTTGAGDAFVGSFLVSVAKDANIFN 224 (230)
Q Consensus 154 ~~~~~~~~~l~------~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~---~~~dt~GaGDaf~ag~~~~l~~g~~~~~ 224 (230)
.+.+++++.|. ..+++.||||+|++|++++++++.++++++++ +++|||||||+|+|||+++|++|+++++
T Consensus 240 ~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~ 319 (347)
T 3otx_A 240 DCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGKDLRR 319 (347)
T ss_dssp CCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTTTCCHHH
T ss_pred CCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHH
Confidence 34566777877 47899999999999999999888888998876 7999999999999999999999999999
Q ss_pred ccc
Q 044512 225 VKF 227 (230)
Q Consensus 225 a~~ 227 (230)
|.+
T Consensus 320 a~~ 322 (347)
T 3otx_A 320 CCE 322 (347)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 19
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=8.9e-36 Score=241.94 Aligned_cols=208 Identities=21% Similarity=0.212 Sum_probs=177.7
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEEc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHYG 80 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 80 (230)
++||+|.+|+.+++.|++.||+++++...++.+|+.++++++++|+++++.++ +++..++++++....+.+++++|++
T Consensus 87 ~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~--~~~~~~~~~~l~~~~l~~~~~v~~~ 164 (343)
T 2rbc_A 87 GAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFY--DHRLHEKKRACTPEDIALFDAVLVD 164 (343)
T ss_dssp CEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEEC--CGGGGSSCCCCCHHHHTTCSEEEEC
T ss_pred EEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcC--CCcccCChhHhcHhhhCCCCEEEEc
Confidence 57999999999999999999999999887777899999999888999887663 3444555566655567899999998
Q ss_pred cccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHH-HhhhCcEEeeCHHHHhhhcCCCCcchHHH
Q 044512 81 SISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKS-IWNHADLIKVSDDEVNFLTKGGDAEKDDV 159 (230)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~dil~~n~~E~~~l~~~~~~~~~~~ 159 (230)
+.. .+.+.++++.+++.+.++++||... .+.+.+ +++++|++++|++|+..|+|.. +..++
T Consensus 165 ~~~------~~~~~~~~~~a~~~g~~v~~Dp~~~----------~~~~~~~ll~~~dil~~N~~Ea~~l~g~~--~~~~~ 226 (343)
T 2rbc_A 165 VRW------PELALDVLTVARALGKPAILDGDVA----------PVETLEGLAPAATHIVFSEPAATRLTGLE--TVKDM 226 (343)
T ss_dssp SSS------HHHHHHHHHHHHHTTCCEEEEECSC----------CHHHHHHHGGGCSEEEEEHHHHHHHHCCS--SHHHH
T ss_pred CCC------HHHHHHHHHHHHHCCCEEEEECCcc----------ccccHHHHHhcCCEEEeCHHHHHHHcCCC--CHHHH
Confidence 752 2567888889999999999999742 245666 8999999999999999999875 34567
Q ss_pred HHHHHhcCc-cEEEEEecCCceEEEecC--ceeeecCccccccCCCCcchHHHHHHHHHHHcCCCccccccc
Q 044512 160 VMSLWHDNL-KLLLVTYGAKGCGYFTKK--FKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKFR 228 (230)
Q Consensus 160 ~~~l~~~g~-~~vvvt~g~~g~~~~~~~--~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 228 (230)
++.|.+.|+ +.||||+|++|+++++++ ..+++++++++++||+||||+|+|||+++|++|+++++|.++
T Consensus 227 ~~~l~~~g~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~~ 298 (343)
T 2rbc_A 227 LPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRL 298 (343)
T ss_dssp HHHHHHHSTTSEEEEECGGGCEEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHhCCCceEEEEECCcceEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 888888999 999999999999999887 788999999999999999999999999999999999998753
No 20
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=3.4e-36 Score=239.95 Aligned_cols=219 Identities=21% Similarity=0.302 Sum_probs=174.2
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEEc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHYG 80 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 80 (230)
++||+|.+|+.+++.|+++|| +++...++.+|+.+++.++++|++++.++.. .....+...+...+.+++++++|++
T Consensus 45 ~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~v~~g 121 (296)
T 2qhp_A 45 SAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEG-VAWDNIPFTDELKRLALNTRAVCFG 121 (296)
T ss_dssp EEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSS-CGGGCCCCCHHHHHHHHTEEEEEEC
T ss_pred EEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecC-ChhhhCCcchhhHhhhcCCCEEEEC
Confidence 468999999999999999999 7777766779999999888788888776532 2222333222224567889999999
Q ss_pred cccccCchHHHHHHHHHHHHHH-CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCC---Ccch
Q 044512 81 SISLISEPCRSAHMAALKAAKD-AGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGG---DAEK 156 (230)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~---~~~~ 156 (230)
++....+.+.+.+.++++.+++ .+.++++||+.+...|. .+.+.++++++|++++|+.|++.|+|.. ..+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~ 196 (296)
T 2qhp_A 122 SLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFYT-----KEVLRESFKRCNILKINDEELVTISRMFGYPGIDL 196 (296)
T ss_dssp SGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTTCCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCH
T ss_pred ChHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCccccC-----HHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCH
Confidence 8655566677888888888876 68999999988776664 3566788999999999999999998743 2344
Q ss_pred HHHHHHHHhc-CccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 157 DDVVMSLWHD-NLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 157 ~~~~~~l~~~-g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
+++++.+.+. |++.||||+|++|+++++++..+++++++++++||+||||+|+|||++++++|+++++|.+
T Consensus 197 ~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~l~~g~~~~~a~~ 268 (296)
T 2qhp_A 197 QDKCWILLAKYNLKMLILTCGINGSYVFTPGVVSFQETPKVPVADTVGAGDSFTAAFCASILNGKSVPEAHK 268 (296)
T ss_dssp HHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCccccCCCchHHHHHHHHHHHHcCCCHHHHHH
Confidence 5677888774 9999999999999999988888899999999999999999999999999999999999875
No 21
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=8.4e-36 Score=238.52 Aligned_cols=210 Identities=23% Similarity=0.321 Sum_probs=180.6
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCc--cccccccEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNM--GLIKQAKIFH 78 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~v~ 78 (230)
++||+|.+|+.+++.|+++||+++++.+.++.+|+.+++.++++|++++..+ .+++..+++++++. +.++++++++
T Consensus 61 ~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~v~ 138 (304)
T 3ry7_A 61 TKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVY--GGANMTMTPEDVINAKDAIINADFVV 138 (304)
T ss_dssp CEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEE--CGGGGGCCHHHHHTTHHHHHTCSEEE
T ss_pred EEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEe--cCchhcCCHHHHHHHHHHhccCCEEE
Confidence 5799999999999999999999999988788899999999998899988776 45556666665542 4578999998
Q ss_pred EccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcc---
Q 044512 79 YGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAE--- 155 (230)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~--- 155 (230)
+++ +.+.+.+.++++.+++.+.++++||++... .+.++++++|++++|+.|+..|+|....+
T Consensus 139 ~~~-----~~~~~~~~~~~~~a~~~~~~v~~D~~~~~~----------~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~ 203 (304)
T 3ry7_A 139 AQL-----EVPIPAIISAFEIAKAHGVTTVLNPAPAKA----------LPNELLSLIDIIVPNETEAELLSGIKVTNEQS 203 (304)
T ss_dssp EET-----TSCHHHHHHHHHHHHHTTCEEEEECCSCCC----------CCHHHHTTCSEECCBHHHHHHHHSCCCCSHHH
T ss_pred EcC-----CCCHHHHHHHHHHHHHcCCEEEEeCCcccc----------ccHHHHHhCCEEecCHHHHHHHhCCCCCChhH
Confidence 865 345678899999999999999999986422 23568899999999999999999987543
Q ss_pred hHHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcC-CCcccccc
Q 044512 156 KDDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKD-ANIFNVKF 227 (230)
Q Consensus 156 ~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g-~~~~~a~~ 227 (230)
..++++.|++.|++.|+||+|++|+++++++..+++++++++++||+||||+|+|||+++|++| +++++|.+
T Consensus 204 ~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~~~~a~~ 276 (304)
T 3ry7_A 204 MKDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDNLADAID 276 (304)
T ss_dssp HHHHHHHHHHTTCCEEEEECGGGCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHHCCTTCTTHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCceEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHHHHcCCCCHHHHHH
Confidence 3456788888999999999999999999988999999999999999999999999999999999 99999865
No 22
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=100.00 E-value=1.4e-35 Score=238.11 Aligned_cols=215 Identities=31% Similarity=0.565 Sum_probs=183.9
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEEc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHYG 80 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 80 (230)
++||+|.+|+.+++.|++.||+++++.+.++.+|+.+++.+++ |++++..+. ..+...+++++++...+++++++|++
T Consensus 54 g~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~-g~~~~~~~~-~~a~~~l~~~~~~~~~l~~~~~~~~~ 131 (313)
T 3ewm_A 54 SKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKG-ASPSFLLYD-DVAYFNMTLNDINWDIVEEAKIVNFG 131 (313)
T ss_dssp EEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSS-SSCEEEECC-SSGGGCCCGGGCCHHHHHHCSEEEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEecC-CCcceEeec-cCHHHhCChhhCCHHHhCCCCEEEEc
Confidence 4689999999999999999999999988888899999998765 888888763 33556677777777778899999999
Q ss_pred cccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCC-CHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHHH
Q 044512 81 SISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWP-SQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDDV 159 (230)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~ 159 (230)
++.+..+.+.+.+.++++.++ .+.++++||+.+..+|. ..+...+.+.++++++|++++|++|++.|.+....
T Consensus 132 g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~~----- 205 (313)
T 3ewm_A 132 SVILARNPSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGVE----- 205 (313)
T ss_dssp SGGGGSTTHHHHHHHHHHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTCC-----
T ss_pred CcccCCcchHHHHHHHHHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCcc-----
Confidence 987777778889999999887 47899999998877776 35556678889999999999999999998775432
Q ss_pred HHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHH--cCCCccccccc
Q 044512 160 VMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVA--KDANIFNVKFR 228 (230)
Q Consensus 160 ~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~--~g~~~~~a~~~ 228 (230)
..+...||||+|++|+++++++..+++++++++++||+||||+|+|||+++|+ +|+++++|.++
T Consensus 206 -----~~~~~~vviT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~l~~~~g~~l~~a~~~ 271 (313)
T 3ewm_A 206 -----VKGSMLTAITLGPKGCRLIKNETVVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKGLDLLKLGKF 271 (313)
T ss_dssp -----CCCSSEEEEECGGGEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHHSSSCCHHHHHHH
T ss_pred -----ccCceEEEEEECCCCeEEEECCeeEEcCCCCcccCCCCCchHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 13455689999999999999988899999999999999999999999999999 99999998753
No 23
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=7.4e-35 Score=237.45 Aligned_cols=225 Identities=18% Similarity=0.257 Sum_probs=181.1
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEE-ecCCCccccccccccCcc-ccccccEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMF-YRNPSADMLLKDSELNMG-LIKQAKIFH 78 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~-~l~~~~~v~ 78 (230)
++||+|.+|+.+++.|++.||+++++.. .+.+|+.+++..+.+++++++. .+...+...+.++++... .+++++++|
T Consensus 65 ~~vG~D~~G~~i~~~L~~~gv~~~~v~~-~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~ 143 (351)
T 2afb_A 65 TKLPNNPLGDAAAGHLRKFGVKTDYIAR-GGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWEKILDGARWFH 143 (351)
T ss_dssp EEECSSHHHHHHHHHHHHTTCBCTTEEE-CSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCCHHHHTTTEEEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCcceeEEE-CCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCCHHHhhcCCCEEE
Confidence 4799999999999999999999999986 4668999988776544444443 333334445555555532 468999999
Q ss_pred Eccccc-cCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCc---
Q 044512 79 YGSISL-ISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDA--- 154 (230)
Q Consensus 79 ~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~--- 154 (230)
++++.. ..+.+.+.+.++++.+++.+.++++||+.+..+|. .....+.+.++++++|++++|+.|+..|+|....
T Consensus 144 ~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~-~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~ 222 (351)
T 2afb_A 144 FSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWT-KEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLD 222 (351)
T ss_dssp EETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCC-HHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC-
T ss_pred EeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCC-hHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCccccc
Confidence 998754 24555688899999999999999999998877785 4456677889999999999999999999987642
Q ss_pred ------c---hHHHHHHHHhc-CccEEEEEecCCce--------EEEecCceeeecCccccccCCCCcchHHHHHHHHHH
Q 044512 155 ------E---KDDVVMSLWHD-NLKLLLVTYGAKGC--------GYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSV 216 (230)
Q Consensus 155 ------~---~~~~~~~l~~~-g~~~vvvt~g~~g~--------~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l 216 (230)
+ ..++++.|... |++.||||+|++|+ +++.++..+++++++++++||+||||+|+|||+++|
T Consensus 223 ~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l 302 (351)
T 2afb_A 223 LKTGKLNREAYAKIAEEVTRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDSFAGALIYGS 302 (351)
T ss_dssp ------CHHHHHHHHHHHHHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTHHHHHHHHHHHHH
T ss_pred ccccccchhhHHHHHHHHHHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCchHHHHHHHHHHH
Confidence 2 23566777764 99999999999975 667777788899999999999999999999999999
Q ss_pred HcCCCcccccc
Q 044512 217 AKDANIFNVKF 227 (230)
Q Consensus 217 ~~g~~~~~a~~ 227 (230)
++|+++++|.+
T Consensus 303 ~~g~~l~~a~~ 313 (351)
T 2afb_A 303 LMGFDSQKKAE 313 (351)
T ss_dssp HHTCCHHHHHH
T ss_pred HcCCCHHHHHH
Confidence 99999999865
No 24
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=3.1e-35 Score=235.77 Aligned_cols=210 Identities=21% Similarity=0.288 Sum_probs=176.8
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCc--cccccccEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNM--GLIKQAKIFH 78 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~v~ 78 (230)
++||+|.+|+.+++.|+++||+++++...++.+|+.+++.++++|++++..+ .+++..++++++.. ..++++++++
T Consensus 62 ~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~v~ 139 (309)
T 1rkd_A 62 ACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIH--AGANAALSPALVEAQRERIANASALL 139 (309)
T ss_dssp EEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEE--CGGGGGCCHHHHHTTHHHHHHCSEEE
T ss_pred EEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEe--CCchhcCCHHHHHHHHHhcccCCEEE
Confidence 4689999999999999999999999987777799999999988899988776 45555566655542 3567899998
Q ss_pred EccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcc---
Q 044512 79 YGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAE--- 155 (230)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~--- 155 (230)
+++. .+.+.+..+++.+++.+.++++||++... +. .++++++|++++|+.|+..|+|....+
T Consensus 140 ~~~~-----~~~~~~~~~~~~a~~~g~~v~~D~~~~~~-~~---------~~ll~~~dil~~N~~E~~~l~g~~~~~~~~ 204 (309)
T 1rkd_A 140 MQLE-----SPLESVMAAAKIAHQNKTIVALNPAPARE-LP---------DELLALVDIITPNETEAEKLTGIRVENDED 204 (309)
T ss_dssp ECSS-----SCHHHHHHHHHHHHHTTCEEEECCCSCCC-CC---------HHHHTTCSEECCCHHHHHHHHSCCCSSHHH
T ss_pred EeCC-----CCHHHHHHHHHHHHHcCCEEEEECCcccc-ch---------HHHHhhCCEEEcCHHHHHHHhCCCCCCHHH
Confidence 8653 24477888899999999999999987532 22 467899999999999999999976433
Q ss_pred hHHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 156 KDDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 156 ~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
..++++.|.+.|++.||||+|++|+++++++..+++++++++++||+||||+|+|||++++++|+++++|.+
T Consensus 205 ~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~ 276 (309)
T 1rkd_A 205 AAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIR 276 (309)
T ss_dssp HHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEECCCcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHHHcCCCHHHHHH
Confidence 345677888899999999999999999988888899999999999999999999999999999999999875
No 25
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=6.3e-35 Score=236.06 Aligned_cols=211 Identities=24% Similarity=0.386 Sum_probs=176.4
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCc--cccccccEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNM--GLIKQAKIFH 78 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~v~ 78 (230)
++||+|.+|+.+++.|++.||+++++...++.+|+.++++++++|++++..+ .+++..++++++.. +.++++++++
T Consensus 82 ~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~--~ga~~~l~~~~~~~~~~~l~~~~~v~ 159 (331)
T 2fv7_A 82 CKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIV--AGANLLLNTEDLRAAANVISRAKVMV 159 (331)
T ss_dssp EEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEE--CGGGGGCCHHHHHHTHHHHHHCSEEE
T ss_pred EEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEec--CCccccCCHHHHHHHHHhhccCCEEE
Confidence 4689999999999999999999999988777799999999988899988876 34555566655532 3467899998
Q ss_pred EccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcc---
Q 044512 79 YGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAE--- 155 (230)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~--- 155 (230)
+++. .+.+.+..+++.+++.+.++++||+++...+. .++++++|++++|+.|+..|+|....+
T Consensus 160 ~~~~-----~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~---------~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~ 225 (331)
T 2fv7_A 160 CQLE-----ITPATSLEALTMARRSGVKTLFNPAPAIADLD---------PQFYTLSDVFCCNESEAEILTGLTVGSAAD 225 (331)
T ss_dssp ECSS-----SCHHHHHHHHHHHHHTTCEEEECCCSCCTTCC---------THHHHTCSEEEEEHHHHHHHHSSCCCSHHH
T ss_pred EecC-----CCHHHHHHHHHHHHHcCCEEEEeCCcccccch---------HHHHhcCCEEEeCHHHHHHHhCCCCCChhH
Confidence 8753 23477788899999999999999987533232 367889999999999999999875432
Q ss_pred hHHHHHHHHhcCccEEEEEecCCceEEEecC--ceeeecCccccccCCCCcchHHHHHHHHHHHcC--CCcccccc
Q 044512 156 KDDVVMSLWHDNLKLLLVTYGAKGCGYFTKK--FKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKD--ANIFNVKF 227 (230)
Q Consensus 156 ~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~--~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g--~~~~~a~~ 227 (230)
..++++.|.+.|++.||||+|++|++++.++ ..+++++++++++||+||||+|+|||++++++| +++++|.+
T Consensus 226 ~~~~~~~l~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~~~a~~ 301 (331)
T 2fv7_A 226 AGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLN 301 (331)
T ss_dssp HHHHHHHHHTTTCSEEEEECGGGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTTSCHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEECCCceEEEECCCCceeEecCCCCccCCCCCchHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 3456778888999999999999999998877 788999999999999999999999999999999 99999865
No 26
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=8.2e-35 Score=237.19 Aligned_cols=226 Identities=16% Similarity=0.179 Sum_probs=175.8
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccC-ccccccccEEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELN-MGLIKQAKIFHY 79 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~v~~ 79 (230)
++||+|++|+.+++.|+++||+++++...++..|+.+++..+..+++.+.+++...+.......++. .+.+++++++|+
T Consensus 77 g~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~~~~~~~~~ 156 (351)
T 4gm6_A 77 TVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWDLSELLKGIRVLHV 156 (351)
T ss_dssp EEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCCHHHHHTTEEEEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccCHHHHHhhccccee
Confidence 4799999999999999999999999988777555555555555667777776555544444444544 356889999999
Q ss_pred ccccc-cCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHH
Q 044512 80 GSISL-ISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDD 158 (230)
Q Consensus 80 ~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~ 158 (230)
+++.+ ..+.+.+.+.++++.+++.|++++|||++++.+|. ++..++.+.++++++|++++|++|+..+++...... +
T Consensus 157 ~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~-~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~-~ 234 (351)
T 4gm6_A 157 SGITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWE-LEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSETT-D 234 (351)
T ss_dssp EHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSC-HHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTCS-C
T ss_pred cccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhh-hhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCchh-H
Confidence 99765 46667789999999999999999999999999996 677888899999999999999999999998665432 1
Q ss_pred HHHHHHh--------cCccEEEEEecC--CceEEEecCceeeecCccc-cccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 159 VVMSLWH--------DNLKLLLVTYGA--KGCGYFTKKFKGRVPGFSV-KTIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 159 ~~~~l~~--------~g~~~vvvt~g~--~g~~~~~~~~~~~~~~~~~-~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
.++.+.+ .+.+.++++.+. .+..++.++..++.++.++ +++|||||||+|+|||+++|++|+++++|.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~g~~~~~al~ 314 (351)
T 4gm6_A 235 YYQAMHDKYPNIELFYATKRTVISASHHLLQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAAVLHGILSEWRPDETVK 314 (351)
T ss_dssp HHHHHHHHCTTCCEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHhhhhhhhhhhccccceeeeccCCceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHHHHHHHHCCCCHHHHHH
Confidence 2222221 233344555443 3566777777777777665 7999999999999999999999999999875
Q ss_pred c
Q 044512 228 R 228 (230)
Q Consensus 228 ~ 228 (230)
+
T Consensus 315 ~ 315 (351)
T 4gm6_A 315 F 315 (351)
T ss_dssp H
T ss_pred H
Confidence 3
No 27
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=100.00 E-value=4.4e-35 Score=234.13 Aligned_cols=206 Identities=22% Similarity=0.292 Sum_probs=171.2
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEEc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHYG 80 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 80 (230)
++||+|.+|+.+++.|++.||+++++...++.+|+.+++.++++|++++..+. +++..++++++.. .+++++|++
T Consensus 63 ~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~---~~~~~v~~~ 137 (302)
T 2c4e_A 63 SCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLW--GAAKHYKELNPPN---FNTEIVHIA 137 (302)
T ss_dssp CEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEEC--GGGGGGGGCCCCC---CCEEEEEEC
T ss_pred EEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeC--ChhhhCCHhhcCc---ccCCEEEEe
Confidence 57999999999999999999999988877777899999999888998877763 4555566555543 678999987
Q ss_pred cccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHHHH
Q 044512 81 SISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDDVV 160 (230)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~ 160 (230)
+. .+ +.+.++++.+++.+ ++++||+.+...|. .+.+.++++++|++++|++|+..|+|....+..
T Consensus 138 ~~-----~~-~~~~~~~~~a~~~g-~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~--- 202 (302)
T 2c4e_A 138 TG-----DP-EFNLKCAKKAYGNN-LVSFDPGQDLPQYS-----KEMLLEIIEHTNFLFMNKHEFERASNLLNFEID--- 202 (302)
T ss_dssp SS-----CH-HHHHHHHHHHBTTB-EEEECCGGGGGGCC-----HHHHHHHHHTCSEEEEEHHHHHHHHHHHTCCHH---
T ss_pred CC-----Cc-HHHHHHHHHHHhcC-CEEEeCchhhhhhh-----HHHHHHHHhcCCEEEcCHHHHHHHhCCCCccHH---
Confidence 63 12 77888899999889 99999986443343 456778899999999999999999876543321
Q ss_pred HHHHhcCccEEEEEecCCceEEEecCceeeecCcccc-ccCCCCcchHHHHHHHHHHHcCCCccccccc
Q 044512 161 MSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVK-TIDTTGAGDAFVGSFLVSVAKDANIFNVKFR 228 (230)
Q Consensus 161 ~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~-~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 228 (230)
.|.+. ++.||||+|++|+++++++..+++++++++ ++||+||||+|+|||+++|++|+++++|.++
T Consensus 203 -~l~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~ 269 (302)
T 2c4e_A 203 -DYLER-VDALIVTKGSKGSVIYTKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYDLEKCGLI 269 (302)
T ss_dssp -HHHTT-CSEEEEECGGGCEEEECSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred -HHHhc-CCEEEEEECCCceEEEeCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHHcCCCHHHHHHH
Confidence 56667 899999999999999988888899999998 9999999999999999999999999998753
No 28
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=100.00 E-value=7.8e-35 Score=236.80 Aligned_cols=217 Identities=16% Similarity=0.223 Sum_probs=176.8
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCcccccccc-ccC----cccccccc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDS-ELN----MGLIKQAK 75 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~----~~~l~~~~ 75 (230)
++||+|.+|+.+++.|+++||+++++. ..+.+|+.++++++ +|++++..+ .+++..++++ ++. ...+++++
T Consensus 88 g~vG~D~~G~~i~~~L~~~gv~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~--~~a~~~~~~~~~~~~~~~~~~~~~~~ 163 (345)
T 1bx4_A 88 GCIGIDKFGEILKRKAAEAHVDAHYYE-QNEQPTGTCAACIT-GDNRSLIAN--LAAANCYKKEKHLDLEKNWMLVEKAR 163 (345)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEE-ESSSCCCEEEEEEE-TTEEEEEEE--CGGGGGCCGGGTTTSHHHHHHHHHCS
T ss_pred EEeCCChhHHHHHHHHHHcCCceeeee-cCCCCCceEEEEEc-CCceEeeec--cchHhhcCcccccCcHHHHHHHhhCC
Confidence 468999999999999999999999986 45668999999887 688876654 4555556666 554 24567899
Q ss_pred EEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCC---
Q 044512 76 IFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGG--- 152 (230)
Q Consensus 76 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~--- 152 (230)
++|++++.+ ..+.+.+.++++.+++.+.++++|++.. +| .+...+.+.++++++|++++|+.|+..|+|..
T Consensus 164 ~v~~~g~~~--~~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~ 237 (345)
T 1bx4_A 164 VCYIAGFFL--TVSPESVLKVAHHASENNRIFTLNLSAP--FI--SQFYKESLMKVMPYVDILFGNETEAATFAREQGFE 237 (345)
T ss_dssp EEEEEGGGG--GTCHHHHHHHHHHHHHTTCEEEEECCSH--HH--HHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCC
T ss_pred EEEEEEEec--cCCHHHHHHHHHHHHHcCCEEEEeCCcH--HH--HHHHHHHHHHHhccCCEEeCCHHHHHHHhcccCCC
Confidence 999998744 2456888999999999999999999731 11 12234567789999999999999999998743
Q ss_pred CcchHHHHHHHHh------cCccEEEEEecCCceEEEecCceeeecCccc---cccCCCCcchHHHHHHHHHHHcCCCcc
Q 044512 153 DAEKDDVVMSLWH------DNLKLLLVTYGAKGCGYFTKKFKGRVPGFSV---KTIDTTGAGDAFVGSFLVSVAKDANIF 223 (230)
Q Consensus 153 ~~~~~~~~~~l~~------~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~---~~~dt~GaGDaf~ag~~~~l~~g~~~~ 223 (230)
..+..++++.|.+ .|++.||||+|++|+++++++..++++++++ +++||+||||+|+|||+++|++|++++
T Consensus 238 ~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~g~~~~ 317 (345)
T 1bx4_A 238 TKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLT 317 (345)
T ss_dssp CCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCCHH
T ss_pred CCCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHHHHHcCCCHH
Confidence 2344567788887 5999999999999999998888889998877 899999999999999999999999999
Q ss_pred cccc
Q 044512 224 NVKF 227 (230)
Q Consensus 224 ~a~~ 227 (230)
+|.+
T Consensus 318 ~a~~ 321 (345)
T 1bx4_A 318 ECIR 321 (345)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9875
No 29
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=6.1e-35 Score=235.87 Aligned_cols=211 Identities=17% Similarity=0.126 Sum_probs=174.2
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccC--ccccccccEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELN--MGLIKQAKIFH 78 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~v~ 78 (230)
++||+|.+|+.+++.|++.||+++++...++.+|+.++++++++|++++.+.. .++...+.++.+. .+.+..+++++
T Consensus 63 ~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (328)
T 3kzh_A 63 SILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIAD-MKSIGAMNTDFIDSKREIFENAEYTV 141 (328)
T ss_dssp CEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEE-CGGGGGCCHHHHHHTHHHHHTCSEEE
T ss_pred EEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEc-hhhhhhCCHHHHHHHHHhhccCCEEE
Confidence 57999999999999999999999998877777899999999988998876542 3444445544443 24678899998
Q ss_pred EccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcc---
Q 044512 79 YGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAE--- 155 (230)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~--- 155 (230)
+++. .+ +.+..+++ +++.+.++++||++. ...+.+.++++++|++++|++|+..|+|....+
T Consensus 142 ~~~~-----~~-~~~~~l~~-a~~~~~~v~~D~~~~--------~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~ 206 (328)
T 3kzh_A 142 LDSD-----NP-EIMEYLLK-NFKDKTNFILDPVSA--------EKASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDD 206 (328)
T ss_dssp EESS-----CH-HHHHHHHH-HHTTTSEEEEECCSH--------HHHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHH
T ss_pred EeCC-----cH-HHHHHHHH-HhhcCCcEEEEeCCH--------HHHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHH
Confidence 8773 23 56666666 778899999999741 223446678899999999999999999976533
Q ss_pred hHHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 156 KDDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 156 ~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
..++++.|.+.|++.||||+|++|+++++++..+++++++++++||+||||+|+|||+++|++|+++++|.+
T Consensus 207 ~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~ 278 (328)
T 3kzh_A 207 LIKASNYFLGLGIKKVFISLDADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYMNKMPIEDIVK 278 (328)
T ss_dssp HHHHHHHHHHHTCCEEEEECGGGCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEeCCCCEEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHHHcCCCHHHHHH
Confidence 345677888889999999999999999998888999999999999999999999999999999999999865
No 30
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.3e-34 Score=232.89 Aligned_cols=212 Identities=19% Similarity=0.124 Sum_probs=170.0
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCc----cccccccE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNM----GLIKQAKI 76 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~ 76 (230)
++||+|.+|+.+++.|+++||++++ ...++.+|+.++++++++|++++.+++. .....++++.+.. ..+..+++
T Consensus 60 ~~vG~D~~G~~l~~~L~~~gV~~~~-~~~~~~~T~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (317)
T 2nwh_A 60 APRGGDVTGEVVAEAARQAGVEDTP-FTFLDRRTPSYTAILERDGNLVIALADM-DLYKLFTPRRLKVRAVREAIIASDF 137 (317)
T ss_dssp CEEESSHHHHHHHHHHHHTTCEECC-EEETTSCCCEEEEEECTTSCEEEEEEEC-GGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EeecCCchHHHHHHHHHHcCCCCCC-cccCCCCCceEEEEEcCCCCEEEEEcch-HHHhhCCHHHhhhhhhhhHhccCCE
Confidence 5799999999999999999999999 4556679999999998889988766532 3333455444432 45778999
Q ss_pred EEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcch
Q 044512 77 FHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEK 156 (230)
Q Consensus 77 v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~ 156 (230)
+++++. .+.+.+..+++.+++.+.++++||+.. ...+.+.++++++|++++|+.|+..|+|....+.
T Consensus 138 v~~~~~-----~~~~~~~~~~~~a~~~g~~v~~Dp~~~--------~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~ 204 (317)
T 2nwh_A 138 LLCDAN-----LPEDTLTALGLIARACEKPLAAIAISP--------AKAVKLKAALGDIDILFMNEAEARALTGETAENV 204 (317)
T ss_dssp EEEETT-----SCHHHHHHHHHHHHHTTCCEEEECCSH--------HHHGGGTTTGGGCSEEEEEHHHHHHHHC-----C
T ss_pred EEEeCC-----CCHHHHHHHHHHHHhcCCeEEEeCCCH--------HHHHHHHHHhhhCeEecCCHHHHHHHhCCChhHH
Confidence 988652 245788899999999999999999731 1123456788999999999999999998733333
Q ss_pred HHHHHHHHhcCccEEEEEecCCceEEEecC-ceeeecCccccccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 157 DDVVMSLWHDNLKLLLVTYGAKGCGYFTKK-FKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 157 ~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~-~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
.++++.|.+.|++.||||+|++|+++++++ ..+++++++++++||+||||+|+|||++++++|+++++|.+
T Consensus 205 ~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~ 276 (317)
T 2nwh_A 205 RDWPNILRKAGLSGGVVTRGASEVVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAEGKTIREALR 276 (317)
T ss_dssp TTHHHHHHHTTCCCEEEEETTTEEEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECCCcEEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHHHHHcCCCHHHHHH
Confidence 457788888999999999999999998766 46789998899999999999999999999999999999865
No 31
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=100.00 E-value=3.2e-34 Score=235.22 Aligned_cols=218 Identities=15% Similarity=0.182 Sum_probs=172.7
Q ss_pred CCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCc----cccccccEE
Q 044512 2 QFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNM----GLIKQAKIF 77 (230)
Q Consensus 2 ~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~v 77 (230)
+||+|.+|+.+++.|++.||+++++....+.+|+.++++++ +|+|++..+ .++...+.+++++. ..+++++++
T Consensus 108 ~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~--~ga~~~l~~~~i~~~~~~~~i~~a~~~ 184 (372)
T 3uq6_A 108 CIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--LGAACDLSLAHIEQPHVWSLVEKAQVY 184 (372)
T ss_dssp EECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--EEGGGGCCHHHHTSHHHHHHHHHCSEE
T ss_pred eecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEe--ccchhhcchhhhhhhhHHHHhhcccEE
Confidence 68999999999999999999999988887778999888875 788888877 35556666666653 467889999
Q ss_pred EEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCC---c
Q 044512 78 HYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGD---A 154 (230)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~---~ 154 (230)
|++++.+ ..+.+.+.++++.+++.+.++++|++.... ....++.+.++++++|++++|++|+..|++... .
T Consensus 185 ~~~g~~~--~~~~~~~~~~~~~a~~~g~~v~ldls~~~~----~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~ 258 (372)
T 3uq6_A 185 YIAGFVI--NTCYEGMLKIAKHSLENEKLFCFNLSAPFL----SQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLED 258 (372)
T ss_dssp EEEGGGH--HHHHHHHHHHHHHHHHTTCEEEEECCCHHH----HHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSS
T ss_pred EEecccc--cccHHHHHHHHHHHHHcCCeEeeccccchh----hhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchh
Confidence 9999744 345678889999999999999999973210 223467788899999999999999999987543 2
Q ss_pred chHHHHHHHHh-------cCccEEEEEecCCceEEEecCc--eeeecCc--c-ccccCCCCcchHHHHHHHHHHHcCCCc
Q 044512 155 EKDDVVMSLWH-------DNLKLLLVTYGAKGCGYFTKKF--KGRVPGF--S-VKTIDTTGAGDAFVGSFLVSVAKDANI 222 (230)
Q Consensus 155 ~~~~~~~~l~~-------~g~~~vvvt~g~~g~~~~~~~~--~~~~~~~--~-~~~~dt~GaGDaf~ag~~~~l~~g~~~ 222 (230)
+.+++++.+.. .+.+.||+|+|++|++++.++. ...++.+ + .+++|||||||+|+|||+++|++|+++
T Consensus 259 ~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~~l 338 (372)
T 3uq6_A 259 TVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPM 338 (372)
T ss_dssp HHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCCH
T ss_pred HHHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCCCH
Confidence 33445565553 4677899999999999987663 2334433 3 379999999999999999999999999
Q ss_pred cccccc
Q 044512 223 FNVKFR 228 (230)
Q Consensus 223 ~~a~~~ 228 (230)
++|.++
T Consensus 339 ~~a~~~ 344 (372)
T 3uq6_A 339 ITSLHA 344 (372)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998753
No 32
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=100.00 E-value=3.4e-34 Score=236.08 Aligned_cols=217 Identities=20% Similarity=0.209 Sum_probs=172.6
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEEc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHYG 80 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 80 (230)
++||+|.+|+.+++.|+++||+++++. ..+.+|+.++++++ +|+++++.+ .+++..+.+++.....+.+++++|++
T Consensus 112 g~vG~D~~G~~i~~~L~~~GV~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~--~~a~~~l~~~~~~~~~l~~~~~v~~~ 187 (383)
T 2abs_A 112 GAIGDDPRGQVLKELCDKEGLATRFMV-APGQSTGVCAVLIN-EKERTLCTH--LGACGSFRLPEDWTTFASGALIFYAT 187 (383)
T ss_dssp EEECSSHHHHHHHHHHHHHTCEEEEEE-CTTCCCEEEEEEEE-TTEEEEEEE--CGGGGGCCCCTTHHHHTTTCCEEEEE
T ss_pred EEecCChhHHHHHHHHHHcCCceeeee-cCCCCCeEEEEEEc-CCceeEeec--cChhhhCChhhhhHHHhhcCCEEEEe
Confidence 468999999999999999999999886 45668999999987 688877654 45555555543334567899999999
Q ss_pred cccccCchHHHHHHHHHHHHHH-CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCC-C-----
Q 044512 81 SISLISEPCRSAHMAALKAAKD-AGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGG-D----- 153 (230)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~-~----- 153 (230)
++.+. .+.+.+.++++.+++ .+.++++|++.. +| .+...+.+.++++++|++++|+.|++.|++.. .
T Consensus 188 g~~~~--~~~~~~~~~~~~a~~~~g~~v~~d~~~~--~~--~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~ 261 (383)
T 2abs_A 188 AYTLT--ATPKNALEVAGYAHGIPNAIFTLNLSAP--FC--VELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEK 261 (383)
T ss_dssp GGGGT--TCHHHHHHHHHHHHTSTTCEEEEECCCH--HH--HHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC----
T ss_pred eeccc--CCHHHHHHHHHHHHHhcCCEEEEeCCcH--HH--HHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCcccccc
Confidence 87542 355888999999998 899999998631 11 12234567789999999999999999997643 1
Q ss_pred ---------cchHHHHHHHHh------c-CccEEEEEecCCceEEE-----ecCceeeecCccc---cccCCCCcchHHH
Q 044512 154 ---------AEKDDVVMSLWH------D-NLKLLLVTYGAKGCGYF-----TKKFKGRVPGFSV---KTIDTTGAGDAFV 209 (230)
Q Consensus 154 ---------~~~~~~~~~l~~------~-g~~~vvvt~g~~g~~~~-----~~~~~~~~~~~~~---~~~dt~GaGDaf~ 209 (230)
.+..++++.|.+ . |++.||||+|++|++++ .++..++++++++ +++||+||||+|+
T Consensus 262 ~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ 341 (383)
T 2abs_A 262 TALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFV 341 (383)
T ss_dssp ------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHH
T ss_pred cccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCChHHHHH
Confidence 122356667766 3 89999999999999998 5667788888776 8999999999999
Q ss_pred HHHHHHHHcCCCcccccc
Q 044512 210 GSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 210 ag~~~~l~~g~~~~~a~~ 227 (230)
|||+++|++|+++++|.+
T Consensus 342 ag~~~~l~~g~~l~~al~ 359 (383)
T 2abs_A 342 GGFLYALSQGKTVKQCIM 359 (383)
T ss_dssp HHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHH
Confidence 999999999999999865
No 33
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=100.00 E-value=2.6e-34 Score=229.30 Aligned_cols=194 Identities=17% Similarity=0.222 Sum_probs=167.4
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccC--ccccccccEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELN--MGLIKQAKIFH 78 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~v~ 78 (230)
++||+|.+|+.+++.|+++||+++++. .++.+|+.+++.++++|++++..+ .+++..++++++. .+.++++++++
T Consensus 60 ~~vG~D~~g~~i~~~l~~~gv~~~~v~-~~~~~T~~~~~~~~~~g~~~~~~~--~~a~~~l~~~~~~~~~~~~~~~~~v~ 136 (299)
T 3ikh_A 60 AATGNDSNGAWIRQQIKNEPLMLLPDG-HFNQHSDTSIILNSADGDNAIITT--TAAADTFSLDEMIPHMADAVAGDILL 136 (299)
T ss_dssp CCCCSSHHHHHHHHHGGGSSCEEESSS-CCSSCCEEEEEECSSSCSCEEEEE--CHHHHHCCHHHHGGGGTTCCTTCEEE
T ss_pred EEECCCHHHHHHHHHHHHcCCceeeeE-ecCCCCcEEEEEEcCCCCeEEEEe--CCccccCCHHHHHHHHhhhccCCEEE
Confidence 579999999999999999999999985 566799999999988899988776 4555566666554 34678999999
Q ss_pred EccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHH
Q 044512 79 YGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDD 158 (230)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~ 158 (230)
+++. .+.+.+.++++.+++.+.++++||++.. +.+.++++++|++++|++|++.|++
T Consensus 137 ~~g~-----~~~~~~~~~~~~a~~~g~~v~~D~~~~~----------~~~~~ll~~~dil~~N~~E~~~l~g-------- 193 (299)
T 3ikh_A 137 QQGN-----FSLDKTRALFQYARSRGMTTVFNPSPVN----------PDFCHLWPLIDIAVVNESEAELLQP-------- 193 (299)
T ss_dssp ECSC-----SCHHHHHHHHHHHHHTTCEEEECCCSCC----------GGGGGCGGGCSEEEEEHHHHHHHCC--------
T ss_pred ECCC-----CCHHHHHHHHHHHHHcCCEEEEccccch----------hhHHHHHhhCCEEEecHHHHHHHhc--------
Confidence 8863 2457888999999999999999998642 2456788999999999999999987
Q ss_pred HHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHH-HHHHHHHcCCCccc-ccc
Q 044512 159 VVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVG-SFLVSVAKDANIFN-VKF 227 (230)
Q Consensus 159 ~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~a-g~~~~l~~g~~~~~-a~~ 227 (230)
.|++.|+||+|++|+++++++..+++++++++++||+||||+|+| ||+++|++|+++++ |.+
T Consensus 194 -------~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l~~g~~~~~~a~~ 257 (299)
T 3ikh_A 194 -------YGVKTLVITQGAAGAWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASALLRGVAPDALALA 257 (299)
T ss_dssp -------CSCSEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTTSSSCHHHHH
T ss_pred -------CCCCEEEEEECCCceEEEeCCceEEeCCCCCccCCCCCchHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 578899999999999999988899999999999999999999999 99999999999999 764
No 34
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=100.00 E-value=2.1e-33 Score=226.09 Aligned_cols=206 Identities=21% Similarity=0.224 Sum_probs=167.5
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCe--eeEEEecCCCccccccccccC------ccccc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGE--REFMFYRNPSADMLLKDSELN------MGLIK 72 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~--~~~~~~~~~~~~~~~~~~~~~------~~~l~ 72 (230)
++||+| +|+.+++.|++.||+++++....+ +|+.++++++ +|+ +++... .+. .+.++++. .+.++
T Consensus 60 ~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~-~t~~~~~~~~-~g~~~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~ 132 (320)
T 3ie7_A 60 GIAGSD-NLDKLYAILKEKHINHDFLVEAGT-STRECFVVLS-DDTNGSTMIPE--AGF--TVSQTNKDNLLKQIAKKVK 132 (320)
T ss_dssp EEEEST-THHHHHHHHHHTTCCBCCEEETTC-CCEEEEEEEE-TTCSCCEEEEC--CCC--CCCHHHHHHHHHHHHHHCC
T ss_pred EEecCc-hHHHHHHHHHHcCCceEEEEecCC-CCceEEEEEE-CCCceeEEEeC--CCC--CCCHHHHHHHHHHHHHHhc
Confidence 468999 999999999999999999955555 8999999988 677 776554 232 34444433 14578
Q ss_pred cccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh-hCcEEeeCHHHHhhhcCC
Q 044512 73 QAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWN-HADLIKVSDDEVNFLTKG 151 (230)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dil~~n~~E~~~l~~~ 151 (230)
+++++|++|+ +....+.+.+.++++.+++.+.++++||++ +.+.+.+. ++|++++|+.|+..|+|.
T Consensus 133 ~~~~v~~~g~-~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~------------~~l~~~l~~~~dil~~N~~E~~~l~g~ 199 (320)
T 3ie7_A 133 KEDMVVIAGS-PPPHYTLSDFKELLRTVKATGAFLGCDNSG------------EYLNLAVEMGVDFIKPNEDEVIAILDE 199 (320)
T ss_dssp TTCEEEEESC-CCTTCCHHHHHHHHHHHHHHTCEEEEECCH------------HHHHHHHHHCCSEECCBTTGGGGGSCT
T ss_pred CCCEEEEeCC-CCCCCCHHHHHHHHHHHHhcCCEEEEECCh------------HHHHHHHhcCCeEEeeCHHHHHHHhCC
Confidence 9999999886 444556788899999999999999999972 34555565 999999999999999998
Q ss_pred CCcchHHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 152 GDAEKDDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 152 ~~~~~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
......+.+..+... ++.||||+|++|+++++++..+++++++++++||+||||+|+|||++++++|+++++|.+
T Consensus 200 ~~~~~~~~~~~~~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~~~~a~~ 274 (320)
T 3ie7_A 200 KTNSLEENIRTLAEK-IPYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMPITETLK 274 (320)
T ss_dssp TCCCHHHHHHHHTTT-CSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CcCCCHHHHHHHHhh-CCEEEEEcCCCceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHHHHHHHcCCCHHHHHH
Confidence 765222334444444 889999999999999999999999999999999999999999999999999999999875
No 35
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=100.00 E-value=1.6e-33 Score=225.77 Aligned_cols=193 Identities=20% Similarity=0.259 Sum_probs=166.5
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEEc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHYG 80 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 80 (230)
++||+|.+|+.+++.|+++||+++++... +.+|+.+++.++++|+++++.+. +++..++ ++ .+.+++++++|++
T Consensus 77 ~~vG~D~~g~~i~~~L~~~gV~~~~v~~~-~~~T~~~~~~~~~~g~~~~~~~~--ga~~~l~--~~-~~~l~~~~~v~~~ 150 (310)
T 3go6_A 77 GAFGDDPAAAQLRAHLRANAVGLDRTVTV-PGPSGTAIIVVDASAENTVLVAP--GANAHLT--PV-PSAVANCDVLLTQ 150 (310)
T ss_dssp CEECSSHHHHHHHHHHHHTTCBCTTCEEC-SSCCEEEEEEECTTSCEEEEEEC--GGGGGCC--CC-TTTTTTCSEEEEC
T ss_pred EEECCCHHHHHHHHHHHHcCCccceeEec-CCCCCEEEEEEcCCCCEEEEecC--ChhhhHH--HH-HHHhhcCCEEEEC
Confidence 57999999999999999999999999654 45999999999988999988773 4444444 44 5667899999887
Q ss_pred cccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHHHH
Q 044512 81 SISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDDVV 160 (230)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~ 160 (230)
+ +.+.+.+.++++.+++.+.++++||+++.. ..+.+.++++++|++++|++|++.|++.
T Consensus 151 ~-----~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~-------~~~~~~~ll~~~dil~~N~~Ea~~l~g~--------- 209 (310)
T 3go6_A 151 L-----EIPVATALAAARAAQSADAVVMVNASPAGQ-------DRSSLQDLAAIADVVIANEHEANDWPSP--------- 209 (310)
T ss_dssp S-----SSCHHHHHHHHHHHHHTTCEEEEECCSSSC-------CHHHHHHHHHHCSEEEEEHHHHHHSSSC---------
T ss_pred C-----CCCHHHHHHHHHHHHHcCCEEEEcCCcccc-------chHHHHHHHhhCCEEEeCHHHHHHHhCC---------
Confidence 5 234678889999999999999999986532 2466778999999999999999999775
Q ss_pred HHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHc----CCCcccccc
Q 044512 161 MSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAK----DANIFNVKF 227 (230)
Q Consensus 161 ~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~----g~~~~~a~~ 227 (230)
++.||||+|++|+++++++..+++++++++++||+||||+|+|||+++|++ |+++++|.+
T Consensus 210 -------~~~vvvt~G~~Ga~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~~~~~g~~l~~a~~ 273 (310)
T 3go6_A 210 -------PTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALR 273 (310)
T ss_dssp -------CSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHCCSSSCCHHHHHHHHH
T ss_pred -------CCEEEEEECCCCEEEEECCceEEeCCCCCCcCcCCCchHHHHHHHHHHHHhcccCCCCHHHHHH
Confidence 679999999999999999989999999999999999999999999999999 999998865
No 36
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=3.4e-33 Score=224.01 Aligned_cols=205 Identities=21% Similarity=0.312 Sum_probs=168.2
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEEc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHYG 80 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 80 (230)
++||+|.+|+.+++.|++.|| ++...++.+|+.+++.++++|++++..++ +++..+++++++...++++++++++
T Consensus 73 ~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~--ga~~~l~~~~~~~~~~~~~~~v~~~ 147 (311)
T 1vm7_A 73 TCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFP--GANAELKKELIDWNTLSESDILLLQ 147 (311)
T ss_dssp EEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEEC--GGGGGCCGGGCCHHHHTTCSEEEEC
T ss_pred EEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEec--CccccCCHHHhChhhcccCCEEEEe
Confidence 478999999999999999999 67666667999999999888999988773 5555677766665667899999987
Q ss_pred cccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCC---CcchH
Q 044512 81 SISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGG---DAEKD 157 (230)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~---~~~~~ 157 (230)
+.. +.+.+..+ +++.+.++++||++... .+.++++++|++++|+.|+..|+|.. ..+..
T Consensus 148 ~~~-----~~~~~~~~---a~~~~~~v~~Dp~~~~~----------~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~ 209 (311)
T 1vm7_A 148 NEI-----PFETTLEC---AKRFNGIVIFDPAPAQG----------INEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVE 209 (311)
T ss_dssp SSS-----CHHHHHHH---HHHCCSEEEECCCSCTT----------CCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHH
T ss_pred CCC-----CHHHHHHH---HHHcCCEEEEeCcchhh----------hhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHH
Confidence 632 22333333 77889999999986422 22467899999999999999998752 23345
Q ss_pred HHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCccccccc
Q 044512 158 DVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKFR 228 (230)
Q Consensus 158 ~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 228 (230)
++++.|.+.|++.|++|+|++|+++++++..+++++++++++||+||||+|+|||++++++|+++++|.++
T Consensus 210 ~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~ 280 (311)
T 1vm7_A 210 KAAEKFLELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIF 280 (311)
T ss_dssp HHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEECCCCeEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 67888888999999999999999999888888999999999999999999999999999999999998753
No 37
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=100.00 E-value=1.1e-33 Score=228.22 Aligned_cols=206 Identities=21% Similarity=0.261 Sum_probs=166.8
Q ss_pred CCCCC-ChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEE
Q 044512 1 MQFGD-DEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHY 79 (230)
Q Consensus 1 t~vG~-D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~ 79 (230)
++||+ | +|+ +++.|++.||+++++.+..+.+|+.+++.++++|++++..+ .++...+.+.++.. . ++++++|+
T Consensus 68 ~~vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~--~ga~~~~~~~~~~~-~-~~~~~v~~ 141 (326)
T 3b1n_A 68 GTLGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFH--PGAMMQSHVNHAGE-A-KDIKLAIV 141 (326)
T ss_dssp EEEETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEE--CGGGGGGGGSCGGG-C-CSCSEEEE
T ss_pred EEECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEe--cChhhhcChhhccc-c-cCCCEEEE
Confidence 46899 9 899 99999999999999987777789999999988888877665 34444454444432 2 78899988
Q ss_pred ccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHHH
Q 044512 80 GSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDDV 159 (230)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~ 159 (230)
++. ..+.+.++++.+++.+.++++||+++..+|. .+.+.++++++|++++|++|+..|++....+.+
T Consensus 142 ~~~------~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~-- 208 (326)
T 3b1n_A 142 GPD------GFQGMVQHTEELAQAGVPFIFDPGQGLPLFD-----GATLRRSIELATYIAVNDYEAKLVCDKTGWSED-- 208 (326)
T ss_dssp CSC------CHHHHHHHHHHHHHHTCCEEECCGGGGGGCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHHCCCHH--
T ss_pred CCc------cHHHHHHHHHHHHHCCCEEEEeCchhhhhcc-----HHHHHHHHHhCCEEecCHHHHHHHhCCCCCCHH--
Confidence 764 2367788888899899999999987655554 355678899999999999999999875433322
Q ss_pred HHHHHhcCccEEEEEecCCceEEEecCceeeecCcccc-ccCCCCcchHHHHHHHHHHHcCCCccccccc
Q 044512 160 VMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVK-TIDTTGAGDAFVGSFLVSVAKDANIFNVKFR 228 (230)
Q Consensus 160 ~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~-~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 228 (230)
.+.+ +++.||||+|++|+++++++..+++++++++ ++||+||||+|+|||++++++|+++++|.++
T Consensus 209 --~l~~-~~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g~~~~~a~~~ 275 (326)
T 3b1n_A 209 --EIAS-RVQALIITRGEHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHGFDWATAGRL 275 (326)
T ss_dssp --HHHT-TSSEEEEECGGGCEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred --HHHh-cCCEEEEecCCCceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcCCCHHHHHHH
Confidence 2333 3789999999999999988888899998886 7899999999999999999999999998753
No 38
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=100.00 E-value=1.3e-33 Score=228.50 Aligned_cols=207 Identities=21% Similarity=0.227 Sum_probs=168.8
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCcc--ccccccEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMG--LIKQAKIFH 78 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~v~ 78 (230)
++||+| +|+ +++.|++.||+++++.+.++.+|+.+++.++++|++++..+. ++...+.++++... .+++++++|
T Consensus 78 ~~vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~--ga~~~~~~~~~~~~~~~l~~~~~v~ 153 (334)
T 2pkf_A 78 GAAGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYP--GAMSEARNIKLADVVSAIGKPELVI 153 (334)
T ss_dssp CEECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEEC--GGGGGGGGCCHHHHHHHHCSCSEEE
T ss_pred EEEeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECC--chhhhCCHhhcChhhhhhcCCCEEE
Confidence 579999 999 999999999999999887777999999999888888877663 44444555554322 347899999
Q ss_pred EccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHH
Q 044512 79 YGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDD 158 (230)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~ 158 (230)
+++.. .+.+.++++.+++.+.++++||+++..+|+ .+.+.++++++|++++|+.|+..|+|....+.+
T Consensus 154 ~~~~~------~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~l~~~l~~~dil~~N~~E~~~l~g~~~~~~~- 221 (334)
T 2pkf_A 154 IGAND------PEAMFLHTEECRKLGLAFAADPSQQLARLS-----GEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSEA- 221 (334)
T ss_dssp EESCC------HHHHHHHHHHHHHHTCCEEEECGGGGGTSC-----HHHHHTTTTTCSEEEEEHHHHHHHHHHHCCCHH-
T ss_pred EcCCC------hHHHHHHHHHHHhcCCeEEEeccchhhhhh-----HHHHHHHHhcCCEEecCHHHHHHHhccCCCCHH-
Confidence 88742 367788888899889999999987766664 356678899999999999999999875433322
Q ss_pred HHHHHHhcCccEEEEEecCCceEEEecCc-eeeecCcccc-ccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 159 VVMSLWHDNLKLLLVTYGAKGCGYFTKKF-KGRVPGFSVK-TIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 159 ~~~~l~~~g~~~vvvt~g~~g~~~~~~~~-~~~~~~~~~~-~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
.+.+. ++.||||+|++|+++++++. .+++++++++ ++||+||||+|+|||++++++|+++++|.+
T Consensus 222 ---~l~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g~~~~~a~~ 288 (334)
T 2pkf_A 222 ---DVMAQ-IDLRVTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLGLERSAQ 288 (334)
T ss_dssp ---HHHTT-CSCEEEECGGGCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred ---HHHhc-CCEEEEEeCCCCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcCCCHHHHHH
Confidence 34443 78999999999999988876 8899998886 789999999999999999999999999865
No 39
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=100.00 E-value=1.6e-33 Score=229.26 Aligned_cols=210 Identities=17% Similarity=0.196 Sum_probs=163.5
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCcccccccccc--CccccccccEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSEL--NMGLIKQAKIFH 78 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~v~ 78 (230)
++||+|.+|+.+++.|+++||++. +...++.+|+.+++.++++++++.+... ...+.......+ ....++++++++
T Consensus 114 g~vG~D~~G~~i~~~L~~~GV~~~-~~~~~~~~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~v~ 191 (352)
T 4e84_A 114 CVVGCDEPGERIVELLGSSGVTPH-LERDPALPTTIKLRVLARQQQLLRVDFE-AMPTHEVLLAGLARFDVLLPQHDVVL 191 (352)
T ss_dssp EEEESSHHHHHHHHHHTTTSCEEE-EEEETTSCCCEEEEEEESSCEEEEEEEC-CCCCHHHHHHHHHHHHHHGGGCSEEE
T ss_pred EEeCCChhHHHHHHHHHHcCCcee-eEECCCCCCceEEEEEcCCceEEEEEcC-CCCCHHHHHHHHHHHHHhcccCCEEE
Confidence 468999999999999999999995 5556677999999998876665444321 222212221111 134678999999
Q ss_pred EccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCC--cch
Q 044512 79 YGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGD--AEK 156 (230)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~--~~~ 156 (230)
++++... +.+.+.++++.+++.|.++++||++. .| ++++++|++++|+.|++.|+|... .+.
T Consensus 192 ~~g~~~~---~~~~~~~~~~~a~~~g~~v~~D~~~~--~~-----------~~l~~~dil~pN~~Ea~~l~g~~~~~~~~ 255 (352)
T 4e84_A 192 MSDYAKG---GLTHVTTMIEKARAAGKAVLVDPKGD--DW-----------ARYRGASLITPNRAELREVVGQWKSEDDL 255 (352)
T ss_dssp EECCSSS---SCSSHHHHHHHHHHTTCEEEEECCSS--CC-----------STTTTCSEECCBHHHHHHHHCCCSSHHHH
T ss_pred EeCCCCC---CHHHHHHHHHHHHhcCCEEEEECCCc--ch-----------hhccCCcEEcCCHHHHHHHhCCCCCHHHH
Confidence 9976421 22346788899999999999999853 22 367899999999999999999322 122
Q ss_pred HHHHHHHHh-cCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCccccccc
Q 044512 157 DDVVMSLWH-DNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKFR 228 (230)
Q Consensus 157 ~~~~~~l~~-~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 228 (230)
.++++.|.. .|++.||||+|++|+++++++..+++++++++++||+||||+|+|||+++|++|+++++|.++
T Consensus 256 ~~~a~~l~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~g~~l~~al~~ 328 (352)
T 4e84_A 256 RARVANLRAELDIDALLLTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGAGVPLVDAVVL 328 (352)
T ss_dssp HHHHHHHHHHHTCSEEEEECGGGCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEcCCCcEEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHHcCCCHHHHHHH
Confidence 345667764 799999999999999999999999999999999999999999999999999999999998753
No 40
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=100.00 E-value=1.4e-32 Score=220.37 Aligned_cols=207 Identities=20% Similarity=0.225 Sum_probs=166.3
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEec-CCeeeEEEecCCCccccccccccCc-----cccccc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKK-NGEREFMFYRNPSADMLLKDSELNM-----GLIKQA 74 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~ 74 (230)
++||+| +|+.+++.|+++||+++++....+ |+.++++++. +|++++..+. ++. +++++++. ..+..+
T Consensus 59 ~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~--t~~~~~~~~~~~g~~~~~~~~--g~~--~~~~~~~~~~~~~~~~~~~ 131 (309)
T 3umo_A 59 FPAGGA-TGEHLVSLLADENVPVATVEAKDW--TRQNLHVHVEASGEQYRFVMP--GAA--LNEDEFRQLEEQVLEIESG 131 (309)
T ss_dssp EEECHH-HHHHHHHHHHHTTCCEEEEECSSC--CCCCEEEEETTTCCEEEEECC--CCC--CCHHHHHHHHHHHTTSCTT
T ss_pred EEecCc-hHHHHHHHHHHcCCceEEEEecCC--CeeEEEEEECCCCcEEEEEcC--CCC--CCHHHHHHHHHHHHhcCCC
Confidence 468999 999999999999999999876544 4444444444 7888776653 332 44444321 123577
Q ss_pred cEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhh--CcEEeeCHHHHhhhcCCC
Q 044512 75 KIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNH--ADLIKVSDDEVNFLTKGG 152 (230)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~--~dil~~n~~E~~~l~~~~ 152 (230)
+++++++. +..+.+.+.+.++++.+++.+.++++||+ ...+.++++. +|++++|+.|++.|+|..
T Consensus 132 ~~~~~~g~-~~~~~~~~~~~~~~~~a~~~~~~v~~D~~------------~~~l~~~l~~~~~dil~~N~~E~~~l~g~~ 198 (309)
T 3umo_A 132 AILVISGS-LPPGVKLEKLTQLISAAQKQGIRCIVDSS------------GEALSAALAIGNIELVKPNQKELSALVNRE 198 (309)
T ss_dssp CEEEEESC-CCTTCCHHHHHHHHHHHHHTTCEEEEECC------------HHHHHHHTSSCCBSEECCBHHHHHHHHTSC
T ss_pred CEEEEEcc-CCCCCCHHHHHHHHHHHHhcCCEEEEECC------------cHHHHHHhccCCCeEEEeCHHHHHHHhCCC
Confidence 89999986 44455678899999999999999999996 2456777877 599999999999999976
Q ss_pred Cc---chHHHHHHHHhcCc-cEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 153 DA---EKDDVVMSLWHDNL-KLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 153 ~~---~~~~~~~~l~~~g~-~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
.. +..++++.|++.+. +.|+||+|++|+++++++..+++++++++++||+||||+|+|||+++|++|+++++|.+
T Consensus 199 ~~~~~~~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~~~l~~g~~~~~a~~ 277 (309)
T 3umo_A 199 LTQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVR 277 (309)
T ss_dssp CCSTTHHHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEEcCcccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHHHHHHcCCCHHHHHH
Confidence 43 33456788888887 79999999999999999888999999999999999999999999999999999999865
No 41
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=100.00 E-value=1.2e-32 Score=222.50 Aligned_cols=206 Identities=13% Similarity=0.162 Sum_probs=164.1
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCc------cccccc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNM------GLIKQA 74 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~l~~~ 74 (230)
++||+ .+|+.+++.|++.||+++++.... .|++++++++++ +++.... .++ .+++++++. ..++++
T Consensus 77 ~~vG~-~~G~~l~~~L~~~gV~~~~v~~~~--~t~~~~~~v~~~-~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~ 148 (330)
T 2jg1_A 77 GFIGG-ELGQFIAKKLDHADIKHAFYNIKG--ETRNCIAILHEG-QQTEILE--QGP--EIDNQEAAGFIKHFEQMMEKV 148 (330)
T ss_dssp EEEEH-HHHHHHHHHHHHTTCEECCEEESS--CCEEEEEEEETT-EEEEEEE--CCC--BCCHHHHHHHHHHHHHHGGGC
T ss_pred EEecc-hhHHHHHHHHHHCCCceeEEEccC--CCeeEEEEEeCC-CcEEEEC--CCC--CCCHHHHHHHHHHHHHhcCCC
Confidence 46896 699999999999999999987654 377777777765 5554332 233 244333321 236789
Q ss_pred cEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh---hCcEEeeCHHHHhhhcCC
Q 044512 75 KIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWN---HADLIKVSDDEVNFLTKG 151 (230)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~---~~dil~~n~~E~~~l~~~ 151 (230)
+++|+++... .+.+.+.+.++++.+++.+.++++||+. ..+.++++ ++|++++|++|+..|+|.
T Consensus 149 ~~v~~~g~~~-~~~~~~~~~~~~~~a~~~g~~v~~D~~~------------~~l~~~l~~~~~~dil~~N~~E~~~l~g~ 215 (330)
T 2jg1_A 149 EAVAISGSLP-KGLNQDYYAQIIERCQNKGVPVILDCSG------------ATLQTVLENPYKPTVIKPNISELYQLLNQ 215 (330)
T ss_dssp SEEEEESCCC-BTSCTTHHHHHHHHHHTTTCCEEEECCH------------HHHHHHHTSSSCCSEECCBHHHHHHHTTS
T ss_pred CEEEEECCCC-CCCCHHHHHHHHHHHHHCCCEEEEECCc------------HHHHHHHhccCCceEEEeCHHHHHHHhCC
Confidence 9999988543 3445577888999999999999999972 34566776 899999999999999987
Q ss_pred CCc----chHHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 152 GDA----EKDDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 152 ~~~----~~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
... +..++++.|.+.|++.||||+|++|+++++++..+++++++++++||+||||+|+|||+++|++|+++++|.+
T Consensus 216 ~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~l~~al~ 295 (330)
T 2jg1_A 216 PLDESLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHENDHDLLK 295 (330)
T ss_dssp CCCCCHHHHHHHHHSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 543 3345677788889999999999999999988888899999999999999999999999999999999999865
No 42
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=100.00 E-value=2.4e-32 Score=219.23 Aligned_cols=207 Identities=16% Similarity=0.247 Sum_probs=162.9
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEe-cCCeeeEEEecCCCccccccccccCccccccccEEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLK-KNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHY 79 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~ 79 (230)
++||+|.+|+.+++.|+++||+++++...++.+|+.++++++ ++|+++++.++ ++...+++++++...+++++++|+
T Consensus 75 g~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~--~~~~~~~~~~~~~~~l~~~~~v~~ 152 (312)
T 2hlz_A 75 GSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYD--RSLPDVSATDFEKVDLTQFKWIHI 152 (312)
T ss_dssp EEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEEC--CCCCCCCHHHHHTSCGGGEEEEEE
T ss_pred EEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecC--CccccCCHHHhhHhhhccCCEEEE
Confidence 478999999999999999999999998775557888777776 47888887764 334456655554445788999999
Q ss_pred ccccccCchHHHHHHHHHHHHHHC--------CCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCC
Q 044512 80 GSISLISEPCRSAHMAALKAAKDA--------GVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKG 151 (230)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~ 151 (230)
+++. .+...++++.+++. +.++++|+... .+.+.++++++|++++|++|+..+ +.
T Consensus 153 ~~~~------~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~----------~~~~~~~l~~~dil~~n~~ea~~l-g~ 215 (312)
T 2hlz_A 153 EGRN------ASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP----------REELFQLFGYGDVVFVSKDVAKHL-GF 215 (312)
T ss_dssp ECSS------HHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC----------CGGGGGGGGSSSEEEECHHHHHHT-TC
T ss_pred eccC------HHHHHHHHHHHHHhcccccCCCCeEEEEEcccc----------hHHHHHHHhcCCEEEEcHHHHHHc-CC
Confidence 9862 24556777777665 67899998642 134567899999999999999987 54
Q ss_pred CCcchHHHHHHHHhcCc--cEEEEEecCCceEEEec-CceeeecCc-cccccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 152 GDAEKDDVVMSLWHDNL--KLLLVTYGAKGCGYFTK-KFKGRVPGF-SVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 152 ~~~~~~~~~~~l~~~g~--~~vvvt~g~~g~~~~~~-~~~~~~~~~-~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
. +.+++++.+...+. +.||||+|++|++++++ +..++++++ +++++||+||||+|+|||+++|++|+++++|.+
T Consensus 216 ~--~~~~~~~~l~~~~~~g~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~~g~~~~~a~~ 293 (312)
T 2hlz_A 216 Q--SAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALR 293 (312)
T ss_dssp C--SHHHHHHHHGGGSCTTCEEEEECGGGCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred C--CHHHHHHHHHHhcCCCCEEEEEecccCeEEEccCCCEEECCCCCCCCcccCCCchHHHHHHHHHHHHcCCCHHHHHH
Confidence 2 34567777766433 89999999999999875 457788885 568999999999999999999999999999875
Q ss_pred c
Q 044512 228 R 228 (230)
Q Consensus 228 ~ 228 (230)
+
T Consensus 294 ~ 294 (312)
T 2hlz_A 294 F 294 (312)
T ss_dssp H
T ss_pred H
Confidence 3
No 43
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=100.00 E-value=2.3e-32 Score=219.03 Aligned_cols=207 Identities=20% Similarity=0.243 Sum_probs=162.8
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEE-EecCCeeeEEEecCCCccccccccccC------cccccc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVT-LKKNGEREFMFYRNPSADMLLKDSELN------MGLIKQ 73 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~-~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~l~~ 73 (230)
++||+| +|+.+++.|+++||+++++....+ |++++++ ++++|+++.... .++. +.+++++ .+.+++
T Consensus 59 ~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~--t~~~~~~~~~~~g~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~ 131 (309)
T 3cqd_A 59 FPAGGA-TGEHLVSLLADENVPVATVEAKDW--TRQNLHVHVEASGEQYRFVM--PGAA--LNEDEFRQLEEQVLEIESG 131 (309)
T ss_dssp EEECHH-HHHHHHHHHHHTTCCEEEEECSSC--CCCCEEEEETTTCCEEEEEC--CCCC--CCHHHHHHHHHHHHTSCTT
T ss_pred EEecCc-hHHHHHHHHHHcCCCceeEEcCCC--CeeEEEEEEcCCCCEEEEEc--CCCC--CCHHHHHHHHHHHHHhhcC
Confidence 468998 999999999999999999876544 5555555 677788765443 3322 3333332 134677
Q ss_pred ccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHh-hhC-cEEeeCHHHHhhhcCC
Q 044512 74 AKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIW-NHA-DLIKVSDDEVNFLTKG 151 (230)
Q Consensus 74 ~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~-dil~~n~~E~~~l~~~ 151 (230)
+++|+++. +....+.+.+.++++.+++.+.++++||+. ..+.+.+ +.+ |++++|++|++.|+|.
T Consensus 132 -~~v~~~g~-~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~------------~~~~~~l~~~~~dil~~N~~E~~~l~g~ 197 (309)
T 3cqd_A 132 -AILVISGS-LPPGVKLEKLTQLISAAQKQGIRCIVDSSG------------EALSAALAIGNIELVKPNQKELSALVNR 197 (309)
T ss_dssp -CEEEEESC-CCTTCCHHHHHHHHHHHHTTTCEEEEECCH------------HHHHHHTTTCCBSEECCBHHHHHHHHTS
T ss_pred -CEEEEECC-CCCCCCHHHHHHHHHHHHHcCCeEEEECCh------------HHHHHHHHhCCCEEEeeCHHHHHHHhCC
Confidence 99999986 333455678889999999999999999972 1234434 788 9999999999999987
Q ss_pred CCc---chHHHHHHHHhcC-ccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 152 GDA---EKDDVVMSLWHDN-LKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 152 ~~~---~~~~~~~~l~~~g-~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
... +..++++.|++.| ++.|++|+|++|+++++++..+++++++++++||+||||+|+|||++++++|+++++|.+
T Consensus 198 ~~~~~~~~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~ 277 (309)
T 3cqd_A 198 ELTQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVR 277 (309)
T ss_dssp CCCSTTHHHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCCEEEEEecCCceEEEECCceEEEeCCccccCCCcCcHHHHHHHHHHHHHcCCCHHHHHH
Confidence 543 2345678888889 999999999999999988888899999999999999999999999999999999999875
Q ss_pred c
Q 044512 228 R 228 (230)
Q Consensus 228 ~ 228 (230)
+
T Consensus 278 ~ 278 (309)
T 3cqd_A 278 F 278 (309)
T ss_dssp H
T ss_pred H
Confidence 3
No 44
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=100.00 E-value=4.1e-32 Score=217.29 Aligned_cols=205 Identities=15% Similarity=0.186 Sum_probs=163.7
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCc--cc---ccccc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNM--GL---IKQAK 75 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~---l~~~~ 75 (230)
++||+ .+|+.+++.|++.||+++++.... .|+.++++ ++|+++.... .++ .+++++++. .. +++++
T Consensus 57 ~~vG~-~~g~~i~~~L~~~gv~~~~v~~~~--~t~~~~~~--~~g~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~ 127 (306)
T 2abq_A 57 GFLGG-FTGAYVRNALEKEEIGLSFIEVEG--DTRINVKI--KGKQETELNG--TAP--LIKKEHVQALLEQLTELEKGD 127 (306)
T ss_dssp EEEEH-HHHHHHHHHHHHTTCEECCEEESS--CCEEEEEE--ESSSCEEEBC--CCC--CCCHHHHHHHHHHHTTCCTTC
T ss_pred EEecc-hhHHHHHHHHHHcCCceEEEEcCC--CCceEEEE--eCCceEEEEC--CCC--CCCHHHHHHHHHHHHhccCCC
Confidence 46898 799999999999999999997654 36666655 4677764332 232 244443321 11 57899
Q ss_pred EEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh-hCcEEeeCHHHHhhhcCCCCc
Q 044512 76 IFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWN-HADLIKVSDDEVNFLTKGGDA 154 (230)
Q Consensus 76 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dil~~n~~E~~~l~~~~~~ 154 (230)
++|+++.. ..+.+.+.+.++++.+++.+.++++||+. +.+.++++ ++|++++|++|+..|+|....
T Consensus 128 ~v~~~g~~-~~~~~~~~~~~~~~~a~~~g~~v~~D~~~------------~~~~~~l~~~~dil~~N~~E~~~l~g~~~~ 194 (306)
T 2abq_A 128 VLVLAGSV-PQAMPQTIYRSMTQIAKERGAFVAVDTSG------------EALHEVLAAKPSFIKPNHHELSELVSKPIA 194 (306)
T ss_dssp EEEEESCC-CTTSCTTHHHHHHHHHHTTTCEEEEECCH------------HHHHHHGGGCCSEECCBHHHHHHHHTSCCC
T ss_pred EEEEecCC-CCCCCHHHHHHHHHHHHhcCCEEEEECCh------------HHHHHHHhcCCcEEecCHHHHHHHhCCCCC
Confidence 99998853 33445577888999999999999999972 34677888 999999999999999987643
Q ss_pred c---hHHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCcccccc
Q 044512 155 E---KDDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 155 ~---~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~ 227 (230)
+ ..++++.|.+.|++.||+|+|++|+++++++..+++++++++++||+||||+|+|||++++++|+++++|.+
T Consensus 195 ~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~ 270 (306)
T 2abq_A 195 SIEDAIPHVQRLIGEGIESILVSFAGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKSLEDAVP 270 (306)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECGGGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCceEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 3 234667888889999999999999999988888899999999999999999999999999999999999865
No 45
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.98 E-value=3.7e-32 Score=219.84 Aligned_cols=207 Identities=15% Similarity=0.148 Sum_probs=163.5
Q ss_pred CCCCCChhHHHHHHHHHHCC--CCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCc------cccc
Q 044512 1 MQFGDDEFGHMLVNILKQNN--VKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNM------GLIK 72 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~g--i~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~l~ 72 (230)
++||+| +|+.+++.|++.| |+++++.... .|++++++++++|++.+.+.. .++. +.+++++. ..+.
T Consensus 72 ~~vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~--~t~~~~~~v~~~g~~~~~~~~-~g~~--l~~~~~~~~~~~~~~~~~ 145 (331)
T 2ajr_A 72 GFVGGY-MGKILVEELRKISKLITTNFVYVEG--ETRENIEIIDEKNKTITAINF-PGPD--VTDMDVNHFLRRYKMTLS 145 (331)
T ss_dssp EEEEHH-HHHHHHHHHHHHCTTEEEEEEEESS--CCEEEEEEEETTTTEEEEEEC-CCCC--CCHHHHHHHHHHHHHHHT
T ss_pred EEecCc-hHHHHHHHHHHcCCccceEEEEcCC--CCeEEEEEEeCCCceEEEEeC-CCCC--CCHHHHHHHHHHHHHhcc
Confidence 468998 9999999999999 9999887654 477777777777887333432 3332 44443321 2467
Q ss_pred cccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhh---CcEEeeCHHH-Hhhh
Q 044512 73 QAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNH---ADLIKVSDDE-VNFL 148 (230)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~---~dil~~n~~E-~~~l 148 (230)
+++++|+++. +..+.+.+.+.++++.+++.+.++++||+. +.+.+++++ +|++++|++| +..|
T Consensus 146 ~~~~v~~~g~-~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~------------~~~~~~l~~~~~~dil~~N~~E~~~~l 212 (331)
T 2ajr_A 146 KVDCVVISGS-IPPGVNEGICNELVRLARERGVFVFVEQTP------------RLLERIYEGPEFPNVVKPDLRGNHASF 212 (331)
T ss_dssp TCSEEEEESC-CCTTSCTTHHHHHHHHHHHTTCEEEEECCH------------HHHHHHHHSSCCCSEECCCCTTCCSCB
T ss_pred cCCEEEEECC-CCCCCCHHHHHHHHHHHHHcCCEEEEECCh------------HHHHHHHhcCCCCeEEEeCccchHHHH
Confidence 8999999875 333344578889999999999999999972 235566654 9999999999 9999
Q ss_pred cCCCCcc---hHHHHHHHHhcCccEEEEEecCCceEEEecCceeeec-CccccccCCCCcchHHHHHHHHHHH-cCCCcc
Q 044512 149 TKGGDAE---KDDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVP-GFSVKTIDTTGAGDAFVGSFLVSVA-KDANIF 223 (230)
Q Consensus 149 ~~~~~~~---~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~-~~~~~~~dt~GaGDaf~ag~~~~l~-~g~~~~ 223 (230)
+|....+ ..++++.|.+. ++.||||+|++|+++++++..++++ +++++++||+||||+|+|||+++|+ +|++++
T Consensus 213 ~g~~~~~~~~~~~~~~~l~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~~~g~~~~ 291 (331)
T 2ajr_A 213 LGVDLKTFDDYVKLAEKLAEK-SQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGANFL 291 (331)
T ss_dssp TTBCCCSHHHHHHHHHHHHHH-SSEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHHCSCHH
T ss_pred hCCCCCCHHHHHHHHHHHHHh-cCEEEEeecCCceEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHHHcCCCHH
Confidence 8876433 23466777777 8999999999999999888888899 8889999999999999999999999 999999
Q ss_pred cccc
Q 044512 224 NVKF 227 (230)
Q Consensus 224 ~a~~ 227 (230)
+|.+
T Consensus 292 ~al~ 295 (331)
T 2ajr_A 292 EMAK 295 (331)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9865
No 46
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.98 E-value=1.1e-31 Score=216.28 Aligned_cols=207 Identities=17% Similarity=0.166 Sum_probs=162.4
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCc------cccccc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNM------GLIKQA 74 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~l~~~ 74 (230)
++||+ .+|+.+++.|++.||+++++.... .|++++++++++ +++.... .++ .+++++++. ..++++
T Consensus 59 ~~vG~-~~G~~i~~~L~~~gV~~~~v~~~~--~t~~~~~~~~~~-~~~~~~~--~g~--~l~~~~~~~~~~~~~~~~~~~ 130 (323)
T 2f02_A 59 GVLGG-FHGAFIANELKKANIPQAFTSIKE--ETRDSIAILHEG-NQTEILE--AGP--TVSPEEISNFLENFDQLIKQA 130 (323)
T ss_dssp EEEEH-HHHHHHHHHHHHTTCCBCCEEESS--CCEEEEEEEETT-EEEEEEE--CCC--BCCHHHHHHHHHHHHHHHTTC
T ss_pred EEecc-chHHHHHHHHHHCCCceeEEEcCC--CCeeEEEEEcCC-CeEEEEC--CCC--CCCHHHHHHHHHHHHHhccCC
Confidence 46896 599999999999999999987654 366777777665 5554333 232 244443321 245789
Q ss_pred cEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHh---hhCcEEeeCHHHHhhhcCC
Q 044512 75 KIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIW---NHADLIKVSDDEVNFLTKG 151 (230)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l---~~~dil~~n~~E~~~l~~~ 151 (230)
+++++++... ...+.+.+.++++.+++.+.++++||+. +.+.+++ +++|++++|++|+..|+|.
T Consensus 131 ~~v~~~g~~~-~~~~~~~~~~~~~~a~~~g~~v~~Dp~~------------~~~~~~l~~~~~~dil~~N~~E~~~l~g~ 197 (323)
T 2f02_A 131 EIVTISGSLA-KGLPSDFYQELVQKAHAQEVKVLLDTSG------------DSLRQVLQGPWKPYLIKPNLEELEGLLGQ 197 (323)
T ss_dssp SEEEEESCCC-BTSCTTHHHHHHHHHHHTTCEEEEECCT------------HHHHHHHHSSCCCSEECCBHHHHHHHHTC
T ss_pred CEEEEECCCC-CCCChHHHHHHHHHHHHCCCEEEEECCh------------HHHHHHHhccCCCeEEecCHHHHHHHhCC
Confidence 9999987533 3334567888999999999999999973 2345555 4899999999999999987
Q ss_pred CCc-----chHHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCccccc
Q 044512 152 GDA-----EKDDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVK 226 (230)
Q Consensus 152 ~~~-----~~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~ 226 (230)
... +..++++.|.+.|++.||||+|++|+++++++..+++++++++++||+||||+|+|||+++|++|+++++|.
T Consensus 198 ~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~~~~a~ 277 (323)
T 2f02_A 198 DFSENPLAAVQTALTKPMFAGIEWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAPAAELL 277 (323)
T ss_dssp CCCSSCHHHHHHHHTSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHHcCCCHHHHH
Confidence 632 233566778888999999999999999998888889999999999999999999999999999999999987
Q ss_pred cc
Q 044512 227 FR 228 (230)
Q Consensus 227 ~~ 228 (230)
++
T Consensus 278 ~~ 279 (323)
T 2f02_A 278 KW 279 (323)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 47
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.97 E-value=2.5e-31 Score=212.72 Aligned_cols=206 Identities=17% Similarity=0.203 Sum_probs=161.5
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCc--c-c--ccccc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNM--G-L--IKQAK 75 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~-~--l~~~~ 75 (230)
++||+ .+|+.+++.|++.||+++++.... .|+.++++ ++|+++.... .++. +.+++++. . . +++++
T Consensus 57 ~~vG~-~~g~~i~~~l~~~gv~~~~v~~~~--~t~~~~~~--~~g~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~~ 127 (306)
T 2jg5_A 57 GFAGG-FPGKFIIDTLNNSAIQSNFIEVDE--DTRINVKL--KTGQETEINA--PGPH--ITSTQFEQLLQQIKNTTSED 127 (306)
T ss_dssp EEECH-HHHHHHHHHHHHTTCEECCEECSS--CCEEEEEE--ESSSEEEEEC--CCCC--CCHHHHHHHHHHHTTCCTTC
T ss_pred EEecC-cchHHHHHHHHHCCCceeEEEcCC--CCeEEEEE--cCCCEEEEEC--CCCC--CCHHHHHHHHHHHHhccCCC
Confidence 46898 699999999999999999987643 36666655 5677754433 2322 34333321 1 1 57899
Q ss_pred EEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh-hCcEEeeCHHHHhhhcCCCCc
Q 044512 76 IFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWN-HADLIKVSDDEVNFLTKGGDA 154 (230)
Q Consensus 76 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dil~~n~~E~~~l~~~~~~ 154 (230)
++|+++.. ....+.+.+.++++.+++.+.++++||+. ..+.++++ ++|++++|++|+..|+|....
T Consensus 128 ~v~~~g~~-~~~~~~~~~~~~~~~a~~~g~~v~~D~~~------------~~~~~~l~~~~dil~~N~~E~~~l~g~~~~ 194 (306)
T 2jg5_A 128 IVIVAGSV-PSSIPSDAYAQIAQITAQTGAKLVVDAEK------------ELAESVLPYHPLFIKPNKDELEVMFNTTVN 194 (306)
T ss_dssp EEEEESCC-CTTSCTTHHHHHHHHHHHHCCEEEEECCH------------HHHHHHGGGCCSEECCBHHHHHHHTTSCCC
T ss_pred EEEEeCCC-CCCCChHHHHHHHHHHHHCCCEEEEECCh------------HHHHHHHhcCCeEEecCHHHHHHHhCCCCC
Confidence 99998753 33344567788899999999999999972 34566777 699999999999999987643
Q ss_pred ch---HHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCccccccc
Q 044512 155 EK---DDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKFR 228 (230)
Q Consensus 155 ~~---~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 228 (230)
+. .++++.|.+.|++.|++|+|++|+++++++..+++++++++++||+||||+|+|||++++++|+++++|.++
T Consensus 195 ~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~ 271 (306)
T 2jg5_A 195 SDADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQ 271 (306)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECGGGCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCceEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 32 356777888899999999999999999888888999999999999999999999999999999999998753
No 48
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.97 E-value=7e-32 Score=215.84 Aligned_cols=192 Identities=15% Similarity=0.221 Sum_probs=152.6
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEEc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHYG 80 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 80 (230)
++||+| +|+.+++.|++.||+++++...++.+|+.+++++++ |++++..+. +++..+. +++. ++++++|++
T Consensus 77 ~~vG~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~~--ga~~~~~-~~l~----~~~~~v~~~ 147 (306)
T 3bf5_A 77 SAVGMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDG-KKQVSFMHQ--GAMAAWA-PQLA----DEYEYVHFS 147 (306)
T ss_dssp EEEETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECS-SCEEEEEEC--THHHHCC-CCCC----SCEEEEEEC
T ss_pred EEEeCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcC-CeeEEEEeC--Chhhhhh-Hhhc----CCCCEEEEC
Confidence 468999 999999999999999999877777789999999987 888887763 4444444 3332 688999998
Q ss_pred cccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHHHH
Q 044512 81 SISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDDVV 160 (230)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~ 160 (230)
+.. ...++++.+++ ++++||+.+...|. .+.+.++++++|++++|++|+..|++....+..
T Consensus 148 ~~~--------~~~~~~~~a~~---~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~--- 208 (306)
T 3bf5_A 148 TGP--------NYLDMAKSIRS---KIIFDPSQEIHKYS-----KDELKKFHEISYMSIFNDHEYRVFREMTGLSSP--- 208 (306)
T ss_dssp SSS--------SHHHHHHHCCS---EEEECCGGGGGGSC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC---
T ss_pred ChH--------HHHHHHHHhCC---cEEEcCchhhhhcc-----HHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc---
Confidence 753 34566666554 89999985322121 456778899999999999999999875433211
Q ss_pred HHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCccccccc
Q 044512 161 MSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNVKFR 228 (230)
Q Consensus 161 ~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 228 (230)
.+ .||||+|++|+++++++..+++++++++ +||+||||+|+|||++++++|+++++|.++
T Consensus 209 -~l------~vvvT~G~~Ga~~~~~~~~~~~~~~~v~-vDttGAGDaF~ag~~~~l~~g~~~~~a~~~ 268 (306)
T 3bf5_A 209 -KV------TTIVTNGERGSSLFMDGKKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNRRSIEKGMIY 268 (306)
T ss_dssp -SS------CEEEEEGGGEEEEEETTEEEEEECCCCC-SCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred -cE------EEEEeecccCeEEEeCCcEEEecCCcCC-CCCCCccHHHHHHHHHHHHcCCCHHHHHHH
Confidence 11 1999999999999988888899999999 999999999999999999999999998753
No 49
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.97 E-value=4.7e-30 Score=205.96 Aligned_cols=208 Identities=20% Similarity=0.285 Sum_probs=158.2
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEE--EecCCeeeEEEecCCCccccccccccCccccccccEEE
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVT--LKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFH 78 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 78 (230)
++||+| +|+.+++.|+++||+++++.+.++.+|....-. .+.++++++... .+....+.+. ..+.+++++++|
T Consensus 50 g~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~v~ 124 (313)
T 3kd6_A 50 GVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQ--LNVFAEFDPH--VPQYYRDSKFVC 124 (313)
T ss_dssp EEEETT-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEE--CGGGTTCCCC--CCGGGTTCSEEE
T ss_pred EecCCC-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecc--cchHhhcCcc--chHHHccCCEEE
Confidence 468999 999999999999999999988776677332111 222344444432 2222233321 235678999999
Q ss_pred EccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcchHH
Q 044512 79 YGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAEKDD 158 (230)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~ 158 (230)
++++. .+...++++.+ +.+.++++||.+ +|. +...+.+.++++++|++++|++|++.|+|... ..+
T Consensus 125 ~~~~~------~~~~~~~~~~~-~~~~~v~~Dp~~---~~~--~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~--~~~ 190 (313)
T 3kd6_A 125 LGNID------PELQLKVLDQI-DDPKLVVCDTMN---FWI--EGKPEELKKVLARVDVFIVNDSEARLLSGDPN--LVK 190 (313)
T ss_dssp ECSSC------HHHHHHHHTTC-SSCSEEEEECCH---HHH--HHCHHHHHHHHTTCSEEEEEHHHHHHHHSCSC--HHH
T ss_pred EcCCC------HHHHHHHHHHH-hhCCEEEEcChh---hhh--hhhHHHHHHHHhcCCEEEeCHHHHHHHhCCCC--HHH
Confidence 97742 24455666666 567889999942 221 23356778899999999999999999998653 456
Q ss_pred HHHHHHhcCccEEEEEecCCceEEEecCceeeecCccc-cccCCCCcchHHHHHHHHHHHcCC-----Ccccccc
Q 044512 159 VVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSV-KTIDTTGAGDAFVGSFLVSVAKDA-----NIFNVKF 227 (230)
Q Consensus 159 ~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~-~~~dt~GaGDaf~ag~~~~l~~g~-----~~~~a~~ 227 (230)
+++.|++.|++.||||+|++|+++++++..++++++++ +++||+||||+|+|||+++|++|+ ++++|.+
T Consensus 191 ~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~~~l~~a~~ 265 (313)
T 3kd6_A 191 TARIIREMGPKTLIIKKGEHGALLFTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGNTSEAEMRKAVL 265 (313)
T ss_dssp HHHHHHTTSCSEEEEECTTSCEEEEETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeeCCCcEEEEECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHHcCCCccccCHHHHHH
Confidence 88889999999999999999999999998899999998 799999999999999999999998 6777654
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.97 E-value=2e-30 Score=206.79 Aligned_cols=202 Identities=18% Similarity=0.131 Sum_probs=153.7
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCccccccccEEEEc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNMGLIKQAKIFHYG 80 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 80 (230)
++||+|. +.+++.|++.||+++++.. +.+|++..++ +++|++++..+. ++...++++++.. ..++++|++
T Consensus 57 ~~vG~D~--~~~~~~L~~~gVd~~~v~~--~~~t~~~~i~-~~~g~~~~~~~~--~~~~~l~~~~~~~---~~~~~v~~~ 126 (298)
T 1vk4_A 57 TKCTRED--VSKFSFLRDNGVEVVFLKS--PRTTSIENRY-GSDPDTRESFLI--SAADPFTESDLAF---IEGEAVHIN 126 (298)
T ss_dssp EEECTTT--GGGGTTTGGGTCEEEEEEC--SSCEEEEEEC------CCEEEEE--ECCCCCCGGGGGG---CCSSEEEEC
T ss_pred EEEcCCH--HHHHHHHHHcCCceEEEec--CCCcEEEEEE-cCCCCeeEEEec--cccccCCHHHcCc---CCCCEEEEC
Confidence 4689997 7889999999999998763 3467766655 456777666543 3344555555432 578999998
Q ss_pred cccccCchHHHHHHHHHHHHHHCCCeEEEeCCCC----------CCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcC
Q 044512 81 SISLISEPCRSAHMAALKAAKDAGVLLSYDPNVR----------LPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTK 150 (230)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~----------~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~ 150 (230)
++.. .+. ..++++.+++.+.++++||+.. ...| +.+.++++++|++++|++|+..|+|
T Consensus 127 ~~~~-~~~----~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~dil~~N~~E~~~l~g 194 (298)
T 1vk4_A 127 PLWY-GEF----PEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDW-------EMKEKYLKYLDLFKVDSREAETLTG 194 (298)
T ss_dssp CSST-TSS----CGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCC-------TTHHHHGGGCSEEEEEHHHHHHHHS
T ss_pred Cccc-ccc----cHHHHHHHHHcCCEEEEecCccccccccccccccch-------HHHHhhcccCCEEecCHHHHHHHhC
Confidence 8633 222 2356667777899999999721 1112 2356789999999999999999998
Q ss_pred CCCcchHHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHc-CCCccccccc
Q 044512 151 GGDAEKDDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAK-DANIFNVKFR 228 (230)
Q Consensus 151 ~~~~~~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~-g~~~~~a~~~ 228 (230)
.. +.+++++.|.+.|++.||||+ ++|++++++ ..+++++++++++||+||||+|+|||+++|++ |+++++|.++
T Consensus 195 ~~--~~~~~~~~l~~~g~~~vvvT~-~~G~~~~~~-~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~~g~~~~~a~~~ 269 (298)
T 1vk4_A 195 TN--DLRESCRIIRSFGAKIILATH-ASGVIVFDG-NFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKF 269 (298)
T ss_dssp CS--CHHHHHHHHHHTTCSSEEEEE-TTEEEEESS-SEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred CC--CHHHHHHHHHhcCCCEEEEEc-CCCcEEEeC-CEEEeccCCcccCCCcCccHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 76 345678888889999999999 999999877 77889988899999999999999999999999 9999998753
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.93 E-value=3.5e-26 Score=183.35 Aligned_cols=201 Identities=15% Similarity=0.095 Sum_probs=143.4
Q ss_pred CCCCCChhHHHHHHHHHHCCCCccceEec--CCCcceEEEEEEecCCeeeEEEecCCCccccccccccCc--c-----cc
Q 044512 1 MQFGDDEFGHMLVNILKQNNVKTEGVCFD--NHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNM--G-----LI 71 (230)
Q Consensus 1 t~vG~D~~g~~i~~~l~~~gi~~~~i~~~--~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~-----~l 71 (230)
++||+|. |+.+ |+++||+++++... .+ +|++.+ . .| ..++++++.. + .+
T Consensus 17 g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~-~t~~~~--~--~g-------------~~l~~~~i~~~~~~~~~~~~ 74 (312)
T 2yxt_A 17 GYVGNRA-ATFP---LQVLGFEIDAVNSVQFSN-HTGYAH--W--KG-------------QVLNSDELQELYEGLRLNNM 74 (312)
T ss_dssp SCSTHHH-HHHH---HHHTTCEEEEEEEEEESS-CTTSSC--C--CE-------------EECCHHHHHHHHHHHHHTTC
T ss_pred CccchHh-hHHH---HHHcCCeEEEEEEEEecC-CCCcCC--c--cC-------------ccCCHHHHHHHHHHHHhcCC
Confidence 4799998 9998 99999999988653 22 343322 0 11 1122233221 1 15
Q ss_pred ccccEEEEccccccCchHHHHHHHHHHHHHHCCC--eEEEeCCCCCC------CCCCHHHHHHHHHH-HhhhCcEEeeCH
Q 044512 72 KQAKIFHYGSISLISEPCRSAHMAALKAAKDAGV--LLSYDPNVRLP------LWPSQDAARDGIKS-IWNHADLIKVSD 142 (230)
Q Consensus 72 ~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~d~~~~~~------~~~~~~~~~~~~~~-~l~~~dil~~n~ 142 (230)
.++++++++.+ ......+.+.++++.+++.|. ++++||..+.. +|. ++...+.+.+ +++++|++++|+
T Consensus 75 ~~~~~v~~G~~--~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~-~~~~~~~l~~~ll~~~dil~pN~ 151 (312)
T 2yxt_A 75 NKYDYVLTGYT--RDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYV-PEDLLPVYKEKVVPLADIITPNQ 151 (312)
T ss_dssp CCCSEEEECCC--CCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESS-CTTHHHHHHHTTGGGCSEECCCH
T ss_pred ccCCEEEECCC--CCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeC-CHHHHHHHHHHhhhhCCEEcCCH
Confidence 67899886543 344446677788888888775 48899986533 342 2234556665 899999999999
Q ss_pred HHHhhhcCCCCcc---hHHHHHHHHhcCccEEEEEecCCc------eEEE-------ec-C----ceeeecCccccccCC
Q 044512 143 DEVNFLTKGGDAE---KDDVVMSLWHDNLKLLLVTYGAKG------CGYF-------TK-K----FKGRVPGFSVKTIDT 201 (230)
Q Consensus 143 ~E~~~l~~~~~~~---~~~~~~~l~~~g~~~vvvt~g~~g------~~~~-------~~-~----~~~~~~~~~~~~~dt 201 (230)
.|++.|+|....+ ..++++.|++.|++.||||+|+.| ++++ ++ + ..++++++++++ ||
T Consensus 152 ~Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v-dt 230 (312)
T 2yxt_A 152 FEAELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVDA-VF 230 (312)
T ss_dssp HHHHHHHSCCCCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECCSS-CC
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeecccCC-CC
Confidence 9999999976433 345677888899999999988764 6665 43 2 567888888887 99
Q ss_pred CCcchHHHHHHHHHHHc-CCCcccccc
Q 044512 202 TGAGDAFVGSFLVSVAK-DANIFNVKF 227 (230)
Q Consensus 202 ~GaGDaf~ag~~~~l~~-g~~~~~a~~ 227 (230)
+||||+|+|||+++|++ |+++++|.+
T Consensus 231 tGAGDaf~a~~~~~l~~~g~~l~~a~~ 257 (312)
T 2yxt_A 231 VGTGDLFAAMLLAWTHKHPNNLKVACE 257 (312)
T ss_dssp SSHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred CCchHHHHHHHHHHHHhcCCCHHHHHH
Confidence 99999999999999999 999999865
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.93 E-value=7.4e-26 Score=179.07 Aligned_cols=203 Identities=18% Similarity=0.157 Sum_probs=144.1
Q ss_pred CCCCChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCccccccccccCc------c--cccc
Q 044512 2 QFGDDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLKDSELNM------G--LIKQ 73 (230)
Q Consensus 2 ~vG~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~--~l~~ 73 (230)
.+|.| ..+..|++.||++.++.. .+ ..+..|.+.+.. ..+..+++.. + .+++
T Consensus 29 ~~G~d----~~~~~l~~~Gv~~~~v~t--------~i-~~~~~g~~~~~g-------~~~~~~~~~~~~~~l~~~~~~~~ 88 (283)
T 2ddm_A 29 SVGNS----IAVPAIKQNGLNVFAVPT--------VL-LSNTPHYDTFYG-------GAIPDEWFSGYLRALQERDALRQ 88 (283)
T ss_dssp SSTHH----HHHHHHHHTTCCEEEEEE--------EE-ESSCTTSSCCCE-------EECCHHHHHHHHHHHHHTTCCTT
T ss_pred cchHH----HHHHHHHHcCCeeeEEeE--------EE-eccCCCcCceee-------eeCCHHHHHHHHHHHHhcCCccc
Confidence 46666 356799999999987743 12 224445444111 1122222210 1 4567
Q ss_pred ccEEEEccccccCchHHHHHHHHHHHHHH--CCCeEEEeCCCCC---CCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhh
Q 044512 74 AKIFHYGSISLISEPCRSAHMAALKAAKD--AGVLLSYDPNVRL---PLWPSQDAARDGIKSIWNHADLIKVSDDEVNFL 148 (230)
Q Consensus 74 ~~~v~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~d~~~~~---~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l 148 (230)
+++++++.+ ......+.+.++++.+++ .+.++++||..+. ..|...........++++++|++++|+.|++.|
T Consensus 89 ~~~v~~G~l--~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~~L 166 (283)
T 2ddm_A 89 LRAVTTGYM--GTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEIL 166 (283)
T ss_dssp CCEEEECCC--SCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHHHH
T ss_pred CCEEEECCc--CCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHHHH
Confidence 899998764 233456778888888887 7899999998653 344322222333346889999999999999999
Q ss_pred cCCCCcc---hHHHHHHHHhcCccEEEEEecCC-------ceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHc
Q 044512 149 TKGGDAE---KDDVVMSLWHDNLKLLLVTYGAK-------GCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAK 218 (230)
Q Consensus 149 ~~~~~~~---~~~~~~~l~~~g~~~vvvt~g~~-------g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~ 218 (230)
+|....+ ..++++.|.+.|++.||+|.|++ |+++++++..++++++++. +||+||||+|+|+|++++++
T Consensus 167 ~g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~-vdt~GAGDaf~a~~~~~l~~ 245 (283)
T 2ddm_A 167 TGKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVK-TDLKGTGDLFCAQLISGLLK 245 (283)
T ss_dssp HTSCCSSHHHHHHHHHHHCCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECCC-CCCCCHHHHHHHHHHHHHHT
T ss_pred hCCCCCCHHHHHHHHHHHHHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeeceeC-CCCCChHHHHHHHHHHHHHc
Confidence 9976433 23566778888999999999999 8888888777888888776 89999999999999999999
Q ss_pred CCCcccccc
Q 044512 219 DANIFNVKF 227 (230)
Q Consensus 219 g~~~~~a~~ 227 (230)
|+++++|.+
T Consensus 246 g~~~~~A~~ 254 (283)
T 2ddm_A 246 GKALTDAVH 254 (283)
T ss_dssp TCCHHHHHH
T ss_pred CCCHHHHHH
Confidence 999999865
No 53
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.88 E-value=6.2e-22 Score=154.47 Aligned_cols=148 Identities=20% Similarity=0.130 Sum_probs=114.4
Q ss_pred cccEEEEccccccCchHHHHHHHHHHHHHHCC-CeEEEeCCCCCC----CCCCHHHHHHHH-HHHhhhCcEEeeCHHHHh
Q 044512 73 QAKIFHYGSISLISEPCRSAHMAALKAAKDAG-VLLSYDPNVRLP----LWPSQDAARDGI-KSIWNHADLIKVSDDEVN 146 (230)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~d~~~~~~----~~~~~~~~~~~~-~~~l~~~dil~~n~~E~~ 146 (230)
+.+.++++. +. +.+.+..+++.+++.+ .++++||..+.. +|. ....+.+ .++++++|+++||+.|++
T Consensus 70 ~~~~v~~G~--l~---~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~--~~~~~~~~~~ll~~~dil~pN~~E~~ 142 (258)
T 1ub0_A 70 PLHAAKTGA--LG---DAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLA--KEAAAALKERLFPLADLVTPNRLEAE 142 (258)
T ss_dssp CCSEEEECC--CC---SHHHHHHHHHHHHHTTCCSEEECCCC---------C--HHHHHHHHHHTGGGCSEECCBHHHHH
T ss_pred CCCEEEECC--cC---CHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccC--hHHHHHHHHhhcccCeEEeCCHHHHH
Confidence 467777754 22 3356777788888888 899999986543 443 1223344 468899999999999999
Q ss_pred hhcCCCCcc---hHHHHHHHHhcCccEEEEEecCC-c----eEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHc
Q 044512 147 FLTKGGDAE---KDDVVMSLWHDNLKLLLVTYGAK-G----CGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAK 218 (230)
Q Consensus 147 ~l~~~~~~~---~~~~~~~l~~~g~~~vvvt~g~~-g----~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~ 218 (230)
.|+|....+ ..++++.|.+.|++.|++|.|++ | +++++++..+++++++++++||+||||+|+|+|++++++
T Consensus 143 ~L~g~~~~~~~~~~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 222 (258)
T 1ub0_A 143 ALLGRPIRTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAK 222 (258)
T ss_dssp HHHCSCCCSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred HHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 999976543 23566778888999999999998 8 777777778888888889999999999999999999999
Q ss_pred CCCcccccc
Q 044512 219 DANIFNVKF 227 (230)
Q Consensus 219 g~~~~~a~~ 227 (230)
|+++++|.+
T Consensus 223 g~~~~~a~~ 231 (258)
T 1ub0_A 223 GRPLAEAVA 231 (258)
T ss_dssp TCCHHHHHH
T ss_pred CCCHHHHHH
Confidence 999999875
No 54
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.88 E-value=7.2e-22 Score=156.47 Aligned_cols=147 Identities=15% Similarity=0.079 Sum_probs=111.8
Q ss_pred ccEEEEccccccCchHHHHHHHHHHHHHHCCCe-EEEeCCCCC----CCCCCHHHHHHHHHH-HhhhCcEEeeCHHHHhh
Q 044512 74 AKIFHYGSISLISEPCRSAHMAALKAAKDAGVL-LSYDPNVRL----PLWPSQDAARDGIKS-IWNHADLIKVSDDEVNF 147 (230)
Q Consensus 74 ~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~d~~~~~----~~~~~~~~~~~~~~~-~l~~~dil~~n~~E~~~ 147 (230)
+++++++.+ . +.+.+..+++.+++.+.+ +++||..+. .+|. ....+.+.+ +++++|+++||+.|+..
T Consensus 95 ~~~v~~G~l--~---~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~--~~~~~~l~~~ll~~~dil~pN~~Ea~~ 167 (288)
T 1jxh_A 95 IDTTKIGML--A---ETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLS--PSAIETLRVRLLPQVSLITPNLPEAAA 167 (288)
T ss_dssp CSEEEECCC--C---SHHHHHHHHHHHHHTTCCSEEEECCCC------CCC--HHHHHHHHHHTGGGCSEEECBHHHHHH
T ss_pred CCEEEECCC--C---CHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCC--HHHHHHHHHHHHhhCcEEcCCHHHHHH
Confidence 688877653 2 457788888889998886 999998653 2443 223344554 78999999999999999
Q ss_pred hcCC-CCcc---hHHHHHHHHhcCccEEEEEecCCc-----eEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHc
Q 044512 148 LTKG-GDAE---KDDVVMSLWHDNLKLLLVTYGAKG-----CGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAK 218 (230)
Q Consensus 148 l~~~-~~~~---~~~~~~~l~~~g~~~vvvt~g~~g-----~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~ 218 (230)
|+|. ...+ ..++++.|.+.|++.||+|.|++| +++++++..++++.++++++||+||||+|+|+|+++|++
T Consensus 168 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~vdttGAGD~f~a~~~a~l~~ 247 (288)
T 1jxh_A 168 LLDAPHARTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPR 247 (288)
T ss_dssp HHTCCCCCSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGG
T ss_pred HcCCCCCCCHHHHHHHHHHHHHhCCCEEEEeccCCCCCceeEEEEECCeEEEEeccccCCCCCCCchHHHHHHHHHHHHc
Confidence 9997 4433 235677888899999999999999 888887778888888889999999999999999999999
Q ss_pred CCCcccccc
Q 044512 219 DANIFNVKF 227 (230)
Q Consensus 219 g~~~~~a~~ 227 (230)
|+++++|++
T Consensus 248 g~~~~~A~~ 256 (288)
T 1jxh_A 248 HRSWGETVN 256 (288)
T ss_dssp SSSHHHHHH
T ss_pred CCCHHHHHH
Confidence 999999875
No 55
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.86 E-value=2.9e-21 Score=152.95 Aligned_cols=152 Identities=15% Similarity=0.105 Sum_probs=120.5
Q ss_pred cccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCC--CCC-CHHHHHHHHHHHhhhCcEEeeCHHHHhhhc
Q 044512 73 QAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLP--LWP-SQDAARDGIKSIWNHADLIKVSDDEVNFLT 149 (230)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--~~~-~~~~~~~~~~~~l~~~dil~~n~~E~~~l~ 149 (230)
+.+.+.++. +.+....+.+.++++.+++.+.++++||..+.. +|. ..++..+.+.++++++|+++||..|++.|+
T Consensus 77 ~~~aik~G~--l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~ 154 (291)
T 3mbh_A 77 QFDAIYTGY--LGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLL 154 (291)
T ss_dssp CCSEEEECC--CSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHH
T ss_pred ccCEEEECC--CCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHh
Confidence 678888864 445556678888888876678899999987643 453 235566677889999999999999999999
Q ss_pred CCCCc------chHHHHHHHHhcCccEEEEEecC-------CceEEEecC--ceeeecCccccccCCCCcchHHHHHHHH
Q 044512 150 KGGDA------EKDDVVMSLWHDNLKLLLVTYGA-------KGCGYFTKK--FKGRVPGFSVKTIDTTGAGDAFVGSFLV 214 (230)
Q Consensus 150 ~~~~~------~~~~~~~~l~~~g~~~vvvt~g~-------~g~~~~~~~--~~~~~~~~~~~~~dt~GaGDaf~ag~~~ 214 (230)
|.... +..++++.|++.|++.|++|.|. .|+++++++ ..++++.+++. +|++|+||+|+|+|++
T Consensus 155 g~~~~~~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~dt~GaGD~f~aai~a 233 (291)
T 3mbh_A 155 DEPYKADSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYLP-AHYPGTGDTFTSVITG 233 (291)
T ss_dssp TCCCCSCCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCCG-GGSTTHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecccC-CCCCChHHHHHHHHHH
Confidence 97642 23456788889999999999664 467777653 45677777775 8999999999999999
Q ss_pred HHHcCCCcccccc
Q 044512 215 SVAKDANIFNVKF 227 (230)
Q Consensus 215 ~l~~g~~~~~a~~ 227 (230)
+|++|+++++|.+
T Consensus 234 ~l~~g~~l~~A~~ 246 (291)
T 3mbh_A 234 SLMQGDSLPMALD 246 (291)
T ss_dssp HHHTTCCHHHHHH
T ss_pred HHHcCCCHHHHHH
Confidence 9999999999865
No 56
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.86 E-value=4.9e-21 Score=151.69 Aligned_cols=153 Identities=20% Similarity=0.090 Sum_probs=121.5
Q ss_pred cccccEEEEccccccCchHHHHHHHHHHHHHHCC--CeEEEeCCCC----CCCCCCHHHHHHHHHH-HhhhCcEEeeCHH
Q 044512 71 IKQAKIFHYGSISLISEPCRSAHMAALKAAKDAG--VLLSYDPNVR----LPLWPSQDAARDGIKS-IWNHADLIKVSDD 143 (230)
Q Consensus 71 l~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~d~~~~----~~~~~~~~~~~~~~~~-~l~~~dil~~n~~ 143 (230)
+.+.|++.++. +.+....+.+.++++.+++.+ .++++||... ..+|. +...+.+.+ +++++|+++||..
T Consensus 75 l~~~d~v~~G~--l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~--~~~~~~l~~~ll~~~diitpN~~ 150 (289)
T 3pzs_A 75 LKDCDAVLSGY--IGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVA--PGVAEFFCNEALPASDMIAPNLL 150 (289)
T ss_dssp GGGCCEEEECC--CSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSC--HHHHHHHHHTHHHHCSEECCCHH
T ss_pred ccCCCEEEECC--CCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccC--HHHHHHHHHHhhccCCEEeCCHH
Confidence 35788875553 556777788899999888766 7899998532 22443 444556664 8899999999999
Q ss_pred HHhhhcCCCCcch---HHHHHHHHhcCccEEEEEec-CCce-------EEEecCceeeecCccccc--cCCCCcchHHHH
Q 044512 144 EVNFLTKGGDAEK---DDVVMSLWHDNLKLLLVTYG-AKGC-------GYFTKKFKGRVPGFSVKT--IDTTGAGDAFVG 210 (230)
Q Consensus 144 E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~g-~~g~-------~~~~~~~~~~~~~~~~~~--~dt~GaGDaf~a 210 (230)
|++.|+|.+..+. .++++.|++.|++.|++|.| .+|+ ++.+++..++++.++++. +|++|+||+|+|
T Consensus 151 E~~~L~g~~~~~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dt~GaGD~f~a 230 (289)
T 3pzs_A 151 ELEQLSGERVENVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDFGKRQPVGVGDLTSG 230 (289)
T ss_dssp HHHHHHTSCCCSHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCCTTSCCTTHHHHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecCCCCCCCcHHHHHHH
Confidence 9999999875443 34678888899999999985 4776 777777788888887776 999999999999
Q ss_pred HHHHHHHcCCCcccccc
Q 044512 211 SFLVSVAKDANIFNVKF 227 (230)
Q Consensus 211 g~~~~l~~g~~~~~a~~ 227 (230)
+|++++++|+++++|.+
T Consensus 231 ~~~~~l~~g~~~~~A~~ 247 (289)
T 3pzs_A 231 LLLVNLLKGEPLDKALE 247 (289)
T ss_dssp HHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHCCCCHHHHHH
Confidence 99999999999999865
No 57
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.86 E-value=5.3e-21 Score=150.26 Aligned_cols=150 Identities=15% Similarity=0.085 Sum_probs=118.6
Q ss_pred cccEEEEccccccCchHHHHHHHHHHHHHHCCC-eEEEeCCCCCCCCCC--HHHHHHHHH-HHhhhCcEEeeCHHHHhhh
Q 044512 73 QAKIFHYGSISLISEPCRSAHMAALKAAKDAGV-LLSYDPNVRLPLWPS--QDAARDGIK-SIWNHADLIKVSDDEVNFL 148 (230)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~d~~~~~~~~~~--~~~~~~~~~-~~l~~~dil~~n~~E~~~l 148 (230)
+.++++++.+ .. .+....+++.+++.+. ++++||..+...+.. .+...+.+. ++++++|+++||..|+..|
T Consensus 74 ~~d~v~~G~l--~~---~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L 148 (271)
T 2i5b_A 74 GVDAMKTGML--PT---VDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQL 148 (271)
T ss_dssp CCSEEEECCC--CS---HHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECCC--CC---HHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHH
Confidence 6788888653 22 4677788888888888 699999876543321 122334554 7889999999999999999
Q ss_pred cCCC-Ccc---hHHHHHHHHhcCccEEEEEecC--Cce----EEEecCceeeecCccccccCCCCcchHHHHHHHHHHHc
Q 044512 149 TKGG-DAE---KDDVVMSLWHDNLKLLLVTYGA--KGC----GYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAK 218 (230)
Q Consensus 149 ~~~~-~~~---~~~~~~~l~~~g~~~vvvt~g~--~g~----~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~ 218 (230)
+|.. ..+ ..++++.|.+.|.+.||+|.|+ +|+ ++++++..++++.++++++||+||||+|+|+|++++++
T Consensus 149 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 228 (271)
T 2i5b_A 149 SGMDELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAK 228 (271)
T ss_dssp HTCCCCCSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTHHHHHHHHHHHHHHT
T ss_pred hCCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 9976 432 2356778888999999999998 784 66677778888888889999999999999999999999
Q ss_pred CCCcccccc
Q 044512 219 DANIFNVKF 227 (230)
Q Consensus 219 g~~~~~a~~ 227 (230)
|+++++|++
T Consensus 229 g~~~~~A~~ 237 (271)
T 2i5b_A 229 GAEVKEAIY 237 (271)
T ss_dssp TCCHHHHHH
T ss_pred CCCHHHHHH
Confidence 999999875
No 58
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.85 E-value=1.4e-20 Score=148.33 Aligned_cols=150 Identities=14% Similarity=0.105 Sum_probs=115.6
Q ss_pred cccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCC--CCCC-CHHHHHHHHHHHhhhCcEEeeCHHHHhhhc
Q 044512 73 QAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRL--PLWP-SQDAARDGIKSIWNHADLIKVSDDEVNFLT 149 (230)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~--~~~~-~~~~~~~~~~~~l~~~dil~~n~~E~~~l~ 149 (230)
+.|.+.++.+ .+....+.+.++++.. .+.++++||..+. .+|. ..++..+.+.++++++|+++||..|++.|+
T Consensus 74 ~~daik~G~l--~s~~~i~~v~~~l~~~--~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~ 149 (282)
T 3h74_A 74 HFDQALIGYV--GSVALCQQITTYLEQQ--TLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLT 149 (282)
T ss_dssp CCSEEEECCC--CSHHHHHHHHHHHHHS--CCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHH
T ss_pred ccCEEEECCC--CCHHHHHHHHHHHHHC--CCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHh
Confidence 6788888653 3433344444444332 3678999998763 3343 235566677889999999999999999999
Q ss_pred CCCCc---chHHHHHHHHh-cCc-cEEEEEecC----CceEEEe-cCceeeecCccccccCCCCcchHHHHHHHHHHHcC
Q 044512 150 KGGDA---EKDDVVMSLWH-DNL-KLLLVTYGA----KGCGYFT-KKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKD 219 (230)
Q Consensus 150 ~~~~~---~~~~~~~~l~~-~g~-~~vvvt~g~----~g~~~~~-~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g 219 (230)
|.+.. +..++++.|.+ .|+ +.|++|.|. .|+++++ ++..++++.+++. +|++|+||+|+|+|+++|++|
T Consensus 150 g~~~~~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v~-~dt~GaGD~fsaai~a~l~~g 228 (282)
T 3h74_A 150 GAPYQVTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRLP-GHYNGTGDTLAAVIAGLLGRG 228 (282)
T ss_dssp TCCCCSSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECCS-SCCTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCCC-CCCcCHHHHHHHHHHHHHHCC
Confidence 97643 44567888888 899 999999984 6888775 6677788877774 899999999999999999999
Q ss_pred CCcccccc
Q 044512 220 ANIFNVKF 227 (230)
Q Consensus 220 ~~~~~a~~ 227 (230)
+++++|.+
T Consensus 229 ~~l~~A~~ 236 (282)
T 3h74_A 229 YPLAPTLA 236 (282)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHHH
Confidence 99999865
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.84 E-value=3.2e-20 Score=147.42 Aligned_cols=151 Identities=12% Similarity=0.019 Sum_probs=113.7
Q ss_pred ccccEEEEccccccCchHHHHHHHHHHHHHHCC------CeEEEeCCCCC--CCCCCHHHHHHHHHHHhhhCcEEeeCHH
Q 044512 72 KQAKIFHYGSISLISEPCRSAHMAALKAAKDAG------VLLSYDPNVRL--PLWPSQDAARDGIKSIWNHADLIKVSDD 143 (230)
Q Consensus 72 ~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~d~~~~~--~~~~~~~~~~~~~~~~l~~~dil~~n~~ 143 (230)
.++|+|.++. +.+....+.+.++++..++.+ .++++||.... .+|. .+...+.+.++++++|+++||..
T Consensus 75 ~~~daV~tG~--l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~-~~~~~~~~~~Ll~~adiitPN~~ 151 (300)
T 3zs7_A 75 SNYRYILTGY--INNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYC-KKEVLDAYRELVPLADIVTPNYF 151 (300)
T ss_dssp GGCSEEEECC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC----------CTHHHHHHHHGGGCSEECCCHH
T ss_pred ccCCEEEECC--CCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeec-CHHHHHHHHHHhhhCCEecCCHH
Confidence 5788877754 566667788888888877654 78999996443 3554 34556677779999999999999
Q ss_pred HHhhhcCCCCcch---HHHHHHHHhcCccEEEEEecCCc-------eEEEec------CceeeecCccccccCCCCcchH
Q 044512 144 EVNFLTKGGDAEK---DDVVMSLWHDNLKLLLVTYGAKG-------CGYFTK------KFKGRVPGFSVKTIDTTGAGDA 207 (230)
Q Consensus 144 E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~g~~g-------~~~~~~------~~~~~~~~~~~~~~dt~GaGDa 207 (230)
|++.|+|.+..+. .++++.|++.|++.|+||.|+.| +++..+ +..++++.++++. |++|+||+
T Consensus 152 Ea~~L~g~~~~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~-~~~GtGD~ 230 (300)
T 3zs7_A 152 EASLLSGVTVNDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEG-RYTGTGDV 230 (300)
T ss_dssp HHHHHHSSCCCSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECCSS-CBTTHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccCCC-CCcCHHHH
Confidence 9999999876443 35678888899999999999987 333333 4667788877776 89999999
Q ss_pred HHHHHHHHHHcCCCcccccc
Q 044512 208 FVGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 208 f~ag~~~~l~~g~~~~~a~~ 227 (230)
|+|+|+++| +|+++++|.+
T Consensus 231 fsaal~a~l-~g~~~~~Av~ 249 (300)
T 3zs7_A 231 FAACLLAFS-HSHPMDVAIG 249 (300)
T ss_dssp HHHHHHHHH-TTSCHHHHHH
T ss_pred HHHHHHHHH-cCCCHHHHHH
Confidence 999999999 9999998764
No 60
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.71 E-value=7.9e-17 Score=137.71 Aligned_cols=150 Identities=15% Similarity=0.092 Sum_probs=112.5
Q ss_pred cccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCC----CCCCCHHHHHHHHH-HHhhhCcEEeeCHHHHhh
Q 044512 73 QAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRL----PLWPSQDAARDGIK-SIWNHADLIKVSDDEVNF 147 (230)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~----~~~~~~~~~~~~~~-~~l~~~dil~~n~~E~~~ 147 (230)
+.|.|.++.+ +....+.+.++++..++.+.++++||.... .++. +...+.+. ++++.+|+++||..|+..
T Consensus 91 ~~daIkiG~l---s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~--~~~~~~l~~~Ll~~a~iitPN~~Ea~~ 165 (550)
T 3rm5_A 91 KCNVIKTGML---TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAG--KDIVSLITEKVAPFADILTPNIPECYK 165 (550)
T ss_dssp CCSEEEECSC---CHHHHHHHHHHHHHHGGGSCEEEECCCC---------C--TTHHHHHHHHTGGGCSEECCBHHHHHH
T ss_pred CCCEEEECCC---CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCC--HHHHHHHHHHhhCcceEEecCHHHHHH
Confidence 6789988764 666667777777777666889999996432 2232 22344454 788999999999999999
Q ss_pred hcCCC--Cc---chHHHHHHHHhcCc-cEEEEEecCCc--------e--EEE--ecCceeeecCccccccCCCCcchHHH
Q 044512 148 LTKGG--DA---EKDDVVMSLWHDNL-KLLLVTYGAKG--------C--GYF--TKKFKGRVPGFSVKTIDTTGAGDAFV 209 (230)
Q Consensus 148 l~~~~--~~---~~~~~~~~l~~~g~-~~vvvt~g~~g--------~--~~~--~~~~~~~~~~~~~~~~dt~GaGDaf~ 209 (230)
|+|.. .. +..++++.|.+.+. +.||||.|..+ + +++ .++..++++.++++.+|++|+||+|+
T Consensus 166 L~g~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v~~~~t~GtGD~fs 245 (550)
T 3rm5_A 166 LLGEERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVNTTHTHGTGCTLA 245 (550)
T ss_dssp HHSCCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECCCCSCCBTHHHHHH
T ss_pred HhCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCcCCCCCcChhHHHH
Confidence 99974 22 23456778888776 79999998753 3 455 35567788888888899999999999
Q ss_pred HHHHHHHHcCCCcccccc
Q 044512 210 GSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 210 ag~~~~l~~g~~~~~a~~ 227 (230)
|+|++.|++|+++++|++
T Consensus 246 aaiaa~La~G~~l~eAv~ 263 (550)
T 3rm5_A 246 SAIASNLARGYSLPQSVY 263 (550)
T ss_dssp HHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHH
Confidence 999999999999999875
No 61
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.70 E-value=2.5e-16 Score=123.36 Aligned_cols=152 Identities=14% Similarity=0.043 Sum_probs=107.5
Q ss_pred cccccccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCcEEeeCHHHHh
Q 044512 69 GLIKQAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWN--HADLIKVSDDEVN 146 (230)
Q Consensus 69 ~~l~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~ 146 (230)
+.+..++++.+..-. ..+...+.+.++++.+++.+.++++||..... . ....+...++++ ++++++||..|+.
T Consensus 54 ~~~~~a~~lvi~~G~-~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~---~-~~~~~~~~~ll~~~~~~vitPN~~E~~ 128 (272)
T 1ekq_A 54 DMAKIAGALVLNIGT-LSKESVEAMIIAGKSANEHGVPVILDPVGAGA---T-PFRTESARDIIREVRLAAIRGNAAEIA 128 (272)
T ss_dssp HHHHHSSEEEEECTT-CCHHHHHHHHHHHHHHHHTTCCEEEECTTBTT---B-HHHHHHHHHHHHHSCCSEEEECHHHHH
T ss_pred HHHHhCCEEEEECCC-CCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCc---c-cchHHHHHHHHccCCCeEECCCHHHHH
Confidence 445678887773322 34455677888888888999999999974321 0 111233456676 8999999999999
Q ss_pred hhcCCC-C--------c---chHHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHH
Q 044512 147 FLTKGG-D--------A---EKDDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLV 214 (230)
Q Consensus 147 ~l~~~~-~--------~---~~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~ 214 (230)
.|+|.. . . +..++++.|.+.+...|++| |..+ ++.+++..++++.....+.|++|+||+|.|.+.+
T Consensus 129 ~L~g~~~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~-G~~~-~i~~~~~~~~~~~~~~~~~~ttGaGD~lag~iaa 206 (272)
T 1ekq_A 129 HTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAIT-GEVD-VIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGA 206 (272)
T ss_dssp HHCC---------------HHHHHHHHHHHHHHTSEEEEC-SSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHH
T ss_pred HHhCCCcccccCccCCCCHHHHHHHHHHHHHHcCCEEEEE-CCCC-EEEeCCEEEEEcCCCccccCccCchHHHHHHHHH
Confidence 999865 3 1 12345667766544455555 8877 5556667778887777788999999999988888
Q ss_pred HHHcCCCcccccc
Q 044512 215 SVAKDANIFNVKF 227 (230)
Q Consensus 215 ~l~~g~~~~~a~~ 227 (230)
.+.+|.++.+|++
T Consensus 207 ~la~g~~~~~A~~ 219 (272)
T 1ekq_A 207 FCAVEENPLFAAI 219 (272)
T ss_dssp HHTTCSSHHHHHH
T ss_pred HHhcCCCHHHHHH
Confidence 8888999999865
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.51 E-value=1.4e-13 Score=107.12 Aligned_cols=151 Identities=17% Similarity=0.042 Sum_probs=105.6
Q ss_pred cccccccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh-hCcEEeeCHHHHhh
Q 044512 69 GLIKQAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWN-HADLIKVSDDEVNF 147 (230)
Q Consensus 69 ~~l~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dil~~n~~E~~~ 147 (230)
+.++.++++.++.= +..+...+.+..+++.+++.+.|+++||..... .....+....+++ .+++++||..|+..
T Consensus 52 ~~~~~~dalvi~~G-~~~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~----~~~~~~~~~~ll~~~~~vITPN~~E~~~ 126 (265)
T 1v8a_A 52 EMIRLADAVVINIG-TLDSGWRRSMVKATEIANELGKPIVLDPVGAGA----TKFRTRVSLEILSRGVDVLKGNFGEISA 126 (265)
T ss_dssp HHHHHCSEEEEECT-TCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT----BHHHHHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHHCCEEEEEEC-CCCHHHHHHHHHHHHHHHHcCCcEEEcCccccc----cccCHHHHHHHHHhCCcEEcCCHHHHHH
Confidence 45678898877542 234434456677778888889999999975321 1111233344554 39999999999999
Q ss_pred hcCCCC------------cchHHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHH
Q 044512 148 LTKGGD------------AEKDDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVS 215 (230)
Q Consensus 148 l~~~~~------------~~~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~ 215 (230)
|+|... .+..++++.|.+.+...|++| |..+. +.+++..++++.......+++|+||+|.|.+.+.
T Consensus 127 L~g~~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~Vvlk-G~~d~-i~~~~~~~~~~~g~~~~~~~~GtGD~Lsg~iaa~ 204 (265)
T 1v8a_A 127 LLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAVDY-VSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAF 204 (265)
T ss_dssp HHHHHC----------CHHHHHHHHHHHHHHTTSEEEEE-SSSEE-EECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHH
T ss_pred HhCCcccccCcCcccccHHHHHHHHHHHHHHhCcEEEEc-CCCcE-EEcCCEEEEEcCCCcCcCCccChhHHHHHHHHHH
Confidence 988542 122345677777665577777 76664 4566677777776666779999999999999999
Q ss_pred HHcCCCcccccc
Q 044512 216 VAKDANIFNVKF 227 (230)
Q Consensus 216 l~~g~~~~~a~~ 227 (230)
+++|.+ .+|+.
T Consensus 205 lA~g~~-~~Aa~ 215 (265)
T 1v8a_A 205 VAVTEP-LKATT 215 (265)
T ss_dssp HTTSCH-HHHHH
T ss_pred HhcCCC-HHHHH
Confidence 999998 77653
No 63
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=99.36 E-value=4.6e-11 Score=92.78 Aligned_cols=153 Identities=12% Similarity=-0.027 Sum_probs=106.0
Q ss_pred ccccccccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHh-hhCcEEeeCHHHHh
Q 044512 68 MGLIKQAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIW-NHADLIKVSDDEVN 146 (230)
Q Consensus 68 ~~~l~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~dil~~n~~E~~ 146 (230)
.+..+.++.+.++.= ...+...+.+..+++.+++.+.|+++||..... + ....+....++ ..+++|+||..|+.
T Consensus 53 ~e~~~~a~alvIn~G-~l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~ga---s-~~r~~~~~~Ll~~~~~VItpN~~E~~ 127 (273)
T 3dzv_A 53 PQMFQQTSALVLNLG-HLSQEREQSLLAASDYARQVNKLTVVDLVGYGA---S-DIRNEVGEKLVHNQPTVVKGNLSEMR 127 (273)
T ss_dssp HHHHTTCSEEEEECC-SCCHHHHHHHHHHHHHHHHTTCCEEEECTTTTS---C-HHHHHHHHHHHHTCCSEEEEEHHHHH
T ss_pred HHHHHHCCeEEEecC-CCChHHHHHHHHHHHHHHHcCCcEEEchhhcCC---c-ccCHHHHHHHHhcCCcEECCCHHHHH
Confidence 356678888877753 334444567778888889999999999974322 1 11122223333 37899999999999
Q ss_pred hhcCCCCc-----------------chHHHHHHHHhcCc-cEEEEEecCCceEEEecCceeeecCccccccCCCCcchHH
Q 044512 147 FLTKGGDA-----------------EKDDVVMSLWHDNL-KLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAF 208 (230)
Q Consensus 147 ~l~~~~~~-----------------~~~~~~~~l~~~g~-~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf 208 (230)
.|+|.... +..++++.+.+... ..|++|.+. -++.+++..+.++......-.++|.||++
T Consensus 128 ~L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~~--D~i~dg~~~~~~~~G~~~~~~v~GtGc~L 205 (273)
T 3dzv_A 128 TFCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQ--DVLVSQEQVIVLQNGVPELDCFTGTGDLV 205 (273)
T ss_dssp HHTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESSS--EEEECSSCEEEECCCCGGGGSSTTHHHHH
T ss_pred HHhCCcccccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECCe--eEEEcCCEEEEeCCCCcccCCcCCchHHH
Confidence 99986531 11234566766554 677887532 34556666777766555566789999999
Q ss_pred HHHHHHHHHcCCCcccccc
Q 044512 209 VGSFLVSVAKDANIFNVKF 227 (230)
Q Consensus 209 ~ag~~~~l~~g~~~~~a~~ 227 (230)
.|.+.+.+++|.++.+|+.
T Consensus 206 s~~Iaa~lA~g~~~~~Aa~ 224 (273)
T 3dzv_A 206 GALVAALLGEGNAPMTAAV 224 (273)
T ss_dssp HHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHH
Confidence 9999999999999988864
No 64
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=99.20 E-value=3.8e-11 Score=95.35 Aligned_cols=140 Identities=15% Similarity=0.141 Sum_probs=88.0
Q ss_pred ccccccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHH---H-h-hhCcEEeeCHHH
Q 044512 70 LIKQAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKS---I-W-NHADLIKVSDDE 144 (230)
Q Consensus 70 ~l~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~---~-l-~~~dil~~n~~E 144 (230)
.++..+++.++.=...+....+.+.++++.++ .+.++++|++. ...+.. + + +.+++|+||..|
T Consensus 122 ~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g-----------~~ll~~~~~l~L~~~~~viTPN~~E 189 (311)
T 3bgk_A 122 QITAADVVLMGPGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGSA-----------INLLAKRKPAIWPTKQIILTPHQKE 189 (311)
T ss_dssp HHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTSEEEEETHH-----------HHHHHHCC-CCCSCSCEEEECCSCC
T ss_pred HhccCCEEEEcCCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCCh-----------hhhhccChhhcCCCCCEEECCcHHH
Confidence 34577888887421223333445555554433 47899999951 111111 1 3 468899999999
Q ss_pred HhhhcCCCCcch-----HHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHH-HHc
Q 044512 145 VNFLTKGGDAEK-----DDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVS-VAK 218 (230)
Q Consensus 145 ~~~l~~~~~~~~-----~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~-l~~ 218 (230)
+..|+|....+. .++++.|.+ + .+|+..| .+.++++ +..+++..+..+..+++|+||+| +|++++ +++
T Consensus 190 ~~~L~g~~~~~~~~d~~~~aa~~l~~-g--~~VvlkG-~~~~i~~-~~~~~~~~~~~~~~~t~GtGD~L-ag~iaa~lA~ 263 (311)
T 3bgk_A 190 WERLSGLTIPEQIEAATQTALAHFPK-E--TILVAKS-HQTKIYQ-GQKIGHIQVGGPYQATGGMGDTL-AGMIAGFVAQ 263 (311)
T ss_dssp -CTTTCCCSTTCCHHHHHHHHTTSCT-T--CEEEECS-SSCEEEE-TTEEEEECCCCGGGCSTTHHHHH-HHHHHHHHHH
T ss_pred HHHHhCCCCCcchhhHHHHHHHHHhc-C--CEEEEeC-CCeEEEE-CCEEEEECCCCCCCCCCcHHHHH-HHHHHHHHHc
Confidence 999999765432 234455555 4 3455455 4666666 43445566667788999999998 555555 569
Q ss_pred -CCCcccccc
Q 044512 219 -DANIFNVKF 227 (230)
Q Consensus 219 -g~~~~~a~~ 227 (230)
|.++.+|++
T Consensus 264 ~g~~~~eA~~ 273 (311)
T 3bgk_A 264 FHTDRFEVAA 273 (311)
T ss_dssp CCSCHHHHHH
T ss_pred cCCCHHHHHH
Confidence 999998864
No 65
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=99.16 E-value=2.8e-10 Score=90.29 Aligned_cols=139 Identities=12% Similarity=0.012 Sum_probs=87.2
Q ss_pred ccccccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHH---Hh--hhCcEEeeCHHH
Q 044512 70 LIKQAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKS---IW--NHADLIKVSDDE 144 (230)
Q Consensus 70 ~l~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~---~l--~~~dil~~n~~E 144 (230)
.++..+++.++.=...+....+.+.++++.++ .+.|+++|++. ...+.. ++ +.+++|+||..|
T Consensus 108 ~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g-----------~~ll~~~~~~l~~~~~~viTPN~~E 175 (310)
T 2r3b_A 108 VVEQADVILIGPGLGLDATAQQILKMVLAQHQ-KQQWLIIDGSA-----------ITLFSQGNFSLTYPEKVVFTPHQME 175 (310)
T ss_dssp HHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTCEEEEETHH-----------HHHHHHTTCCCSSGGGEEEECCHHH
T ss_pred HhccCCEEEEeCCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCCc-----------chhcccchhhhcCCCCEEEcCCHHH
Confidence 34577888887421223333445555554433 47899999951 111111 23 468899999999
Q ss_pred HhhhcCCCCcch-----HHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcC
Q 044512 145 VNFLTKGGDAEK-----DDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKD 219 (230)
Q Consensus 145 ~~~l~~~~~~~~-----~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g 219 (230)
+..|+|....+. .++++.+ ++ +|+..| .+.++.+++. .++..+..+..+++|+||+|.|.+.+.+++|
T Consensus 176 ~~~L~g~~~~~~~~~~a~~aA~~l---g~--~VvlKG-~~~vi~~~~~-~~~~~~g~~~~~t~GtGD~Lag~Iaa~lA~g 248 (310)
T 2r3b_A 176 WQRLSHLPIEQQTLANNQRQQAKL---GS--TIVLKS-HRTTIFHAGE-PFQNTGGNPGMATGGTGDTLAGIIAGFLAQF 248 (310)
T ss_dssp HHHHHCCCGGGCCHHHHHHHHHHH---TS--EEEECS-TTCEEECSSS-CEECCCCCGGGCSTTHHHHHHHHHHHHHHHS
T ss_pred HHHHhCCCCCcccchHHHHHHHHh---Cc--EEEEeC-CceEEEECCE-EEEECCCCCCCCCCChHHHHHHHHHHHHHcC
Confidence 999999765432 2334444 43 444455 4566666443 4555666677889999999755555555699
Q ss_pred CCcccccc
Q 044512 220 ANIFNVKF 227 (230)
Q Consensus 220 ~~~~~a~~ 227 (230)
+++.+|++
T Consensus 249 ~~~~eA~~ 256 (310)
T 2r3b_A 249 KPTIETIA 256 (310)
T ss_dssp CSSHHHHH
T ss_pred CCHHHHHH
Confidence 99998864
No 66
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=98.94 E-value=1.3e-08 Score=79.44 Aligned_cols=142 Identities=10% Similarity=-0.003 Sum_probs=92.5
Q ss_pred ccccccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhc
Q 044512 70 LIKQAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLT 149 (230)
Q Consensus 70 ~l~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~ 149 (230)
.++++|++.++.=.-.+ +...++++.+.+.+.++++|........ + ......++++||..|+..|+
T Consensus 95 ~l~~~davviGPGlg~~----~~~~~~~~~~l~~~~p~VlDAdal~~~~---------l-~~~~~~~vlTPN~~E~~~L~ 160 (279)
T 3rpz_A 95 LEETYRAIAIGPGLPQT----ESVQQAVDHVLTADCPVILDAGALAKRT---------Y-PKREGPVILTPHPGEFFRMT 160 (279)
T ss_dssp CSSCCSEEEECTTCCCC----HHHHHHHHHHTTSSSCEEECGGGCCSCC---------C-CCCSSCEEECCCHHHHHHHH
T ss_pred hccCCCEEEECCCCCCC----HHHHHHHHHHHhhCCCEEEECCccchhh---------h-hhccCCEEEecCHHHHHHHh
Confidence 45788999887522222 2345566666677889999986321100 0 00246789999999999999
Q ss_pred CCCCcc----hHHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCcccc
Q 044512 150 KGGDAE----KDDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFNV 225 (230)
Q Consensus 150 ~~~~~~----~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~a 225 (230)
|....+ ..++++.+.+..-..|++ .|. +.++.+++..+++.........++|+||++.+.+.+.+++|.++.+|
T Consensus 161 g~~~~~~~~d~~~aa~~la~~~~~~Vvl-KG~-~~vi~~~~g~~~~~~~g~~~~at~GtGD~Lag~iaa~lA~g~~~~~A 238 (279)
T 3rpz_A 161 GVPVNELQKKRAEYAKEWAAQLQTVIVL-KGN-QTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHEDPKHA 238 (279)
T ss_dssp CCCHHHHTTSHHHHHHHHHHHHTSEEEE-CST-TCEEECTTSCEEECCCCCGGGCSTTHHHHHHHHHHHHHHHCSSHHHH
T ss_pred CCCccchHHHHHHHHHHHHHHcCeEEEE-eCC-CcEEECCCceEEEeCCCCCCCCCCChHHHHHHHHHHHHHCCCCHHHH
Confidence 976432 234566666543234444 454 45566665455666656667789999998866666667799999888
Q ss_pred cc
Q 044512 226 KF 227 (230)
Q Consensus 226 ~~ 227 (230)
++
T Consensus 239 ~~ 240 (279)
T 3rpz_A 239 VL 240 (279)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 67
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=98.89 E-value=7.2e-08 Score=81.85 Aligned_cols=149 Identities=13% Similarity=0.003 Sum_probs=99.7
Q ss_pred ccccc-ccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCcEEeeCHHHH
Q 044512 69 GLIKQ-AKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWN--HADLIKVSDDEV 145 (230)
Q Consensus 69 ~~l~~-~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~ 145 (230)
+..+. ++.+.++.=++ .. .+.+..+++.+++.+.|+++||..... .....+...++++ ..++|+||..|+
T Consensus 301 e~~~~~~~alvin~G~l-~~--~~~~~~a~~~a~~~~~PvVlDPVg~~a----~~~r~~~~~~Ll~~~~~~vItpN~~E~ 373 (540)
T 3nl6_A 301 DLAAIPHATLLLNTGSV-AP--PEMLKAAIRAYNDVKRPIVFDPVGYSA----TETRLLLNNKLLTFGQFSCIKGNSSEI 373 (540)
T ss_dssp HHTTSTTCEEEEESSCS-CC--HHHHHHHHHHHHTTTCCEEEECTTCTT----SHHHHHHHHHHTTSCCCSEEEECHHHH
T ss_pred HHHhccCCeEEEeCCCC-CH--HHHHHHHHHHHHHcCCCEEEChHHhhc----ccccHHHHHHHHhhCCCeEECCCHHHH
Confidence 45566 78887765333 23 688888888899999999999975432 1222344566776 799999999999
Q ss_pred hhhcCCCC--------------cchHHHHHHHHhcCccEEEEEecCCceEEEec-------------------Cceeeec
Q 044512 146 NFLTKGGD--------------AEKDDVVMSLWHDNLKLLLVTYGAKGCGYFTK-------------------KFKGRVP 192 (230)
Q Consensus 146 ~~l~~~~~--------------~~~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~-------------------~~~~~~~ 192 (230)
..|+|... .+..++++.+....-..|++| |+. -++.++ +..+.++
T Consensus 374 ~~L~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvlk-G~~-D~I~dg~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (540)
T 3nl6_A 374 LGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCT-GEF-DFIADGTIEGKYSLSKGTNGTSVEDIPCVAVE 451 (540)
T ss_dssp HHHTTC--------------CCHHHHHHHHHHHHHTTSEEEEC-SSS-EEEEECCGGGBCCSSSCCSSCCTTSSCEEEEE
T ss_pred HHHhCCCcccccccccccccCHHHHHHHHHHHHHHhCCEEEEc-CCC-eEEECCCccccccccccccccccCCccEEEEC
Confidence 99998652 111235566766554566665 443 344455 4555665
Q ss_pred Ccc-ccccCCCCcchHHHHHHHHHHHcCC---Cccccc
Q 044512 193 GFS-VKTIDTTGAGDAFVGSFLVSVAKDA---NIFNVK 226 (230)
Q Consensus 193 ~~~-~~~~dt~GaGDaf~ag~~~~l~~g~---~~~~a~ 226 (230)
.-. .-.-.++|.||++.+.+.+.+.++. ++.+|+
T Consensus 452 ~G~~~~m~~vtGtGc~Lsg~Iaa~la~~~~~~~~~~Aa 489 (540)
T 3nl6_A 452 AGPIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAV 489 (540)
T ss_dssp CSCCGGGGSSTTHHHHHHHHHHHHHHTCCTTCBHHHHH
T ss_pred CCChhhccCccCchHHHHHHHHHHHhcCcCCCCHHHHH
Confidence 544 3344579999999999888888887 465654
No 68
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=98.88 E-value=5.3e-09 Score=88.10 Aligned_cols=145 Identities=12% Similarity=0.013 Sum_probs=91.9
Q ss_pred cccccccEEEEccccccCchHHHHHHHHHH-HHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhh
Q 044512 69 GLIKQAKIFHYGSISLISEPCRSAHMAALK-AAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNF 147 (230)
Q Consensus 69 ~~l~~~~~v~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~ 147 (230)
+.++.++++.++.=...++ ...+++. .+++.+.|+++|+..... .. .+ +.+..+..++++||..|+..
T Consensus 316 ~~~~~~davviGpGlg~~~----~~~~~~~~~l~~~~~pvVlDadgl~~-l~-----~~-ll~~~~~~~vlTPN~~E~~~ 384 (502)
T 3rss_A 316 ELSKDVDVVAIGPGLGNNE----HVREFVNEFLKTLEKPAVIDADAINV-LD-----TS-VLKERKSPAVLTPHPGEMAR 384 (502)
T ss_dssp HHHTTCSEEEECTTCCCSH----HHHHHHHHHHHHCCSCEEECHHHHHT-CC-----HH-HHHHCSSCEEECCCHHHHHH
T ss_pred HHhccCCEEEEeCCCCCCH----HHHHHHHHHHHhcCCCEEEeCcccch-hc-----HH-HHhccCCCEEEeCCHHHHHH
Confidence 3467889998875322332 2223333 345668999999962110 00 11 11223467999999999999
Q ss_pred hcCCCCcch---HHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCCCccc
Q 044512 148 LTKGGDAEK---DDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDANIFN 224 (230)
Q Consensus 148 l~~~~~~~~---~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~~~~~ 224 (230)
|+|....+. .++++.+.+..- .+|+..|. +.++.+++..+ +.....+..+++|+||+|+|.+.+.+++|.++.+
T Consensus 385 L~g~~~~~~~~d~~aa~~la~~~~-~~VvlKG~-~~vi~~~~~~~-~~~~g~~~~at~GsGD~Lag~iaa~lA~g~~~~~ 461 (502)
T 3rss_A 385 LVKKTVGDVKYNYELAEEFAKEND-CVLVLKSA-TTIVTDGEKTL-FNITGNTGLSKGGSGDVLTGMIAGFIAQGLSPLE 461 (502)
T ss_dssp HHTCCHHHHTTCHHHHHHHHHHHT-SEEEECSS-SEEEECSSCEE-EECCCCGGGSSTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred HhCCCccchHHHHHHHHHHHHHcC-CEEEEeCC-CeEEEcCCEEE-EECCCCCccccCCchHHHHHHHHHHHhCCCCHHH
Confidence 999763221 345666665432 24555564 45566666444 4444556778999999998888888889999998
Q ss_pred ccc
Q 044512 225 VKF 227 (230)
Q Consensus 225 a~~ 227 (230)
|+.
T Consensus 462 Aa~ 464 (502)
T 3rss_A 462 AST 464 (502)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 69
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=98.84 E-value=7.8e-08 Score=74.12 Aligned_cols=150 Identities=16% Similarity=0.015 Sum_probs=94.0
Q ss_pred cccccccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHh-hhCcEEeeCHHHHhh
Q 044512 69 GLIKQAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIW-NHADLIKVSDDEVNF 147 (230)
Q Consensus 69 ~~l~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~dil~~n~~E~~~ 147 (230)
+..+.++.+.++.= ..++...+.+..+.+.+++.+.|+++||..... .....+...+++ .++++|.+|..|...
T Consensus 52 e~~~~a~al~iNiG-tl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~ga----s~~R~~~~~~ll~~~~~vIrgN~sEi~~ 126 (265)
T 3hpd_A 52 EMIRLADAVVINIG-TLDSGWRRSMVKATEIANELGKPIVLDPVGAGA----TKFRTRVSLEILSRGVDVLKGNFGEISA 126 (265)
T ss_dssp HHHHHCSEEEEECT-TCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT----BHHHHHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHHCCeEEEECC-CCChHHHHHHHHHHHHHHHcCCCEEEcCCCCCC----cHHHHHHHHHHHhcCCcEEcCCHHHHHH
Confidence 45566677666542 334445677778888899999999999974322 111123334444 379999999999999
Q ss_pred hcCCCCc---------c---hHHHHHHHHhcCccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHH
Q 044512 148 LTKGGDA---------E---KDDVVMSLWHDNLKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVS 215 (230)
Q Consensus 148 l~~~~~~---------~---~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~ 215 (230)
|.|.... . ..++++.+.++.-..|++| |+ .-++.+++..+.++.-..-.-..+|.||++.|.+.+.
T Consensus 127 L~g~~~~~~gvds~~~~~~d~~~~a~~lA~~~~~vVvlk-G~-~d~I~dg~~~~~~~~G~~~m~~vtGtGc~Lsg~iaa~ 204 (265)
T 3hpd_A 127 LLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GA-VDYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAF 204 (265)
T ss_dssp HHHHHC----------CHHHHHHHHHHHHHHTTSEEEEE-SS-SEEEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHH
T ss_pred HhcccCCCCCccCccccHHHHHHHHHHHHHHhCCEEEEe-CC-CeEEEcCCEEEEECCCChHhhcCCccchHHHHHHHHH
Confidence 9874321 1 1234556655444466665 54 4455566666666654444545689999987766666
Q ss_pred HHcCCCccccc
Q 044512 216 VAKDANIFNVK 226 (230)
Q Consensus 216 l~~g~~~~~a~ 226 (230)
+.++ ++-+|+
T Consensus 205 lA~~-~~~~Aa 214 (265)
T 3hpd_A 205 VAVT-EPLKAT 214 (265)
T ss_dssp HTTS-CHHHHH
T ss_pred HhcC-ChHHHH
Confidence 6666 444554
No 70
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=98.28 E-value=7.5e-05 Score=61.93 Aligned_cols=75 Identities=8% Similarity=0.038 Sum_probs=56.0
Q ss_pred cccEEEEccccccCc---------hHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHH
Q 044512 73 QAKIFHYGSISLISE---------PCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDD 143 (230)
Q Consensus 73 ~~~~v~~~~~~~~~~---------~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~ 143 (230)
..|++.+||+..+.+ ...+...+.++..+..++++-|...+.. +.+.....+..+++.+|.+-+|++
T Consensus 236 ~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~~e~i~~l~~~~~~iH~E~As~~----~~~l~~~i~~~i~p~vDSlGmNEq 311 (474)
T 3drw_A 236 EVDGAIFSGYQGLRTKYSDGKDANYYLRRAKEDIIEFKEKDVKIHVEFASVQ----DRKLRKKIITNILPFVDSVGIDEA 311 (474)
T ss_dssp HCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCCCS----CHHHHHHHHHHTGGGSSEEEEEHH
T ss_pred CCCEEEEeccccccccccccccHHHHHHHHHHHHHHhcCCCCeEEEEeCccc----cHHHHHHHHHHhcccccccccCHH
Confidence 689999999987665 2223334555555678899999988643 355556667789999999999999
Q ss_pred HHhhhcCC
Q 044512 144 EVNFLTKG 151 (230)
Q Consensus 144 E~~~l~~~ 151 (230)
|+..+.+.
T Consensus 312 ELa~l~~~ 319 (474)
T 3drw_A 312 EIAQILSV 319 (474)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988763
No 71
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=97.90 E-value=0.0011 Score=54.92 Aligned_cols=74 Identities=4% Similarity=0.084 Sum_probs=51.8
Q ss_pred ccccEEEEccccccCchHH-HHHHHH---HHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhh
Q 044512 72 KQAKIFHYGSISLISEPCR-SAHMAA---LKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNF 147 (230)
Q Consensus 72 ~~~~~v~~~~~~~~~~~~~-~~~~~~---l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~ 147 (230)
.++|++.++|+..+.+.+. +..... +......+.++-|+..+... .......+ .+++++|.+-+|++|+..
T Consensus 224 ~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~~~iH~ElAs~~~----~~~~~~i~-~ilp~vDSlGmNE~EL~~ 298 (455)
T 1ua4_A 224 KNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNEREIPVHLEFAFTPD----EKVREEIL-NVLGMFYSVGLNEVELAS 298 (455)
T ss_dssp GGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTTCCEEEECCCCCC----HHHHHHHH-HHGGGCSEEEECHHHHHH
T ss_pred cCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCCceEEEEeCCccC----HHHHHHHH-hhhccCcccccCHHHHHH
Confidence 3499999999987666431 222222 22335677899999986432 44445666 999999999999999987
Q ss_pred hcC
Q 044512 148 LTK 150 (230)
Q Consensus 148 l~~ 150 (230)
+.+
T Consensus 299 l~~ 301 (455)
T 1ua4_A 299 IME 301 (455)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 72
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=97.78 E-value=5.7e-05 Score=63.19 Aligned_cols=137 Identities=14% Similarity=0.072 Sum_probs=84.5
Q ss_pred cccccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcC
Q 044512 71 IKQAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTK 150 (230)
Q Consensus 71 l~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~ 150 (230)
.++.+++.++.=.-.++. + +.++++ .. |+++|..--.. ..+.+.++...+++||..|+..|+|
T Consensus 290 ~~~~~a~~iGPGlG~~~~--~-l~~~l~----~~-p~VlDADaL~~---------~~~~~~~~~~~VlTPh~~E~~rL~g 352 (475)
T 3k5w_A 290 PNLLSAFALGMGLENIPK--D-FNRWLE----LA-PCVLDAGVFYH---------KEILQALEKEAVLTPHPKEFLSLLN 352 (475)
T ss_dssp CSSCSEEEECTTCSSCCT--T-HHHHHH----HS-CEEEEGGGGGS---------GGGGTTTTSSEEEECCHHHHHHHHH
T ss_pred ccCCCEEEEcCCCCCCHH--H-HHHHHh----cC-CEEEECcccCC---------chhhhccCCCEEECCCHHHHHHHhC
Confidence 367888888763223322 2 344442 24 99999862110 0112233456899999999999997
Q ss_pred C-----CCcc----hHHHHHHHHhcC-ccEEEEEecCCceEEEecCceeeecCccccccCCCCcchHHHHHHHHHHHcCC
Q 044512 151 G-----GDAE----KDDVVMSLWHDN-LKLLLVTYGAKGCGYFTKKFKGRVPGFSVKTIDTTGAGDAFVGSFLVSVAKDA 220 (230)
Q Consensus 151 ~-----~~~~----~~~~~~~l~~~g-~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~ag~~~~l~~g~ 220 (230)
. +..+ ..++++.+.+.. ...|++| |..- ++.+++..+ +.........+.|.||++++.+.+-+++|.
T Consensus 353 ~~~~~v~~~~~~~d~~~aa~~la~~~g~~~VvlK-G~~~-vI~~~~~~~-~~~~g~~~mat~GtGdvLsg~Iaa~lA~g~ 429 (475)
T 3k5w_A 353 LVGINISMLELLDNKLEIARDFSQKYPKVVLLLK-GANT-LIAHQGQVF-INILGSVALAKAGSGDVLAGLILSLLSQNY 429 (475)
T ss_dssp HTSCCCCTTSGGGSCC--CHHHHHHCTTEEEEEC-SSSE-EEEETTEEE-EECCCCGGGCSTTHHHHHHHHHHHHHHTTC
T ss_pred CccCCCCcchhHHHHHHHHHHHHHHcCCeEEEEe-CCCC-EEECCCEEE-EECCCCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 5 3222 124566776654 4466665 4433 344454444 333333445689999999999999999999
Q ss_pred Ccccccc
Q 044512 221 NIFNVKF 227 (230)
Q Consensus 221 ~~~~a~~ 227 (230)
++.+|+.
T Consensus 430 ~~~~Aa~ 436 (475)
T 3k5w_A 430 TPLDAAI 436 (475)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 9988864
No 73
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=97.37 E-value=0.019 Score=47.63 Aligned_cols=72 Identities=10% Similarity=0.102 Sum_probs=51.8
Q ss_pred ccccEEEEccccccCchH----HHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhh
Q 044512 72 KQAKIFHYGSISLISEPC----RSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNF 147 (230)
Q Consensus 72 ~~~~~v~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~ 147 (230)
.+.|++.+||+.++.+-+ .+...+.++.....++++-+...+.. +.+.....+ .+++++|-+-+|++|+..
T Consensus 227 ~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~iH~E~As~~----~~~l~~~i~-~ilp~vDSlGmNEqELa~ 301 (457)
T 1l2l_A 227 KRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAFTP----DEVVRLEIV-KLLKHFYSVGLNEVELAS 301 (457)
T ss_dssp TTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEEECCCCS----SHHHHHHHH-HHGGGCSEEEECHHHHHH
T ss_pred cCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCeEEEEECCcc----cHHHHHHHH-hhccccccCccCHHHHHH
Confidence 459999999998766511 12223333344678899999988643 345556666 999999999999999987
Q ss_pred h
Q 044512 148 L 148 (230)
Q Consensus 148 l 148 (230)
+
T Consensus 302 l 302 (457)
T 1l2l_A 302 V 302 (457)
T ss_dssp H
T ss_pred H
Confidence 5
No 74
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=97.19 E-value=0.04 Score=45.76 Aligned_cols=73 Identities=5% Similarity=0.092 Sum_probs=51.0
Q ss_pred ccccEEEEccccccCc-----h-HHHHHHH---HHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCH
Q 044512 72 KQAKIFHYGSISLISE-----P-CRSAHMA---ALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSD 142 (230)
Q Consensus 72 ~~~~~v~~~~~~~~~~-----~-~~~~~~~---~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~ 142 (230)
.+.|++.+||+.++.+ . -.+.+.+ .+......++++-+...+.. +.......+ .+++++|-+-+|+
T Consensus 232 ~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~~~~~~iH~E~As~~----~~~l~~~i~-~ilp~vDSlGmNE 306 (467)
T 1gc5_A 232 RNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILNRYNVKSHFEFAYTA----NRRVREALV-ELLPKFTSVGLNE 306 (467)
T ss_dssp TTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCCCC----CHHHHHHHH-HHGGGCSEEEECH
T ss_pred cCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhcCCCCeEEEEECCcc----cHHHHHHHH-hhccccccCccCH
Confidence 4599999999977655 2 2222222 33333557889999988643 355556666 9999999999999
Q ss_pred HHHhhhc
Q 044512 143 DEVNFLT 149 (230)
Q Consensus 143 ~E~~~l~ 149 (230)
+|+..+.
T Consensus 307 qELa~l~ 313 (467)
T 1gc5_A 307 VELASIM 313 (467)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998543
No 75
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=68.29 E-value=11 Score=24.97 Aligned_cols=80 Identities=11% Similarity=0.066 Sum_probs=54.0
Q ss_pred cccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCC
Q 044512 73 QAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGG 152 (230)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~ 152 (230)
.++.+..+|. . +.+.+..+.+..+.+++.++.||... .+.-+..+.+.++.+...++...+. |..
T Consensus 26 ~~~iI~t~Gs--i---~~~~l~~I~~~~~~r~VIi~TD~D~~------GekIRk~i~~~lp~~~hafi~r~~~----gVE 90 (119)
T 2fcj_A 26 PVVIVCTNGT--I---SDARLEELADELEGYDVYLLADADEA------GEKLRRQFRRMFPEAEHLYIDRAYR----EVA 90 (119)
T ss_dssp CCEEEECCSC--C---CHHHHHHHHHHTTTSEEEEECCSSHH------HHHHHHHHHHHCTTSEEECCCTTTC----STT
T ss_pred CCCEEEeCCc--c---CHHHHHHHHHHhcCCCEEEEECCCcc------HHHHHHHHHHHCCCCcEEeccCCcc----Ccc
Confidence 6678877774 2 33455555555556677777788732 4456777888999999999988874 666
Q ss_pred CcchHHHHHHHHhcC
Q 044512 153 DAEKDDVVMSLWHDN 167 (230)
Q Consensus 153 ~~~~~~~~~~l~~~g 167 (230)
..+.+...+.|.+..
T Consensus 91 ~a~~~~I~~aL~~~~ 105 (119)
T 2fcj_A 91 AAPIWHLAQVLLRAR 105 (119)
T ss_dssp TSCHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHhcc
Confidence 666666666665543
No 76
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=54.10 E-value=52 Score=22.82 Aligned_cols=72 Identities=7% Similarity=0.107 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeC-----HHHHhhhcCCCCcchHHHHHHHHh
Q 044512 91 SAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVS-----DDEVNFLTKGGDAEKDDVVMSLWH 165 (230)
Q Consensus 91 ~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n-----~~E~~~l~~~~~~~~~~~~~~l~~ 165 (230)
+.+.++++.+++.|..+.+..+... + .+.+..+++.+|.+.++ .+....+.|......-+.++.+.+
T Consensus 19 ~~~~~l~~~~~~~g~~~~l~TNG~l---~-----~~~~~~l~~~~d~v~isld~~~~~~~~~~~g~~~~~i~~~i~~l~~ 90 (182)
T 3can_A 19 EFLIDILKRCGQQGIHRAVDTTLLA---R-----KETVDEVMRNCELLLIDLKSMDSTVHQTFCDVPNELILKNIRRVAE 90 (182)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTCC---C-----HHHHHHHHHTCSEEEEECCCSCHHHHHHHHSSCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCcEEEECCCCC---C-----HHHHHHHHhhCCEEEEECCCCCHHHHHHHhCCCHHHHHHHHHHHHh
Confidence 4446888888888888888776431 1 24455566667776653 444455666554333345566666
Q ss_pred cCccE
Q 044512 166 DNLKL 170 (230)
Q Consensus 166 ~g~~~ 170 (230)
.|...
T Consensus 91 ~g~~v 95 (182)
T 3can_A 91 ADFPY 95 (182)
T ss_dssp TTCCE
T ss_pred CCCeE
Confidence 66543
No 77
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=50.60 E-value=80 Score=23.99 Aligned_cols=64 Identities=17% Similarity=0.144 Sum_probs=39.8
Q ss_pred cccccEEEEccccccCchHHHHHHHHHHHHHHC-CCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEe-eCHH
Q 044512 71 IKQAKIFHYGSISLISEPCRSAHMAALKAAKDA-GVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIK-VSDD 143 (230)
Q Consensus 71 l~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~-~n~~ 143 (230)
-..+|++-+++-+.. +...+.+..+++..++. +.++++|... ++..+..+.. .+..+++- +|..
T Consensus 45 ~~GAdiIDIg~~s~~-~eE~~rv~~vi~~l~~~~~~pisIDT~~-------~~v~~aal~a-~~Ga~iINdvs~~ 110 (271)
T 2yci_X 45 EKGAHYLDVNTGPTA-DDPVRVMEWLVKTIQEVVDLPCCLDSTN-------PDAIEAGLKV-HRGHAMINSTSAD 110 (271)
T ss_dssp HTTCSEEEEECCSCS-SCHHHHHHHHHHHHHHHCCCCEEEECSC-------HHHHHHHHHH-CCSCCEEEEECSC
T ss_pred HCCCCEEEEcCCcCc-hhHHHHHHHHHHHHHHhCCCeEEEeCCC-------HHHHHHHHHh-CCCCCEEEECCCC
Confidence 357899999886532 22456677777776654 8999999872 3333333332 24577776 6654
No 78
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=49.21 E-value=72 Score=23.03 Aligned_cols=90 Identities=13% Similarity=0.097 Sum_probs=51.1
Q ss_pred cEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCC-
Q 044512 75 KIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGD- 153 (230)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~- 153 (230)
.++|+.. .-.++..+++..+.+++++.|++-++=++. .......+.+.+..+.++.+...-- +.+...
T Consensus 16 ~~~YF~~--~G~eNT~~tl~la~era~e~~Ik~iVVAS~-------sG~TA~k~~e~~~~i~lVvVTh~~G--F~~pg~~ 84 (201)
T 1vp8_A 16 KIVYFNK--PGRENTEETLRLAVERAKELGIKHLVVASS-------YGDTAMKALEMAEGLEVVVVTYHTG--FVREGEN 84 (201)
T ss_dssp CCEEESS--CSGGGHHHHHHHHHHHHHHHTCCEEEEECS-------SSHHHHHHHHHCTTCEEEEEECCTT--SSSTTCC
T ss_pred eEEEecC--CCcccHHHHHHHHHHHHHHcCCCEEEEEeC-------CChHHHHHHHHhcCCeEEEEeCcCC--CCCCCCC
Confidence 3455553 344566777788888999988765554442 2223344444556678887764422 111111
Q ss_pred cchHHHHHHHHhcCccEEEEEe
Q 044512 154 AEKDDVVMSLWHDNLKLLLVTY 175 (230)
Q Consensus 154 ~~~~~~~~~l~~~g~~~vvvt~ 175 (230)
+=.++..+.|.+.|++.+--|.
T Consensus 85 e~~~e~~~~L~~~G~~V~t~tH 106 (201)
T 1vp8_A 85 TMPPEVEEELRKRGAKIVRQSH 106 (201)
T ss_dssp SSCHHHHHHHHHTTCEEEECCC
T ss_pred cCCHHHHHHHHhCCCEEEEEec
Confidence 1124577889889986655443
No 79
>2dgb_A Hypothetical protein PURS; purine, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.10A {Thermus thermophilus} PDB: 2cuw_A
Probab=49.11 E-value=14 Score=22.53 Aligned_cols=30 Identities=23% Similarity=0.216 Sum_probs=22.6
Q ss_pred CChhHHHHHHHHHHCCCCccceEecCCCcceEEEEE
Q 044512 5 DDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVT 40 (230)
Q Consensus 5 ~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~ 40 (230)
.|+.|+.+...+...|+++..+ +++.++.+
T Consensus 17 lDpqG~av~~al~~LG~~v~~V------R~gK~~~l 46 (84)
T 2dgb_A 17 LDPQGRAVEGVLKDLGHPVEEV------RVGKVLEI 46 (84)
T ss_dssp CCHHHHHHHHHHHHTTCCCSEE------EEEEEEEE
T ss_pred cChHHHHHHHHHHHCCCChhhE------EEEEEEEE
Confidence 4899999999999999985444 34555544
No 80
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=44.58 E-value=86 Score=22.58 Aligned_cols=74 Identities=18% Similarity=0.144 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEee-----CHHHHhhhcCCCCcchHHHHHHHHh
Q 044512 91 SAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKV-----SDDEVNFLTKGGDAEKDDVVMSLWH 165 (230)
Q Consensus 91 ~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~-----n~~E~~~l~~~~~~~~~~~~~~l~~ 165 (230)
+.+.++++.+++.|..+.+..+..... . .+.+..+++.+|.+.+ +.+....+.|.......++++.+.+
T Consensus 85 ~~l~~l~~~~~~~~~~i~i~Tng~~~~-~-----~~~~~~l~~~~~~v~isld~~~~~~~~~~~~~~~~~~~~~i~~l~~ 158 (245)
T 3c8f_A 85 EFVRDWFRACKKEGIHTCLDTNGFVRR-Y-----DPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLAN 158 (245)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCCCCC-C-----CHHHHHHHHTCSEEEEECCCSSHHHHHHHHSSCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCcCc-C-----HHHHHHHHHhCCEEEEeCCCCCHHHhhhccCCCHHHHHHHHHHHHh
Confidence 456788888888888877766532100 1 2344555555676655 4555566666554333455677777
Q ss_pred cCccE
Q 044512 166 DNLKL 170 (230)
Q Consensus 166 ~g~~~ 170 (230)
.|.+.
T Consensus 159 ~g~~v 163 (245)
T 3c8f_A 159 KNVKV 163 (245)
T ss_dssp HTCCE
T ss_pred cCCEE
Confidence 77654
No 81
>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}
Probab=41.48 E-value=71 Score=21.19 Aligned_cols=48 Identities=10% Similarity=0.084 Sum_probs=31.5
Q ss_pred hhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCC
Q 044512 7 EFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPS 56 (230)
Q Consensus 7 ~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~ 56 (230)
..-+.+.+.|++.|+....-... .+.+....+.|++|....+......
T Consensus 79 ~dvd~~~~~l~~~G~~i~~~p~~--~~~G~~~~~~DPdG~~iel~~~~~~ 126 (148)
T 3rhe_A 79 EMVDEIHRQWSDKEISIIQPPTQ--MDFGYTFVGVDPDEHRLRIFCLKRT 126 (148)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEE--ETTEEEEEEECTTCCEEEEEEEC--
T ss_pred HHHHHHHHHHHhCCCEEEeCCee--cCCCcEEEEECCCCCEEEEEEcChh
Confidence 34577889999999986421111 1335777788999999887764333
No 82
>1vq3_A Phosphoribosylformylglycinamidine synthase, PURS; TM1244, PURS SUB 6.3.5.3), structural genomics, joint center for structural JCSG; 1.90A {Thermotoga maritima} SCOP: d.284.1.1 PDB: 3d54_B*
Probab=40.22 E-value=20 Score=22.58 Aligned_cols=32 Identities=16% Similarity=0.148 Sum_probs=23.4
Q ss_pred CChhHHHHHHHHHHCCCCccceEecCCCcceEEEEEE
Q 044512 5 DDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTL 41 (230)
Q Consensus 5 ~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~ 41 (230)
-|+.|+.+...|...|++. +. +.++|.++.+.
T Consensus 29 lDPqG~aV~~aL~~LG~~~--V~---~VR~GK~~el~ 60 (94)
T 1vq3_A 29 RDPRGETIERVLREEKGLP--VK---KLRLGKSIHLE 60 (94)
T ss_dssp CCHHHHHHHHHHHHTTCCC--EE---EEEEEEEEEEE
T ss_pred cCcHHHHHHHHHHHcCCCc--cc---eeeeeeEEEEE
Confidence 4899999999999999972 22 23566666553
No 83
>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}
Probab=39.92 E-value=71 Score=20.47 Aligned_cols=43 Identities=5% Similarity=-0.203 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEec
Q 044512 8 FGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYR 53 (230)
Q Consensus 8 ~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~ 53 (230)
.-+.+.+.|++.|+....... .+.+....+.|++|....+...
T Consensus 85 d~~~~~~~l~~~G~~~~~~~~---~~~g~~~~~~DPdG~~iel~~~ 127 (136)
T 2rk0_A 85 DLDVLEERLAKAGAAFTPTQE---LPFGWILAFRDADNIALEAMLG 127 (136)
T ss_dssp HHHHHHHHHHHHTCCBCCCEE---ETTEEEEEEECTTCCEEEEEEE
T ss_pred HHHHHHHHHHHCCCcccCccc---cCCceEEEEECCCCCEEEEEEc
Confidence 446778999999998654322 2345667778999999877654
No 84
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Probab=38.44 E-value=17 Score=23.46 Aligned_cols=28 Identities=11% Similarity=-0.014 Sum_probs=23.1
Q ss_pred cCCCCcchHHHHHHHHHHHcC-CCccccc
Q 044512 199 IDTTGAGDAFVGSFLVSVAKD-ANIFNVK 226 (230)
Q Consensus 199 ~dt~GaGDaf~ag~~~~l~~g-~~~~~a~ 226 (230)
.|-.|-||..-|-+.|++++| .+.+||.
T Consensus 64 ~DKh~kGd~aEA~iAyAWleG~is~eEav 92 (133)
T 1ztd_A 64 VDKHAKGDYAEALIAKAWLMGLISEREAV 92 (133)
T ss_dssp GGTTCHHHHHHHHHHHHHHTTSSCHHHHH
T ss_pred ccccCccHHHHHHHHHHHHhccccHHHHH
Confidence 467889999999999999998 5666653
No 85
>1gtd_A MTH169; synthetase, FGAM synthetase, purine synthesis pathway, PSI, protein structure initiative, NESG; 2.56A {Methanobacterium thermoautotrophicum} SCOP: d.284.1.1
Probab=38.35 E-value=18 Score=22.17 Aligned_cols=30 Identities=10% Similarity=-0.062 Sum_probs=22.3
Q ss_pred CChhHHHHHHHHHHCCCCccceEecCCCcceEEEEE
Q 044512 5 DDEFGHMLVNILKQNNVKTEGVCFDNHARTALAFVT 40 (230)
Q Consensus 5 ~D~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~ 40 (230)
.|+.|+.+...|...|+.+..+ +++.++.+
T Consensus 16 lDpqG~av~~al~~LG~~v~~V------R~gK~~~l 45 (85)
T 1gtd_A 16 LNPEAATIERALALLGYEVEDT------DTTDVITF 45 (85)
T ss_dssp CCHHHHHHHHHHHHHTCCCEEE------EEEEEEEE
T ss_pred cCcHHHHHHHHHHHcCCChheE------EEEEEEEE
Confidence 5899999999999999954433 45555554
No 86
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=38.31 E-value=72 Score=19.90 Aligned_cols=42 Identities=19% Similarity=0.091 Sum_probs=27.0
Q ss_pred HHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEE
Q 044512 9 GHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMF 51 (230)
Q Consensus 9 g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~ 51 (230)
=+.+.+.|++.|+....-..... .......+.|++|....++
T Consensus 85 v~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~ 126 (127)
T 3e5d_A 85 VDELTEKLRQDGFAIAGEPRMTG-DGYYESVVLDPEGNRIEIT 126 (127)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECT-TSCEEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHcCCeEecCcccCC-CCcEEEEEECCCCCEEEEe
Confidence 46788999999998653222221 2224566778888877554
No 87
>2yx5_A UPF0062 protein MJ1593; anti parallel beta sheet, NPPSFA, national project on protei structural and functional analyses; 2.30A {Methanocaldococcus jannaschii}
Probab=37.55 E-value=20 Score=21.79 Aligned_cols=30 Identities=10% Similarity=0.001 Sum_probs=22.6
Q ss_pred CChhHHHHHHHHHHCCCC-ccceEecCCCcceEEEEE
Q 044512 5 DDEFGHMLVNILKQNNVK-TEGVCFDNHARTALAFVT 40 (230)
Q Consensus 5 ~D~~g~~i~~~l~~~gi~-~~~i~~~~~~~t~~~~v~ 40 (230)
.|+.|+.+...|+..|++ +. +.+++.++.+
T Consensus 15 lDpqG~av~~al~~lG~~~v~------~Vr~gk~~~l 45 (83)
T 2yx5_A 15 LNPEGRTIQRALNFLGFNNVK------EVQTYKMIDI 45 (83)
T ss_dssp CCHHHHHHHHHHHHTTCTTCC------CCCCCEEEEE
T ss_pred cCcHHHHHHHHHHHcCCCChh------hEEEEEEEEE
Confidence 489999999999999995 33 3356666655
No 88
>3ke2_A Uncharacterized protein YP_928783.1; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.50A {Shewanella amazonensis SB2B}
Probab=35.27 E-value=31 Score=22.50 Aligned_cols=42 Identities=14% Similarity=0.068 Sum_probs=35.6
Q ss_pred EeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecCCc
Q 044512 138 IKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGAKG 179 (230)
Q Consensus 138 l~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~~g 179 (230)
=.+|...+..++|.+..+..+.++.|.+.|+...++..|+++
T Consensus 32 ~~~nvp~L~~~TGmPRRTiQd~I~aL~elgI~~~FvQ~G~R~ 73 (117)
T 3ke2_A 32 ARHNLLSLGKLTGMPRRTLQDAIASFADIGIEVEFVQDGERH 73 (117)
T ss_dssp SCCCHHHHHHHHCCCHHHHHHHHHTGGGGTCEEEEECCTTCC
T ss_pred CCCCHHHHHHHHCCCHhHHHHHHHHhhhCCeEEEEEeccccC
Confidence 456888999999999988888999999999988888777654
No 89
>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2
Probab=35.04 E-value=78 Score=19.35 Aligned_cols=40 Identities=15% Similarity=0.037 Sum_probs=27.3
Q ss_pred hHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEE
Q 044512 8 FGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMF 51 (230)
Q Consensus 8 ~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~ 51 (230)
.=+.+.+.|++.|+...... .. . +....+.|++|....+.
T Consensus 73 d~~~~~~~l~~~G~~~~~p~-~~--~-~~~~~~~DPdG~~iel~ 112 (113)
T 1xqa_A 73 QVDKINQRLKEDGFLVEPPK-HA--H-AYTFYVEAPGGFTIEVM 112 (113)
T ss_dssp HHHHHHHHHHHTTCCCCCCE-EC----CEEEEEEETTTEEEEEE
T ss_pred HHHHHHHHHHHCCCEEecCc-CC--C-cEEEEEECCCCcEEEEe
Confidence 34677888999999865432 22 2 56677788999887553
No 90
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=34.82 E-value=95 Score=20.29 Aligned_cols=46 Identities=4% Similarity=-0.132 Sum_probs=30.3
Q ss_pred HHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEecCCC
Q 044512 9 GHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPS 56 (230)
Q Consensus 9 g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~ 56 (230)
=+.+.+.+.+.|+....=... ..-++...+.|++|++..+.+..+.
T Consensus 91 vd~~~~~~~~~g~~~~~~p~~--~~~~~~~~f~DPDGn~iEi~~~~p~ 136 (149)
T 4gym_A 91 VDRFADTALGAGGTVARDPMD--YGFMYGRSFHDLDGHLWEVMWMSAE 136 (149)
T ss_dssp HHHHHHHHHHTTCEECSCCEE--CSSEEEEEEECTTCCEEEEEEECTT
T ss_pred HHHHHHHHHhcCceeeccccc--cCCEEEEEEEcCCCCEEEEEEEChh
Confidence 356778888888875422112 1345677788999999988764443
No 91
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=34.67 E-value=50 Score=24.59 Aligned_cols=43 Identities=14% Similarity=0.140 Sum_probs=31.0
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......-++..++.|...|++. |+
T Consensus 81 G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~Cv-GE 123 (233)
T 2jgq_A 81 KIHTLLIGHSERRTLLKESPSFLKEKFDFFKSKNFKIVYCI-GE 123 (233)
T ss_dssp TCCEEEECCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEE-CC
T ss_pred CCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEc-CC
Confidence 69999999999999988776544334455667888666654 44
No 92
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=34.60 E-value=1.3e+02 Score=21.78 Aligned_cols=88 Identities=9% Similarity=0.003 Sum_probs=44.3
Q ss_pred EEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEeeCHHHHhhhcCCCCcc
Q 044512 76 IFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKVSDDEVNFLTKGGDAE 155 (230)
Q Consensus 76 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~ 155 (230)
++|+.. .-.++..+++..+.+++++.+++-++=++. .......+.+.+.. +++.+...---.=-|... =
T Consensus 25 i~YF~~--~G~eNT~~tl~la~era~e~~Ik~iVVASs-------sG~TA~k~~e~~~~-~lVvVTh~~GF~~pg~~e-~ 93 (206)
T 1t57_A 25 ICYFEE--PGKENTERVLELVGERADQLGIRNFVVASV-------SGETALRLSEMVEG-NIVSVTHHAGFREKGQLE-L 93 (206)
T ss_dssp EEEESS--CSGGGHHHHHHHHHHHHHHHTCCEEEEECS-------SSHHHHHHHTTCCS-EEEEECCCTTSSSTTCCS-S
T ss_pred EEEecC--CCcccHHHHHHHHHHHHHHcCCCEEEEEeC-------CCHHHHHHHHHccC-CEEEEeCcCCCCCCCCCc-C
Confidence 455543 334556677777788888888765444442 12222333333333 677665432110001111 1
Q ss_pred hHHHHHHHHhcCccEEEEE
Q 044512 156 KDDVVMSLWHDNLKLLLVT 174 (230)
Q Consensus 156 ~~~~~~~l~~~g~~~vvvt 174 (230)
.++..+.|.+.|++.+--|
T Consensus 94 ~~e~~~~L~~~G~~V~t~t 112 (206)
T 1t57_A 94 EDEARDALLERGVNVYAGS 112 (206)
T ss_dssp CHHHHHHHHHHTCEEECCS
T ss_pred CHHHHHHHHhCCCEEEEee
Confidence 2456777888887554433
No 93
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=34.37 E-value=90 Score=20.30 Aligned_cols=42 Identities=17% Similarity=0.078 Sum_probs=28.2
Q ss_pred HHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEE
Q 044512 9 GHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMF 51 (230)
Q Consensus 9 g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~ 51 (230)
-+.+.+.|++.|+........ ....+....+.|++|....+.
T Consensus 98 ld~~~~~l~~~G~~~~~~~~~-~~~~~~~~~~~DPdG~~iel~ 139 (141)
T 3ghj_A 98 IEPLKKALESKGVSVHGPVNQ-EWMQAVSLYFADPNGHALEFT 139 (141)
T ss_dssp HHHHHHHHHHTTCCCEEEEEE-GGGTEEEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHCCCeEeCCccc-CCCCceEEEEECCCCCEEEEE
Confidence 467889999999987622211 112346677788999887654
No 94
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=34.32 E-value=85 Score=19.59 Aligned_cols=41 Identities=12% Similarity=0.028 Sum_probs=26.6
Q ss_pred HHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEE
Q 044512 9 GHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFM 50 (230)
Q Consensus 9 g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~ 50 (230)
=+.+.+.|++.|+.......... .......+.|++|....+
T Consensus 92 ~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel 132 (134)
T 3l7t_A 92 VEASRQELIALGIRVEEVRYDDY-TGKKMAFFFDPDGLPLEL 132 (134)
T ss_dssp HHHHHHHHHHHTCCCCCCEECTT-SCCEEEEEECTTCCEEEE
T ss_pred HHHHHHHHHhCCCcccceeccCC-CceEEEEEECCCCCEEEE
Confidence 46778999999998764432211 233555667888877654
No 95
>1t4a_A PURS; tetramer, complex formyl glycinamide synthetase, FGAR, structural protein; 2.00A {Bacillus subtilis} SCOP: d.284.1.1 PDB: 1twj_A
Probab=34.06 E-value=28 Score=21.20 Aligned_cols=30 Identities=17% Similarity=0.121 Sum_probs=22.1
Q ss_pred CChhHHHHHHHHHHCCCC-ccceEecCCCcceEEEEE
Q 044512 5 DDEFGHMLVNILKQNNVK-TEGVCFDNHARTALAFVT 40 (230)
Q Consensus 5 ~D~~g~~i~~~l~~~gi~-~~~i~~~~~~~t~~~~v~ 40 (230)
.|+.|+.+...+...|++ +..+ +++.++.+
T Consensus 15 lDpqG~av~~al~~LG~~~v~~V------R~gK~~~l 45 (84)
T 1t4a_A 15 LDPQGSAVQHALHSMTYNEVQDV------RIGKYMEL 45 (84)
T ss_dssp CCHHHHHHHHHHHHTTCTTEEEE------EEEEEEEE
T ss_pred cCcHHHHHHHHHHHcCCCChhhe------EEEEEEEE
Confidence 589999999999999995 4433 45555544
No 96
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=33.17 E-value=49 Score=24.94 Aligned_cols=43 Identities=16% Similarity=0.138 Sum_probs=31.9
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......-++..++.|...|++ .|+
T Consensus 86 G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~C-vGE 128 (250)
T 1yya_A 86 GCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILC-VGE 128 (250)
T ss_dssp TCSEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEE-ECC
T ss_pred CCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEE-cCC
Confidence 6999999999999999877654434445566788866665 455
No 97
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=33.17 E-value=55 Score=24.63 Aligned_cols=43 Identities=14% Similarity=0.193 Sum_probs=31.9
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......-++..++.|...|++. |+
T Consensus 87 G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~Cv-GE 129 (248)
T 1o5x_A 87 NIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCF-GE 129 (248)
T ss_dssp TCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEE-CC
T ss_pred CCCEEEeCChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEc-CC
Confidence 69999999999999998776544344455667888666664 44
No 98
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=32.99 E-value=48 Score=24.97 Aligned_cols=43 Identities=12% Similarity=0.183 Sum_probs=31.6
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......=++...+.|...|++. |+
T Consensus 87 G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~Cv-GE 129 (249)
T 3th6_A 87 GGQWVILGHSERRHVFKEDDVLIGEKIKHALESGLNVIACI-GE 129 (249)
T ss_dssp TCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEE-CC
T ss_pred CCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEc-CC
Confidence 69999999999999998876543333455667888666654 54
No 99
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=32.97 E-value=49 Score=24.94 Aligned_cols=43 Identities=9% Similarity=0.067 Sum_probs=31.8
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......-++..++.|...|++. |+
T Consensus 88 G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~Cv-GE 130 (251)
T 2vxn_A 88 GVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACI-GE 130 (251)
T ss_dssp TCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEE-CC
T ss_pred CCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEc-CC
Confidence 69999999999999998776544344455667888666654 54
No 100
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=32.74 E-value=53 Score=24.68 Aligned_cols=43 Identities=14% Similarity=0.154 Sum_probs=31.7
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......-++..++.|...|++. |+
T Consensus 87 G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~Cv-GE 129 (248)
T 1r2r_A 87 GATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACI-GE 129 (248)
T ss_dssp TCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEE-CC
T ss_pred CCCEEEECChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEc-CC
Confidence 69999999999999998776544334455667888666654 55
No 101
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=32.27 E-value=51 Score=24.80 Aligned_cols=43 Identities=14% Similarity=0.099 Sum_probs=31.5
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......-++..++.|...|++. |+
T Consensus 86 G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~Cv-GE 128 (247)
T 1ney_A 86 GAKYVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCI-GE 128 (247)
T ss_dssp TCCEEEESCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEE-CC
T ss_pred CCCEEEECChhhccccCCCHHHHHHHHHHHHHCCCEEEEEc-CC
Confidence 69999999999999998776544334455667888666654 54
No 102
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=31.88 E-value=51 Score=24.92 Aligned_cols=43 Identities=12% Similarity=0.101 Sum_probs=31.6
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......=++...+.|...|++ .|+
T Consensus 89 G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIlC-vGE 131 (255)
T 3qst_A 89 GIEWTILGHSERRDILKEDDEFLAAKAKFALENGMKIIYC-CGE 131 (255)
T ss_dssp TCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEE-ECC
T ss_pred CCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEE-cCC
Confidence 6999999999999999887654433345566788866655 455
No 103
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=31.80 E-value=52 Score=24.82 Aligned_cols=43 Identities=12% Similarity=0.235 Sum_probs=31.5
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......-++..++.|...|++ .|+
T Consensus 90 G~~~ViiGHSERR~~f~Etd~~V~~Kv~~Al~~GL~pIlC-vGE 132 (254)
T 3m9y_A 90 GVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIIC-VGE 132 (254)
T ss_dssp TCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEE-ECC
T ss_pred CCCEEEECcccccCccCCCHHHHHHHHHHHHHCCCEEEEE-cCC
Confidence 7999999999999999887654333344566788866665 455
No 104
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=31.76 E-value=51 Score=24.94 Aligned_cols=43 Identities=9% Similarity=0.146 Sum_probs=31.7
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......-++..++.|...|++. |+
T Consensus 88 G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~Cv-GE 130 (257)
T 2yc6_A 88 GLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCV-GE 130 (257)
T ss_dssp TCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEE-CC
T ss_pred CCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEc-CC
Confidence 69999999999999998776544334455667888666654 44
No 105
>4ham_A LMO2241 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, winged helix-turn-helix, four helix bundle; 1.91A {Listeria monocytogenes}
Probab=31.63 E-value=64 Score=21.30 Aligned_cols=44 Identities=14% Similarity=-0.012 Sum_probs=34.7
Q ss_pred EeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecCCceEEEe
Q 044512 138 IKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGAKGCGYFT 184 (230)
Q Consensus 138 l~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~~g~~~~~ 184 (230)
-.|++.++...+|....+..++++.|...|. |.+...+|.++..
T Consensus 37 ~LPser~La~~~gVSr~tVReAl~~L~~eGl---v~~~~g~G~~V~~ 80 (134)
T 4ham_A 37 KILSIREFASRIGVNPNTVSKAYQELERQEV---IITVKGKGTFIAN 80 (134)
T ss_dssp EECCHHHHHHHHTCCHHHHHHHHHHHHHTTS---EEEETTTEEEECC
T ss_pred CCccHHHHHHHHCCCHHHHHHHHHHHHHCCc---EEEEcCcEEEEeC
Confidence 3468889999999998888899999998885 5555557887754
No 106
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=30.98 E-value=54 Score=24.86 Aligned_cols=43 Identities=19% Similarity=0.206 Sum_probs=32.0
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.+.....-++..++.|...|++. |+
T Consensus 86 G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIvCv-GE 128 (259)
T 2i9e_A 86 GADWVILGHSERRQIFGESDELIAEKVCHALESGLKVIACI-GE 128 (259)
T ss_dssp TCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEE-CC
T ss_pred CCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEc-CC
Confidence 69999999999999998876554444455667888666654 55
No 107
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=30.89 E-value=37 Score=27.81 Aligned_cols=23 Identities=13% Similarity=0.196 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCC
Q 044512 90 RSAHMAALKAAKDAGVLLSYDPN 112 (230)
Q Consensus 90 ~~~~~~~l~~~~~~~~~~~~d~~ 112 (230)
.+...++++.|+++|++|++|..
T Consensus 76 ~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 76 EDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEc
Confidence 47789999999999999999875
No 108
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=30.69 E-value=58 Score=24.42 Aligned_cols=48 Identities=6% Similarity=0.089 Sum_probs=33.2
Q ss_pred HHHhh--hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 129 KSIWN--HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 129 ~~~l~--~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
...|. .+++++++++|-+.++++.......=++..++.|...|++. |+
T Consensus 74 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~Cv-GE 123 (244)
T 2v5b_A 74 LASLKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCV-GE 123 (244)
T ss_dssp HHHHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEE-CC
T ss_pred HHHHHHcCCCEEEeCchhhhhccCCCHHHHHHHHHHHHHCCCeEEEEc-CC
Confidence 44443 69999999999999998776543333445556888666554 54
No 109
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=30.67 E-value=55 Score=24.67 Aligned_cols=43 Identities=12% Similarity=0.087 Sum_probs=31.7
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......-++..++.|...|++. |+
T Consensus 87 G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~Cv-GE 129 (250)
T 2j27_A 87 GVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACI-GE 129 (250)
T ss_dssp TCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEE-CC
T ss_pred CCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEe-CC
Confidence 69999999999999998776544334455666888666654 54
No 110
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=30.20 E-value=50 Score=25.03 Aligned_cols=43 Identities=12% Similarity=0.178 Sum_probs=31.6
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......-++..++.|...|++ .|+
T Consensus 94 G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~C-vGE 136 (261)
T 1m6j_A 94 QVPYVILGHSERRQIFHESNEQVAEKVKVAIDAGLKVIAC-IGE 136 (261)
T ss_dssp TCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEE-ECC
T ss_pred CCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEE-cCC
Confidence 6999999999999999877654433444556688866665 455
No 111
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=30.15 E-value=1.7e+02 Score=21.87 Aligned_cols=63 Identities=10% Similarity=0.112 Sum_probs=44.0
Q ss_pred ccccccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCcEEeeCHHHHhh
Q 044512 70 LIKQAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWN--HADLIKVSDDEVNF 147 (230)
Q Consensus 70 ~l~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~ 147 (230)
...++|++.+-.- ..+.+.+.++++.+++.|..++++... .+.+...+. .+|++-+|-.++..
T Consensus 120 ~~~GAD~ilLi~a----~l~~~~l~~l~~~a~~lGl~~lvEv~~-----------~eE~~~A~~l~g~~iIGinnr~l~t 184 (251)
T 1i4n_A 120 SSVGADAILIIAR----ILTAEQIKEIYEAAEELGMDSLVEVHS-----------REDLEKVFSVIRPKIIGINTRDLDT 184 (251)
T ss_dssp HHTTCSEEEEEGG----GSCHHHHHHHHHHHHTTTCEEEEEECS-----------HHHHHHHHTTCCCSEEEEECBCTTT
T ss_pred HHcCCCEEEEecc----cCCHHHHHHHHHHHHHcCCeEEEEeCC-----------HHHHHHHHhcCCCCEEEEeCccccc
Confidence 3457888755432 123468899999999999999999873 344555444 59999998876654
No 112
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=29.66 E-value=60 Score=24.70 Aligned_cols=43 Identities=14% Similarity=0.143 Sum_probs=31.6
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......=++..++.|...|++ .|+
T Consensus 92 G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pIlC-vGE 134 (267)
T 3ta6_A 92 GCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVC-IGE 134 (267)
T ss_dssp TCCEEEESCHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEE-ECC
T ss_pred CCCEEEEcchhhccccCCCHHHHHHHHHHHHHCCCeEEEE-eCC
Confidence 7999999999999999887654433345566788866665 455
No 113
>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic, complete proteome, direct protein sequencing, Fe4S4, iron, iron sulfur cluster; HET: 2MD MGD; 2.27A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1fdi_A* 1fdo_A* 1aa6_A*
Probab=29.63 E-value=2.1e+02 Score=24.95 Aligned_cols=43 Identities=14% Similarity=0.080 Sum_probs=24.1
Q ss_pred cccccccEEEEccccccCchHHHHHHHHHHHHHHCCCeE-EEeCCC
Q 044512 69 GLIKQAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLL-SYDPNV 113 (230)
Q Consensus 69 ~~l~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~d~~~ 113 (230)
..+.++|++.+-|--.....+ . ....+..++++|.++ ++||..
T Consensus 162 ~di~~ad~il~~G~n~~~~~p-~-~~~~l~~a~~~G~klividPr~ 205 (715)
T 2iv2_X 162 NEIDNTDLVFVFGYNPADSHP-I-VANHVINAKRNGAKIIVCDPRK 205 (715)
T ss_dssp GGGGGCSEEEEESCCHHHHCH-H-HHHHHHHHHHTTCEEEEECSSC
T ss_pred hHHhcCCEEEEEcCChHHhCH-H-HHHHHHHHHHCCCeEEEEcCCC
Confidence 446788988665532222222 2 234445667788764 678864
No 114
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=29.47 E-value=1e+02 Score=19.00 Aligned_cols=41 Identities=12% Similarity=0.138 Sum_probs=25.5
Q ss_pred HHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEE
Q 044512 9 GHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFM 50 (230)
Q Consensus 9 g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~ 50 (230)
-+.+.+.|++.|+.......... .......+.|++|....+
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel 124 (126)
T 2p25_A 84 IEEVIAFLNEQGIETEPLRVDDF-TGKKMTFFFDPDGLPLEL 124 (126)
T ss_dssp HHHHHHHHHHTTCCCCCCEECTT-TCCEEEEEECTTCCEEEE
T ss_pred HHHHHHHHHHcCCccccccccCC-CCcEEEEEECCCCCEEEe
Confidence 35678999999998754332111 222455567888877654
No 115
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=29.42 E-value=61 Score=24.76 Aligned_cols=43 Identities=21% Similarity=0.193 Sum_probs=31.6
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......=++..++.|...|++ .|+
T Consensus 110 G~~~ViiGHSERR~~f~Etde~v~~Kv~~Al~~GL~pIlC-VGE 152 (271)
T 3krs_A 110 DVDCSLVGHSERRQYYSETDQIVNNKVKKGLENGLKIVLC-IGE 152 (271)
T ss_dssp TCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEE-ECC
T ss_pred CCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCeEEEE-eCC
Confidence 6999999999999999887654433345556688866655 455
No 116
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=28.77 E-value=1.2e+02 Score=19.61 Aligned_cols=43 Identities=9% Similarity=-0.025 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEe
Q 044512 8 FGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFY 52 (230)
Q Consensus 8 ~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~ 52 (230)
.=+.+.+.|++.|+....-.... ..+..+.+.|++|....+..
T Consensus 108 d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~DPdG~~iel~~ 150 (156)
T 3kol_A 108 LFDRAVTVIGENKIAIAHGPVTR--PTGRGVYFYDPDGFMIEIRC 150 (156)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEC---CCEEEEEECTTSCEEEEEE
T ss_pred HHHHHHHHHHHCCCccccCceec--CCccEEEEECCCCCEEEEEe
Confidence 34677899999999864221121 34556777889999887765
No 117
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=28.25 E-value=65 Score=24.59 Aligned_cols=43 Identities=12% Similarity=0.048 Sum_probs=31.3
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.+.....=++..++.|...|++ .|+
T Consensus 112 G~~~VIiGHSERR~~fgEtde~V~~K~~~Al~~GL~pIlC-VGE 154 (272)
T 4g1k_A 112 GAAYAIVGHSERRAYHGESNETVAAKARRALAAGLTPIVC-VGE 154 (272)
T ss_dssp TCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEE-ECC
T ss_pred CCCEEEECchhcccccCCCHHHHHHHHHHHHHCCCeEEEE-eCC
Confidence 7999999999999999877654333334555688866555 455
No 118
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=28.24 E-value=66 Score=24.30 Aligned_cols=43 Identities=21% Similarity=0.179 Sum_probs=31.0
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......=++..++.|...|++ .|+
T Consensus 87 G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~C-vGE 129 (255)
T 1tre_A 87 GAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLC-IGE 129 (255)
T ss_dssp TCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEE-ECC
T ss_pred CCCEEEECccccccccCCCHHHHHHHHHHHHHCCCEEEEE-cCC
Confidence 6999999999999999877654333344555688866655 455
No 119
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=28.16 E-value=42 Score=23.45 Aligned_cols=24 Identities=29% Similarity=0.418 Sum_probs=19.6
Q ss_pred ChhHHHHHHHHHHCCCCccceEec
Q 044512 6 DEFGHMLVNILKQNNVKTEGVCFD 29 (230)
Q Consensus 6 D~~g~~i~~~l~~~gi~~~~i~~~ 29 (230)
|.+|.+|.+.|++.|+++......
T Consensus 39 D~ng~~L~~~L~~~G~~v~~~~iV 62 (178)
T 3iwt_A 39 DESGDIIKQLLIENGHKIIGYSLV 62 (178)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cchHHHHHHHHHHCCCEEEEEEEe
Confidence 899999999999999886544433
No 120
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=27.92 E-value=67 Score=24.56 Aligned_cols=43 Identities=21% Similarity=0.286 Sum_probs=31.2
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......=++..++.|...|++ .|+
T Consensus 112 G~~~VIiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pIlC-VGE 154 (275)
T 3kxq_A 112 GASHVIIGHSERRTVYQESDAIVRAKVQAAWRAGLVALIC-VGE 154 (275)
T ss_dssp TCSEEEESCHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEE-ECC
T ss_pred CCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEE-eCC
Confidence 6999999999999999877654333334555688866555 455
No 121
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=27.78 E-value=65 Score=24.63 Aligned_cols=43 Identities=12% Similarity=0.187 Sum_probs=31.8
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......-++..++.|...|++. |+
T Consensus 106 G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pI~Cv-GE 148 (275)
T 1mo0_A 106 GLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCI-GE 148 (275)
T ss_dssp TCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEE-CC
T ss_pred CCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEc-CC
Confidence 69999999999999998776544344455667888666664 44
No 122
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=27.75 E-value=2.8e+02 Score=23.45 Aligned_cols=123 Identities=12% Similarity=0.079 Sum_probs=63.6
Q ss_pred cccccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCcEEeeCHHHHhhh
Q 044512 71 IKQAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWN--HADLIKVSDDEVNFL 148 (230)
Q Consensus 71 l~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~l 148 (230)
++..|.+.+++....+.. ....+++....+.|+.++.+.... +..+.....+.+..+++ ++.+++|-+-|.+.+
T Consensus 321 ~~~~d~vi~s~~~ipGne--~~~~~~~~~l~~~g~~v~~~~~~~--~h~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~~ 396 (555)
T 3zq4_A 321 INPGDTVVFSSSPIPGNT--ISVSRTINQLYRAGAEVIHGPLND--IHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQ 396 (555)
T ss_dssp CCTTCEEEECSCCCTTCH--HHHHHHHHHHHHTTCEEECSSSSC--CCCCSSCCHHHHHHHHHHSCEEEEEEESBCHHHH
T ss_pred cCCCCEEEEECCCCCCcH--HHHHHHHHHHHHCCCEEEecCCcc--eEEeCCCCHHHHHHHHHHhCCCEEEEcCCCHHHH
Confidence 466788999987555432 234566777788898887632111 11111122444444443 466888888887665
Q ss_pred cCCCCcchHHHHHHHHhcCcc--EEEEEecCCce-EEEecCceeeecCccc--cccCCCCcchH
Q 044512 149 TKGGDAEKDDVVMSLWHDNLK--LLLVTYGAKGC-GYFTKKFKGRVPGFSV--KTIDTTGAGDA 207 (230)
Q Consensus 149 ~~~~~~~~~~~~~~l~~~g~~--~vvvt~g~~g~-~~~~~~~~~~~~~~~~--~~~dt~GaGDa 207 (230)
...++...+.|.+ .+++. ..|- +-+.++........+. -.+|-.|-||.
T Consensus 397 --------~~~~~~a~~~G~~~~~~~~~--~nG~~~~l~~~~~~~~~~v~~g~~~vdg~~~~~~ 450 (555)
T 3zq4_A 397 --------KMHVKLATDCGIPEENCFIM--DNGEVLALKGDEASVAGKIPSGSVYIDGSGIGDI 450 (555)
T ss_dssp --------HHHHHHHHHTTCCGGGBCCC--CTTCEEEEETTEEEECCCCCCCEEEEETTEETCC
T ss_pred --------HHHHHHHHHcCCCcccEEEc--cCCCEEEEeCCCceEecEEeeCCEEEcCCCcccc
Confidence 1233334445652 23332 2232 2244443333222222 36777777775
No 123
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=27.74 E-value=2.3e+02 Score=22.47 Aligned_cols=48 Identities=10% Similarity=0.078 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhh-CcEEeeCHHHHh
Q 044512 88 PCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNH-ADLIKVSDDEVN 146 (230)
Q Consensus 88 ~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~-~dil~~n~~E~~ 146 (230)
.+.+....+.+.+++.|++++-.|-. .+.+..+.++ +|++++--.|+.
T Consensus 88 l~~e~~~~L~~~~~~~Gi~~~st~~d-----------~~svd~l~~~~v~~~KI~S~~~~ 136 (349)
T 2wqp_A 88 LNEEDEIKLKEYVESKGMIFISTLFS-----------RAAALRLQRMDIPAYKIGSGECN 136 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECS-----------HHHHHHHHHHTCSCEEECGGGTT
T ss_pred CCHHHHHHHHHHHHHhCCeEEEeeCC-----------HHHHHHHHhcCCCEEEECccccc
Confidence 35577788888999999998877742 2333333344 788887666654
No 124
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=27.68 E-value=67 Score=24.28 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=31.1
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......=++..++.|...|++. |+
T Consensus 88 G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~Cv-GE 130 (255)
T 1b9b_A 88 GVEYVIVGHSERRRIFKEDDEFINRKVKAVLEKGMTPILCV-GE 130 (255)
T ss_dssp TCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEE-CC
T ss_pred CCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEc-CC
Confidence 69999999999999998776543333445556888666654 54
No 125
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=27.24 E-value=1.2e+02 Score=19.02 Aligned_cols=44 Identities=7% Similarity=-0.099 Sum_probs=27.8
Q ss_pred HHHHHHHHHHCCCCccceEe-cCC-CcceEEEEEEecCCeeeEEEe
Q 044512 9 GHMLVNILKQNNVKTEGVCF-DNH-ARTALAFVTLKKNGEREFMFY 52 (230)
Q Consensus 9 g~~i~~~l~~~gi~~~~i~~-~~~-~~t~~~~v~~~~~g~~~~~~~ 52 (230)
=+.+.+.|++.|+....-.. ... ........+.|++|....+..
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~ 129 (133)
T 3ey7_A 84 LSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVST 129 (133)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEe
Confidence 46778999999998753211 111 011256667888988876653
No 126
>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A
Probab=27.21 E-value=1.2e+02 Score=19.04 Aligned_cols=44 Identities=9% Similarity=-0.020 Sum_probs=27.1
Q ss_pred HHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEe
Q 044512 9 GHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFY 52 (230)
Q Consensus 9 g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~ 52 (230)
-+.+.+.|++.|+....-.............+.|++|....+..
T Consensus 82 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~ 125 (135)
T 1f9z_A 82 AAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 125 (135)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEE
T ss_pred HHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEe
Confidence 36778999999997643211111112234556789998887764
No 127
>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A
Probab=26.97 E-value=1.2e+02 Score=19.71 Aligned_cols=44 Identities=7% Similarity=-0.062 Sum_probs=28.8
Q ss_pred HHHHHHHHHHCCCCccceEe-cCC-CcceEEEEEEecCCeeeEEEe
Q 044512 9 GHMLVNILKQNNVKTEGVCF-DNH-ARTALAFVTLKKNGEREFMFY 52 (230)
Q Consensus 9 g~~i~~~l~~~gi~~~~i~~-~~~-~~t~~~~v~~~~~g~~~~~~~ 52 (230)
-+.+.+.|++.|+....-.. ... ...+....+.|++|....+..
T Consensus 97 l~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~ 142 (152)
T 3huh_A 97 INDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQ 142 (152)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEe
Confidence 47788999999998653111 111 111356667899999988765
No 128
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=26.81 E-value=1.6e+02 Score=21.85 Aligned_cols=91 Identities=12% Similarity=-0.077 Sum_probs=47.2
Q ss_pred CChhHHHHHHHHHHC-CCCccceEecCCCcceEEEEEEecCCeeeEEEecCCCcccccc-ccccCccccccccEEEEcc-
Q 044512 5 DDEFGHMLVNILKQN-NVKTEGVCFDNHARTALAFVTLKKNGEREFMFYRNPSADMLLK-DSELNMGLIKQAKIFHYGS- 81 (230)
Q Consensus 5 ~D~~g~~i~~~l~~~-gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~v~~~~- 81 (230)
....|..+.+.|.+. |.++..+.+....... ....+-. ++.. .+. ++.+ ...+++.|.++...
T Consensus 9 tG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~-----~~~~~v~-~~~~-------D~~d~~~l-~~~~~~~d~vi~~a~ 74 (289)
T 3e48_A 9 TGHLGTHITNQAIANHIDHFHIGVRNVEKVPD-----DWRGKVS-VRQL-------DYFNQESM-VEAFKGMDTVVFIPS 74 (289)
T ss_dssp TSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG-----GGBTTBE-EEEC-------CTTCHHHH-HHHTTTCSEEEECCC
T ss_pred CchHHHHHHHHHhhCCCCcEEEEECCHHHHHH-----hhhCCCE-EEEc-------CCCCHHHH-HHHHhCCCEEEEeCC
Confidence 577899999999998 8777655433221100 0011111 1110 111 1222 34567778765443
Q ss_pred ccccCchHHHHHHHHHHHHHHCCCeEEE
Q 044512 82 ISLISEPCRSAHMAALKAAKDAGVLLSY 109 (230)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 109 (230)
..............+++.+++.+.+.++
T Consensus 75 ~~~~~~~~~~~~~~l~~aa~~~gv~~iv 102 (289)
T 3e48_A 75 IIHPSFKRIPEVENLVYAAKQSGVAHII 102 (289)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCccchhhHHHHHHHHHHHHHcCCCEEE
Confidence 2112222345667888888888865443
No 129
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=26.49 E-value=65 Score=24.36 Aligned_cols=43 Identities=19% Similarity=0.107 Sum_probs=30.8
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......=++..++.|...|++ .|+
T Consensus 89 G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~C-vGE 131 (256)
T 1aw2_A 89 GATHIIIGHSERREYHAESDEFVAKKFAFLKENGLTPVLC-IGE 131 (256)
T ss_dssp TCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEE-ECC
T ss_pred CCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEE-cCC
Confidence 7999999999999999877654333344555688866655 455
No 130
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=26.32 E-value=1.4e+02 Score=19.66 Aligned_cols=40 Identities=10% Similarity=-0.045 Sum_probs=27.3
Q ss_pred HHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEE
Q 044512 10 HMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMF 51 (230)
Q Consensus 10 ~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~ 51 (230)
+...+.|++.|+....-... .+.+....+.|++|+...++
T Consensus 110 da~~~~l~~~Gv~~~~~p~~--~~~g~~~~f~DPdGn~iel~ 149 (155)
T 4g6x_A 110 AAEYERLSALGVRFTQEPTD--MGPVVTAILDDTCGNLIQLM 149 (155)
T ss_dssp HHHHHHHHHTTCCEEEEEEE--CSSCEEEEEECSSSCEEEEE
T ss_pred hhhhhHHhcCCcEEeeCCEE--cCCeEEEEEECCCCCEEEEE
Confidence 56789999999986422122 23456666788999887654
No 131
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=26.18 E-value=1.9e+02 Score=21.78 Aligned_cols=63 Identities=11% Similarity=-0.036 Sum_probs=42.3
Q ss_pred cccccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh-hCcEEeeCHHHHhhh
Q 044512 71 IKQAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWN-HADLIKVSDDEVNFL 148 (230)
Q Consensus 71 l~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~-~~dil~~n~~E~~~l 148 (230)
...+|+|.+= ..-.+.+.+.++++.+++.|.-+++.... .+.+...+. .++++-+|-..+.++
T Consensus 124 ~~GADaILLI----~a~L~~~~l~~l~~~A~~lGl~~LvEVh~-----------~~El~rAl~~~a~iIGINNRnL~tf 187 (258)
T 4a29_A 124 NLGADTVLLI----VKILTERELESLLEYARSYGMEPLILIND-----------ENDLDIALRIGARFIGIMSRDFETG 187 (258)
T ss_dssp HHTCSEEEEE----GGGSCHHHHHHHHHHHHHTTCCCEEEESS-----------HHHHHHHHHTTCSEEEECSBCTTTC
T ss_pred HcCCCeeehH----HhhcCHHHHHHHHHHHHHHhHHHHHhcch-----------HHHHHHHhcCCCcEEEEeCCCcccc
Confidence 3467877432 22224467889999999999888887752 344555444 789998887766544
No 132
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=25.99 E-value=67 Score=23.67 Aligned_cols=52 Identities=4% Similarity=0.080 Sum_probs=31.7
Q ss_pred ccEEEEccccccCchHHHHHHHHHH---HHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCcEE
Q 044512 74 AKIFHYGSISLISEPCRSAHMAALK---AAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWN--HADLI 138 (230)
Q Consensus 74 ~~~v~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~--~~dil 138 (230)
+|++.+..- ...+...+.++ .+++.|.++-++.++.- + .+.+.++++ .+|++
T Consensus 86 Ad~itvH~e-----a~~~~~~~~i~~~~~i~~~G~k~gvalnp~t-----p---~~~~~~~l~~g~~D~V 142 (227)
T 1tqx_A 86 SNQLTFHFE-----ALNEDTERCIQLAKEIRDNNLWCGISIKPKT-----D---VQKLVPILDTNLINTV 142 (227)
T ss_dssp SSEEEEEGG-----GGTTCHHHHHHHHHHHHTTTCEEEEEECTTS-----C---GGGGHHHHTTTCCSEE
T ss_pred CCEEEEeec-----CCccCHHHHHHHHHHHHHcCCeEEEEeCCCC-----c---HHHHHHHhhcCCcCEE
Confidence 888744332 22213456666 88899988766664321 1 345667777 78988
No 133
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=25.72 E-value=68 Score=24.17 Aligned_cols=43 Identities=12% Similarity=0.196 Sum_probs=31.0
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.+++++++++|-+.++++.......=++..++.|...|++. |+
T Consensus 86 G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~Cv-GE 128 (252)
T 2btm_A 86 GVTYVILGHSERRQMFAETDETVNKKVLAAFTRGLIPIICC-GE 128 (252)
T ss_dssp TCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEE-CC
T ss_pred CCCEEEeCchhcccccCCCHHHHHHHHHHHHHCCCEEEEEc-CC
Confidence 79999999999999998776543333445556888666654 54
No 134
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=25.42 E-value=75 Score=24.77 Aligned_cols=43 Identities=12% Similarity=0.152 Sum_probs=31.7
Q ss_pred hCcEEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecC
Q 044512 134 HADLIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGA 177 (230)
Q Consensus 134 ~~dil~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~ 177 (230)
.++++.++++|-+.++++.+.....-++...+.|...|++. |+
T Consensus 140 G~~~ViiGHSERR~~f~Etde~V~~Kv~aAl~~GL~pIvCV-GE 182 (310)
T 3s6d_A 140 NVSIVELGHAERRAIFGETDQQVARKAAAAADQGLIPLVCI-GE 182 (310)
T ss_dssp TCCEEEESCHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEE-CC
T ss_pred CCCEEEecccccccccCCCHHHHHHHHHHHHHCCCEEEEEe-CC
Confidence 69999999999999998876554333445566888666654 44
No 135
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=25.34 E-value=2.5e+02 Score=22.31 Aligned_cols=48 Identities=15% Similarity=0.149 Sum_probs=31.7
Q ss_pred hHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhh-CcEEeeCHHHHh
Q 044512 88 PCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNH-ADLIKVSDDEVN 146 (230)
Q Consensus 88 ~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~-~dil~~n~~E~~ 146 (230)
.+.+....+.+.+++.|++++-.|-. .+.+..+.++ +|++++--.|+.
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~fD-----------~~svd~l~~~~v~~~KI~S~~~~ 123 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTPFD-----------EESVDLIEAHGIEIIKIASCSFT 123 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECS-----------HHHHHHHHHTTCCEEEECSSSTT
T ss_pred CCHHHHHHHHHHHHHcCCcEEeccCC-----------HHHHHHHHHcCCCEEEECccccc
Confidence 35577788888999999998877642 2333333444 888887554443
No 136
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=24.78 E-value=1.3e+02 Score=19.82 Aligned_cols=42 Identities=10% Similarity=-0.050 Sum_probs=29.0
Q ss_pred HHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEe
Q 044512 9 GHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFY 52 (230)
Q Consensus 9 g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~ 52 (230)
-+.+.+.|++.|+....-.. ..+.+..+.+.|++|....+..
T Consensus 76 ~d~~~~~l~~~G~~v~~~p~--~~~~G~~~~~~DPdG~~iel~~ 117 (144)
T 3r6a_A 76 LDKFKTFLEENGAEIIRGPS--KVPTGRNMTVRHSDGSVIEYVE 117 (144)
T ss_dssp HHHHHHHHHHTTCEEEEEEE--EETTEEEEEEECTTSCEEEEEE
T ss_pred HHHHHHHHHHcCCEEecCCc--cCCCceEEEEECCCCCEEEEEE
Confidence 36678999999997542211 1234567778899999887764
No 137
>3tqn_A Transcriptional regulator, GNTR family; regulatory functions; 2.80A {Coxiella burnetii}
Probab=24.44 E-value=1.1e+02 Score=19.44 Aligned_cols=44 Identities=14% Similarity=-0.013 Sum_probs=33.6
Q ss_pred EeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecCCceEEEe
Q 044512 138 IKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGAKGCGYFT 184 (230)
Q Consensus 138 l~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~~g~~~~~ 184 (230)
-.|++.|+...+|....+..++++.|...|. |.+...+|.++..
T Consensus 32 ~lPs~~~La~~~~vSr~tvr~al~~L~~~Gl---i~~~~~~G~~V~~ 75 (113)
T 3tqn_A 32 MIPSIRKISTEYQINPLTVSKAYQSLLDDNV---IEKRRGLGMLVKA 75 (113)
T ss_dssp EECCHHHHHHHHTCCHHHHHHHHHHHHHTTS---EEEETTTEEEECT
T ss_pred cCcCHHHHHHHHCcCHHHHHHHHHHHHHCCC---EEEecCCeEEEeC
Confidence 3468999999999988888889999998886 4444456776654
No 138
>2wgo_A Ranaspumin-2, RSN-2; cystatin fold, surfactant protein; NMR {Engystomops pustulosus}
Probab=24.05 E-value=1e+02 Score=18.09 Aligned_cols=46 Identities=20% Similarity=0.333 Sum_probs=29.6
Q ss_pred CCChhHHHHHHHHH-----HCCCCccceEecC-CCcceEEEEEEec-CCeeeE
Q 044512 4 GDDEFGHMLVNILK-----QNNVKTEGVCFDN-HARTALAFVTLKK-NGEREF 49 (230)
Q Consensus 4 G~D~~g~~i~~~l~-----~~gi~~~~i~~~~-~~~t~~~~v~~~~-~g~~~~ 49 (230)
=+..+|+.+++.++ +.|+++..+.+.+ +....++++.++. +|+..-
T Consensus 19 idnlfgkelldkfqddikdkygvdtkdlkilktsedkrfyyvsvdagdgekck 71 (98)
T 2wgo_A 19 IDNLFGKELLDKFQDDIKDKYGVDTKDLKILKTSEDKRFYYVSVDAGDGEKCK 71 (98)
T ss_dssp BCHHHHHHHHHHSHHHHHHHTCCCTTTCEEEEEEECSSEEEEEEECSSSCEEE
T ss_pred hhhhhhHHHHHHHHHhhhhhhCCCccceeeeeccCCceEEEEEEecCCCceee
Confidence 35567888877665 5899998765433 2245677777774 555543
No 139
>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}
Probab=23.95 E-value=1.6e+02 Score=19.50 Aligned_cols=44 Identities=5% Similarity=-0.191 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEe
Q 044512 7 EFGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFY 52 (230)
Q Consensus 7 ~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~ 52 (230)
..-+.+.+.|++.|+....-... ...+....+.|++|....+..
T Consensus 88 ~dld~~~~~l~~~G~~~~~~~~~--~~g~~~~~~~DPdG~~iel~~ 131 (160)
T 3r4q_A 88 AEVDEWKTRFEALEIPVEHYHRW--PNGSYSVYIRDPAGNSVEVGE 131 (160)
T ss_dssp HHHHHHHHHHHTTTCCCCEEEEC--TTSCEEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEeccccc--cCCcEEEEEECCCCCEEEEEe
Confidence 34577889999999987632211 124667778899999987765
No 140
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=23.60 E-value=63 Score=26.27 Aligned_cols=25 Identities=16% Similarity=0.296 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCCC
Q 044512 90 RSAHMAALKAAKDAGVLLSYDPNVR 114 (230)
Q Consensus 90 ~~~~~~~l~~~~~~~~~~~~d~~~~ 114 (230)
.+...++++.|+++|++|++|....
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V~N 93 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLPIH 93 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4778999999999999999999753
No 141
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=23.37 E-value=71 Score=26.39 Aligned_cols=24 Identities=21% Similarity=0.191 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCC
Q 044512 90 RSAHMAALKAAKDAGVLLSYDPNV 113 (230)
Q Consensus 90 ~~~~~~~l~~~~~~~~~~~~d~~~ 113 (230)
.+...++++.|+++|++|++|...
T Consensus 102 ~~df~~Lv~~aH~~Gi~VilD~V~ 125 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNIKVVLDGVF 125 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478899999999999999999864
No 142
>3uh9_A Metallothiol transferase FOSB 2; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol; HET: MSE; 1.60A {Bacillus anthracis}
Probab=23.33 E-value=1.2e+02 Score=19.51 Aligned_cols=44 Identities=16% Similarity=0.034 Sum_probs=29.0
Q ss_pred hHHHHHHHHHHCCCCccceEecCCCcceEEEEEEecCCeeeEEEe
Q 044512 8 FGHMLVNILKQNNVKTEGVCFDNHARTALAFVTLKKNGEREFMFY 52 (230)
Q Consensus 8 ~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~v~~~~~g~~~~~~~ 52 (230)
.=+.+.+.|++.|+....-.. .....+....+.|++|....+..
T Consensus 75 d~~~~~~~l~~~G~~~~~~~~-~~~~~~~~~~~~DPdG~~iel~~ 118 (145)
T 3uh9_A 75 ALDHLKEVLIQNDVNILPGRE-RDERDQRSLYFTDPDGHKFEFHT 118 (145)
T ss_dssp HHHHHHHHHHHTTCCBCCCCC-CCGGGCCEEEEECTTCCEEEEES
T ss_pred HHHHHHHHHHHCCCeEecCCc-cCCCCeeEEEEEcCCCCEEEEEc
Confidence 346778999999998642211 12234556667889998887764
No 143
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=23.30 E-value=61 Score=26.75 Aligned_cols=24 Identities=29% Similarity=0.304 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCC
Q 044512 90 RSAHMAALKAAKDAGVLLSYDPNV 113 (230)
Q Consensus 90 ~~~~~~~l~~~~~~~~~~~~d~~~ 113 (230)
.+...++++.|+++|++|++|...
T Consensus 82 ~~df~~Lv~~aH~~Gi~VilD~V~ 105 (485)
T 1wpc_A 82 RSQLQAAVTSLKNNGIQVYGDVVM 105 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEec
Confidence 477899999999999999999864
No 144
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=23.30 E-value=61 Score=26.70 Aligned_cols=24 Identities=13% Similarity=0.070 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCC
Q 044512 90 RSAHMAALKAAKDAGVLLSYDPNV 113 (230)
Q Consensus 90 ~~~~~~~l~~~~~~~~~~~~d~~~ 113 (230)
.+...++++.|+++|++|++|...
T Consensus 80 ~~df~~lv~~aH~~Gi~VilD~V~ 103 (480)
T 1ud2_A 80 KAQLERAIGSLKSNDINVYGDVVM 103 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcc
Confidence 477899999999999999999864
No 145
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=23.17 E-value=71 Score=26.37 Aligned_cols=25 Identities=16% Similarity=0.204 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCCC
Q 044512 90 RSAHMAALKAAKDAGVLLSYDPNVR 114 (230)
Q Consensus 90 ~~~~~~~l~~~~~~~~~~~~d~~~~ 114 (230)
.+.+.++++.|+++|++|++|....
T Consensus 81 ~~d~~~Lv~~aH~~Gi~VilD~V~N 105 (488)
T 1wza_A 81 LEDFHKLVEAAHQRGIKVIIDLPIN 105 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccc
Confidence 4778999999999999999999753
No 146
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=23.05 E-value=62 Score=26.68 Aligned_cols=24 Identities=17% Similarity=0.097 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCC
Q 044512 90 RSAHMAALKAAKDAGVLLSYDPNV 113 (230)
Q Consensus 90 ~~~~~~~l~~~~~~~~~~~~d~~~ 113 (230)
.+...++++.|+++|++|++|...
T Consensus 78 ~~df~~lv~~aH~~Gi~VilD~V~ 101 (483)
T 3bh4_A 78 KSELQDAIGSLHSRNVQVYGDVVL 101 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcc
Confidence 477899999999999999999864
No 147
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=22.96 E-value=61 Score=27.00 Aligned_cols=24 Identities=17% Similarity=0.119 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCC
Q 044512 90 RSAHMAALKAAKDAGVLLSYDPNV 113 (230)
Q Consensus 90 ~~~~~~~l~~~~~~~~~~~~d~~~ 113 (230)
.+...++++.|+++|++|++|..+
T Consensus 79 ~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 79 MADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECc
Confidence 367899999999999999999864
No 148
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} PDB: 3v75_A*
Probab=22.94 E-value=2.6e+02 Score=21.42 Aligned_cols=48 Identities=17% Similarity=0.166 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh-----hCcEEeeCH
Q 044512 91 SAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWN-----HADLIKVSD 142 (230)
Q Consensus 91 ~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~-----~~dil~~n~ 142 (230)
..+.++++.+++.|.++++|... .+-+.........++. .+|.++++.
T Consensus 82 ~~l~~~i~~l~~~g~~VflDlK~----~DIpnTv~~ya~~~~~~~~~lg~D~vTvh~ 134 (284)
T 3l52_A 82 AVLEKTVAEARAAGALVVMDAKR----GDIGSTMAAYAEAFLRKDSPLFSDALTVSP 134 (284)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEE----CCCHHHHHHHHHHHSSTTSTTCCSEEEECC
T ss_pred HHHHHHHHHHHHCCCcEEEEecc----cCcHHHHHHHHHHHhccccccCCcEEEEec
Confidence 46677888888999999999863 1224444455555553 489999865
No 149
>2b0l_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, winged HTH motif.; 2.90A {Bacillus subtilis} SCOP: a.4.5.66
Probab=22.75 E-value=1.5e+02 Score=18.53 Aligned_cols=47 Identities=9% Similarity=-0.125 Sum_probs=34.9
Q ss_pred EEeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEe-cCCceEEEec
Q 044512 137 LIKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTY-GAKGCGYFTK 185 (230)
Q Consensus 137 il~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~-g~~g~~~~~~ 185 (230)
-..|+..|+...+|....+...+++.|.+.|. |.... |.+|..+...
T Consensus 41 ~~lps~~eLa~~lgVSr~tVr~al~~L~~~Gl--I~~~~gG~~G~~V~~~ 88 (102)
T 2b0l_A 41 EGLLVASKIADRVGITRSVIVNALRKLESAGV--IESRSLGMKGTYIKVL 88 (102)
T ss_dssp EEEECHHHHHHHHTCCHHHHHHHHHHHHHTTS--EEEEECSSSCEEEEEC
T ss_pred CcCCCHHHHHHHHCcCHHHHHHHHHHHHHCCC--EEEEeCCCCcEEEecC
Confidence 34479999999999888888888999988886 33344 3478777543
No 150
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=22.40 E-value=45 Score=20.32 Aligned_cols=21 Identities=10% Similarity=0.241 Sum_probs=18.4
Q ss_pred CCCChhHHHHHHHHHHCCCCc
Q 044512 3 FGDDEFGHMLVNILKQNNVKT 23 (230)
Q Consensus 3 vG~D~~g~~i~~~l~~~gi~~ 23 (230)
=|.|..++.|++.-+++||.+
T Consensus 23 KG~~~~A~~I~~~A~e~~VPi 43 (83)
T 3bzy_B 23 TGKDAKALQIIKLAELYDIPV 43 (83)
T ss_dssp EEETHHHHHHHHHHHHTTCCE
T ss_pred EeCcHHHHHHHHHHHHcCCCE
Confidence 478899999999999999974
No 151
>4gh9_A Polymerase cofactor VP35; viral polymerase, interferon inhibition, double stranded VIR viral protein,RNA binding protein; 1.65A {Marburg virus}
Probab=22.29 E-value=54 Score=21.58 Aligned_cols=26 Identities=19% Similarity=0.320 Sum_probs=22.1
Q ss_pred CCCcchHHHHHHHHHHHcCCCccccc
Q 044512 201 TTGAGDAFVGSFLVSVAKDANIFNVK 226 (230)
Q Consensus 201 t~GaGDaf~ag~~~~l~~g~~~~~a~ 226 (230)
-.|.-|+|.+.|=+.|+.|.+++-|-
T Consensus 58 d~~~~~~i~~~f~asLaeGdspQcAL 83 (146)
T 4gh9_A 58 KSGKSGAFLDAFHQILSEGENAQAAL 83 (146)
T ss_dssp HTTCHHHHHHHHHHHHHTTCCHHHHH
T ss_pred ccCchhHHHHHHHHHHhcCCCcchhh
Confidence 45889999999999999998887653
No 152
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=22.10 E-value=1.5e+02 Score=23.15 Aligned_cols=25 Identities=24% Similarity=0.151 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHHHHCCCeEEEeCC
Q 044512 88 PCRSAHMAALKAAKDAGVLLSYDPN 112 (230)
Q Consensus 88 ~~~~~~~~~l~~~~~~~~~~~~d~~ 112 (230)
.+.+...++++.+++.|+.+++|+-
T Consensus 57 ~d~~~~~~~~~~ak~~Gl~v~ld~h 81 (334)
T 1fob_A 57 YDLDYNLELAKRVKAAGMSLYLDLH 81 (334)
T ss_dssp TCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3457788899999999999999853
No 153
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=22.09 E-value=82 Score=25.56 Aligned_cols=24 Identities=17% Similarity=0.198 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCC
Q 044512 90 RSAHMAALKAAKDAGVLLSYDPNV 113 (230)
Q Consensus 90 ~~~~~~~l~~~~~~~~~~~~d~~~ 113 (230)
.+...++++.|+++|++|++|...
T Consensus 81 ~~d~~~lv~~ah~~Gi~vilD~V~ 104 (424)
T 2dh2_A 81 KEDFDSLLQSAKKKSIRVILDLTP 104 (424)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEECC
Confidence 477899999999999999999964
No 154
>2ek5_A Predicted transcriptional regulators; helix-turn-helix, interwined alpha helices; 2.20A {Corynebacterium glutamicum atcc 13032} PDB: 2du9_A
Probab=22.09 E-value=1.3e+02 Score=19.75 Aligned_cols=43 Identities=14% Similarity=0.026 Sum_probs=31.6
Q ss_pred eeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecCCceEEEe
Q 044512 139 KVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGAKGCGYFT 184 (230)
Q Consensus 139 ~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~~g~~~~~ 184 (230)
.|++.++...+|....+..++++.|...|. |.+...+|..+..
T Consensus 28 LPse~~La~~~gvSr~tVr~Al~~L~~~Gl---i~~~~g~G~~V~~ 70 (129)
T 2ek5_A 28 VPSTNELAAFHRINPATARNGLTLLVEAGI---LYKKRGIGMFVSA 70 (129)
T ss_dssp BCCHHHHHHHTTCCHHHHHHHHHHHHTTTS---EEEETTTEEEECT
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHHHHHCCc---EEEecCCEEEEec
Confidence 358889999999888777889999988885 4444445766643
No 155
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=22.04 E-value=67 Score=26.84 Aligned_cols=24 Identities=25% Similarity=0.325 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCC
Q 044512 90 RSAHMAALKAAKDAGVLLSYDPNV 113 (230)
Q Consensus 90 ~~~~~~~l~~~~~~~~~~~~d~~~ 113 (230)
.+...++++.|+++|++|++|...
T Consensus 81 ~~dfk~Lv~~aH~~Gi~VilD~V~ 104 (515)
T 1hvx_A 81 KAQYLQAIQAAHAAGMQVYADVVF 104 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEec
Confidence 477899999999999999999864
No 156
>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*
Probab=21.95 E-value=2.6e+02 Score=21.01 Aligned_cols=43 Identities=14% Similarity=0.081 Sum_probs=28.4
Q ss_pred HHHHHHHHHCCCCccc-eEecCCCcceEEEEEEecCCeeeEEEec
Q 044512 10 HMLVNILKQNNVKTEG-VCFDNHARTALAFVTLKKNGEREFMFYR 53 (230)
Q Consensus 10 ~~i~~~l~~~gi~~~~-i~~~~~~~t~~~~v~~~~~g~~~~~~~~ 53 (230)
....+.|++.|+.... .... .....+.+.+.|++|.+..+.+.
T Consensus 228 ~~~~~~l~~~G~~~~~~p~~~-~~~~~~~~y~~DPdG~~iE~~~~ 271 (309)
T 3hpy_A 228 LRAGDIMSMNEVNVDIGPTRH-GVTRGCTIYAWDPSGNRFETFMG 271 (309)
T ss_dssp HHHHHHHHHTTCCBSSCSEEC-SSSSEEEEEEECTTSCEEEEEEE
T ss_pred HHHHHHHHHCCCEEEeCCccC-CCCccEEEEEECCCCCEEEEEeC
Confidence 3457889999998652 2211 21234566678999999988764
No 157
>3by6_A Predicted transcriptional regulator; structural genomics, PSI-2, MCSG, structure initiative, midwest center for structural genomic binding; 2.20A {Oenococcus oeni}
Probab=21.94 E-value=1.3e+02 Score=19.65 Aligned_cols=44 Identities=16% Similarity=-0.034 Sum_probs=33.0
Q ss_pred EeeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecCCceEEEe
Q 044512 138 IKVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGAKGCGYFT 184 (230)
Q Consensus 138 l~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~~g~~~~~ 184 (230)
-.|++.|+...+|....+..++++.|...|. |.+...+|..+..
T Consensus 34 ~lPse~~La~~~~vSr~tvr~Al~~L~~~Gl---i~~~~g~G~~V~~ 77 (126)
T 3by6_A 34 QLPSVRETALQEKINPNTVAKAYKELEAQKV---IRTIPGKGTFITG 77 (126)
T ss_dssp EECCHHHHHHHHTCCHHHHHHHHHHHHHTTS---EEEETTTEEEECS
T ss_pred cCcCHHHHHHHHCcCHHHHHHHHHHHHHCCC---EEEecCCeEEEcc
Confidence 4568999999999888888889999988885 4444445766643
No 158
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=21.72 E-value=68 Score=26.16 Aligned_cols=23 Identities=22% Similarity=0.281 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCC
Q 044512 90 RSAHMAALKAAKDAGVLLSYDPN 112 (230)
Q Consensus 90 ~~~~~~~l~~~~~~~~~~~~d~~ 112 (230)
.+...++++.|+++|++|++|..
T Consensus 64 ~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 64 RAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEe
Confidence 47789999999999999999874
No 159
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=21.26 E-value=31 Score=24.76 Aligned_cols=20 Identities=25% Similarity=0.140 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHCCCeEEEe
Q 044512 91 SAHMAALKAAKDAGVLLSYD 110 (230)
Q Consensus 91 ~~~~~~l~~~~~~~~~~~~d 110 (230)
+.+.++++.+++.|+++++-
T Consensus 39 ~~i~~l~~~ar~~g~pVi~~ 58 (198)
T 3mcw_A 39 QACAGLLQAWRARGLPLIHI 58 (198)
T ss_dssp HHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEE
Confidence 56788899999999998873
No 160
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=21.23 E-value=73 Score=25.94 Aligned_cols=24 Identities=13% Similarity=0.216 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCC
Q 044512 90 RSAHMAALKAAKDAGVLLSYDPNV 113 (230)
Q Consensus 90 ~~~~~~~l~~~~~~~~~~~~d~~~ 113 (230)
.+...++++.++++|++|++|...
T Consensus 86 ~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 86 KEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECc
Confidence 477899999999999999999854
No 161
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=21.20 E-value=59 Score=20.01 Aligned_cols=23 Identities=17% Similarity=0.224 Sum_probs=18.4
Q ss_pred hhHHHHHHHHHHCCCCccceEec
Q 044512 7 EFGHMLVNILKQNNVKTEGVCFD 29 (230)
Q Consensus 7 ~~g~~i~~~l~~~gi~~~~i~~~ 29 (230)
++....++.|++.||+...+.+.
T Consensus 15 p~C~~aK~~L~~~gi~y~~idi~ 37 (92)
T 2lqo_A 15 GYCLRLKTALTANRIAYDEVDIE 37 (92)
T ss_dssp SSHHHHHHHHHHTTCCCEEEETT
T ss_pred HhHHHHHHHHHhcCCceEEEEcC
Confidence 47889999999999987765543
No 162
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=21.09 E-value=74 Score=25.55 Aligned_cols=24 Identities=17% Similarity=0.093 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCC
Q 044512 90 RSAHMAALKAAKDAGVLLSYDPNV 113 (230)
Q Consensus 90 ~~~~~~~l~~~~~~~~~~~~d~~~ 113 (230)
.+.+.++++.++++|+.|++|...
T Consensus 68 ~~d~~~lv~~~h~~Gi~VilD~V~ 91 (405)
T 1ht6_A 68 AAELKSLIGALHGKGVQAIADIVI 91 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECc
Confidence 477899999999999999998753
No 163
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=21.05 E-value=3e+02 Score=21.47 Aligned_cols=51 Identities=10% Similarity=0.154 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCCCCC--C-CCCHHHHHHHHHHHhh--hCcEEee
Q 044512 90 RSAHMAALKAAKDAGVLLSYDPNVRLP--L-WPSQDAARDGIKSIWN--HADLIKV 140 (230)
Q Consensus 90 ~~~~~~~l~~~~~~~~~~~~d~~~~~~--~-~~~~~~~~~~~~~~l~--~~dil~~ 140 (230)
.+.+.+.++..++.|..+.+.+..... + -.++++-.+.+.+++. .++.|.+
T Consensus 29 ~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~ 84 (331)
T 4e5s_A 29 TENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILT 84 (331)
T ss_dssp HHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEE
Confidence 567777888888899999987753221 1 1235555666666664 4555554
No 164
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=20.95 E-value=73 Score=26.19 Aligned_cols=24 Identities=21% Similarity=0.140 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCC
Q 044512 90 RSAHMAALKAAKDAGVLLSYDPNV 113 (230)
Q Consensus 90 ~~~~~~~l~~~~~~~~~~~~d~~~ 113 (230)
.+...++++.|+++|+.|++|...
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~ 120 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVVA 120 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECc
Confidence 477899999999999999999864
No 165
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=20.83 E-value=81 Score=20.45 Aligned_cols=25 Identities=12% Similarity=0.042 Sum_probs=18.4
Q ss_pred hhHHHHHHHHHHCCCCccceEecCC
Q 044512 7 EFGHMLVNILKQNNVKTEGVCFDNH 31 (230)
Q Consensus 7 ~~g~~i~~~l~~~gi~~~~i~~~~~ 31 (230)
..++..+.+|++.||+.+.+.+..+
T Consensus 15 ~~c~ka~~~L~~~gi~~~~~di~~~ 39 (120)
T 3gkx_A 15 STCQKAKKWLIENNIEYTNRLIVDD 39 (120)
T ss_dssp HHHHHHHHHHHHTTCCCEEEETTTT
T ss_pred hHHHHHHHHHHHcCCceEEEecccC
Confidence 3678888999999998776655443
No 166
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=20.69 E-value=3e+02 Score=21.31 Aligned_cols=69 Identities=10% Similarity=0.016 Sum_probs=36.3
Q ss_pred ccccccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCC---CCCCHHHHHHHHHHHhh--hCcEEee
Q 044512 70 LIKQAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLP---LWPSQDAARDGIKSIWN--HADLIKV 140 (230)
Q Consensus 70 ~l~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---~~~~~~~~~~~~~~~l~--~~dil~~ 140 (230)
.++..|.|.+-. .-+....+...+.++..++.|..+.+.+..... +-.++++-.+.+.+++. .++.|.+
T Consensus 13 ~L~~Gd~I~iva--PSs~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~ 86 (311)
T 1zl0_A 13 WQPIDGRVALIA--PASAIATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWC 86 (311)
T ss_dssp CCCCCSEEEEEC--CSBCCCHHHHHHHHHHHHHTTCCEEECTTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEE
T ss_pred cCCCcCEEEEEe--CCCCCCHHHHHHHHHHHHhCCCEEEECccccccccccCCCHHHHHHHHHHHHhCCCCCEEEE
Confidence 345555443322 222223466677888888899999887653221 11134444555555553 3344443
No 167
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=20.67 E-value=74 Score=26.68 Aligned_cols=24 Identities=29% Similarity=0.210 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCC
Q 044512 90 RSAHMAALKAAKDAGVLLSYDPNV 113 (230)
Q Consensus 90 ~~~~~~~l~~~~~~~~~~~~d~~~ 113 (230)
.+.+.++++.++++|++|++|...
T Consensus 92 ~~dfk~Lv~~aH~~GI~VilD~V~ 115 (527)
T 1gcy_A 92 DAQLRQAASALGGAGVKVLYDVVP 115 (527)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEee
Confidence 478899999999999999999853
No 168
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=20.64 E-value=1.8e+02 Score=18.82 Aligned_cols=43 Identities=9% Similarity=-0.053 Sum_probs=26.8
Q ss_pred HHHHHHHHHHCCCCccceEec-C-CCcceEEEEEEecCCeeeEEE
Q 044512 9 GHMLVNILKQNNVKTEGVCFD-N-HARTALAFVTLKKNGEREFMF 51 (230)
Q Consensus 9 g~~i~~~l~~~gi~~~~i~~~-~-~~~t~~~~v~~~~~g~~~~~~ 51 (230)
=+.+.+.|++.|+....-... . .........+.|++|....+.
T Consensus 101 l~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~ 145 (147)
T 3zw5_A 101 LEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVS 145 (147)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEe
Confidence 477889999999987521111 1 111224566778898887553
No 169
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=20.49 E-value=2.1e+02 Score=19.55 Aligned_cols=92 Identities=8% Similarity=-0.098 Sum_probs=46.4
Q ss_pred cccccccEEEEccccccCchHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEee-CHHHHhh
Q 044512 69 GLIKQAKIFHYGSISLISEPCRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIKV-SDDEVNF 147 (230)
Q Consensus 69 ~~l~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~~-n~~E~~~ 147 (230)
+.+.+++-+++-|. +.+.-....+.....+.|.++.+-... ...... ....+..-|++++ +.
T Consensus 34 ~~i~~a~~I~i~G~----G~S~~~a~~~~~~l~~~g~~~~~~~~~-------~~~~~~-~~~~~~~~d~~i~iS~----- 96 (187)
T 3sho_A 34 EAICRADHVIVVGM----GFSAAVAVFLGHGLNSLGIRTTVLTEG-------GSTLTI-TLANLRPTDLMIGVSV----- 96 (187)
T ss_dssp HHHHHCSEEEEECC----GGGHHHHHHHHHHHHHTTCCEEEECCC-------THHHHH-HHHTCCTTEEEEEECC-----
T ss_pred HHHHhCCEEEEEec----CchHHHHHHHHHHHHhcCCCEEEecCC-------chhHHH-HHhcCCCCCEEEEEeC-----
Confidence 34566777777664 223334444444445667766543310 111111 1223333444432 21
Q ss_pred hcCCCCcchHHHHHHHHhcCccEEEEEecCCc
Q 044512 148 LTKGGDAEKDDVVMSLWHDNLKLLLVTYGAKG 179 (230)
Q Consensus 148 l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~~g 179 (230)
.|.. .+.-++++..++.|++.+.||..+..
T Consensus 97 -sG~t-~~~~~~~~~ak~~g~~vi~IT~~~~s 126 (187)
T 3sho_A 97 -WRYL-RDTVAALAGAAERGVPTMALTDSSVS 126 (187)
T ss_dssp -SSCC-HHHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred -CCCC-HHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 1111 12235678888899999999976543
No 170
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=20.47 E-value=2.8e+02 Score=20.82 Aligned_cols=61 Identities=15% Similarity=0.144 Sum_probs=36.4
Q ss_pred ccccEEEEccccccCchHHHHHHHHHHHHHHC-CCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCcEEe-eC
Q 044512 72 KQAKIFHYGSISLISEPCRSAHMAALKAAKDA-GVLLSYDPNVRLPLWPSQDAARDGIKSIWNHADLIK-VS 141 (230)
Q Consensus 72 ~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~dil~-~n 141 (230)
..+|++-+++- .......+.+.+++...++. +.++++|... ++..+..+... ...+++- +|
T Consensus 37 ~GAdiIDIg~g-~~~v~~~ee~~rvv~~i~~~~~~pisIDT~~-------~~v~~aAl~a~-~Ga~iINdvs 99 (262)
T 1f6y_A 37 GGARALDLNVG-PAVQDKVSAMEWLVEVTQEVSNLTLCLDSTN-------IKAIEAGLKKC-KNRAMINSTN 99 (262)
T ss_dssp HTCSEEEEBCC-----CHHHHHHHHHHHHHTTCCSEEEEECSC-------HHHHHHHHHHC-SSCEEEEEEC
T ss_pred CCCcEEEECCC-CCCCChHHHHHHHHHHHHHhCCCeEEEeCCC-------HHHHHHHHhhC-CCCCEEEECC
Confidence 46899988873 22223457777888777765 7899999862 33232222221 3577775 66
No 171
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=20.11 E-value=2.4e+02 Score=22.71 Aligned_cols=76 Identities=11% Similarity=0.097 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhh-CcEEeeCHHHHhhh------c--CCC------C
Q 044512 89 CRSAHMAALKAAKDAGVLLSYDPNVRLPLWPSQDAARDGIKSIWNH-ADLIKVSDDEVNFL------T--KGG------D 153 (230)
Q Consensus 89 ~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~-~dil~~n~~E~~~l------~--~~~------~ 153 (230)
+.+....+.+.+++.|++++-.|-. .+.+..+.++ +|++++--.|+..+ . |.+ .
T Consensus 99 ~~e~~~~L~~~~~~~Gi~~~stpfD-----------~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGm 167 (385)
T 1vli_A 99 PAEWILPLLDYCREKQVIFLSTVCD-----------EGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAG 167 (385)
T ss_dssp CGGGHHHHHHHHHHTTCEEECBCCS-----------HHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTT
T ss_pred CHHHHHHHHHHHHHcCCcEEEccCC-----------HHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCC
Confidence 4466678888899999988866641 2333334444 88888766665432 1 111 1
Q ss_pred cc---hHHHHHHHHhcCccEEEEEe
Q 044512 154 AE---KDDVVMSLWHDNLKLLLVTY 175 (230)
Q Consensus 154 ~~---~~~~~~~l~~~g~~~vvvt~ 175 (230)
.+ ...+++.+...|...|++-.
T Consensus 168 aTl~Ei~~Ave~i~~~Gn~~iiLlh 192 (385)
T 1vli_A 168 AEISDVHEAWRTIRAEGNNQIAIMH 192 (385)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCcEEEEe
Confidence 12 24566777777775555544
No 172
>3neu_A LIN1836 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; 1.58A {Listeria innocua}
Probab=20.08 E-value=1.4e+02 Score=19.25 Aligned_cols=43 Identities=9% Similarity=-0.089 Sum_probs=32.3
Q ss_pred eeCHHHHhhhcCCCCcchHHHHHHHHhcCccEEEEEecCCceEEEe
Q 044512 139 KVSDDEVNFLTKGGDAEKDDVVMSLWHDNLKLLLVTYGAKGCGYFT 184 (230)
Q Consensus 139 ~~n~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~g~~g~~~~~ 184 (230)
.|++.|+...+|....+..++++.|...|. |.+...+|.++..
T Consensus 37 Lps~~~La~~~~vSr~tvr~Al~~L~~~G~---i~~~~g~G~~V~~ 79 (125)
T 3neu_A 37 LPSVREMGVKLAVNPNTVSRAYQELERAGY---IYAKRGMGSFVTS 79 (125)
T ss_dssp CCCHHHHHHHHTCCHHHHHHHHHHHHHTTS---EEEETTTEEEECC
T ss_pred CCCHHHHHHHHCcCHHHHHHHHHHHHHCCe---EEEecCCEEEEec
Confidence 467889999999888888889999988885 4444446766653
Done!