Query 044513
Match_columns 457
No_of_seqs 174 out of 1308
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 06:25:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044513.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044513hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 1.7E-75 5.8E-80 615.4 33.1 428 17-457 1-458 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 5.8E-75 2E-79 612.9 33.7 436 17-457 1-447 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 1.4E-60 4.7E-65 522.9 34.3 394 22-457 2-447 (926)
4 3afg_A Subtilisin-like serine 100.0 1.5E-53 5.1E-58 441.5 26.7 274 1-457 98-391 (539)
5 1r0r_E Subtilisin carlsberg; h 100.0 2.8E-50 9.6E-55 384.2 21.6 241 20-457 7-252 (274)
6 1dbi_A AK.1 serine protease; h 100.0 5.8E-50 2E-54 383.0 23.8 241 21-457 15-256 (280)
7 4h6x_A Thiazoline oxidase/subt 100.0 2.9E-52 1E-56 412.6 7.4 277 24-457 18-310 (357)
8 1gci_A Subtilisin; hydrolase, 100.0 7.5E-50 2.6E-54 379.8 22.9 238 22-457 9-247 (269)
9 1to2_E Subtilisin BPN'; serine 100.0 7.6E-50 2.6E-54 382.4 22.2 241 21-457 8-253 (281)
10 3t41_A Epidermin leader peptid 100.0 6E-50 2.1E-54 411.5 21.9 279 1-457 94-440 (471)
11 1thm_A Thermitase; hydrolase(s 100.0 2.9E-49 1E-53 378.2 23.2 240 21-457 15-255 (279)
12 1sh7_A Extracellular subtilisi 100.0 4.2E-49 1.4E-53 377.4 23.8 232 25-457 17-252 (284)
13 2ixt_A 36KDA protease; serine 100.0 4.5E-49 1.5E-53 383.3 22.7 260 21-457 10-282 (310)
14 2x8j_A Intracellular subtilisi 100.0 2.9E-49 9.9E-54 386.3 20.0 246 21-457 25-287 (327)
15 2b6n_A Proteinase K; S binding 100.0 8E-49 2.7E-53 374.9 22.3 233 25-457 19-256 (278)
16 2z2z_A TK-subtilisin precursor 100.0 1.6E-49 5.4E-54 398.5 18.1 264 1-457 51-366 (395)
17 4dzt_A Aqualysin-1, aqualysin- 100.0 1.2E-48 4.2E-53 373.8 21.8 232 24-457 18-254 (276)
18 1r6v_A Subtilisin-like serine 100.0 1.7E-48 5.7E-53 408.6 20.6 270 1-457 86-413 (671)
19 1wmd_A Protease; alpha-beta hy 100.0 1.5E-48 5E-53 396.6 18.6 261 19-457 3-292 (434)
20 3zxy_A Subtilisin-like protein 100.0 1E-48 3.5E-53 375.6 15.5 238 34-457 3-247 (282)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 3E-48 1E-52 383.3 17.6 251 21-457 27-304 (347)
22 3lpc_A APRB2; protease, subtil 100.0 8E-48 2.7E-52 379.4 19.3 268 24-457 19-312 (340)
23 4h6w_A N-terminal cyanobactin 100.0 3.7E-48 1.3E-52 376.4 14.7 249 22-457 6-260 (306)
24 2z30_A TK-subtilisin; thermoco 100.0 9.3E-48 3.2E-52 375.1 16.7 244 21-457 12-291 (320)
25 2pwa_A Proteinase K; structure 100.0 1.3E-47 4.3E-52 366.2 17.1 220 34-457 27-255 (279)
26 3f7m_A Alkaline serine proteas 100.0 5.5E-47 1.9E-51 362.9 17.8 224 29-457 24-256 (279)
27 1y9z_A Alkaline serine proteas 100.0 1.9E-46 6.5E-51 381.4 20.4 172 21-237 8-183 (441)
28 2p4e_P Proprotein convertase s 100.0 1.5E-48 5E-53 406.5 0.8 268 1-457 137-418 (692)
29 2qtw_B Proprotein convertase s 100.0 6.5E-46 2.2E-50 377.1 19.2 241 29-457 17-266 (546)
30 1p8j_A Furin precursor; prohor 100.0 3.3E-45 1.1E-49 375.1 18.1 257 23-457 24-293 (471)
31 2id4_A Kexin; KEX2, kexin, fur 100.0 4.4E-44 1.5E-48 369.2 19.6 249 23-457 40-304 (503)
32 2oxa_A Extracellular serine pr 100.0 7E-44 2.4E-48 375.7 19.7 156 24-217 57-222 (600)
33 3hjr_A Extracellular serine pr 100.0 3.6E-41 1.2E-45 356.2 20.6 156 24-216 57-221 (600)
34 3lxu_X Tripeptidyl-peptidase 2 100.0 2.9E-40 9.8E-45 360.7 22.5 267 39-457 214-498 (1354)
35 1t1e_A Kumamolisin; proenzyme, 99.9 8.8E-25 3E-29 225.9 6.7 97 137-237 275-384 (552)
36 1ga6_A Serine-carboxyl protein 99.8 1.7E-21 5.9E-26 192.0 10.1 101 137-237 90-207 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.1 3.2E-10 1.1E-14 116.4 11.6 67 171-237 297-375 (544)
38 3icu_A E3 ubiquitin-protein li 96.7 0.0051 1.7E-07 53.9 8.2 83 286-368 82-184 (194)
39 3lxu_X Tripeptidyl-peptidase 2 92.0 0.13 4.4E-06 57.6 5.1 58 22-97 19-78 (1354)
40 1wgl_A TOLL-interacting protei 73.8 1.6 5.3E-05 30.0 1.9 30 427-456 5-34 (59)
41 3iib_A Peptidase M28; YP_92679 71.2 7.7 0.00027 38.4 7.1 71 297-367 124-223 (444)
42 1y9z_A Alkaline serine proteas 70.6 1.6 5.5E-05 43.3 1.9 251 142-457 122-401 (441)
43 2ek8_A Aminopeptidase; metallo 65.6 7.3 0.00025 38.2 5.5 62 297-358 110-182 (421)
44 1ni7_A ER75, hypothetical prot 57.7 7.7 0.00026 32.3 3.4 31 422-453 80-110 (155)
45 1otr_A Protein CUE2; protein-p 55.4 10 0.00035 24.8 3.0 23 434-456 7-29 (49)
46 3g0m_A Cysteine desulfuration 51.9 7.5 0.00026 31.8 2.4 31 422-453 73-103 (141)
47 2dhy_A CUE domain-containing p 37.1 27 0.00093 24.4 3.0 23 434-456 21-43 (67)
48 3kas_A Transferrin receptor pr 36.0 33 0.0011 35.6 4.8 61 298-358 128-230 (640)
49 1wlo_A SUFE protein; structura 35.3 7.9 0.00027 31.5 -0.0 25 428-452 72-96 (136)
50 4g3o_A E3 ubiquitin-protein li 24.7 85 0.0029 21.2 3.6 31 427-457 13-43 (58)
51 3fed_A Glutamate carboxypeptid 23.1 17 0.00057 38.3 -0.1 33 297-329 150-187 (707)
52 2l5b_A Activator of apoptosis 20.4 53 0.0018 18.5 1.6 16 426-441 13-28 (32)
53 2ga1_A Protein of unknown func 20.2 61 0.0021 24.9 2.6 34 422-455 48-87 (106)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=1.7e-75 Score=615.39 Aligned_cols=428 Identities=38% Similarity=0.643 Sum_probs=383.0
Q ss_pred ccCcccccCCch--hcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccc---cccceeEEEecc
Q 044513 17 TTRSWDFMGFSQ--QVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFT---CNNKIVGARYYK 91 (457)
Q Consensus 17 ~~~s~~~~~~~~--~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~ 91 (457)
.+++|+|+|++. .+|..+++|+||+|||||||||++||+|.+.++++++..|++.|+.+.+|. ||+|+++.++|.
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~ 80 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN 80 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence 368999999984 599999999999999999999999999999999999999999999998886 999999999997
Q ss_pred CCCC----CCCCCCCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCCCCHHHHHHHHHH
Q 044513 92 SDGE----FGPDDLPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDGCDDADILAAFDD 167 (457)
Q Consensus 92 ~~~~----~~~~~~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~i~~ai~~ 167 (457)
++.. ....+...++|..||||||||||||+..++.+.+|++.+.+.|+||+|+|+++|+++..++..+++++||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~Ai~~ 160 (649)
T 3i6s_A 81 KGILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIAAMDQ 160 (649)
T ss_dssp HHHHHHCTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHHHHHHH
T ss_pred CcccccccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHHHHHHH
Confidence 4321 122334567889999999999999999998899999889899999999999999999877899999999999
Q ss_pred HHHCCCcEEEecCCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCCCccCCCCCCceEEEeeecCceeeeeEEeC
Q 044513 168 AIADGVDIISLSLGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSRSTITNVAPWFISVAASTIDRKFSTKVQLG 247 (457)
Q Consensus 168 a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~~~~~~~i~Vga~~~~~~~~~~~~~~ 247 (457)
|+++|++|||||||.. ...+..+.+..++++|.++|+++|+||||+|....+.++.++|+|+||+++.++.|...+.++
T Consensus 161 A~~~gvdVIn~SlG~~-~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~lg 239 (649)
T 3i6s_A 161 AVADGVDMISISYGYR-FIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTLG 239 (649)
T ss_dssp HHHTTCSEEEECCCCC-SCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEET
T ss_pred HHHcCCCEEEeCCccC-CcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEeC
Confidence 9999999999999987 456677899999999999999999999999999888999999999999999999999999999
Q ss_pred CCceeeceecccccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCccccccc--CCcEEEEecCC-----CccccccCC
Q 044513 248 NNNIYEGISINTYDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLV--KGKIVVCDDLV-----SGEGPFSAG 320 (457)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~i~~~~~~~-----~~~~~~~~g 320 (457)
+++.+.+.++.........+++++.. ....|....++...+ +|||++|.++. +..++...|
T Consensus 240 ng~~~~g~sl~~~~~~~~~~plv~~~------------~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~G 307 (649)
T 3i6s_A 240 NGLKIRGWSLFPARAFVRDSPVIYNK------------TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARL 307 (649)
T ss_dssp TSCEEEEECCCSSCBCEEEEEEECCT------------TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTC
T ss_pred CCcEEeeeecccCcccCcceeeEecc------------cccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcC
Confidence 99999999988776667788998854 245799888887777 99999999864 556778999
Q ss_pred ceEEEEecCCCCCCCCCCCcceEeeccccHHHHHHHHHhCCCcEEEE-eeeccccCCCCCccccccCCCCCCCCCCCCCC
Q 044513 321 AVGALMQGQRRRDRAFSFPLPTSYVDTNDGSDILLYINSTRNATATI-YRSTEGNNTLAPIVGSLSSRGPNPITPDILKP 399 (457)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KP 399 (457)
+.+++++++..........+|...+...++..+++++.+..++++++ ...+..+....+.++.||||||+....+++||
T Consensus 308 a~g~i~~n~~~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKP 387 (649)
T 3i6s_A 308 KAAIFISEDPGVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKP 387 (649)
T ss_dssp SEEEEECCCGGGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSC
T ss_pred ceEEEEecCccccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCC
Confidence 99999999886666677889999999999999999999999999999 44455566778899999999999966799999
Q ss_pred ceeecCccEEeeecCC-------------CCCccCCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 400 DISAPGIDILAAWSPV-------------NPVSEVKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 400 di~APG~~i~s~~~~~-------------~~~~~~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
||+|||.+|+++++.. ..|..++|||||||||||++|||+|++|+|+|++||++|++|
T Consensus 388 DI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtT 458 (649)
T 3i6s_A 388 DILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTT 458 (649)
T ss_dssp CEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHT
T ss_pred eEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcc
Confidence 9999999999998763 467778999999999999999999999999999999999987
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=5.8e-75 Score=612.91 Aligned_cols=436 Identities=59% Similarity=0.995 Sum_probs=386.1
Q ss_pred ccCcccccCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCC
Q 044513 17 TTRSWDFMGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEF 96 (457)
Q Consensus 17 ~~~s~~~~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 96 (457)
.+|+|+|+|++...|.+..+|+||+|||||||||++||+|.++++++++..|++.|+.+.++.||+|+++.++|......
T Consensus 1 tt~s~~flGl~~~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~~n~k~ig~~~~~~~~~~ 80 (621)
T 3vta_A 1 TTRSWDFLGFPLTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFRCNRKIIGARSYHIGRPI 80 (621)
T ss_dssp CCSHHHHTTCCTTCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCCCCSSEEEEEECCCSSSC
T ss_pred CCCChhHcCCCccccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcccCcceeeeeecccCCcc
Confidence 36899999999889999999999999999999999999999999999999999999999999999999999999887766
Q ss_pred CCCCCCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCCCCHHHHHHHHHHHHHCCCcEE
Q 044513 97 GPDDLPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDGCDDADILAAFDDAIADGVDII 176 (457)
Q Consensus 97 ~~~~~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~i~~ai~~a~~~~~~Vi 176 (457)
.+.+...++|+.||||||||||||+..++.+.+|.+.+.++|+||+|+|+++|++.+.++..+++++||++|+++|++||
T Consensus 81 ~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~~a~~~a~~~g~dVi 160 (621)
T 3vta_A 81 SPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGVDII 160 (621)
T ss_dssp CTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHHHHHHHHHHHTCSEE
T ss_pred CCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 66666788899999999999999999888888888888899999999999999999988899999999999999999999
Q ss_pred EecCCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCCCccCCCCCCceEEEeeecCceeeeeEEeCCCceeecee
Q 044513 177 SLSLGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSRSTITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEGIS 256 (457)
Q Consensus 177 n~S~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~~ 256 (457)
|||||......+..++++.+++++.++|+++|+||||+|....+.++.++|.++|++.+.++.+.....++++..+.+.+
T Consensus 161 n~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~~~~~~~~~~~s 240 (621)
T 3vta_A 161 SLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVS 240 (621)
T ss_dssp EECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEEETTSCEEEEBC
T ss_pred EecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEEeccCceeeeee
Confidence 99999987777788999999999999999999999999999999999999999999999999999999999999888877
Q ss_pred cccccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCC--ccccccCCceEEEEecCCCCCC
Q 044513 257 INTYDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVS--GEGPFSAGAVGALMQGQRRRDR 334 (457)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~ 334 (457)
+..+ ....++++......... ........|....++...+++||++|.+... .......|+.+++++++... .
T Consensus 241 ~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~gkivl~~~~~~~~~~~~~~~Ga~gvi~~~~~~~-~ 315 (621)
T 3vta_A 241 INTF--DNQYYPLVSGRDIPNTG--FDKSTSRFCTDKSVNPNLLKGKIVVCEASFGPHEFFKSLDGAAGVLMTSNTRD-Y 315 (621)
T ss_dssp CCCS--CCEEECEEETTTSCCTT--CCHHHHTTTCTTCSCGGGTTTSEEECSSCCCHHHHHHHHTTCSEEEEECSCCS-S
T ss_pred cccC--CCccccccccccccccc--ccccccccccccccccccccceEEEEecCCChhHHhhhhcceeEEEEEecCCC-c
Confidence 6543 34567777665544322 1223456788888999999999999987643 33456789999998876543 4
Q ss_pred CCCCCcceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecC
Q 044513 335 AFSFPLPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSP 414 (457)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~ 414 (457)
...+++|...+...++..+..++.....+..++.......+...+.++.||||||+...++++||||+|||.+|+++++.
T Consensus 316 ~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~ 395 (621)
T 3vta_A 316 ADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPS 395 (621)
T ss_dssp CCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEEECTTCCCBCTTSCCCSCTTCTTSCSCCEEEECSSEEEECCS
T ss_pred ccccccceEEECHHHHHHHHHHHhccCCcceEEecceEeccCCCCceeeecCCCCCCCCCCeeccccccCCcceEeecCc
Confidence 56788999999999999999999999988888877777667778899999999999877899999999999999999863
Q ss_pred ---------CCCCccCCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 415 ---------VNPVSEVKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 415 ---------~~~~~~~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
...|..++|||||||||||++|||+|++|+|+|++||++|++|
T Consensus 396 ~~~~~~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtT 447 (621)
T 3vta_A 396 VAPVGGIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTT 447 (621)
T ss_dssp SSCBTTBCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHT
T ss_pred cccccCcCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhc
Confidence 2457778999999999999999999999999999999999987
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=1.4e-60 Score=522.88 Aligned_cols=394 Identities=23% Similarity=0.299 Sum_probs=305.2
Q ss_pred cccCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccC-------------CccccccceeEEE
Q 044513 22 DFMGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVS-------------ANFTCNNKIVGAR 88 (457)
Q Consensus 22 ~~~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i~~~~ 88 (457)
++++++ .+|.++++|+||+|||||||||++||+|... ..|+..|... ....||+|+++++
T Consensus 2 d~i~~~-~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~ 74 (926)
T 1xf1_A 2 DPSQVK-TLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYH 74 (926)
T ss_dssp CTTCCH-HHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEE
T ss_pred CccccH-HHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceee
Confidence 467888 7999999999999999999999999999853 2343333221 1225899999999
Q ss_pred eccCCCCCCCCCCCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC--CCHHHHHHHHH
Q 044513 89 YYKSDGEFGPDDLPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG--CDDADILAAFD 166 (457)
Q Consensus 89 ~~~~~~~~~~~~~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~--~~~~~i~~ai~ 166 (457)
+|..+. ...|..||||||||||||+...+.+. .+.+.||||+|+|+++|++.+.+ +..+++++||+
T Consensus 75 ~~~~~~--------~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~ 142 (926)
T 1xf1_A 75 DYSKDG--------KTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIR 142 (926)
T ss_dssp ESCCCS--------CCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHH
T ss_pred ccccCC--------CCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHH
Confidence 997652 22378999999999999987443221 23459999999999999998765 34578999999
Q ss_pred HHHHCCCcEEEecCCCCCC-CCCccchHHHHHHHhhhCCcEEEEecCCCCCCC---------------CccCCCCCCceE
Q 044513 167 DAIADGVDIISLSLGSSNP-HEYFNDSIAIGTFHAMRNGILTSASAGNDGPSR---------------STITNVAPWFIS 230 (457)
Q Consensus 167 ~a~~~~~~Vin~S~G~~~~-~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~---------------~~~~~~~~~~i~ 230 (457)
+|+++|++|||||||.... .....+.+..++++|.++|++||+||||+|... ...++.++|+|+
T Consensus 143 ~Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vit 222 (926)
T 1xf1_A 143 DAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLT 222 (926)
T ss_dssp HHHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEE
T ss_pred HHHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEE
Confidence 9999999999999998643 344567888899999999999999999999632 234456899999
Q ss_pred EEeeecCceeeeeEEe-CCCceeeceeccc--ccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEE
Q 044513 231 VAASTIDRKFSTKVQL-GNNNIYEGISINT--YDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVC 307 (457)
Q Consensus 231 Vga~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ 307 (457)
||+++.++.+...+.+ +++....+.++.. ....+..+++++... .|....+ .+++|||+||
T Consensus 223 VgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~--------------g~~~~~~--~~v~Gkivl~ 286 (926)
T 1xf1_A 223 VASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR--------------GTKEDDF--KDVKGKIALI 286 (926)
T ss_dssp EEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT--------------SCSTTTT--TTCTTSEEEE
T ss_pred EeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC--------------CCCccch--hhcCCeEEEE
Confidence 9999999888877776 4443333333321 112356788887543 3654444 6899999999
Q ss_pred ecCC-----CccccccCCceEEEEecCCCCC----CCCCCCcceEeeccccHHHHHHHHHhCCCcEEEEeee-ccccCCC
Q 044513 308 DDLV-----SGEGPFSAGAVGALMQGQRRRD----RAFSFPLPTSYVDTNDGSDILLYINSTRNATATIYRS-TEGNNTL 377 (457)
Q Consensus 308 ~~~~-----~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 377 (457)
.++. +..++...|+++++++++.... .....++|+..++..++..+.+ ....++++... ..+....
T Consensus 287 ~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~~~~~~~~~~ 362 (926)
T 1xf1_A 287 ERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNATPKVLPTAS 362 (926)
T ss_dssp ECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECSSCEEEECSS
T ss_pred ECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEecccceecccCC
Confidence 9864 5567789999999999876432 2456789999999999987763 44445544211 1233455
Q ss_pred CCccccccCCCCCCCCCCCCCCceeecCccEEeeecCCCCCccCCcchhhHHHHHHHHHHHHH----hCCCCCHHH----
Q 044513 378 APIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSPVNPVSEVKGTSMACPHVTGAAAYIKS----FHPTWSPAA---- 449 (457)
Q Consensus 378 ~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~~sGTSmAaP~VAG~aALl~~----~~P~lt~~~---- 449 (457)
.+.++.||||||+. ++++||||+|||.+|+++++. +.|..++|||||||||||++|||+| .+|+|+++|
T Consensus 363 ~~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~-~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~ 439 (926)
T 1xf1_A 363 GTKLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVAN-NKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDL 439 (926)
T ss_dssp CSBCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSC-SSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHH
T ss_pred cceeccccCCCCCC--CCccCceEECCCCCEEeeccC-CcceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHH
Confidence 67899999999998 999999999999999999986 4788889999999999999999965 599999998
Q ss_pred HHHHHhcC
Q 044513 450 IKSALMTT 457 (457)
Q Consensus 450 i~~~L~~T 457 (457)
||++|++|
T Consensus 440 Iks~L~~T 447 (926)
T 1xf1_A 440 AKKVLMSS 447 (926)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999975
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.5e-53 Score=441.45 Aligned_cols=274 Identities=32% Similarity=0.494 Sum_probs=227.8
Q ss_pred CCCeEEEecCCccccccc-----CcccccCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccC
Q 044513 1 MGGVVSVFPNRKRKLHTT-----RSWDFMGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVS 75 (457)
Q Consensus 1 ~~~V~~v~~~~~~~~~~~-----~s~~~~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~ 75 (457)
+|+|++|++++.+++... +....++++ .+|..+++|+||+|||||||||++||+|.+
T Consensus 98 ~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~G~gv~VaViDtGid~~Hpdl~~----------------- 159 (539)
T 3afg_A 98 LSGVQFIQEDYVVKVAVETEGLDESAAQVMAT-NMWNLGYDGSGITIGIIDTGIDASHPDLQG----------------- 159 (539)
T ss_dssp CTTEEEEEECCEEECC-----------CCBCS-CCBCCSCCCTTCEEEEEESBCCTTSGGGTT-----------------
T ss_pred CCCeeEEEecccccccCccccCCccccccCcH-hHHhcCCCCCCcEEEEEecCCCCCChHHhC-----------------
Confidence 489999999999887543 234456666 789999999999999999999999999954
Q ss_pred CccccccceeEEEeccCCCCCCCCCCCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC
Q 044513 76 ANFTCNNKIVGARYYKSDGEFGPDDLPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG 155 (457)
Q Consensus 76 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~ 155 (457)
++...++|.++. ..+.|..+|||||||||+|++.+. .+.+.||||+|+|+.+|++++.+
T Consensus 160 -------~i~~~~d~~~~~-------~~~~D~~gHGThVAgiiag~~~~~-------~g~~~GvAp~A~l~~~kv~~~~g 218 (539)
T 3afg_A 160 -------KVIGWVDFVNGK-------TTPYDDNGHGTHVASIAAGTGAAS-------NGKYKGMAPGAKLVGIKVLNGQG 218 (539)
T ss_dssp -------TEEEEEETTTCC-------SSCCBSSSHHHHHHHHHHCCCGGG-------TTTTCCSCTTCEEEEEECSCTTS
T ss_pred -------CEeeeEECCCCC-------CCCCCCCCCHHHHHHHHhCcCccC-------CCCEEEECCCCEEEEEEeecCCC
Confidence 556667776542 245678999999999999986442 23358999999999999998765
Q ss_pred -CCHHHHHHHHHHHHHC----CCcEEEecCCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCC--CccCCCCCCc
Q 044513 156 -CDDADILAAFDDAIAD----GVDIISLSLGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSR--STITNVAPWF 228 (457)
Q Consensus 156 -~~~~~i~~ai~~a~~~----~~~Vin~S~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~--~~~~~~~~~~ 228 (457)
+..++++++|+||++. +++|||||||.... ....+.+..++++++++|++||+||||+|... ..+++..+++
T Consensus 219 ~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~-~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~v 297 (539)
T 3afg_A 219 SGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQS-SDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKV 297 (539)
T ss_dssp EEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSC-CCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSS
T ss_pred CcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCCC-CccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCce
Confidence 4778999999999875 89999999998733 34567899999999999999999999999753 3567888999
Q ss_pred eEEEeeecCceeeeeEEeCCCceeeceecccccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEe
Q 044513 229 ISVAASTIDRKFSTKVQLGNNNIYEGISINTYDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCD 308 (457)
Q Consensus 229 i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~ 308 (457)
|+||+.+.+
T Consensus 298 itVgA~~~~----------------------------------------------------------------------- 306 (539)
T 3afg_A 298 ITVGAVDKY----------------------------------------------------------------------- 306 (539)
T ss_dssp EEEEEECTT-----------------------------------------------------------------------
T ss_pred EEEeeecCC-----------------------------------------------------------------------
Confidence 999985432
Q ss_pred cCCCccccccCCceEEEEecCCCCCCCCCCCcceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCC
Q 044513 309 DLVSGEGPFSAGAVGALMQGQRRRDRAFSFPLPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRG 388 (457)
Q Consensus 309 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~G 388 (457)
+.++.||++|
T Consensus 307 ----------------------------------------------------------------------~~~a~fSs~G 316 (539)
T 3afg_A 307 ----------------------------------------------------------------------DVITDFSSRG 316 (539)
T ss_dssp ----------------------------------------------------------------------SCBCSSSCCC
T ss_pred ----------------------------------------------------------------------cccccccCCC
Confidence 2468999999
Q ss_pred CCCCCCCCCCCceeecCccEEeeecCC--------CCCccCCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 389 PNPITPDILKPDISAPGIDILAAWSPV--------NPVSEVKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 389 p~~~~~~~~KPdi~APG~~i~s~~~~~--------~~~~~~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
|+. ++++||||+|||.+|++++... ..|..++|||||||||||++|||+|++|+|++++||++|++|
T Consensus 317 p~~--~~~~kpdi~APG~~I~s~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~t 391 (539)
T 3afg_A 317 PTA--DNRLKPEVVAPGNWIIAARASGTSMGQPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIET 391 (539)
T ss_dssp CCT--TCBCCCSEEEECSSEEEECCTTCCCSEECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred CCC--CCCCcccEecCcCCEEeeccCCCCCCCCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhh
Confidence 998 9999999999999999998532 147778999999999999999999999999999999999875
No 5
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=2.8e-50 Score=384.21 Aligned_cols=241 Identities=29% Similarity=0.440 Sum_probs=202.3
Q ss_pred cccccCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCC
Q 044513 20 SWDFMGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPD 99 (457)
Q Consensus 20 s~~~~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 99 (457)
..+.++++ .+|..+++|+||+|+|||+|||++||+|+ +..+.+|..+.
T Consensus 7 ~l~~i~~~-~~~~~g~~G~gv~VaViDtGid~~h~~l~--------------------------~~~g~~~~~~~----- 54 (274)
T 1r0r_E 7 GIPLIKAD-KVQAQGFKGANVKVAVLDTGIQASHPDLN--------------------------VVGGASFVAGE----- 54 (274)
T ss_dssp HHHHTTHH-HHHHHTCSCTTCEEEEEESCCCTTCTTCC--------------------------EEEEEECSTTC-----
T ss_pred chhhcCCH-HHHhcCCCCCCCEEEEEcCCCCCCCHhHc--------------------------CCCCccccCCC-----
Confidence 33456766 89999999999999999999999999992 23445555432
Q ss_pred CCCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC-CCHHHHHHHHHHHHHCCCcEEEe
Q 044513 100 DLPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG-CDDADILAAFDDAIADGVDIISL 178 (457)
Q Consensus 100 ~~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~~i~~ai~~a~~~~~~Vin~ 178 (457)
....|..+|||||||||++.. ++ .| +.||||+|+|+.+|+++..+ ...++++++|+|+++.+++||||
T Consensus 55 --~~~~d~~gHGT~vAgiia~~~-~~---~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~Vin~ 123 (274)
T 1r0r_E 55 --AYNTDGNGHGTHVAGTVAALD-NT---TG-----VLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDVINM 123 (274)
T ss_dssp --CTTCCSSSHHHHHHHHHHCCS-SS---SB-----CCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEE
T ss_pred --CCCCCCCCCHHHHHHHHHccC-CC---Cc-----eEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCCEEEe
Confidence 234578999999999999973 21 22 28999999999999988765 47788999999999999999999
Q ss_pred cCCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCC----CCccCCCCCCceEEEeeecCceeeeeEEeCCCceeec
Q 044513 179 SLGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPS----RSTITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEG 254 (457)
Q Consensus 179 S~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~----~~~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~ 254 (457)
|||.... ...+.++++++.++|+++|+||||+|.. ...+|+..+++|+||+.+.+
T Consensus 124 S~G~~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~----------------- 182 (274)
T 1r0r_E 124 SLGGASG----STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSN----------------- 182 (274)
T ss_dssp CEEBSSC----CHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTT-----------------
T ss_pred CCCCCCC----cHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecCC-----------------
Confidence 9998732 4678888889999999999999999975 35667888999999986433
Q ss_pred eecccccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCC
Q 044513 255 ISINTYDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDR 334 (457)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 334 (457)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T 1r0r_E 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecC
Q 044513 335 AFSFPLPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSP 414 (457)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~ 414 (457)
+.++.||++||.. ||+|||.+|+++++.
T Consensus 183 --------------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~ 210 (274)
T 1r0r_E 183 --------------------------------------------SNRASFSSVGAEL--------EVMAPGAGVYSTYPT 210 (274)
T ss_dssp --------------------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEETT
T ss_pred --------------------------------------------CCcCccCCCCCCc--------eEEeCCCCeEeecCC
Confidence 2468899999865 999999999999876
Q ss_pred CCCCccCCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 415 VNPVSEVKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 415 ~~~~~~~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
+.|..++|||||||+|||++|||+|++|+|+++|||++|++|
T Consensus 211 -~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~t 252 (274)
T 1r0r_E 211 -NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSST 252 (274)
T ss_dssp -TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHT
T ss_pred -CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHh
Confidence 457778999999999999999999999999999999999876
No 6
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=5.8e-50 Score=383.01 Aligned_cols=241 Identities=29% Similarity=0.349 Sum_probs=197.9
Q ss_pred ccccCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCC
Q 044513 21 WDFMGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDD 100 (457)
Q Consensus 21 ~~~~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 100 (457)
.+.++++ .+|..+..|+||+|+|||+|||++||+|.+ ++..+++|.++.
T Consensus 15 l~~i~~~-~aw~~~~g~~gv~VaViDtGvd~~hp~l~~------------------------~~~~~~~~~~~~------ 63 (280)
T 1dbi_A 15 PQNTYTD-YAWDVTKGSSGQEIAVIDTGVDYTHPDLDG------------------------KVIKGYDFVDND------ 63 (280)
T ss_dssp TGGGTHH-HHTTTCCCCTTCEEEEEESCCCTTSTTTTT------------------------TEEEEEETTTTB------
T ss_pred hhhcCcH-HHHhhcCCCCCCEEEEEeCCcCCCChhhcc------------------------CcccceeccCCC------
Confidence 3456666 899999989999999999999999999964 455666776542
Q ss_pred CCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC-CCHHHHHHHHHHHHHCCCcEEEec
Q 044513 101 LPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG-CDDADILAAFDDAIADGVDIISLS 179 (457)
Q Consensus 101 ~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~~i~~ai~~a~~~~~~Vin~S 179 (457)
..+.|..+|||||||||+|...+.. |+ .||||+|+|+.+|+++..+ ...++++++|+|+++.+++|||||
T Consensus 64 -~~~~d~~gHGT~vAgiia~~~~~~~---g~-----~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~~Vin~S 134 (280)
T 1dbi_A 64 -YDPMDLNNHGTHVAGIAAAETNNAT---GI-----AGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGAEVINLS 134 (280)
T ss_dssp -SCCCCSSSHHHHHHHHHHCCCSSSS---SC-----CCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred -CCCCCCCCcHHHHHHHHhCcCCCCC---cc-----eEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCCCEEEeC
Confidence 2456789999999999999865532 22 8999999999999998765 578899999999999999999999
Q ss_pred CCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCCCccCCCCCCceEEEeeecCceeeeeEEeCCCceeeceeccc
Q 044513 180 LGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSRSTITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEGISINT 259 (457)
Q Consensus 180 ~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (457)
||... ....+..+++++.++|++||+||||+|.....+|+..+++|+||+.+.+
T Consensus 135 ~G~~~----~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~---------------------- 188 (280)
T 1dbi_A 135 LGCDC----HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY---------------------- 188 (280)
T ss_dssp CSSCC----CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT----------------------
T ss_pred CCCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC----------------------
Confidence 99863 2467888888999999999999999998877889999999999986433
Q ss_pred ccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCCCCCCC
Q 044513 260 YDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDRAFSFP 339 (457)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 339 (457)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecCCCCCc
Q 044513 340 LPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSPVNPVS 419 (457)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~ 419 (457)
+.+++||++||.. ||+|||.+|.++.+. +.|.
T Consensus 189 ---------------------------------------~~~~~~S~~G~~~--------dv~ApG~~i~s~~~~-~~~~ 220 (280)
T 1dbi_A 189 ---------------------------------------DRLASFSNYGTWV--------DVVAPGVDIVSTITG-NRYA 220 (280)
T ss_dssp ---------------------------------------SCBCTTBCCSTTC--------CEEEECSSEEEEETT-TEEE
T ss_pred ---------------------------------------CCcCCCCCCCCCc--------eEEEecCCeEeecCC-CCEE
Confidence 2468899999875 999999999999876 4577
Q ss_pred cCCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 420 EVKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 420 ~~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
.++|||||||+|||++|||++ |++++.|||++|++|
T Consensus 221 ~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~t 256 (280)
T 1dbi_A 221 YMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQT 256 (280)
T ss_dssp EECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHT
T ss_pred EccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHh
Confidence 789999999999999999987 999999999999976
No 7
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=2.9e-52 Score=412.59 Aligned_cols=277 Identities=22% Similarity=0.225 Sum_probs=191.8
Q ss_pred cCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccc--ccccee----EEEeccCCCCCC
Q 044513 24 MGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFT--CNNKIV----GARYYKSDGEFG 97 (457)
Q Consensus 24 ~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~----~~~~~~~~~~~~ 97 (457)
.|++ .+|.+++.|++|+|||||||||++||+|.+....+....|++..+...... .+..+. .+..+.......
T Consensus 18 pG~~-~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (357)
T 4h6x_A 18 PGLA-DLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALEAV 96 (357)
T ss_dssp TTHH-HHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHHHH
T ss_pred cCHH-HHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCccccccccccccccc
Confidence 3666 899999999999999999999999999998777777888887766543321 000000 000000000000
Q ss_pred CCCCCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC------CCHHHHHHHHHHHHHC
Q 044513 98 PDDLPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG------CDDADILAAFDDAIAD 171 (457)
Q Consensus 98 ~~~~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~------~~~~~i~~ai~~a~~~ 171 (457)
..+...+.|..||||||||||+|+.++ | +.||||+|+|+.+|++.... ....+++++|+|+++.
T Consensus 97 ~~~~~~~~D~~gHGThVAGiiag~~~~-----g-----~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~ 166 (357)
T 4h6x_A 97 IPDTKDRIVLNDHACHVTSTIVGQEHS-----P-----VFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALEL 166 (357)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCTTS-----S-----CCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHT
T ss_pred cCCCCCCcCCCCcHHHHHHHHhccCCC-----C-----ceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHc
Confidence 000112345678999999999998532 2 38999999999999965422 2445788999999999
Q ss_pred CCcEEEecCCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCCCccCCCCCCceEEEeeecCceeeeeEEeCCCce
Q 044513 172 GVDIISLSLGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSRSTITNVAPWFISVAASTIDRKFSTKVQLGNNNI 251 (457)
Q Consensus 172 ~~~Vin~S~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~ 251 (457)
+++|||||||.........+.+.++++++.++|+++|+||||+|.....+|+..+++|+||+++.+
T Consensus 167 g~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------- 232 (357)
T 4h6x_A 167 GANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKVD-------------- 232 (357)
T ss_dssp TCSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECTT--------------
T ss_pred CCCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEeccC--------------
Confidence 999999999987555666788999999999999999999999999888899999999999986543
Q ss_pred eeceecccccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCC
Q 044513 252 YEGISINTYDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRR 331 (457)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~ 331 (457)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCcceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEee
Q 044513 332 RDRAFSFPLPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAA 411 (457)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~ 411 (457)
+.++.||++|+.. .||||+|||.+|+++
T Consensus 233 -----------------------------------------------~~~~~fSn~G~~~-----~~~di~APG~~i~s~ 260 (357)
T 4h6x_A 233 -----------------------------------------------GTPCHFSNWGGNN-----TKEGILAPGEEILGA 260 (357)
T ss_dssp -----------------------------------------------SSBCTTCC---CT-----TTTEEEEECSSEEEC
T ss_pred -----------------------------------------------CcccccccCCCCC-----CccceeecCCCeEec
Confidence 3568999999764 589999999999999
Q ss_pred ecCCCCCccCCcchhhHHHHHHHHHHHHH----hCCCCCHHHHHHHHhcC
Q 044513 412 WSPVNPVSEVKGTSMACPHVTGAAAYIKS----FHPTWSPAAIKSALMTT 457 (457)
Q Consensus 412 ~~~~~~~~~~sGTSmAaP~VAG~aALl~~----~~P~lt~~~i~~~L~~T 457 (457)
.+.++++..++|||||||+|||++|||++ ++|.|+++|||++|++|
T Consensus 261 ~~~~~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~t 310 (357)
T 4h6x_A 261 QPCTEEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKT 310 (357)
T ss_dssp CTTCSCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC
T ss_pred cCCCCcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhh
Confidence 99888888889999999999999999995 46689999999999986
No 8
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=7.5e-50 Score=379.84 Aligned_cols=238 Identities=30% Similarity=0.460 Sum_probs=202.9
Q ss_pred cccCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCCC
Q 044513 22 DFMGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDL 101 (457)
Q Consensus 22 ~~~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 101 (457)
+.++++ .+|..+++|+||+|+|||+|| .+||+|+ +..+.+|..+.
T Consensus 9 ~~i~~~-~a~~~g~~G~gv~VaViDtGi-~~h~~l~--------------------------~~~~~~~~~~~------- 53 (269)
T 1gci_A 9 SRVQAP-AAHNRGLTGSGVKVAVLDTGI-STHPDLN--------------------------IRGGASFVPGE------- 53 (269)
T ss_dssp HHTTHH-HHHHTTCSCTTCEEEEEESCC-CCCTTCC--------------------------EEEEEECSTTC-------
T ss_pred hhcCcH-HHHhcCCCCCCCEEEEECCCC-CCCHhhc--------------------------ccCCcccCCCC-------
Confidence 456666 899999999999999999999 8999992 23455555432
Q ss_pred CCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC-CCHHHHHHHHHHHHHCCCcEEEecC
Q 044513 102 PSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG-CDDADILAAFDDAIADGVDIISLSL 180 (457)
Q Consensus 102 ~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~~i~~ai~~a~~~~~~Vin~S~ 180 (457)
....|..+|||||||||+|.. +. .|+ .|+||+|+|+.+|+++..+ ...++++++|+|+++.+++||||||
T Consensus 54 ~~~~d~~gHGT~vAgiia~~~-~~---~~~-----~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~Vin~S~ 124 (269)
T 1gci_A 54 PSTQDGNGHGTHVAGTIAALN-NS---IGV-----LGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSL 124 (269)
T ss_dssp CSCSCSSSHHHHHHHHHHCCC-SS---SBC-----CCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCCChHHHHHHHhcCc-CC---CCc-----EEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCCeEEEeCC
Confidence 235678999999999999973 21 223 8999999999999998765 4788999999999999999999999
Q ss_pred CCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCCCccCCCCCCceEEEeeecCceeeeeEEeCCCceeeceecccc
Q 044513 181 GSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSRSTITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEGISINTY 260 (457)
Q Consensus 181 G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (457)
|.... ...+.++++++.++|++||+||||+|.....+|+..+++|+||+.+.+
T Consensus 125 G~~~~----~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~----------------------- 177 (269)
T 1gci_A 125 GSPSP----SATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN----------------------- 177 (269)
T ss_dssp CBSSC----CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT-----------------------
T ss_pred CCCCC----CHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecCC-----------------------
Confidence 98732 357888888999999999999999998888899999999999986433
Q ss_pred cCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCCCCCCCc
Q 044513 261 DLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDRAFSFPL 340 (457)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 340 (457)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T 1gci_A 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecCCCCCcc
Q 044513 341 PTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSPVNPVSE 420 (457)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~ 420 (457)
+.++.||++||.. ||+|||.+|.++.+. +.|..
T Consensus 178 --------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~-~~~~~ 210 (269)
T 1gci_A 178 --------------------------------------NNRASFSQYGAGL--------DIVAPGVNVQSTYPG-STYAS 210 (269)
T ss_dssp --------------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEETT-TEEEE
T ss_pred --------------------------------------CCCCCCCCCCCCc--------ceEecCCCeEeecCC-CCEEE
Confidence 2468899999976 999999999999876 45677
Q ss_pred CCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 421 VKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 421 ~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
++|||||||+|||++|||+|++|+|+++|||++|++|
T Consensus 211 ~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~t 247 (269)
T 1gci_A 211 LNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNT 247 (269)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHT
T ss_pred cCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 8999999999999999999999999999999999876
No 9
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=7.6e-50 Score=382.41 Aligned_cols=241 Identities=30% Similarity=0.441 Sum_probs=201.5
Q ss_pred ccccCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCC
Q 044513 21 WDFMGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDD 100 (457)
Q Consensus 21 ~~~~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 100 (457)
.+.++++ .+|..+++|+||+|+|||+|||++||+|+ +..+.+|..+..
T Consensus 8 l~~i~~~-~~~~~g~~G~gv~VaViDtGid~~h~~l~--------------------------~~~g~~~~~~~~----- 55 (281)
T 1to2_E 8 VSQIKAP-ALHSQGYTGSNVKVAVIDSGIDSSHPDLK--------------------------VAGGASMVPSET----- 55 (281)
T ss_dssp HHHTTHH-HHHHHTCSCTTCEEEEEESCCCTTCTTCC--------------------------EEEEEECCTTCC-----
T ss_pred hhhcChH-HHHhcCCCCCCCEEEEEcCCCCCCCHHHc--------------------------CcCCccccCCCC-----
Confidence 3456666 89999999999999999999999999993 233445543311
Q ss_pred CCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC-CCHHHHHHHHHHHHHCCCcEEEec
Q 044513 101 LPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG-CDDADILAAFDDAIADGVDIISLS 179 (457)
Q Consensus 101 ~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~~i~~ai~~a~~~~~~Vin~S 179 (457)
....|..+|||||||||+|.. ++ .| +.||||+|+|+.+|+++..+ ...++++++|+|+++.+++|||||
T Consensus 56 -~~~~d~~gHGT~vAgiia~~~-~~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S 125 (281)
T 1to2_E 56 -NPFQDNNSHGTHVAGTVAALN-NS---IG-----VLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINMS 125 (281)
T ss_dssp -CTTCCSSSHHHHHHHHHHCCS-SS---SS-----BCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEEC
T ss_pred -CCCCCCCCcHHHHHHHHhccC-CC---Cc-----ceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCCcEEEEC
Confidence 123578999999999999973 21 22 28999999999999988765 477889999999999999999999
Q ss_pred CCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCC----CCccCCCCCCceEEEeeecCceeeeeEEeCCCceeece
Q 044513 180 LGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPS----RSTITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEGI 255 (457)
Q Consensus 180 ~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~----~~~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~ 255 (457)
||.... ...+..+++++.++|++||+||||+|.. ...+|+..+++|+||+.+.+
T Consensus 126 ~G~~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~------------------ 183 (281)
T 1to2_E 126 LGGPSG----SAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSS------------------ 183 (281)
T ss_dssp EEBSCC----CHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTT------------------
T ss_pred CcCCCC----CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecCC------------------
Confidence 998732 4678888889999999999999999975 35678888999999985432
Q ss_pred ecccccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCCC
Q 044513 256 SINTYDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDRA 335 (457)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 335 (457)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T 1to2_E 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecCC
Q 044513 336 FSFPLPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSPV 415 (457)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~~ 415 (457)
+.++.||++||.. ||+|||.+|.++.+.
T Consensus 184 -------------------------------------------~~~~~fS~~G~~~--------di~APG~~i~s~~~~- 211 (281)
T 1to2_E 184 -------------------------------------------NQRASFSSVGPEL--------DVMAPGVSIQSTLPG- 211 (281)
T ss_dssp -------------------------------------------SCBCTTCCCSTTC--------CEEEECSSEEEEETT-
T ss_pred -------------------------------------------CCcCCcCCCCCCc--------eEEecCCCeEeecCC-
Confidence 2468899999975 999999999999876
Q ss_pred CCCccCCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 416 NPVSEVKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 416 ~~~~~~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
+.|..++|||||||+|||++|||+|++|+|+++|||++|++|
T Consensus 212 ~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~t 253 (281)
T 1to2_E 212 NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENT 253 (281)
T ss_dssp TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTT
T ss_pred CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhh
Confidence 456778999999999999999999999999999999999986
No 10
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=6e-50 Score=411.50 Aligned_cols=279 Identities=20% Similarity=0.260 Sum_probs=217.3
Q ss_pred CCCeEEEecCCcccccccC-------------cccccCCc--hhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCC
Q 044513 1 MGGVVSVFPNRKRKLHTTR-------------SWDFMGFS--QQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPP 65 (457)
Q Consensus 1 ~~~V~~v~~~~~~~~~~~~-------------s~~~~~~~--~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~ 65 (457)
+|+|++|++++.++++... +|.+..+. ..+|..+++|+||+|||||||||++||+|.+......
T Consensus 94 ~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~~~~~~- 172 (471)
T 3t41_A 94 KNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDDLPKHANTKIAIIDTGVMKNHDDLKNNFSTDS- 172 (471)
T ss_dssp TTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGGCCSSCCCCEEEEESCCCTTCTTTTTTBCTTC-
T ss_pred CCCCcEEEecceeccccccccccCCCCccccccccHhhccCcHHHHhccCCCCCcEEEEEeCCCCCCChhHhcCcccCC-
Confidence 5899999999888776432 34444443 3589999999999999999999999999976432100
Q ss_pred CccccccccCCccccccceeEEEeccCCCCCCCCCCCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccE
Q 044513 66 TKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDLPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARI 145 (457)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l 145 (457)
.+++....|.........+...+.|..+|||||||||+|++. +.||||+|+|
T Consensus 173 ----------------~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiiaa~g~------------~~GvAp~a~l 224 (471)
T 3t41_A 173 ----------------KNLVPLNGFRGTEPEETGDVHDVNDRKGHGTMVSGQTSANGK------------LIGVAPNNKF 224 (471)
T ss_dssp ----------------EECCCTTCGGGCCTTCCCCTTCCCCSSSHHHHHHHHHHCBSS------------SBCSSTTSCE
T ss_pred ----------------cccccCCCccCCCcccCCCCCCCcCCCCccchhhheeecCCc------------eeEECCCCeE
Confidence 000111111111111112223567789999999999998742 3899999999
Q ss_pred EEeeeecCCCCCHHHHHHHHHHHHHCCCcEEEecCCCCCCCC------------CccchHHHHHHHhhhCCcEEEEecCC
Q 044513 146 AVYKICWSDGCDDADILAAFDDAIADGVDIISLSLGSSNPHE------------YFNDSIAIGTFHAMRNGILTSASAGN 213 (457)
Q Consensus 146 ~~~kv~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~------------~~~~~~~~~~~~a~~~gi~vV~AAGN 213 (457)
+.+|++++.....++++++|+++++.+++|||||||...... ...+.+..+++++.++|++||+||||
T Consensus 225 ~~~kv~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN 304 (471)
T 3t41_A 225 TMYRVFGSKKTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGN 304 (471)
T ss_dssp EEEECCSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred EEEEeccCCCCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 999999887778999999999999999999999999731111 22367788888889999999999999
Q ss_pred CCCCCC------------------ccCCCCCCceEEEeeecCceeeeeEEeCCCceeeceecccccCCCceeeeEecCCC
Q 044513 214 DGPSRS------------------TITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEGISINTYDLQNVTYPLIYGGDA 275 (457)
Q Consensus 214 ~g~~~~------------------~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (457)
+|.... .+|+..+++|+||+++.+
T Consensus 305 ~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~~-------------------------------------- 346 (471)
T 3t41_A 305 DGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQK-------------------------------------- 346 (471)
T ss_dssp SCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECTT--------------------------------------
T ss_pred CCcCCCcccccccccccccCCceeeccccCCCeEEEEeeCCC--------------------------------------
Confidence 997643 367888999999986433
Q ss_pred CCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCCCCCCCcceEeeccccHHHHHH
Q 044513 276 ANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDRAFSFPLPTSYVDTNDGSDILL 355 (457)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (457)
T Consensus 347 -------------------------------------------------------------------------------- 346 (471)
T 3t41_A 347 -------------------------------------------------------------------------------- 346 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCcc----------------------EEeeec
Q 044513 356 YINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGID----------------------ILAAWS 413 (457)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~----------------------i~s~~~ 413 (457)
+.+++||++||+. |||+|||++ |+++.+
T Consensus 347 -----------------------~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~ 396 (471)
T 3t41_A 347 -----------------------SNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTAN 396 (471)
T ss_dssp -----------------------SSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECT
T ss_pred -----------------------CCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCC
Confidence 2568999999974 599999987 888887
Q ss_pred CCCCCccCCcchhhHHHHHHHHHHHHHhCC-CCCHHHHHHHHhcC
Q 044513 414 PVNPVSEVKGTSMACPHVTGAAAYIKSFHP-TWSPAAIKSALMTT 457 (457)
Q Consensus 414 ~~~~~~~~sGTSmAaP~VAG~aALl~~~~P-~lt~~~i~~~L~~T 457 (457)
. +.|..++|||||||+|||++|||+|++| .+++++||++|++|
T Consensus 397 ~-~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~t 440 (471)
T 3t41_A 397 N-GRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQH 440 (471)
T ss_dssp T-SSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred C-CCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHh
Confidence 6 4677789999999999999999999999 89999999999865
No 11
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=2.9e-49 Score=378.17 Aligned_cols=240 Identities=28% Similarity=0.384 Sum_probs=204.1
Q ss_pred ccccCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCC
Q 044513 21 WDFMGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDD 100 (457)
Q Consensus 21 ~~~~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 100 (457)
.+.++++ .+|+.+ +|+||+|+|||+|||++||+|.+ ++..+++|.++.
T Consensus 15 l~~i~~~-~aw~~~-~G~gv~VaViDtGvd~~h~~l~~------------------------~~~~~~~~~~~~------ 62 (279)
T 1thm_A 15 PQKIQAP-QAWDIA-EGSGAKIAIVDTGVQSNHPDLAG------------------------KVVGGWDFVDND------ 62 (279)
T ss_dssp HHHTTHH-HHHTTC-CCTTCEEEEEESCCCTTCTTTTT------------------------TEEEEEETTTTB------
T ss_pred hhhCChH-HHHhcC-CCCCCEEEEEccCCCCCCcchhc------------------------CccccccccCCC------
Confidence 4456666 788886 79999999999999999999965 445566776542
Q ss_pred CCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC-CCHHHHHHHHHHHHHCCCcEEEec
Q 044513 101 LPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG-CDDADILAAFDDAIADGVDIISLS 179 (457)
Q Consensus 101 ~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~~i~~ai~~a~~~~~~Vin~S 179 (457)
..+.|..+|||||||||+|...++. |+ .|+||+|+|+.+|+++..+ ...++++++|+||++.+++|||||
T Consensus 63 -~~~~d~~gHGT~vAgiia~~~~n~~---g~-----~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~~Vin~S 133 (279)
T 1thm_A 63 -STPQNGNGHGTHCAGIAAAVTNNST---GI-----AGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLS 133 (279)
T ss_dssp -SCCCCSSSHHHHHHHHHHCCCSSSS---SC-----CCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred -CCCCCCCCcHHHHHHHHhCccCCCC---cc-----EEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCCCEEEEe
Confidence 2456789999999999999875542 22 8999999999999988765 477889999999999999999999
Q ss_pred CCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCCCccCCCCCCceEEEeeecCceeeeeEEeCCCceeeceeccc
Q 044513 180 LGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSRSTITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEGISINT 259 (457)
Q Consensus 180 ~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (457)
||... ..+.+.++++++.++|+++|+||||+|.....+++..+++|+||+.+.+
T Consensus 134 ~G~~~----~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~---------------------- 187 (279)
T 1thm_A 134 LGGTV----GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN---------------------- 187 (279)
T ss_dssp CCBSS----CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT----------------------
T ss_pred cCCCC----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC----------------------
Confidence 99873 2467888888999999999999999998888899999999999986433
Q ss_pred ccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCCCCCCC
Q 044513 260 YDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDRAFSFP 339 (457)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 339 (457)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecCCCCCc
Q 044513 340 LPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSPVNPVS 419 (457)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~ 419 (457)
+.++.||++||.. ||+|||.+|.++.+. +.|.
T Consensus 188 ---------------------------------------~~~~~fS~~G~~~--------dv~APG~~i~s~~~~-~~~~ 219 (279)
T 1thm_A 188 ---------------------------------------DNKSSFSTYGSWV--------DVAAPGSSIYSTYPT-STYA 219 (279)
T ss_dssp ---------------------------------------SCBCTTCCCCTTC--------CEEEECSSEEEEETT-TEEE
T ss_pred ---------------------------------------CCcCCcCCCCCce--------EEEEcCCCeEEEeCC-CCEE
Confidence 2468899999875 999999999999976 4577
Q ss_pred cCCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 420 EVKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 420 ~~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
.++|||||||+|||++||| ++|.|+++|||++|++|
T Consensus 220 ~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~t 255 (279)
T 1thm_A 220 SLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENT 255 (279)
T ss_dssp EECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHT
T ss_pred EcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHh
Confidence 7899999999999999999 57999999999999976
No 12
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=4.2e-49 Score=377.42 Aligned_cols=232 Identities=24% Similarity=0.363 Sum_probs=198.8
Q ss_pred CCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCCCCCC
Q 044513 25 GFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDLPSP 104 (457)
Q Consensus 25 ~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 104 (457)
.++ .+|..+++|+||+|+|||+|||++||+|.+ ++..+++|..+. ..+
T Consensus 17 ~~~-~aw~~~~~G~gv~VaViDtGvd~~h~~l~~------------------------~~~~~~~~~~~~-------~~~ 64 (284)
T 1sh7_A 17 PLD-RNYNANFDGFGVTAYVIDTGVNNNHEEFGG------------------------RSVSGYDFVDND-------ADS 64 (284)
T ss_dssp SCC-SBCCCSCCCTTCEEEEEESCCCTTCTTTTT------------------------CEEEEEETTTTB-------SCC
T ss_pred Cch-hhhhcCCCCCCCEEEEEcCCCCCCChhHcC------------------------CccccccccCCC-------CCC
Confidence 444 689999999999999999999999999964 344566666542 245
Q ss_pred CCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC-CCHHHHHHHHHHHHHC--CCcEEEecCC
Q 044513 105 RDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG-CDDADILAAFDDAIAD--GVDIISLSLG 181 (457)
Q Consensus 105 ~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~~i~~ai~~a~~~--~~~Vin~S~G 181 (457)
.|..+|||||||||+|.. .||||+|+|+.+|++++.+ ...++++++|+|+++. +++|||||||
T Consensus 65 ~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~Vin~S~G 130 (284)
T 1sh7_A 65 SDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPSVANMSLG 130 (284)
T ss_dssp CCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSSEEEEECCC
T ss_pred CCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCCcEEEeCCC
Confidence 678999999999999874 6899999999999998765 4788999999999974 6899999999
Q ss_pred CCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCC-CccCCCCCCceEEEeeecCceeeeeEEeCCCceeeceecccc
Q 044513 182 SSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSR-STITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEGISINTY 260 (457)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~-~~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (457)
.. ....+.++++++.++|++||+||||++... ..+|+..+++|+||+.+.+
T Consensus 131 ~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------------------- 182 (284)
T 1sh7_A 131 GG-----QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTSS----------------------- 182 (284)
T ss_dssp BS-----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECTT-----------------------
T ss_pred CC-----CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecCC-----------------------
Confidence 86 246788888899999999999999999754 3567889999999986433
Q ss_pred cCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCCCCCCCc
Q 044513 261 DLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDRAFSFPL 340 (457)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 340 (457)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecCCCCCcc
Q 044513 341 PTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSPVNPVSE 420 (457)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~ 420 (457)
+.++.||++||.. ||+|||++|.++.+.+ .|..
T Consensus 183 --------------------------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~-~~~~ 215 (284)
T 1sh7_A 183 --------------------------------------DSRSSFSNWGSCV--------DLFAPGSQIKSAWYDG-GYKT 215 (284)
T ss_dssp --------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTS-SEEE
T ss_pred --------------------------------------CCcCcccCCCCcc--------EEEeccCCeEEecCCC-CEEE
Confidence 2468899999976 9999999999998764 6777
Q ss_pred CCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 421 VKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 421 ~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
++|||||||+|||++|||+|++|+|+++|||++|++|
T Consensus 216 ~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~t 252 (284)
T 1sh7_A 216 ISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSR 252 (284)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhh
Confidence 8999999999999999999999999999999999865
No 13
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=4.5e-49 Score=383.34 Aligned_cols=260 Identities=32% Similarity=0.364 Sum_probs=208.2
Q ss_pred ccccCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCC
Q 044513 21 WDFMGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDD 100 (457)
Q Consensus 21 ~~~~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 100 (457)
.+.++++ .+|..+++|+||+|+|||+|||++||+|.+ ++...++|...... .
T Consensus 10 l~~i~~~-~~w~~~~~G~gv~VaViDtGvd~~H~~l~~------------------------~~~~~~~~~~~~~~---~ 61 (310)
T 2ixt_A 10 IKAIYNN-DTLTSTTGGSGINIAVLDTGVNTSHPDLVN------------------------NVEQCKDFTGATTP---I 61 (310)
T ss_dssp HHHHHTC-TTCCCCCCCTTCEEEEEESCCCTTCTTTTT------------------------TEEEEEESSSSSSC---E
T ss_pred hhhcCch-hhhhccCCCCCcEEEEEecCCCCCCHHHhh------------------------cccccccccCCCCC---C
Confidence 3566777 899999999999999999999999999965 34455666544211 1
Q ss_pred CCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC-CCHHHHHHHHHHHHHCCC-----c
Q 044513 101 LPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG-CDDADILAAFDDAIADGV-----D 174 (457)
Q Consensus 101 ~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~~i~~ai~~a~~~~~-----~ 174 (457)
.....|..+|||||||||++...++. .| +.||||+|+|+.+|++.+.+ ...++++++|+|+++.++ +
T Consensus 62 ~~~~~d~~gHGT~vAgiia~~~~~n~--~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~ 134 (310)
T 2ixt_A 62 NNSCTDRNGHGTHVAGTALADGGSDQ--AG-----IYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTKT 134 (310)
T ss_dssp ETCCCCSSSHHHHHHHHHHCBCCTTS--CS-----CBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHHTCCE
T ss_pred CCCCCCCCCCHHHHHHHHhccCCCCC--Cc-----eEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhhhccCCCe
Confidence 12346789999999999999863221 12 38999999999999998765 478899999999999877 9
Q ss_pred EEEecCCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCC--CCccCCCCCCceEEEeeecCceeeeeEEeCCCcee
Q 044513 175 IISLSLGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPS--RSTITNVAPWFISVAASTIDRKFSTKVQLGNNNIY 252 (457)
Q Consensus 175 Vin~S~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~--~~~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~ 252 (457)
|||||||.... ...+..+++++.++|++||+||||+|.. ...+|+..+++|+||+.+.... ++
T Consensus 135 Vin~S~G~~~~----~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~--------~g--- 199 (310)
T 2ixt_A 135 IISMSLGSSAN----NSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ--------NG--- 199 (310)
T ss_dssp EEEECCCBSSC----CHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE--------TT---
T ss_pred EEEEcCCCCCC----CHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc--------CC---
Confidence 99999998732 4678888889999999999999999965 4567888999999998652100 00
Q ss_pred eceecccccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCC
Q 044513 253 EGISINTYDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRR 332 (457)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 332 (457)
T Consensus 200 -------------------------------------------------------------------------------- 199 (310)
T 2ixt_A 200 -------------------------------------------------------------------------------- 199 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCcceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCC-----CCCCCceeecCcc
Q 044513 333 DRAFSFPLPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITP-----DILKPDISAPGID 407 (457)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~-----~~~KPdi~APG~~ 407 (457)
...++.||++||... + .+.||||+|||.+
T Consensus 200 ---------------------------------------------~~~~~~~S~~G~~~~-~g~~~~~~~~~di~ApG~~ 233 (310)
T 2ixt_A 200 ---------------------------------------------TYRVADYSSRGYIST-AGDYVIQEGDIEISAPGSS 233 (310)
T ss_dssp ---------------------------------------------EEEECTTSCCCCTTT-TTSSSCCTTCCCEEEECSS
T ss_pred ---------------------------------------------CeeeccccCCCCccC-CccccccCCCeeEECCCCC
Confidence 003578999998531 2 2359999999999
Q ss_pred EEeeecCCCCCccCCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 408 ILAAWSPVNPVSEVKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 408 i~s~~~~~~~~~~~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
|+++.+. +.|..++|||||||+|||++|||+|++|+|+++|||++|++|
T Consensus 234 i~s~~~~-~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~t 282 (310)
T 2ixt_A 234 VYSTWYN-GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQER 282 (310)
T ss_dssp EEEECTT-SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHH
T ss_pred EeeecCC-CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhh
Confidence 9999876 467778999999999999999999999999999999999875
No 14
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=2.9e-49 Score=386.31 Aligned_cols=246 Identities=26% Similarity=0.370 Sum_probs=199.9
Q ss_pred ccccCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCC
Q 044513 21 WDFMGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDD 100 (457)
Q Consensus 21 ~~~~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 100 (457)
.+.++++ .+|..+++|+||+|+|||||||++||+|.+ ++..+.+|..+....
T Consensus 25 l~~i~~~-~aw~~~~~G~gv~VaViDtGid~~Hp~l~~------------------------~~~~~~~~~~~~~~~--- 76 (327)
T 2x8j_A 25 VEIVEAP-AVWRASAKGAGQIIGVIDTGCQVDHPDLAE------------------------RIIGGVNLTTDYGGD--- 76 (327)
T ss_dssp HHHTTHH-HHHHHHGGGTTCEEEEEESCCCTTCTTTGG------------------------GEEEEEECSSGGGGC---
T ss_pred hhhcChH-HHHhcCCCCCCCEEEEEcCCCCCCChhHhh------------------------cccCCccccCCCCCC---
Confidence 3566777 899999999999999999999999999964 455566666542111
Q ss_pred CCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC-CCHHHHHHHHHHHHH------CCC
Q 044513 101 LPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG-CDDADILAAFDDAIA------DGV 173 (457)
Q Consensus 101 ~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~~i~~ai~~a~~------~~~ 173 (457)
.....|..+|||||||||+|.. ++ .| +.||||+|+|+.+|+++..+ ...++++++|+||++ .++
T Consensus 77 ~~~~~d~~gHGT~VAgiia~~~-~~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~ 147 (327)
T 2x8j_A 77 ETNFSDNNGHGTHVAGTVAAAE-TG---SG-----VVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQM 147 (327)
T ss_dssp TTCCCCSSSHHHHHHHHHHCCC-CS---SB-----CCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCCTTSCCC
T ss_pred CCCCCCCCCchHHHHHHHhccC-CC---CC-----cEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcccccCCc
Confidence 1234678999999999999984 22 12 28999999999999998765 477889999999999 899
Q ss_pred cEEEecCCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCC-----CCccCCCCCCceEEEeeecCceeeeeEEeCC
Q 044513 174 DIISLSLGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPS-----RSTITNVAPWFISVAASTIDRKFSTKVQLGN 248 (457)
Q Consensus 174 ~Vin~S~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~-----~~~~~~~~~~~i~Vga~~~~~~~~~~~~~~~ 248 (457)
+|||||||.... ...+..+++++.++|++||+||||+|.. ...+|+..+++|+||+.+.+
T Consensus 148 ~Vin~S~G~~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~----------- 212 (327)
T 2x8j_A 148 RIITMSLGGPTD----SEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD----------- 212 (327)
T ss_dssp SEEEECEEBSCC----CHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECTT-----------
T ss_pred eEEEECCCcCCC----CHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCC-----------
Confidence 999999998632 4678888889999999999999999965 34678888999999986533
Q ss_pred CceeeceecccccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEec
Q 044513 249 NNIYEGISINTYDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQG 328 (457)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~ 328 (457)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCcceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccE
Q 044513 329 QRRRDRAFSFPLPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDI 408 (457)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i 408 (457)
+.++.||++||.. ||+|||.+|
T Consensus 213 --------------------------------------------------~~~~~fS~~G~~~--------di~APG~~i 234 (327)
T 2x8j_A 213 --------------------------------------------------LRLSDFTNTNEEI--------DIVAPGVGI 234 (327)
T ss_dssp --------------------------------------------------CCBSCC---CCCC--------SEEEECSSE
T ss_pred --------------------------------------------------CCCCCccCCCCCc--------eEecCcCce
Confidence 2468899999865 999999999
Q ss_pred EeeecCCCCCccCCcchhhHHHHHHHHHHHHHh-----CCCCCHHHHHHHHhcC
Q 044513 409 LAAWSPVNPVSEVKGTSMACPHVTGAAAYIKSF-----HPTWSPAAIKSALMTT 457 (457)
Q Consensus 409 ~s~~~~~~~~~~~sGTSmAaP~VAG~aALl~~~-----~P~lt~~~i~~~L~~T 457 (457)
.++.+. +.|..++|||||||+|||++|||+|+ +|.|++.|||++|++|
T Consensus 235 ~s~~~~-~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~t 287 (327)
T 2x8j_A 235 KSTYLD-SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRR 287 (327)
T ss_dssp EEECST-TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTT
T ss_pred EeecCC-CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHh
Confidence 999876 45777899999999999999999999 9999999999999986
No 15
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=8e-49 Score=374.93 Aligned_cols=233 Identities=26% Similarity=0.381 Sum_probs=198.4
Q ss_pred CCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCCCCCC
Q 044513 25 GFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDLPSP 104 (457)
Q Consensus 25 ~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 104 (457)
.++ .+|..+++|+||+|+|||+|||++||+|.+ ++..+++|.++. ..+
T Consensus 19 ~~~-~~~~~~~~G~gv~VaViDtGid~~Hpdl~~------------------------~~~~~~d~~~~~-------~~~ 66 (278)
T 2b6n_A 19 PLD-NNYHTDYDGSGVTAFVIDTGVLNTHNEFGG------------------------RASSGYDFIDND-------YDA 66 (278)
T ss_dssp SCC-SEEECSCCCTTCEEEEEESCCCTTCGGGTT------------------------CEEEEEETTTTB-------SCC
T ss_pred Ccc-hhcccCCCCCCCEEEEEeCCCCCCChhHhc------------------------ccccCeecCCCC-------CCC
Confidence 444 689999999999999999999999999965 334556666542 245
Q ss_pred CCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC-CCHHHHHHHHHHHHH--CCCcEEEecCC
Q 044513 105 RDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG-CDDADILAAFDDAIA--DGVDIISLSLG 181 (457)
Q Consensus 105 ~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~~i~~ai~~a~~--~~~~Vin~S~G 181 (457)
.|..+|||||||||+|.. .||||+|+|+.+|++++.+ ...++++++|+|+++ .+++|||||||
T Consensus 67 ~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~Vin~S~G 132 (278)
T 2b6n_A 67 TDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPAVANMSLG 132 (278)
T ss_dssp CCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCC
T ss_pred CCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCeEEEECCC
Confidence 678999999999999873 7899999999999998765 578899999999997 58999999999
Q ss_pred CCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCCC-ccCCCCCCceEEEeeecCceeeeeEEeCCCceeeceecccc
Q 044513 182 SSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSRS-TITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEGISINTY 260 (457)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~-~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (457)
... ...+.++++++.++|++||+||||++.... .+|+..+++|+||+.+.+
T Consensus 133 ~~~-----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------------------- 184 (278)
T 2b6n_A 133 GGA-----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSN----------------------- 184 (278)
T ss_dssp EEC-----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-----------------------
T ss_pred CCc-----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCCC-----------------------
Confidence 863 467888888999999999999999997654 457889999999986433
Q ss_pred cCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCCCCCCCc
Q 044513 261 DLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDRAFSFPL 340 (457)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 340 (457)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecCC-CCCc
Q 044513 341 PTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSPV-NPVS 419 (457)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~~-~~~~ 419 (457)
+.++.||++||.. ||+|||.+|.+++... ..|.
T Consensus 185 --------------------------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~~~~~~ 218 (278)
T 2b6n_A 185 --------------------------------------DSRSSFSNYGTCL--------DIYAPGSSITSSWYTSNSATN 218 (278)
T ss_dssp --------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTSTTCEE
T ss_pred --------------------------------------CCcCCcCCCCCCC--------eEEeCCCCeECcccCCCCCEE
Confidence 2468899999865 9999999999988653 5677
Q ss_pred cCCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 420 EVKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 420 ~~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
.++|||||||+|||++|||+|++|+|+++|||++|++|
T Consensus 219 ~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~t 256 (278)
T 2b6n_A 219 TISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTR 256 (278)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred EeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 78999999999999999999999999999999999864
No 16
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=1.6e-49 Score=398.47 Aligned_cols=264 Identities=27% Similarity=0.377 Sum_probs=216.0
Q ss_pred CCCeEEEecCCccccccc--------------Ccc--cccCCchhcccCCCCCCC--eEEEEeecccCCCCCCCCCCCCC
Q 044513 1 MGGVVSVFPNRKRKLHTT--------------RSW--DFMGFSQQVERSTTEESD--IVIGVFDTGIWPESESFNGTGFG 62 (457)
Q Consensus 1 ~~~V~~v~~~~~~~~~~~--------------~s~--~~~~~~~~~~~~g~~G~g--v~V~ViDtGid~~Hp~f~~~~~~ 62 (457)
+|+|++|++++.++++.. ..| +.++++ .+|..+ +|+| |+|+|||||||++||+|.+
T Consensus 51 ~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~-~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~---- 124 (395)
T 2z2z_A 51 MPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVKAP-SVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAA---- 124 (395)
T ss_dssp STTEEEEEECCEEEECCEECC------CCSCCCCHHHHHTTCG-GGGGTC-SSCCTTCEEEEEESCBCTTCTTTGG----
T ss_pred CCCceEEEEeeeecccCCCCcccccccCccccCCcchhhcCHH-HHHhhc-CCCCCcEEEEEEcCCCCCCChhHhh----
Confidence 589999999998876432 223 345666 789988 9999 9999999999999999965
Q ss_pred CCCCccccccccCCccccccceeEEEeccCCCCCCCCCCCCCCCCCCCcchhhhhcccccCccccccccCCccccccccc
Q 044513 63 PPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDLPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPS 142 (457)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~ 142 (457)
++..+.+|..+... .......|..+|||||||||+|.. ++ .|+ .||||+
T Consensus 125 --------------------~~~~~~~~~~~~~~--~~~~~~~d~~gHGT~vAgiia~~~-n~---~g~-----~GvAp~ 173 (395)
T 2z2z_A 125 --------------------NIAWCVSTLRGKVS--TKLRDCADQNGHGTHVIGTIAALN-ND---IGV-----VGVAPG 173 (395)
T ss_dssp --------------------GEEEEEECGGGCCB--CCHHHHBCSSSHHHHHHHHHHCCC-SS---SSC-----CCSSTT
T ss_pred --------------------ccccCccccCCccc--CCCCCCCCCCCCHHHHHHHHHeec-CC---Cce-----EEECCC
Confidence 34445555443210 000124578999999999999983 22 233 899999
Q ss_pred ccEEEeeeecCCC-CCHHHHHHHHHHHHHC--------------------CCcEEEecCCCCCCCCCccchHHHHHHHhh
Q 044513 143 ARIAVYKICWSDG-CDDADILAAFDDAIAD--------------------GVDIISLSLGSSNPHEYFNDSIAIGTFHAM 201 (457)
Q Consensus 143 A~l~~~kv~~~~~-~~~~~i~~ai~~a~~~--------------------~~~Vin~S~G~~~~~~~~~~~~~~~~~~a~ 201 (457)
|+|+.+|++++.+ ...++++++|+||++. +++|||||||.... ...+..+++++.
T Consensus 174 a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~----~~~~~~ai~~a~ 249 (395)
T 2z2z_A 174 VQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD----DSYLYDMIIQAY 249 (395)
T ss_dssp CEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSCC----CHHHHHHHHHHH
T ss_pred CEEEEEEEecCCCCccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCCC----CHHHHHHHHHHH
Confidence 9999999998766 4778899999999988 99999999998632 357788888899
Q ss_pred hCCcEEEEecCCCCCCCCccCCCCCCceEEEeeecCceeeeeEEeCCCceeeceecccccCCCceeeeEecCCCCCCCCC
Q 044513 202 RNGILTSASAGNDGPSRSTITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEGISINTYDLQNVTYPLIYGGDAANISGG 281 (457)
Q Consensus 202 ~~gi~vV~AAGN~g~~~~~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (457)
++|+++|+||||+|.....+|+..+++|+||+.+.+
T Consensus 250 ~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------------------------------------- 285 (395)
T 2z2z_A 250 NAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN-------------------------------------------- 285 (395)
T ss_dssp HTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT--------------------------------------------
T ss_pred HCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecCC--------------------------------------------
Confidence 999999999999998888899999999999986433
Q ss_pred cCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCCCCCCCcceEeeccccHHHHHHHHHhCC
Q 044513 282 FTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDRAFSFPLPTSYVDTNDGSDILLYINSTR 361 (457)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (457)
T Consensus 286 -------------------------------------------------------------------------------- 285 (395)
T 2z2z_A 286 -------------------------------------------------------------------------------- 285 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecCCCCCccCCcchhhHHHHHHHHHHHHHh
Q 044513 362 NATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSPVNPVSEVKGTSMACPHVTGAAAYIKSF 441 (457)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~~sGTSmAaP~VAG~aALl~~~ 441 (457)
+.+++||++|| +|+|||.+|+++++. +.|..++|||||||+|||++|||+|+
T Consensus 286 -----------------~~~a~fS~~G~----------~v~APG~~i~s~~~~-~~y~~~sGTS~AaP~VaG~aAll~~~ 337 (395)
T 2z2z_A 286 -----------------DNIASFSNRQP----------EVSAPGVDILSTYPD-DSYETLMGTAMATPHVSGVVALIQAA 337 (395)
T ss_dssp -----------------SCBCTTSCSSC----------SEEEECSSEEEEETT-TEEEEEESHHHHHHHHHHHHHHHHHH
T ss_pred -----------------CCCCcccCCCC----------CEEeCCCCeeeecCC-CceEecCCHHHHHHHHHHHHHHHHHh
Confidence 24689999997 679999999999976 45777899999999999999999999
Q ss_pred CC-------------CCCHHHHHHHHhcC
Q 044513 442 HP-------------TWSPAAIKSALMTT 457 (457)
Q Consensus 442 ~P-------------~lt~~~i~~~L~~T 457 (457)
+| .|++.|||++|++|
T Consensus 338 ~p~~~~~~~~~~~~~~ls~~~v~~~L~~t 366 (395)
T 2z2z_A 338 YYQKYGKILPVGTFDDISKNTVRGILHIT 366 (395)
T ss_dssp HHHHHSSCCCCCCTTCCSSSSHHHHHHHH
T ss_pred CccccccccccccccCCCHHHHHHHHHhh
Confidence 99 99999999999865
No 17
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=1.2e-48 Score=373.77 Aligned_cols=232 Identities=25% Similarity=0.378 Sum_probs=199.8
Q ss_pred cCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCCCCC
Q 044513 24 MGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDLPS 103 (457)
Q Consensus 24 ~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 103 (457)
+++. .+|..+++|+||+|+|||+|||++||+|.+ ++...++|... .
T Consensus 18 ~~~~-~a~~~~~~G~gv~VaViDtGvd~~h~~l~~------------------------~~~~~~~~~~~---------~ 63 (276)
T 4dzt_A 18 LPLS-NSYTYTATGRGVNVYVIDTGIRTTHREFGG------------------------RARVGYDALGG---------N 63 (276)
T ss_dssp SSCC-SCEECSCCCTTCEEEEEESCCCTTCGGGTT------------------------CEEEEEETTSS---------C
T ss_pred CCcc-cceecCCCCCCcEEEEEccCCCCCChhHcc------------------------CeeccccCCCC---------C
Confidence 4555 789999999999999999999999999964 34445555542 4
Q ss_pred CCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC-CCHHHHHHHHHHHHHC--CCcEEEecC
Q 044513 104 PRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG-CDDADILAAFDDAIAD--GVDIISLSL 180 (457)
Q Consensus 104 ~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~~i~~ai~~a~~~--~~~Vin~S~ 180 (457)
..|..+|||||||||+|.. .|+||+|+|+.+|++++.+ ...+.++++++|+.+. +++||||||
T Consensus 64 ~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~vin~S~ 129 (276)
T 4dzt_A 64 GQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRRPAVANMSL 129 (276)
T ss_dssp SCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECC
T ss_pred CCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 5578899999999999874 7899999999999998766 5888999999999987 899999999
Q ss_pred CCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCCCc-cCCCCCCceEEEeeecCceeeeeEEeCCCceeeceeccc
Q 044513 181 GSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSRST-ITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEGISINT 259 (457)
Q Consensus 181 G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~-~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (457)
|... ...+.++++++.++|+++|+||||++..... +++..+++|+||+.+.+
T Consensus 130 g~~~-----~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---------------------- 182 (276)
T 4dzt_A 130 GGGV-----STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTSS---------------------- 182 (276)
T ss_dssp CEEC-----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT----------------------
T ss_pred CCCC-----CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECCC----------------------
Confidence 9752 4678888889999999999999999976544 47889999999986433
Q ss_pred ccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCCCCCCC
Q 044513 260 YDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDRAFSFP 339 (457)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 339 (457)
T Consensus 183 -------------------------------------------------------------------------------- 182 (276)
T 4dzt_A 183 -------------------------------------------------------------------------------- 182 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecCC-CCC
Q 044513 340 LPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSPV-NPV 418 (457)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~~-~~~ 418 (457)
+.+++||++||.. ||+|||.+|.++.... ..+
T Consensus 183 ---------------------------------------~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~~~~~ 215 (276)
T 4dzt_A 183 ---------------------------------------DARASFSNYGSCV--------DLFAPGASIPSAWYTSDTAT 215 (276)
T ss_dssp ---------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTSSSCE
T ss_pred ---------------------------------------CCcCCcCCCCCCc--------eEEeCCCCeEccccCCCCce
Confidence 2568899999987 9999999999998765 467
Q ss_pred ccCCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 419 SEVKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 419 ~~~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
..++|||||||+|||++|||+|++|+|+++|||++|++|
T Consensus 216 ~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~t 254 (276)
T 4dzt_A 216 QTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNG 254 (276)
T ss_dssp EEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred EEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhh
Confidence 778999999999999999999999999999999999875
No 18
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=1.7e-48 Score=408.56 Aligned_cols=270 Identities=27% Similarity=0.340 Sum_probs=208.9
Q ss_pred CCCeEEEecCCcccccc------------------------------cCcc--cccCCchhc-ccCCCCCCCeEEEEeec
Q 044513 1 MGGVVSVFPNRKRKLHT------------------------------TRSW--DFMGFSQQV-ERSTTEESDIVIGVFDT 47 (457)
Q Consensus 1 ~~~V~~v~~~~~~~~~~------------------------------~~s~--~~~~~~~~~-~~~g~~G~gv~V~ViDt 47 (457)
+|+|++|||++.+++.. ...| +.++++ .+ |.. ++|+||+||||||
T Consensus 86 ~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~~~-~a~w~~-~tG~gV~VAVIDT 163 (671)
T 1r6v_A 86 LKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGVT-QQLWEE-ASGTNIIVAVVDT 163 (671)
T ss_dssp CSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTTCC-HHHHHH-CSCTTCEEEEEES
T ss_pred CCCceEEecCeEEEeccccccCcccccccccccccccccccccccccccCCchhccCCc-hhhhhc-cCCCCCEEEEEeC
Confidence 47999999997765431 0112 345666 45 877 9999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCCCCCCCCCCCCcchhhhhcccccCcccc
Q 044513 48 GIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDLPSPRDTDGHGSHTASTAAGNLVSMAS 127 (457)
Q Consensus 48 Gid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGi~ag~~~~~~~ 127 (457)
|||++||+|.+... .++.+..+... +. .....+..+|||||||||+|.. ++
T Consensus 164 GVd~~HpdL~~~~~------------------------~g~~~~~~~~~-p~-~~d~~d~~gHGThVAGiIAa~~-ng-- 214 (671)
T 1r6v_A 164 GVDGTHPDLEGQVI------------------------AGYRPAFDEEL-PA-GTDSSYGGSAGTHVAGTIAAKK-DG-- 214 (671)
T ss_dssp CCBTTSGGGTTTBC------------------------CEEEGGGTEEE-CT-TCBCCTTCSHHHHHHHHHHCCC-SS--
T ss_pred CCCCCCccccccEE------------------------ecccccCCCcC-CC-CCCCccCCCcchhhhhhhhccC-CC--
Confidence 99999999976321 11111111000 00 0123457899999999999974 22
Q ss_pred ccccCCcccccccccccEEEeeeecC------CC-CCHHHHHHHHHHHHHCCCcEEEecCCCCCCCCCccchHHHHHHHh
Q 044513 128 LYGFSSGTARGCVPSARIAVYKICWS------DG-CDDADILAAFDDAIADGVDIISLSLGSSNPHEYFNDSIAIGTFHA 200 (457)
Q Consensus 128 ~~g~~~~~~~GvAP~A~l~~~kv~~~------~~-~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~a 200 (457)
.|+ .||||+|+|+.+|+++. .+ .....++++|+||++++++|||||||... ....+.++++++
T Consensus 215 -~gv-----~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~----~s~~l~~Ai~~A 284 (671)
T 1r6v_A 215 -KGI-----VGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG----YSYTMKEAFDYA 284 (671)
T ss_dssp -SSC-----CCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC----CCHHHHHHHHHH
T ss_pred -Cce-----EEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC----CCHHHHHHHHHH
Confidence 233 89999999999999876 12 24567899999999999999999999762 235788888899
Q ss_pred hhCCcEEEEecCCCCCCC-CccCCCCCCceEEEeeecCceeeeeEEeCCCceeeceecccccCCCceeeeEecCCCCCCC
Q 044513 201 MRNGILTSASAGNDGPSR-STITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEGISINTYDLQNVTYPLIYGGDAANIS 279 (457)
Q Consensus 201 ~~~gi~vV~AAGN~g~~~-~~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (457)
.++|+++|+||||+|... ..+|+..+++|+||+.+.+..
T Consensus 285 ~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~---------------------------------------- 324 (671)
T 1r6v_A 285 MEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG---------------------------------------- 324 (671)
T ss_dssp HHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT----------------------------------------
T ss_pred HhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC----------------------------------------
Confidence 999999999999999765 678889999999999654310
Q ss_pred CCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCCCCCCCcceEeeccccHHHHHHHHHh
Q 044513 280 GGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDRAFSFPLPTSYVDTNDGSDILLYINS 359 (457)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (457)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecCC-----------------CCCccCC
Q 044513 360 TRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSPV-----------------NPVSEVK 422 (457)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~~-----------------~~~~~~s 422 (457)
...++.||++||.. ||+|||.+|+++.+.. +.|..++
T Consensus 325 ------------------~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~s 378 (671)
T 1r6v_A 325 ------------------TFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQ 378 (671)
T ss_dssp ------------------EEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEE
T ss_pred ------------------ceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccCCCceEEec
Confidence 01368999999986 9999999999998642 2566779
Q ss_pred cchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 423 GTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 423 GTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
|||||||||||++|||+|++|+|+++|||++|++|
T Consensus 379 GTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~T 413 (671)
T 1r6v_A 379 GTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENT 413 (671)
T ss_dssp SHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999865
No 19
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=1.5e-48 Score=396.60 Aligned_cols=261 Identities=28% Similarity=0.342 Sum_probs=208.2
Q ss_pred CcccccCCchhccc-CCCCCCCeEEEEeecccCC------CCCCCCCCCCCCCCCccccccccCCccccccceeEEEecc
Q 044513 19 RSWDFMGFSQQVER-STTEESDIVIGVFDTGIWP------ESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYK 91 (457)
Q Consensus 19 ~s~~~~~~~~~~~~-~g~~G~gv~V~ViDtGid~------~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 91 (457)
.+.+.++++ .+|+ .+++|+||+|||||||||. +||+|.+ ++...++|.
T Consensus 3 ~a~~~i~~~-~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~------------------------~i~~~~~~~ 57 (434)
T 1wmd_A 3 VARGIVKAD-VAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRG------------------------KITALYALG 57 (434)
T ss_dssp HHHHHTTHH-HHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTT------------------------CEEEEEETT
T ss_pred hHhhhhCch-hhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCC------------------------CEeeecccc
Confidence 355778888 7887 8999999999999999999 7999964 445556665
Q ss_pred CCCCCCCCCCCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCCC---CHHHHHHHHHHH
Q 044513 92 SDGEFGPDDLPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDGC---DDADILAAFDDA 168 (457)
Q Consensus 92 ~~~~~~~~~~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~---~~~~i~~ai~~a 168 (457)
+. ..+.|..+|||||||||+|++.. +.||||+|+|+++|+++..+. ..+++.++|+++
T Consensus 58 ~~--------~~~~d~~gHGT~VAgiiag~g~~-----------~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a 118 (434)
T 1wmd_A 58 RT--------NNANDTNGHGTHVAGSVLGNGST-----------NKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQA 118 (434)
T ss_dssp TT--------TCCCCSSSHHHHHHHHHHCCSSS-----------SCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHH
T ss_pred CC--------CCCCCCCCcHHHHHHHHHcCCCC-----------ceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHH
Confidence 43 24567899999999999987421 389999999999999876553 356789999999
Q ss_pred HHCCCcEEEecCCCCCCCCCccchHHHHHHHh-hhCCcEEEEecCCCCCCC--CccCCCCCCceEEEeeecCceeeeeEE
Q 044513 169 IADGVDIISLSLGSSNPHEYFNDSIAIGTFHA-MRNGILTSASAGNDGPSR--STITNVAPWFISVAASTIDRKFSTKVQ 245 (457)
Q Consensus 169 ~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~a-~~~gi~vV~AAGN~g~~~--~~~~~~~~~~i~Vga~~~~~~~~~~~~ 245 (457)
++.+++|||||||..... ..+...++++++ .++|++||+||||+|... ..+|+..+++|+||+.+..+...
T Consensus 119 ~~~g~~Vin~S~G~~~~~--~~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~---- 192 (434)
T 1wmd_A 119 YSAGARIHTNSWGAAVNG--AYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF---- 192 (434)
T ss_dssp HHTTCSEEEECCCBCCTT--CCCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG----
T ss_pred HhcCCeEEEecCCCCcCC--cCCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc----
Confidence 999999999999987321 224556667665 579999999999999753 46778899999999975431000
Q ss_pred eCCCceeeceecccccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEE
Q 044513 246 LGNNNIYEGISINTYDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGAL 325 (457)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~ 325 (457)
+ . +
T Consensus 193 --------~----------~-~---------------------------------------------------------- 195 (434)
T 1wmd_A 193 --------G----------S-Y---------------------------------------------------------- 195 (434)
T ss_dssp --------C----------G-G----------------------------------------------------------
T ss_pred --------C----------c-c----------------------------------------------------------
Confidence 0 0 0
Q ss_pred EecCCCCCCCCCCCcceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecC
Q 044513 326 MQGQRRRDRAFSFPLPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPG 405 (457)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG 405 (457)
....+.+++||++||+. ++++||||+|||
T Consensus 196 -------------------------------------------------~~~~~~~a~fS~~G~~~--~g~~kpdi~ApG 224 (434)
T 1wmd_A 196 -------------------------------------------------ADNINHVAQFSSRGPTK--DGRIKPDVMAPG 224 (434)
T ss_dssp -------------------------------------------------GSCTTSBCTTSCCCCCT--TSCCCCCEEEEC
T ss_pred -------------------------------------------------cCCCCccccccCCCCCC--CCCCCceEEcCC
Confidence 01124689999999999 999999999999
Q ss_pred ccEEeeecC-----------CCCCccCCcchhhHHHHHHHHHHHHHhCCCC-----CHHHHHHHHhcC
Q 044513 406 IDILAAWSP-----------VNPVSEVKGTSMACPHVTGAAAYIKSFHPTW-----SPAAIKSALMTT 457 (457)
Q Consensus 406 ~~i~s~~~~-----------~~~~~~~sGTSmAaP~VAG~aALl~~~~P~l-----t~~~i~~~L~~T 457 (457)
++|+++.+. ...|..++|||||||+|||++|||+|++|++ ++++||++|++|
T Consensus 225 ~~i~s~~~~~~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~t 292 (434)
T 1wmd_A 225 TFILSARSSLAPDSSFWANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAG 292 (434)
T ss_dssp SSEEEECCTTCCGGGSSEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHH
T ss_pred CCeEecCCCCCCCcccccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcC
Confidence 999998753 3456778999999999999999999999865 999999999864
No 20
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=1e-48 Score=375.62 Aligned_cols=238 Identities=23% Similarity=0.272 Sum_probs=193.6
Q ss_pred CCCC-CCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCCCCCCCCCCCCcc
Q 044513 34 TTEE-SDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDLPSPRDTDGHGS 112 (457)
Q Consensus 34 g~~G-~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~gHGT 112 (457)
.++| +||+|||||||||++||+|.+.. .....+.... ......+..+|||
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~~------------------------~~~~~~~~~~-----~~~~d~~~~gHGT 53 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGAD------------------------LTVLPTLAPT-----AARSDGFMSAHGT 53 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTCE------------------------EEECCCSSCC-----CCCTTCHHHHHHH
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCCe------------------------eecCcCCCCC-----CCCCCCCCCCccc
Confidence 4688 69999999999999999997532 1122222111 1112234578999
Q ss_pred hhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC--CCHHHHHHHHHHHHHCCCcEEEecCCCCCCCCCcc
Q 044513 113 HTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG--CDDADILAAFDDAIADGVDIISLSLGSSNPHEYFN 190 (457)
Q Consensus 113 hVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~--~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~ 190 (457)
||||||+|+..+ + +.||||+|+|+.+|++.+.. .....++++|+||++.+++|||||||.........
T Consensus 54 ~VAGiiag~~~~-----~-----~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~ 123 (282)
T 3zxy_A 54 HVASIIFGQPET-----S-----VPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGELTDFGEAD 123 (282)
T ss_dssp HHHHHHHCCTTS-----S-----SCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCC
T ss_pred ceeehhhccCCc-----e-----eeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCcccccccccc
Confidence 999999997532 2 38999999999999986543 47788999999999999999999999764444556
Q ss_pred chHHHHHHHhhhCCcEEEEecCCCCCCCCccCCCCCCceEEEeeecCceeeeeEEeCCCceeeceecccccCCCceeeeE
Q 044513 191 DSIAIGTFHAMRNGILTSASAGNDGPSRSTITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEGISINTYDLQNVTYPLI 270 (457)
Q Consensus 191 ~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (457)
..+..++.++.++|+++|+||||+|.....+++..+++|+||+.+.+
T Consensus 124 ~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~--------------------------------- 170 (282)
T 3zxy_A 124 GWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH--------------------------------- 170 (282)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT---------------------------------
T ss_pred HHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC---------------------------------
Confidence 77888889999999999999999999888899999999999986433
Q ss_pred ecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCCCCCCCcceEeeccccH
Q 044513 271 YGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDRAFSFPLPTSYVDTNDG 350 (457)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (457)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecCCCCCccCCcchhhHHH
Q 044513 351 SDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSPVNPVSEVKGTSMACPH 430 (457)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~~sGTSmAaP~ 430 (457)
+.++.||++|+.. .||||+|||.+|+++.+. +.|..++|||||||+
T Consensus 171 ----------------------------~~~~~~S~~~~~~-----~~~di~ApG~~i~s~~~~-~~~~~~sGTS~AaP~ 216 (282)
T 3zxy_A 171 ----------------------------GHPLDFSNWGSTY-----EQQGILAPGEDILGAKPG-GGTERLSGTAFATPI 216 (282)
T ss_dssp ----------------------------SCBCSSSCCCHHH-----HHHEEEEECSSEEEECTT-SCEEEECSHHHHHHH
T ss_pred ----------------------------CccccccCCCCCc-----cccceeccCcceeeecCC-CceeecCCCcccchH
Confidence 2467889988753 578999999999999877 457778999999999
Q ss_pred HHHHHHHHHHhC----CCCCHHHHHHHHhcC
Q 044513 431 VTGAAAYIKSFH----PTWSPAAIKSALMTT 457 (457)
Q Consensus 431 VAG~aALl~~~~----P~lt~~~i~~~L~~T 457 (457)
|||++|||+|++ |.++++|||++|++|
T Consensus 217 vaG~aAll~~~~~~~~~~~~~~~vk~~L~~t 247 (282)
T 3zxy_A 217 VSGVAALLLSEQVRRGETPDPQKVRQLLLQS 247 (282)
T ss_dssp HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHhhCCCCCHHHHHHHHHhh
Confidence 999999999974 789999999999875
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=3e-48 Score=383.35 Aligned_cols=251 Identities=23% Similarity=0.237 Sum_probs=202.8
Q ss_pred ccccCCchhcccCCCCCC--CeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCC
Q 044513 21 WDFMGFSQQVERSTTEES--DIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGP 98 (457)
Q Consensus 21 ~~~~~~~~~~~~~g~~G~--gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 98 (457)
.+.++++ .+|+. ++|+ ||+|||||+||| +||+|.+ ++..+++|..+....
T Consensus 27 l~~i~~~-~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~------------------------~~~~~~~~~~~~~~~- 78 (347)
T 2iy9_A 27 FDAIGLT-ETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSD------------------------SEFAKFSFTQDGSPF- 78 (347)
T ss_dssp HHHHTCC-HHHHH-TSCTTSCCEEEEEESCCC-CCGGGTT------------------------CEEEEEECBTTCCSS-
T ss_pred hhhCChH-HHHHH-hcCCCCCCEEEEEcCCCc-CChhhhc------------------------CcccCCcccCCCCCC-
Confidence 3467777 78888 9999 999999999999 9999964 345566666543211
Q ss_pred CCCCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCCCCHHHHHHHHHHHHHC------C
Q 044513 99 DDLPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDGCDDADILAAFDDAIAD------G 172 (457)
Q Consensus 99 ~~~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~i~~ai~~a~~~------~ 172 (457)
......|..+|||||||||+|+ .|+ .||||+|+|+.+|++++.+.. +++++|+||++. +
T Consensus 79 -~~~~~~d~~gHGT~vAgiia~~-------~g~-----~GvAp~a~l~~~~v~~~~~~~--~~~~ai~~a~~~~~~~~~~ 143 (347)
T 2iy9_A 79 -PVKKSEALYIHGTAMASLIASR-------YGI-----YGVYPHALISSRRVIPDGVQD--SWIRAIESIMSNVFLAPGE 143 (347)
T ss_dssp -CCSSSHHHHHHHHHHHHHHHCS-------SSS-----CCSSTTCEEEEEECCSSBCTT--HHHHHHHHHHTCTTSCTTE
T ss_pred -CCCCCCCCCCcHHHHHHHHhcc-------cCC-----cccCCCCEEEEEEEecCCCHH--HHHHHHHHHHhhhhcccCC
Confidence 1124456889999999999998 233 899999999999998765544 899999999999 9
Q ss_pred CcEEEecCCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCC-------CCccCCCCC----------CceEEEeee
Q 044513 173 VDIISLSLGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPS-------RSTITNVAP----------WFISVAAST 235 (457)
Q Consensus 173 ~~Vin~S~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~-------~~~~~~~~~----------~~i~Vga~~ 235 (457)
++|||||||.... ......+..+++++.++|++||+||||+|.. ...+++..+ ++|+||+.+
T Consensus 144 ~~Vin~S~G~~~~-~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~ 222 (347)
T 2iy9_A 144 EKIINISGGQKGV-ASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALA 222 (347)
T ss_dssp EEEEEESSCBCCC--CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEEC
T ss_pred ceEEEeccccCCC-CCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEcc
Confidence 9999999997632 3456788888999999999999999999974 457788888 999999875
Q ss_pred c--CceeeeeEEeCCCceeeceecccccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCc
Q 044513 236 I--DRKFSTKVQLGNNNIYEGISINTYDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSG 313 (457)
Q Consensus 236 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~ 313 (457)
. +....
T Consensus 223 ~~~~g~~~------------------------------------------------------------------------ 230 (347)
T 2iy9_A 223 QYRKGETP------------------------------------------------------------------------ 230 (347)
T ss_dssp CCCTTSCC------------------------------------------------------------------------
T ss_pred cCCCCcee------------------------------------------------------------------------
Confidence 4 20000
Q ss_pred cccccCCceEEEEecCCCCCCCCCCCcceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCC
Q 044513 314 EGPFSAGAVGALMQGQRRRDRAFSFPLPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPIT 393 (457)
Q Consensus 314 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~ 393 (457)
.....++.||++||+
T Consensus 231 --------------------------------------------------------------~~~~~~~~fS~~G~~--- 245 (347)
T 2iy9_A 231 --------------------------------------------------------------VLHGGGITGSRFGNN--- 245 (347)
T ss_dssp --------------------------------------------------------------CBCCCSSSCBCBCTT---
T ss_pred --------------------------------------------------------------cccCCCCCCCCCCCC---
Confidence 001235799999995
Q ss_pred CCCCCCceeecCccEEeeecCCCCCccCCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 394 PDILKPDISAPGIDILAAWSPVNPVSEVKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 394 ~~~~KPdi~APG~~i~s~~~~~~~~~~~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
||||+|||++|+++.+. +.|..++|||||||+|||++|||+|++|+|+++|||++|++|
T Consensus 246 ----~~di~APG~~i~s~~~~-~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~t 304 (347)
T 2iy9_A 246 ----WVDIAAPGQNITFLRPD-AKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLES 304 (347)
T ss_dssp ----TCSEEEECSSEEEECTT-SCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHH
T ss_pred ----CCEEEeCCCCeEeecCC-CCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 56999999999999986 457778999999999999999999999999999999999865
No 22
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=8e-48 Score=379.44 Aligned_cols=268 Identities=27% Similarity=0.305 Sum_probs=201.5
Q ss_pred cCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCcccccc----ceeEEEeccCC-CCCCC
Q 044513 24 MGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNN----KIVGARYYKSD-GEFGP 98 (457)
Q Consensus 24 ~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~-~~~~~ 98 (457)
++++ .+|+.+++|+||+|+||||||| +||+|.+.... .|+...........+. .......+... ....+
T Consensus 19 i~~~-~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (340)
T 3lpc_A 19 VKAD-KVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLP----GYDFISNSQISLDGDGRDADPFDEGDWFDNWACGGRP 92 (340)
T ss_dssp CCHH-HHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCC----CEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTTSCTT
T ss_pred CCHH-HHHHhcCCCCCeEEEEEcCCCC-CChhhhccccc----CccccCCccccccCCCccCCccccccccccccccCCC
Confidence 6666 8999999999999999999998 99999764321 1211110000000000 00000000000 00111
Q ss_pred CCCCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCCCCHHHHHHHHHHHHH--------
Q 044513 99 DDLPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDGCDDADILAAFDDAIA-------- 170 (457)
Q Consensus 99 ~~~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~i~~ai~~a~~-------- 170 (457)
.......|..+|||||||||+|...+... + .||||+|+|+.+|+++..+...++++++|+|+++
T Consensus 93 ~~~~~~~d~~gHGT~vAgiia~~~~~~~g---~-----~GvAp~a~l~~~~v~~~~~~~~~~~~~ai~~a~~~~~~~~~~ 164 (340)
T 3lpc_A 93 DPRKERSDSSWHGSHVAGTIAAVTNNRIG---V-----AGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIAGIPE 164 (340)
T ss_dssp CGGGSCBCCCCHHHHHHHHHHCCCSSSSS---C-----CCTTTTSEEEEEECCBTTBCCHHHHHHHHHHHHTCCCTTSCC
T ss_pred CcccCCCCCCCCHHHHHHHHHccCCCCCc---c-----eeecCCCEEEEEEEecCCCCcHHHHHHHHHHHhccccccccc
Confidence 22224567889999999999998765432 2 8999999999999998877888999999999998
Q ss_pred --CCCcEEEecCCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCCC-ccCCCCCCceEEEeeecCceeeeeEEeC
Q 044513 171 --DGVDIISLSLGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSRS-TITNVAPWFISVAASTIDRKFSTKVQLG 247 (457)
Q Consensus 171 --~~~~Vin~S~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~-~~~~~~~~~i~Vga~~~~~~~~~~~~~~ 247 (457)
.+++|||||||... .....+..+++++.++|++||+||||+|.... .+++..+++|+||+.+.+
T Consensus 165 ~~~~~~Vin~S~G~~~---~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---------- 231 (340)
T 3lpc_A 165 NRNPAKVINMSLGSDG---QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTSR---------- 231 (340)
T ss_dssp CSSCCSEEEECCCEES---CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECTT----------
T ss_pred ccCCCeEEEeCcCCCC---CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCCC----------
Confidence 78999999999752 23456778888899999999999999997653 568889999999986433
Q ss_pred CCceeeceecccccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEe
Q 044513 248 NNNIYEGISINTYDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQ 327 (457)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~ 327 (457)
T Consensus 232 -------------------------------------------------------------------------------- 231 (340)
T 3lpc_A 232 -------------------------------------------------------------------------------- 231 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCCCCcceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCcc
Q 044513 328 GQRRRDRAFSFPLPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGID 407 (457)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~ 407 (457)
+.++.||++||. |||+|||.+
T Consensus 232 ---------------------------------------------------~~~~~~S~~g~~--------~di~ApG~~ 252 (340)
T 3lpc_A 232 ---------------------------------------------------GIRASFSNYGVD--------VDLAAPGQD 252 (340)
T ss_dssp ---------------------------------------------------SSBCTTCCBSTT--------CCEEEECSS
T ss_pred ---------------------------------------------------CCcCCCCCCCCC--------ceEEecCCC
Confidence 246889999985 499999999
Q ss_pred EEeeecCCC------CCccCCcchhhHHHHHHHHHHHHHh-C---CCCCHHHHHHHHhcC
Q 044513 408 ILAAWSPVN------PVSEVKGTSMACPHVTGAAAYIKSF-H---PTWSPAAIKSALMTT 457 (457)
Q Consensus 408 i~s~~~~~~------~~~~~sGTSmAaP~VAG~aALl~~~-~---P~lt~~~i~~~L~~T 457 (457)
|.++.+.+. .|..++|||||||+|||++|||+|+ + |.|+++|||++|++|
T Consensus 253 i~s~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~t 312 (340)
T 3lpc_A 253 ILSTVDSGTRRPVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVST 312 (340)
T ss_dssp EEEEEESCSSSCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHT
T ss_pred eecccCCCCcCCCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhc
Confidence 999987643 3667799999999999999999998 5 999999999999876
No 23
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=3.7e-48 Score=376.37 Aligned_cols=249 Identities=24% Similarity=0.304 Sum_probs=201.3
Q ss_pred cccCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCCC
Q 044513 22 DFMGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDL 101 (457)
Q Consensus 22 ~~~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 101 (457)
+..|++ ++|+....++||+|||||||||++||+|.+.. +....++.... .
T Consensus 6 ~i~G~~-~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~~-----------------------~~~~~~~~~~~------~ 55 (306)
T 4h6w_A 6 NIPGLK-KLWSETRGDPKICVAVLDGIVDQNHPCFIGAD-----------------------LTRLPSLVSGE------A 55 (306)
T ss_dssp -CTTHH-HHHHHCSCCTTCEEEEESSCCCTTSGGGTTCE-----------------------EEECC-------------
T ss_pred CCcCHH-HHHhhhCCCCCCEEEEEcCCCCCCChhHcCCc-----------------------ccCCCcccCCC------C
Confidence 345777 89999988899999999999999999997532 22222222211 1
Q ss_pred CCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC--CCHHHHHHHHHHHHHCCCcEEEec
Q 044513 102 PSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG--CDDADILAAFDDAIADGVDIISLS 179 (457)
Q Consensus 102 ~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~--~~~~~i~~ai~~a~~~~~~Vin~S 179 (457)
....|..+|||||||||+|+.++ + +.||||+|+|+.+|++.+.. .....++++|+||++.+++|||+|
T Consensus 56 ~~~~d~~gHGThVAGiiag~~~~-----~-----~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~s 125 (306)
T 4h6w_A 56 NANGSMSTHGTHVASIIFGQHDS-----P-----VTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINVS 125 (306)
T ss_dssp ---CCCCHHHHHHHHHHHCCTTS-----S-----SCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCCCCCCCchHHHHHHHHccccC-----C-----cceeccccccceeeccccccccchHHHHHHHHHHhhcccceeeecc
Confidence 23346789999999999997532 2 38999999999999986543 477889999999999999999999
Q ss_pred CCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCCCccCCCCCCceEEEeeecCceeeeeEEeCCCceeeceeccc
Q 044513 180 LGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSRSTITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEGISINT 259 (457)
Q Consensus 180 ~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (457)
||...........+.++++++.++|+++|+|+||+|.....+|+..+++|+||+.+..
T Consensus 126 ~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~---------------------- 183 (306)
T 4h6w_A 126 AGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ---------------------- 183 (306)
T ss_dssp CCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT----------------------
T ss_pred ccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC----------------------
Confidence 9976444555677888899999999999999999999888899999999999986433
Q ss_pred ccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCCCCCCC
Q 044513 260 YDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDRAFSFP 339 (457)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 339 (457)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecCCCCCc
Q 044513 340 LPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSPVNPVS 419 (457)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~ 419 (457)
+.+++||++|+.. .||||+|||.+|+++.+. +.|.
T Consensus 184 ---------------------------------------~~~~~~s~~g~~~-----~~~di~APG~~i~s~~~~-~~~~ 218 (306)
T 4h6w_A 184 ---------------------------------------GKPVDFSNWGDAY-----QKQGILAPGKDILGAKPN-GGTI 218 (306)
T ss_dssp ---------------------------------------SCBCSSSCBCHHH-----HHHEEEEECSSEEEECTT-SCEE
T ss_pred ---------------------------------------CCccccccccCCc-----CcceeecCCcCcccccCC-Ccee
Confidence 2457788888653 578999999999999877 4677
Q ss_pred cCCcchhhHHHHHHHHHHHHHh----CCCCCHHHHHHHHhcC
Q 044513 420 EVKGTSMACPHVTGAAAYIKSF----HPTWSPAAIKSALMTT 457 (457)
Q Consensus 420 ~~sGTSmAaP~VAG~aALl~~~----~P~lt~~~i~~~L~~T 457 (457)
.++|||||||+|||++|||+++ +|.|+++|||++|++|
T Consensus 219 ~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~t 260 (306)
T 4h6w_A 219 RLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLAS 260 (306)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHT
T ss_pred ccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhh
Confidence 7899999999999999999864 6999999999999876
No 24
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=9.3e-48 Score=375.12 Aligned_cols=244 Identities=27% Similarity=0.377 Sum_probs=201.5
Q ss_pred ccccCCchhcccCCCCCC--CeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCC
Q 044513 21 WDFMGFSQQVERSTTEES--DIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGP 98 (457)
Q Consensus 21 ~~~~~~~~~~~~~g~~G~--gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 98 (457)
.+.++++ .+|+.+ +|+ ||+|+|||||||++||+|.+ ++..+.+|..+....
T Consensus 12 l~~i~~~-~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~------------------------~~~~~~~~~~~~~~~- 64 (320)
T 2z30_A 12 IERVKAP-SVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAA------------------------NIAWCVSTLRGKVST- 64 (320)
T ss_dssp HHHTTCG-GGTTTC-CSCCTTCEEEEEESCBCTTCTTTGG------------------------GEEEEEECGGGCCBC-
T ss_pred hhhcChH-HHHHhc-CCCcCCeEEEEECCCCCCCChhHhc------------------------ccccCccccCCccCC-
Confidence 3567777 899998 999 99999999999999999964 344555555432100
Q ss_pred CCCCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC-CCHHHHHHHHHHHHHC------
Q 044513 99 DDLPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG-CDDADILAAFDDAIAD------ 171 (457)
Q Consensus 99 ~~~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~~i~~ai~~a~~~------ 171 (457)
......|..+|||||||||+|.. ++ .|+ .||||+|+|+.+|+++..+ ...++++++|+||++.
T Consensus 65 -~~~~~~d~~gHGT~vAgiia~~~-n~---~g~-----~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~~~~ 134 (320)
T 2z30_A 65 -KLRDCADQNGHGTHVIGTIAALN-ND---IGV-----VGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVAD 134 (320)
T ss_dssp -CHHHHBCSSSHHHHHHHHHHCCS-SS---BSC-----CCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSC
T ss_pred -CCCCCCCCCCCHHHHHHHHHccc-CC---Cce-----EeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHhCcccccc
Confidence 00123568899999999999973 22 223 8999999999999998765 4778899999999987
Q ss_pred --------------CCcEEEecCCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCCCccCCCCCCceEEEeeecC
Q 044513 172 --------------GVDIISLSLGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSRSTITNVAPWFISVAASTID 237 (457)
Q Consensus 172 --------------~~~Vin~S~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~~~~~~~i~Vga~~~~ 237 (457)
+++|||||||.... ...+..+++++.++|++||+||||+|.....+++..+++|+||+.+.+
T Consensus 135 ~~~~~~~~~~~~~~~~~Vin~S~G~~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~ 210 (320)
T 2z30_A 135 KDGDGIIAGDPDDDAAEVISMSLGGPAD----DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN 210 (320)
T ss_dssp TTSSSCCTTCTTSCCCSEEEECEEBSCC----CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT
T ss_pred cccccccccccccCCceEEEecCCCCCC----CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEeeCCC
Confidence 89999999998732 467788888899999999999999998888899999999999986433
Q ss_pred ceeeeeEEeCCCceeeceecccccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccc
Q 044513 238 RKFSTKVQLGNNNIYEGISINTYDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPF 317 (457)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~ 317 (457)
T Consensus 211 -------------------------------------------------------------------------------- 210 (320)
T 2z30_A 211 -------------------------------------------------------------------------------- 210 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCceEEEEecCCCCCCCCCCCcceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCC
Q 044513 318 SAGAVGALMQGQRRRDRAFSFPLPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDIL 397 (457)
Q Consensus 318 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~ 397 (457)
+.++.||++||
T Consensus 211 -------------------------------------------------------------~~~~~~S~~g~-------- 221 (320)
T 2z30_A 211 -------------------------------------------------------------DNIASFSNRQP-------- 221 (320)
T ss_dssp -------------------------------------------------------------SCBCTTSCSSC--------
T ss_pred -------------------------------------------------------------CCcCcccCCCC--------
Confidence 24688999886
Q ss_pred CCceeecCccEEeeecCCCCCccCCcchhhHHHHHHHHHHHHHhC-------------CCCCHHHHHHHHhcC
Q 044513 398 KPDISAPGIDILAAWSPVNPVSEVKGTSMACPHVTGAAAYIKSFH-------------PTWSPAAIKSALMTT 457 (457)
Q Consensus 398 KPdi~APG~~i~s~~~~~~~~~~~sGTSmAaP~VAG~aALl~~~~-------------P~lt~~~i~~~L~~T 457 (457)
+|+|||.+|+++++. +.|..++|||||||+|||++|||+|++ |.|++.|||++|++|
T Consensus 222 --~v~APG~~i~s~~~~-~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~t 291 (320)
T 2z30_A 222 --EVSAPGVDILSTYPD-DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHIT 291 (320)
T ss_dssp --SEEEECSSEEEEETT-TEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHHH
T ss_pred --CEEeCCCCeEEeccC-CCeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHHhh
Confidence 789999999999876 456778999999999999999999999 999999999999865
No 25
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=1.3e-47 Score=366.24 Aligned_cols=220 Identities=29% Similarity=0.402 Sum_probs=190.0
Q ss_pred CCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCCCCCCCCCCCCcch
Q 044513 34 TTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDLPSPRDTDGHGSH 113 (457)
Q Consensus 34 g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~gHGTh 113 (457)
..+|+||+|+|||+|||++||+|.+ ++..+++|.. ...|..+||||
T Consensus 27 ~~~G~gv~VaViDsGvd~~H~~l~~------------------------~~~~~~~~~~----------~~~d~~gHGT~ 72 (279)
T 2pwa_A 27 ESAGQGSCVYVIDTGIEASHPEFEG------------------------RAQMVKTYYY----------SSRDGNGHGTH 72 (279)
T ss_dssp TTTTTTEEEEEEESCCCTTCGGGTT------------------------CEEEEEESSS----------CSSCSSSHHHH
T ss_pred CCCCCCCEEEEEeCCCCCCChhHhC------------------------ccccccCCCC----------CCCCCCCCHHH
Confidence 4899999999999999999999965 3344556651 24568999999
Q ss_pred hhhhcccccCccccccccCCcccccccccccEEEeeeecCCC-CCHHHHHHHHHHHHHCCC-------cEEEecCCCCCC
Q 044513 114 TASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG-CDDADILAAFDDAIADGV-------DIISLSLGSSNP 185 (457)
Q Consensus 114 VAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~~i~~ai~~a~~~~~-------~Vin~S~G~~~~ 185 (457)
|||||+|+. .||||+|+|+.+|++++.+ ...++++++|+|+++.++ +|||||||..
T Consensus 73 vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vin~S~G~~-- 136 (279)
T 2pwa_A 73 CAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGG-- 136 (279)
T ss_dssp HHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE--
T ss_pred HHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCCccEEEecCCCC--
Confidence 999999873 7899999999999998765 588899999999999877 9999999975
Q ss_pred CCCccchHHHHHHHhhhCCcEEEEecCCCCCCCC-ccCCCCCCceEEEeeecCceeeeeEEeCCCceeeceecccccCCC
Q 044513 186 HEYFNDSIAIGTFHAMRNGILTSASAGNDGPSRS-TITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEGISINTYDLQN 264 (457)
Q Consensus 186 ~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~-~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (457)
....+.++++++.++|++||+||||+|.... .+|+..+++|+||+.+.+
T Consensus 137 ---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--------------------------- 186 (279)
T 2pwa_A 137 ---YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY--------------------------- 186 (279)
T ss_dssp ---CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT---------------------------
T ss_pred ---CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC---------------------------
Confidence 2467888888999999999999999997653 468889999999986533
Q ss_pred ceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCCCCCCCcceEe
Q 044513 265 VTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDRAFSFPLPTSY 344 (457)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 344 (457)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecCCCCCccCCcc
Q 044513 345 VDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSPVNPVSEVKGT 424 (457)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~~sGT 424 (457)
+.++.||++||.. ||+|||.+|+++.+.+ .|..++||
T Consensus 187 ----------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~~-~~~~~sGT 223 (279)
T 2pwa_A 187 ----------------------------------DRRSSFSNYGSVL--------DIFGPGTDILSTWIGG-STRSISGT 223 (279)
T ss_dssp ----------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEEETTT-EEEEECSH
T ss_pred ----------------------------------CCcCCcCCCCCcc--------eEEEecCCeEEeecCC-CEEEcCCh
Confidence 2468899999976 9999999999999774 56778999
Q ss_pred hhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 425 SMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 425 SmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
|||||+|||++|||+|+ |+|+++|||++|++|
T Consensus 224 S~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~t 255 (279)
T 2pwa_A 224 SMATPHVAGLAAYLMTL-GKTTAASACRYIADT 255 (279)
T ss_dssp HHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHh
Confidence 99999999999999999 999999999999875
No 26
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=5.5e-47 Score=362.86 Aligned_cols=224 Identities=26% Similarity=0.404 Sum_probs=190.9
Q ss_pred hcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCCCCCCCCCC
Q 044513 29 QVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDLPSPRDTD 108 (457)
Q Consensus 29 ~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~ 108 (457)
..|... +|+||+|+|||+|||++||+|.+ ++....+|..+ ..|..
T Consensus 24 ~~~~~~-~G~gv~VaViDtGvd~~h~~l~~------------------------~~~~~~~~~~~----------~~d~~ 68 (279)
T 3f7m_A 24 YAYDTS-AGAGACVYVIDTGVEDTHPDFEG------------------------RAKQIKSYAST----------ARDGH 68 (279)
T ss_dssp EEECTT-TTTTEEEEEEESCCCTTCGGGTT------------------------CEEEEEECSSS----------SSCSS
T ss_pred eeecCC-CCCCCEEEEEcCCCCCCChhhcc------------------------ccccccCCCCC----------CCCCC
Confidence 355555 99999999999999999999965 34455566543 22788
Q ss_pred CCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC-CCHHHHHHHHHHHHHCC-------CcEEEecC
Q 044513 109 GHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG-CDDADILAAFDDAIADG-------VDIISLSL 180 (457)
Q Consensus 109 gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~~i~~ai~~a~~~~-------~~Vin~S~ 180 (457)
+|||||||||+|+. .||||+|+|+.+|+++..+ ...++++++++|+++.+ ++||||||
T Consensus 69 gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vin~S~ 134 (279)
T 3f7m_A 69 GHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVASMSL 134 (279)
T ss_dssp SHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECC
T ss_pred CcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCeEEEeCC
Confidence 99999999999873 7899999999999998765 58889999999999876 89999999
Q ss_pred CCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCCCc-cCCCCCCceEEEeeecCceeeeeEEeCCCceeeceeccc
Q 044513 181 GSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSRST-ITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEGISINT 259 (457)
Q Consensus 181 G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~-~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (457)
|.. ....+.++++++.++|++||+||||+|..... +++..+++|+||+.+.+
T Consensus 135 g~~-----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---------------------- 187 (279)
T 3f7m_A 135 GGG-----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDSN---------------------- 187 (279)
T ss_dssp CEE-----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT----------------------
T ss_pred CcC-----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCCC----------------------
Confidence 965 34678888899999999999999999976543 47888999999986433
Q ss_pred ccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCCCCCCC
Q 044513 260 YDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDRAFSFP 339 (457)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 339 (457)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 3f7m_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecCCCCCc
Q 044513 340 LPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSPVNPVS 419 (457)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~ 419 (457)
+.++.||++||.. ||+|||.+|.++.+.+ .|.
T Consensus 188 ---------------------------------------~~~~~~S~~g~~~--------di~ApG~~i~s~~~~~-~~~ 219 (279)
T 3f7m_A 188 ---------------------------------------DVRSTFSNYGRVV--------DIFAPGTSITSTWIGG-RTN 219 (279)
T ss_dssp ---------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECGGG-CEE
T ss_pred ---------------------------------------CCCCCCCCCCCCC--------eEEECCCCeEeecCCC-CEE
Confidence 3568899999976 9999999999998764 567
Q ss_pred cCCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 420 EVKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 420 ~~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
.++|||||||+|||++|||+|++|. +++|||++|++|
T Consensus 220 ~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~t 256 (279)
T 3f7m_A 220 TISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTL 256 (279)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHH
T ss_pred EeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHh
Confidence 7799999999999999999999999 999999999865
No 27
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=1.9e-46 Score=381.40 Aligned_cols=172 Identities=25% Similarity=0.367 Sum_probs=136.1
Q ss_pred ccccCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCC
Q 044513 21 WDFMGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDD 100 (457)
Q Consensus 21 ~~~~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 100 (457)
.+.++++ .+|..+ |+||+|+|||||||++||+|.+. +..+.++.... .
T Consensus 8 l~~i~~~-~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~------------------------~~~~~~~~~~~-----~ 55 (441)
T 1y9z_A 8 QTFVGAT-VLSDSQ--AGNRTICIIDSGYDRSHNDLNAN------------------------NVTGTNNSGTG-----N 55 (441)
T ss_dssp HHHTTCS-SSCCTT--GGGCEEEEEESCCCTTSTTTTTS------------------------EEEECCCTTSC-----C
T ss_pred hhhcChh-hhhhcC--CCCcEEEEEcCCCCCCChhHhcC------------------------cccCcccCCCC-----C
Confidence 3456776 778764 78999999999999999999652 12222222111 1
Q ss_pred CCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccc--cEEEeeeecCCC-CCHHHHHHHHHHHHHC-CCcEE
Q 044513 101 LPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSA--RIAVYKICWSDG-CDDADILAAFDDAIAD-GVDII 176 (457)
Q Consensus 101 ~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A--~l~~~kv~~~~~-~~~~~i~~ai~~a~~~-~~~Vi 176 (457)
...+.|..+|||||||||++..++ .|+ .||||+| +|+.+|+++..+ ...++++++|+||+++ +++||
T Consensus 56 ~~~~~d~~gHGT~vAgiia~~~~~----~g~-----~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~g~~Vi 126 (441)
T 1y9z_A 56 WYQPGNNNAHGTHVAGTIAAIANN----EGV-----VGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVV 126 (441)
T ss_dssp TTCCCSSCCHHHHHHHHHHCCCSS----SBC-----CCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSEE
T ss_pred CCCCCCCCCcHHHHHHHHhcccCC----CCc-----eEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHhcCCcEE
Confidence 124567899999999999998632 233 8999995 899999998765 5777899999999999 99999
Q ss_pred EecCCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCCCccCCCCCCceEEEeeecC
Q 044513 177 SLSLGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSRSTITNVAPWFISVAASTID 237 (457)
Q Consensus 177 n~S~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~~~~~~~i~Vga~~~~ 237 (457)
|||||.... ...+.+++.++.++|++||+||||+|.....+++..+++|+||+.+.+
T Consensus 127 n~S~G~~~~----~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~ 183 (441)
T 1y9z_A 127 TMSLGGSGS----TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSN 183 (441)
T ss_dssp EECCCBSCC----BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTT
T ss_pred EeCCCCCCC----CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCC
Confidence 999998732 346777888899999999999999998888899999999999997544
No 28
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=1.5e-48 Score=406.52 Aligned_cols=268 Identities=19% Similarity=0.212 Sum_probs=13.3
Q ss_pred CCCeEEEecCCcccccccCcccccCCch-----hcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccC
Q 044513 1 MGGVVSVFPNRKRKLHTTRSWDFMGFSQ-----QVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVS 75 (457)
Q Consensus 1 ~~~V~~v~~~~~~~~~~~~s~~~~~~~~-----~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~ 75 (457)
+|+|++|+|++.+.++ ..+|.+..+.. ..|..+.+|+||+|+|||||||++||+|.+... |.
T Consensus 137 ~P~V~~Vepd~~v~~~-~~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~------ 203 (692)
T 2p4e_P 137 LPHVDYIEEDSSVFAQ-SIPWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VT------ 203 (692)
T ss_dssp STTEEEEEEEEEEEEC----------------------------------------------------------------
T ss_pred CCCceEEEeccccccC-CCCcchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ec------
Confidence 5899999999987653 23454433332 367789999999999999999999999976431 10
Q ss_pred CccccccceeEEEeccCCCCCCCCCCCCCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC
Q 044513 76 ANFTCNNKIVGARYYKSDGEFGPDDLPSPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG 155 (457)
Q Consensus 76 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~ 155 (457)
.+++..+..... ....+.|..||||||||||+|+. .||||+|+|+.+|++++.+
T Consensus 204 -----------~~~~~~d~dg~~-~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G 257 (692)
T 2p4e_P 204 -----------DFENVPEEDGTR-FHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQG 257 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------ccccccCCCCCc-ccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCCC
Confidence 000000000000 00245678999999999999874 7899999999999998765
Q ss_pred -CCHHHHHHHHHHHHHC------CCcEEEecCCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCCC-ccCCCCCC
Q 044513 156 -CDDADILAAFDDAIAD------GVDIISLSLGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSRS-TITNVAPW 227 (457)
Q Consensus 156 -~~~~~i~~ai~~a~~~------~~~Vin~S~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~-~~~~~~~~ 227 (457)
...++++++|+|+++. +++|||||||... ...+..+++++.++|++||+||||+|.... .+|+..++
T Consensus 258 ~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~-----s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~ 332 (692)
T 2p4e_P 258 KGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY-----SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPE 332 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCCC-----cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCC
Confidence 4778899999999875 8899999999752 356677778888999999999999997654 44788899
Q ss_pred ceEEEeeecCceeeeeEEeCCCceeeceecccccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEE
Q 044513 228 FISVAASTIDRKFSTKVQLGNNNIYEGISINTYDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVC 307 (457)
Q Consensus 228 ~i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ 307 (457)
+|+||+++.+...
T Consensus 333 vItVGA~d~~~~~------------------------------------------------------------------- 345 (692)
T 2p4e_P 333 VITVGATNAQDQP------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEcCCCCc-------------------------------------------------------------------
Confidence 9999986544100
Q ss_pred ecCCCccccccCCceEEEEecCCCCCCCCCCCcceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCC
Q 044513 308 DDLVSGEGPFSAGAVGALMQGQRRRDRAFSFPLPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSR 387 (457)
Q Consensus 308 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~ 387 (457)
...-+.||++
T Consensus 346 ----------------------------------------------------------------------a~~ss~fSn~ 355 (692)
T 2p4e_P 346 ----------------------------------------------------------------------VTLGTLGTNF 355 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------------------------------cccccccCCC
Confidence 0001238899
Q ss_pred CCCCCCCCCCCCceeecCccEEeeecCC-CCCccCCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 388 GPNPITPDILKPDISAPGIDILAAWSPV-NPVSEVKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 388 Gp~~~~~~~~KPdi~APG~~i~s~~~~~-~~~~~~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
||. |||+|||.+|+++++.. +.|..++|||||||||||++|||+|++|+|+++|||++|++|
T Consensus 356 G~~--------vDI~APG~~I~St~~~~~~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~t 418 (692)
T 2p4e_P 356 GRC--------VDLFAPGEDIIGASSDCSTCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHF 418 (692)
T ss_dssp -----------------------------------------------------------------------
T ss_pred CCc--------eeEEecCCcEEeeccCCCCceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHh
Confidence 985 49999999999999764 567788999999999999999999999999999999999875
No 29
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=6.5e-46 Score=377.13 Aligned_cols=241 Identities=21% Similarity=0.233 Sum_probs=184.9
Q ss_pred hcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCCCCCCCCCC
Q 044513 29 QVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDLPSPRDTD 108 (457)
Q Consensus 29 ~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~ 108 (457)
..|..+++|+||+|+|||||||++||+|.+.. .....++..+...... .....|..
T Consensus 17 ~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~-----------------------~~~~~~~v~~~dg~~f-~~~~~D~~ 72 (546)
T 2qtw_B 17 DEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV-----------------------MVTDFENVPEEDGTRF-HRQASKCD 72 (546)
T ss_dssp -------CCTTSEEEEEESCCCTTSTTTTTTE-----------------------EEEEEECCCCCC--------CTTTT
T ss_pred hhcccCCCCCCcEEEEECCCCCCCChHHcccc-----------------------cccCcccccCCCCccc-cCCCCCCC
Confidence 37888999999999999999999999997532 1111111111000000 02345789
Q ss_pred CCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC-CCHHHHHHHHHHHHHC------CCcEEEecCC
Q 044513 109 GHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG-CDDADILAAFDDAIAD------GVDIISLSLG 181 (457)
Q Consensus 109 gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~~i~~ai~~a~~~------~~~Vin~S~G 181 (457)
+|||||||||+|+. .||||+|+|+.+|++++.+ ...++++++|+|+++. +++|||||||
T Consensus 73 GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~VINmSlG 138 (546)
T 2qtw_B 73 SHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLA 138 (546)
T ss_dssp HHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEEEEECEE
T ss_pred ChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeEEEecCC
Confidence 99999999999874 6889999999999998766 4788999999999874 8999999999
Q ss_pred CCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCC-CccCCCCCCceEEEeeecCceeeeeEEeCCCceeeceecccc
Q 044513 182 SSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSR-STITNVAPWFISVAASTIDRKFSTKVQLGNNNIYEGISINTY 260 (457)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~-~~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (457)
.. ....+..+++++.++|++||+||||+|... ..+|+..+++|+||+.+.+....
T Consensus 139 g~-----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~a------------------- 194 (546)
T 2qtw_B 139 GG-----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQPV------------------- 194 (546)
T ss_dssp EE-----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCBC-------------------
T ss_pred CC-----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCcc-------------------
Confidence 65 246788888899999999999999999764 34578899999999976441000
Q ss_pred cCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCCCCCCCc
Q 044513 261 DLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDRAFSFPL 340 (457)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 340 (457)
T Consensus 195 -------------------------------------------------------------------------------- 194 (546)
T 2qtw_B 195 -------------------------------------------------------------------------------- 194 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecCC-CCCc
Q 044513 341 PTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSPV-NPVS 419 (457)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~~-~~~~ 419 (457)
..-..||++|+.. ||+|||.+|+++++.. ..|.
T Consensus 195 --------------------------------------~~s~~fSn~G~~v--------DI~APG~~I~St~~~~~~~y~ 228 (546)
T 2qtw_B 195 --------------------------------------TLGTLGTNFGRCV--------DLFAPGEDIIGASSDCSTCFV 228 (546)
T ss_dssp --------------------------------------EETTEECCBSTTC--------CEEEECSSEEEECTTSTTCEE
T ss_pred --------------------------------------cccCCcCCCCCcc--------eEEecCccEEeeccCCCCcEe
Confidence 0002378899854 9999999999999865 4677
Q ss_pred cCCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 420 EVKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 420 ~~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
.++|||||||+|||++|||+|++|+|+++|||++|++|
T Consensus 229 ~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~t 266 (546)
T 2qtw_B 229 SQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHF 266 (546)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHT
T ss_pred eeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHh
Confidence 78999999999999999999999999999999999875
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=3.3e-45 Score=375.09 Aligned_cols=257 Identities=15% Similarity=0.085 Sum_probs=195.7
Q ss_pred ccCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCCCC
Q 044513 23 FMGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDLP 102 (457)
Q Consensus 23 ~~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 102 (457)
.++++ .+|+.+++|+||+|||||+|||++||+|.+.... ..+++|.++. ..+.+..
T Consensus 24 ~i~~~-~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~~----------------------~~~~d~~~~~-~~p~~~~ 79 (471)
T 1p8j_A 24 DLNVK-EAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDP----------------------GASFDVNDQD-PDPQPRY 79 (471)
T ss_dssp SCCCH-HHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBCG----------------------GGCEETTTTB-SCCCCCC
T ss_pred CCChH-HHHhcCCCCCCCEEEEEeCCcCCCChhHhhccCc----------------------cCcccccCCC-CCCCCcc
Confidence 36777 8999999999999999999999999999753210 1123444331 1122222
Q ss_pred CCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCCCCHHHHHHHHHHHHH-CCCcEEEecCC
Q 044513 103 SPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDGCDDADILAAFDDAIA-DGVDIISLSLG 181 (457)
Q Consensus 103 ~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~i~~ai~~a~~-~~~~Vin~S~G 181 (457)
...|..+|||||||||+|...++.. . .||||+|+|+.+|+++ ...+++++|++++++ .+++|||||||
T Consensus 80 ~~~d~~gHGT~vAGiiaa~~~n~~g---~-----~GvAp~a~i~~~rv~~---g~~~~~~~ai~~a~~~~~~~Vin~S~G 148 (471)
T 1p8j_A 80 TQMNDNRHGTRCAGEVAAVANNGVC---G-----VGVAYNARIGGVRMLD---GEVTDAVEARSLGLNPNHIHIYSASWG 148 (471)
T ss_dssp CTTCTTCHHHHHHHHHHCCSSSSSS---C-----CCTTTTSEEEEEECSS---SCCCHHHHHHHHTSCTTTCCEEEECCB
T ss_pred CCCCCCCcHHHHHHHHHeeccCCCC---C-----EEECCCCeEEEEEccC---CchhHHHHHHHhhhccCCCeEEEeccC
Confidence 4567899999999999998655432 2 8999999999999986 335679999999998 89999999999
Q ss_pred CCCCCCC---ccchHHHHHHHhh-----hCCcEEEEecCCCCCCCC----ccCCCCCCceEEEeeecCceeeeeEEeCCC
Q 044513 182 SSNPHEY---FNDSIAIGTFHAM-----RNGILTSASAGNDGPSRS----TITNVAPWFISVAASTIDRKFSTKVQLGNN 249 (457)
Q Consensus 182 ~~~~~~~---~~~~~~~~~~~a~-----~~gi~vV~AAGN~g~~~~----~~~~~~~~~i~Vga~~~~~~~~~~~~~~~~ 249 (457)
....... ....+.+++.++. .+|++||+||||+|.... .....++++|+||+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~------------ 216 (471)
T 1p8j_A 149 PEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQF------------ 216 (471)
T ss_dssp SCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTT------------
T ss_pred cCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCC------------
Confidence 8632211 1233445555544 379999999999986532 122345789999986533
Q ss_pred ceeeceecccccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecC
Q 044513 250 NIYEGISINTYDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQ 329 (457)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~ 329 (457)
T Consensus 217 -------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 217 -------------------------------------------------------------------------------- 216 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCcceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEE
Q 044513 330 RRRDRAFSFPLPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDIL 409 (457)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~ 409 (457)
+.++.||++||.. ....+|...+||..|+
T Consensus 217 -------------------------------------------------g~~a~~S~~g~~~--~~~~~~~~~~~g~~i~ 245 (471)
T 1p8j_A 217 -------------------------------------------------GNVPWYSEACSST--LATTYSSGNQNEKQIV 245 (471)
T ss_dssp -------------------------------------------------SCCCTTCCBCTTC--CEEEECCCSTTSCCEE
T ss_pred -------------------------------------------------CCcccccCCCCcc--eEEeCCCCCCCCCCEE
Confidence 2468899999987 5555666666778999
Q ss_pred eeecCCCCCccCCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 410 AAWSPVNPVSEVKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 410 s~~~~~~~~~~~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
++...+..|..++|||||||+|||++|||+|++|+|+++|||++|++|
T Consensus 246 st~~~~~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~t 293 (471)
T 1p8j_A 246 TTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQT 293 (471)
T ss_dssp EEETTTEEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred EeeCCCCccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhc
Confidence 998776667788999999999999999999999999999999999865
No 31
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=4.4e-44 Score=369.18 Aligned_cols=249 Identities=16% Similarity=0.126 Sum_probs=194.3
Q ss_pred ccCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCCCC
Q 044513 23 FMGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDLP 102 (457)
Q Consensus 23 ~~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 102 (457)
.++++ .+|..+++|+||+|||||+|||++||+|.+.... ..+++|..+.. ...
T Consensus 40 ~i~~~-~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~~~----------------------~~~~d~~~~~~----~~~ 92 (503)
T 2id4_A 40 DINVL-DLWYNNITGAGVVAAIVDDGLDYENEDLKDNFCA----------------------EGSWDFNDNTN----LPK 92 (503)
T ss_dssp SCCCH-HHHHTTCSCTTCEEEEEESCCCTTSTTTTTTBCG----------------------GGCEETTTTBS----CCC
T ss_pred ccChH-HHHhcCCCCCCeEEEEEeCCCCCCChhHhhcccc----------------------cCcccCCCCCC----CCC
Confidence 35566 8999999999999999999999999999764211 11344544321 011
Q ss_pred CCCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCCCCHHHHHHHHHHHHHCCCcEEEecCCC
Q 044513 103 SPRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDGCDDADILAAFDDAIADGVDIISLSLGS 182 (457)
Q Consensus 103 ~~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~ 182 (457)
+..|..+|||||||||+|...++.. . .||||+|+|+.+|+++.. ....+++++|+|+++.+ +|||||||.
T Consensus 93 p~~d~~gHGT~vAGiiaa~~~n~~~---~-----~GvAp~a~i~~~rv~~~~-~~~~~~~~ai~~a~~~~-~Iin~S~G~ 162 (503)
T 2id4_A 93 PRLSDDYHGTRCAGEIAAKKGNNFC---G-----VGVGYNAKISGIRILSGD-ITTEDEAASLIYGLDVN-DIYSCSWGP 162 (503)
T ss_dssp CCSTTTTHHHHHHHHHHCCSSSSSS---C-----CCTTTTSEEEEEECTTSC-CCHHHHHHHTTTTTTTC-SEEEECEES
T ss_pred CCCCCCChHHHHHHHHHhccCCCCC---c-----EEECCCCEEEEEEeeCCC-CChHHHHHHHHhHhhcC-CEEEeCCCc
Confidence 2356889999999999998655432 2 799999999999998754 57788999999999887 999999997
Q ss_pred CCCCCC---ccchHHHHHHHhh-----hCCcEEEEecCCCCCCC--CccC--CCCCCceEEEeeecCceeeeeEEeCCCc
Q 044513 183 SNPHEY---FNDSIAIGTFHAM-----RNGILTSASAGNDGPSR--STIT--NVAPWFISVAASTIDRKFSTKVQLGNNN 250 (457)
Q Consensus 183 ~~~~~~---~~~~~~~~~~~a~-----~~gi~vV~AAGN~g~~~--~~~~--~~~~~~i~Vga~~~~~~~~~~~~~~~~~ 250 (457)
...... ....+.+++.++. .+|++||+||||+|... +.++ ..++++|+||+.+.+
T Consensus 163 ~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~------------- 229 (503)
T 2id4_A 163 ADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHK------------- 229 (503)
T ss_dssp CCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTT-------------
T ss_pred CCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCC-------------
Confidence 632211 2245666666665 37999999999999643 2333 256789999986533
Q ss_pred eeeceecccccCCCceeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCC
Q 044513 251 IYEGISINTYDLQNVTYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQR 330 (457)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~ 330 (457)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCcceEeeccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceee----cCc
Q 044513 331 RRDRAFSFPLPTSYVDTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISA----PGI 406 (457)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~A----PG~ 406 (457)
+.++.||++||.. |++| ||.
T Consensus 230 ------------------------------------------------~~~a~~S~~g~~~--------~~~a~~~gpG~ 253 (503)
T 2id4_A 230 ------------------------------------------------DLHPPYSEGCSAV--------MAVTYSSGSGE 253 (503)
T ss_dssp ------------------------------------------------SCCCTTCCCCTTE--------EEEEECSBTTB
T ss_pred ------------------------------------------------CCcCCcCCCCCcc--------eEeecCCCCCC
Confidence 2468899999987 8887 899
Q ss_pred cEEeeecCCCCCccCCcchhhHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 407 DILAAWSPVNPVSEVKGTSMACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 407 ~i~s~~~~~~~~~~~sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
.|+++......|..++|||||||+|||++|||+|++|+|+++|||++|++|
T Consensus 254 ~I~st~~~~~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~t 304 (503)
T 2id4_A 254 YIHSSDINGRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILS 304 (503)
T ss_dssp CEEEECSTTCEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred ceEeecCCCCceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhc
Confidence 999996556677888999999999999999999999999999999999865
No 32
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=7e-44 Score=375.70 Aligned_cols=156 Identities=17% Similarity=0.202 Sum_probs=108.9
Q ss_pred cCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCCCCC
Q 044513 24 MGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDLPS 103 (457)
Q Consensus 24 ~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 103 (457)
++++ .+|..+++|+||+|||||+|||++||+|.+... .+.++|..+.. + ..
T Consensus 57 in~~-~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~~-----------------------~~~~~~~~~~~----d-~~ 107 (600)
T 2oxa_A 57 LNLW-WAHRTGVLGHGVNVAVVDDGLAIAHPDLADNVR-----------------------PGSKNVVTGSD----D-PT 107 (600)
T ss_dssp CCCH-HHHHTTCSCTTCEEEEESSCCCTTCTTTGGGBC-----------------------SCCBCTTTCSS----C-CC
T ss_pred cChH-HHHhcCCCCCCcEEEEecCCcCCCCcchhhccc-----------------------cCceeccCCCC----C-CC
Confidence 5566 899999999999999999999999999975321 11223333211 1 12
Q ss_pred CCC-CCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCCCCH--HHHHHHHHHHHHCCCcEEEecC
Q 044513 104 PRD-TDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDGCDD--ADILAAFDDAIADGVDIISLSL 180 (457)
Q Consensus 104 ~~d-~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~--~~i~~ai~~a~~~~~~Vin~S~ 180 (457)
+.+ ..+|||||||||+|. .++. |+ .||||+|+|+.+|+++..+... ..++.....+...+++||||||
T Consensus 108 p~d~~~gHGT~vAGiiaa~-~n~~---g~-----~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~Vin~S~ 178 (600)
T 2oxa_A 108 PTDPDTGHGTSVSGIIAAV-DNAI---GT-----KGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNHSY 178 (600)
T ss_dssp CCSTTCCHHHHHHHHHHCC-SSSS---SC-----CCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSEEEECC
T ss_pred CCCCCCCCccHHHHHhhcc-cCCC---cc-----eEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeEEEEec
Confidence 333 789999999999998 4432 22 8999999999999998765432 3333333346778999999999
Q ss_pred CCCCCCCCccchH----HHHHHH---hhhCCcEEEEecCCCCCC
Q 044513 181 GSSNPHEYFNDSI----AIGTFH---AMRNGILTSASAGNDGPS 217 (457)
Q Consensus 181 G~~~~~~~~~~~~----~~~~~~---a~~~gi~vV~AAGN~g~~ 217 (457)
|.........+.+ .+++.+ +.++|++||+||||+|..
T Consensus 179 G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~ 222 (600)
T 2oxa_A 179 RMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNK 222 (600)
T ss_dssp CCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSE
T ss_pred cCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCcc
Confidence 9874333332222 222222 446899999999999864
No 33
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=3.6e-41 Score=356.18 Aligned_cols=156 Identities=16% Similarity=0.145 Sum_probs=109.2
Q ss_pred cCCchhcccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCCCCC
Q 044513 24 MGFSQQVERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDLPS 103 (457)
Q Consensus 24 ~~~~~~~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 103 (457)
|++. .+|++|++|+||+|||||+|||++||||.++.. .+.++|.+.. . +..+
T Consensus 57 inv~-~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~~-----------------------~~~~~~~~~~-~---dp~p 108 (600)
T 3hjr_A 57 LNLW-WAHRTGVLGQGVNVAVVDDGLAIAHPDLADNVR-----------------------PGSKNVVTGS-D---DPTP 108 (600)
T ss_dssp CCCH-HHHHHTCSCTTCEEEEESSCCCTTCTTTGGGBC-----------------------SCCBCTTTSS-S---CCCC
T ss_pred cCHH-HHHHcCCCCCCeEEEEEcCCCCCCChhHhhccc-----------------------cCcceeecCC-C---CCCC
Confidence 4444 799999999999999999999999999975321 1112222221 1 1122
Q ss_pred CCCCCCCcchhhhhcccccCccccccccCCcccccccccccEEEeeeecCCC-CCHHHHHHHH-HHHHHCCCcEEEecCC
Q 044513 104 PRDTDGHGSHTASTAAGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDG-CDDADILAAF-DDAIADGVDIISLSLG 181 (457)
Q Consensus 104 ~~d~~gHGThVAGi~ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~~i~~ai-~~a~~~~~~Vin~S~G 181 (457)
..+..+|||||||||||.. ++ .|+ .||||+|+|+.+|++++.+ ...++++.++ +++...+++|||+|||
T Consensus 109 ~~~~~gHGThVAGiIAa~~-n~---~g~-----~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~G 179 (600)
T 3hjr_A 109 TDPDTAHGTSVSGIIAAVD-NA---IGT-----KGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSYG 179 (600)
T ss_dssp CSTTCCHHHHHHHHHHCCS-SS---SSC-----CCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECCC
T ss_pred CCCCCChHHHHHHHHhEeC-CC---CCc-----EEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEecccC
Confidence 3457899999999999863 22 333 8999999999999998765 4667777665 5677889999999999
Q ss_pred CCCCCCCccch-----HHHHHHH--hhhCCcEEEEecCCCCC
Q 044513 182 SSNPHEYFNDS-----IAIGTFH--AMRNGILTSASAGNDGP 216 (457)
Q Consensus 182 ~~~~~~~~~~~-----~~~~~~~--a~~~gi~vV~AAGN~g~ 216 (457)
.........+. +.+++.. +..+|+++|+||||.+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~ 221 (600)
T 3hjr_A 180 MSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFN 221 (600)
T ss_dssp CCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSS
T ss_pred ccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccc
Confidence 75333222222 2222222 23589999999999764
No 34
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=2.9e-40 Score=360.68 Aligned_cols=267 Identities=24% Similarity=0.285 Sum_probs=179.4
Q ss_pred CeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCccccccceeEEEeccCCCCCCCCCCCCCCCCCCCcchhhhhc
Q 044513 39 DIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNNKIVGARYYKSDGEFGPDDLPSPRDTDGHGSHTASTA 118 (457)
Q Consensus 39 gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGi~ 118 (457)
+|+|||||||+|.+|++...-. .|....+.+ .| .+.+....++.++++ ......|+.||||||||||
T Consensus 214 ~V~VAVIDTG~d~DL~d~~~l~------~Y~~~~dyg-~F--~D~v~~~~n~~Ddgd----~~~~v~D~~GHGThVAGII 280 (1354)
T 3lxu_X 214 DGWLTIVDTTEQGDLDQALRIG------EYSRTHETR-NV--DDFLSISVNVHDEGN----VLEVVGMSSPHGTHVSSIA 280 (1354)
T ss_dssp SSCEEEECSSSSCCSSCSEEEE------CTTTTCCCC-EE--SSSCEEEEEEEGGGT----EEEEEECCCHHHHHHHHHH
T ss_pred CEEEEEEeCCCCCCcccccccc------ccccccccc-cc--ccccCCCCccCCCCC----ccccCCCCCCcHHHHHHHH
Confidence 5999999999987766542110 010000000 00 122333333333211 0012246889999999999
Q ss_pred ccccCccccccccCCcccccccccccEEEeeeecCCCC---CHHHHHHHHHHHHH-----CCCcEEEecCCCCCCCCCcc
Q 044513 119 AGNLVSMASLYGFSSGTARGCVPSARIAVYKICWSDGC---DDADILAAFDDAIA-----DGVDIISLSLGSSNPHEYFN 190 (457)
Q Consensus 119 ag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~---~~~~i~~ai~~a~~-----~~~~Vin~S~G~~~~~~~~~ 190 (457)
+|.. ++. |. .||||+|+|+.+|+++.... ....++.+|.+|++ .+++|||||||... .....
T Consensus 281 Aa~~-N~~---g~-----~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVINmS~G~~~-~~~~~ 350 (1354)
T 3lxu_X 281 SGNH-SSR---DV-----DGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVINMSYGEHA-NWSNS 350 (1354)
T ss_dssp CCCC-SSS---SS-----CCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEEEECCCCCC-SCSSC
T ss_pred hcCC-CCC---Cc-----eeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEEEcCCccCC-CCCcc
Confidence 9997 332 22 89999999999999876432 55678888888877 79999999999973 22334
Q ss_pred chHHHHHHHhh-hCCcEEEEecCCCCCCCC--ccCCC--CCCceEEEeeecCceeeeeEEeCCCceeeceecccccCCCc
Q 044513 191 DSIAIGTFHAM-RNGILTSASAGNDGPSRS--TITNV--APWFISVAASTIDRKFSTKVQLGNNNIYEGISINTYDLQNV 265 (457)
Q Consensus 191 ~~~~~~~~~a~-~~gi~vV~AAGN~g~~~~--~~~~~--~~~~i~Vga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (457)
+.+..++.++. ++|++||+||||+|.... .+++. ++++|+||+++........+...
T Consensus 351 ~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~~------------------ 412 (1354)
T 3lxu_X 351 GRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAMR------------------ 412 (1354)
T ss_dssp CHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC-----------------------
T ss_pred HHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCcccccccc------------------
Confidence 67778888876 799999999999997543 45664 89999999976542110000000
Q ss_pred eeeeEecCCCCCCCCCcCCCCCccCCcCcccccccCCcEEEEecCCCccccccCCceEEEEecCCCCCCCCCCCcceEee
Q 044513 266 TYPLIYGGDAANISGGFTDSSSRFCHQDSLDQNLVKGKIVVCDDLVSGEGPFSAGAVGALMQGQRRRDRAFSFPLPTSYV 345 (457)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (457)
T Consensus 413 -------------------------------------------------------------------------------- 412 (1354)
T 3lxu_X 413 -------------------------------------------------------------------------------- 412 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccHHHHHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecC-CCCCccCCcc
Q 044513 346 DTNDGSDILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSP-VNPVSEVKGT 424 (457)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~-~~~~~~~sGT 424 (457)
....+.++.|||+||+. +++.||||+|||++|.++... .+.|..++||
T Consensus 413 -----------------------------~~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~I~St~~~~~~~y~~~SGT 461 (1354)
T 3lxu_X 413 -----------------------------EKLPGNVYTWTSRDPCI--DGGQGVTVCAPGGAIASVPQFTMSKSQLMNGT 461 (1354)
T ss_dssp ----------------------------------CCCCCCCCSCCS--SSSCCEEEEEEC---------------CCCCG
T ss_pred -----------------------------cCCCCccccccCCCCCc--cCCCcceEEecCceEEEeecCCCCceecCCCC
Confidence 01124679999999998 999999999999999998654 3567788999
Q ss_pred hhhHHHHHHHHHHHHH----hCCCCCHHHHHHHHhcC
Q 044513 425 SMACPHVTGAAAYIKS----FHPTWSPAAIKSALMTT 457 (457)
Q Consensus 425 SmAaP~VAG~aALl~~----~~P~lt~~~i~~~L~~T 457 (457)
|||||+|||++|||++ .+|+|++++||++|++|
T Consensus 462 SmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~T 498 (1354)
T 3lxu_X 462 SMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVT 498 (1354)
T ss_dssp GGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHh
Confidence 9999999999999987 79999999999999986
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.90 E-value=8.8e-25 Score=225.90 Aligned_cols=97 Identities=23% Similarity=0.324 Sum_probs=77.9
Q ss_pred ccccccccEEEeeeecCCCCCHHHHHHHHHHHHH---CCCcEEEecCCCCCCCC--CccchHHHHHHHhhhCCcEEEEec
Q 044513 137 RGCVPSARIAVYKICWSDGCDDADILAAFDDAIA---DGVDIISLSLGSSNPHE--YFNDSIAIGTFHAMRNGILTSASA 211 (457)
Q Consensus 137 ~GvAP~A~l~~~kv~~~~~~~~~~i~~ai~~a~~---~~~~Vin~S~G~~~~~~--~~~~~~~~~~~~a~~~gi~vV~AA 211 (457)
.|+||+|+|+.+++.+ ..+.++.+|+||++ .+++|||||||...... .....+..++.+|..+|++||+||
T Consensus 275 ~gvAp~a~i~~~~~~~----~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~As 350 (552)
T 1t1e_A 275 GALAPGAKIAVYFAPN----TDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAAA 350 (552)
T ss_dssp HHHCTTSEEEEEECCS----SHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hccCCCCeEEEEEcCC----CCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 7999999999999732 45789999999998 78999999999863211 112456777778888999999999
Q ss_pred CCCCCC--------CCccCCCCCCceEEEeeecC
Q 044513 212 GNDGPS--------RSTITNVAPWFISVAASTID 237 (457)
Q Consensus 212 GN~g~~--------~~~~~~~~~~~i~Vga~~~~ 237 (457)
||+|.. ...+++.++++++||+++..
T Consensus 351 Gd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~~ 384 (552)
T 1t1e_A 351 GDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLV 384 (552)
T ss_dssp CSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEE
T ss_pred CCCCCCCCCCCCcccccCcccCCCEEEEeccccc
Confidence 999954 34677899999999997644
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.85 E-value=1.7e-21 Score=191.96 Aligned_cols=101 Identities=17% Similarity=0.209 Sum_probs=80.7
Q ss_pred ccccccccEEEeeeecCCCCCHHHHHHHHHHHHH-CCCcEEEecCCCCCCC---CCccchHHHHHHHhhhCCcEEEEecC
Q 044513 137 RGCVPSARIAVYKICWSDGCDDADILAAFDDAIA-DGVDIISLSLGSSNPH---EYFNDSIAIGTFHAMRNGILTSASAG 212 (457)
Q Consensus 137 ~GvAP~A~l~~~kv~~~~~~~~~~i~~ai~~a~~-~~~~Vin~S~G~~~~~---~~~~~~~~~~~~~a~~~gi~vV~AAG 212 (457)
..+||+++++.+++.+......++++.+|+||++ .+++|||||||..... ......+..++.++..+|++||+|+|
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 4468999999999987655677889999999997 7899999999976211 11234677777788889999999999
Q ss_pred CCCCCC-------------CccCCCCCCceEEEeeecC
Q 044513 213 NDGPSR-------------STITNVAPWFISVAASTID 237 (457)
Q Consensus 213 N~g~~~-------------~~~~~~~~~~i~Vga~~~~ 237 (457)
|+|... ..+|+.++++++||+++..
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 999653 2567889999999997654
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.10 E-value=3.2e-10 Score=116.41 Aligned_cols=67 Identities=13% Similarity=0.287 Sum_probs=50.1
Q ss_pred CCCcEEEecCCCCCCC--CCccchHHHHHHHhhhCCcEEEEecCCCCCCC----------CccCCCCCCceEEEeeecC
Q 044513 171 DGVDIISLSLGSSNPH--EYFNDSIAIGTFHAMRNGILTSASAGNDGPSR----------STITNVAPWFISVAASTID 237 (457)
Q Consensus 171 ~~~~Vin~S~G~~~~~--~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~----------~~~~~~~~~~i~Vga~~~~ 237 (457)
..++|||+|||..... ..+...+..++.++..+|+.||+|+||+|... ..+++.+|++++||+++..
T Consensus 297 ~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l~ 375 (544)
T 3edy_A 297 ALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSFQ 375 (544)
T ss_dssp SCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEES
T ss_pred CCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCCCCccccCCCCCccccCCCcCCCCcEEEEeeeecc
Confidence 3569999999987321 11234556666678889999999999998642 3577899999999997643
No 38
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=96.69 E-value=0.0051 Score=53.90 Aligned_cols=83 Identities=13% Similarity=0.074 Sum_probs=63.9
Q ss_pred CCccCCcCcccccc-------cCCcEEEEecCC------CccccccCCceEEEEecCCCC-C------CCCCCCcceEee
Q 044513 286 SSRFCHQDSLDQNL-------VKGKIVVCDDLV------SGEGPFSAGAVGALMQGQRRR-D------RAFSFPLPTSYV 345 (457)
Q Consensus 286 ~~~~~~~~~~~~~~-------~~g~i~~~~~~~------~~~~~~~~g~~~~~~~~~~~~-~------~~~~~~~~~~~~ 345 (457)
...+|......... .+++|+|+.|+. |..++..+|+.+++|||+... . ......+|++++
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 35689876543222 468999988876 778999999999999997421 1 123356999999
Q ss_pred ccccHHHHHHHHHhCCCcEEEEe
Q 044513 346 DTNDGSDILLYINSTRNATATIY 368 (457)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~ 368 (457)
+..++..|++.+......++++.
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~ 184 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIE 184 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEE
Confidence 99999999999999887777774
No 39
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=92.00 E-value=0.13 Score=57.57 Aligned_cols=58 Identities=17% Similarity=0.289 Sum_probs=39.6
Q ss_pred cccCCchh-cccCCCCCCCeEEEEeecccCCCCCCCCCCCCCCCCCccccccccCCcccccc-ceeEEEeccCCCCCC
Q 044513 22 DFMGFSQQ-VERSTTEESDIVIGVFDTGIWPESESFNGTGFGPPPTKWRGSCQVSANFTCNN-KIVGARYYKSDGEFG 97 (457)
Q Consensus 22 ~~~~~~~~-~~~~g~~G~gv~V~ViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~ 97 (457)
+.+++... .....++|+||+|||+|||||+.+|-|.-.--+ -. ||+.-.+++..++.+
T Consensus 19 ~et~~~~fl~~~P~ydGrgv~iai~DtGVDP~a~glq~t~dG------------------~~~Kiid~~D~tG~GDVd 78 (1354)
T 3lxu_X 19 AETGVLNFLQKYPEYDGRDVTIAIFDSGVDPRATGLETLCDG------------------KTVKVIERYDCSGCGDVD 78 (1354)
T ss_dssp CTTTTCSSGGGSTTCSSTTCEEEEEESCCCTTSTTSSCCTTS------------------SSCSCCEEEETTSTTEEE
T ss_pred hHhhHHHHHHhCCCCCCCccEEEEEeCCCCCCCCcceecCCC------------------CcceeEEEEeCCCCCccc
Confidence 34555542 234579999999999999999999999642111 13 677777777665543
No 40
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=73.76 E-value=1.6 Score=30.04 Aligned_cols=30 Identities=17% Similarity=0.212 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCHHHHHHHHhc
Q 044513 427 ACPHVTGAAAYIKSFHPTWSPAAIKSALMT 456 (457)
Q Consensus 427 AaP~VAG~aALl~~~~P~lt~~~i~~~L~~ 456 (457)
..|..--.+..|++.||+++...|+.+|..
T Consensus 5 ~~~~~ee~l~~L~emFP~ld~~~I~~vL~a 34 (59)
T 1wgl_A 5 SSGCSEEDLKAIQDMFPNMDQEVIRSVLEA 34 (59)
T ss_dssp SSSSCHHHHHHHHHHCSSSCHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence 334444567889999999999999999975
No 41
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=71.17 E-value=7.7 Score=38.39 Aligned_cols=71 Identities=14% Similarity=0.215 Sum_probs=51.7
Q ss_pred ccccCCcEEEEecCCC------------------ccccccCCceEEEEecCCCCCC----------C-CCCCcceEeecc
Q 044513 297 QNLVKGKIVVCDDLVS------------------GEGPFSAGAVGALMQGQRRRDR----------A-FSFPLPTSYVDT 347 (457)
Q Consensus 297 ~~~~~g~i~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~ 347 (457)
..+++|||+|+.++.. ..++.++|+.++++++...... . ....+|+..++.
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 4589999999987532 1246789999999998643210 1 124689999999
Q ss_pred ccHHHHHHHHHhCCCcEEEE
Q 044513 348 NDGSDILLYINSTRNATATI 367 (457)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~ 367 (457)
.++..|...+.......+++
T Consensus 204 ~da~~L~~~l~~g~~~~v~l 223 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISL 223 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEE
Confidence 99999999988765555554
No 42
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=70.62 E-value=1.6 Score=43.34 Aligned_cols=251 Identities=18% Similarity=0.256 Sum_probs=142.8
Q ss_pred cccEEEeeeecCCCCCHHHHHHHHHHHHHCCCcEEEecCCCCCCCCCccchHHHHHHHhhhCCcEEEEecCCCCCCCCcc
Q 044513 142 SARIAVYKICWSDGCDDADILAAFDDAIADGVDIISLSLGSSNPHEYFNDSIAIGTFHAMRNGILTSASAGNDGPSRSTI 221 (457)
Q Consensus 142 ~A~l~~~kv~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~ 221 (457)
+++++.+.+... .....+.+++++|.+.|+-|+ .|-|-..... ... -+..++++-|.|.-+++... .+
T Consensus 122 g~~Vin~S~G~~--~~~~~~~~ai~~a~~~gv~vV-~AAGN~g~~~-~~~-------Pa~~~~vi~VgA~~~~~~~~-~~ 189 (441)
T 1y9z_A 122 GANVVTMSLGGS--GSTTTERNALNTHYNNGVLLI-AAAGNAGDSS-YSY-------PASYDSVMSVAAVDSNLDHA-AF 189 (441)
T ss_dssp CCSEEEECCCBS--CCBHHHHHHHHHHHHTTCEEE-EECCSSSSSB-CCB-------TTTSTTEEEEEEECTTCCBC-TT
T ss_pred CCcEEEeCCCCC--CCCHHHHHHHHHHHHCCCEEE-EecCCCCCCC-CCC-------CCCCCCeEEEEEECCCCCCC-cc
Confidence 678887766332 233457789999998886444 4546542111 111 12346888888888776432 22
Q ss_pred CCCCCCceEEEeeecCceeeeeEEeCCCc----eeeceeccccc--CCCceee--eEecCCCCCCCCCcCCCCCccCCcC
Q 044513 222 TNVAPWFISVAASTIDRKFSTKVQLGNNN----IYEGISINTYD--LQNVTYP--LIYGGDAANISGGFTDSSSRFCHQD 293 (457)
Q Consensus 222 ~~~~~~~i~Vga~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (457)
.+..+ .+.|.+.-. .+......+++. .+.+.++.... +....++ +.+..... ..........|...
T Consensus 190 S~~g~-~vdv~ApG~--~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~---~g~~~~~~~~C~~~ 263 (441)
T 1y9z_A 190 SQYTD-QVEISGPGE--AILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPI---NASATGALAECTVN 263 (441)
T ss_dssp SCCCT-TEEEEEECS--SEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCC---CCEEEEEEEEEEEE
T ss_pred ccCCC-ceEEEeccC--CeeccccCCCcccceeecccccccccccCcccccccCCcccccccc---ccccccchhccccc
Confidence 22111 223322111 111111111111 12222221110 0000000 01111000 00011123457654
Q ss_pred --cccccccCCcEEEEecCC----------CccccccCCceEEEEecCCCCC---------CCCCCCcceEeeccccHHH
Q 044513 294 --SLDQNLVKGKIVVCDDLV----------SGEGPFSAGAVGALMQGQRRRD---------RAFSFPLPTSYVDTNDGSD 352 (457)
Q Consensus 294 --~~~~~~~~g~i~~~~~~~----------~~~~~~~~g~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 352 (457)
.+...+++|||++|.++. +..++...|+.+++++++.... ......+|...++..++..
T Consensus 264 ~~~~~~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~ 343 (441)
T 1y9z_A 264 GTSFSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLA 343 (441)
T ss_dssp TTEEECCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHH
T ss_pred cccccCCCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHH
Confidence 456789999999999864 3556789999999999876432 1234678999999999988
Q ss_pred HHHHHHhCCCcEEEEeeeccccCCCCCccccccCCCCCCCCCCCCCCceeecCccEEeeecCCCCCccCCcchhhHHHHH
Q 044513 353 ILLYINSTRNATATIYRSTEGNNTLAPIVGSLSSRGPNPITPDILKPDISAPGIDILAAWSPVNPVSEVKGTSMACPHVT 432 (457)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ss~Gp~~~~~~~~KPdi~APG~~i~s~~~~~~~~~~~sGTSmAaP~VA 432 (457)
++.++.+. + .+ ++. ....|..++||||||||||
T Consensus 344 l~~~~~~~----~----------------------------------t~--------~~~-~~~~y~~~sGTSmAaP~VA 376 (441)
T 1y9z_A 344 LKAKLGQS----T----------------------------------TV--------SNQ-GNQDYEYYNGTSMATPHVS 376 (441)
T ss_dssp HHTTTTSE----E----------------------------------EE--------EEE-EEESEEEECSHHHHHHHHH
T ss_pred HHHHhcCC----c----------------------------------cc--------ccc-cCCCceeecccccCCcccc
Confidence 87643221 1 11 111 1235777899999999999
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 433 GAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 433 G~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
|++|||+|++|+|+++|||++|++|
T Consensus 377 G~aALl~~~~p~~sp~~ik~~L~~T 401 (441)
T 1y9z_A 377 GVATLVWSYHPECSASQVRAALNAT 401 (441)
T ss_dssp HHHHHHHHHCTTSCHHHHHHHHHHH
T ss_pred hHHHHHHHHCCCCCHHHHHHHHHhh
Confidence 9999999999999999999999976
No 43
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=65.64 E-value=7.3 Score=38.23 Aligned_cols=62 Identities=10% Similarity=0.078 Sum_probs=48.0
Q ss_pred ccccCCcEEEEecC-----CCccccccCCceEEEEecCCCCCCC------CCCCcceEeeccccHHHHHHHHH
Q 044513 297 QNLVKGKIVVCDDL-----VSGEGPFSAGAVGALMQGQRRRDRA------FSFPLPTSYVDTNDGSDILLYIN 358 (457)
Q Consensus 297 ~~~~~g~i~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 358 (457)
..+++|||+|+.++ .|..++...|+.+++++++...... ....+|+..++..++..+...+.
T Consensus 110 ~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 110 GKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred CCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 34799999998765 4667888999999999987532211 23458899999999999998884
No 44
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=57.67 E-value=7.7 Score=32.32 Aligned_cols=31 Identities=19% Similarity=0.124 Sum_probs=26.5
Q ss_pred CcchhhHHHHHHHHHHHHHhCCCCCHHHHHHH
Q 044513 422 KGTSMACPHVTGAAAYIKSFHPTWSPAAIKSA 453 (457)
Q Consensus 422 sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~ 453 (457)
.|-| =|++|-|++|||++.+-..||+||.++
T Consensus 80 ~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 80 FGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp EEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred eeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 4545 379999999999999999999999764
No 45
>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4
Probab=55.44 E-value=10 Score=24.81 Aligned_cols=23 Identities=13% Similarity=0.293 Sum_probs=20.0
Q ss_pred HHHHHHHhCCCCCHHHHHHHHhc
Q 044513 434 AAAYIKSFHPTWSPAAIKSALMT 456 (457)
Q Consensus 434 ~aALl~~~~P~lt~~~i~~~L~~ 456 (457)
-+.+|.+.||+++..+||..|..
T Consensus 7 ~v~~L~EMFP~~~~~~ik~~L~~ 29 (49)
T 1otr_A 7 KLSILMDMFPAISKSKLQVHLLE 29 (49)
T ss_dssp HHHHHHHHCSSSCHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHH
Confidence 35789999999999999998864
No 46
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=51.91 E-value=7.5 Score=31.81 Aligned_cols=31 Identities=19% Similarity=0.162 Sum_probs=26.3
Q ss_pred CcchhhHHHHHHHHHHHHHhCCCCCHHHHHHH
Q 044513 422 KGTSMACPHVTGAAAYIKSFHPTWSPAAIKSA 453 (457)
Q Consensus 422 sGTSmAaP~VAG~aALl~~~~P~lt~~~i~~~ 453 (457)
.|-| =|++|-|++|||++.+-..||+||.+.
T Consensus 73 ~adS-DA~IvkGl~alL~~~~~G~tp~eIl~~ 103 (141)
T 3g0m_A 73 QGDS-DAAIVKGLMAVVFILYHQMTAQDIVHF 103 (141)
T ss_dssp EEEE-SSHHHHHHHHHHHHHHTTCBHHHHHHC
T ss_pred EecC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 4555 379999999999999999999999753
No 47
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.06 E-value=27 Score=24.42 Aligned_cols=23 Identities=22% Similarity=0.255 Sum_probs=19.9
Q ss_pred HHHHHHHhCCCCCHHHHHHHHhc
Q 044513 434 AAAYIKSFHPTWSPAAIKSALMT 456 (457)
Q Consensus 434 ~aALl~~~~P~lt~~~i~~~L~~ 456 (457)
.+..|++.||++..+.|+.+|..
T Consensus 21 ~v~~L~~MFP~lD~~vI~~vL~a 43 (67)
T 2dhy_A 21 AMDDFKTMFPNMDYDIIECVLRA 43 (67)
T ss_dssp HHHHHHHHCSSSCHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHH
Confidence 45679999999999999999864
No 48
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=35.98 E-value=33 Score=35.61 Aligned_cols=61 Identities=15% Similarity=0.135 Sum_probs=44.6
Q ss_pred cccCCcEEEEecCC-----CccccccCCceEEEEecCCCCCC------------------C-------------------
Q 044513 298 NLVKGKIVVCDDLV-----SGEGPFSAGAVGALMQGQRRRDR------------------A------------------- 335 (457)
Q Consensus 298 ~~~~g~i~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~------------------~------------------- 335 (457)
.+++|||+|+.++. |..++...|+.++++|++..... +
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 47999999987753 67788899999999998653110 0
Q ss_pred CCCCcceEeeccccHHHHHHHHH
Q 044513 336 FSFPLPTSYVDTNDGSDILLYIN 358 (457)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~ 358 (457)
..-.+|+..|+..++..|+..+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 01247888899999988876543
No 49
>1wlo_A SUFE protein; structural genomics, riken structural genomics/proteomics in RSGI, unknown function; NMR {Thermus thermophilus}
Probab=35.33 E-value=7.9 Score=31.48 Aligned_cols=25 Identities=24% Similarity=0.248 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHH
Q 044513 428 CPHVTGAAAYIKSFHPTWSPAAIKS 452 (457)
Q Consensus 428 aP~VAG~aALl~~~~P~lt~~~i~~ 452 (457)
|++|-|++||+++.+-..||+||.+
T Consensus 72 A~IvkGl~alL~~~~~G~tp~eIl~ 96 (136)
T 1wlo_A 72 APTVKAFAGLLREGLEGESPEAVLE 96 (136)
T ss_dssp CHHHHHHHHHHHHTTTTCCTTTTTS
T ss_pred cHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 7999999999999999999998854
No 50
>4g3o_A E3 ubiquitin-protein ligase AMFR; all-helical structure, BAG6; 1.60A {Homo sapiens}
Probab=24.72 E-value=85 Score=21.18 Aligned_cols=31 Identities=16% Similarity=0.104 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q 044513 427 ACPHVTGAAAYIKSFHPTWSPAAIKSALMTT 457 (457)
Q Consensus 427 AaP~VAG~aALl~~~~P~lt~~~i~~~L~~T 457 (457)
-.++.-.++-.+++.+|+++.++|+.=|..|
T Consensus 13 ~~sql~~Mve~V~~mFPqv~~~~I~~DL~rT 43 (58)
T 4g3o_A 13 FQGQLNAMAHQIQEMFPQVPYHLVLQDLQLT 43 (58)
T ss_dssp HHHHHHHHHHHHHHHCTTSCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCCCHHHHHHHHHHh
Confidence 4556777888999999999999999877654
No 51
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=23.14 E-value=17 Score=38.30 Aligned_cols=33 Identities=24% Similarity=0.285 Sum_probs=28.2
Q ss_pred ccccCCcEEEEecC-----CCccccccCCceEEEEecC
Q 044513 297 QNLVKGKIVVCDDL-----VSGEGPFSAGAVGALMQGQ 329 (457)
Q Consensus 297 ~~~~~g~i~~~~~~-----~~~~~~~~~g~~~~~~~~~ 329 (457)
..+++|||+|+.++ .|..++...|+.+++||++
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~d 187 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSD 187 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcC
Confidence 45799999998865 4778899999999999985
No 52
>2l5b_A Activator of apoptosis harakiri; BCL-2, BH3-only, transmembrane domain; NMR {Synthetic}
Probab=20.44 E-value=53 Score=18.46 Aligned_cols=16 Identities=25% Similarity=0.285 Sum_probs=12.7
Q ss_pred hhHHHHHHHHHHHHHh
Q 044513 426 MACPHVTGAAAYIKSF 441 (457)
Q Consensus 426 mAaP~VAG~aALl~~~ 441 (457)
.|+.+||..+|-++..
T Consensus 13 caaa~vaalaawll~r 28 (32)
T 2l5b_A 13 CAAAQVAALAAWLLGR 28 (32)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 4788999999987653
No 53
>2ga1_A Protein of unknown function DUF433; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Anabaena variabilis} SCOP: a.4.1.16
Probab=20.21 E-value=61 Score=24.91 Aligned_cols=34 Identities=9% Similarity=0.078 Sum_probs=24.7
Q ss_pred CcchhhHHHHHHHHH------HHHHhCCCCCHHHHHHHHh
Q 044513 422 KGTSMACPHVTGAAA------YIKSFHPTWSPAAIKSALM 455 (457)
Q Consensus 422 sGTSmAaP~VAG~aA------Ll~~~~P~lt~~~i~~~L~ 455 (457)
.||-+..-.+.+..+ -+++.||+|+.++|++.|.
T Consensus 48 ~GTRI~V~~Il~~l~~G~s~eeIl~~yP~Lt~edI~aAL~ 87 (106)
T 2ga1_A 48 RNTRIPVWTLVAYRQQGAPDKELLANYPGLTAEDLSAAWH 87 (106)
T ss_dssp TTSCCBHHHHHHHHHTTCCHHHHHHHSTTCCHHHHHHHHH
T ss_pred ecceeeHHHHHHHHHcCCCHHHHHHHCCCCCHHHHHHHHH
Confidence 566666555554433 3678899999999998874
Done!