BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044515
(167 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 120 CSVCLEGFQDKQQIAKL-SCSHKFHLDCVLPWLAAHPHCPYCRTPVLV 166
CSVCL F++ + + L CSH FHL+C+ WL +H +CP CR PVL+
Sbjct: 135 CSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLL 182
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 118 KICSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVLVS 167
K CSVC+ + + ++ KL CSH++H+ C+ WL+ + CP CR VLV+
Sbjct: 701 KTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVLVA 750
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 114 RSCRKICSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCR 161
+S C+VC++ F+D + ++ C H FH DC+LPWL H CP CR
Sbjct: 210 KSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCR 257
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 118 KICSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVLVS 167
K CSVC+ + + ++ KL CSH++H+ C+ WL+ + CP CR VLV+
Sbjct: 566 KTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVLVA 615
>sp|Q9Y6U7|RN215_HUMAN RING finger protein 215 OS=Homo sapiens GN=RNF215 PE=2 SV=2
Length = 377
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 108 LKLRRCRSCR----------KICSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHC 157
LK RRCR R + C+VCL+ F +KQ + L C H+FH DCV PWL C
Sbjct: 303 LKTRRCRLSRAAQGLPDPGAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTC 362
Query: 158 PYCRTPVL 165
P C+ VL
Sbjct: 363 PLCKFNVL 370
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 118 KICSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVLVS 167
KICSVC+ + ++ +L C H+FH+ C+ WL+ + CP CR PVL S
Sbjct: 630 KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGS 679
>sp|Q5SPX3|RN215_MOUSE RING finger protein 215 OS=Mus musculus GN=Rnf215 PE=2 SV=1
Length = 379
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 108 LKLRRCRSCR----------KICSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHC 157
LK RRCR R + C+VCL+ F +KQ + L C H+FH DCV PWL C
Sbjct: 305 LKTRRCRLSRAAHSLPEPGTETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTC 364
Query: 158 PYCRTPVL 165
P C+ VL
Sbjct: 365 PLCKFNVL 372
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 118 KICSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVLVS 167
K CSVC+ + + ++ KL CSH++H+ C+ WL+ + CP CR VLV+
Sbjct: 583 KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVA 632
>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 105 RWPLKLRRCRSCRKICSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYC 160
WP C S +C++CLE F + Q++ +SC H+FH +CV PWL H CP C
Sbjct: 258 EWPDSGSSCSSA-PVCAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLC 312
>sp|Q5NCP0|RNF43_MOUSE E3 ubiquitin-protein ligase RNF43 OS=Mus musculus GN=Rnf43 PE=2
SV=1
Length = 784
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 104 SRWPLKLRRCRSCRKICSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYC 160
+ WP C S +C++CLE F + Q++ +SC H+FH CV PWL H CP C
Sbjct: 257 AEWPDSGSSCSST-PVCAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQHRTCPLC 312
>sp|O80927|ATL33_ARATH RING-H2 finger protein ATL33 OS=Arabidopsis thaliana GN=ATL33 PE=2
SV=2
Length = 235
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 120 CSVCLEGFQDKQQIAKLS-CSHKFHLDCVLPWLAAHPHCPYCRTPVLV 166
CSVCL F D ++ +LS C H FH+ C+ WL HP+CP CRT V V
Sbjct: 142 CSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRTDVSV 189
>sp|O00237|RN103_HUMAN E3 ubiquitin-protein ligase RNF103 OS=Homo sapiens GN=RNF103 PE=1
SV=1
Length = 685
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 106 WPLKLRRCRSCRKICSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPH-CPYCRTP 163
WP + C C VCLE F++ + L C H FH +C++ WLA H CP CR P
Sbjct: 611 WPADMLHCTEC----VVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRWP 665
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 118 KICSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVLVS 167
K CSVC+ + + ++ KL CSH++H+ C+ WL+ + CP CR VL S
Sbjct: 568 KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLAS 617
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 120 CSVCLEGFQDKQQIAKL-SCSHKFHLDCVLPWLAAHPHCPYCRTPV 164
CSVCL FQD++++ + +CSH FH+DC+ WL + +CP CRT V
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPV 164
C++C+E F+ + +L C H FH +C+ PWL + C CR PV
Sbjct: 396 CTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICRAPV 440
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 115 SCRKICSVCLEGFQDKQQIAKLS-CSHKFHLDCVLPWLAAHPHCPYCRTPVLVS 167
+CR C+VCL F++ + L C H FHL+C+ WL +HP+CP CRT +L S
Sbjct: 152 NCRD-CAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGS 204
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 118 KICSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVLVS 167
K CSVC+ + + ++ KL CSH++H+ C+ WL+ + CP CR VL S
Sbjct: 544 KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLSS 593
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 118 KICSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVL 165
K+CSVC+ + ++ +L C H+FH+ C+ WL+ + CP CR PVL
Sbjct: 612 KVCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVL 659
>sp|Q9R1W3|RN103_MOUSE E3 ubiquitin-protein ligase RNF103 OS=Mus musculus GN=Rnf103 PE=2
SV=2
Length = 683
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 106 WPLKLRRCRSCRKICSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPH-CPYCRTP 163
WP C C VCLE F++ + L C H FH +C++ WLA H CP CR P
Sbjct: 609 WPAGTLHCTEC----VVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRWP 663
>sp|Q9EPZ8|RN103_RAT E3 ubiquitin-protein ligase RNF103 OS=Rattus norvegicus GN=Rnf103
PE=2 SV=1
Length = 682
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 106 WPLKLRRCRSCRKICSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPH-CPYCRTP 163
WP C C VCLE F++ + L C H FH +C++ WLA H CP CR P
Sbjct: 608 WPAGTLHCTEC----VVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRWP 662
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCR 161
C+VC++ F++ + ++ C H +H DC+LPWL H CP CR
Sbjct: 224 CAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCR 265
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVL 165
C++CLE + D +++ + C+H+FH CV PWL H CP+CR ++
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNII 312
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVL 165
C++CLE + D +++ + C+H+FH CV PWL H CP+CR ++
Sbjct: 290 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNII 335
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVL 165
C++CLE + D +++ + C+H+FH CV PWL H CP+CR ++
Sbjct: 293 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNII 338
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVL 165
C++C+E ++ I L C H+FH +C+ PWL H CP C+ VL
Sbjct: 303 CAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVL 348
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCR 161
C VC E + + + +L C+H FH DC++PWL H CP CR
Sbjct: 228 CPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCR 269
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCR 161
C VC E + + + +L C+H FH DC++PWL H CP CR
Sbjct: 227 CPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCR 268
>sp|Q9FG21|ATL71_ARATH Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana
GN=ATL71 PE=3 SV=1
Length = 197
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 104 SRWPLKLRRCRSCRKICSVCLEGFQDKQQIAKL-SCSHKFHLDCVLPWLAAHPHCPYCRT 162
+R L++ S CS+CL ++ I L C+H FH +CV PWL HP CP CRT
Sbjct: 113 ARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRT 172
Query: 163 PVLVS 167
L S
Sbjct: 173 SPLPS 177
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 120 CSVCLEGFQDKQQIAKL-SCSHKFHLDCVLPWLAAHPHCPYCRTPV 164
CSVCL FQ+ +++ + +C H FH+DC+ WL + +CP CRT V
Sbjct: 134 CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 179
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 120 CSVCLEGFQDKQQIAKL-SCSHKFHLDCVLPWLAAHPHCPYCRTPVLVS 167
CSVCL FQ+ + + L C+H FH+ C+ WL +H +CP CR ++ S
Sbjct: 159 CSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTS 207
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 120 CSVCLEGFQDKQQIAKL-SCSHKFHLDCVLPWLAAHPHCPYCR 161
CSVCL +Q ++++ ++ SC H FH++C+ WL +H CP CR
Sbjct: 97 CSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCR 139
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 120 CSVCLEGFQDKQQIAKL-SCSHKFHLDCVLPWLAAHPHCPYCR 161
CSVCL +Q ++++ ++ SC H FH++C+ WL +H CP CR
Sbjct: 111 CSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCR 153
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCR 161
C VC E + + + +L C+H FH DC++PWL H CP CR
Sbjct: 228 CPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCR 269
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVL 165
C+VC+EG++ + L C H FH CV PWL H CP C+ +L
Sbjct: 278 CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNIL 323
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVL 165
C+VC+EG++ + L C H FH CV PWL H CP C+ +L
Sbjct: 277 CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNIL 322
>sp|Q8SV35|Y733_ENCCU Uncharacterized RING finger protein ECU07_0330 OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU07_0330 PE=4 SV=1
Length = 314
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPH-CPYCRTPV 164
C++C+ F Q++ L C H+FH+ CV WL H + CP CRT +
Sbjct: 269 CAICMSNFIKNQRLRVLPCDHRFHVGCVDKWLLGHSNKCPVCRTAI 314
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 120 CSVCLEGFQDKQQIAKL-SCSHKFHLDCVLPWLAAHPHCPYCRTPV 164
CSVCL F++ + + L C+H FHL C+ WL +H +CP CR V
Sbjct: 142 CSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFV 187
>sp|Q8AWW4|RN128_XENLA E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2
SV=2
Length = 404
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 108 LKLRRCRSCRKI-------CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYC 160
L+LR + K+ C+VC+E ++ + L+C+H FH +C+ PWL H CP C
Sbjct: 241 LQLRTIKQGDKVLGPDGDSCAVCIEPYKPSDVVRILTCNHFFHKNCIDPWLLEHRTCPMC 300
Query: 161 RTPVLVS 167
+ +L S
Sbjct: 301 KCDILKS 307
>sp|Q5Z5F2|ATL61_ORYSJ E3 ubiquitin-protein ligase Os06g0535400 OS=Oryza sativa subsp.
japonica GN=Os06g0535400 PE=2 SV=1
Length = 251
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 120 CSVCLEGFQDKQQIAKLS-CSHKFHLDCVLPWLAAHPHCPYCRT 162
C VCL G ++ Q + L C H+FH C+ WL AHP CP CRT
Sbjct: 185 CCVCLAGMREAQALRDLPRCGHRFHAKCIGKWLTAHPTCPVCRT 228
>sp|Q08D68|ZNRF3_XENTR E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis GN=znrf3
PE=2 SV=1
Length = 853
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVL 165
C++CLE + D +++ + C+H+FH CV PWL + CP+CR ++
Sbjct: 266 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNII 311
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVL 165
C++CLE + D +++ + C+H+FH CV PWL + CP+CR ++
Sbjct: 202 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNII 247
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 117 RKICSVCLEGFQDKQQIAKL-SCSHKFHLDCVLPWLAAHPHCPYCRTPVLV 166
R C VCL F++ + + L C+H FH+ C+ WL++H +CP CR + +
Sbjct: 174 RTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAM 224
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVL 165
C+VC+E ++ + L C H FH CV PWL+ H CP C+ +L
Sbjct: 264 CAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNIL 309
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVL 165
C+VC+E ++ + L C H FH CV PWL+ H CP C+ +L
Sbjct: 264 CAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNIL 309
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 120 CSVCLEGFQDKQQIAKLS-CSHKFHLDCVLPWLAAHPHCPYCRTPVLVS 167
C+VCL F+ + Q+ L C H FH DC+ WL ++ CP CR+P+ S
Sbjct: 117 CAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFAS 165
>sp|Q6AY01|RN133_RAT E3 ubiquitin-protein ligase RNF133 OS=Rattus norvegicus GN=Rnf133
PE=2 SV=1
Length = 381
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVL 165
C +C E ++ + + L+C H FH +C+ PW+ AH CP C+ +L
Sbjct: 256 CVICFEAYKPNEIVRILTCKHFFHKNCIDPWILAHGTCPMCKCDIL 301
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVL 165
C+VC+E ++ + L C H FH CV PWL+ H CP C+ +L
Sbjct: 264 CAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNIL 309
>sp|Q14B02|RN133_MOUSE E3 ubiquitin-protein ligase RNF133 OS=Mus musculus GN=Rnf133 PE=1
SV=1
Length = 382
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVL 165
C +C E ++ + + L+C H FH +C+ PW+ AH CP C+ +L
Sbjct: 256 CVICFEAYKPNEIVRILTCKHFFHKNCIDPWILAHGTCPMCKCDIL 301
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCRTPVL 165
C+VC+E F+ K I L C H FH C+ PWL H CP C+ V+
Sbjct: 265 CAVCIENFKVKDVIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVI 310
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 120 CSVCLEGFQDKQQIAKLSCSHKFHLDCVLPWLAAHPHCPYCR 161
C VC E + ++++ +L C+H FH C++PWL H CP CR
Sbjct: 228 CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCR 269
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.138 0.462
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,606,586
Number of Sequences: 539616
Number of extensions: 2276048
Number of successful extensions: 7437
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 207
Number of HSP's that attempted gapping in prelim test: 7027
Number of HSP's gapped (non-prelim): 558
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 57 (26.6 bits)