Query 044519
Match_columns 534
No_of_seqs 431 out of 3934
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 04:00:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044519.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044519hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK11498 bcsA cellulose syntha 100.0 5.3E-48 1.1E-52 418.6 45.1 407 19-464 195-615 (852)
2 TIGR03030 CelA cellulose synth 100.0 7.5E-48 1.6E-52 421.5 46.6 418 18-464 65-504 (713)
3 PRK14583 hmsR N-glycosyltransf 100.0 1.2E-43 2.6E-48 371.1 40.8 242 88-348 72-313 (444)
4 PRK11204 N-glycosyltransferase 100.0 1.8E-43 4E-48 368.9 41.2 243 88-349 51-293 (420)
5 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 2.6E-40 5.6E-45 344.9 40.1 241 88-345 46-296 (439)
6 PRK05454 glucosyltransferase M 100.0 2.8E-39 6.1E-44 346.8 48.4 262 88-362 121-398 (691)
7 cd06437 CESA_CaSu_A2 Cellulose 100.0 2.3E-41 4.9E-46 324.6 24.2 232 91-335 1-232 (232)
8 PRK14716 bacteriophage N4 adso 100.0 2E-37 4.3E-42 321.8 38.1 241 88-345 63-334 (504)
9 COG1215 Glycosyltransferases, 100.0 1.1E-36 2.4E-41 320.2 31.2 236 90-342 53-291 (439)
10 cd04191 Glucan_BSP_ModH Glucan 100.0 4E-37 8.6E-42 296.0 21.9 236 93-337 1-253 (254)
11 cd06427 CESA_like_2 CESA_like_ 100.0 5.1E-37 1.1E-41 296.1 22.6 236 91-343 1-238 (241)
12 PRK11234 nfrB bacteriophage N4 100.0 5.7E-35 1.2E-39 315.3 34.8 238 88-343 60-337 (727)
13 TIGR03472 HpnI hopanoid biosyn 100.0 1.2E-34 2.7E-39 296.5 33.0 231 88-335 38-272 (373)
14 cd06435 CESA_NdvC_like NdvC_li 100.0 1.1E-35 2.4E-40 285.8 21.9 234 94-342 1-235 (236)
15 PRK15489 nfrB bacteriophage N4 100.0 2.7E-33 5.8E-38 298.1 36.7 292 35-345 16-347 (703)
16 cd06421 CESA_CelA_like CESA_Ce 100.0 4.5E-34 9.7E-39 274.1 21.4 230 91-338 1-233 (234)
17 PF13641 Glyco_tranf_2_3: Glyc 100.0 1.8E-35 3.8E-40 282.9 11.2 225 91-334 1-228 (228)
18 PLN02893 Cellulose synthase-li 100.0 4.2E-31 9.2E-36 278.0 39.9 312 46-363 56-523 (734)
19 cd02520 Glucosylceramide_synth 100.0 6.6E-34 1.4E-38 265.5 16.4 191 91-334 1-195 (196)
20 cd04190 Chitin_synth_C C-termi 100.0 1.7E-33 3.7E-38 271.6 13.5 204 95-337 1-243 (244)
21 cd06434 GT2_HAS Hyaluronan syn 100.0 3.4E-31 7.3E-36 254.4 18.6 222 92-336 1-233 (235)
22 TIGR03469 HonB hopene-associat 100.0 5.7E-29 1.2E-33 255.6 29.6 228 88-333 37-280 (384)
23 cd04192 GT_2_like_e Subfamily 100.0 7.8E-30 1.7E-34 243.6 19.9 222 95-334 1-229 (229)
24 cd06439 CESA_like_1 CESA_like_ 100.0 1.1E-29 2.5E-34 246.4 20.9 224 88-337 26-250 (251)
25 PF03142 Chitin_synth_2: Chiti 100.0 4.4E-29 9.6E-34 256.9 26.0 245 88-340 22-379 (527)
26 COG2943 MdoH Membrane glycosyl 100.0 8.7E-26 1.9E-30 222.7 36.8 395 43-460 101-551 (736)
27 PLN02195 cellulose synthase A 100.0 1.6E-25 3.6E-30 239.4 41.1 273 88-365 249-754 (977)
28 PLN02189 cellulose synthase 100.0 8.7E-26 1.9E-30 242.8 37.4 273 88-365 328-819 (1040)
29 cd02525 Succinoglycan_BP_ExoA 100.0 1.7E-27 3.8E-32 230.3 22.3 230 92-342 1-234 (249)
30 PLN02248 cellulose synthase-li 100.0 4E-26 8.7E-31 245.8 34.0 200 161-365 586-914 (1135)
31 PLN02638 cellulose synthase A 100.0 1.4E-25 3.1E-30 241.8 37.1 273 88-365 346-857 (1079)
32 PLN02400 cellulose synthase 99.9 1.6E-24 3.5E-29 233.9 36.5 273 88-365 353-862 (1085)
33 PLN02190 cellulose synthase-li 99.9 1.1E-24 2.4E-29 228.3 34.1 305 47-363 51-537 (756)
34 PLN02436 cellulose synthase A 99.9 4E-24 8.6E-29 229.9 38.2 273 88-366 362-874 (1094)
35 PLN02915 cellulose synthase A 99.9 5.9E-24 1.3E-28 228.8 36.5 84 282-365 734-821 (1044)
36 cd02510 pp-GalNAc-T pp-GalNAc- 99.9 1.9E-25 4.1E-30 222.4 18.5 209 94-318 1-227 (299)
37 cd06438 EpsO_like EpsO protein 99.9 1.3E-25 2.7E-30 207.2 14.4 180 95-294 1-183 (183)
38 cd04184 GT2_RfbC_Mx_like Myxoc 99.9 3.9E-25 8.6E-30 207.0 17.2 197 91-314 1-199 (202)
39 cd04195 GT2_AmsE_like GT2_AmsE 99.9 1.2E-24 2.6E-29 203.6 17.3 197 94-314 1-199 (201)
40 cd06436 GlcNAc-1-P_transferase 99.9 8.8E-25 1.9E-29 202.9 15.1 179 95-291 1-191 (191)
41 cd06433 GT_2_WfgS_like WfgS an 99.9 1E-22 2.2E-27 190.0 16.4 192 94-315 1-193 (202)
42 cd02526 GT2_RfbF_like RfbF is 99.9 9.5E-23 2.1E-27 195.9 15.4 202 95-320 1-208 (237)
43 PF13632 Glyco_trans_2_3: Glyc 99.9 1.3E-22 2.8E-27 188.7 15.8 142 192-335 1-143 (193)
44 cd04196 GT_2_like_d Subfamily 99.9 1.7E-22 3.7E-27 190.7 15.8 199 94-313 1-200 (214)
45 cd04185 GT_2_like_b Subfamily 99.9 2.7E-22 5.8E-27 187.9 16.2 177 95-322 1-179 (202)
46 PLN02726 dolichyl-phosphate be 99.9 7.5E-22 1.6E-26 190.5 19.7 209 88-319 6-221 (243)
47 PF03552 Cellulose_synt: Cellu 99.9 1.1E-21 2.4E-26 205.4 21.7 289 160-461 166-607 (720)
48 cd06420 GT2_Chondriotin_Pol_N 99.9 7.2E-22 1.5E-26 181.7 17.6 176 95-315 1-180 (182)
49 cd06442 DPM1_like DPM1_like re 99.9 1.8E-21 3.8E-26 185.3 19.1 203 95-319 1-206 (224)
50 cd04186 GT_2_like_c Subfamily 99.9 4.9E-22 1.1E-26 179.3 14.5 163 95-316 1-165 (166)
51 cd06423 CESA_like CESA_like is 99.9 7.2E-22 1.6E-26 179.3 15.5 180 95-291 1-180 (180)
52 PRK10073 putative glycosyl tra 99.9 1.3E-21 2.8E-26 196.2 18.5 202 89-313 4-213 (328)
53 cd06913 beta3GnTL1_like Beta 1 99.9 2.1E-21 4.5E-26 184.4 18.8 200 95-314 1-207 (219)
54 cd02522 GT_2_like_a GT_2_like_ 99.9 1.9E-21 4.2E-26 184.6 18.6 184 93-314 1-184 (221)
55 PRK10018 putative glycosyl tra 99.9 1.1E-20 2.4E-25 184.4 21.0 226 89-343 3-232 (279)
56 COG1216 Predicted glycosyltran 99.9 2.2E-20 4.7E-25 186.3 18.5 213 90-320 2-224 (305)
57 PRK10063 putative glycosyl tra 99.8 1.1E-19 2.4E-24 175.2 18.4 189 91-314 1-194 (248)
58 cd04188 DPG_synthase DPG_synth 99.8 1.4E-19 3.1E-24 170.7 17.0 200 95-319 1-209 (211)
59 PF13506 Glyco_transf_21: Glyc 99.8 4E-20 8.7E-25 167.9 11.6 154 171-333 15-175 (175)
60 PTZ00260 dolichyl-phosphate be 99.8 1.7E-18 3.6E-23 173.9 23.9 207 88-312 67-288 (333)
61 TIGR01556 rhamnosyltran L-rham 99.8 5.9E-19 1.3E-23 174.2 17.6 197 99-320 2-205 (281)
62 PF00535 Glycos_transf_2: Glyc 99.8 1.4E-19 3.1E-24 163.1 7.1 169 94-281 1-169 (169)
63 cd04179 DPM_DPG-synthase_like 99.8 2E-18 4.4E-23 159.0 13.6 179 95-297 1-184 (185)
64 PF10111 Glyco_tranf_2_2: Glyc 99.8 8.7E-18 1.9E-22 165.3 18.4 205 94-317 1-223 (281)
65 KOG2571 Chitin synthase/hyalur 99.8 2.5E-17 5.5E-22 175.5 21.3 147 188-336 439-598 (862)
66 PRK13915 putative glucosyl-3-p 99.8 2.8E-17 6.1E-22 162.8 17.5 198 88-309 28-238 (306)
67 KOG2547 Ceramide glucosyltrans 99.7 3E-17 6.6E-22 156.7 15.0 229 88-333 82-314 (431)
68 cd04187 DPM1_like_bac Bacteria 99.7 4.8E-17 1E-21 149.5 14.1 174 95-295 1-178 (181)
69 PRK10714 undecaprenyl phosphat 99.7 2.2E-15 4.8E-20 150.9 26.3 193 90-312 5-200 (325)
70 cd00761 Glyco_tranf_GTA_type G 99.6 3.4E-15 7.4E-20 131.8 14.7 152 95-306 1-155 (156)
71 KOG2978 Dolichol-phosphate man 99.6 1.2E-14 2.6E-19 126.1 15.9 202 91-312 3-209 (238)
72 cd02511 Beta4Glucosyltransfera 99.5 3.3E-13 7.1E-18 129.0 14.3 105 92-223 1-105 (229)
73 COG0463 WcaA Glycosyltransfera 99.4 1.8E-12 4E-17 121.3 11.4 106 90-214 2-107 (291)
74 KOG3737 Predicted polypeptide 99.4 1.8E-12 4E-17 124.5 9.8 210 87-313 151-384 (603)
75 KOG3738 Predicted polypeptide 99.4 1E-12 2.2E-17 126.6 7.4 205 88-313 121-344 (559)
76 KOG3736 Polypeptide N-acetylga 99.3 4.8E-12 1E-16 131.5 6.0 211 88-315 139-368 (578)
77 KOG2977 Glycosyltransferase [G 99.2 5.5E-10 1.2E-14 103.9 16.9 209 92-320 68-291 (323)
78 cd02514 GT13_GLCNAC-TI GT13_GL 99.1 3.2E-09 6.9E-14 105.0 16.3 173 93-305 2-198 (334)
79 PF13712 Glyco_tranf_2_5: Glyc 98.9 5.6E-09 1.2E-13 98.2 9.4 181 93-322 1-203 (217)
80 cd00899 b4GalT Beta-4-Galactos 98.7 7.5E-08 1.6E-12 88.9 10.1 177 92-338 3-199 (219)
81 PF03452 Anp1: Anp1; InterPro 98.1 1.8E-05 3.8E-10 75.4 9.7 116 88-212 22-166 (269)
82 COG4092 Predicted glycosyltran 97.8 0.00069 1.5E-08 63.1 15.0 196 91-300 2-215 (346)
83 PF09488 Osmo_MPGsynth: Mannos 97.7 0.00034 7.3E-09 68.3 10.5 131 90-231 49-205 (381)
84 PF03071 GNT-I: GNT-I family; 97.6 0.00043 9.4E-09 70.5 11.3 187 88-307 90-295 (434)
85 KOG3588 Chondroitin synthase 1 97.6 0.0019 4.2E-08 62.9 14.8 202 88-314 226-435 (494)
86 PRK14503 mannosyl-3-phosphogly 97.6 0.00067 1.5E-08 66.2 11.3 130 89-229 49-204 (393)
87 TIGR02460 osmo_MPGsynth mannos 97.6 0.00076 1.7E-08 65.4 11.3 130 89-229 48-203 (381)
88 PF05679 CHGN: Chondroitin N-a 97.4 0.0094 2E-07 63.4 17.6 205 89-313 245-464 (499)
89 PRK14502 bifunctional mannosyl 97.1 0.0045 9.8E-08 66.6 11.5 111 89-210 53-185 (694)
90 KOG3916 UDP-Gal:glucosylcerami 97.0 0.0027 5.8E-08 61.5 8.4 136 174-340 199-349 (372)
91 PF02709 Glyco_transf_7C: N-te 96.9 0.00079 1.7E-08 52.0 2.8 49 264-312 18-69 (78)
92 PF13704 Glyco_tranf_2_4: Glyc 96.8 0.0038 8.3E-08 50.5 6.6 82 100-203 1-85 (97)
93 PF11316 Rhamno_transf: Putati 96.6 0.014 3.1E-07 55.3 9.7 93 107-214 45-139 (234)
94 PF03214 RGP: Reversibly glyco 96.1 0.01 2.2E-07 57.6 5.4 36 177-215 82-117 (348)
95 PF06306 CgtA: Beta-1,4-N-acet 95.7 0.027 5.8E-07 54.4 6.7 103 92-210 88-196 (347)
96 KOG1413 N-acetylglucosaminyltr 95.7 0.22 4.8E-06 48.8 12.7 176 88-292 64-257 (411)
97 PF11397 GlcNAc: Glycosyltrans 95.1 0.25 5.5E-06 49.6 11.7 219 93-315 2-261 (343)
98 PF01644 Chitin_synth_1: Chiti 94.5 0.59 1.3E-05 41.3 10.9 46 169-214 117-163 (163)
99 PF01762 Galactosyl_T: Galacto 94.2 0.4 8.8E-06 44.2 9.9 119 177-306 70-192 (195)
100 TIGR03584 PseF pseudaminic aci 94.0 1.6 3.5E-05 41.2 13.8 159 101-283 22-189 (222)
101 PF13733 Glyco_transf_7N: N-te 93.8 0.073 1.6E-06 45.2 3.7 77 90-205 46-127 (136)
102 PLN02917 CMP-KDO synthetase 93.6 6.8 0.00015 38.7 18.0 184 103-310 72-267 (293)
103 cd04182 GT_2_like_f GT_2_like_ 93.4 0.64 1.4E-05 42.1 9.9 93 101-215 24-117 (186)
104 TIGR00466 kdsB 3-deoxy-D-manno 93.1 4.3 9.2E-05 38.8 15.2 187 97-309 19-222 (238)
105 PF09258 Glyco_transf_64: Glyc 92.9 0.2 4.3E-06 48.1 5.6 103 94-219 2-105 (247)
106 TIGR03310 matur_ygfJ molybdenu 92.5 1 2.2E-05 40.9 9.9 99 97-219 20-120 (188)
107 KOG4179 Lysyl hydrolase/glycos 92.0 0.22 4.8E-06 49.7 4.7 109 91-212 3-133 (568)
108 COG1212 KdsB CMP-2-keto-3-deox 91.8 11 0.00024 35.1 17.4 146 159-309 63-220 (247)
109 PF02434 Fringe: Fringe-like; 91.6 0.31 6.6E-06 47.0 5.3 109 188-310 85-204 (252)
110 PF11735 CAP59_mtransfer: Cryp 90.9 4.8 0.0001 38.3 12.4 121 94-225 3-146 (241)
111 cd02540 GT2_GlmU_N_bac N-termi 89.7 4.6 0.0001 37.9 11.6 96 97-216 21-117 (229)
112 cd00218 GlcAT-I Beta1,3-glucur 89.4 5.2 0.00011 37.4 11.0 103 91-210 1-116 (223)
113 PF04666 Glyco_transf_54: N-Ac 89.2 5.9 0.00013 39.0 11.9 122 89-216 50-196 (297)
114 cd02503 MobA MobA catalyzes th 89.0 3.1 6.8E-05 37.5 9.5 50 162-214 59-109 (181)
115 PRK00317 mobA molybdopterin-gu 87.7 4.9 0.00011 36.8 9.9 41 172-215 74-115 (193)
116 TIGR03202 pucB xanthine dehydr 87.4 8.8 0.00019 35.0 11.4 46 173-218 79-125 (190)
117 PLN03153 hypothetical protein; 87.0 3.2 7E-05 43.5 8.8 99 188-311 209-315 (537)
118 PF12804 NTP_transf_3: MobA-li 85.7 4 8.6E-05 35.9 7.9 102 97-224 19-122 (160)
119 cd04181 NTP_transferase NTP_tr 85.1 8.7 0.00019 35.5 10.4 96 97-214 24-119 (217)
120 PLN03180 reversibly glycosylat 85.0 2.1 4.5E-05 42.2 5.9 35 177-214 84-125 (346)
121 cd06422 NTP_transferase_like_1 84.8 8.2 0.00018 36.1 10.1 97 96-213 24-120 (221)
122 PF02364 Glucan_synthase: 1,3- 84.7 7 0.00015 43.5 10.4 180 173-362 275-483 (817)
123 TIGR02665 molyb_mobA molybdopt 84.7 8.5 0.00018 34.8 9.8 41 172-215 73-114 (186)
124 KOG1476 Beta-1,3-glucuronyltra 83.7 14 0.00031 36.1 10.8 101 90-209 86-201 (330)
125 KOG3917 Beta-1,4-galactosyltra 83.3 3.2 7E-05 38.2 6.0 151 87-308 70-227 (310)
126 PRK02726 molybdopterin-guanine 82.7 7.2 0.00016 36.0 8.5 52 161-215 67-119 (200)
127 cd06915 NTP_transferase_WcbM_l 82.4 15 0.00034 34.0 10.9 96 97-214 24-119 (223)
128 cd04183 GT2_BcE_like GT2_BcbE_ 81.8 13 0.00029 34.9 10.2 99 96-213 23-121 (231)
129 PF00483 NTP_transferase: Nucl 81.7 7 0.00015 37.2 8.4 100 97-216 25-128 (248)
130 cd02516 CDP-ME_synthetase CDP- 81.5 27 0.00058 32.4 12.1 103 96-218 22-125 (218)
131 PRK13385 2-C-methyl-D-erythrit 81.4 18 0.00038 34.2 10.9 99 101-218 28-127 (230)
132 PF14097 SpoVAE: Stage V sporu 81.3 23 0.0005 31.3 10.2 91 125-233 3-96 (180)
133 COG1213 Predicted sugar nucleo 81.3 4.3 9.4E-05 38.1 6.2 98 102-223 30-128 (239)
134 cd04189 G1P_TT_long G1P_TT_lon 80.8 20 0.00044 33.7 11.2 97 96-214 25-121 (236)
135 cd06431 GT8_LARGE_C LARGE cata 80.7 29 0.00064 33.9 12.3 117 92-224 2-133 (280)
136 PLN02458 transferase, transfer 80.3 29 0.00064 34.3 11.7 104 89-210 110-223 (346)
137 PRK14353 glmU bifunctional N-a 79.3 23 0.00049 37.3 11.9 103 96-220 27-130 (446)
138 cd02513 CMP-NeuAc_Synthase CMP 79.1 30 0.00066 32.1 11.7 44 173-216 79-125 (223)
139 PF05045 RgpF: Rhamnan synthes 78.8 50 0.0011 35.3 14.1 123 89-227 263-406 (498)
140 TIGR01173 glmU UDP-N-acetylglu 77.1 25 0.00054 36.9 11.5 103 96-224 22-125 (451)
141 PF13896 Glyco_transf_49: Glyc 75.8 41 0.00089 33.6 11.9 54 174-230 115-171 (317)
142 cd06430 GT8_like_2 GT8_like_2 75.7 59 0.0013 32.2 12.6 120 93-224 3-132 (304)
143 PF03213 Pox_P35: Poxvirus P35 75.2 25 0.00055 34.4 9.6 44 188-232 117-161 (325)
144 cd06425 M1P_guanylylT_B_like_N 75.2 17 0.00037 34.3 8.8 100 96-215 25-125 (233)
145 TIGR01207 rmlA glucose-1-phosp 74.9 18 0.00038 35.6 8.9 99 96-214 24-122 (286)
146 cd02538 G1P_TT_short G1P_TT_sh 74.7 77 0.0017 29.9 13.3 98 97-214 26-123 (240)
147 PRK13368 3-deoxy-manno-octulos 74.3 49 0.0011 31.2 11.7 93 101-218 25-118 (238)
148 PRK05450 3-deoxy-manno-octulos 74.3 79 0.0017 29.8 16.5 97 97-217 22-119 (245)
149 PF11051 Mannosyl_trans3: Mann 73.8 32 0.0007 33.5 10.4 22 188-209 89-112 (271)
150 PRK14355 glmU bifunctional N-a 73.4 39 0.00084 35.7 11.8 98 96-216 25-123 (459)
151 cd02517 CMP-KDO-Synthetase CMP 72.8 64 0.0014 30.4 12.2 101 96-220 20-121 (239)
152 PF05060 MGAT2: N-acetylglucos 72.2 27 0.00059 35.2 9.4 47 90-137 30-76 (356)
153 PF05212 DUF707: Protein of un 71.4 17 0.00037 35.2 7.5 209 89-323 39-258 (294)
154 PF04724 Glyco_transf_17: Glyc 71.3 1.2E+02 0.0027 30.8 14.4 124 92-227 80-215 (356)
155 PRK14352 glmU bifunctional N-a 71.0 60 0.0013 34.5 12.6 101 96-217 26-127 (482)
156 cd02508 ADP_Glucose_PP ADP-glu 70.7 35 0.00075 31.3 9.5 110 90-215 19-135 (200)
157 PRK15480 glucose-1-phosphate t 70.1 35 0.00075 33.7 9.7 99 96-214 28-126 (292)
158 cd02524 G1P_cytidylyltransfera 70.0 54 0.0012 31.3 11.0 37 174-214 104-141 (253)
159 cd02509 GDP-M1P_Guanylyltransf 69.9 56 0.0012 31.8 11.1 90 96-203 26-116 (274)
160 COG1209 RfbA dTDP-glucose pyro 68.3 1.2E+02 0.0025 29.5 12.2 198 96-321 25-228 (286)
161 cd06428 M1P_guanylylT_A_like_N 68.1 46 0.001 31.9 10.1 103 96-216 25-128 (257)
162 cd06426 NTP_transferase_like_2 65.3 58 0.0013 30.1 10.0 97 97-216 24-120 (220)
163 PF01697 Glyco_transf_92: Glyc 65.1 75 0.0016 30.8 11.1 104 93-214 3-132 (285)
164 PF07507 WavE: WavE lipopolysa 64.7 32 0.00069 34.2 8.2 47 179-228 88-135 (311)
165 PRK14360 glmU bifunctional N-a 64.7 89 0.0019 32.8 12.3 99 96-217 23-122 (450)
166 PRK14357 glmU bifunctional N-a 64.3 77 0.0017 33.2 11.7 94 96-216 22-116 (448)
167 COG1211 IspD 4-diphosphocytidy 63.5 70 0.0015 30.2 9.8 95 101-214 30-125 (230)
168 PRK09382 ispDF bifunctional 2- 63.0 65 0.0014 33.1 10.4 39 174-215 83-122 (378)
169 PRK14358 glmU bifunctional N-a 62.6 80 0.0017 33.6 11.4 98 96-217 29-127 (481)
170 PHA02688 ORF059 IMV protein VP 62.3 93 0.002 30.7 10.5 44 188-232 115-159 (323)
171 PRK00155 ispD 2-C-methyl-D-ery 61.9 1.4E+02 0.003 27.9 12.4 42 174-217 82-124 (227)
172 cd00505 Glyco_transf_8 Members 60.5 83 0.0018 29.9 10.2 113 95-223 3-128 (246)
173 PRK14489 putative bifunctional 59.8 59 0.0013 33.2 9.5 39 173-214 79-118 (366)
174 PLN03183 acetylglucosaminyltra 59.3 2.3E+02 0.0049 29.6 16.0 106 88-207 75-193 (421)
175 PRK14354 glmU bifunctional N-a 59.1 1.1E+02 0.0023 32.2 11.7 95 96-215 24-119 (458)
176 cd02523 PC_cytidylyltransferas 59.0 52 0.0011 30.8 8.4 92 96-212 23-115 (229)
177 PLN03193 beta-1,3-galactosyltr 59.0 1.3E+02 0.0029 30.9 11.5 113 189-314 236-354 (408)
178 PRK14356 glmU bifunctional N-a 58.4 1.1E+02 0.0025 32.0 11.8 95 97-214 28-123 (456)
179 TIGR02623 G1P_cyt_trans glucos 57.7 1.4E+02 0.0031 28.5 11.4 145 172-335 103-248 (254)
180 COG1208 GCD1 Nucleoside-diphos 57.4 84 0.0018 32.0 10.0 99 97-217 27-125 (358)
181 TIGR03552 F420_cofC 2-phospho- 56.8 1.1E+02 0.0025 27.6 10.1 51 161-214 65-116 (195)
182 cd02518 GT2_SpsF SpsF is a gly 55.4 1.1E+02 0.0025 28.6 10.1 28 189-216 87-115 (233)
183 PF02485 Branch: Core-2/I-Bran 55.4 61 0.0013 30.7 8.3 104 93-212 1-113 (244)
184 cd04198 eIF-2B_gamma_N The N-t 54.3 1.3E+02 0.0028 27.8 10.2 99 96-216 25-126 (214)
185 PLN03133 beta-1,3-galactosyltr 53.8 3.4E+02 0.0074 29.9 17.3 108 189-311 475-595 (636)
186 COG0746 MobA Molybdopterin-gua 53.1 1.2E+02 0.0027 27.7 9.5 53 162-218 62-116 (192)
187 TIGR00453 ispD 2-C-methyl-D-er 51.1 1.6E+02 0.0034 27.2 10.2 42 174-217 77-119 (217)
188 PRK09451 glmU bifunctional N-a 50.9 2E+02 0.0043 30.3 12.0 94 96-214 27-121 (456)
189 TIGR01208 rmlA_long glucose-1- 49.5 1.4E+02 0.003 30.1 10.3 97 97-214 25-121 (353)
190 PF02348 CTP_transf_3: Cytidyl 48.4 2.2E+02 0.0048 26.1 11.6 97 101-219 22-119 (217)
191 TIGR01105 galF UTP-glucose-1-p 46.5 2E+02 0.0044 28.4 10.5 113 90-214 24-154 (297)
192 PRK15171 lipopolysaccharide 1, 46.0 2.7E+02 0.0059 28.0 11.5 119 91-223 24-153 (334)
193 PF03360 Glyco_transf_43: Glyc 43.7 49 0.0011 30.7 5.2 36 175-210 59-98 (207)
194 cd02541 UGPase_prokaryotic Pro 41.9 1.8E+02 0.0039 27.9 9.4 52 160-215 93-146 (267)
195 PRK00576 molybdopterin-guanine 39.8 2.7E+02 0.0059 24.7 10.3 42 173-214 58-100 (178)
196 KOG0916 1,3-beta-glucan syntha 38.8 1.2E+02 0.0026 36.1 8.2 177 173-361 1051-1246(1679)
197 TIGR00454 conserved hypothetic 38.4 2.5E+02 0.0055 25.3 9.1 95 97-217 22-117 (183)
198 PLN02728 2-C-methyl-D-erythrit 38.1 3.7E+02 0.008 25.8 10.9 42 174-216 103-145 (252)
199 TIGR02584 cas_NE0113 CRISPR-as 37.7 3.2E+02 0.0069 25.3 9.3 37 95-131 1-40 (209)
200 KOG0799 Branching enzyme [Carb 37.2 3.6E+02 0.0078 28.3 11.1 106 92-214 104-218 (439)
201 PF10138 vWA-TerF-like: vWA fo 36.8 2.8E+02 0.006 25.7 8.9 101 101-214 84-187 (200)
202 TIGR01099 galU UTP-glucose-1-p 36.0 3.2E+02 0.0068 26.0 10.0 51 161-215 94-146 (260)
203 cd01453 vWA_transcription_fact 36.0 1.2E+02 0.0027 27.3 6.7 38 155-199 132-169 (183)
204 PF01128 IspD: 2-C-methyl-D-er 35.4 3.8E+02 0.0083 25.1 11.1 93 101-216 26-119 (221)
205 PRK14490 putative bifunctional 33.5 2.8E+02 0.0061 28.3 9.6 50 162-214 234-284 (369)
206 KOG2264 Exostosin EXT1L [Signa 33.5 75 0.0016 33.7 5.1 94 91-207 649-742 (907)
207 COG1861 SpsF Spore coat polysa 33.4 3.9E+02 0.0084 25.2 9.2 97 95-215 21-118 (241)
208 COG1519 KdtA 3-deoxy-D-manno-o 32.6 5.5E+02 0.012 26.7 11.1 111 88-228 47-157 (419)
209 cd04194 GT8_A4GalT_like A4GalT 32.0 3.8E+02 0.0082 25.3 9.8 16 189-204 95-110 (248)
210 KOG2287 Galactosyltransferases 31.9 5.5E+02 0.012 26.0 15.3 121 178-310 178-303 (349)
211 PF02590 SPOUT_MTase: Predicte 31.3 3.7E+02 0.0079 23.7 10.1 86 123-217 3-95 (155)
212 PF14979 TMEM52: Transmembrane 30.5 1.3E+02 0.0028 26.0 5.2 33 89-121 60-92 (154)
213 PRK14359 glmU bifunctional N-a 29.1 4.1E+02 0.0089 27.5 10.2 90 97-212 25-116 (430)
214 PF01501 Glyco_transf_8: Glyco 27.3 85 0.0019 29.4 4.3 17 188-204 97-113 (250)
215 KOG1022 Acetylglucosaminyltran 26.7 2E+02 0.0044 30.6 6.8 110 88-220 440-550 (691)
216 COG2068 Uncharacterized MobA-r 25.8 5.3E+02 0.012 23.8 15.9 95 101-216 29-124 (199)
217 PF09837 DUF2064: Uncharacteri 24.6 4.2E+02 0.0091 22.2 8.3 61 160-226 33-94 (122)
218 PRK00844 glgC glucose-1-phosph 24.4 4.3E+02 0.0094 27.3 9.2 103 96-214 30-140 (407)
219 cd06432 GT8_HUGT1_C_like The C 23.0 6.7E+02 0.014 23.9 11.5 95 103-212 13-117 (248)
220 PF09623 Cas_NE0113: CRISPR-as 22.9 2.4E+02 0.0051 26.6 6.1 33 94-126 3-36 (224)
221 TIGR02091 glgC glucose-1-phosp 22.9 2.5E+02 0.0055 28.3 7.1 42 172-214 93-134 (361)
222 PRK00560 molybdopterin-guanine 22.2 5.7E+02 0.012 23.1 8.7 36 173-211 77-113 (196)
223 COG1158 Rho Transcription term 21.6 5.7E+02 0.012 25.8 8.5 44 94-137 177-220 (422)
224 PRK05293 glgC glucose-1-phosph 21.1 3.5E+02 0.0077 27.5 7.8 109 90-214 24-140 (380)
225 PF11181 YflT: Heat induced st 20.9 1.7E+02 0.0036 23.7 4.2 30 96-125 2-31 (103)
226 cd02507 eIF-2B_gamma_N_like Th 20.6 5.8E+02 0.013 23.5 8.5 99 96-212 25-124 (216)
227 KOG1014 17 beta-hydroxysteroid 20.3 4.2E+02 0.0092 26.2 7.4 84 126-228 52-135 (312)
No 1
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=5.3e-48 Score=418.65 Aligned_cols=407 Identities=22% Similarity=0.352 Sum_probs=276.7
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhhhccchhhhhhhchhhhhhcCCCCcEEEE
Q 044519 19 GISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVIL--YVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQ 96 (534)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~VsVi 96 (534)
.++..+..+|....+|.-... ..+++++++++..|..+... ++...+...++. .+.+++ .+..|+|||+
T Consensus 195 ~~~~rY~~WR~~~tL~~~~~~---~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~---~~~~~~---~~~~P~VsVi 265 (852)
T PRK11498 195 TVSCRYIWWRYTSTLNWDDPV---SLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQP---VPLPKD---MSLWPTVDIF 265 (852)
T ss_pred HHHHHHHHHHHheeeCCCchH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC---CCCCcc---cCCCCcEEEE
Confidence 344555567777777754322 23333444444444443322 222221111111 122222 2568999999
Q ss_pred EeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCC
Q 044519 97 IPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYK 174 (534)
Q Consensus 97 IP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~K 174 (534)
||+|||+ +.+++++.++++||||+++++|+|+|| |+|++.+ +++ + .+++|+++++++++|
T Consensus 266 IPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~---------la~----~-----~~v~yI~R~~n~~gK 327 (852)
T PRK11498 266 VPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQ---------FAQ----E-----VGVKYIARPTHEHAK 327 (852)
T ss_pred EecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHH---------HHH----H-----CCcEEEEeCCCCcch
Confidence 9999999 678999999999999998888888877 5554433 443 2 468899888888899
Q ss_pred hhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCc--hhhHhHhh--hcccchh
Q 044519 175 AGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADEC--LMTRLQEM--SLDYHFS 250 (534)
Q Consensus 175 a~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~--~~~~~~~~--~~~~~~~ 250 (534)
++|+|.|++++ +||||+++|||++++||+|++++..|.+||++++||+++.+.|++.- ...+.+.. +....+.
T Consensus 328 AGnLN~aL~~a---~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~ 404 (852)
T PRK11498 328 AGNINNALKYA---KGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYG 404 (852)
T ss_pred HHHHHHHHHhC---CCCEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEEcceeccCCchHHHhhHHHhhcccchhHHHH
Confidence 99999999999 99999999999999999999999998899999999999888776421 01111111 1111222
Q ss_pred hhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHHHhh
Q 044519 251 VEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHR 330 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~R 330 (534)
..+... .......++|+++++||++++++|||++++++||.|++.|++++||++.|++++.+.++.|+|++++.+||.|
T Consensus 405 ~iq~g~-~~~~a~~~~Gs~aviRReaLeeVGGfd~~titED~dlslRL~~~Gyrv~yl~~~~a~glaPesl~~~~~QR~R 483 (852)
T PRK11498 405 LVQDGN-DMWDATFFCGSCAVIRRKPLDEIGGIAVETVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQRIR 483 (852)
T ss_pred HHHhHH-HhhcccccccceeeeEHHHHHHhcCCCCCccCccHHHHHHHHHcCCEEEEEeccceeEECCCCHHHHHHHHHH
Confidence 223222 2222344689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhHHhhhhhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc-----cchhHHHHHHHHH
Q 044519 331 WSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWVTFFFYCIVIPTSVLVPE-----IQLTKPIAIYIPA 405 (534)
Q Consensus 331 W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~-----~~~~~~~~~~l~~ 405 (534)
|++|.+|+++++. .+..++++..++++++...+. ++..+. -+.+ ++.|+.+++.. .....+..+++|.
T Consensus 484 WarG~lQi~r~~~--pl~~~gL~~~qRl~y~~~~l~---~l~g~~-~l~~-l~~Pl~~l~~gi~~i~a~~~~i~~y~lP~ 556 (852)
T PRK11498 484 WARGMVQIFRLDN--PLTGKGLKLAQRLCYANAMLH---FLSGIP-RLIF-LTAPLAFLLLHAYIIYAPALMIALFVLPH 556 (852)
T ss_pred HHHHHHHHHHHhC--hhccCCCCHHHHHHHHHHHHH---HHHHHH-HHHH-HHHHHHHHHhCChheeCChHHHHHHHHHH
Confidence 9999999998753 344678999999986654432 111211 1122 33355444321 1122233445555
Q ss_pred HHHHHHHhhccchhHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCceEEcccCCCccc
Q 044519 406 TITLLNAVCTPRSFHLIVFW-ILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTKK 464 (534)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~a~l~gl~~~~~~~~~~~T~K~~~~~~ 464 (534)
++.........+......+| .+++.+++...+.+++.++++ .++.+|+||||++..++
T Consensus 557 ~~~~~l~~~~~~g~~r~~~wseiye~v~a~~l~~~~~~~ll~-p~~~~F~VTpKg~~~~~ 615 (852)
T PRK11498 557 MIHASLTNSRIQGKYRHSFWSEIYETVLAWYIAPPTTVALFN-PHKGKFNVTAKGGLVEE 615 (852)
T ss_pred HHHHHHHHHHhcCcchHhHHHHHHHHHHHHHHHHHHHHHHcC-ccCCCcccCCCCccccc
Confidence 54432222111111122444 478888888888888888884 46789999999876554
No 2
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=7.5e-48 Score=421.52 Aligned_cols=418 Identities=25% Similarity=0.362 Sum_probs=278.2
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhhhccchhhhhhhchhhhhhcCCCCcEEE
Q 044519 18 SGISYAWNSIRASVIVPLLHLAIILCSVMSLMLFIERVYMAIVIL--YVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLV 95 (534)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~VsV 95 (534)
..+...+..+|....+|.- ..+..+.+++++++..+..+... ++...++.+++. .+.+. .++..|+|||
T Consensus 65 ~~~~~~y~~wr~~~tl~~~---~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~---~~~~~---~~~~~P~VsV 135 (713)
T TIGR03030 65 VFISLRYLWWRLTETLPFD---NTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTP---VPLPL---DPEEWPTVDV 135 (713)
T ss_pred HHHHHHHHHhheeeecCCC---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCc---cCCCC---CcccCCeeEE
Confidence 4445556677777777742 22233444455555554443322 122222221111 11111 1256899999
Q ss_pred EEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchh-----hhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 96 QIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTD-----FFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 96 iIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~-----~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
+||+|||+ +.+++|++++++|+||+++++|+|+|| |+|+|.... +.+...+.+++.+++ .+++|++|+
T Consensus 136 iIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~-----~~v~yi~r~ 210 (713)
T TIGR03030 136 FIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRK-----LGVNYITRP 210 (713)
T ss_pred EEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHH-----cCcEEEECC
Confidence 99999999 566889999999999987777766655 788763210 000001233334433 578899888
Q ss_pred CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCC---chh--hHhHhh
Q 044519 169 NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADE---CLM--TRLQEM 243 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~---~~~--~~~~~~ 243 (534)
++.++|++|+|.|++++ +|||++++|||++++||+|++++..|.+||++++||+++.+.|++. +.. .+...
T Consensus 211 ~n~~~KAgnLN~al~~a---~gd~Il~lDAD~v~~pd~L~~~v~~f~~dp~v~~Vqtp~~f~~p~~~~~nl~~~~~~~~- 286 (713)
T TIGR03030 211 RNVHAKAGNINNALKHT---DGELILIFDADHVPTRDFLQRTVGWFVEDPKLFLVQTPHFFVSPDPIERNLGTFRRMPN- 286 (713)
T ss_pred CCCCCChHHHHHHHHhc---CCCEEEEECCCCCcChhHHHHHHHHHHhCCCEEEEeCCeeccCCCHHhhhhHHHHHhhh-
Confidence 88889999999999999 9999999999999999999999999988999999999988777542 110 11110
Q ss_pred hcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHH
Q 044519 244 SLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKA 323 (534)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~ 323 (534)
+....+...+... .......++|+++++||++++++|||++++++||.+++.|++++||+++|+|++.++++.|+|+++
T Consensus 287 e~~~f~~~i~~g~-~~~~~~~~~Gs~~~iRR~al~~iGGf~~~~vtED~~l~~rL~~~G~~~~y~~~~~~~g~~p~sl~~ 365 (713)
T TIGR03030 287 ENELFYGLIQDGN-DFWNAAFFCGSAAVLRREALDEIGGIAGETVTEDAETALKLHRRGWNSAYLDRPLIAGLAPETLSG 365 (713)
T ss_pred HHHHHHHHHHHHH-hhhCCeeecCceeEEEHHHHHHcCCCCCCCcCcHHHHHHHHHHcCCeEEEeccccccccCCCCHHH
Confidence 1111122222222 222233468999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccchhhHHhhhhhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc-----cchhHH
Q 044519 324 YRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWVTFFFYCIVIPTSVLVPE-----IQLTKP 398 (534)
Q Consensus 324 ~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~-----~~~~~~ 398 (534)
+.+||.||++|.+|+++.. +.+..+++++.+|++++...+. ++.++ ..+.+ ++.|+.+++.. .+...+
T Consensus 366 ~~~Qr~RWa~G~~qi~~~~--~pl~~~gl~~~qrl~y~~~~~~---~~~~~-~~~~~-~~~P~~~l~~~~~~~~~~~~~~ 438 (713)
T TIGR03030 366 HIGQRIRWAQGMMQIFRLD--NPLLKRGLSFPQRLCYLNAMLF---WFFPL-PRVIF-LTAPLAYLFFGLNIFVASALEI 438 (713)
T ss_pred HHHHHHHHhcChHHHHhhh--CccccCCCCHHHHHHHHHHHHH---HHHHH-HHHHH-HHHHHHHHHhCCcceeCCHHHH
Confidence 9999999999999998753 3344578999999987654332 11121 11222 23355443322 112223
Q ss_pred HHHHHHHHHHHHHH--hhccchhHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCceEEcccCCCccc
Q 044519 399 IAIYIPATITLLNA--VCTPRSFHLIVFW-ILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTKK 464 (534)
Q Consensus 399 ~~~~l~~~~~~~~~--~~~~~~~~~~~~~-~l~~~~~~~~~~~a~l~gl~~~~~~~~~~~T~K~~~~~~ 464 (534)
..+++|.++..... ....+ ...++| .+++.++++..+.+++.++++ .++.+|+||||++...+
T Consensus 439 ~~~~lp~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~F~VT~Kg~~~~~ 504 (713)
T TIGR03030 439 LAYALPHMLHSLLTNSYLFGR--VRWPFWSEVYETVLAVYLLPPVLVTLLN-PKKPKFNVTPKGELLDE 504 (713)
T ss_pred HHHHHHHHHHHHHHHHHHcCC--eecchHHHHHHHHHHHHHHHHHHHHHhC-cCCCCceecCCCccccc
Confidence 34455555433322 11111 112344 488888888888999999885 45678999999876543
No 3
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=1.2e-43 Score=371.08 Aligned_cols=242 Identities=21% Similarity=0.304 Sum_probs=203.5
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
+..|.|||+||+|||++.+++|++|+++|+||+.+++ +|+|+|+|+|.+ .+++..++ ..++++++.
T Consensus 72 ~~~p~vsViIP~yNE~~~i~~~l~sll~q~yp~~eIi-vVdDgs~D~t~~---------~~~~~~~~----~~~v~vv~~ 137 (444)
T PRK14583 72 KGHPLVSILVPCFNEGLNARETIHAALAQTYTNIEVI-AINDGSSDDTAQ---------VLDALLAE----DPRLRVIHL 137 (444)
T ss_pred CCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCCCeEEE-EEECCCCccHHH---------HHHHHHHh----CCCEEEEEe
Confidence 3579999999999999999999999999999975533 356668888776 66555443 356777755
Q ss_pred cCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhccc
Q 044519 168 KNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDY 247 (534)
Q Consensus 168 ~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~ 247 (534)
+ +++||++|+|.|++++ ++|+++++|||++++||+++++++.+.+||++++|++.....|. .++.++.|..++..
T Consensus 138 ~-~n~Gka~AlN~gl~~a---~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~~~~~-~~~~~~~~~~e~~~ 212 (444)
T PRK14583 138 A-HNQGKAIALRMGAAAA---RSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPRIRTR-STLIGRVQVGEFSS 212 (444)
T ss_pred C-CCCCHHHHHHHHHHhC---CCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccceecCC-CcchhhHHHHHHHH
Confidence 4 4456999999999998 99999999999999999999999999889999999999887665 46777777555554
Q ss_pred chhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHH
Q 044519 248 HFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQ 327 (534)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Q 327 (534)
.+...+......+.....+|+++++||++++++|||+++.++||.|++.|++++||++.|.|++.++++.|+|++++++|
T Consensus 213 ~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~~vGg~~~~~i~ED~dl~~rl~~~G~~i~~~p~a~~~~~~p~t~~~~~~Q 292 (444)
T PRK14583 213 IIGLIKRTQRVYGQVFTVSGVVAAFRRRALADVGYWSPDMITEDIDISWKLQLKHWSVFFEPRGLCWILMPETLRGLWKQ 292 (444)
T ss_pred HHHHHHHHHHHhCCceEecCceeEEEHHHHHHcCCCCCCcccccHHHHHHHHHcCCeEEEeeccEEeeeCCCCHHHHHHH
Confidence 44433333344555666789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccchhhHHhhhhhhhhh
Q 044519 328 QHRWSCGPSNLFSKMTREIIL 348 (534)
Q Consensus 328 r~RW~~G~~~~~~~~~~~~~~ 348 (534)
|.||++|..|++.++.+..+.
T Consensus 293 r~RW~~G~~~~~~~~~~~~~~ 313 (444)
T PRK14583 293 RLRWAQGGAEVFLKNMFKLWR 313 (444)
T ss_pred HHHHhCcHHHHHHHHHHHHhC
Confidence 999999999999988776654
No 4
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=1.8e-43 Score=368.88 Aligned_cols=243 Identities=23% Similarity=0.339 Sum_probs=203.9
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
++.|+|||+||+|||++.+++|++|+.+|+||+.+++| |+|+|+|+|.+ .+++..++ ..+++++++
T Consensus 51 ~~~p~vsViIp~yne~~~i~~~l~sl~~q~yp~~eiiV-vdD~s~d~t~~---------~l~~~~~~----~~~v~~i~~ 116 (420)
T PRK11204 51 KEYPGVSILVPCYNEGENVEETISHLLALRYPNYEVIA-INDGSSDNTGE---------ILDRLAAQ----IPRLRVIHL 116 (420)
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEE-EECCCCccHHH---------HHHHHHHh----CCcEEEEEc
Confidence 56799999999999999999999999999999755433 56668887776 66655443 456888854
Q ss_pred cCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhccc
Q 044519 168 KNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDY 247 (534)
Q Consensus 168 ~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~ 247 (534)
+ +++||++|+|.|++++ ++|+++++|||++++||+|+++++.+++||++++|+|.....|. .++.++.|..++..
T Consensus 117 ~-~n~Gka~aln~g~~~a---~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~~~~~~-~~~~~~~~~~~~~~ 191 (420)
T PRK11204 117 A-ENQGKANALNTGAAAA---RSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPRIRNR-STLLGRIQVGEFSS 191 (420)
T ss_pred C-CCCCHHHHHHHHHHHc---CCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCceeccc-hhHHHHHHHHHHHH
Confidence 4 4456999999999998 99999999999999999999999999889999999999887775 46667766555444
Q ss_pred chhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHH
Q 044519 248 HFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQ 327 (534)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Q 327 (534)
.+.......+..+.....+|+++++||++++++|||+++..+||.|++.|++++||++.|.|++.++++.|+|++++.+|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~vgg~~~~~~~ED~~l~~rl~~~G~~i~~~p~~~~~~~~p~t~~~~~~Q 271 (420)
T PRK11204 192 IIGLIKRAQRVYGRVFTVSGVITAFRKSALHEVGYWSTDMITEDIDISWKLQLRGWDIRYEPRALCWILMPETLKGLWKQ 271 (420)
T ss_pred hhhHHHHHHHHhCCceEecceeeeeeHHHHHHhCCCCCCcccchHHHHHHHHHcCCeEEeccccEEEeECcccHHHHHHH
Confidence 33333333344455566789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccchhhHHhhhhhhhhhc
Q 044519 328 QHRWSCGPSNLFSKMTREIILC 349 (534)
Q Consensus 328 r~RW~~G~~~~~~~~~~~~~~~ 349 (534)
|+||++|.+|.++++.+..++.
T Consensus 272 r~RW~~G~~~~l~~~~~~~~~~ 293 (420)
T PRK11204 272 RLRWAQGGAEVLLKNFRRLWRW 293 (420)
T ss_pred HHHHhcCHHHHHHHHHHHhcCc
Confidence 9999999999999887666653
No 5
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=2.6e-40 Score=344.90 Aligned_cols=241 Identities=15% Similarity=0.191 Sum_probs=188.3
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEc-CCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLD-DSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D-ds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
+..|+|||+||+|||++.+.+||+|+.+|+||+++++|+|+| +|+|+|.+ ++++..++ ..++.+..
T Consensus 46 ~~~P~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~---------il~~~~~~----~~~v~v~~ 112 (439)
T TIGR03111 46 GKLPDITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQ---------VFCRAQNE----FPGLSLRY 112 (439)
T ss_pred CCCCCEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHH---------HHHHHHHh----CCCeEEEE
Confidence 457999999999999999999999999999998876665555 58888876 66555443 34555543
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC----Cc----hhh
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNAD----EC----LMT 238 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~----~~----~~~ 238 (534)
. ++++||++|+|.|++.+ ++|||+++|+|++++||+++++++.|.+||++++++|........ .. +..
T Consensus 113 ~-~~~~Gka~AlN~gl~~s---~g~~v~~~DaD~~~~~d~L~~l~~~f~~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~ 188 (439)
T TIGR03111 113 M-NSDQGKAKALNAAIYNS---IGKYIIHIDSDGKLHKDAIKNMVTRFENNPDIHAMTGVILTDKELIEKTKGRFLKLIR 188 (439)
T ss_pred e-CCCCCHHHHHHHHHHHc---cCCEEEEECCCCCcChHHHHHHHHHHHhCCCeEEEEeEEecCchhhhhhcchhhhHhH
Confidence 3 34567999999999998 999999999999999999999999997799999999886542110 01 111
Q ss_pred HhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHH-hCCCEEEEeccCcccccC
Q 044519 239 RLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRAS-LKGWKFVFVGDLGVKNEL 317 (534)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~-~~G~ki~~~~~~~~~~~~ 317 (534)
+.+..++...+.......+........+|+++++||++++++|||++++++||+|++.+++ ..|+++.++|++.++++.
T Consensus 189 ~~~~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~vggf~~~~i~ED~~l~~rl~~~~g~kv~~~~~a~~~~~~ 268 (439)
T TIGR03111 189 RCEYFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETILKTQLYNSETVGEDTDMTFQIRELLDGKVYLCENAIFYVDP 268 (439)
T ss_pred HhHHHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHHHhCCCCCCCcCccHHHHHHHHHhcCCeEEECCCCEEEEEC
Confidence 1111121111111112223334455678999999999999999999999999999999997 469999999999999999
Q ss_pred CcCHHHHHHHHhhhccchhhHHhhhhhh
Q 044519 318 PSTFKAYRYQQHRWSCGPSNLFSKMTRE 345 (534)
Q Consensus 318 p~t~~~~~~Qr~RW~~G~~~~~~~~~~~ 345 (534)
|+|++++++||.||.+|.+|+++.+.+.
T Consensus 269 p~t~~~~~~QR~RW~rG~~qv~~~~~~~ 296 (439)
T TIGR03111 269 IDGLNKLYTQRQRWQRGELEVSHMFFES 296 (439)
T ss_pred CcCHHHHHHHHHHHhccHHHHHHHHHhh
Confidence 9999999999999999999999776543
No 6
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=2.8e-39 Score=346.80 Aligned_cols=262 Identities=18% Similarity=0.198 Sum_probs=206.8
Q ss_pred CCCCcEEEEEeccCchH-----HHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccE
Q 044519 88 KSYPMVLVQIPMYNEKE-----VYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNV 162 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~-----~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v 162 (534)
+..|+|+|+||+|||+. .++.+++|+.+|+|++ +++|+|+||++|+..... .++..++.+++++ .+.++
T Consensus 121 ~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~----e~~~~~~L~~~~~-~~~~i 194 (691)
T PRK05454 121 PPEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAA----EEAAWLELRAELG-GEGRI 194 (691)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHH----HHHHHHHHHHhcC-CCCcE
Confidence 56789999999999993 5888999999999974 567778888777766510 0123345556553 25689
Q ss_pred EEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHh
Q 044519 163 KYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQE 242 (534)
Q Consensus 163 ~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~ 242 (534)
.|.+|.++.+.|+||+|.+++.. ..++||++++|||+++++|++.++++.|++||++|+||+++...|.+ ++++++|+
T Consensus 195 ~yr~R~~n~~~KaGNl~~~~~~~-~~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQt~~~~~n~~-slfaR~qq 272 (691)
T PRK05454 195 FYRRRRRNVGRKAGNIADFCRRW-GGAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQTLPVAVGAD-TLFARLQQ 272 (691)
T ss_pred EEEECCcCCCccHHHHHHHHHhc-CCCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEeCCccCcCCC-CHHHHHHH
Confidence 99988888889999999999983 23789999999999999999999999998899999999999888875 89999886
Q ss_pred hhcccchhhhhhccc-ccCccccccCCcchhhHHHHHHhC---------CCCCCCccchHHHHHHHHhCCCEEEEecc-C
Q 044519 243 MSLDYHFSVEQEVGS-STCQFFGFNGTAGVWRIQAIEDAG---------GWKDRTTVEDMDLAVRASLKGWKFVFVGD-L 311 (534)
Q Consensus 243 ~~~~~~~~~~~~~~~-~~~~~~~~~G~~~~~Rr~~l~~~G---------g~~~~~~~ED~~l~~rl~~~G~ki~~~~~-~ 311 (534)
...+........... ..++...+.|+++++|++++.+++ +|+++.++||.+++.+++++||+++|+|+ .
T Consensus 273 f~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd~~ 352 (691)
T PRK05454 273 FATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPDLP 352 (691)
T ss_pred HHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCccc
Confidence 432221111111111 112334468999999999999865 56677899999999999999999999999 5
Q ss_pred cccccCCcCHHHHHHHHhhhccchhhHHhhhhhhhhhcCCCChhHHHHHHH
Q 044519 312 GVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIY 362 (534)
Q Consensus 312 ~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (534)
.++++.|+|++++.+||+||++|++|+++.. ..+++++.+|.+++.
T Consensus 353 ~~~ee~P~tl~~~~~qr~RW~~G~lQ~l~~l-----~~~gl~~~~R~~~l~ 398 (691)
T PRK05454 353 GSYEELPPNLLDELKRDRRWCQGNLQHLRLL-----LAKGLHPVSRLHFLT 398 (691)
T ss_pred cccccCCCCHHHHHHHHHHHHhchHHHHHHH-----HhcCCCHHHHHHHHH
Confidence 7899999999999999999999999987653 346788888887553
No 7
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=100.00 E-value=2.3e-41 Score=324.61 Aligned_cols=232 Identities=56% Similarity=0.954 Sum_probs=201.6
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR 170 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~ 170 (534)
|.|||+||+|||++.|.++|+|+++|+||.++++|+|+|||+|+|.+ ++++..+++...+.+++++.+.++
T Consensus 1 p~vSViIp~yNe~~~l~~~L~sl~~q~~~~~~~eIiVvD~s~D~t~~---------~~~~~~~~~~~~~~~i~~~~~~~~ 71 (232)
T cd06437 1 PMVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDDSTDETVR---------LAREIVEEYAAQGVNIKHVRRADR 71 (232)
T ss_pred CceEEEEecCCcHHHHHHHHHHHHhcCCCccceEEEEEECCCCcHHH---------HHHHHHHHHhhcCCceEEEECCCC
Confidence 67999999999999999999999999999887788788899999988 676666666556678888877777
Q ss_pred CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchh
Q 044519 171 NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFS 250 (534)
Q Consensus 171 ~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~ 250 (534)
+|+|++|+|.|++++ ++|||+++|+|++++|++|+++...+ ++|++++|+++....+.+.++..+.+.....+++.
T Consensus 72 ~G~k~~a~n~g~~~a---~~~~i~~~DaD~~~~~~~l~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
T cd06437 72 TGYKAGALAEGMKVA---KGEYVAIFDADFVPPPDFLQKTPPYF-ADPKLGFVQTRWGHINANYSLLTRVQAMSLDYHFT 147 (232)
T ss_pred CCCchHHHHHHHHhC---CCCEEEEEcCCCCCChHHHHHhhhhh-cCCCeEEEecceeeEcCCCchhhHhhhhhHHhhhh
Confidence 788999999999998 99999999999999999999977776 78999999999888887778888777665555554
Q ss_pred hhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHHHhh
Q 044519 251 VEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHR 330 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~R 330 (534)
..+......+....++|+++++||++++++|||++....||++++.|+..+||++.|+|++.++++.|.|++++++||.|
T Consensus 148 ~~~~~~~~~~~~~~~~g~~~~~rr~~~~~vgg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~v~~~~~~~~~~~~~q~~r 227 (232)
T cd06437 148 IEQVARSSTGLFFNFNGTAGVWRKECIEDAGGWNHDTLTEDLDLSYRAQLKGWKFVYLDDVVVPAELPASMSAYRSQQHR 227 (232)
T ss_pred HhHhhHhhcCCeEEeccchhhhhHHHHHHhCCCCCCcchhhHHHHHHHHHCCCeEEEeccceeeeeCCcCHHHHHHHHHH
Confidence 44433333344445689999999999999999999888999999999999999999999999999999999999999999
Q ss_pred hccch
Q 044519 331 WSCGP 335 (534)
Q Consensus 331 W~~G~ 335 (534)
|++|.
T Consensus 228 W~~g~ 232 (232)
T cd06437 228 WSKGP 232 (232)
T ss_pred hccCC
Confidence 99984
No 8
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=2e-37 Score=321.77 Aligned_cols=241 Identities=17% Similarity=0.166 Sum_probs=177.7
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHH-HcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAA-CGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl-~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
++.|+++|+||+|||+++|.++|+|+ .+++||+.++.| ++|+|+|+|.+ .+++.++++ ++++.+.
T Consensus 63 ~~~p~vaIlIPA~NE~~vI~~~l~s~L~~ldY~~~eIiV-v~d~ndd~T~~---------~v~~l~~~~----p~v~~vv 128 (504)
T PRK14716 63 VPEKRIAIFVPAWREADVIGRMLEHNLATLDYENYRIFV-GTYPNDPATLR---------EVDRLAARY----PRVHLVI 128 (504)
T ss_pred CCCCceEEEEeccCchhHHHHHHHHHHHcCCCCCeEEEE-EECCCChhHHH---------HHHHHHHHC----CCeEEEE
Confidence 56899999999999999999999996 568998654333 44678888777 666666554 4454332
Q ss_pred -ecCCCCCChhHHHHHHHhhh------ccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCc-hhh
Q 044519 167 -RKNRNGYKAGALKEGLEKQY------VKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADEC-LMT 238 (534)
Q Consensus 167 -r~~~~g~Ka~aln~gl~~a~------~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~-~~~ 238 (534)
..+.+.+|++|+|.|++++. ..++|+++++|||++++||+|+.+...+ ++.++||.+....+.+.+ +.+
T Consensus 129 ~~~~gp~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~---~~~~~VQ~pv~~~~~~~~~~~a 205 (504)
T PRK14716 129 VPHDGPTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYLL---PRHDFVQLPVFSLPRDWGEWVA 205 (504)
T ss_pred eCCCCCCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhc---CCCCEEecceeccCCchhHHHH
Confidence 22223469999999997641 1234999999999999999999876655 455678877665544333 323
Q ss_pred HhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHh-----CC-CCCCCccchHHHHHHHHhCCCEEEEeccCc
Q 044519 239 RLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDA-----GG-WKDRTTVEDMDLAVRASLKGWKFVFVGDLG 312 (534)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~-----Gg-~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~ 312 (534)
.....++...+......+...+...+.+|+++++||++++++ |+ |++++++||.|++.|+.++|+|++|+|++.
T Consensus 206 g~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l~~~~GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~ai 285 (504)
T PRK14716 206 GTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALERLAAERGGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRVRA 285 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHHHHhhcCCCCCCCCCcchHHHHHHHHHHCCCEEEEecccc
Confidence 222222222222222334556666667899999999999998 33 999999999999999999999999999985
Q ss_pred c---------------cccCCcCHHHHHHHHhhhccch-hhHHhhhhhh
Q 044519 313 V---------------KNELPSTFKAYRYQQHRWSCGP-SNLFSKMTRE 345 (534)
Q Consensus 313 ~---------------~~~~p~t~~~~~~Qr~RW~~G~-~~~~~~~~~~ 345 (534)
+ +++.|+|++++++||.||..|. +|.+++..++
T Consensus 286 ~~~~~~~~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~ 334 (504)
T PRK14716 286 DDTTDRPDRRGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWK 334 (504)
T ss_pred cccccccccccccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCC
Confidence 4 3678999999999999999996 6887765443
No 9
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1.1e-36 Score=320.16 Aligned_cols=236 Identities=31% Similarity=0.451 Sum_probs=201.2
Q ss_pred CCcEEEEEeccCchH-HHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 90 YPMVLVQIPMYNEKE-VYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 90 ~P~VsViIP~yne~~-~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
.|+|+|+||+|||++ ++++|++|+++||||+.++.+ |+||++|++.+ ++++..+++. .+++....+
T Consensus 53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~~eviv-v~d~~~d~~~~---------~~~~~~~~~~---~~~~~~~~~ 119 (439)
T COG1215 53 LPKVSVIIPAYNEEPEVLEETLESLLSQDYPRYEVIV-VDDGSTDETYE---------ILEELGAEYG---PNFRVIYPE 119 (439)
T ss_pred CCceEEEEecCCCchhhHHHHHHHHHhCCCCCceEEE-ECCCCChhHHH---------HHHHHHhhcC---cceEEEecc
Confidence 599999999999996 999999999999999855433 56668888887 7777666542 344444223
Q ss_pred CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC--CchhhHhHhhhcc
Q 044519 169 NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNAD--ECLMTRLQEMSLD 246 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~--~~~~~~~~~~~~~ 246 (534)
++++||++|+|.|++.+ ++|+|+++|||++++||+|.++++.| .+++++++++.....+.. .+++++.+..++.
T Consensus 120 ~~~~gK~~al~~~l~~~---~~d~V~~~DaD~~~~~d~l~~~~~~f-~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~ 195 (439)
T COG1215 120 KKNGGKAGALNNGLKRA---KGDVVVILDADTVPEPDALRELVSPF-EDPPVGAVVGTPRIRNRPDPSNLLGRIQAIEYL 195 (439)
T ss_pred ccCccchHHHHHHHhhc---CCCEEEEEcCCCCCChhHHHHHHhhh-cCCCeeEEeCCceeeecCChhhhcchhcchhhh
Confidence 56778999999999999 89999999999999999999999999 566666666666666654 6788888888877
Q ss_pred cchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHH
Q 044519 247 YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRY 326 (534)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~ 326 (534)
..+.......+..+....++|++.++||++++++|||++++++||.+++.+++.+|||+.|+|++.++++.|+|++++++
T Consensus 196 ~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~~~g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~~~~~~~~p~t~~~~~~ 275 (439)
T COG1215 196 SAFYFRLRAASKGGLISFLSGSSSAFRRSALEEVGGWLEDTITEDADLTLRLHLRGYRVVYVPEAIVWTEAPETLKELWR 275 (439)
T ss_pred hhHHHhhhhhhhcCCeEEEcceeeeEEHHHHHHhCCCCCCceeccHHHHHHHHHCCCeEEEeecceEeeeCcccHHHHHH
Confidence 77766666566666677789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccchhhHHhhh
Q 044519 327 QQHRWSCGPSNLFSKM 342 (534)
Q Consensus 327 Qr~RW~~G~~~~~~~~ 342 (534)
||.||++|.+|.+..+
T Consensus 276 Qr~RW~~g~~~~~~~~ 291 (439)
T COG1215 276 QRLRWARGGLQVLLLH 291 (439)
T ss_pred HHHHHHcccceeeehh
Confidence 9999999999988754
No 10
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=4e-37 Score=295.99 Aligned_cols=236 Identities=19% Similarity=0.241 Sum_probs=189.3
Q ss_pred EEEEEeccCch-HHHHHHHHHHHc----CCC-CCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 93 VLVQIPMYNEK-EVYKLSIGAACG----LSW-PSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 93 VsViIP~yne~-~~l~~~L~sl~~----q~y-p~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
|||+||+|||+ +.+.++|++.++ |+| |+ ++|+|+||++|++... ..++.+++.+++++. +.+++|++
T Consensus 1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~--~eI~vldD~~d~~~~~----~~~~~~~~l~~~~~~-~~~v~~~~ 73 (254)
T cd04191 1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLADH--FDFFILSDTRDPDIWL----AEEAAWLDLCEELGA-QGRIYYRR 73 (254)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCc--eEEEEECCCCChHHHH----HHHHHHHHHHHHhCC-CCcEEEEE
Confidence 69999999999 559999999875 777 54 5677899988886651 001234446667644 78999999
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcc
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLD 246 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~ 246 (534)
|.++.|.|++++|.++... ..++|||+++|||+.++||+|.+++++|.+||++++||+++...|.+ +++++++..+..
T Consensus 74 r~~~~g~Kag~l~~~~~~~-~~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq~~~~~~n~~-~~~~~~~~~~~~ 151 (254)
T cd04191 74 RRENTGRKAGNIADFCRRW-GSRYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQTAPKLIGAE-TLFARLQQFANR 151 (254)
T ss_pred cCCCCCccHHHHHHHHHHh-CCCCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEeCCceeECCC-CHHHHHHHHHHH
Confidence 9999999999999999861 12899999999999999999999999997799999999999998875 788998876533
Q ss_pred cchhhhhhcccc-cCccccccCCcchhhHHHHHHh---------CCCCCCCccchHHHHHHHHhCCCEEEEeccCc-ccc
Q 044519 247 YHFSVEQEVGSS-TCQFFGFNGTAGVWRIQAIEDA---------GGWKDRTTVEDMDLAVRASLKGWKFVFVGDLG-VKN 315 (534)
Q Consensus 247 ~~~~~~~~~~~~-~~~~~~~~G~~~~~Rr~~l~~~---------Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~-~~~ 315 (534)
......+..... .+....+.|+++++||++++++ |+|++++++||++++.+++++||+++|.|++. +++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~~~~~~ 231 (254)
T cd04191 152 LYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDLEGSYE 231 (254)
T ss_pred HHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCCcceEe
Confidence 222222221111 1233456799999999999884 34666789999999999999999999999987 588
Q ss_pred cCCcCHHHHHHHHhhhccchhh
Q 044519 316 ELPSTFKAYRYQQHRWSCGPSN 337 (534)
Q Consensus 316 ~~p~t~~~~~~Qr~RW~~G~~~ 337 (534)
+.|++++++++||.||++|.+|
T Consensus 232 ~~p~~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 232 ECPPTLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred ECCCCHHHHHHHHHHHHhhcCc
Confidence 8999999999999999999986
No 11
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=100.00 E-value=5.1e-37 Score=296.14 Aligned_cols=236 Identities=23% Similarity=0.335 Sum_probs=186.5
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEE-EcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQV-LDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V-~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
|.|||+||+|||++.+.++|+|+++|+||++.++|+| +|+|+|+|.+ ++++.... ...++.+.. ..
T Consensus 1 p~vsIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~---------i~~~~~~~---~~~~i~~~~-~~ 67 (241)
T cd06427 1 PVYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIA---------AARALRLP---SIFRVVVVP-PS 67 (241)
T ss_pred CeEEEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHH---------HHHHhccC---CCeeEEEec-CC
Confidence 6899999999999999999999999999976666655 4668888777 66544221 123444442 23
Q ss_pred CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcC-CcEEEEeeeeEeecCCCchhhHhHhhhcccc
Q 044519 170 RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLEN-KELGLVQARWKFVNADECLMTRLQEMSLDYH 248 (534)
Q Consensus 170 ~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~-~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~ 248 (534)
.+.||+.|+|.|++++ +||||+++|+|++++|+++.++++.+.++ +++++++++....+...++..+....++...
T Consensus 68 ~~~G~~~a~n~g~~~a---~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (241)
T cd06427 68 QPRTKPKACNYALAFA---RGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAPLNYYNARENWLTRMFALEYAAW 144 (241)
T ss_pred CCCchHHHHHHHHHhc---CCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCceEeeCCCccHHHHHHHHHHHHH
Confidence 4457999999999998 99999999999999999999999999654 8999999988777765566655543333222
Q ss_pred hhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHHH
Q 044519 249 FSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQ 328 (534)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr 328 (534)
+..........+....++|+++++||++++++|||++....||.|++.|+.++|+++.++|.. ++++.|+|++++.+||
T Consensus 145 ~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~vgg~~~~~~~eD~~l~~rl~~~G~r~~~~~~~-~~~~~~~~~~~~~~q~ 223 (241)
T cd06427 145 FDYLLPGLARLGLPIPLGGTSNHFRTDVLRELGGWDPFNVTEDADLGLRLARAGYRTGVLNST-TLEEANNALGNWIRQR 223 (241)
T ss_pred HHHHHHHHHhcCCeeecCCchHHhhHHHHHHcCCCCcccchhhHHHHHHHHHCCceEEEeccc-ccccCcHhHHHHHHHH
Confidence 222112122233334467999999999999999999888899999999999999999999885 4789999999999999
Q ss_pred hhhccchhhHHhhhh
Q 044519 329 HRWSCGPSNLFSKMT 343 (534)
Q Consensus 329 ~RW~~G~~~~~~~~~ 343 (534)
.||.+|.+|++..+.
T Consensus 224 ~Rw~~g~~~~~~~~~ 238 (241)
T cd06427 224 SRWIKGYMQTWLVHM 238 (241)
T ss_pred HHHhccHHHHHHHHh
Confidence 999999999987754
No 12
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=5.7e-35 Score=315.27 Aligned_cols=238 Identities=19% Similarity=0.191 Sum_probs=180.3
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHH-cCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAAC-GLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~-~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
++.|+|||+||+|||+.++.+++++++ +|+||+. +|+++++ ++|.|.+ .+++.++++ ++++.+
T Consensus 60 ~~~~~vsIlVPa~nE~~vi~~~i~~ll~~ldYP~~--eI~vi~~~nD~~T~~---------~~~~l~~~~----p~~~~v 124 (727)
T PRK11234 60 PDEKPLAIMVPAWNETGVIGNMAELAATTLDYENY--HIFVGTYPNDPATQA---------DVDAVCARF----PNVHKV 124 (727)
T ss_pred CCCCCEEEEEecCcchhhHHHHHHHHHHhCCCCCe--EEEEEecCCChhHHH---------HHHHHHHHC----CCcEEE
Confidence 567999999999999999999999987 7999984 4555544 4444455 777777765 333332
Q ss_pred E-ecCCCCCChhHHHHHHHhhh------ccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC-Cchh
Q 044519 166 T-RKNRNGYKAGALKEGLEKQY------VKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNAD-ECLM 237 (534)
Q Consensus 166 ~-r~~~~g~Ka~aln~gl~~a~------~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~-~~~~ 237 (534)
. ....++||++|+|.+++++. ..++|.++++|||++++||+|+ .++++ .++. ++||++....+.+ .++.
T Consensus 125 ~~~~~g~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~-~~~~l-~~~~-~~VQ~p~~p~~~~~~~~~ 201 (727)
T PRK11234 125 VCARPGPTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELR-LFNYL-VERK-DLIQIPVYPFEREWTHFT 201 (727)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHH-HHHhh-cCCC-CeEeecccCCCccHHHHH
Confidence 2 22234579999999999762 1245778999999999999998 66777 4555 8999986644432 2345
Q ss_pred hHhHhhhcccchhhhhhcccccCccccccCCcchh-hH--HHHHHhC---CCCCCCccchHHHHHHHHhCCCEEEEecc-
Q 044519 238 TRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVW-RI--QAIEDAG---GWKDRTTVEDMDLAVRASLKGWKFVFVGD- 310 (534)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~-Rr--~~l~~~G---g~~~~~~~ED~~l~~rl~~~G~ki~~~~~- 310 (534)
++.+..++...+..........++..+..|+++++ || +++.++| +|+.++++||+|++.+++.+||++.|+|.
T Consensus 202 ~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~~~ggg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~ 281 (727)
T PRK11234 202 SGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLEDGDGIAFDVQSLTEDYDIGFRLKEKGMREIFVRFP 281 (727)
T ss_pred HHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHHHhcCCCCcCCCcchHHHHHHHHHHHCCCEEEEcccc
Confidence 55555555544444444555565566788999999 77 5788888 69999999999999999999999999991
Q ss_pred ----------------------CcccccCCcCHHHHHHHHhhhccc-hhhHHhhhh
Q 044519 311 ----------------------LGVKNELPSTFKAYRYQQHRWSCG-PSNLFSKMT 343 (534)
Q Consensus 311 ----------------------~~~~~~~p~t~~~~~~Qr~RW~~G-~~~~~~~~~ 343 (534)
..++++.|.|+++.++||.||..| .+|.++...
T Consensus 282 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~~~~ 337 (727)
T PRK11234 282 VVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFKTLG 337 (727)
T ss_pred cccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHHHhC
Confidence 347788999999999999999999 578877655
No 13
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=100.00 E-value=1.2e-34 Score=296.48 Aligned_cols=231 Identities=18% Similarity=0.255 Sum_probs=178.1
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
+..|+|||+||+|||++.+++||+|+++|+||+.|++| ++|+|+|+|.+ ++++..++++ +.+++++..
T Consensus 38 ~~~p~VSViiP~~nee~~l~~~L~Sl~~q~Yp~~EIiv-vdd~s~D~t~~---------iv~~~~~~~p--~~~i~~v~~ 105 (373)
T TIGR03472 38 RAWPPVSVLKPLHGDEPELYENLASFCRQDYPGFQMLF-GVQDPDDPALA---------VVRRLRADFP--DADIDLVID 105 (373)
T ss_pred CCCCCeEEEEECCCCChhHHHHHHHHHhcCCCCeEEEE-EeCCCCCcHHH---------HHHHHHHhCC--CCceEEEEC
Confidence 34789999999999999999999999999999855433 55557776666 7777666543 345666644
Q ss_pred cCCCC--CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhc
Q 044519 168 KNRNG--YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSL 245 (534)
Q Consensus 168 ~~~~g--~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~ 245 (534)
+++.| +|.+|++.+++++ ++|+++++|||++++||+|++++..+ ++|++++|++.....+ ..++.++......
T Consensus 106 ~~~~G~~~K~~~l~~~~~~a---~ge~i~~~DaD~~~~p~~L~~lv~~~-~~~~v~~V~~~~~~~~-~~~~~~~l~~~~~ 180 (373)
T TIGR03472 106 ARRHGPNRKVSNLINMLPHA---RHDILVIADSDISVGPDYLRQVVAPL-ADPDVGLVTCLYRGRP-VPGFWSRLGAMGI 180 (373)
T ss_pred CCCCCCChHHHHHHHHHHhc---cCCEEEEECCCCCcChhHHHHHHHHh-cCCCcceEeccccCCC-CCCHHHHHHHHHh
Confidence 44433 5889999999998 99999999999999999999999999 7899999999754333 3456665543322
Q ss_pred ccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCC--CCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHH
Q 044519 246 DYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD--RTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKA 323 (534)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~ 323 (534)
+..+..........+......|+++++||++++++|||++ +.++||.+++.++.++|+++.+.|++..++..|+|+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~G~~~a~RR~~l~~iGGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~~v~~~~~~~s~~~ 260 (373)
T TIGR03472 181 NHNFLPSVMVARALGRARFCFGATMALRRATLEAIGGLAALAHHLADDYWLGELVRALGLRVVLAPVVVDTDVHETSFAT 260 (373)
T ss_pred hhhhhHHHHHHHhccCCccccChhhheeHHHHHHcCChHHhcccchHHHHHHHHHHHcCCeEEecchhhhcCCCccCHHH
Confidence 2222111111111122233579999999999999999986 56789999999999999999999999888888899999
Q ss_pred HHHHHhhhccch
Q 044519 324 YRYQQHRWSCGP 335 (534)
Q Consensus 324 ~~~Qr~RW~~G~ 335 (534)
+++||.||.++.
T Consensus 261 ~~~q~~RW~r~~ 272 (373)
T TIGR03472 261 LLAHELRWSRTI 272 (373)
T ss_pred HHHHHHHHHhhh
Confidence 999999998665
No 14
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=100.00 E-value=1.1e-35 Score=285.82 Aligned_cols=234 Identities=28% Similarity=0.505 Sum_probs=183.7
Q ss_pred EEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCC
Q 044519 94 LVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNG 172 (534)
Q Consensus 94 sViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g 172 (534)
||+||+|||+ +.++++|+|+.+|+||+.+++| |+|+|+|++.. +.+++.+++. +.+++++...++.|
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~~eiiV-vdd~s~D~t~~--------~~i~~~~~~~---~~~i~~i~~~~~~G 68 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPNFEVIV-IDNNTKDEALW--------KPVEAHCAQL---GERFRFFHVEPLPG 68 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCCcEEEE-EeCCCCchhHH--------HHHHHHHHHh---CCcEEEEEcCCCCC
Confidence 6999999998 7999999999999999866433 66679998874 3666655543 34677776665667
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhh
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVE 252 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 252 (534)
+|++|+|.|++++ ..++||++++|+|++++|++|.+++..+ +++++++|+++....+...+++.+.....+...+...
T Consensus 69 ~~~~a~n~g~~~a-~~~~d~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (236)
T cd06435 69 AKAGALNYALERT-APDAEIIAVIDADYQVEPDWLKRLVPIF-DDPRVGFVQAPQDYRDGEESLFKRMCYAEYKGFFDIG 146 (236)
T ss_pred CchHHHHHHHHhc-CCCCCEEEEEcCCCCcCHHHHHHHHHHh-cCCCeeEEecCccccCCCccHHHHHHhHHHHHHHHHH
Confidence 7999999999987 1237999999999999999999999998 6899999998765545444444433222211112211
Q ss_pred hhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHHHhhhc
Q 044519 253 QEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHRWS 332 (534)
Q Consensus 253 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~ 332 (534)
...... ......+|+++++||++++++|||++....||.+++.|+.++||++.++|++.++++.|.++.++.+||.||.
T Consensus 147 ~~~~~~-~~~~~~~g~~~~~rr~~~~~iGgf~~~~~~eD~dl~~r~~~~G~~~~~~~~~~~~~~~~~~~~~~~~q~~rw~ 225 (236)
T cd06435 147 MVSRNE-RNAIIQHGTMCLIRRSALDDVGGWDEWCITEDSELGLRMHEAGYIGVYVAQSYGHGLIPDTFEAFKKQRFRWA 225 (236)
T ss_pred hccccc-cCceEEecceEEEEHHHHHHhCCCCCccccchHHHHHHHHHCCcEEEEcchhhccCcCcccHHHHHHHHHHHh
Confidence 111111 1122357999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred cchhhHHhhh
Q 044519 333 CGPSNLFSKM 342 (534)
Q Consensus 333 ~G~~~~~~~~ 342 (534)
.|.+|.+++|
T Consensus 226 ~g~~~~~~~~ 235 (236)
T cd06435 226 YGAVQILKKH 235 (236)
T ss_pred cchhhhhhcc
Confidence 9999998876
No 15
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=2.7e-33 Score=298.12 Aligned_cols=292 Identities=17% Similarity=0.167 Sum_probs=204.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhhhhhhchhhhhhcCCCCcEEEEEeccCchHHHHHHHHHHH
Q 044519 35 LLHLAIILCSVMSLMLFIERVYMAIVILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQIPMYNEKEVYKLSIGAAC 114 (534)
Q Consensus 35 ~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~VsViIP~yne~~~l~~~L~sl~ 114 (534)
.+..+.....++.++..++.+++-.. .|.+..+|+...+.+..+..++....++.|++||+||+|||++++.+++++++
T Consensus 16 ~~~~~~~~~~~~~~i~~~ddl~~d~~-yw~r~~~r~~~~~~~~~~~~~~~l~~~~~~~vsIlVPa~nE~~VI~~~v~~ll 94 (703)
T PRK15489 16 VLETAAVATALVILISSLDDLFIDAW-YWVRELYRWLTRERRYRPLTAEQLRERDEQPLAIMVPAWKEYDVIAKMIENML 94 (703)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHH-HHHHHHHHhhhccccCCCCChHHhcccCCCceEEEEeCCCcHHHHHHHHHHHH
Confidence 34444444444445555666666643 33333333322222222333332233678999999999999999999999985
Q ss_pred -cCCCCCCceEEEE-EcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC-CCCCChhHHHHHHHhhhc----
Q 044519 115 -GLSWPSDRLIVQV-LDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN-RNGYKAGALKEGLEKQYV---- 187 (534)
Q Consensus 115 -~q~yp~~~~~I~V-~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~-~~g~Ka~aln~gl~~a~~---- 187 (534)
+++||+.+ |+| ++.++++|.+ .+++...++ ++++.++.++ .+.||+.|+|.|++.+..
T Consensus 95 ~~ldYp~~~--I~v~~~~nD~~T~~---------~~~~~~~~~----p~~~~v~~~~~gp~gKa~ALN~~l~~~~~~e~~ 159 (703)
T PRK15489 95 ATLDYRRYV--IFVGTYPNDAETIT---------EVERMRRRY----KRLVRVEVPHDGPTCKADCLNWIIQAIFRYEAG 159 (703)
T ss_pred hcCCCCCeE--EEEEecCCCccHHH---------HHHHHhccC----CcEEEEEcCCCCCCCHHHHHHHHHHHHHhhhhh
Confidence 88999754 444 3222234544 555554433 4555554433 335699999999987511
Q ss_pred cC--CcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeE-eecCCCchhhHhHhhhcccchhhhhhcccccCcccc
Q 044519 188 KD--CQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWK-FVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFG 264 (534)
Q Consensus 188 ~~--~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~-~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (534)
.+ .+.+++.|||++++|+.|+.+ +++..++ +++|++.. ..|...+|+++.+..++...+......+...++..+
T Consensus 160 ~~~~fa~vvi~DAEd~~~P~~L~~~-~~~~~~~--~~iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ip 236 (703)
T PRK15489 160 HGIEFAGVILHDSEDVLHPLELKYF-NYLLPRK--DLVQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVP 236 (703)
T ss_pred ccCccceEEEEcCCCCCChhHHHHH-HhhcCCc--ceeeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCcee
Confidence 12 344999999999999999877 5553444 57888644 445667899999988888877766666666666677
Q ss_pred ccCCcchhhHHHHHHh---CC---CCCCCccchHHHHHHHHhCCCEEEEec-----------------------cCcccc
Q 044519 265 FNGTAGVWRIQAIEDA---GG---WKDRTTVEDMDLAVRASLKGWKFVFVG-----------------------DLGVKN 315 (534)
Q Consensus 265 ~~G~~~~~Rr~~l~~~---Gg---~~~~~~~ED~~l~~rl~~~G~ki~~~~-----------------------~~~~~~ 315 (534)
.+|++++|||++++++ || |+.++++||.|++.|++++|++..|+- ...+++
T Consensus 237 l~Gv~~~frr~aL~~l~~~gg~~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre 316 (703)
T PRK15489 237 SAGVGTCFSRRALLALMKERGNQPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVRE 316 (703)
T ss_pred ccCcceeeeHHHHHHHHHhcCCCCCCCCCchHhHHHHHHHHHCCCceEEEEEeccccccccccccccccccccCceeehh
Confidence 8999999999999877 54 666788999999999999999999921 244678
Q ss_pred cCCcCHHHHHHHHhhhccchh-hHHhhhhhh
Q 044519 316 ELPSTFKAYRYQQHRWSCGPS-NLFSKMTRE 345 (534)
Q Consensus 316 ~~p~t~~~~~~Qr~RW~~G~~-~~~~~~~~~ 345 (534)
+.|.|+++.++||.||..|.. |.+++..|.
T Consensus 317 ~fP~~~~a~~rQk~RW~~Gi~~q~~~~~gw~ 347 (703)
T PRK15489 317 YFPDTFRTAYRQKARWVLGIAFQGWEQMGWR 347 (703)
T ss_pred hCcHHHHHHHHHHHHHHhHHHHhhHHHhCCC
Confidence 889999999999999999999 887776554
No 16
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=100.00 E-value=4.5e-34 Score=274.07 Aligned_cols=230 Identities=32% Similarity=0.478 Sum_probs=180.1
Q ss_pred CcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 91 PMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 91 P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
|+|||+||+|||+ +.+++||+|+++|+||+++++|+|+|| |+|++.+ ++++...+ .+++++.++
T Consensus 1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~---------~~~~~~~~-----~~~~~~~~~ 66 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRA---------LAAELGVE-----YGYRYLTRP 66 (234)
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHH---------HHHHhhcc-----cCceEEEeC
Confidence 6899999999987 789999999999999985445555555 6666655 66655332 255666677
Q ss_pred CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCc-hhhHhHhhhccc
Q 044519 169 NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADEC-LMTRLQEMSLDY 247 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~-~~~~~~~~~~~~ 247 (534)
.+.|+|++++|.|++++ ++||++++|+|+.++|++|++++..+.++++++++++.....+.+.. +..+........
T Consensus 67 ~~~~~~~~~~n~~~~~a---~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (234)
T cd06421 67 DNRHAKAGNLNNALAHT---TGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLADGAPNEQEL 143 (234)
T ss_pred CCCCCcHHHHHHHHHhC---CCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchhHHHHHHHHHHH
Confidence 77788999999999998 99999999999999999999999999666999999998776655432 112111111011
Q ss_pred chhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHH
Q 044519 248 HFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQ 327 (534)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Q 327 (534)
......... .......++|+++++||++++++|||++....||.+++.|+.++|+++.+.|++.++++.|.+++++.+|
T Consensus 144 ~~~~~~~~~-~~~~~~~~~g~~~~~r~~~~~~ig~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~~~~~~~~~~~~~~~~q 222 (234)
T cd06421 144 FYGVIQPGR-DRWGAAFCCGSGAVVRREALDEIGGFPTDSVTEDLATSLRLHAKGWRSVYVPEPLAAGLAPETLAAYIKQ 222 (234)
T ss_pred HHHHHHHHH-hhcCCceecCceeeEeHHHHHHhCCCCccceeccHHHHHHHHHcCceEEEecCccccccCCccHHHHHHH
Confidence 111111111 1122334579999999999999999998889999999999999999999999999999999999999999
Q ss_pred HhhhccchhhH
Q 044519 328 QHRWSCGPSNL 338 (534)
Q Consensus 328 r~RW~~G~~~~ 338 (534)
+.||.+|.++.
T Consensus 223 ~~rw~~~~~~~ 233 (234)
T cd06421 223 RLRWARGMLQI 233 (234)
T ss_pred HHHHhcCCeee
Confidence 99999998764
No 17
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=100.00 E-value=1.8e-35 Score=282.85 Aligned_cols=225 Identities=30% Similarity=0.431 Sum_probs=154.1
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
|+|+|+||+|||++.+.++|+|+++|+||+ ++|+|+|| ++|++.+ .+++.+++++ +.+++++.+++
T Consensus 1 P~v~Vvip~~~~~~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~---------~~~~~~~~~~--~~~v~vi~~~~ 67 (228)
T PF13641_consen 1 PRVSVVIPAYNEDDVLRRCLESLLAQDYPR--LEVVVVDDGSDDETAE---------ILRALAARYP--RVRVRVIRRPR 67 (228)
T ss_dssp --EEEE--BSS-HHHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCT---------THHHHHHTTG--G-GEEEEE---
T ss_pred CEEEEEEEecCCHHHHHHHHHHHHcCCCCC--eEEEEEECCCChHHHH---------HHHHHHHHcC--CCceEEeecCC
Confidence 789999999999999999999999999976 44555554 6666555 6666666654 33567776554
Q ss_pred CCC--CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhccc
Q 044519 170 RNG--YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDY 247 (534)
Q Consensus 170 ~~g--~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~ 247 (534)
+.| +|++|+|.|++++ ++|+++++|+|++++|++|.++++.+ ++|++++|++.....+ +.++.+..+......
T Consensus 68 ~~g~~~k~~a~n~~~~~~---~~d~i~~lD~D~~~~p~~l~~~~~~~-~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~ 142 (228)
T PF13641_consen 68 NPGPGGKARALNEALAAA---RGDYILFLDDDTVLDPDWLERLLAAF-ADPGVGAVGGPVFPDN-DRNWLTRLQDLFFAR 142 (228)
T ss_dssp -HHHHHHHHHHHHHHHH------SEEEEE-SSEEE-CHHHHHHHHHH-HBSS--EEEEEEEETT-CCCEEEE-TT--S-E
T ss_pred CCCcchHHHHHHHHHHhc---CCCEEEEECCCcEECHHHHHHHHHHH-HhCCCCeEeeeEeecC-CCCHHHHHHHHHHhh
Confidence 443 6999999999998 89999999999999999999999999 8999999999986655 556666655433322
Q ss_pred chhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHH
Q 044519 248 HFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQ 327 (534)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Q 327 (534)
.+.......... ...+++|+++++||++++++|||++...+||.+++.|+.++||++.++|++.++++.|.|++++.+|
T Consensus 143 ~~~~~~~~~~~~-~~~~~~G~~~~~rr~~~~~~g~fd~~~~~eD~~l~~r~~~~G~~~~~~~~~~v~~~~~~~~~~~~~q 221 (228)
T PF13641_consen 143 WHLRFRSGRRAL-GVAFLSGSGMLFRRSALEEVGGFDPFILGEDFDLCLRLRAAGWRIVYAPDALVYHEEPSSLKAFFKQ 221 (228)
T ss_dssp ETTTS-TT-B-----S-B--TEEEEEHHHHHHH-S--SSSSSHHHHHHHHHHHTT--EEEEEEEEEEE--SSSTHHHHHH
T ss_pred hhhhhhhhhccc-ceeeccCcEEEEEHHHHHHhCCCCCCCcccHHHHHHHHHHCCCcEEEECCcEEEEeCCCCHHHHHHH
Confidence 222222222222 3455689999999999999999999778999999999999999999999999999999999999999
Q ss_pred Hhhhccc
Q 044519 328 QHRWSCG 334 (534)
Q Consensus 328 r~RW~~G 334 (534)
|.||.+|
T Consensus 222 ~~RW~~g 228 (228)
T PF13641_consen 222 RFRWSRG 228 (228)
T ss_dssp HHHHH--
T ss_pred HhccCcC
Confidence 9999987
No 18
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=4.2e-31 Score=277.97 Aligned_cols=312 Identities=21% Similarity=0.268 Sum_probs=215.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhhhh-hhchhhhhhcCCCCcEEEEEec---cCch-HHHHHHHHHHHcCCCCC
Q 044519 46 MSLMLFIERVYMAIVILYVKVLRKKRYTEYKL-EEMKEDLELNKSYPMVLVQIPM---YNEK-EVYKLSIGAACGLSWPS 120 (534)
Q Consensus 46 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~VsViIP~---yne~-~~l~~~L~sl~~q~yp~ 120 (534)
.+++.+++.+...+..+.-...+..|-++... +.+. .....+++|.|+|.|++ ++|+ -....|+-|+++.|||.
T Consensus 56 ~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r~~~~~~L~-~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~ 134 (734)
T PLN02893 56 ITLLLLLADIVLAFMWATTQAFRMCPVHRRVFIEHLE-HYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPT 134 (734)
T ss_pred HHHHHHHHHHHHHHHHHHccCccccccccccCHHHHh-hhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCc
Confidence 35566666666665544444444444333211 1111 11112579999999999 7887 57789999999999999
Q ss_pred CceEEEEEcCC-Chhhh---------------------------------------c-----hhhhhhhHHHHHHHH---
Q 044519 121 DRLIVQVLDDS-TNEVL---------------------------------------R-----TDFFQYTQKLVELEC--- 152 (534)
Q Consensus 121 ~~~~I~V~Dds-~D~t~---------------------------------------~-----~~~~~~~~~~v~~~~--- 152 (534)
+++-++|.||+ +.-|. + ..+||.....++...
T Consensus 135 ~kls~YvSDDGgs~lt~~al~Eaa~FA~~WvPFCrk~~ie~R~P~~YF~~~~~~~~~e~~~~k~~Yee~k~ri~~~~~~~ 214 (734)
T PLN02893 135 EKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERCPEAYFSSNSHSWSPETEQIKMMYESMKVRVENVVERG 214 (734)
T ss_pred cceEEEEecCCccHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhccCCCccchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999884 21111 0 023333333333221
Q ss_pred ---HHH-------------hh--------------------------cCccEEEEEecCCC----CCChhHHHHHHHhhh
Q 044519 153 ---LKW-------------IE--------------------------KGVNVKYETRKNRN----GYKAGALKEGLEKQY 186 (534)
Q Consensus 153 ---~~~-------------~~--------------------------~~~~v~~~~r~~~~----g~Ka~aln~gl~~a~ 186 (534)
+++ .. .-+++.|++|+++. +.||||+|.+++.+.
T Consensus 215 ~~~~~~~~~~~~~~~f~~w~~~~~~~dH~~ivqV~l~~~~~~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~ 294 (734)
T PLN02893 215 KVSTDYITCDQEREAFSRWTDKFTRQDHPTVIQVLLESGKDKDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSA 294 (734)
T ss_pred cCchhhhhhcccccccccCcCCCCCCCCCceeeeeccCCCccchhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhc
Confidence 111 00 11456788888774 689999999999642
Q ss_pred c-cCCcEEEEecCCCCC-CHHHHHHHHHHHhcCC----cEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccC
Q 044519 187 V-KDCQFVVIFDADFQP-DEDFLWRTIPYLLENK----ELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTC 260 (534)
Q Consensus 187 ~-~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~----~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (534)
. .++++|+.+|||+.+ +|+++++++.+| .|| +++.||.++.+.|-+.+-.-. -+....+...+. +.+..
T Consensus 295 ~~TngpfIl~lDcD~y~n~p~~l~~amcff-~Dp~~~~~vafVQfPQ~F~~i~~~D~y~---~~~~vff~~~~~-glDG~ 369 (734)
T PLN02893 295 TMTNAPIILTLDCDMYSNDPQTPLRALCYL-LDPSMDPKLGYVQFPQIFHGINKNDIYA---GELKRLFQINMI-GMDGL 369 (734)
T ss_pred ccCCCCEEEEecCCcCCCchhHHHHHHHHh-cCCCcCCceEEEeCcccccCCCcCCCCc---chhHHHHHHHhh-ccccc
Confidence 2 489999999999996 799999999999 565 799999999988765441100 111223444444 33334
Q ss_pred ccccccCCcchhhHHHHHH------------------------------------------------hCCCCCCCccchH
Q 044519 261 QFFGFNGTAGVWRIQAIED------------------------------------------------AGGWKDRTTVEDM 292 (534)
Q Consensus 261 ~~~~~~G~~~~~Rr~~l~~------------------------------------------------~Gg~~~~~~~ED~ 292 (534)
+...+.|+++++||+++.. .+||..++++||.
T Consensus 370 ~gp~y~GTGc~~RR~al~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~ 449 (734)
T PLN02893 370 AGPNYVGTGCFFRRRVFYGGPSSLILPEIPELNPDHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDY 449 (734)
T ss_pred CCceeeccceEEEHHHhcCCCccccchhhhhcccccccccccchHHHHHHhhhccccccccCCccccccceEeccccccH
Confidence 4456789999999999930 1367778899999
Q ss_pred HHHHHHHhCCCEEEEec--cCcccccCCcCHHHHHHHHhhhccchhhHHhhhhhhhh-hcCCCChhHHHHHHHH
Q 044519 293 DLAVRASLKGWKFVFVG--DLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREII-LCERVSVWKRLYLIYA 363 (534)
Q Consensus 293 ~l~~rl~~~G~ki~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 363 (534)
+++++++.+|||.+|++ .....+..|+|+.++..||.||++|.+|++......++ ..+++++.+++.++..
T Consensus 450 ~Tg~~lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~ 523 (734)
T PLN02893 450 YTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHY 523 (734)
T ss_pred HHHHHHHhcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHH
Confidence 99999999999999985 34568999999999999999999999999765333443 3478999999987753
No 19
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=100.00 E-value=6.6e-34 Score=265.48 Aligned_cols=191 Identities=19% Similarity=0.280 Sum_probs=163.4
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR 170 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~ 170 (534)
|.|||+||+|||++.+.++|+|+.+|+||+.+++| |+|+|+|+|.+ ++++..++++ ..+++++..+++
T Consensus 1 p~vsviip~~n~~~~l~~~L~sl~~q~~~~~eiiv-Vdd~s~d~t~~---------~~~~~~~~~~--~~~~~~~~~~~~ 68 (196)
T cd02520 1 PGVSILKPLCGVDPNLYENLESFFQQDYPKYEILF-CVQDEDDPAIP---------VVRKLIAKYP--NVDARLLIGGEK 68 (196)
T ss_pred CCeEEEEecCCCCccHHHHHHHHHhccCCCeEEEE-EeCCCcchHHH---------HHHHHHHHCC--CCcEEEEecCCc
Confidence 67999999999999999999999999999855433 66778888877 7776665542 234555544434
Q ss_pred CC--CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccc
Q 044519 171 NG--YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYH 248 (534)
Q Consensus 171 ~g--~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~ 248 (534)
.| +|++++|.|++.+ ++||++++|+|+.++|++|++++..+ .+|++++|++.
T Consensus 69 ~g~~~~~~~~n~g~~~a---~~d~i~~~D~D~~~~~~~l~~l~~~~-~~~~~~~v~~~---------------------- 122 (196)
T cd02520 69 VGINPKVNNLIKGYEEA---RYDILVISDSDISVPPDYLRRMVAPL-MDPGVGLVTCL---------------------- 122 (196)
T ss_pred CCCCHhHHHHHHHHHhC---CCCEEEEECCCceEChhHHHHHHHHh-hCCCCCeEEee----------------------
Confidence 33 5788999999998 99999999999999999999999998 68899999876
Q ss_pred hhhhhhcccccCccccccCCcchhhHHHHHHhCCCCC--CCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHH
Q 044519 249 FSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD--RTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRY 326 (534)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~ 326 (534)
...|+++++||++++++|||+. ....||.+++.|+.++|+++.+.|++.++++.|.+++++++
T Consensus 123 ---------------~~~g~~~~~r~~~~~~~ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~~~~~~~~~~~~~~~~~ 187 (196)
T cd02520 123 ---------------CAFGKSMALRREVLDAIGGFEAFADYLAEDYFLGKLIWRLGYRVVLSPYVVMQPLGSTSLASFWR 187 (196)
T ss_pred ---------------cccCceeeeEHHHHHhccChHHHhHHHHHHHHHHHHHHHcCCeEEEcchheeccCCcccHHHHHH
Confidence 3468999999999999999986 24589999999999999999999999999999999999999
Q ss_pred HHhhhccc
Q 044519 327 QQHRWSCG 334 (534)
Q Consensus 327 Qr~RW~~G 334 (534)
||.||.+.
T Consensus 188 q~~rw~~~ 195 (196)
T cd02520 188 RQLRWSRT 195 (196)
T ss_pred HHHHHhcc
Confidence 99999875
No 20
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=100.00 E-value=1.7e-33 Score=271.64 Aligned_cols=204 Identities=21% Similarity=0.237 Sum_probs=169.3
Q ss_pred EEEeccCch-HHHHHHHHHHHcCCCC--------CCceEEEEE-cCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEE
Q 044519 95 VQIPMYNEK-EVYKLSIGAACGLSWP--------SDRLIVQVL-DDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKY 164 (534)
Q Consensus 95 ViIP~yne~-~~l~~~L~sl~~q~yp--------~~~~~I~V~-Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~ 164 (534)
|+||+|||+ ++|+++|+|+++|+|| .++++|+|+ |+|+| .
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d---~--------------------------- 50 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK---K--------------------------- 50 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc---c---------------------------
Confidence 689999997 8999999999999999 666777664 55776 1
Q ss_pred EEecCCCCCChh-------HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchh
Q 044519 165 ETRKNRNGYKAG-------ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLM 237 (534)
Q Consensus 165 ~~r~~~~g~Ka~-------aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~ 237 (534)
+ .||.. ++|.++..+ ++|+++++|||++++||+|++++.+|.+||++++|+|.....|...+++
T Consensus 51 -----~-~gk~~~~~~~~~~~~~~~~~a---~~e~i~~~DaD~~~~~~~l~~l~~~~~~~p~vg~v~g~~~~~~~~~~~~ 121 (244)
T cd04190 51 -----N-RGKRDSQLWFFNYFCRVLFPD---DPEFILLVDADTKFDPDSIVQLYKAMDKDPEIGGVCGEIHPMGKKQGPL 121 (244)
T ss_pred -----c-CcchHHHHHHHHHHHHHhhcC---CCCEEEEECCCCcCCHhHHHHHHHHHHhCCCEEEEEeeeEEcCCcchhH
Confidence 0 11332 456777776 9999999999999999999999999977999999999998888777888
Q ss_pred hHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCC--------------------CCccchHHHHHH
Q 044519 238 TRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD--------------------RTTVEDMDLAVR 297 (534)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~--------------------~~~~ED~~l~~r 297 (534)
+..|..++...........+..+...+.+|+++++|++++++.|++.. ..++||.+++.+
T Consensus 122 ~~~q~~ey~~~~~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~~l~~~ 201 (244)
T cd04190 122 VMYQVFEYAISHWLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDRILCTL 201 (244)
T ss_pred HHhHheehhhhhhhcccHHHcCCceEECCCceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhHhcccceeHH
Confidence 888877655433333333455566677899999999999999976543 236899999999
Q ss_pred HHhCCCEEEE--eccCcccccCCcCHHHHHHHHhhhccchhh
Q 044519 298 ASLKGWKFVF--VGDLGVKNELPSTFKAYRYQQHRWSCGPSN 337 (534)
Q Consensus 298 l~~~G~ki~~--~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~~ 337 (534)
+.++||++.+ .|++.++++.|+|++++++||.||.+|.+.
T Consensus 202 l~~~G~~~~~~~~~~a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 202 LLKAGPKRKYLYVPGAVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred HhccCCccEEEEecccEEEEECCCCHHHHHHHhHhhhccccc
Confidence 9999999999 999999999999999999999999999863
No 21
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.97 E-value=3.4e-31 Score=254.39 Aligned_cols=222 Identities=19% Similarity=0.202 Sum_probs=172.6
Q ss_pred cEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC
Q 044519 92 MVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR 170 (534)
Q Consensus 92 ~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~ 170 (534)
.|||+||+|||+ +.+.+||+|+.+|+ | .++ |+|+|+|+|++.+ .+++. .+...+.++ . .+
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~-~-~ei-ivvdd~s~d~~~~---------~l~~~-----~~~~~~~v~-~-~~ 61 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQK-P-LEI-IVVTDGDDEPYLS---------ILSQT-----VKYGGIFVI-T-VP 61 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCC-C-CEE-EEEeCCCChHHHH---------HHHhh-----ccCCcEEEE-e-cC
Confidence 489999999999 99999999999998 4 444 3366778887766 44221 123445555 3 34
Q ss_pred CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchh
Q 044519 171 NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFS 250 (534)
Q Consensus 171 ~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~ 250 (534)
++||++|+|.|++.+ ++|+++++|+|+.++|++|++++..+. ++++++|++.....+.+.+.........+.....
T Consensus 62 ~~g~~~a~n~g~~~a---~~d~v~~lD~D~~~~~~~l~~l~~~~~-~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (235)
T cd06434 62 HPGKRRALAEGIRHV---TTDIVVLLDSDTVWPPNALPEMLKPFE-DPKVGGVGTNQRILRPRDSKWSFLAAEYLERRNE 137 (235)
T ss_pred CCChHHHHHHHHHHh---CCCEEEEECCCceeChhHHHHHHHhcc-CCCEeEEcCceEeecCcccHHHHHHHHHHHHHHH
Confidence 566999999999998 999999999999999999999999995 9999999999887776445544443322222222
Q ss_pred hhhhcccccCccccccCCcchhhHHHHHHhCCCCC----------CCccchHHHHHHHHhCCCEEEEeccCcccccCCcC
Q 044519 251 VEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD----------RTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPST 320 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~----------~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t 320 (534)
.........+...+++|+++++||+++++.++..+ ...+||.+++.++.++||++.|.|++.++++.|.+
T Consensus 138 ~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~~~~~~~~~~~ 217 (235)
T cd06434 138 EIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFLEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYTSEAYTETPEN 217 (235)
T ss_pred HHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhHHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEEecCCeEEEEcchh
Confidence 22222333444556789999999999998753322 25689999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccchh
Q 044519 321 FKAYRYQQHRWSCGPS 336 (534)
Q Consensus 321 ~~~~~~Qr~RW~~G~~ 336 (534)
++++.+||.||.+|..
T Consensus 218 ~~~~~~q~~Rw~~~~~ 233 (235)
T cd06434 218 YKKFLKQQLRWSRSNW 233 (235)
T ss_pred HHHHHHHhhhhhhccc
Confidence 9999999999999975
No 22
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.97 E-value=5.7e-29 Score=255.55 Aligned_cols=228 Identities=18% Similarity=0.198 Sum_probs=163.7
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
+..|+|||+||+|||++.+.+||+|+++|+||+. .+|+ |+|+|+|+|.+ ++++..++++. ..++++++
T Consensus 37 ~~~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~-~eIIVVDd~StD~T~~---------i~~~~~~~~~~-~~~i~vi~ 105 (384)
T TIGR03469 37 EAWPAVVAVVPARNEADVIGECVTSLLEQDYPGK-LHVILVDDHSTDGTAD---------IARAAARAYGR-GDRLTVVS 105 (384)
T ss_pred CCCCCEEEEEecCCcHhHHHHHHHHHHhCCCCCc-eEEEEEeCCCCCcHHH---------HHHHHHHhcCC-CCcEEEec
Confidence 5689999999999999999999999999999953 3444 55568888877 77766554321 23677775
Q ss_pred ecC---CCCCChhHHHHHHHhhhccC-----CcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhh
Q 044519 167 RKN---RNGYKAGALKEGLEKQYVKD-----CQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMT 238 (534)
Q Consensus 167 r~~---~~g~Ka~aln~gl~~a~~~~-----~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~ 238 (534)
.++ ..+||+.|+|.|+++| + +|+++++|+|+.++||+++++++.+ ++++++++++...... .++..
T Consensus 106 ~~~~~~g~~Gk~~A~n~g~~~A---~~~~~~gd~llflDaD~~~~p~~l~~lv~~~-~~~~~~~vs~~~~~~~--~~~~~ 179 (384)
T TIGR03469 106 GQPLPPGWSGKLWAVSQGIAAA---RTLAPPADYLLLTDADIAHGPDNLARLVARA-RAEGLDLVSLMVRLRC--ESFWE 179 (384)
T ss_pred CCCCCCCCcchHHHHHHHHHHH---hccCCCCCEEEEECCCCCCChhHHHHHHHHH-HhCCCCEEEecccccC--CCHHH
Confidence 332 2347999999999998 6 9999999999999999999999998 4556777777655433 22222
Q ss_pred HhHhhhcccc----hhhhhhcccccCccccccCCcchhhHHHHHHhCCCCC--CCccchHHHHHHHHhCCCEEEEeccCc
Q 044519 239 RLQEMSLDYH----FSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD--RTTVEDMDLAVRASLKGWKFVFVGDLG 312 (534)
Q Consensus 239 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~ 312 (534)
+......... +... .............|+++++||++++++|||++ ....||.+++.++.++|+++.+.+...
T Consensus 180 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~G~~~lirr~~~~~vGGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~~ 258 (384)
T TIGR03469 180 KLLIPAFVFFFQKLYPFR-WVNDPRRRTAAAAGGCILIRREALERIGGIAAIRGALIDDCTLAAAVKRSGGRIWLGLAAR 258 (384)
T ss_pred HHHHHHHHHHHHHhcchh-hhcCCCccceeecceEEEEEHHHHHHcCCHHHHhhCcccHHHHHHHHHHcCCcEEEEecCc
Confidence 2110000000 0000 01111112233479999999999999999986 457899999999999999999987655
Q ss_pred ccc-cCCcCHHHHHHHHhhhcc
Q 044519 313 VKN-ELPSTFKAYRYQQHRWSC 333 (534)
Q Consensus 313 ~~~-~~p~t~~~~~~Qr~RW~~ 333 (534)
... ...+++++.++|+.||..
T Consensus 259 ~~s~r~~~~~~~~~~~~~r~~~ 280 (384)
T TIGR03469 259 TRSLRPYDGLGEIWRMIARTAY 280 (384)
T ss_pred eEEEEecCCHHHHHHHHHHhHH
Confidence 433 455688999999998733
No 23
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.97 E-value=7.8e-30 Score=243.56 Aligned_cols=222 Identities=19% Similarity=0.314 Sum_probs=167.5
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC-CCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN-RNG 172 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~-~~g 172 (534)
|+||+|||++.+++||+|+++|+||++..+|+|+|| |+|++.+ .++ ...+ ..+.+++++..+. .+.
T Consensus 1 viip~~n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~---------~~~-~~~~--~~~~~v~~~~~~~~~~~ 68 (229)
T cd04192 1 VVIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQ---------ILE-FAAA--KPNFQLKILNNSRVSIS 68 (229)
T ss_pred CEEEecCcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHH---------HHH-HHHh--CCCcceEEeeccCcccc
Confidence 689999999999999999999999985555655655 7776665 554 2222 2356677775542 355
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhh
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVE 252 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 252 (534)
||+.++|.|++++ ++||++++|+|+.++|++|++++..+ .+++.+++++..... ...++.+..+..+........
T Consensus 69 g~~~a~n~g~~~~---~~d~i~~~D~D~~~~~~~l~~l~~~~-~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 143 (229)
T cd04192 69 GKKNALTTAIKAA---KGDWIVTTDADCVVPSNWLLTFVAFI-QKEQIGLVAGPVIYF-KGKSLLAKFQRLDWLSLLGLI 143 (229)
T ss_pred hhHHHHHHHHHHh---cCCEEEEECCCcccCHHHHHHHHHHh-hcCCCcEEeeeeeec-CCccHHHHHHHHHHHHHHHHH
Confidence 7999999999998 99999999999999999999999988 456677777776654 334555554433222211111
Q ss_pred hhcccccCccccccCCcchhhHHHHHHhCCCCCC--CccchHHHHHHHHhCCC-EEEEe--ccCcccccCCcCHHHHHHH
Q 044519 253 QEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR--TTVEDMDLAVRASLKGW-KFVFV--GDLGVKNELPSTFKAYRYQ 327 (534)
Q Consensus 253 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~--~~~ED~~l~~rl~~~G~-ki~~~--~~~~~~~~~p~t~~~~~~Q 327 (534)
. .....+.....+|+++++||++++++|||++. ..+||.+++.++.++|+ ++.+. |++.++++.|.+++++.+|
T Consensus 144 ~-~~~~~~~~~~~~g~~~~~rr~~~~~~ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q 222 (229)
T cd04192 144 A-GSFGLGKPFMCNGANMAYRKEAFFEVGGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQ 222 (229)
T ss_pred h-hHHHhcCccccccceEEEEHHHHHHhcCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHH
Confidence 1 11112223345799999999999999999864 45899999999999999 88887 5677789999999999999
Q ss_pred Hhhhccc
Q 044519 328 QHRWSCG 334 (534)
Q Consensus 328 r~RW~~G 334 (534)
|.||++|
T Consensus 223 ~~Rw~~g 229 (229)
T cd04192 223 RKRWASK 229 (229)
T ss_pred HHHhhcC
Confidence 9999987
No 24
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.97 E-value=1.1e-29 Score=246.39 Aligned_cols=224 Identities=23% Similarity=0.250 Sum_probs=174.2
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
+..|++||+||+|||++.+.++|+|+.+|+||+++.+|+|+|| |+|++.+ ++++..+ + +++++.
T Consensus 26 ~~~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~---------~~~~~~~----~--~v~~i~ 90 (251)
T cd06439 26 AYLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAE---------IAREYAD----K--GVKLLR 90 (251)
T ss_pred CCCCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHH---------HHHHHhh----C--cEEEEE
Confidence 5678999999999999999999999999999986555555555 7776665 6654432 2 566664
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcc
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLD 246 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~ 246 (534)
. +++.||++|+|.|++++ ++|+++++|+|++++|++++++++.+ ++++++++++.....+++. ..........
T Consensus 91 ~-~~~~g~~~a~n~gi~~a---~~d~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~ 163 (251)
T cd06439 91 F-PERRGKAAALNRALALA---TGEIVVFTDANALLDPDALRLLVRHF-ADPSVGAVSGELVIVDGGG--SGSGEGLYWK 163 (251)
T ss_pred c-CCCCChHHHHHHHHHHc---CCCEEEEEccccCcCHHHHHHHHHHh-cCCCccEEEeEEEecCCcc--cchhHHHHHH
Confidence 4 45566999999999999 89999999999999999999999999 6889999999887765542 1110000000
Q ss_pred cchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHH
Q 044519 247 YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRY 326 (534)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~ 326 (534)
.. ................+|+++++||++++ ++++....||.+++.++.++|+++.+.|++.+++..|.+++++.+
T Consensus 164 ~~-~~~~~~~~~~~~~~~~~g~~~~~rr~~~~---~~~~~~~~eD~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 239 (251)
T cd06439 164 YE-NWLKRAESRLGSTVGANGAIYAIRRELFR---PLPADTINDDFVLPLRIARQGYRVVYEPDAVAYEEVAEDGSEEFR 239 (251)
T ss_pred HH-HHHHHHHHhcCCeeeecchHHHhHHHHhc---CCCcccchhHHHHHHHHHHcCCeEEeccccEEEEeCcccHHHHHH
Confidence 00 00001111222334467888999999998 677778899999999999999999999999999999999999999
Q ss_pred HHhhhccchhh
Q 044519 327 QQHRWSCGPSN 337 (534)
Q Consensus 327 Qr~RW~~G~~~ 337 (534)
|+.||.+|.+|
T Consensus 240 ~~~r~~~g~~~ 250 (251)
T cd06439 240 RRVRIAAGNLQ 250 (251)
T ss_pred HHHHHHhcccc
Confidence 99999999976
No 25
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.97 E-value=4.4e-29 Score=256.89 Aligned_cols=245 Identities=18% Similarity=0.200 Sum_probs=186.5
Q ss_pred CCCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCC-ceEEEEEcC-----CChhhhchhhhhhhHHHHHHHHHH------
Q 044519 88 KSYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSD-RLIVQVLDD-----STNEVLRTDFFQYTQKLVELECLK------ 154 (534)
Q Consensus 88 ~~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~-~~~I~V~Dd-----s~D~t~~~~~~~~~~~~v~~~~~~------ 154 (534)
...+.+-.+||||||. +.+++||+|+..++||+. +++++|+|| +.|.++. +++-+...+
T Consensus 22 ~~~~~~i~~v~cy~E~~~~l~~tldsl~~~~y~~~~k~~~vi~DG~i~g~g~~~~tp--------~~~l~~~~~~~~~~~ 93 (527)
T PF03142_consen 22 FPDKFVICLVPCYSEGEEELRTTLDSLATTDYDDSRKLIFVICDGMIKGSGNDKTTP--------EIVLDILGDFVDPPE 93 (527)
T ss_pred CCCceEEEEEccccCChHHHHHHHHHHHhcCCCCcccEEEEEcCcEEecCCCCCChH--------HHHHHhhcccCCCcC
Confidence 3456788899999998 899999999999999976 566667888 3444444 233222220
Q ss_pred ------H--------------------hhcC-----------ccEEEEEe----------cCCCCCChhHHHHHHH----
Q 044519 155 ------W--------------------IEKG-----------VNVKYETR----------KNRNGYKAGALKEGLE---- 183 (534)
Q Consensus 155 ------~--------------------~~~~-----------~~v~~~~r----------~~~~g~Ka~aln~gl~---- 183 (534)
| ...+ .+..++.. .+.|.||.+.+-..+.
T Consensus 94 ~~~~~~~~~~~~g~~~~n~~~vy~g~y~~~~~~~~~~~~~~~vp~~~vvk~g~~~e~~~~k~~NrGKRDsq~~~~~fl~~ 173 (527)
T PF03142_consen 94 DPEPLSYVSLGEGSKQHNMAKVYSGFYEYDGDSHVPPEKQQRVPYIVVVKCGTPSERSSPKPGNRGKRDSQILLMSFLNK 173 (527)
T ss_pred CCCCcceEEeccCchhhcCEEEEEEEEecCCccccccccccccCEEEEEEcCChHHhcccccccCCchHHHHHHHHHHHH
Confidence 0 0000 11111111 1334467776521111
Q ss_pred -------------------hh---hccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhH
Q 044519 184 -------------------KQ---YVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQ 241 (534)
Q Consensus 184 -------------------~a---~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~ 241 (534)
.. .....||++.+|||+.++||++.+++..+.+||++++++|.....|...++++..|
T Consensus 174 ~~~~~~~~~~~~e~~~~i~~~~g~~~~~~~~il~~DaDt~~~p~~~~~lv~~m~~d~~i~gvCG~t~i~n~~~s~~t~~Q 253 (527)
T PF03142_consen 174 VHFNNPMTPLELELFHQIWNIIGVDPDFYEYILMVDADTKFDPDSVNRLVDAMERDPKIGGVCGETRIDNKGQSWWTMYQ 253 (527)
T ss_pred HhcCCCCchHHHHHHHHHHHHhccCccceEEEEEecCCceEcHHHHHHHHHHHcCCCCeEEEeceeEEcCCCCCHhhhee
Confidence 00 11457999999999999999999999999899999999999999999999999999
Q ss_pred hhhcccchhhhhhcccccCccccccCCcchhhHHHHHHh--------------CCCCC-----------CCccchHHHHH
Q 044519 242 EMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDA--------------GGWKD-----------RTTVEDMDLAV 296 (534)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~--------------Gg~~~-----------~~~~ED~~l~~ 296 (534)
..+|...+.......+..+.+.|++|++.++|-++.+.- .+|.+ ..++||..++.
T Consensus 254 ~fEY~ish~l~Ka~Es~fG~VtCLPGcfsmyR~~a~~~~~~~~~p~l~~~~i~~~Y~~~~~dtlh~~nl~~lGEDR~Ltt 333 (527)
T PF03142_consen 254 VFEYAISHHLQKAFESVFGSVTCLPGCFSMYRISALMDGDGYWVPLLISPDIIEKYSENPVDTLHQKNLLDLGEDRWLTT 333 (527)
T ss_pred ccchhHHHHHHHHHHHHhCceeecCCcceeeeeehhccccccccccccchHHHHHHhhccchHHHHHhhhhcchhHHHHH
Confidence 999888888888888888999999999999999887651 12211 13699999999
Q ss_pred HHHhC--CCEEEEeccCcccccCCcCHHHHHHHHhhhccchhhHHh
Q 044519 297 RASLK--GWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCGPSNLFS 340 (534)
Q Consensus 297 rl~~~--G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~ 340 (534)
.+.++ |+|+.|+|++.+++.+|+|++.+.+||+||..|++....
T Consensus 334 LlLk~~~~~k~~y~~~A~a~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 334 LLLKQFPGYKTEYVPSAVAYTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred HHHhhCCCceEEEcccccccccCCccHHHHHHHhhhccchhHhhHh
Confidence 88887 799999999999999999999999999999999986543
No 26
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.96 E-value=8.7e-26 Score=222.74 Aligned_cols=395 Identities=16% Similarity=0.219 Sum_probs=258.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccchhhhhhhchhhhhhcCCCCcEEEEEeccCch-H----HHHHHHHHHHcCC
Q 044519 43 CSVMSLMLFIERVYMAIVILYVKVLRKKRYTEYKLEEMKEDLELNKSYPMVLVQIPMYNEK-E----VYKLSIGAACGLS 117 (534)
Q Consensus 43 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~VsViIP~yne~-~----~l~~~L~sl~~q~ 117 (534)
..+..++..+...+...+..++-+..++.+.. + +.++.+. .....-.|++|+|||+ . -++.+-+|+.+..
T Consensus 101 ~Lfa~lFcwvs~~F~tAl~GF~~L~~~~~r~~-~--~~p~~p~--p~~hrTAilmPiynEd~~rVfAgLrA~~eSla~Tg 175 (736)
T COG2943 101 VLFAVLFCWVSAGFWTALMGFLVLLFGRDRYL-S--IAPNEPL--PDLHRTAILMPIYNEDVNRVFAGLRATYESLAATG 175 (736)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhheeecCCCcC-C--CCCCCCC--CcccceeEEeeccccCHHHHHHHHHHHHHHHHhhC
Confidence 33444555555555555544444443433221 1 1111111 2234589999999998 3 3566777776654
Q ss_pred CCCCceEEEEEcCCChhhhchhhhhhhHH-HHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEe
Q 044519 118 WPSDRLIVQVLDDSTNEVLRTDFFQYTQK-LVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIF 196 (534)
Q Consensus 118 yp~~~~~I~V~Dds~D~t~~~~~~~~~~~-~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~l 196 (534)
. .....++|..||.|+++.. +++ .-.+.|++.. ...+|-|.+|.++.+-|+||...-.+. ++..++|.+++
T Consensus 176 ~-~~~FD~FVLSDs~dpdial-----AEq~a~~~l~~e~~-g~~~ifYRrRr~n~~RKaGNIaDfcrR-wG~~Y~~MlVL 247 (736)
T COG2943 176 H-AEHFDFFVLSDSRDPDIAL-----AEQKAWAELCRELG-GEGNIFYRRRRRNVKRKAGNIADFCRR-WGSAYSYMLVL 247 (736)
T ss_pred C-cccceEEEEcCCCCchhhh-----hHHHHHHHHHHHhC-CCCceeeehHhhhhcccccCHHHHHHH-hCcccceEEEe
Confidence 3 2457788999999998871 111 1123455542 236788888888888899999999988 57799999999
Q ss_pred cCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhccc-chhhhhhcccccCccccccCCcchhhHH
Q 044519 197 DADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDY-HFSVEQEVGSSTCQFFGFNGTAGVWRIQ 275 (534)
Q Consensus 197 DaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~~~~~Rr~ 275 (534)
|||++..+|++.++++.|+.||+.|++|+.....|.+ ++..|+|++.... .-.......-...+-.++-|.|.++|.+
T Consensus 248 DADSvMtgd~lvrLv~~ME~~P~aGlIQt~P~~~gg~-TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~ 326 (736)
T COG2943 248 DADSVMTGDCLVRLVRLMEANPDAGLIQTSPKASGGD-TLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTK 326 (736)
T ss_pred ecccccCchHHHHHHHHHhhCCCCceeecchhhcCcc-hHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeech
Confidence 9999999999999999999999999999999988875 7888888653211 0000000111112233457999999999
Q ss_pred HHHHhCC---------CCCCCccchHHHHHHHHhCCCEEEEeccCc-ccccCCcCHHHHHHHHhhhccchhhHHhhhhhh
Q 044519 276 AIEDAGG---------WKDRTTVEDMDLAVRASLKGWKFVFVGDLG-VKNELPSTFKAYRYQQHRWSCGPSNLFSKMTRE 345 (534)
Q Consensus 276 ~l~~~Gg---------~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~-~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~ 345 (534)
++.+..| |..+.++.|.--+..+++.||.+...++.. .|+|.|.|+-++.++-+||+.|++|.++
T Consensus 327 aF~~hcgLp~LpG~~pFgG~ilSHDfvEAALmRRaGW~v~ia~dL~GSyEE~PpnLlD~l~RDRRWC~GNLqh~r----- 401 (736)
T COG2943 327 AFIEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWIAYDLDGSYEELPPNLLDELKRDRRWCHGNLQHFR----- 401 (736)
T ss_pred hhHHhcCCCCCCCCCCCCccccchHHHHHHHHhhcCceEEEeccCCCchhhCCchHHHHHhhhhHhhhcchhhce-----
Confidence 9998755 444556889999999999999999998765 6899999999999999999999999765
Q ss_pred hhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHh--------hhhccc---cchhH-------------HHH
Q 044519 346 IILCERVSVWKRLYLIYAFFIVRKIIAHWVTFFFYC-IVIPT--------SVLVPE---IQLTK-------------PIA 400 (534)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~--------~~l~~~---~~~~~-------------~~~ 400 (534)
++..+++++..+.+++.+..- .+.+|+..++..+ +.++. .+.-|. ..+|. +.+
T Consensus 402 l~~~~GlHwvsR~h~~tGVms--YlsaPlWfl~ll~g~al~~~~~l~~p~yFt~p~qlfp~wp~~~~~~a~~lf~~Tm~l 479 (736)
T COG2943 402 LFLVKGLHWVSRAHFLTGVMS--YLSAPLWFLFLLLGTALQAVHALTEPQYFTQPRQLFPVWPQWRPELAIALFAITMVL 479 (736)
T ss_pred eeccCCccHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHhHhhhchhhhcChHhhcCCCCCCCHHHHHHHHHHHHHH
Confidence 346788999999987754332 1223332211111 11111 111011 01111 123
Q ss_pred HHHHHHHHHHHHhhccc---hh---HH--------HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEcccCC
Q 044519 401 IYIPATITLLNAVCTPR---SF---HL--------IVFWILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHG 460 (534)
Q Consensus 401 ~~l~~~~~~~~~~~~~~---~~---~~--------~~~~~l~~~~~~~~~~~a~l~gl~~~~~~~~~~~T~K~~ 460 (534)
+++|-+++++..+.++. .+ .. ..+..+..+++.+.++.++++.++ |++..|.-.+|..
T Consensus 480 Lf~PKil~~~ll~~k~~~~k~~GG~~Rv~ls~~lE~llSaL~APv~Ml~htr~Vv~~l~--G~~~gW~sq~RDd 551 (736)
T COG2943 480 LFLPKLLSILLLWAKKGGTKEFGGALRVTLSLLLEVLLSALLAPVRMLFHTRFVVSALL--GWDVGWNSQQRDD 551 (736)
T ss_pred HHhHHHHHHHHHHcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccCcCCCCCCC
Confidence 45566665555443311 11 11 133445566677888999999999 9999999888853
No 27
>PLN02195 cellulose synthase A
Probab=99.96 E-value=1.6e-25 Score=239.39 Aligned_cols=273 Identities=19% Similarity=0.239 Sum_probs=191.1
Q ss_pred CCCCcEEEEEecc---Cch-HHHHHHHHHHHcCCCCCCceEEEEEcCC-C------------------------------
Q 044519 88 KSYPMVLVQIPMY---NEK-EVYKLSIGAACGLSWPSDRLIVQVLDDS-T------------------------------ 132 (534)
Q Consensus 88 ~~~P~VsViIP~y---ne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds-~------------------------------ 132 (534)
+++|.|+|.|++- .|+ -....|+-|+++.|||.+++-++|.||+ +
T Consensus 249 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRa 328 (977)
T PLN02195 249 SQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFARKWVPFCKKYSIEPRA 328 (977)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 5699999999885 454 4678999999999999999999999984 2
Q ss_pred ---------hhh---hc----------hhhhhhhHHHHHHHHHH---Hhh------------------------------
Q 044519 133 ---------NEV---LR----------TDFFQYTQKLVELECLK---WIE------------------------------ 157 (534)
Q Consensus 133 ---------D~t---~~----------~~~~~~~~~~v~~~~~~---~~~------------------------------ 157 (534)
|.. .. ..+||.....++...++ .++
T Consensus 329 Pe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~~~~dHp~IIqVll~~~ 408 (977)
T PLN02195 329 PEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGET 408 (977)
T ss_pred HHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCCCCCCCCcchhhhhccCC
Confidence 111 00 02333333333322211 000
Q ss_pred --------cCccEEEEEecCCCC----CChhHHHHHHHhhh-ccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCC----c
Q 044519 158 --------KGVNVKYETRKNRNG----YKAGALKEGLEKQY-VKDCQFVVIFDADFQP-DEDFLWRTIPYLLENK----E 219 (534)
Q Consensus 158 --------~~~~v~~~~r~~~~g----~Ka~aln~gl~~a~-~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~----~ 219 (534)
.-+++.|+.|+++.| .||||+|.+++.+. ..++++|+.+|||+.+ +++++++.+.+| .|| +
T Consensus 409 ~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~-~D~~~g~~ 487 (977)
T PLN02195 409 GARDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFL-MDPVVGRD 487 (977)
T ss_pred CCcccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhc-cCcccCCe
Confidence 114567888887766 59999999998753 3689999999999877 558999999998 677 7
Q ss_pred EEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhC------------------
Q 044519 220 LGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG------------------ 281 (534)
Q Consensus 220 v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G------------------ 281 (534)
++.||.++.+.|.+.+-. . .-.....|...+..... ..-+.+.|+++++||+++-..+
T Consensus 488 va~VQ~PQ~F~~i~~~D~--y-~~~~~~ffd~~~~g~dg-lqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~ 563 (977)
T PLN02195 488 VCYVQFPQRFDGIDRSDR--Y-ANRNVVFFDVNMKGLDG-IQGPVYVGTGCVFNRQALYGYGPPSLPRLPKSSSSSSSCC 563 (977)
T ss_pred eEEEcCCcccCCCCCCCC--C-Ccccceeeeeeeccccc-cCCccccccCceeeehhhhccCcccccccccccccccccc
Confidence 889999999987654310 0 01112233344433322 2334456777777777765321
Q ss_pred --------------------------------------------------------------------------------
Q 044519 282 -------------------------------------------------------------------------------- 281 (534)
Q Consensus 282 -------------------------------------------------------------------------------- 281 (534)
T Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~ 643 (977)
T PLN02195 564 CPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPESANPSTL 643 (977)
T ss_pred ccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHHHHHHhcCCCCCCCcHHH
Confidence
Q ss_pred ----------------------CCCCCCccchHHHHHHHHhCCCEEEEecc--CcccccCCcCHHHHHHHHhhhccchhh
Q 044519 282 ----------------------GWKDRTTVEDMDLAVRASLKGWKFVFVGD--LGVKNELPSTFKAYRYQQHRWSCGPSN 337 (534)
Q Consensus 282 ----------------------g~~~~~~~ED~~l~~rl~~~G~ki~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~G~~~ 337 (534)
||.-++++||...+++++.+|||.+|++. ....+.+|.|+.++..||.||+.|.+|
T Consensus 644 l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L~Qr~RWA~G~lq 723 (977)
T PLN02195 644 IKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSVE 723 (977)
T ss_pred HHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCCHHHHHHHHHHHHhchhh
Confidence 22223469999999999999999999864 346799999999999999999999999
Q ss_pred HHhhhhhhhhh---cCCCChhHHHHHHHHHH
Q 044519 338 LFSKMTREIIL---CERVSVWKRLYLIYAFF 365 (534)
Q Consensus 338 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 365 (534)
++......++. .+++++.+++.++...+
T Consensus 724 I~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~l 754 (977)
T PLN02195 724 IFLSRHCPLWYGYGGGRLKWLQRLAYINTIV 754 (977)
T ss_pred hhhccCCccccccCCCCCCHHHHHHHHHHHH
Confidence 98743334432 36799999998775544
No 28
>PLN02189 cellulose synthase
Probab=99.96 E-value=8.7e-26 Score=242.78 Aligned_cols=273 Identities=17% Similarity=0.229 Sum_probs=190.8
Q ss_pred CCCCcEEEEEecc---Cch-HHHHHHHHHHHcCCCCCCceEEEEEcCC-Chhhh--------------------------
Q 044519 88 KSYPMVLVQIPMY---NEK-EVYKLSIGAACGLSWPSDRLIVQVLDDS-TNEVL-------------------------- 136 (534)
Q Consensus 88 ~~~P~VsViIP~y---ne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds-~D~t~-------------------------- 136 (534)
.++|.|+|.|++- .|+ -....|+-|+++.|||.+++-++|.||+ +.-|.
T Consensus 328 ~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRa 407 (1040)
T PLN02189 328 NMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEFARKWVPFCKKFSIEPRA 407 (1040)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 3599999999885 455 5678999999999999999999999984 21111
Q ss_pred ----------------c----------hhhhhhhHHHHHHHHHH---Hhh------------------------------
Q 044519 137 ----------------R----------TDFFQYTQKLVELECLK---WIE------------------------------ 157 (534)
Q Consensus 137 ----------------~----------~~~~~~~~~~v~~~~~~---~~~------------------------------ 157 (534)
. ..+||.....++...++ .+.
T Consensus 408 Pe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g~~~~dHp~IiQVll~~~ 487 (1040)
T PLN02189 408 PEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPGNNTRDHPGMIQVFLGHS 487 (1040)
T ss_pred HHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCCCCCCCCHHHHHHHhcCC
Confidence 0 01223222222222100 000
Q ss_pred --------cCccEEEEEecCCCC----CChhHHHHHHHhhh-ccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCC----c
Q 044519 158 --------KGVNVKYETRKNRNG----YKAGALKEGLEKQY-VKDCQFVVIFDADFQP-DEDFLWRTIPYLLENK----E 219 (534)
Q Consensus 158 --------~~~~v~~~~r~~~~g----~Ka~aln~gl~~a~-~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~----~ 219 (534)
.-+++.|+.|+++.| .||||+|..++.+. ..+++||+.+|+|+.+ +|+.+++.+.+| .|| +
T Consensus 488 ~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCff-lDp~~g~~ 566 (1040)
T PLN02189 488 GGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFL-MDPQIGRK 566 (1040)
T ss_pred CCccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhh-cCCccCce
Confidence 012388999988776 69999999997653 2699999999999999 679999999998 577 8
Q ss_pred EEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhC------------------
Q 044519 220 LGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG------------------ 281 (534)
Q Consensus 220 v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G------------------ 281 (534)
++.||.++.+.|-+.+-.-. ......|...+... +...-+.+.|+++++||+++-...
T Consensus 567 vAfVQFPQrF~~i~k~D~Yg---n~~~vffdi~~~Gl-DGlqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~ 642 (1040)
T PLN02189 567 VCYVQFPQRFDGIDTHDRYA---NRNTVFFDINMKGL-DGIQGPVYVGTGCVFRRQALYGYDPPKGPKRPKMVTCDCCPC 642 (1040)
T ss_pred eEEEeCccccCCCCCCCccC---Cccceeeeeeeccc-ccCCCccccccCceeeeeeeeccCcccccccccccccchhhh
Confidence 99999999988765431100 01112233333322 222333456777777776654210
Q ss_pred --------------------------------------------------------------------------------
Q 044519 282 -------------------------------------------------------------------------------- 281 (534)
Q Consensus 282 -------------------------------------------------------------------------------- 281 (534)
T Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~ 722 (1040)
T PLN02189 643 FGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYED 722 (1040)
T ss_pred cccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCCCCCCCcHHHHHHHHHhhcccccc
Confidence
Q ss_pred --------CCCCCCccchHHHHHHHHhCCCEEEEec--cCcccccCCcCHHHHHHHHhhhccchhhHHhhhhhhhhh---
Q 044519 282 --------GWKDRTTVEDMDLAVRASLKGWKFVFVG--DLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIIL--- 348 (534)
Q Consensus 282 --------g~~~~~~~ED~~l~~rl~~~G~ki~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~--- 348 (534)
||.-++++||..++++++.+|||.+|+. .+...+.+|.|+.++..||.||+.|.+|++......++.
T Consensus 723 ~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~ 802 (1040)
T PLN02189 723 KTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYK 802 (1040)
T ss_pred CCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhhhhHHHhhccCCccccccC
Confidence 2333457999999999999999999994 455679999999999999999999999998754344442
Q ss_pred cCCCChhHHHHHHHHHH
Q 044519 349 CERVSVWKRLYLIYAFF 365 (534)
Q Consensus 349 ~~~~~~~~~~~~~~~~~ 365 (534)
.+++++.+++.++...+
T Consensus 803 ~~~L~l~QRL~Yl~~~l 819 (1040)
T PLN02189 803 GGNLKWLERFAYVNTTI 819 (1040)
T ss_pred CCCCCHHHHHHHHHHHH
Confidence 35689999998775544
No 29
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.96 E-value=1.7e-27 Score=230.34 Aligned_cols=230 Identities=18% Similarity=0.237 Sum_probs=172.3
Q ss_pred cEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEc-CCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC
Q 044519 92 MVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLD-DSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR 170 (534)
Q Consensus 92 ~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D-ds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~ 170 (534)
++||+||+|||++.+.++|+|+.+|+||....+|+|+| +|+|++.+ .+++..+ +...++++.. +
T Consensus 1 ~~sIiip~~n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~---------~~~~~~~----~~~~v~~i~~--~ 65 (249)
T cd02525 1 FVSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTRE---------IVQEYAA----KDPRIRLIDN--P 65 (249)
T ss_pred CEEEEEEcCCchhhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHH---------HHHHHHh----cCCeEEEEeC--C
Confidence 48999999999999999999999999974444555555 57776665 6655433 3456777743 3
Q ss_pred CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchh
Q 044519 171 NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFS 250 (534)
Q Consensus 171 ~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~ 250 (534)
++|+++|+|.|++.+ ++||++++|+|+.++|++|+++++.+ ++++.+++++.....+.+. ...... ......+.
T Consensus 66 ~~~~~~a~N~g~~~a---~~d~v~~lD~D~~~~~~~l~~~~~~~-~~~~~~~v~~~~~~~~~~~-~~~~~~-~~~~~~~~ 139 (249)
T cd02525 66 KRIQSAGLNIGIRNS---RGDIIIRVDAHAVYPKDYILELVEAL-KRTGADNVGGPMETIGESK-FQKAIA-VAQSSPLG 139 (249)
T ss_pred CCCchHHHHHHHHHh---CCCEEEEECCCccCCHHHHHHHHHHH-hcCCCCEEecceecCCCCh-HHHHHH-HHhhchhc
Confidence 445899999999999 99999999999999999999999988 6678888887765443321 111111 11111111
Q ss_pred hhhh--cccccCccccccCCcchhhHHHHHHhCCCCCC-CccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHH
Q 044519 251 VEQE--VGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR-TTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQ 327 (534)
Q Consensus 251 ~~~~--~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Q 327 (534)
.... ............|+++++||++++++|+|++. ..+||.+++.|+.++|+++.++|++.+++..+.+++++.+|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~~~~~~~~~~s~~~~~~~ 219 (249)
T cd02525 140 SGGSAYRGGAVKIGYVDTVHHGAYRREVFEKVGGFDESLVRNEDAELNYRLRKAGYKIWLSPDIRVYYYPRSTLKKLARQ 219 (249)
T ss_pred cCCccccccccccccccccccceEEHHHHHHhCCCCcccCccchhHHHHHHHHcCcEEEEcCCeEEEEcCCCCHHHHHHH
Confidence 1000 00011102235788899999999999999875 34799999999999999999999999999999999999999
Q ss_pred HhhhccchhhHHhhh
Q 044519 328 QHRWSCGPSNLFSKM 342 (534)
Q Consensus 328 r~RW~~G~~~~~~~~ 342 (534)
+.||..|..+..+++
T Consensus 220 ~~r~~~~~~~~~~~~ 234 (249)
T cd02525 220 YFRYGKWRARTLRKH 234 (249)
T ss_pred HHHHhhhhHHHHHhC
Confidence 999999999988765
No 30
>PLN02248 cellulose synthase-like protein
Probab=99.96 E-value=4e-26 Score=245.81 Aligned_cols=200 Identities=19% Similarity=0.279 Sum_probs=145.9
Q ss_pred cEEEEEecCCCC----CChhHHHHHHHhhhc-cCCcEEEEecCCCCC-CHHHHHHHHHHHhcC---CcEEEEeeeeEeec
Q 044519 161 NVKYETRKNRNG----YKAGALKEGLEKQYV-KDCQFVVIFDADFQP-DEDFLWRTIPYLLEN---KELGLVQARWKFVN 231 (534)
Q Consensus 161 ~v~~~~r~~~~g----~Ka~aln~gl~~a~~-~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~---~~v~~V~~~~~~~n 231 (534)
.+.|+.|+++.| .||||+|..++.+.. .+++||+.+|||+.+ +++.+++.+.+| .| ++++.||.++++.|
T Consensus 586 ~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~-lD~~g~~vAfVQFPQrF~~ 664 (1135)
T PLN02248 586 MLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFM-MDRGGDRICYVQFPQRFEG 664 (1135)
T ss_pred eeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchhe-ecCCCCceEEEcCCcccCC
Confidence 356777776665 699999999985532 699999999999887 777999999999 45 79999999999887
Q ss_pred CCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhC------------------------------
Q 044519 232 ADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG------------------------------ 281 (534)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G------------------------------ 281 (534)
-+.+-.-. ......|...+... +...-..+.|+++++||+++-..+
T Consensus 665 I~k~D~Yg---n~~~Vffdi~~~Gl-DGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (1135)
T PLN02248 665 IDPSDRYA---NHNTVFFDVNMRAL-DGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPE 740 (1135)
T ss_pred CCCCCccC---Ccceeeeeeeeccc-cccCCccccccCceeeehhhcCcCCccccccccccccccccccccccccccccc
Confidence 65431100 01112233333322 222333456777777777664210
Q ss_pred --------------------------------------------------------------------------------
Q 044519 282 -------------------------------------------------------------------------------- 281 (534)
Q Consensus 282 -------------------------------------------------------------------------------- 281 (534)
T Consensus 741 ~~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~ 820 (1135)
T PLN02248 741 EQPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYED 820 (1135)
T ss_pred ccccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhccccccc
Confidence
Q ss_pred --------CCCCCCccchHHHHHHHHhCCCEEEEec--cCcccccCCcCHHHHHHHHhhhccchhhHHhhhhhhhhhcCC
Q 044519 282 --------GWKDRTTVEDMDLAVRASLKGWKFVFVG--DLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCER 351 (534)
Q Consensus 282 --------g~~~~~~~ED~~l~~rl~~~G~ki~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~ 351 (534)
||..++++||...+++++.+|||.+|+. .....+.+|+++.++..||.||+.|.+|++......++..++
T Consensus 821 ~T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~~~ 900 (1135)
T PLN02248 821 KTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASRR 900 (1135)
T ss_pred CCchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccCCC
Confidence 2233347999999999999999999983 445679999999999999999999999998765455566678
Q ss_pred CChhHHHHHHHHHH
Q 044519 352 VSVWKRLYLIYAFF 365 (534)
Q Consensus 352 ~~~~~~~~~~~~~~ 365 (534)
+++.+++.++...+
T Consensus 901 Lsl~QRL~Yl~~~l 914 (1135)
T PLN02248 901 LKFLQRIAYLNVGI 914 (1135)
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999775433
No 31
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=99.95 E-value=1.4e-25 Score=241.84 Aligned_cols=273 Identities=18% Similarity=0.221 Sum_probs=189.7
Q ss_pred CCCCcEEEEEecc---Cch-HHHHHHHHHHHcCCCCCCceEEEEEcCC-Chhhh--------------------------
Q 044519 88 KSYPMVLVQIPMY---NEK-EVYKLSIGAACGLSWPSDRLIVQVLDDS-TNEVL-------------------------- 136 (534)
Q Consensus 88 ~~~P~VsViIP~y---ne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds-~D~t~-------------------------- 136 (534)
+++|.|.|.|++- .|+ -....|+-|+++.|||.+++-++|.||+ +.-|.
T Consensus 346 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRa 425 (1079)
T PLN02638 346 SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRA 425 (1079)
T ss_pred ccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 4699999999885 454 4678999999999999999999999984 21111
Q ss_pred ----------------c----------hhhhhhhHHHHHHHHHH---Hhh------------------------------
Q 044519 137 ----------------R----------TDFFQYTQKLVELECLK---WIE------------------------------ 157 (534)
Q Consensus 137 ----------------~----------~~~~~~~~~~v~~~~~~---~~~------------------------------ 157 (534)
. ..+||.....++...++ .+.
T Consensus 426 Pe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g~~~~dHp~IiqVll~~~ 505 (1079)
T PLN02638 426 PEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHS 505 (1079)
T ss_pred HHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCCCCCCCCHHHHHHHhcCC
Confidence 0 01333333223222211 000
Q ss_pred --------cCccEEEEEecCCCC----CChhHHHHHHHhhh-ccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCCc----
Q 044519 158 --------KGVNVKYETRKNRNG----YKAGALKEGLEKQY-VKDCQFVVIFDADFQP-DEDFLWRTIPYLLENKE---- 219 (534)
Q Consensus 158 --------~~~~v~~~~r~~~~g----~Ka~aln~gl~~a~-~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~---- 219 (534)
.-+++.|+.|+++.| .||||+|..++.+. ..+++||+.+|+|+.+ +|+.+++.+.+| -||+
T Consensus 506 ~~~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~-lDp~~g~~ 584 (1079)
T PLN02638 506 GGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFL-MDPNLGKS 584 (1079)
T ss_pred CccccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhh-cCcccCCe
Confidence 113458899988776 69999999997663 2699999999999877 599999999998 5775
Q ss_pred EEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHh------------------C
Q 044519 220 LGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDA------------------G 281 (534)
Q Consensus 220 v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~------------------G 281 (534)
++.||.++++.|-+.+-.-. ......|...+... +...-+.+.|+++++||+++-.. |
T Consensus 585 vafVQFPQrF~~i~k~D~Yg---n~~~vffdi~~~Gl-DGlqGP~YvGTGC~fRR~ALYG~~p~~~~~~~~~~~~~~~~~ 660 (1079)
T PLN02638 585 VCYVQFPQRFDGIDRNDRYA---NRNTVFFDINLRGL-DGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKKPGFLSSLCG 660 (1079)
T ss_pred eEEecCCcccCCCCCCCccc---ccceeeeccccccc-cccCCccccccCcceeehhhcCcCCccccccccccccccccc
Confidence 88999999988765431100 01112233333322 22333445677777777776522 0
Q ss_pred --------------------------------------------------------------------------------
Q 044519 282 -------------------------------------------------------------------------------- 281 (534)
Q Consensus 282 -------------------------------------------------------------------------------- 281 (534)
T Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~ 740 (1079)
T PLN02638 661 GSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQ 740 (1079)
T ss_pred ccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhccccHHHHHHHHHhhcCCCC
Confidence
Q ss_pred -----------------------------CCCCCCccchHHHHHHHHhCCCEEEEe-ccC-cccccCCcCHHHHHHHHhh
Q 044519 282 -----------------------------GWKDRTTVEDMDLAVRASLKGWKFVFV-GDL-GVKNELPSTFKAYRYQQHR 330 (534)
Q Consensus 282 -----------------------------g~~~~~~~ED~~l~~rl~~~G~ki~~~-~~~-~~~~~~p~t~~~~~~Qr~R 330 (534)
||.-++++||..++++++.+|||.+|+ |+. ...+.+|.++.++..||.|
T Consensus 741 ~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~l~d~L~Qr~R 820 (1079)
T PLN02638 741 SATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLR 820 (1079)
T ss_pred CCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchHhcCcCCCCHHHHHHHHHH
Confidence 122234799999999999999999999 543 4579999999999999999
Q ss_pred hccchhhHHhhhhhhhhh--cCCCChhHHHHHHHHHH
Q 044519 331 WSCGPSNLFSKMTREIIL--CERVSVWKRLYLIYAFF 365 (534)
Q Consensus 331 W~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 365 (534)
|+.|.+|++......++. ++++++.+++.++...+
T Consensus 821 WA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~ 857 (1079)
T PLN02638 821 WALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTI 857 (1079)
T ss_pred HhhcchheeeccCCccccccCCCCCHHHHHHHHHHHH
Confidence 999999998643333442 46899999998775443
No 32
>PLN02400 cellulose synthase
Probab=99.95 E-value=1.6e-24 Score=233.89 Aligned_cols=273 Identities=19% Similarity=0.223 Sum_probs=184.0
Q ss_pred CCCCcEEEEEecc---Cch-HHHHHHHHHHHcCCCCCCceEEEEEcCC-Chhhh--------------------------
Q 044519 88 KSYPMVLVQIPMY---NEK-EVYKLSIGAACGLSWPSDRLIVQVLDDS-TNEVL-------------------------- 136 (534)
Q Consensus 88 ~~~P~VsViIP~y---ne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds-~D~t~-------------------------- 136 (534)
+++|.|+|.|++- .|+ -....|+-|+++.|||.+++-++|.||+ +.-|.
T Consensus 353 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~FA~~WvPFCkK~~IepRa 432 (1085)
T PLN02400 353 SQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRA 432 (1085)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCC
Confidence 4699999999885 454 4678999999999999999999999984 21111
Q ss_pred --------------c------------hhhhhhhHHHHHHHHHH---Hhh------------------------------
Q 044519 137 --------------R------------TDFFQYTQKLVELECLK---WIE------------------------------ 157 (534)
Q Consensus 137 --------------~------------~~~~~~~~~~v~~~~~~---~~~------------------------------ 157 (534)
. ..+||.....++...++ .++
T Consensus 433 Pe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~iIqVll~~~ 512 (1085)
T PLN02400 433 PEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHS 512 (1085)
T ss_pred HHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCccCCCCCCCCCchhhhhhhcCC
Confidence 0 01333333333322200 000
Q ss_pred --------cCccEEEEEecCCCC----CChhHHHHHHHhhh-ccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCC----c
Q 044519 158 --------KGVNVKYETRKNRNG----YKAGALKEGLEKQY-VKDCQFVVIFDADFQP-DEDFLWRTIPYLLENK----E 219 (534)
Q Consensus 158 --------~~~~v~~~~r~~~~g----~Ka~aln~gl~~a~-~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~----~ 219 (534)
.-+++.|+.|+++.| .||||+|..++.+. ..++.||+-+|+|+.. +|+.+++.+..|. || +
T Consensus 513 ~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf~l-D~~~g~~ 591 (1085)
T PLN02400 513 GGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMM-DPAIGKK 591 (1085)
T ss_pred CCcccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCCchhHHhhhhhee-ccCCCce
Confidence 114567888988776 69999999999653 3799999999999888 9999999999884 55 7
Q ss_pred EEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHH---------------------
Q 044519 220 LGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIE--------------------- 278 (534)
Q Consensus 220 v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~--------------------- 278 (534)
++.||-++++.|-+.+-.-.- .....|..... +-+...-+.+.|+++++||+++-
T Consensus 592 ~afVQFPQrF~gi~~~D~Y~n---~~~vffdi~~~-GldGlqGP~YvGTGC~frR~aLYG~~p~~~~~~~~~~~~~~~~~ 667 (1085)
T PLN02400 592 TCYVQFPQRFDGIDLHDRYAN---RNIVFFDINLK-GLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCC 667 (1085)
T ss_pred eEEEeCCcccCCCCCCCCccc---ceeEEeecccc-ccccCCCccccccCcceeeeeeccCCCccccccccccccccccc
Confidence 999999999876543310000 00001111111 11111111223333333333332
Q ss_pred --------------------------------------------------------------------------------
Q 044519 279 -------------------------------------------------------------------------------- 278 (534)
Q Consensus 279 -------------------------------------------------------------------------------- 278 (534)
T Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~ 747 (1085)
T PLN02400 668 GSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPST 747 (1085)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccccHHHHHHHHHHhcCCCCCC
Confidence
Q ss_pred -------Hh-----------------CCCCCCCccchHHHHHHHHhCCCEEEEec--cCcccccCCcCHHHHHHHHhhhc
Q 044519 279 -------DA-----------------GGWKDRTTVEDMDLAVRASLKGWKFVFVG--DLGVKNELPSTFKAYRYQQHRWS 332 (534)
Q Consensus 279 -------~~-----------------Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~--~~~~~~~~p~t~~~~~~Qr~RW~ 332 (534)
++ -||--++++||..++++++.+|||.+|+. .+...+.+|+++.++..||.||+
T Consensus 748 ~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA 827 (1085)
T PLN02400 748 NPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWA 827 (1085)
T ss_pred CcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHh
Confidence 10 03333567999999999999999999994 55678999999999999999999
Q ss_pred cchhhHHhhhhhhhhh--cCCCChhHHHHHHHHHH
Q 044519 333 CGPSNLFSKMTREIIL--CERVSVWKRLYLIYAFF 365 (534)
Q Consensus 333 ~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 365 (534)
.|.+|++......++. .+++++.+++.++...+
T Consensus 828 ~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~ 862 (1085)
T PLN02400 828 LGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIV 862 (1085)
T ss_pred hcchheeeccCCccccccCCCCCHHHHHHHHHHHH
Confidence 9999998754334553 47899999998776544
No 33
>PLN02190 cellulose synthase-like protein
Probab=99.95 E-value=1.1e-24 Score=228.26 Aligned_cols=305 Identities=19% Similarity=0.296 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhhhhhhchhhh-hhcCCCCcEEEEEeccC---ch-HHHHHHHHHHHcCCCCCC
Q 044519 47 SLMLFIERVYMAIVILYVKVLRKKRYTEYKLEEMKEDL-ELNKSYPMVLVQIPMYN---EK-EVYKLSIGAACGLSWPSD 121 (534)
Q Consensus 47 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~VsViIP~yn---e~-~~l~~~L~sl~~q~yp~~ 121 (534)
++..+++..+..+..+.....+.+|.++.. .++.. +.-+++|.|+|.|+++| |+ .....|+-|+++.|||.+
T Consensus 51 W~~~~~~E~wf~~~WlL~q~~kw~pv~r~~---~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~e 127 (756)
T PLN02190 51 WLVAFLCESCFSFVWLLITCIKWSPAEYKP---YPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPAN 127 (756)
T ss_pred HHHHHHHHHHHHHHHHHhccceeeecCCCC---CcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCcc
Confidence 344556666666555444444444544421 11111 11146899999999999 88 788999999999999999
Q ss_pred ceEEEEEcCCC-hhhh--------------------------------------c-----------hhhhhhhHHHHHHH
Q 044519 122 RLIVQVLDDST-NEVL--------------------------------------R-----------TDFFQYTQKLVELE 151 (534)
Q Consensus 122 ~~~I~V~Dds~-D~t~--------------------------------------~-----------~~~~~~~~~~v~~~ 151 (534)
++-++|.||+. .-|. . ..+||.....++..
T Consensus 128 klscYvSDDG~s~LT~~al~EAa~FA~~WvPFCrK~~IepRaPe~YF~~~~~~~~~~~f~~e~~~~K~eYee~k~ri~~a 207 (756)
T PLN02190 128 KLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFRYFLNPPVATEDSEFSKDWEMTKREYEKLSRKVEDA 207 (756)
T ss_pred ccceEEecCCCcHhHHHHHHHHHHHHhhhcccccccCCCcCCHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999852 1111 0 01222222222211
Q ss_pred H------------HHHh------------------------hcCccEEEEEecCCCC----CChhHHHHHHHhhhc-cCC
Q 044519 152 C------------LKWI------------------------EKGVNVKYETRKNRNG----YKAGALKEGLEKQYV-KDC 190 (534)
Q Consensus 152 ~------------~~~~------------------------~~~~~v~~~~r~~~~g----~Ka~aln~gl~~a~~-~~~ 190 (534)
. +.+. .+-+++.|+.|+++.+ .||||+|..++.+.. .++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~dH~~iiqVll~~~~~~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNa 287 (756)
T PLN02190 208 TGDSHWLDAEDDFEAFSNTKPNDHSTIVKVVWENKGGVGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNA 287 (756)
T ss_pred ccCCCCcccCCcccccCCCCCCCCccceEEEecCCCCccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccC
Confidence 0 0000 0114467888877665 699999999987643 799
Q ss_pred cEEEEecCCCCC-CHHHHHHHHHHHhcCC----cEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccc
Q 044519 191 QFVVIFDADFQP-DEDFLWRTIPYLLENK----ELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGF 265 (534)
Q Consensus 191 d~v~~lDaD~~~-~pd~L~~lv~~~~~~~----~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (534)
++|+.+|+|+.. +|+.+++.+..|..++ +++.||-++.+.+.-.|-.+... ..... +-+...-+..
T Consensus 288 P~iLnlDCDmY~Nns~~~r~AmCf~ld~~~~~~~~~fVQfPQ~F~D~y~n~~~v~f--------~~~~~-GldGlqGP~Y 358 (756)
T PLN02190 288 PYMLNVDCDMYANEADVVRQAMCIFLQKSKNSNHCAFVQFPQEFYDSNTNELTVLQ--------SYLGR-GIAGIQGPIY 358 (756)
T ss_pred CeEEEecCccccCchhHHHHhhhhhcCCCCCCCeeEEEeCchhhccccCccceEEE--------EEeec-cccccCCccc
Confidence 999999999866 9999999999985332 68999999987543222111110 00000 0011111112
Q ss_pred cCCcchhhHHH------------------------------------------------------------HHHh-----
Q 044519 266 NGTAGVWRIQA------------------------------------------------------------IEDA----- 280 (534)
Q Consensus 266 ~G~~~~~Rr~~------------------------------------------------------------l~~~----- 280 (534)
.|+++++||++ ++++
T Consensus 359 vGTGCffrR~alyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~~~~~~~~~~~eA~~V~s 438 (756)
T PLN02190 359 IGSGCFHTRRVMYGLSSDDLEDDGSLSSVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPNPQNSLTNSIEAAQEVGH 438 (756)
T ss_pred ccCCcceEeeeecCCCcccccccccccccccccccchhhhhhhcCCcHHHHHHHHHHhccCCCCccchHHHHHHHHhhcc
Confidence 23333333222 2221
Q ss_pred ------------CCCCCCCccchHHHHHHHHhCCCEEEEec--cCcccccCCcCHHHHHHHHhhhccchhhHHhhhhhhh
Q 044519 281 ------------GGWKDRTTVEDMDLAVRASLKGWKFVFVG--DLGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREI 346 (534)
Q Consensus 281 ------------Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~ 346 (534)
-||..++++||..++++++.+|||.+|+. .+...+..|.++.+...||+||+.|.+|++......+
T Consensus 439 C~YE~~T~WG~evG~~ygSitED~~TGl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl 518 (756)
T PLN02190 439 CHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPL 518 (756)
T ss_pred cCCCCCCchhhccCcccceeechHHHHHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCc
Confidence 15666678999999999999999999985 3345688999999999999999999999977643444
Q ss_pred hh--cCCCChhHHHHHHHH
Q 044519 347 IL--CERVSVWKRLYLIYA 363 (534)
Q Consensus 347 ~~--~~~~~~~~~~~~~~~ 363 (534)
+. .+++++.+++.++..
T Consensus 519 ~~g~~~~L~l~QRLaYl~~ 537 (756)
T PLN02190 519 IGMFCRKIRFRQRLAYLYV 537 (756)
T ss_pred eeccCCCCCHHHHHHHHHH
Confidence 43 478999999987643
No 34
>PLN02436 cellulose synthase A
Probab=99.94 E-value=4e-24 Score=229.86 Aligned_cols=273 Identities=19% Similarity=0.259 Sum_probs=181.1
Q ss_pred CCCCcEEEEEecc---Cch-HHHHHHHHHHHcCCCCCCceEEEEEcCC-Chhhh--------------------------
Q 044519 88 KSYPMVLVQIPMY---NEK-EVYKLSIGAACGLSWPSDRLIVQVLDDS-TNEVL-------------------------- 136 (534)
Q Consensus 88 ~~~P~VsViIP~y---ne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds-~D~t~-------------------------- 136 (534)
+++|.|+|.|++- .|+ -....|+-|+++.|||.+++-++|.||+ +.-|.
T Consensus 362 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRa 441 (1094)
T PLN02436 362 SELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRA 441 (1094)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 5699999999885 454 5678999999999999999999999984 21111
Q ss_pred ----------------c----------hhhhhhhHHHHHHHHHH--------Hh-h------------------------
Q 044519 137 ----------------R----------TDFFQYTQKLVELECLK--------WI-E------------------------ 157 (534)
Q Consensus 137 ----------------~----------~~~~~~~~~~v~~~~~~--------~~-~------------------------ 157 (534)
. ..+||.....++...++ +. +
T Consensus 442 Pe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~ 521 (1094)
T PLN02436 442 PEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHS 521 (1094)
T ss_pred HHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCCCCCCCCccceEEEecCC
Confidence 0 01333333333332221 00 0
Q ss_pred --------cCccEEEEEecCCCC----CChhHHHHHHHhhhc-cCCcEEEEecCCCC-CCHHHHHHHHHHHhcCC----c
Q 044519 158 --------KGVNVKYETRKNRNG----YKAGALKEGLEKQYV-KDCQFVVIFDADFQ-PDEDFLWRTIPYLLENK----E 219 (534)
Q Consensus 158 --------~~~~v~~~~r~~~~g----~Ka~aln~gl~~a~~-~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~----~ 219 (534)
.-+++.|+.|+++.| .||||+|..++.+.. .+++||+-+|+|+. -+|+.+++.+..| -|| +
T Consensus 522 ~~~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfl-lD~~~g~~ 600 (1094)
T PLN02436 522 GVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFM-MDPQSGKK 600 (1094)
T ss_pred CCcccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccCchHHHHHhhhhh-cCCccCCe
Confidence 114567888887775 699999999987644 78999999999985 4999999999998 465 8
Q ss_pred EEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHH---------------------
Q 044519 220 LGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIE--------------------- 278 (534)
Q Consensus 220 v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~--------------------- 278 (534)
++.||-++++.|-+.+-.-.- .....|..... +-+...-+.+.|+++++||+++-
T Consensus 601 ~afVQFPQrF~gi~k~D~Y~n---~~~vffdi~~~-GlDGlqGP~YvGTGC~frR~aLYG~~pp~~~~~~~~~~~~~~~~ 676 (1094)
T PLN02436 601 ICYVQFPQRFDGIDRHDRYSN---RNVVFFDINMK-GLDGIQGPIYVGTGCVFRRQALYGYDAPKKKKPPGKTCNCWPKW 676 (1094)
T ss_pred eEEEcCCcccCCCCCCCcccc---cceEeeecccc-ccccCCCccccccCceeeeeeeeccCCccccccccccccccccc
Confidence 999999999877643310000 00000111110 00001111122222222222211
Q ss_pred --------------------------------------------------------------------------------
Q 044519 279 -------------------------------------------------------------------------------- 278 (534)
Q Consensus 279 -------------------------------------------------------------------------------- 278 (534)
T Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~ 756 (1094)
T PLN02436 677 CCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQSPVFVASTLLENGGVPR 756 (1094)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhcccHHHHHHHHHhhcCCCC
Confidence
Q ss_pred ---------------------------HhCCCCCCCccchHHHHHHHHhCCCEEEEe-ccCc-ccccCCcCHHHHHHHHh
Q 044519 279 ---------------------------DAGGWKDRTTVEDMDLAVRASLKGWKFVFV-GDLG-VKNELPSTFKAYRYQQH 329 (534)
Q Consensus 279 ---------------------------~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~-~~~~-~~~~~p~t~~~~~~Qr~ 329 (534)
++ ||--++++||..++++++.+|||.+|+ |+.. ..+.+|.++.++..||.
T Consensus 757 ~~~~~s~l~eA~~V~sC~YE~~T~WG~ev-GwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~L~d~L~Qr~ 835 (1094)
T PLN02436 757 NASPASLLREAIQVISCGYEDKTEWGKEI-GWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVL 835 (1094)
T ss_pred CCCcHHHHHHHHHhhcCCCcccChhhHhh-CeeccceecHHHHHHHHHcCCCceEeCCCCchhhcCcCCCCHHHHHHHHH
Confidence 11 344456799999999999999999998 5553 57999999999999999
Q ss_pred hhccchhhHHhhhhhhhh--hcCCCChhHHHHHHHHHHH
Q 044519 330 RWSCGPSNLFSKMTREII--LCERVSVWKRLYLIYAFFI 366 (534)
Q Consensus 330 RW~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 366 (534)
||+.|.+|++......++ ..+++++.+++.++...++
T Consensus 836 RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly 874 (1094)
T PLN02436 836 RWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVY 874 (1094)
T ss_pred HHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHH
Confidence 999999999865333444 2467999999987755443
No 35
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=99.94 E-value=5.9e-24 Score=228.84 Aligned_cols=84 Identities=21% Similarity=0.378 Sum_probs=69.3
Q ss_pred CCCCCCccchHHHHHHHHhCCCEEEEec-c-CcccccCCcCHHHHHHHHhhhccchhhHHhhhhhhhhh--cCCCChhHH
Q 044519 282 GWKDRTTVEDMDLAVRASLKGWKFVFVG-D-LGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTREIIL--CERVSVWKR 357 (534)
Q Consensus 282 g~~~~~~~ED~~l~~rl~~~G~ki~~~~-~-~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~--~~~~~~~~~ 357 (534)
||.-++++||..++++++.+|||.+|+. + +...+.+|.++.++..||.||+.|.+|++.+....++. .+++++.++
T Consensus 734 Gw~YGSvTEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QR 813 (1044)
T PLN02915 734 GWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLER 813 (1044)
T ss_pred CccccccccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHH
Confidence 3555678999999999999999999994 4 34569999999999999999999999998865444553 478999999
Q ss_pred HHHHHHHH
Q 044519 358 LYLIYAFF 365 (534)
Q Consensus 358 ~~~~~~~~ 365 (534)
+.++...+
T Consensus 814 L~Yl~~~~ 821 (1044)
T PLN02915 814 LAYINTIV 821 (1044)
T ss_pred HHHHHHHH
Confidence 99776544
No 36
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.93 E-value=1.9e-25 Score=222.43 Aligned_cols=209 Identities=16% Similarity=0.105 Sum_probs=145.4
Q ss_pred EEEEeccCch-HHHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCC
Q 044519 94 LVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRN 171 (534)
Q Consensus 94 sViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~ 171 (534)
||+||+|||+ +.+.+||+|+.+|+++....+|+ |+|+|+|++.+ .+.+... .....++++++. +++
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~---------~~~~~~~--~~~~~~v~vi~~-~~n 68 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELK---------LLLEEYY--KKYLPKVKVLRL-KKR 68 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHH---------HHHHHHH--hhcCCcEEEEEc-CCC
Confidence 6999999999 99999999999999876432333 55668898887 4433111 123457888854 455
Q ss_pred CCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHh-------Hhhh
Q 044519 172 GYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRL-------QEMS 244 (534)
Q Consensus 172 g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~-------~~~~ 244 (534)
.|++.|+|.|+++| +||||+++|+|+.++|+||+++++.+.++|.. ++++.....+.+....... ....
T Consensus 69 ~G~~~a~N~g~~~A---~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~-~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (299)
T cd02510 69 EGLIRARIAGARAA---TGDVLVFLDSHCEVNVGWLEPLLARIAENRKT-VVCPIIDVIDADTFEYRGSSGDARGGFDWS 144 (299)
T ss_pred CCHHHHHHHHHHHc---cCCEEEEEeCCcccCccHHHHHHHHHHhCCCe-EEEeeeccccCCCeeEecCCCceeEEeccc
Confidence 66999999999999 99999999999999999999999999766654 5554433222211000000 0000
Q ss_pred cccchh-hh-----hhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEeccCcccc
Q 044519 245 LDYHFS-VE-----QEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFVGDLGVKN 315 (534)
Q Consensus 245 ~~~~~~-~~-----~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~ 315 (534)
+...+. .. ............++|+++++||++++++|||++... .||.|++.|+.++|+++.++|++.+.|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~H 224 (299)
T cd02510 145 LHFKWLPLPEEERRRESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGH 224 (299)
T ss_pred ceeccccCCHHHhhhcCCCCCccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEeeccEEEE
Confidence 000000 00 000011122334579999999999999999998653 599999999999999999999999876
Q ss_pred cCC
Q 044519 316 ELP 318 (534)
Q Consensus 316 ~~p 318 (534)
...
T Consensus 225 ~~~ 227 (299)
T cd02510 225 IFR 227 (299)
T ss_pred ecc
Confidence 443
No 37
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.93 E-value=1.3e-25 Score=207.20 Aligned_cols=180 Identities=22% Similarity=0.265 Sum_probs=138.2
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGY 173 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~ 173 (534)
|+||+|||++.+.+||+|+.+|+||..+.+|+ |+|+|+|+|.+ ++++. +..+. ....++++|
T Consensus 1 VvIp~~ne~~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~---------~~~~~-------~~~~~-~~~~~~~~g 63 (183)
T cd06438 1 ILIPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQ---------VARAA-------GATVL-ERHDPERRG 63 (183)
T ss_pred CEEeccchHHHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHH---------HHHHc-------CCeEE-EeCCCCCCC
Confidence 68999999999999999999999986555554 45668888777 55432 22232 223345667
Q ss_pred ChhHHHHHHHhhh--ccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhh
Q 044519 174 KAGALKEGLEKQY--VKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSV 251 (534)
Q Consensus 174 Ka~aln~gl~~a~--~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 251 (534)
|++|+|.|++++. ..++|+++++|+|+.++|+++.+++..+.+ +.++|++.....+.+.++.++.+...+......
T Consensus 64 k~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~p~~l~~l~~~~~~--~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (183)
T cd06438 64 KGYALDFGFRHLLNLADDPDAVVVFDADNLVDPNALEELNARFAA--GARVVQAYYNSKNPDDSWITRLYAFAFLVFNRL 141 (183)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCChhHHHHHHHHHhh--CCCeeEEEEeeeCCccCHHHHHHHHHHHHHHHH
Confidence 9999999999872 236999999999999999999999999943 346788887777766678887776555444444
Q ss_pred hhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHH
Q 044519 252 EQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDL 294 (534)
Q Consensus 252 ~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l 294 (534)
.+......+....+.|+++++||+++++ |||++.+++||.|+
T Consensus 142 ~~~~~~~~~~~~~~~G~~~~~rr~~l~~-~g~~~~~l~ED~~~ 183 (183)
T cd06438 142 RPLGRSNLGLSCQLGGTGMCFPWAVLRQ-APWAAHSLTEDLEF 183 (183)
T ss_pred HHHHHHHcCCCeeecCchhhhHHHHHHh-CCCCCCCcccccCC
Confidence 4444444555566789999999999999 89999999999874
No 38
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.93 E-value=3.9e-25 Score=207.00 Aligned_cols=197 Identities=18% Similarity=0.271 Sum_probs=146.0
Q ss_pred CcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 91 PMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 91 P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
|++||+||+|||+ +.+++||+|+.+|++++.+++| |+|+|+|++.+ ++++.+.+ +..+++++.. +
T Consensus 1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~~~~eiiv-vd~gs~d~~~~--------~~~~~~~~----~~~~~~~~~~-~ 66 (202)
T cd04184 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPNWELCI-ADDASTDPEVK--------RVLKKYAA----QDPRIKVVFR-E 66 (202)
T ss_pred CeEEEEEecccCcHHHHHHHHHHHHhCcCCCeEEEE-EeCCCCChHHH--------HHHHHHHh----cCCCEEEEEc-c
Confidence 6799999999999 9999999999999998755433 55668887776 45544332 3456766644 4
Q ss_pred CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccch
Q 044519 170 RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHF 249 (534)
Q Consensus 170 ~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~ 249 (534)
.+.|++.++|.|++.+ ++||++++|+|+.++|++++++++.+.++|+++++.+.......+........ ...+
T Consensus 67 ~~~g~~~a~n~g~~~a---~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~~~ 139 (202)
T cd04184 67 ENGGISAATNSALELA---TGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDEDKIDEGGKRSEPFF----KPDW 139 (202)
T ss_pred cCCCHHHHHHHHHHhh---cCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEccHHhccCCCCEecccc----CCCC
Confidence 5566999999999998 99999999999999999999999998778899888776543322211110000 0000
Q ss_pred hhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCC-ccchHHHHHHHHhCCCEEEEeccCccc
Q 044519 250 SVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT-TVEDMDLAVRASLKGWKFVFVGDLGVK 314 (534)
Q Consensus 250 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~-~~ED~~l~~rl~~~G~ki~~~~~~~~~ 314 (534)
.... .....+.|+++++||++++++|||++.. .+||.|++.|+.++|+++.++|++...
T Consensus 140 ~~~~------~~~~~~~~~~~~~~r~~~~~iggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~~~~~ 199 (202)
T cd04184 140 SPDL------LLSQNYIGHLLVYRRSLVRQVGGFREGFEGAQDYDLVLRVSEHTDRIAHIPRVLYH 199 (202)
T ss_pred CHHH------hhhcCCccceEeEEHHHHHHhCCCCcCcccchhHHHHHHHHhccceEEEccHhhhh
Confidence 0000 0011245777899999999999998753 589999999999999999999987653
No 39
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.92 E-value=1.2e-24 Score=203.57 Aligned_cols=197 Identities=21% Similarity=0.258 Sum_probs=146.5
Q ss_pred EEEEeccCch--HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCC
Q 044519 94 LVQIPMYNEK--EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRN 171 (534)
Q Consensus 94 sViIP~yne~--~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~ 171 (534)
||+||+||++ +.+++||+|+.+|+|++.++ |+|+|+|++++.. ++++++.++ .+++++..+ .+
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~~ei-iivdd~ss~d~t~--------~~~~~~~~~-----~~i~~i~~~-~n 65 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPPDEV-VLVKDGPVTQSLN--------EVLEEFKRK-----LPLKVVPLE-KN 65 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCCcEE-EEEECCCCchhHH--------HHHHHHHhc-----CCeEEEEcC-cc
Confidence 6999999997 58999999999999997654 3366776454444 366655443 237777554 44
Q ss_pred CCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhh
Q 044519 172 GYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSV 251 (534)
Q Consensus 172 g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 251 (534)
.|+++|+|.|++++ +|||++++|+|++++|+++++++..+.++|+++++++.....+.+........ .. ......
T Consensus 66 ~G~~~a~N~g~~~a---~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~ 140 (201)
T cd04195 66 RGLGKALNEGLKHC---TYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIGKRR-LP-TSHDDI 140 (201)
T ss_pred ccHHHHHHHHHHhc---CCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeecccc-CC-CCHHHH
Confidence 56999999999998 99999999999999999999999999888999999998776544332111000 00 000000
Q ss_pred hhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCccc
Q 044519 252 EQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVK 314 (534)
Q Consensus 252 ~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 314 (534)
... ......+.++++++||++++++|||++....||+++..|+..+|+++.++|++.++
T Consensus 141 ~~~----~~~~~~~~~~~~~~rr~~~~~~g~~~~~~~~eD~~~~~r~~~~g~~~~~~~~~~~~ 199 (201)
T cd04195 141 LKF----ARRRSPFNHPTVMFRKSKVLAVGGYQDLPLVEDYALWARMLANGARFANLPEILVK 199 (201)
T ss_pred HHH----hccCCCCCChHHhhhHHHHHHcCCcCCCCCchHHHHHHHHHHcCCceecccHHHhh
Confidence 000 00111245778899999999999999888899999999999999999999987754
No 40
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.92 E-value=8.8e-25 Score=202.91 Aligned_cols=179 Identities=21% Similarity=0.278 Sum_probs=140.6
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec--CCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK--NRNG 172 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~--~~~g 172 (534)
|+||+|||++.+.+||+|+.+|+ |+.++ |+|+|+|+|+|.+ +++ . + ..+.+++++.+. +.++
T Consensus 1 ViIp~~Ne~~~l~~~l~sl~~~~-~~~eI-ivvdd~S~D~t~~---------~~~-~-~---~~~~~v~~i~~~~~~~~~ 64 (191)
T cd06436 1 VLVPCLNEEAVIQRTLASLLRNK-PNFLV-LVIDDASDDDTAG---------IVR-L-A---ITDSRVHLLRRHLPNART 64 (191)
T ss_pred CEEeccccHHHHHHHHHHHHhCC-CCeEE-EEEECCCCcCHHH---------HHh-h-e---ecCCcEEEEeccCCcCCC
Confidence 68999999999999999999999 65443 3255668888777 554 1 1 123567777543 3456
Q ss_pred CChhHHHHHHHhhhc--------cCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhh
Q 044519 173 YKAGALKEGLEKQYV--------KDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMS 244 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~--------~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~ 244 (534)
||++|+|.|++.+.. .++|+|+++|+|+.++|++|+++...+ ++|+++++++.....|.+.++.+++|.++
T Consensus 65 Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~~~~~~~e 143 (191)
T cd06436 65 GKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLDPNALEAVAPYF-SDPRVAGTQSRVRMYNRHKNLLTILQDLE 143 (191)
T ss_pred CHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcCHhHHHHHHHhh-cCCceEEEeeeEEEecCCCCHHHHHHHHH
Confidence 799999999998621 124899999999999999999988877 78999999999999998889999999888
Q ss_pred cccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCC--Cccch
Q 044519 245 LDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR--TTVED 291 (534)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~--~~~ED 291 (534)
+...+...+..+...+. ..+.|++.++||++++++|||++. +++||
T Consensus 144 ~~~~~~~~~~~~~~~~~-~~~~G~~~~~r~~~l~~vgg~~~~~~~~~ED 191 (191)
T cd06436 144 FFIIIAATQSLRALTGT-VGLGGNGQFMRLSALDGLIGEEPWSDSLLED 191 (191)
T ss_pred HHHHHHHHHHHHHhcCc-EEECCeeEEEeHHHHHHhhcCCCCchhhcCC
Confidence 77666566665555443 457899999999999999776653 78888
No 41
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.90 E-value=1e-22 Score=190.02 Aligned_cols=192 Identities=18% Similarity=0.222 Sum_probs=142.6
Q ss_pred EEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCC
Q 044519 94 LVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGY 173 (534)
Q Consensus 94 sViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~ 173 (534)
||+||+||+++.+++||+|+.+|++++.+++| |+|+|+|++.+ .+++...+ +.++.. .+++|
T Consensus 1 sivi~~~n~~~~l~~~l~sl~~q~~~~~eviv-vDd~s~d~~~~---------~~~~~~~~-------~~~~~~-~~~~g 62 (202)
T cd06433 1 SIITPTYNQAETLEETIDSVLSQTYPNIEYIV-IDGGSTDGTVD---------IIKKYEDK-------ITYWIS-EPDKG 62 (202)
T ss_pred CEEEeccchHHHHHHHHHHHHhCCCCCceEEE-EeCCCCccHHH---------HHHHhHhh-------cEEEEe-cCCcC
Confidence 68999999999999999999999998754322 55557887766 65543221 233323 45567
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhh
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQ 253 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 253 (534)
++.|+|.|++.+ ++||++++|+|+.+.++++.+++..+.++++.+++.|.....+.+........ .....
T Consensus 63 ~~~a~n~~~~~a---~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~----~~~~~--- 132 (202)
T cd06433 63 IYDAMNKGIALA---TGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRVIGRRR----PPPFL--- 132 (202)
T ss_pred HHHHHHHHHHHc---CCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEeeeEEEcCCCCcccCCC----Ccchh---
Confidence 999999999999 99999999999999999999999777688999999998876554332211110 00000
Q ss_pred hcccccCccccccCCcchhhHHHHHHhCCCCCC-CccchHHHHHHHHhCCCEEEEeccCcccc
Q 044519 254 EVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR-TTVEDMDLAVRASLKGWKFVFVGDLGVKN 315 (534)
Q Consensus 254 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~~ 315 (534)
.........+.++++++||++++++|+|++. ..+||.+++.|+.++|+++.+.|++.++.
T Consensus 133 --~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~~~~~~ 193 (202)
T cd06433 133 --DKFLLYGMPICHQATFFRRSLFEKYGGFDESYRIAADYDLLLRLLLAGKIFKYLPEVLAAF 193 (202)
T ss_pred --hhHHhhcCcccCcceEEEHHHHHHhCCCchhhCchhhHHHHHHHHHcCCceEecchhhhhh
Confidence 0011111234677889999999999999875 45899999999999999999999887653
No 42
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.89 E-value=9.5e-23 Score=195.89 Aligned_cols=202 Identities=21% Similarity=0.261 Sum_probs=139.3
Q ss_pred EEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCC
Q 044519 95 VQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGY 173 (534)
Q Consensus 95 ViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~ 173 (534)
++||+|||+ +.+.+||+|+.+|. . +|+|+||++|++.. +..+ . ...+++++..+ .+.|
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q~---~--~iivvDn~s~~~~~--------~~~~-~------~~~~i~~i~~~-~n~G 59 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQV---D--KVVVVDNSSGNDIE--------LRLR-L------NSEKIELIHLG-ENLG 59 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhccC---C--EEEEEeCCCCccHH--------HHhh-c------cCCcEEEEECC-Ccee
Confidence 589999999 99999999999982 2 35567776666555 2221 1 23567777554 4555
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHH---HHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchh
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTI---PYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFS 250 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv---~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~ 250 (534)
+++|+|.|++.+...++||++++|+|+.++|++|.+++ ..+.++++++++++.....+.... ....+... ....
T Consensus 60 ~~~a~N~g~~~a~~~~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~ 136 (237)
T cd02526 60 IAKALNIGIKAALENGADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGEN-SPGVRKSG--YKLR 136 (237)
T ss_pred hHHhhhHHHHHHHhCCCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCee-ccceeccC--ccce
Confidence 99999999999822234999999999999999999994 555567788887776543332211 11111000 0000
Q ss_pred hhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEeccCcccccCCcC
Q 044519 251 VEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFVGDLGVKNELPST 320 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t 320 (534)
................|+++++||++++++|||++... .||.|++.|+.++|+++.++|++.+++..+.+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~~~v~h~~~~~ 208 (237)
T cd02526 137 IQKEGEEGLKEVDFLITSGSLISLEALEKVGGFDEDLFIDYVDTEWCLRARSKGYKIYVVPDAVLKHELGDK 208 (237)
T ss_pred ecccccCCceEeeeeeccceEEcHHHHHHhCCCCHHHcCccchHHHHHHHHHcCCcEEEEcCeEEEecccCc
Confidence 00000111111122357889999999999999998653 68999999999999999999999998887765
No 43
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.89 E-value=1.3e-22 Score=188.73 Aligned_cols=142 Identities=32% Similarity=0.494 Sum_probs=125.1
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcch
Q 044519 192 FVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGV 271 (534)
Q Consensus 192 ~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 271 (534)
||+++|+|+.++||+++++++.+. +|+++++|++....+ .+++.++.|..++.......+...+..+....++|++++
T Consensus 1 ~v~~~DaDt~~~~d~l~~~~~~~~-~~~~~~vq~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 78 (193)
T PF13632_consen 1 YVLFLDADTRLPPDFLERLVAALE-DPKVDAVQGPIIFRN-RGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGSGML 78 (193)
T ss_pred CEEEEcCCCCCChHHHHHHHHHHh-CCCceEEEccEEecC-CCChhheeehhhhhhhhhhhHHHHHhcCCCccccCccee
Confidence 689999999999999999999995 899999999999864 468888888877654444434444455666668899999
Q ss_pred hhHHHHHHhCCCC-CCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHHHhhhccch
Q 044519 272 WRIQAIEDAGGWK-DRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCGP 335 (534)
Q Consensus 272 ~Rr~~l~~~Gg~~-~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~ 335 (534)
+|+++++++|||+ ....+||.|++.++.++||++.++|++.++++.|.|++++.+||+||.+|.
T Consensus 79 ~r~~~l~~vg~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 79 FRREALREVGGFDDPFSIGEDMDLGFRLRRAGYRIVYVPDAIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred eeHHHHHHhCcccccccccchHHHHHHHHHCCCEEEEecccceeeeCCCCHHHHHHHHHHHHhhh
Confidence 9999999999999 788899999999999999999999999999999999999999999999997
No 44
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.89 E-value=1.7e-22 Score=190.66 Aligned_cols=199 Identities=19% Similarity=0.109 Sum_probs=143.8
Q ss_pred EEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCC
Q 044519 94 LVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGY 173 (534)
Q Consensus 94 sViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~ 173 (534)
||+||+|||++.+.+||+|+++|+||+.+++| |+|+|+|+|.+ ++++..+++ +..+.+. +.+.+.|
T Consensus 1 sIvIp~yn~~~~l~~~l~sl~~q~~~~~eiiV-vddgS~d~t~~---------~~~~~~~~~---~~~~~~~-~~~~~~G 66 (214)
T cd04196 1 AVLMATYNGEKYLREQLDSILAQTYKNDELII-SDDGSTDGTVE---------IIKEYIDKD---PFIIILI-RNGKNLG 66 (214)
T ss_pred CEEEEecCcHHHHHHHHHHHHhCcCCCeEEEE-EeCCCCCCcHH---------HHHHHHhcC---CceEEEE-eCCCCcc
Confidence 68999999999999999999999999644333 55668888776 776665442 1234444 4556667
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhh
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQ 253 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 253 (534)
+++++|.|++.+ ++|||+++|+|+.++|++|.+++..+.++++.+++++.....+.+........... .......
T Consensus 67 ~~~~~n~g~~~~---~g~~v~~ld~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 141 (214)
T cd04196 67 VARNFESLLQAA---DGDYVFFCDQDDIWLPDKLERLLKAFLKDDKPLLVYSDLELVDENGNPIGESFFEY--QKIKPGT 141 (214)
T ss_pred HHHHHHHHHHhC---CCCEEEEECCCcccChhHHHHHHHHHhcCCCceEEecCcEEECCCCCCcccccccc--cccCCcc
Confidence 999999999998 99999999999999999999999996688899999998665544332211111000 0000000
Q ss_pred hcccccCccccccCCcchhhHHHHHHhCCCCCC-CccchHHHHHHHHhCCCEEEEeccCcc
Q 044519 254 EVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR-TTVEDMDLAVRASLKGWKFVFVGDLGV 313 (534)
Q Consensus 254 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~ 313 (534)
. .........+.|+++++||++++++|++++. ...||.++..++.. |.++.++|++.+
T Consensus 142 ~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~~~~ 200 (214)
T cd04196 142 S-FNNLLFQNVVTGCTMAFNRELLELALPFPDADVIMHDWWLALLASA-FGKVVFLDEPLI 200 (214)
T ss_pred C-HHHHHHhCccCCceeeEEHHHHHhhccccccccccchHHHHHHHHH-cCceEEcchhHH
Confidence 0 0001111234688999999999999999887 67899999988877 668999988765
No 45
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.89 E-value=2.7e-22 Score=187.95 Aligned_cols=177 Identities=20% Similarity=0.206 Sum_probs=141.8
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYK 174 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~K 174 (534)
|+||+|||++.+++||+|+++|++|..+++| |+|+|+|+|.+ .+++..+. .++++++.+ .+.|.
T Consensus 1 viI~~~n~~~~l~~~l~sl~~q~~~~~eiii-vD~~s~d~t~~---------~~~~~~~~-----~~i~~~~~~-~n~g~ 64 (202)
T cd04185 1 AVVVTYNRLDLLKECLDALLAQTRPPDHIIV-IDNASTDGTAE---------WLTSLGDL-----DNIVYLRLP-ENLGG 64 (202)
T ss_pred CEEEeeCCHHHHHHHHHHHHhccCCCceEEE-EECCCCcchHH---------HHHHhcCC-----CceEEEECc-cccch
Confidence 6899999999999999999999999765433 66678888777 66554322 236676554 44458
Q ss_pred hhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhh
Q 044519 175 AGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQE 254 (534)
Q Consensus 175 a~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 254 (534)
+.++|.|++.+...++|+++++|+|++++|+++++++..+ ++++++++.+.....+.
T Consensus 65 ~~~~n~~~~~a~~~~~d~v~~ld~D~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~---------------------- 121 (202)
T cd04185 65 AGGFYEGVRRAYELGYDWIWLMDDDAIPDPDALEKLLAYA-DKDNPQFLAPLVLDPDG---------------------- 121 (202)
T ss_pred hhHHHHHHHHHhccCCCEEEEeCCCCCcChHHHHHHHHHH-hcCCceEecceeEcCCC----------------------
Confidence 8899999987644579999999999999999999999999 48888888776433221
Q ss_pred cccccCccccccCCcchhhHHHHHHhCCCCCC--CccchHHHHHHHHhCCCEEEEeccCcccccCCcCHH
Q 044519 255 VGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR--TTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFK 322 (534)
Q Consensus 255 ~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~--~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~ 322 (534)
+++++++||+.++++|++++. ..+||.+++.|+.++|+++ ++|++.+++..+.+..
T Consensus 122 -----------~~~~~~~~~~~~~~~g~~~~~~~~~~eD~~~~~r~~~~G~~i-~~~~~~~~h~~~~~~~ 179 (202)
T cd04185 122 -----------SFVGVLISRRVVEKIGLPDKEFFIWGDDTEYTLRASKAGPGI-YVPDAVVVHKTAINKG 179 (202)
T ss_pred -----------ceEEEEEeHHHHHHhCCCChhhhccchHHHHHHHHHHcCCcE-EecceEEEEccccccc
Confidence 245678999999999998874 3589999999999999999 9999999888876543
No 46
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.89 E-value=7.5e-22 Score=190.51 Aligned_cols=209 Identities=19% Similarity=0.133 Sum_probs=145.0
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcC--CCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGL--SWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKY 164 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q--~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~ 164 (534)
...|+|||+||+|||++.+..+++++.++ ++++ ++|+ |+|+|+|+|.+ ++++..++++ ..++.+
T Consensus 6 ~~~~~vsVvIp~yne~~~l~~~l~~l~~~~~~~~~--~eiivvDdgS~D~t~~---------i~~~~~~~~~--~~~v~~ 72 (243)
T PLN02726 6 EGAMKYSIIVPTYNERLNIALIVYLIFKALQDVKD--FEIIVVDDGSPDGTQD---------VVKQLQKVYG--EDRILL 72 (243)
T ss_pred CCCceEEEEEccCCchhhHHHHHHHHHHHhccCCC--eEEEEEeCCCCCCHHH---------HHHHHHHhcC--CCcEEE
Confidence 34689999999999999999999998653 3333 4444 45568888877 7766555431 235556
Q ss_pred EEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC-C--chhhHhH
Q 044519 165 ETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNAD-E--CLMTRLQ 241 (534)
Q Consensus 165 ~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~-~--~~~~~~~ 241 (534)
+.+ +++.|+++|+|.|++.+ ++||++++|+|+.++|++|.++++.+ .+++.++|.|.....+.. . .+..+..
T Consensus 73 ~~~-~~n~G~~~a~n~g~~~a---~g~~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~g~r~~~~~~~~~~~~~r~~~ 147 (243)
T PLN02726 73 RPR-PGKLGLGTAYIHGLKHA---SGDFVVIMDADLSHHPKYLPSFIKKQ-RETGADIVTGTRYVKGGGVHGWDLRRKLT 147 (243)
T ss_pred Eec-CCCCCHHHHHHHHHHHc---CCCEEEEEcCCCCCCHHHHHHHHHHH-HhcCCcEEEEccccCCCCcCCccHHHHHH
Confidence 543 44556999999999998 99999999999999999999999998 556788888865433221 1 1211211
Q ss_pred hhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCC-CCccchHHHHHHHHhCCCEEEEeccCcccccCCc
Q 044519 242 EMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD-RTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPS 319 (534)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~-~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~ 319 (534)
...... ......+ .......|++.++||+++++++.+.+ ....+|.|++.++.++|+++..+|.....+...+
T Consensus 148 ~~~~~~--~~~~~~~---~~~~d~~g~~~~~rr~~~~~i~~~~~~~~~~~~~el~~~~~~~g~~i~~vp~~~~~r~~g~ 221 (243)
T PLN02726 148 SRGANV--LAQTLLW---PGVSDLTGSFRLYKRSALEDLVSSVVSKGYVFQMEIIVRASRKGYRIEEVPITFVDRVYGE 221 (243)
T ss_pred HHHHHH--HHHHHhC---CCCCcCCCcccceeHHHHHHHHhhccCCCcEEehHHHHHHHHcCCcEEEeCcEEeCCCCCc
Confidence 100000 0000011 12233568889999999999976543 4567899999999999999999998776544333
No 47
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=99.89 E-value=1.1e-21 Score=205.36 Aligned_cols=289 Identities=20% Similarity=0.341 Sum_probs=176.5
Q ss_pred ccEEEEEecCCCC----CChhHHHHHHHhhhc-cCCcEEEEecCCCC-CCHHHHHHHHHHHhcCCc----EEEEeeeeEe
Q 044519 160 VNVKYETRKNRNG----YKAGALKEGLEKQYV-KDCQFVVIFDADFQ-PDEDFLWRTIPYLLENKE----LGLVQARWKF 229 (534)
Q Consensus 160 ~~v~~~~r~~~~g----~Ka~aln~gl~~a~~-~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~----v~~V~~~~~~ 229 (534)
+++.|+.|+++.+ .||||+|..++.+.. .+++||+.+|+|.. .+|+.+++.+..| -||+ ++.||.++++
T Consensus 166 P~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~-~d~~~g~~~~~vQfpq~f 244 (720)
T PF03552_consen 166 PMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFF-MDPKIGKKIAFVQFPQRF 244 (720)
T ss_pred CeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhh-ccCCCCCeeEEEeCCcee
Confidence 4567888887765 699999999986533 68999999999985 4999999999998 5665 9999999999
Q ss_pred ecCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHh-----------------------------
Q 044519 230 VNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDA----------------------------- 280 (534)
Q Consensus 230 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~----------------------------- 280 (534)
.|-+.+-.-.-+ ....+..... +.+...-+.+.|+++++||+++-..
T Consensus 245 ~~i~~~d~y~~~---~~~~~~~~~~-g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~ 320 (720)
T PF03552_consen 245 DGIDKNDRYGNQ---NRVFFDINMR-GLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSK 320 (720)
T ss_pred CCCCcCCCCCcc---ceeeeecccc-ccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCccccccc
Confidence 876443110000 1111222221 2222223334566666666555210
Q ss_pred -------------------------------------------------------------C------------------
Q 044519 281 -------------------------------------------------------------G------------------ 281 (534)
Q Consensus 281 -------------------------------------------------------------G------------------ 281 (534)
|
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~~~L~EA~~V 400 (720)
T PF03552_consen 321 KKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGVPRSPSPASLLEEAIHV 400 (720)
T ss_pred ccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCCCCCCChHHHHHHHHHH
Confidence 0
Q ss_pred ---------------CCCCCCccchHHHHHHHHhCCCEEEEecc--CcccccCCcCHHHHHHHHhhhccchhhHHhhhhh
Q 044519 282 ---------------GWKDRTTVEDMDLAVRASLKGWKFVFVGD--LGVKNELPSTFKAYRYQQHRWSCGPSNLFSKMTR 344 (534)
Q Consensus 282 ---------------g~~~~~~~ED~~l~~rl~~~G~ki~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~ 344 (534)
||--.+++||...++++|.+|||.+|+.. ....+.+|.++.+...|++||+.|.+|++.....
T Consensus 401 ~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~ 480 (720)
T PF03552_consen 401 ASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHC 480 (720)
T ss_pred hcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCC
Confidence 11112368999999999999999999964 3467899999999999999999999999874445
Q ss_pred hhhhc--CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-cccchh----HHHHHHHHHHHHHHH-Hh---
Q 044519 345 EIILC--ERVSVWKRLYLIYAFFIVRKIIAHWVTFFFYCIVIPTSVLV-PEIQLT----KPIAIYIPATITLLN-AV--- 413 (534)
Q Consensus 345 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~-~~~~~~----~~~~~~l~~~~~~~~-~~--- 413 (534)
.++.. +++++.+++.++...++. + ..+..+.|++ +|.+.++ +....| .|.++++++++++.. .+
T Consensus 481 Pl~~g~~~rL~~lQrLaY~~~~~yp---l-~Sipll~Y~~-lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~ 555 (720)
T PF03552_consen 481 PLWYGYGGRLKFLQRLAYLNYMLYP---L-TSIPLLCYCF-LPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEF 555 (720)
T ss_pred chhccCCCCCcHHHHHHHHHHhhhH---H-HHHHHHHHHH-hHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHH
Confidence 55554 688999998866433321 1 1122334433 4555444 322222 123333333322211 11
Q ss_pred -hcc---chhH-HHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCceEEcccCCC
Q 044519 414 -CTP---RSFH-LIVFWILFENVMSLLRAKAAIIGLLEA--NRVNEWVVTEKHGN 461 (534)
Q Consensus 414 -~~~---~~~~-~~~~~~l~~~~~~~~~~~a~l~gl~~~--~~~~~~~~T~K~~~ 461 (534)
... +.+. --.+|.+.. .-....|++.++++. +++..|.+|+|..+
T Consensus 556 ~wsG~si~~WWrnQq~W~I~~---tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~d 607 (720)
T PF03552_consen 556 RWSGVSIREWWRNQQFWMIGG---TSAHLFAVLQGILKVLGGSETSFTVTSKVSD 607 (720)
T ss_pred HhccCcHHHhhcccceeeehh---hHHHHHHHHHHHHHHHcCCccceeecccccc
Confidence 001 1111 112332211 112234566666665 78999999999876
No 48
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.88 E-value=7.2e-22 Score=181.67 Aligned_cols=176 Identities=21% Similarity=0.216 Sum_probs=131.2
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYK 174 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~K 174 (534)
|+||+||+++.+++||+|+.+|++++.+++| |+|+|+|++.+ ++++..+.. +.++..+.+.+.+.++
T Consensus 1 ivip~~n~~~~l~~~l~sl~~q~~~~~eiiv-vdd~s~d~t~~---------~~~~~~~~~---~~~~~~~~~~~~~~~~ 67 (182)
T cd06420 1 LIITTYNRPEALELVLKSVLNQSILPFEVII-ADDGSTEETKE---------LIEEFKSQF---PIPIKHVWQEDEGFRK 67 (182)
T ss_pred CEEeecCChHHHHHHHHHHHhccCCCCEEEE-EeCCCchhHHH---------HHHHHHhhc---CCceEEEEcCCcchhH
Confidence 6899999999999999999999988766443 56668887766 665543321 2344444444444468
Q ss_pred hhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhh
Q 044519 175 AGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQE 254 (534)
Q Consensus 175 a~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 254 (534)
++++|.|++.+ ++||++++|+|+.++|++|+++++.+ ++++.+++++.. .+.+...
T Consensus 68 ~~~~n~g~~~a---~g~~i~~lD~D~~~~~~~l~~~~~~~--~~~~~v~g~~~~-~~~~~~~------------------ 123 (182)
T cd06420 68 AKIRNKAIAAA---KGDYLIFIDGDCIPHPDFIADHIELA--EPGVFLSGSRVL-LNEKLTE------------------ 123 (182)
T ss_pred HHHHHHHHHHh---cCCEEEEEcCCcccCHHHHHHHHHHh--CCCcEEecceee-cccccce------------------
Confidence 99999999999 99999999999999999999999987 566665555443 2222110
Q ss_pred cccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEe-ccCcccc
Q 044519 255 VGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFV-GDLGVKN 315 (534)
Q Consensus 255 ~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~-~~~~~~~ 315 (534)
..+.|++++++|+.+.++|||++... .||.|++.|+.++|++...+ +++.++|
T Consensus 124 --------~~~~~~~~~~~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~~~~~~h 180 (182)
T cd06420 124 --------RGIRGCNMSFWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGIKFRKLKFAAIVFH 180 (182)
T ss_pred --------eEeccceEEEEHHHHHHhCCCCcccccCCcchHHHHHHHHHcCCcEEEecccceeee
Confidence 22357788899999999999998543 69999999999999555544 4666654
No 49
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.88 E-value=1.8e-21 Score=185.33 Aligned_cols=203 Identities=17% Similarity=0.119 Sum_probs=140.1
Q ss_pred EEEeccCchHHHHHHHHHHHcCCC-CCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSW-PSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGY 173 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~y-p~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~ 173 (534)
|+||+|||++.+.++|+|+.+|.+ ++.++ |+|+|+|+|++.+ +++++.++ ..+++++.. +.++|
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~ei-iiVDd~S~d~t~~---------~~~~~~~~----~~~i~~~~~-~~n~G 65 (224)
T cd06442 1 IIIPTYNERENIPELIERLDAALKGIDYEI-IVVDDNSPDGTAE---------IVRELAKE----YPRVRLIVR-PGKRG 65 (224)
T ss_pred CeEeccchhhhHHHHHHHHHHhhcCCCeEE-EEEeCCCCCChHH---------HHHHHHHh----CCceEEEec-CCCCC
Confidence 689999999999999999999998 44333 3255668888876 66554433 455666644 45666
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC-CchhhHhHhhhcccchhhh
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNAD-ECLMTRLQEMSLDYHFSVE 252 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~-~~~~~~~~~~~~~~~~~~~ 252 (534)
+++|+|.|++.| ++|+++++|+|+.++|+++..+++.+ .+++.++|.|........ .++............. ..
T Consensus 66 ~~~a~n~g~~~a---~gd~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 140 (224)
T cd06442 66 LGSAYIEGFKAA---RGDVIVVMDADLSHPPEYIPELLEAQ-LEGGADLVIGSRYVEGGGVEGWGLKRKLISRGANL-LA 140 (224)
T ss_pred hHHHHHHHHHHc---CCCEEEEEECCCCCCHHHHHHHHHHH-hcCCCCEEEEeeeecCCccCCCcHHHHHHHHHHHH-HH
Confidence 999999999999 99999999999999999999999997 455666676654433221 1110000000000000 00
Q ss_pred hhcccccCccccccCCcchhhHHHHHHhC-CCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCc
Q 044519 253 QEVGSSTCQFFGFNGTAGVWRIQAIEDAG-GWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPS 319 (534)
Q Consensus 253 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G-g~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~ 319 (534)
+.. .........|++.++||++++++| ++......+|.|++.++.+.|+++.++|.....+..-.
T Consensus 141 ~~~--~~~~~~~~~~~~~~~~r~~~~~ig~~~~~~~~~~~~~l~~~~~~~g~~i~~~p~~~~~~~~g~ 206 (224)
T cd06442 141 RLL--LGRKVSDPTSGFRAYRREVLEKLIDSLVSKGYKFQLELLVRARRLGYRIVEVPITFVDREHGE 206 (224)
T ss_pred HHH--cCCCCCCCCCccchhhHHHHHHHhhhccCCCcEEeHHHHHHHHHcCCeEEEeCeEEeccCCCc
Confidence 000 112223356888899999999998 55555667889999999999999999998766544433
No 50
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.88 E-value=4.9e-22 Score=179.34 Aligned_cols=163 Identities=21% Similarity=0.330 Sum_probs=137.0
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYK 174 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~K 174 (534)
|+||+||+++.+.++++|+.+|++++.+++| ++|+|+|++.+ .+++. ..+++++..+ .+.|+
T Consensus 1 vii~~~~~~~~l~~~l~sl~~~~~~~~~iii-vdd~s~~~~~~---------~~~~~-------~~~~~~~~~~-~~~g~ 62 (166)
T cd04186 1 IIIVNYNSLEYLKACLDSLLAQTYPDFEVIV-VDNASTDGSVE---------LLREL-------FPEVRLIRNG-ENLGF 62 (166)
T ss_pred CEEEecCCHHHHHHHHHHHHhccCCCeEEEE-EECCCCchHHH---------HHHHh-------CCCeEEEecC-CCcCh
Confidence 6899999999999999999999987655433 66667777666 44322 1256666443 45569
Q ss_pred hhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhh
Q 044519 175 AGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQE 254 (534)
Q Consensus 175 a~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 254 (534)
++|+|.|++.+ ++|+++++|+|+.++|+++.+++..+..+++++++++.
T Consensus 63 ~~a~n~~~~~~---~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------- 111 (166)
T cd04186 63 GAGNNQGIREA---KGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK---------------------------- 111 (166)
T ss_pred HHHhhHHHhhC---CCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc----------------------------
Confidence 99999999999 99999999999999999999999988788899888777
Q ss_pred cccccCccccccCCcchhhHHHHHHhCCCCCCC--ccchHHHHHHHHhCCCEEEEeccCccccc
Q 044519 255 VGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT--TVEDMDLAVRASLKGWKFVFVGDLGVKNE 316 (534)
Q Consensus 255 ~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~--~~ED~~l~~rl~~~G~ki~~~~~~~~~~~ 316 (534)
..|+++++|+++++++|||++.. .+||.+++.|+.++|+++.+.|+..++++
T Consensus 112 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~~~~~h~ 165 (166)
T cd04186 112 ----------VSGAFLLVRREVFEEVGGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQAVIYHH 165 (166)
T ss_pred ----------CceeeEeeeHHHHHHcCCCChhhhccccHHHHHHHHHHcCCeEEEccceEEEec
Confidence 46899999999999999999854 57999999999999999999999987764
No 51
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.88 E-value=7.2e-22 Score=179.31 Aligned_cols=180 Identities=32% Similarity=0.481 Sum_probs=131.5
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYK 174 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~K 174 (534)
|+||+||+++.+.+||+|+.+|.++..+++| |+|+|+|++.+ .+++...+. ...+.++ +..++.|+
T Consensus 1 Viip~~n~~~~l~~~l~sl~~q~~~~~~iiv-vdd~s~d~t~~---------~~~~~~~~~---~~~~~~~-~~~~~~g~ 66 (180)
T cd06423 1 IIVPAYNEEAVIERTIESLLALDYPKLEVIV-VDDGSTDDTLE---------ILEELAALY---IRRVLVV-RDKENGGK 66 (180)
T ss_pred CeecccChHHHHHHHHHHHHhCCCCceEEEE-EeCCCccchHH---------HHHHHhccc---cceEEEE-EecccCCc
Confidence 6899999999999999999999997655433 55667777766 554433221 1334445 34456679
Q ss_pred hhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhh
Q 044519 175 AGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQE 254 (534)
Q Consensus 175 a~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 254 (534)
+.++|.|++.+ ++|+++++|+|+.++|+++++++..+.++++++++++.....+...++..................
T Consensus 67 ~~~~n~~~~~~---~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
T cd06423 67 AGALNAGLRHA---KGDIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRVRVRNGSENLLTRLQAIEYLSIFRLGRR 143 (180)
T ss_pred hHHHHHHHHhc---CCCEEEEECCCCCcChHHHHHHHHHhccCCCeeeEeeeEEEecCcCcceeccchheecceeeeeee
Confidence 99999999998 999999999999999999999977776889999999998776654344333332222211111111
Q ss_pred cccccCccccccCCcchhhHHHHHHhCCCCCCCccch
Q 044519 255 VGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVED 291 (534)
Q Consensus 255 ~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED 291 (534)
..........++|+++++||++++++|||++..++||
T Consensus 144 ~~~~~~~~~~~~g~~~~~~~~~~~~~ggf~~~~~~eD 180 (180)
T cd06423 144 AQSALGGVLVLSGAFGAFRREALREVGGWDEDTLTED 180 (180)
T ss_pred hhheecceeecCchHHHHHHHHHHHhCCccccCcCCC
Confidence 1112333455789999999999999999999999998
No 52
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.88 E-value=1.3e-21 Score=196.20 Aligned_cols=202 Identities=17% Similarity=0.206 Sum_probs=140.0
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
..|.|||+||+||+++.+++||+|+++|+|++.+++| |+|+|+|++.+ ++++++++ ..++++++.
T Consensus 4 ~~p~vSVIIP~yN~~~~L~~~l~Sl~~Qt~~~~EIIi-VdDgStD~t~~---------i~~~~~~~----~~~i~vi~~- 68 (328)
T PRK10073 4 STPKLSIIIPLYNAGKDFRAFMESLIAQTWTALEIII-VNDGSTDNSVE---------IAKHYAEN----YPHVRLLHQ- 68 (328)
T ss_pred CCCeEEEEEeccCCHHHHHHHHHHHHhCCCCCeEEEE-EeCCCCccHHH---------HHHHHHhh----CCCEEEEEC-
Confidence 3589999999999999999999999999998766443 67779998877 77665543 467887743
Q ss_pred CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeee--EeecCCCch--h--hHhHh
Q 044519 169 NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARW--KFVNADECL--M--TRLQE 242 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~--~~~n~~~~~--~--~~~~~ 242 (534)
.++|.+.|+|.|++.| +||||+++|+|+.++|++++++++.+. +++.+++.+.. ...+..... . .+...
T Consensus 69 -~n~G~~~arN~gl~~a---~g~yi~flD~DD~~~p~~l~~l~~~~~-~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (328)
T PRK10073 69 -ANAGVSVARNTGLAVA---TGKYVAFPDADDVVYPTMYETLMTMAL-EDDLDVAQCNADWCFRDTGETWQSIPSDRLRS 143 (328)
T ss_pred -CCCChHHHHHHHHHhC---CCCEEEEECCCCccChhHHHHHHHHHH-hCCCCEEEEccEEEEeCCCccccccccccccc
Confidence 4677999999999999 999999999999999999999999874 34444444332 222211100 0 00000
Q ss_pred hh-cccchhhhhhcccccCccccccCCcchhhHHHHHHhC-CCCCCCccchHHHHHHHHhCCCEEEEeccCcc
Q 044519 243 MS-LDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG-GWKDRTTVEDMDLAVRASLKGWKFVFVGDLGV 313 (534)
Q Consensus 243 ~~-~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G-g~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~ 313 (534)
.. +............ ........+.++||+.+++.| .|++....||.++..++..++.++.+++++..
T Consensus 144 ~~~~~~~~~l~~~l~~---~~~~~~~~~~l~Rr~~l~~~~~~f~~~~~~eD~~~~~~~~~~~~~v~~~~~~ly 213 (328)
T PRK10073 144 TGVLSGPDWLRMALSS---RRWTHVVWLGVYRRDFIVKNNIKFEPGLHHQDIPWTTEVMFNALRVRYTEQSLY 213 (328)
T ss_pred cceechHHHHHHHHhh---CCCCccHhHHHHHHHHHHHcCCccCCCCEeccHHHHHHHHHHCCEEEEECCCEE
Confidence 00 0000000000000 001112345799999999987 36666668999999999999999999998764
No 53
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.88 E-value=2.1e-21 Score=184.41 Aligned_cols=200 Identities=13% Similarity=0.046 Sum_probs=135.4
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec---CC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK---NR 170 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~---~~ 170 (534)
|+||+||+++.+++||+|+.+|+||+. .+|+ |+|+|+|+|.+ +++++.++++ ..+++++... +.
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~-~eiiVvDd~S~d~t~~---------i~~~~~~~~~--~~~~~~~~~~~~~~~ 68 (219)
T cd06913 1 IILPVHNGEQWLDECLESVLQQDFEGT-LELSVFNDASTDKSAE---------IIEKWRKKLE--DSGVIVLVGSHNSPS 68 (219)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCCCCC-EEEEEEeCCCCccHHH---------HHHHHHHhCc--ccCeEEEEecccCCC
Confidence 689999999999999999999999842 3444 55568888877 7777665543 2345555332 23
Q ss_pred CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCc-hhhHhHhhhcccch
Q 044519 171 NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADEC-LMTRLQEMSLDYHF 249 (534)
Q Consensus 171 ~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~-~~~~~~~~~~~~~~ 249 (534)
+.|.+.|+|.|++.+ +|||++++|+|+.++|+++.+++..+.+++. +++++.......+.. ...+... ......
T Consensus 69 ~~G~~~a~N~g~~~a---~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~ 143 (219)
T cd06913 69 PKGVGYAKNQAIAQS---SGRYLCFLDSDDVMMPQRIRLQYEAALQHPN-SIIGCQVRRIPEDSTERYTRWIN-TLTREQ 143 (219)
T ss_pred CccHHHHHHHHHHhc---CCCEEEEECCCccCChhHHHHHHHHHHhCCC-cEEEEEEEecCcccchhhHHHHH-hcCHHH
Confidence 346899999999998 9999999999999999999999888866654 345444332222111 1111110 000000
Q ss_pred hhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCC--ccchHHHHHHHHhCCCEEEEeccCccc
Q 044519 250 SVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT--TVEDMDLAVRASLKGWKFVFVGDLGVK 314 (534)
Q Consensus 250 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~--~~ED~~l~~rl~~~G~ki~~~~~~~~~ 314 (534)
...+... ..+ ........++||++++++|||++.. ..||.++..|+.++|+++.++|++...
T Consensus 144 ~~~~~~~-~~~--~~~~~~~~~~rr~~~~~~g~f~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~~~~ 207 (219)
T cd06913 144 LLTQVYT-SHG--PTVIMPTWFCSREWFSHVGPFDEGGKGVPEDLLFFYEHLRKGGGVYRVDRCLLL 207 (219)
T ss_pred HHHHHHh-hcC--CccccccceeehhHHhhcCCccchhccchhHHHHHHHHHHcCCceEEEcceeee
Confidence 0000000 000 1112334679999999999998753 469999999999999999999997754
No 54
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.88 E-value=1.9e-21 Score=184.64 Aligned_cols=184 Identities=18% Similarity=0.180 Sum_probs=130.6
Q ss_pred EEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCC
Q 044519 93 VLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNG 172 (534)
Q Consensus 93 VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g 172 (534)
|||+||+||+++.+.++|+|+++|++++.+++| |+|+|+|++.+ ++++ .++++.. .+.
T Consensus 1 vsvii~~~n~~~~l~~~l~sl~~q~~~~~eviv-vdd~s~d~~~~---------~~~~---------~~~~~~~---~~~ 58 (221)
T cd02522 1 LSIIIPTLNEAENLPRLLASLRRLNPLPLEIIV-VDGGSTDGTVA---------IARS---------AGVVVIS---SPK 58 (221)
T ss_pred CEEEEEccCcHHHHHHHHHHHHhccCCCcEEEE-EeCCCCccHHH---------HHhc---------CCeEEEe---CCc
Confidence 689999999999999999999999997655433 55567777766 4432 3455542 234
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhh
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVE 252 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 252 (534)
|++.++|.|++.+ ++|+++++|+|+.++|+++++++..+ .+++..++.......+.+ ...+..... ..
T Consensus 59 g~~~a~n~g~~~a---~~~~i~~~D~D~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~---- 126 (221)
T cd02522 59 GRARQMNAGAAAA---RGDWLLFLHADTRLPPDWDAAIIETL-RADGAVAGAFRLRFDDPG--PRLRLLELG--AN---- 126 (221)
T ss_pred CHHHHHHHHHHhc---cCCEEEEEcCCCCCChhHHHHHHHHh-hcCCcEEEEEEeeecCCc--cchhhhhhc--cc----
Confidence 5999999999998 89999999999999999999998777 444554444443333322 111111100 00
Q ss_pred hhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCccc
Q 044519 253 QEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVK 314 (534)
Q Consensus 253 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 314 (534)
... ......+.++++++||++++++|||++....||.|++.|+.+.|+++.+ |...+.
T Consensus 127 --~~~-~~~~~~~~~~~~~~r~~~~~~~G~fd~~~~~ED~d~~~r~~~~G~~~~~-~~~~~~ 184 (221)
T cd02522 127 --LRS-RLFGLPYGDQGLFIRRELFEELGGFPELPLMEDVELVRRLRRRGRPALL-PSPVTT 184 (221)
T ss_pred --cee-cccCCCcCCceEEEEHHHHHHhCCCCccccccHHHHHHHHHhCCCEEEc-Cceeee
Confidence 000 0111123466899999999999999998899999999999999999877 555443
No 55
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.87 E-value=1.1e-20 Score=184.36 Aligned_cols=226 Identities=11% Similarity=0.069 Sum_probs=144.3
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
..|.|||+||+||+++.+.+||+|+++|+||+.+++| |+|+|+| .+ .+++..+++ .+.+++++..
T Consensus 3 ~~p~VSVIip~yN~~~~l~~~l~Svl~Qt~~~~EiIV-VDDgS~~--~~---------~~~~~~~~~--~~~ri~~i~~- 67 (279)
T PRK10018 3 DNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMII-VDDCSTS--WE---------QLQQYVTAL--NDPRITYIHN- 67 (279)
T ss_pred CCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCCeEEEE-EECCCCC--HH---------HHHHHHHHc--CCCCEEEEEC-
Confidence 4689999999999999999999999999999755433 5555664 22 444444432 2457888744
Q ss_pred CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhc--c
Q 044519 169 NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSL--D 246 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~--~ 246 (534)
+.++|.+.|+|.|++.| +||||+++|+|+.++|+.|+.++..+.+.++.+.+.+....... ... ........ .
T Consensus 68 ~~n~G~~~a~N~gi~~a---~g~~I~~lDaDD~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~p~ 142 (279)
T PRK10018 68 DINSGACAVRNQAIMLA---QGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVCQG-EVY-SQPASLPLYPK 142 (279)
T ss_pred CCCCCHHHHHHHHHHHc---CCCEEEEECCCCCCCccHHHHHHHHHHhCCCccEEEccceeecC-ccc-ccccccCCCCC
Confidence 45667999999999999 99999999999999999999999988655666666554322211 100 00000000 0
Q ss_pred cchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCC-CccchHHHHHHHHhCCCEEEEeccCcc-cccCCcCHHHH
Q 044519 247 YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR-TTVEDMDLAVRASLKGWKFVFVGDLGV-KNELPSTFKAY 324 (534)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~-~~~~p~t~~~~ 324 (534)
..+..... ...++.|+..+.++..+.+ ++|+++ ...||+|+..|+..+|++...+|++.. ++..+.+.+..
T Consensus 143 ~~~~~~~~------~~~n~ig~~~~~~~~~~~~-~~fd~~~~~~eDydlwlrl~~~~~~~~~~~~~l~~y~~~~~s~~~~ 215 (279)
T PRK10018 143 SPYSRRLF------YKRNIIGNQVFTWAWRFKE-CLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQIT 215 (279)
T ss_pred CCCCHHHH------HHhcCcCceeeehhhhhhh-cccCCCCCccccHHHHHHHHHhcCceEeeccceEEEEcCCCCcccc
Confidence 00000000 0112345556666666654 578664 458999999999999999999998743 33345444211
Q ss_pred HHHHhhhccchhhHHhhhh
Q 044519 325 RYQQHRWSCGPSNLFSKMT 343 (534)
Q Consensus 325 ~~Qr~RW~~G~~~~~~~~~ 343 (534)
.+..+ .++.++.++++.
T Consensus 216 ~s~~k--~~~~~~~~rk~~ 232 (279)
T PRK10018 216 SSPKK--FSGYFHFYRKHK 232 (279)
T ss_pred CCHHH--HHHHHHHHHHhh
Confidence 11111 244446666653
No 56
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.85 E-value=2.2e-20 Score=186.26 Aligned_cols=213 Identities=22% Similarity=0.282 Sum_probs=154.7
Q ss_pred CCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 90 YPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 90 ~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
.|.++++|++||..+.+.+|++++.+|+|+.+.++ .|+++|+|++.+ .+++.. ..+++++..+
T Consensus 2 ~~~i~~iiv~yn~~~~l~~~l~~l~~~~~~~~~iv-~vDn~s~d~~~~---------~~~~~~------~~~v~~i~~~- 64 (305)
T COG1216 2 MPKISIIIVTYNRGEDLVECLASLAAQTYPDDVIV-VVDNGSTDGSLE---------ALKARF------FPNVRLIENG- 64 (305)
T ss_pred CcceEEEEEecCCHHHHHHHHHHHhcCCCCCcEEE-EccCCCCCCCHH---------HHHhhc------CCcEEEEEcC-
Confidence 47899999999999999999999999999976543 355568888877 443210 4678888554
Q ss_pred CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHh-hh-ccc
Q 044519 170 RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQE-MS-LDY 247 (534)
Q Consensus 170 ~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~-~~-~~~ 247 (534)
.|.|-+++.|.|++.|.....+|++++|.|++++|++|.++++.+++++..+++++.....+... ....... .. ...
T Consensus 65 ~NlG~agg~n~g~~~a~~~~~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~ 143 (305)
T COG1216 65 ENLGFAGGFNRGIKYALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESL-YIDRRGGESDGLTG 143 (305)
T ss_pred CCccchhhhhHHHHHHhcCCCcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCc-chheeccccccccc
Confidence 55568999999999984333349999999999999999999999988888888888776543221 1111100 00 000
Q ss_pred -chhhhh---hc-ccccCccc-cccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEeccCcccccCCc
Q 044519 248 -HFSVEQ---EV-GSSTCQFF-GFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFVGDLGVKNELPS 319 (534)
Q Consensus 248 -~~~~~~---~~-~~~~~~~~-~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~ 319 (534)
...... .. ........ .++|+++++|+++++++|+++++.. .||.|++.|+.+.|+++.++|++.++|..-.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~li~~~~~~~vG~~de~~F~y~eD~D~~~R~~~~G~~i~~~p~a~i~H~~g~ 223 (305)
T COG1216 144 GWRASPLLEIAPDLSSYLEVVASLSGACLLIRREAFEKVGGFDERFFIYYEDVDLCLRARKAGYKIYYVPDAIIYHKIGS 223 (305)
T ss_pred cceecccccccccccchhhhhhhcceeeeEEcHHHHHHhCCCCcccceeehHHHHHHHHHHcCCeEEEeeccEEEEeccC
Confidence 000000 00 00001111 2689999999999999999998554 8999999999999999999999999986655
Q ss_pred C
Q 044519 320 T 320 (534)
Q Consensus 320 t 320 (534)
+
T Consensus 224 s 224 (305)
T COG1216 224 S 224 (305)
T ss_pred C
Confidence 4
No 57
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.84 E-value=1.1e-19 Score=175.18 Aligned_cols=189 Identities=12% Similarity=0.044 Sum_probs=127.4
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcC---CCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGL---SWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q---~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
|.|||+||+||+++.+++||+|+.+| .+++ ++|+ |+|+|+|+|.+ ++++..+ ..+++++.
T Consensus 1 ~~vSVIi~~yN~~~~l~~~l~sl~~~~~~~~~~--~EiIVvDdgStD~t~~---------i~~~~~~-----~~~i~~i~ 64 (248)
T PRK10063 1 MLLSVITVAFRNLEGIVKTHASLRHLAQDPGIS--FEWIVVDGGSNDGTRE---------FLENLNG-----IFNLRFVS 64 (248)
T ss_pred CeEEEEEEeCCCHHHHHHHHHHHHHHHhCCCCC--EEEEEEECcCcccHHH---------HHHHhcc-----cCCEEEEE
Confidence 68999999999999999999999753 3454 3444 45558998877 6655422 13577774
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcc
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLD 246 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~ 246 (534)
.+ +.|+++|+|.|++.| +||||+++|+|+..+|+.++.+.... .++...++.|.......+.....+...
T Consensus 65 -~~-~~G~~~A~N~Gi~~a---~g~~v~~ld~DD~~~~~~~~~~~~~~-~~~~~~~v~g~~~~~~~~~~~~~~~~~---- 134 (248)
T PRK10063 65 -EP-DNGIYDAMNKGIAMA---QGRFALFLNSGDIFHQDAANFVRQLK-MQKDNAMIIGDALLDFGDGHKIKRSAK---- 134 (248)
T ss_pred -CC-CCCHHHHHHHHHHHc---CCCEEEEEeCCcccCcCHHHHHHHHH-hCCCCeEEEeeeEEEcCCCcEEEEccC----
Confidence 33 446999999999999 99999999999999998765443333 343344444443322211111111000
Q ss_pred cchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCC-CccchHHHHHHHHhCCCEEEEeccCccc
Q 044519 247 YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR-TTVEDMDLAVRASLKGWKFVFVGDLGVK 314 (534)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 314 (534)
.. . .......+++.+.++|++.++. |+|++. ...||.|+..|+..+|+++.++|...+.
T Consensus 135 --~~--~----~~~~~~~~~~~~~~~~~~~~~~-~~fd~~~~~~~Dydl~lrl~~~g~~~~~v~~~l~~ 194 (248)
T PRK10063 135 --PG--W----YIYHSLPASHQAIFFPVSGLKK-WRYDLQYKVSSDYALAARLYKAGYAFKKLNGLVSE 194 (248)
T ss_pred --Ch--h----HHhcCCCCCCcEEEEEHHHHhc-CCCCcccchHHhHHHHHHHHHcCCcEEEcCceeEE
Confidence 00 0 0000112356778899998875 678764 4579999999999999999999988874
No 58
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.83 E-value=1.4e-19 Score=170.72 Aligned_cols=200 Identities=19% Similarity=0.128 Sum_probs=133.8
Q ss_pred EEEeccCchHHHHHHHHHHHcCCC----CCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSW----PSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR 170 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~y----p~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~ 170 (534)
|+||+|||++.+.++|+++.+|.+ ++.+++ +|+|+|+|+|.+ +++++.+++ +..++++..+ .
T Consensus 1 iiip~yN~~~~l~~~l~~l~~~~~~~~~~~~eii-vvdd~S~D~t~~---------~~~~~~~~~---~~~i~~i~~~-~ 66 (211)
T cd04188 1 VVIPAYNEEKRLPPTLEEAVEYLEERPSFSYEII-VVDDGSKDGTAE---------VARKLARKN---PALIRVLTLP-K 66 (211)
T ss_pred CEEcccChHHHHHHHHHHHHHHHhccCCCCEEEE-EEeCCCCCchHH---------HHHHHHHhC---CCcEEEEEcc-c
Confidence 689999999999999999998755 443432 255668888877 776665543 2224666444 4
Q ss_pred CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC----CchhhHhHhhhcc
Q 044519 171 NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNAD----ECLMTRLQEMSLD 246 (534)
Q Consensus 171 ~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~----~~~~~~~~~~~~~ 246 (534)
+.|+++|+|.|++.| ++|||+++|+|..++|+++.+++..+. +++.++|.|.......+ .++.........
T Consensus 67 n~G~~~a~~~g~~~a---~gd~i~~ld~D~~~~~~~l~~l~~~~~-~~~~~~v~g~r~~~~~~~~~~~~~~~~~~~~~~- 141 (211)
T cd04188 67 NRGKGGAVRAGMLAA---RGDYILFADADLATPFEELEKLEEALK-TSGYDIAIGSRAHLASAAVVKRSWLRNLLGRGF- 141 (211)
T ss_pred CCCcHHHHHHHHHHh---cCCEEEEEeCCCCCCHHHHHHHHHHHh-ccCCcEEEEEeeccCCcccccccHHHHHHHHHH-
Confidence 455999999999999 999999999999999999999999973 44556666654433221 122222211110
Q ss_pred cchhhhhhcccccCccccccCCcchhhHHHHHHhCCCC-CCCccchHHHHHHHHhCCCEEEEeccCcccccCCc
Q 044519 247 YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWK-DRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPS 319 (534)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~-~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~ 319 (534)
........+.. ......+..++||++++++++.. .....+|.|+..++.+.|+++.++|- .+.+.|.
T Consensus 142 -~~~~~~~~~~~---~~d~~~g~~~~~r~~~~~~~~~~~~~~~~~d~el~~r~~~~g~~~~~vpi--~~~~~~~ 209 (211)
T cd04188 142 -NFLVRLLLGLG---IKDTQCGFKLFTRDAARRLFPRLHLERWAFDVELLVLARRLGYPIEEVPV--RWVEIPG 209 (211)
T ss_pred -HHHHHHHcCCC---CcccccCceeEcHHHHHHHHhhhhccceEeeHHHHHHHHHcCCeEEEcCc--ceecCCC
Confidence 01000001111 11112345799999999986543 34568899999999999999999983 4555553
No 59
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.82 E-value=4e-20 Score=167.87 Aligned_cols=154 Identities=25% Similarity=0.360 Sum_probs=128.7
Q ss_pred CCCChhHHHHHHHh-hhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccch
Q 044519 171 NGYKAGALKEGLEK-QYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHF 249 (534)
Q Consensus 171 ~g~Ka~aln~gl~~-a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~ 249 (534)
..+|.+|+..++++ + ++|++++.|+|..++||+|.+++.++ ++|++++|++.....+.+ ++..++.......+.
T Consensus 15 ~N~Kv~nL~~~~~~~a---~~d~~~~~DsDi~v~p~~L~~lv~~l-~~p~vglVt~~~~~~~~~-~~~~~l~~~~~~~~~ 89 (175)
T PF13506_consen 15 CNPKVNNLAQGLEAGA---KYDYLVISDSDIRVPPDYLRELVAPL-ADPGVGLVTGLPRGVPAR-GFWSRLEAAFFNFLP 89 (175)
T ss_pred CChHHHHHHHHHHhhC---CCCEEEEECCCeeECHHHHHHHHHHH-hCCCCcEEEecccccCCc-CHHHHHHHHHHhHHH
Confidence 34699999999998 8 99999999999999999999999999 789999999988766654 666666543333222
Q ss_pred hhhhhcccccCccccccCCcchhhHHHHHHhCCCCC--CCccchHHHHHHHHhCCCEEEEeccCcccccCC----cCHHH
Q 044519 250 SVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD--RTTVEDMDLAVRASLKGWKFVFVGDLGVKNELP----STFKA 323 (534)
Q Consensus 250 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p----~t~~~ 323 (534)
...+. .....+..|.++++||++++++||++. +.++||+.++.+++++|+++...|.+.+.+..| .++++
T Consensus 90 ~~~~a----~~~~~~~~G~~m~~rr~~L~~~GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~~~v~~~~~~~~~~~s~~~ 165 (175)
T PF13506_consen 90 GVLQA----LGGAPFAWGGSMAFRREALEEIGGFEALADYLADDYALGRRLRARGYRVVLSPYPVVQTSVPRTLEDSFRD 165 (175)
T ss_pred HHHHH----hcCCCceecceeeeEHHHHHHcccHHHHhhhhhHHHHHHHHHHHCCCeEEEcchheeecccCccccccHHH
Confidence 22222 234555789999999999999999987 788999999999999999999999988877777 48999
Q ss_pred HHHHHhhhcc
Q 044519 324 YRYQQHRWSC 333 (534)
Q Consensus 324 ~~~Qr~RW~~ 333 (534)
+++|+.||++
T Consensus 166 ~~~r~~RW~r 175 (175)
T PF13506_consen 166 FFRRQLRWAR 175 (175)
T ss_pred HHHHHHhhcC
Confidence 9999999985
No 60
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.82 E-value=1.7e-18 Score=173.89 Aligned_cols=207 Identities=16% Similarity=0.155 Sum_probs=137.9
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcC------CCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCc
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGL------SWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGV 160 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q------~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~ 160 (534)
+..|.+||+||+|||++.++++++++.++ +.+....+|+ |+|+|+|+|.+ ++++++++....+.
T Consensus 67 ~~~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~---------i~~~~~~~~~~~~~ 137 (333)
T PTZ00260 67 DSDVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLK---------VAKDFWRQNINPNI 137 (333)
T ss_pred CCCeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHH---------HHHHHHHhcCCCCC
Confidence 45788999999999999999999998653 1233234444 55669999888 77666554311234
Q ss_pred cEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhc--CCcEEEEeeeeEeecCC-----
Q 044519 161 NVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLE--NKELGLVQARWKFVNAD----- 233 (534)
Q Consensus 161 ~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~--~~~v~~V~~~~~~~n~~----- 233 (534)
+++++..+ ++.||++|+|.|++++ +||+++++|+|...+|+.+.++++.+.+ ++++++|.|.......+
T Consensus 138 ~i~vi~~~-~N~G~~~A~~~Gi~~a---~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~~~~~dvV~GsR~~~~~~~~~~~ 213 (333)
T PTZ00260 138 DIRLLSLL-RNKGKGGAVRIGMLAS---RGKYILMVDADGATDIDDFDKLEDIMLKIEQNGLGIVFGSRNHLVDSDVVAK 213 (333)
T ss_pred cEEEEEcC-CCCChHHHHHHHHHHc---cCCEEEEEeCCCCCCHHHHHHHHHHHHHhhccCCceEEeeccccccCccccc
Confidence 57777444 5556999999999998 9999999999999999999999998843 57788888876543221
Q ss_pred CchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhC-CCCCCCccchHHHHHHHHhCCCEEEEeccCc
Q 044519 234 ECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG-GWKDRTTVEDMDLAVRASLKGWKFVFVGDLG 312 (534)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G-g~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~ 312 (534)
.++..+.... ..++......+.. ........-++||++++++= ....+...-|.|+..++.+.|+++..+|-..
T Consensus 214 ~~~~r~~~~~--~~~~l~~~~~~~~---i~D~~~Gfk~~~r~~~~~i~~~~~~~~~~fd~Ell~~a~~~g~~I~EvPv~~ 288 (333)
T PTZ00260 214 RKWYRNILMY--GFHFIVNTICGTN---LKDTQCGFKLFTRETARIIFPSLHLERWAFDIEIVMIAQKLNLPIAEVPVNW 288 (333)
T ss_pred CcHHHHHHHH--HHHHHHHHHcCCC---cccCCCCeEEEeHHHHHHHhhhccccCccchHHHHHHHHHcCCCEEEEceee
Confidence 1222222111 1111111111111 11122345689999998761 1111233568999999999999999998753
No 61
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.81 E-value=5.9e-19 Score=174.16 Aligned_cols=197 Identities=14% Similarity=0.131 Sum_probs=132.5
Q ss_pred ccCch-HHHHHHHHHHHcCCCCCCceEEEEEcC-CChh-hhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 99 MYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDD-STNE-VLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 99 ~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~-t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
+||++ +.+++||+|+.+|.+ + |+|+|| |+|+ +.+ +.. +...++++++.+ .+.|.+
T Consensus 2 tyn~~~~~l~~~l~sl~~q~~---~--iiVVDN~S~~~~~~~--------~~~--------~~~~~i~~i~~~-~N~G~a 59 (281)
T TIGR01556 2 TFNPDLEHLGELITSLPKQVD---R--IIAVDNSPHSDQPLK--------NAR--------LRGQKIALIHLG-DNQGIA 59 (281)
T ss_pred ccCccHHHHHHHHHHHHhcCC---E--EEEEECcCCCcHhHH--------HHh--------ccCCCeEEEECC-CCcchH
Confidence 79975 899999999999862 3 445555 5443 333 121 123578888544 455699
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCC-cEEEEeeeeEeecCCCchhhHhHhhhcccchhhhh-
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENK-ELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQ- 253 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~-~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~- 253 (534)
+|+|.|++.|...++|||+++|+|+.+++++++++++.+.+++ +++++++.....+. ........... .......
T Consensus 60 ~a~N~Gi~~a~~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~ 136 (281)
T TIGR01556 60 GAQNQGLDASFRRGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGT-SRRLPAIHLDG--LLLRQISL 136 (281)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCC-cccCCceeecc--cceeeecc
Confidence 9999999998656799999999999999999999999986555 77887765422111 11100000000 0000000
Q ss_pred hcccccCccccccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEeccCcccccCCcC
Q 044519 254 EVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFVGDLGVKNELPST 320 (534)
Q Consensus 254 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t 320 (534)
.............++++++||++++++|+|+++.. .||.|+++|+.++|+++.++|++.++|....+
T Consensus 137 ~~~~~~~~~~~~~~sg~li~~~~~~~iG~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~~~~~H~~g~~ 205 (281)
T TIGR01556 137 DGLTTPQKTSFLISSGCLITREVYQRLGMMDEELFIDHVDTEWSLRAQNYGIPLYIDPDIVLEHRIGDS 205 (281)
T ss_pred cccCCceeccEEEcCcceeeHHHHHHhCCccHhhcccchHHHHHHHHHHCCCEEEEeCCEEEEEecCCc
Confidence 00000111112245667899999999999998643 68999999999999999999999998876654
No 62
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.79 E-value=1.4e-19 Score=163.12 Aligned_cols=169 Identities=21% Similarity=0.251 Sum_probs=112.1
Q ss_pred EEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCC
Q 044519 94 LVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGY 173 (534)
Q Consensus 94 sViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~ 173 (534)
||+||+||+++.+.++|+|+.+|.++..+++| |+|+|+|++.+ ++++..+ .+.++++++.+++. |
T Consensus 1 Svvip~~n~~~~l~~~l~sl~~q~~~~~eiiv-vdd~s~d~~~~---------~~~~~~~----~~~~i~~i~~~~n~-g 65 (169)
T PF00535_consen 1 SVVIPTYNEAEYLERTLESLLKQTDPDFEIIV-VDDGSTDETEE---------ILEEYAE----SDPNIRYIRNPENL-G 65 (169)
T ss_dssp EEEEEESS-TTTHHHHHHHHHHHSGCEEEEEE-EECS-SSSHHH---------HHHHHHC----CSTTEEEEEHCCCS-H
T ss_pred CEEEEeeCCHHHHHHHHHHHhhccCCCEEEEE-ecccccccccc---------ccccccc----cccccccccccccc-c
Confidence 79999999999999999999999766655432 55557677665 6655443 46789999776554 6
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhh
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQ 253 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 253 (534)
+++++|.|++++ ++||++++|+|+.++|++|+++++.+.+++. +++.+.......+....................
T Consensus 66 ~~~~~n~~~~~a---~~~~i~~ld~D~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (169)
T PF00535_consen 66 FSAARNRGIKHA---KGEYILFLDDDDIISPDWLEELVEALEKNPP-DVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKI 141 (169)
T ss_dssp HHHHHHHHHHH-----SSEEEEEETTEEE-TTHHHHHHHHHHHCTT-EEEEEEEEEEECTTETEECCCTSEEEECCHCHH
T ss_pred cccccccccccc---ceeEEEEeCCCceEcHHHHHHHHHHHHhCCC-cEEEEEEEEecCCccccccccchhhhhhhhhHH
Confidence 999999999999 9999999999999999999999999965444 444444444433322211111100001111111
Q ss_pred hcccccCccccccCCcchhhHHHHHHhC
Q 044519 254 EVGSSTCQFFGFNGTAGVWRIQAIEDAG 281 (534)
Q Consensus 254 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~G 281 (534)
...........+.|++.++||++++++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~rr~~~~~~~ 169 (169)
T PF00535_consen 142 FNNIRFWKISFFIGSCALFRRSVFEEIG 169 (169)
T ss_dssp HHTTHSTTSSEESSSCEEEEEHHHHHCH
T ss_pred HHhhhcCCcccccccEEEEEHHHHHhhC
Confidence 1233344455568999999999999985
No 63
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.78 E-value=2e-18 Score=158.97 Aligned_cols=179 Identities=19% Similarity=0.139 Sum_probs=121.2
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGY 173 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~ 173 (534)
|+||+||+++.+.+||+|+.+|.++....+|+|+|| |+|++.+ .+++..++ ...++++..+ .+.|
T Consensus 1 iii~~~n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~---------~~~~~~~~----~~~~~~~~~~-~n~G 66 (185)
T cd04179 1 VVIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAE---------IARELAAR----VPRVRVIRLS-RNFG 66 (185)
T ss_pred CeecccChHhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHH---------HHHHHHHh----CCCeEEEEcc-CCCC
Confidence 689999999999999999999988433455556665 6666655 66555443 3445566444 4445
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC--CchhhHhHhhhcccchhh
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNAD--ECLMTRLQEMSLDYHFSV 251 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~--~~~~~~~~~~~~~~~~~~ 251 (534)
+++|+|.|++.+ ++|+++++|+|+.++|++|++++..+ .+++.++|.|.....+.. .....+....... ...
T Consensus 67 ~~~a~n~g~~~a---~gd~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~--~~~ 140 (185)
T cd04179 67 KGAAVRAGFKAA---RGDIVVTMDADLQHPPEDIPKLLEKL-LEGGADVVIGSRFVRGGGAGMPLLRRLGSRLFN--FLI 140 (185)
T ss_pred ccHHHHHHHHHh---cCCEEEEEeCCCCCCHHHHHHHHHHH-hccCCcEEEEEeecCCCcccchHHHHHHHHHHH--HHH
Confidence 999999999999 99999999999999999999999986 345677777776554432 2222222111000 011
Q ss_pred hhhcccccCccccccCCcchhhHHHHHHhC--CCCCCCccchHHHHHH
Q 044519 252 EQEVGSSTCQFFGFNGTAGVWRIQAIEDAG--GWKDRTTVEDMDLAVR 297 (534)
Q Consensus 252 ~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G--g~~~~~~~ED~~l~~r 297 (534)
... .........|+++++||++++++| +++ ....+|.|+..|
T Consensus 141 ~~~---~~~~~~~~~~~~~~~~r~~~~~i~~~~~~-~~~~~~~~~~~~ 184 (185)
T cd04179 141 RLL---LGVRISDTQSGFRLFRREVLEALLSLLES-NGFEFGLELLVG 184 (185)
T ss_pred HHH---cCCCCcCCCCceeeeHHHHHHHHHhhccc-cCcceeeEeeec
Confidence 110 112223346888999999999994 444 456777776655
No 64
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.78 E-value=8.7e-18 Score=165.34 Aligned_cols=205 Identities=18% Similarity=0.249 Sum_probs=132.6
Q ss_pred EEEEeccCchH------HHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 94 LVQIPMYNEKE------VYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 94 sViIP~yne~~------~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
|||||++++.. .+..||.++..+.-+ .+++|+|+|++++++.. +.+++.+++ .....++..
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~-~~~eiIvvd~~s~~~~~--------~~l~~~~~~----~~~~~~i~~ 67 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQFQSD-PDFEIIVVDDGSSDEFD--------EELKKLCEK----NGFIRYIRH 67 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhcCCC-CCEEEEEEECCCchhHH--------HHHHHHHhc----cCceEEEEc
Confidence 79999999983 455557777664333 34566677765554443 244444443 223335543
Q ss_pred cCCC--CCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHH---HHhcCCcEEEEeeeeEeecCCCchhhHhHh
Q 044519 168 KNRN--GYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIP---YLLENKELGLVQARWKFVNADECLMTRLQE 242 (534)
Q Consensus 168 ~~~~--g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~---~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~ 242 (534)
+..+ -+++.|+|.|++.| ++|+|+++|+|++++|+++.+++. .+.++++. .+..+..+.+.+.+. ....
T Consensus 68 ~~~~~~f~~a~arN~g~~~A---~~d~l~flD~D~i~~~~~i~~~~~~~~~l~~~~~~-~~~~p~~yl~~~~~~--~~~~ 141 (281)
T PF10111_consen 68 EDNGEPFSRAKARNIGAKYA---RGDYLIFLDADCIPSPDFIEKLLNHVKKLDKNPNA-FLVYPCLYLSEEGSE--KFYS 141 (281)
T ss_pred CCCCCCcCHHHHHHHHHHHc---CCCEEEEEcCCeeeCHHHHHHHHHHHHHHhcCCCc-eEEEeeeeccchhhH--HHhh
Confidence 3222 26999999999999 999999999999999999999999 66444433 333344444433221 1110
Q ss_pred hh-cccchhhh-hh--cccccCccccccCCcchhhHHHHHHhCCCCCCC---ccchHHHHHHHHhCCCEEEEeccCcccc
Q 044519 243 MS-LDYHFSVE-QE--VGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT---TVEDMDLAVRASLKGWKFVFVGDLGVKN 315 (534)
Q Consensus 243 ~~-~~~~~~~~-~~--~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~---~~ED~~l~~rl~~~G~ki~~~~~~~~~~ 315 (534)
.. ........ .. ..+.........|++++++|+.+.++||||++. -.||.|++.|+.+.|.++...++..+++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~~~~~~ 221 (281)
T PF10111_consen 142 QFKNLWDHEFLESFISGKNSLWEFIAFASSCFLINREDFLEIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPDYLVYH 221 (281)
T ss_pred cchhcchHHHHHHHhhccccccccccccceEEEEEHHHHHHhCCCCccccCCCcchHHHHHHHHHcCCcEecChHHhccc
Confidence 00 00000101 01 111222233356799999999999999999865 3799999999999999999999988865
Q ss_pred cC
Q 044519 316 EL 317 (534)
Q Consensus 316 ~~ 317 (534)
..
T Consensus 222 ~~ 223 (281)
T PF10111_consen 222 SH 223 (281)
T ss_pred cc
Confidence 33
No 65
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=99.77 E-value=2.5e-17 Score=175.51 Aligned_cols=147 Identities=19% Similarity=0.283 Sum_probs=130.7
Q ss_pred cCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccC
Q 044519 188 KDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNG 267 (534)
Q Consensus 188 ~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 267 (534)
.+-++|+++|+|+.++|+++.++++.|..||++|+++| +..|..++|+...|.+++..++..+....+..+...+.+|
T Consensus 439 ~~v~~il~vD~dT~~~P~ai~~lv~~f~~dp~VggaCG--~I~~~~~~w~v~~Q~FEY~Ish~l~Ka~ESvFG~VsclPG 516 (862)
T KOG2571|consen 439 PSVDYILVVDADTRLDPDALYHLVKVFDEDPQVGGACG--RILNKGGSWVVAYQNFEYAISHNLQKATESVFGCVSCLPG 516 (862)
T ss_pred CcceEEEEecCCCccCcHHHHHHHHHhccCcccceecc--ccccCCCceEEeHHHHHHHHHHHHHHhhhhhceeEEecCc
Confidence 45678999999999999999999999988999999999 4567778999999999999999988888999999999999
Q ss_pred CcchhhHHHHHHhC----------C---CCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHHHhhhccc
Q 044519 268 TAGVWRIQAIEDAG----------G---WKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHRWSCG 334 (534)
Q Consensus 268 ~~~~~Rr~~l~~~G----------g---~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G 334 (534)
+.+++|-+++.+-- + ......+||..|+.++.++||++.|++++.+.++.|+++.++..||+||..|
T Consensus 517 cfs~yR~~aL~~~~~~~~y~~~~~~~~~~~~~~~geDR~L~~~llskgy~l~Y~a~s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 517 CFSLYRASALMDQFVEYFYGEKFSGPRHGIQYSLGEDRWLCTLLLSKGYRLKYVAASDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred hhHHHHHHHHhcchHHhhhchhhcCcccccccccchhHHHHHHHHhccceeeeeccccccccCcHhHHHHHHHhhhhccc
Confidence 99999998876531 0 0112379999999999999999999999999999999999999999999999
Q ss_pred hh
Q 044519 335 PS 336 (534)
Q Consensus 335 ~~ 336 (534)
.+
T Consensus 597 ~f 598 (862)
T KOG2571|consen 597 IF 598 (862)
T ss_pred ch
Confidence 44
No 66
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.75 E-value=2.8e-17 Score=162.80 Aligned_cols=198 Identities=19% Similarity=0.123 Sum_probs=127.6
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCC-C-CCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSW-P-SDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~y-p-~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
...|+|||+||+|||++.|.++|+++.+|.+ + .+++ |+|+|+|+|+|.+ ++++...+.. .....+
T Consensus 28 ~~~~~vSVVIPayNee~~I~~~l~sl~~~~~~~~~~EI-IVVDDgStD~T~~---------ia~~~~~~v~---~~~~~~ 94 (306)
T PRK13915 28 KAGRTVSVVLPALNEEETVGKVVDSIRPLLMEPLVDEL-IVIDSGSTDATAE---------RAAAAGARVV---SREEIL 94 (306)
T ss_pred cCCCCEEEEEecCCcHHHHHHHHHHHHHHhccCCCcEE-EEEeCCCccHHHH---------HHHHhcchhh---cchhhh
Confidence 4678999999999999999999999998765 2 2333 3356679998887 5544322110 011111
Q ss_pred EecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcCCcEEEEeeeeEeec--------CCCch
Q 044519 166 TRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLENKELGLVQARWKFVN--------ADECL 236 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n--------~~~~~ 236 (534)
.....+.||+.|+|.|++.+ ++|+++++|+|+. ++|+++.+++..+.+++++++|.|.....- .....
T Consensus 95 ~~~~~n~Gkg~A~~~g~~~a---~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~~~~V~g~~~r~~~~~~~~~~~~~gr 171 (306)
T PRK13915 95 PELPPRPGKGEALWRSLAAT---TGDIVVFVDADLINFDPMFVPGLLGPLLTDPGVHLVKAFYRRPLRVSGGVDATGGGR 171 (306)
T ss_pred hccccCCCHHHHHHHHHHhc---CCCEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEEeccccccccccCcCCCCc
Confidence 12245567999999999998 9999999999997 899999999999966899999988532110 00111
Q ss_pred hhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHh-CCC-EEEEec
Q 044519 237 MTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASL-KGW-KFVFVG 309 (534)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~-~G~-ki~~~~ 309 (534)
.++.... ..+... ...........++..++||++++++. ++. ..+.|.++...+.+ .|. ++..++
T Consensus 172 ~~~~~~~---~l~~~~---~~~l~~i~dp~sG~~a~rr~~l~~l~-~~~-~yg~e~~~l~~~~~~~g~~~i~~V~ 238 (306)
T PRK13915 172 VTELVAR---PLLNLL---RPELAGFVQPLGGEYAGRRELLESLP-FVP-GYGVEIGLLIDTLDRLGLDAIAQVD 238 (306)
T ss_pred hHHHHHH---HHHHHH---HHhhhcccCcchHhHHHHHHHHHhCC-CCC-CCeehHHHHHHHHHHhCcCceEEEE
Confidence 1111000 000000 00011111223445789999999984 553 35668888888774 576 666665
No 67
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.74 E-value=3e-17 Score=156.71 Aligned_cols=229 Identities=16% Similarity=0.204 Sum_probs=179.9
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
..+|.|||+.|..+-++++-..+||....+|++.|+. +++++++|+.++ ++++..++|+. ...++...
T Consensus 82 ~~LPgVSiikPl~G~d~nl~~Nlesffts~Y~~~ElL-fcv~s~eDpAi~---------vv~~Ll~kyp~--VdAklf~g 149 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKGVDPNLYHNLESFFTSQYHKYELL-FCVESSEDPAIE---------VVERLLKKYPN--VDAKLFFG 149 (431)
T ss_pred CCCCCceEEeecccCCchhHHhHHHHHhhccCceEEE-EEEccCCCcHHH---------HHHHHHhhCCC--cceEEEEc
Confidence 3689999999999999999999999999999977654 488999999988 99999998863 34444433
Q ss_pred cCCCC--CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhc
Q 044519 168 KNRNG--YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSL 245 (534)
Q Consensus 168 ~~~~g--~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~ 245 (534)
.+..| .|..|+.-|.+.| ++|+|++.|+|....||.+..++..|...++.+.|++.....++++ +-.......+
T Consensus 150 G~~vg~npKInN~mpgy~~a---~ydlvlisDsgI~m~pdtildm~t~M~shekmalvtq~py~~dr~G-f~atle~~~f 225 (431)
T KOG2547|consen 150 GEKVGLNPKINNMMPGYRAA---KYDLVLISDSGIFMKPDTILDMATTMMSHEKMALVTQTPYCKDRQG-FDATLEQVYF 225 (431)
T ss_pred ccccccChhhhccCHHHHHh---cCCEEEEecCCeeecCchHHHHHHhhhcccceeeecCCceeecccc-chhhhhheee
Confidence 33333 5999999999999 9999999999999999999999999987889999988877766654 2222221111
Q ss_pred ccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCC--CCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHH
Q 044519 246 DYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD--RTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKA 323 (534)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~ 323 (534)
........ ......++.+..|-..+.||+++++.||... ..+.||...+..+..+|||..+...+.-.+..-.+...
T Consensus 226 gTsh~r~y-l~~n~~~~~c~tgms~~mrK~~ld~~ggi~~f~~yLaedyFaaksllSRG~ksaist~palQnSas~~mss 304 (431)
T KOG2547|consen 226 GTSHPRIY-LSGNVLGFNCSTGMSSMMRKEALDECGGISAFGGYLAEDYFAAKSLLSRGWKSAISTHPALQNSASVTMSS 304 (431)
T ss_pred ccCCceEE-EccccccccccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhhHHHH
Confidence 11111111 1223444566789999999999999999876 45799999999999999999998877777777788889
Q ss_pred HHHHHhhhcc
Q 044519 324 YRYQQHRWSC 333 (534)
Q Consensus 324 ~~~Qr~RW~~ 333 (534)
+.+|-.||.+
T Consensus 305 f~~Ri~rwvk 314 (431)
T KOG2547|consen 305 FLDRIIRWVK 314 (431)
T ss_pred HHHHHHHhhh
Confidence 9999999865
No 68
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.73 E-value=4.8e-17 Score=149.49 Aligned_cols=174 Identities=18% Similarity=0.146 Sum_probs=117.7
Q ss_pred EEEeccCchHHHHHHHHHHHcCC---CCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLS---WPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRN 171 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~---yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~ 171 (534)
|+||+|||++.+.++++++.++. ++..+++ +|+|+|+|++.+ ++++..++ ..+++++... ++
T Consensus 1 viIp~~n~~~~l~~~l~sl~~~~~~~~~~~eii-vvdd~s~d~t~~---------~~~~~~~~----~~~i~~i~~~-~n 65 (181)
T cd04187 1 IVVPVYNEEENLPELYERLKAVLESLGYDYEII-FVDDGSTDRTLE---------ILRELAAR----DPRVKVIRLS-RN 65 (181)
T ss_pred CEEeecCchhhHHHHHHHHHHHHHhcCCCeEEE-EEeCCCCccHHH---------HHHHHHhh----CCCEEEEEec-CC
Confidence 68999999999999998886543 4544433 255668888776 66554433 4567777554 45
Q ss_pred CCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhh
Q 044519 172 GYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSV 251 (534)
Q Consensus 172 g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 251 (534)
.|+++|+|.|++++ ++|+++++|+|+.++|++|.++++.+ +++.++|.|.....+ .+...+...........
T Consensus 66 ~G~~~a~n~g~~~a---~~d~i~~~D~D~~~~~~~l~~l~~~~--~~~~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~- 137 (181)
T cd04187 66 FGQQAALLAGLDHA---RGDAVITMDADLQDPPELIPEMLAKW--EEGYDVVYGVRKNRK--ESWLKRLTSKLFYRLIN- 137 (181)
T ss_pred CCcHHHHHHHHHhc---CCCEEEEEeCCCCCCHHHHHHHHHHH--hCCCcEEEEEecCCc--chHHHHHHHHHHHHHHH-
Confidence 56999999999999 99999999999999999999999986 334566666654433 33333322111000000
Q ss_pred hhhcccccCccccccCCcchhhHHHHHHhCCCCCCC-ccchHHHH
Q 044519 252 EQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT-TVEDMDLA 295 (534)
Q Consensus 252 ~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~-~~ED~~l~ 295 (534)
.. .........|++.++||++++++|+|++.. ..+|.+..
T Consensus 138 -~~---~~~~~~~~~~~~~~~~r~~~~~i~~~d~~~~~~~~~~~~ 178 (181)
T cd04187 138 -KL---SGVDIPDNGGDFRLMDRKVVDALLLLPERHRFLRGLIAW 178 (181)
T ss_pred -HH---cCCCCCCCCCCEEEEcHHHHHHHHhcCCCCccHHHHHHH
Confidence 00 112222346788899999999999999854 35565543
No 69
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.72 E-value=2.2e-15 Score=150.93 Aligned_cols=193 Identities=15% Similarity=0.149 Sum_probs=123.9
Q ss_pred CCcEEEEEeccCchHHHHHHHHHHHc---CCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 90 YPMVLVQIPMYNEKEVYKLSIGAACG---LSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 90 ~P~VsViIP~yne~~~l~~~L~sl~~---q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
.+++||+||+|||++.+.++++++.+ |..++.++ |+|+|+|+|+|.+ ++++..++ .+.+++.+.
T Consensus 5 ~~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~EI-IvVDDgS~D~T~~---------il~~~~~~---~~~~v~~i~ 71 (325)
T PRK10714 5 IKKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEI-LLIDDGSSDNSAE---------MLVEAAQA---PDSHIVAIL 71 (325)
T ss_pred CCeEEEEEcccCchhhHHHHHHHHHHHHHhCCCCEEE-EEEeCCCCCcHHH---------HHHHHHhh---cCCcEEEEE
Confidence 46799999999999999999988743 44333333 3356669998887 66554332 245565553
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcc
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLD 246 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~ 246 (534)
. +++.||++|+|.|+++| ++|+++++|||...+|+.+.++++.+.+ +.++|.+... +...++..+.-...+.
T Consensus 72 ~-~~n~G~~~A~~~G~~~A---~gd~vv~~DaD~q~~p~~i~~l~~~~~~--~~DvV~~~r~--~~~~~~~r~~~s~~~~ 143 (325)
T PRK10714 72 L-NRNYGQHSAIMAGFSHV---TGDLIITLDADLQNPPEEIPRLVAKADE--GYDVVGTVRQ--NRQDSWFRKTASKMIN 143 (325)
T ss_pred e-CCCCCHHHHHHHHHHhC---CCCEEEEECCCCCCCHHHHHHHHHHHHh--hCCEEEEEEc--CCCCcHHHHHHHHHHH
Confidence 3 45667999999999999 9999999999999999999999999843 3556766542 3233444433211111
Q ss_pred cchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCc
Q 044519 247 YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLG 312 (534)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~ 312 (534)
. ......+... ....+..-++||++++++-...+. +..+...+...|+++..+|-..
T Consensus 144 ~--l~~~~~g~~~---~d~~~gfr~~~r~~~~~l~~~~~~----~~~~~~l~~~~g~~i~evpv~~ 200 (325)
T PRK10714 144 R--LIQRTTGKAM---GDYGCMLRAYRRHIVDAMLHCHER----STFIPILANTFARRAIEIPVHH 200 (325)
T ss_pred H--HHHHHcCCCC---CCCCcCeEEEcHHHHHHHHHCCCC----ccHHHHHHHHcCCCEEEEEeEe
Confidence 1 1111111111 111233458999999988433332 2233455567899988877543
No 70
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.65 E-value=3.4e-15 Score=131.79 Aligned_cols=152 Identities=27% Similarity=0.322 Sum_probs=119.0
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGY 173 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~ 173 (534)
|+||++|+.+.+.++++|+.+|+++..+ |+++|| ++|++.+ .+++..+. ....... ....++|
T Consensus 1 iii~~~~~~~~l~~~l~s~~~~~~~~~~--i~i~~~~~~~~~~~---------~~~~~~~~----~~~~~~~-~~~~~~g 64 (156)
T cd00761 1 VIIPAYNEEPYLERCLESLLAQTYPNFE--VIVVDDGSTDGTLE---------ILEEYAKK----DPRVIRV-INEENQG 64 (156)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCccceE--EEEEeCCCCccHHH---------HHHHHHhc----CCCeEEE-EecCCCC
Confidence 5899999999999999999999986544 444554 5555444 44433221 2334444 3345567
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhh
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQ 253 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 253 (534)
+++++|.+++.+ ++|+++++|+|..++|+++..++..+..+++.+++++.
T Consensus 65 ~~~~~~~~~~~~---~~d~v~~~d~D~~~~~~~~~~~~~~~~~~~~~~~v~~~--------------------------- 114 (156)
T cd00761 65 LAAARNAGLKAA---RGEYILFLDADDLLLPDWLERLVAELLADPEADAVGGP--------------------------- 114 (156)
T ss_pred hHHHHHHHHHHh---cCCEEEEECCCCccCccHHHHHHHHHhcCCCceEEecc---------------------------
Confidence 999999999998 99999999999999999999986666578888888776
Q ss_pred hcccccCccccccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEE
Q 044519 254 EVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFV 306 (534)
Q Consensus 254 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~ 306 (534)
++++++++.++++|++++... .||.++..++...|++..
T Consensus 115 --------------~~~~~~~~~~~~~~~~~~~~~~~~ed~~~~~~~~~~g~~~~ 155 (156)
T cd00761 115 --------------GNLLFRRELLEEIGGFDEALLSGEEDDDFLLRLLRGGKVAF 155 (156)
T ss_pred --------------chheeeHHHHHHhCCcchHhcCCcchHHHHHHHHhhccccc
Confidence 678899999999999987555 599999999999887653
No 71
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=99.63 E-value=1.2e-14 Score=126.09 Aligned_cols=202 Identities=18% Similarity=0.148 Sum_probs=131.4
Q ss_pred CcEEEEEeccCchHHHHHHHH---HHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 91 PMVLVQIPMYNEKEVYKLSIG---AACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~---sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
++.||++|+|||.+++.-++. ....+.-.+.++ |+|+|+|+|.|.+ .++++.+.+ .+.++....|
T Consensus 3 ~kYsvilPtYnEk~Nlpi~~~li~~~~~e~~~~~ei-IivDD~SpDGt~~---------~a~~L~k~y--g~d~i~l~pR 70 (238)
T KOG2978|consen 3 IKYSVILPTYNEKENLPIITRLIAKYMSEEGKKYEI-IIVDDASPDGTQE---------VAKALQKIY--GEDNILLKPR 70 (238)
T ss_pred cceeEEeccccCCCCCeeeHHHHHhhhhhhcCceEE-EEEeCCCCCccHH---------HHHHHHHHh--CCCcEEEEec
Confidence 578999999999976654433 333333333333 3366679999988 777666555 3567877777
Q ss_pred cCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHh-hhcc
Q 044519 168 KNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQE-MSLD 246 (534)
Q Consensus 168 ~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~-~~~~ 246 (534)
.+..| -..|--.|+++| +|||++++|||-..+|.++.++++.. .+.+.++|.|.....+..-.-+..-+. ++..
T Consensus 71 ~~klG-LgtAy~hgl~~a---~g~fiviMDaDlsHhPk~ipe~i~lq-~~~~~div~GTRYa~~ggV~gW~mkRk~IS~g 145 (238)
T KOG2978|consen 71 TKKLG-LGTAYIHGLKHA---TGDFIVIMDADLSHHPKFIPEFIRLQ-KEGNYDIVLGTRYAGGGGVYGWDMKRKIISRG 145 (238)
T ss_pred cCccc-chHHHHhhhhhc---cCCeEEEEeCccCCCchhHHHHHHHh-hccCcceeeeeeEcCCCceecchhhHHHHhhh
Confidence 65555 888999999999 99999999999999999999999986 566778888876544432111111110 1111
Q ss_pred cchhhhhhcccccCccccccCCcchhhHHHHHHhCC-CCCCCccchHHHHHHHHhCCCEEEEeccCc
Q 044519 247 YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGG-WKDRTTVEDMDLAVRASLKGWKFVFVGDLG 312 (534)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg-~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~ 312 (534)
..+. .+.. ...+....+|++.++|+++++..-. -...-..--+|+..|+.++|+.+.-+|-..
T Consensus 146 An~l-a~~l--l~~~~sdltGsFrLykk~vl~~li~e~vSkGyvfqmEll~ra~~~~y~IgEvPitF 209 (238)
T KOG2978|consen 146 ANFL-ARIL--LNPGVSDLTGSFRLYKKEVLEKLIEESVSKGYVFQMELLARARQHGYTIGEVPITF 209 (238)
T ss_pred hHHH-HHHh--ccCCCccCcceeeeehHHHHHhhHHHhhccchhhhHHHHHhccccCceEeecceEE
Confidence 1111 1110 0123344689999999999886410 000112347899999999998886666443
No 72
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=99.50 E-value=3.3e-13 Score=128.97 Aligned_cols=105 Identities=17% Similarity=0.104 Sum_probs=84.0
Q ss_pred cEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCC
Q 044519 92 MVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRN 171 (534)
Q Consensus 92 ~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~ 171 (534)
+|||+||+|||++.+++||+|+..|. +++ |+|+|+|+|+|.+ ++++ .++++++. .+
T Consensus 1 ~isvii~~~Ne~~~l~~~l~sl~~~~---~ei-ivvD~gStD~t~~---------i~~~---------~~~~v~~~--~~ 56 (229)
T cd02511 1 TLSVVIITKNEERNIERCLESVKWAV---DEI-IVVDSGSTDRTVE---------IAKE---------YGAKVYQR--WW 56 (229)
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhccc---CEE-EEEeCCCCccHHH---------HHHH---------cCCEEEEC--CC
Confidence 48999999999999999999998873 243 3366679998877 6542 23455544 55
Q ss_pred CCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEE
Q 044519 172 GYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLV 223 (534)
Q Consensus 172 g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V 223 (534)
.|.+.++|.|++.+ ++|+|+++|+|..++|++++++...+.++|..+..
T Consensus 57 ~g~~~~~n~~~~~a---~~d~vl~lDaD~~~~~~~~~~l~~~~~~~~~~~~~ 105 (229)
T cd02511 57 DGFGAQRNFALELA---TNDWVLSLDADERLTPELADEILALLATDDYDGYY 105 (229)
T ss_pred CChHHHHHHHHHhC---CCCEEEEEeCCcCcCHHHHHHHHHHHhCCCCcEEE
Confidence 66999999999999 99999999999999999999999999666654333
No 73
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.40 E-value=1.8e-12 Score=121.29 Aligned_cols=106 Identities=28% Similarity=0.253 Sum_probs=85.1
Q ss_pred CCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 90 YPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 90 ~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
.|.+||+||+||+++.+.++|+|+++|++++.+ +|+|+|+|+|+|.+ ++++...+. .++... ...
T Consensus 2 ~~~~siiip~~n~~~~l~~~l~s~~~q~~~~~e-iivvddgs~d~t~~---------~~~~~~~~~----~~~~~~-~~~ 66 (291)
T COG0463 2 MPKVSVVIPTYNEEEYLPEALESLLNQTYKDFE-IIVVDDGSTDGTTE---------IAIEYGAKD----VRVIRL-INE 66 (291)
T ss_pred CccEEEEEeccchhhhHHHHHHHHHhhhhcceE-EEEEeCCCCCChHH---------HHHHHhhhc----ceEEEe-ecc
Confidence 479999999999999999999999999999855 44477779999888 666554331 233333 345
Q ss_pred CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 170 RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 170 ~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
.++|++.|+|.|+..+ .+|+++++|+|.. +++.+..+....
T Consensus 67 ~~~g~~~~~~~~~~~~---~~~~~~~~d~d~~-~~~~~~~~~~~~ 107 (291)
T COG0463 67 RNGGLGAARNAGLEYA---RGDYIVFLDADDQ-HPPELIPLVAAG 107 (291)
T ss_pred cCCChHHHHHhhHHhc---cCCEEEEEccCCC-CCHHHHHHHHHh
Confidence 6677999999999998 8899999999999 888888855544
No 74
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.37 E-value=1.8e-12 Score=124.52 Aligned_cols=210 Identities=16% Similarity=0.082 Sum_probs=142.8
Q ss_pred cCCCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEE
Q 044519 87 NKSYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKY 164 (534)
Q Consensus 87 ~~~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~ 164 (534)
++++|.+||+|.-+||. ..+.+|+.|+..-+-++.--+|+ |+|+|+.+-.+ +-++++...+ +-.+++
T Consensus 151 pe~Lpt~SVviVFHNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdKehLk--------ekLDeYv~~f---nGlVkV 219 (603)
T KOG3737|consen 151 PENLPTSSVVIVFHNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDKEHLK--------EKLDEYVKLF---NGLVKV 219 (603)
T ss_pred cccCCcceEEEEEecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCccHHHH--------HHHHHHHHHh---cCEEEE
Confidence 47899999999999999 99999999998866554433444 44557666666 6667776665 345666
Q ss_pred EEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC----------C
Q 044519 165 ETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNAD----------E 234 (534)
Q Consensus 165 ~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~----------~ 234 (534)
++.+++. |-..|+..|.++| .||.++++||.|.+.-+||.-++.++..|..+--| .-....+.+ .
T Consensus 220 ~Rne~RE-GLI~aRSiGA~~a---tGeV~ifLDAHCEVntNWlpPLlAPI~rdRtvmTV-P~IDgId~n~~EyrpvyG~d 294 (603)
T KOG3737|consen 220 FRNERRE-GLIQARSIGAQKA---TGEVLIFLDAHCEVNTNWLPPLLAPISRDRTVMTV-PLIDGIDGNTYEYRPVYGGD 294 (603)
T ss_pred Eecchhh-hhhhhhccchhhc---cccEEEEEecceeeecccccccccccccCceEEEE-eeeeeecCCceEEeeccCCc
Confidence 6444444 4888899999998 99999999999999999999999998555433221 111111111 1
Q ss_pred chhhHhHhhhcccch------hhhhh---cccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCC
Q 044519 235 CLMTRLQEMSLDYHF------SVEQE---VGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKG 302 (534)
Q Consensus 235 ~~~~~~~~~~~~~~~------~~~~~---~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G 302 (534)
+-..+. .+++...+ ..++. ..+.....+.-.|.-+++.|+.+.+.|.||+... +|.+|+++++++-|
T Consensus 295 n~h~rG-ifeWgmLyKe~~~t~rE~r~RkhnsePyRSPthAGGLfAInRe~F~ELG~YDpgLqiWGGEnfElSfKIWQCG 373 (603)
T KOG3737|consen 295 NDHARG-IFEWGMLYKEVPLTPREKRLRKHNSEPYRSPTHAGGLFAINREFFFELGLYDPGLQIWGGENFELSFKIWQCG 373 (603)
T ss_pred chhhcc-hhhhhheeccCCCCHHHHHhhhccCCCCCCcccccceeeehHHHHHHhccCCCcceeecCcceeEEEEEEeeC
Confidence 100000 00111111 11111 1122222333468889999999999999998654 89999999999999
Q ss_pred CEEEEeccCcc
Q 044519 303 WKFVFVGDLGV 313 (534)
Q Consensus 303 ~ki~~~~~~~~ 313 (534)
-++.++|-..+
T Consensus 374 G~i~fVPCSrV 384 (603)
T KOG3737|consen 374 GKILFVPCSRV 384 (603)
T ss_pred CEEEEEEcccc
Confidence 99999997664
No 75
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.36 E-value=1e-12 Score=126.61 Aligned_cols=205 Identities=18% Similarity=0.128 Sum_probs=148.9
Q ss_pred CCCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEE-EEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 88 KSYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIV-QVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 88 ~~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I-~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
.++|+-||||.-+||+ ..+-+|+.|+++++-++.-.+| +|+|.|.|++.- +.+ .++ .+++++
T Consensus 121 ~dlp~TsviITfHNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dped~--------~~L----~ri----~kvr~L 184 (559)
T KOG3738|consen 121 VDLPPTSVIITFHNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPEDG--------KLL----KRI----PKVRVL 184 (559)
T ss_pred cCCCCceEEEEeccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChHHH--------HHH----hhh----heeeee
Confidence 4689999999999999 8999999999998855543344 455569988766 333 222 577887
Q ss_pred EecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCc-hhhH---hH
Q 044519 166 TRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADEC-LMTR---LQ 241 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~-~~~~---~~ 241 (534)
+.+++. |-...++.|.+.| ++.++.|+|+.|....+||+-+++...+| ...+|++...+.|.+.- .... +.
T Consensus 185 RN~~Re-GLirSRvrGAdvA---~a~vltFLDSHcEvN~~WLePLL~Rvaed-~trvVsPiiDvIn~dnf~Y~~asadLr 259 (559)
T KOG3738|consen 185 RNNERE-GLIRSRVRGADVA---QATVLTFLDSHCEVNEGWLEPLLERVAED-TTRVVSPIIDVINLDNFSYVGASADLR 259 (559)
T ss_pred cccchh-hhhhhhccccccc---cceEEEEEecceeecchhhHHHHHHHhhc-ccceeecccccccccccccccchhhhc
Confidence 444444 4888899999988 99999999999999999999999998555 45677777777776521 1111 10
Q ss_pred -hhhcccchhhhhhc----cc-----ccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEe
Q 044519 242 -EMSLDYHFSVEQEV----GS-----STCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFV 308 (534)
Q Consensus 242 -~~~~~~~~~~~~~~----~~-----~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~ 308 (534)
.+.+..+|..++.. .+ .....+.+.|.-.++.|+.+.+.|.|+.+.- +|..|+++|++.-|..+..+
T Consensus 260 GGFDWsLhF~We~~~~eqr~sr~~Pt~PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGslEIv 339 (559)
T KOG3738|consen 260 GGFDWSLHFKWEQMQLEQRESRADPTAPIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSLEIV 339 (559)
T ss_pred CCcceEEEEEehhcCHHHHhhccCCCCcccCccccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCeeEEE
Confidence 12333455444431 11 1112234679999999999999999997542 89999999999999999888
Q ss_pred ccCcc
Q 044519 309 GDLGV 313 (534)
Q Consensus 309 ~~~~~ 313 (534)
|-..+
T Consensus 340 PCSRV 344 (559)
T KOG3738|consen 340 PCSRV 344 (559)
T ss_pred eccch
Confidence 86654
No 76
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.26 E-value=4.8e-12 Score=131.51 Aligned_cols=211 Identities=15% Similarity=0.155 Sum_probs=149.6
Q ss_pred CCCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChh-hhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 88 KSYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNE-VLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 88 ~~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~-t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
+.+|..||||+-+||. .++-+++.|+.+..-+.--.+|+++||++|. ... +.++++.+++ ..++++
T Consensus 139 ~~Lp~~Svii~f~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l~--------~~Ld~y~k~~----~~v~i~ 206 (578)
T KOG3736|consen 139 DKLPTTSVIIIFHNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHLK--------DKLEEYVKRF----SKVRIL 206 (578)
T ss_pred cccCCCceEEEEecCCCcchhheEEeehccCChhHeEEEEEeecCcchhhhh--------hhhHHHHhhh----cceeEE
Confidence 5689999999999999 8899999999887755444456666765544 334 3455555544 337777
Q ss_pred EecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhH---hH-
Q 044519 166 TRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTR---LQ- 241 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~---~~- 241 (534)
+.+++.| +..|+..|.+.| +||.++|+|+.+.....||+-++..+.+| ...+|++.....+.+.-.... ..
T Consensus 207 r~~~R~G-LIrARl~GA~~A---~geVL~FLDsHcE~n~gWLePLL~~I~~~-r~tvv~PvID~Id~~tf~y~~~~~~~r 281 (578)
T KOG3736|consen 207 RTKKREG-LIRARLLGASMA---TGEVLTFLDSHCEVNVGWLEPLLARIAED-RKTVVCPVIDVIDDNTFEYEKQSELMR 281 (578)
T ss_pred eecchhh-hHHHHhhhhhhh---hchheeeeecceeEecCcchHHHHHhhhc-CceeecceEEeecCcCceecccCccce
Confidence 6665665 999999999999 99999999999999999999999999544 556676666655543211111 00
Q ss_pred -hhhcccchhhhh------hcc---cccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEe
Q 044519 242 -EMSLDYHFSVEQ------EVG---SSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFV 308 (534)
Q Consensus 242 -~~~~~~~~~~~~------~~~---~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~ 308 (534)
.+.+...|.... ..+ ......+...|+..+++|+.|.++|+||+..- +|..|+++|++.-|-++..+
T Consensus 282 GgFdW~l~f~w~~lP~~~~~~~~~~t~PirsPtMaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG~lei~ 361 (578)
T KOG3736|consen 282 GGFDWELTFKWERLPLPEEKRRELPTDPIRSPTMAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGGRLEIV 361 (578)
T ss_pred eeeecceeEEeccCCccHhhcccCCCCCcCCcccCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCCeEEec
Confidence 111111222111 010 11222334679999999999999999998543 79999999999999999999
Q ss_pred ccCcccc
Q 044519 309 GDLGVKN 315 (534)
Q Consensus 309 ~~~~~~~ 315 (534)
|-..+-|
T Consensus 362 PCSrVGH 368 (578)
T KOG3736|consen 362 PCSRVGH 368 (578)
T ss_pred Cccceee
Confidence 9777644
No 77
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=99.22 E-value=5.5e-10 Score=103.93 Aligned_cols=209 Identities=17% Similarity=0.091 Sum_probs=126.2
Q ss_pred cEEEEEeccCchHHHHHHHHHHH---cCCCCC---CceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEE
Q 044519 92 MVLVQIPMYNEKEVYKLSIGAAC---GLSWPS---DRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKY 164 (534)
Q Consensus 92 ~VsViIP~yne~~~l~~~L~sl~---~q~yp~---~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~ 164 (534)
.+||+||+|||+..+...++..+ +..|.. ...+|+ |+|||+|.|.+ ++-+++.++ ...++++
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T~~---------~a~k~s~K~--~~d~irV 136 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDSTVE---------VALKFSRKL--GDDNIRV 136 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhHHH---------HHHHHHHHc--CcceEEE
Confidence 69999999999965554444332 233433 444554 45669999988 666777554 3467888
Q ss_pred EEecCCCCCChhHHHHHHHhhhccCCcEEEEecCC--CCC-CHHHHHHHHHHHhc-CCcEEEEeeeeEeecCCCchhhH-
Q 044519 165 ETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDAD--FQP-DEDFLWRTIPYLLE-NKELGLVQARWKFVNADECLMTR- 239 (534)
Q Consensus 165 ~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD--~~~-~pd~L~~lv~~~~~-~~~v~~V~~~~~~~n~~~~~~~~- 239 (534)
+...+ |.||+||...|+.++ +|+++++.||| +.+ +-+.|++.+..... .++-++++|...+....+....+
T Consensus 137 ~~l~~-nrgKGgAvR~g~l~~---rG~~ilfadAdGaTkf~d~ekLe~al~~~~~p~~r~~va~GsrahLe~~~a~a~rs 212 (323)
T KOG2977|consen 137 IKLKK-NRGKGGAVRKGMLSS---RGQKILFADADGATKFADLEKLEKALNDKAGPGPRDDVACGSRAHLENTEAVAKRS 212 (323)
T ss_pred eehhc-cCCCCcceehhhHhc---cCceEEEEcCCCCccCCCHHHHHHHHHhhcCCCCCCceeecCHHHhhccHHHHHHh
Confidence 86554 445999999999999 99999999999 444 66777777765532 23444555554443321222222
Q ss_pred hHh--hhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCC-CccchHHHHHHHHhCCCEEEEeccCccccc
Q 044519 240 LQE--MSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDR-TTVEDMDLAVRASLKGWKFVFVGDLGVKNE 316 (534)
Q Consensus 240 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~ 316 (534)
+.. +.+.+|..+...+....... .-.+-++.|++.+.+-.|..- .-+-|.|+-+.+.+.+-.+.-+|. -|+|
T Consensus 213 ~~r~iLM~gFH~lv~~~a~rsI~DT---QcgfklftR~aa~~if~~lh~e~W~fdvEll~La~~~~ipi~ei~v--~w~E 287 (323)
T KOG2977|consen 213 VIRNILMYGFHKLVWIFAIRSIRDT---QCGFKLFTRAAARRIFPWLHVERWAFDVELLYLAKRFTIPIKEIPV--EWTE 287 (323)
T ss_pred HhhHHHHHHHHHHHHHHhcCccccc---chhHHHhHHHHHHhhcchhheeeeeccHHHHHHHHHcCCCcEEeee--EEEE
Confidence 111 11222332222222222111 123568889998888544432 236699998888887766655543 4666
Q ss_pred CCcC
Q 044519 317 LPST 320 (534)
Q Consensus 317 ~p~t 320 (534)
.+.|
T Consensus 288 IdgS 291 (323)
T KOG2977|consen 288 IDGS 291 (323)
T ss_pred cCCc
Confidence 6655
No 78
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=99.09 E-value=3.2e-09 Score=105.00 Aligned_cols=173 Identities=19% Similarity=0.176 Sum_probs=106.3
Q ss_pred EEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC-
Q 044519 93 VLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR- 170 (534)
Q Consensus 93 VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~- 170 (534)
+.|+|++||.++.+++||+|+++|........|+|.+| +.+++.+ .++.+. .+++++...+.
T Consensus 2 ~PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~---------~v~~~~-------~~i~~i~~~~~~ 65 (334)
T cd02514 2 IPVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVAD---------VAKSFG-------DGVTHIQHPPIS 65 (334)
T ss_pred cCEEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHH---------HHHhhc-------cccEEEEccccc
Confidence 57999999999999999999999852222233445544 5444333 443321 23444432211
Q ss_pred --C-C---------CChh----HHHHHHHhhhccCCcEEEEecCCCCCCHHHH---HHHHHHHhcCCcEEEEeeeeEeec
Q 044519 171 --N-G---------YKAG----ALKEGLEKQYVKDCQFVVIFDADFQPDEDFL---WRTIPYLLENKELGLVQARWKFVN 231 (534)
Q Consensus 171 --~-g---------~Ka~----aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L---~~lv~~~~~~~~v~~V~~~~~~~n 231 (534)
+ | +-+. |+|.+++.. ++++++++|+|+++.||++ +++++.+++|+.+.+|++... |
T Consensus 66 ~~~~~~~~~~~~y~~ia~hyk~aln~vF~~~---~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v~~ISa~Nd--n 140 (334)
T cd02514 66 IKNVNPPHKFQGYYRIARHYKWALTQTFNLF---GYSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSLWCISAWND--N 140 (334)
T ss_pred ccccCcccccchhhHHHHHHHHHHHHHHHhc---CCCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCEEEEEeecc--C
Confidence 1 0 0122 788888776 8999999999999999955 777888888999999998642 2
Q ss_pred CCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhC-CCCCCCccchHHHHHHH--HhCCCEE
Q 044519 232 ADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG-GWKDRTTVEDMDLAVRA--SLKGWKF 305 (534)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G-g~~~~~~~ED~~l~~rl--~~~G~ki 305 (534)
+........ .........++|.+=+.+|+++++.. .|+. -|+|..+|. +++|-.+
T Consensus 141 G~~~~~~~~---------------~~~lyrs~ff~glGWml~r~~W~e~~~~wp~----~~WD~w~R~~~~rkgr~c 198 (334)
T cd02514 141 GKEHFVDDT---------------PSLLYRTDFFPGLGWMLTRKLWKELEPKWPK----AFWDDWMRLPEQRKGREC 198 (334)
T ss_pred CcccccCCC---------------cceEEEecCCCchHHHHHHHHHHHhCCCCCC----CChHHhhcchhhhcCCcc
Confidence 111000000 00111112346777677788887762 2332 388888886 4666444
No 79
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=98.90 E-value=5.6e-09 Score=98.16 Aligned_cols=181 Identities=14% Similarity=0.207 Sum_probs=95.9
Q ss_pred EEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCC
Q 044519 93 VLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNG 172 (534)
Q Consensus 93 VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g 172 (534)
||| |.|.|.++..++|++++.++..|+.+ .| -+|+.. +. .
T Consensus 1 isi-I~c~n~~~~~~~~~~~i~~~~~~~~~-~i-~i~~~~------------------------------------~~-~ 40 (217)
T PF13712_consen 1 ISI-IICVNDEELYEECLRSIKRLIGPPGE-LI-EIDNVR------------------------------------NA-K 40 (217)
T ss_dssp EEE-EEEES-HHHHHHHHHHHHHTT--TEE-EE-EEE-SS------------------------------------S--S
T ss_pred CEE-EEEECCHHHHHHHHHHHHhhCCCCce-EE-EEeccC------------------------------------CC-c
Confidence 344 45557777888899999999888643 22 222211 11 2
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCCcEEEEe--eeeEeecCCCchhhHhHh----hhc
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYLLENKELGLVQ--ARWKFVNADECLMTRLQE----MSL 245 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~v~~V~--~~~~~~n~~~~~~~~~~~----~~~ 245 (534)
+-+.+.|.|+++| +++|+++++.|..+ +++|+.++++.|+++|++|+++ |... ..++..++..... ..+
T Consensus 41 s~~~~yN~a~~~a---~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~~G~iGvaG~~~-~~~~~~~w~~~~~~g~~~~~ 116 (217)
T PF13712_consen 41 SMAAAYNEAMEKA---KAKYLVFLHQDVFIINENWLEDILEIFEEDPNIGMIGVAGSKR-LPPNGVWWESPNKVGKVREY 116 (217)
T ss_dssp -TTTHHHHHGGG-----SSEEEEEETTEE-SSHHHHHHHHHHHHH-TTEEEEESEEEES-S-S-TTS---EEEEEETTEE
T ss_pred CHHHHHHHHHHhC---CCCEEEEEeCCeEEcchhHHHHHHHHHhhCCCccEEEeecCCc-CCCCCccccccccccccccc
Confidence 2667899999999 99999999999777 7999999999998899987765 2221 1222222211100 000
Q ss_pred ccc---hhh---hhh-c----ccccCccccccCCcchhhHHHHHHhCCCCCCCc----cchHHHHHHHHhCCCEEEEecc
Q 044519 246 DYH---FSV---EQE-V----GSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT----VEDMDLAVRASLKGWKFVFVGD 310 (534)
Q Consensus 246 ~~~---~~~---~~~-~----~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~----~ED~~l~~rl~~~G~ki~~~~~ 310 (534)
... ... ... . ......+-.+-|..++.+++.+ +|+++.. .-|.|+++++.++|+++ ++++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~avDg~ll~~~~dv~----~fde~~~~gfH~Ydvd~cl~~~~~G~~v-~~~~ 191 (217)
T PF13712_consen 117 GRIMHGHGPNSAGEVRYGGPRNDPPEEVQAVDGLLLATQKDVP----RFDEDLFTGFHFYDVDQCLEARRAGYRV-VVPP 191 (217)
T ss_dssp EE----E-------------ES-SSEEEEEE-TTEEEEETTB---------SS--SSSSHHHHHHHHHHHTT-EE-EE--
T ss_pred ccccccccccccccccccccccCCceeEEEecceEEEEEcccC----CCCccccCCcchHHHHHHHHHHHhCCEE-EecC
Confidence 000 000 000 0 0011222235699999999998 7888743 46999999999999999 6677
Q ss_pred CcccccCCcCHH
Q 044519 311 LGVKNELPSTFK 322 (534)
Q Consensus 311 ~~~~~~~p~t~~ 322 (534)
+.+.|....++.
T Consensus 192 ~~~~H~s~g~~~ 203 (217)
T PF13712_consen 192 PWCIHFSGGSFD 203 (217)
T ss_dssp ---EE-S----S
T ss_pred ceEEEcCCCCcc
Confidence 778888877654
No 80
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=98.72 E-value=7.5e-08 Score=88.92 Aligned_cols=177 Identities=16% Similarity=0.124 Sum_probs=112.7
Q ss_pred cEEEEEeccCchHHHHHHHHHHH----cCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 92 MVLVQIPMYNEKEVYKLSIGAAC----GLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 92 ~VsViIP~yne~~~l~~~L~sl~----~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
+|+|+||-+|.++.+...+..+. +|. -+..|+|+....+.
T Consensus 3 ~~aiivpyr~R~~~l~~~l~~~~~~L~rq~---~~~~i~vi~Q~~~~--------------------------------- 46 (219)
T cd00899 3 KVAIIVPFRNRFEHLLIFLPHLHPFLQRQQ---LDYRIFVIEQVGNF--------------------------------- 46 (219)
T ss_pred ceEEEEecCCHHHHHHHHHHHHHHHHHhcC---CcEEEEEEEecCCc---------------------------------
Confidence 68999999999988888776663 232 22345555443221
Q ss_pred cCCCCCChhHHHHHHHhhhc-cCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcc
Q 044519 168 KNRNGYKAGALKEGLEKQYV-KDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLD 246 (534)
Q Consensus 168 ~~~~g~Ka~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~ 246 (534)
.-.|+..+|.|+..|.. .+.|++++-|.|-+|..+.+... +.+.|.-..+.-. .....
T Consensus 47 ---~FNR~~llNvG~~~a~k~~~~dc~i~hDVDllP~~~~~~y~---~~~~p~H~s~~~~---------------~~~~~ 105 (219)
T cd00899 47 ---RFNRAKLLNVGFLEALKDGDWDCFIFHDVDLLPENDRNLYG---CEEGPRHLSVPLD---------------KFHYK 105 (219)
T ss_pred ---cchhhhhhhHHHHHHhhcCCccEEEEecccccccCcccccc---CCCCCeEEEEeec---------------ccccc
Confidence 11266678998887733 24799999999999988875432 1122221111100 00000
Q ss_pred cchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEeccCcc-----cc-c-
Q 044519 247 YHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFVGDLGV-----KN-E- 316 (534)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~-----~~-~- 316 (534)
. ....+.|++++++|+.+.+++||++... +||.|+..|+..+|.++...+.... ++ +
T Consensus 106 l-------------py~~~~Gg~~~~~k~~f~~VNGf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~ 172 (219)
T cd00899 106 L-------------PYKTYFGGVLALTREQFRKVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHD 172 (219)
T ss_pred c-------------CcccccccceeeEHHHHHHhCCcCCcCccCCcchHHHHHHHHHCCCeEEeccCcccceeeeecCCC
Confidence 0 0112358899999999999999998554 6999999999999999888876553 12 1
Q ss_pred -----CCcCHHHHHHHHhhhccchhhH
Q 044519 317 -----LPSTFKAYRYQQHRWSCGPSNL 338 (534)
Q Consensus 317 -----~p~t~~~~~~Qr~RW~~G~~~~ 338 (534)
-|.-++....++.||+...+..
T Consensus 173 ~r~~~N~~r~~~l~~~~~~~~~dGLns 199 (219)
T cd00899 173 KRNRDNPNRFALLQNSRERDHSDGLNS 199 (219)
T ss_pred cccccCHHHHHHHHhhCeEeccCCccc
Confidence 1223444566677777766543
No 81
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=98.10 E-value=1.8e-05 Score=75.45 Aligned_cols=116 Identities=17% Similarity=0.205 Sum_probs=82.4
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEE-EEEcCCC--hhhhchhhhhhhHHHHHHHHHHHhh------c
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIV-QVLDDST--NEVLRTDFFQYTQKLVELECLKWIE------K 158 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I-~V~Dds~--D~t~~~~~~~~~~~~v~~~~~~~~~------~ 158 (534)
.+-|+|-|+.|..|.+..+.+-.+.+.+++||++.+.+ +++.+++ |.+.+ .+++..++.+. +
T Consensus 22 ~~~e~VLILtplrna~~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~---------~l~~~~~~~q~~~~~~~~ 92 (269)
T PF03452_consen 22 RNKESVLILTPLRNAASFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLK---------ILEAALKKLQSHGPESKR 92 (269)
T ss_pred ccCCeEEEEEecCCchHHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHH---------HHHHHHHHHhccCcccCC
Confidence 56789999999999999999999999999999998877 5667777 66665 55444444322 1
Q ss_pred CccEEEEEec----------CCCC---------CChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHH
Q 044519 159 GVNVKYETRK----------NRNG---------YKAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIP 212 (534)
Q Consensus 159 ~~~v~~~~r~----------~~~g---------~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~ 212 (534)
...+.+++.+ ++.. --|.|+|..+-.+.....+||+.+|+|.+- +|+.++.++.
T Consensus 93 F~~itIl~~df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~~P~~lI~dli~ 166 (269)
T PF03452_consen 93 FRSITILRKDFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVETPPTLIQDLIA 166 (269)
T ss_pred cceEEEEcCCCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcccCChHHHHHHHh
Confidence 2334444322 1111 134566888877766688999999999766 7777777755
No 82
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=97.85 E-value=0.00069 Score=63.06 Aligned_cols=196 Identities=15% Similarity=0.143 Sum_probs=106.4
Q ss_pred CcEEEEEeccCch--H-HHHHHHH--HHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 91 PMVLVQIPMYNEK--E-VYKLSIG--AACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 91 P~VsViIP~yne~--~-~l~~~L~--sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
|+.+++||+-..+ + .-.+.+. ++++---+.+...|+++|+++-. . ..+ ..+-++..++.|+
T Consensus 2 ~~~~~iiPv~~S~e~p~~~~R~f~~~~~~k~fts~~~~~vi~~~~~~~~--d--------~~i----~~~i~~~~~~~yl 67 (346)
T COG4092 2 QPNGEIIPVAESEELPLTDSRQFSRTSAVKVFTSSDITMVICLRAHEVM--D--------RLI----RSYIDPMPRVLYL 67 (346)
T ss_pred CCcceEeecchhhccchhHHHHHhhHhhhhhccccccEEEEEEecchhH--H--------HHH----HHHhccccceEEE
Confidence 5678889886443 2 2233333 22332234556677788885521 1 133 3333456788888
Q ss_pred EecCCCCC--ChhHHHHHHHhhhc-cCCcEEEEecCCCCCCHHHHHHHHHHHh---cCCcE-EEEeeeeEeecCCCchhh
Q 044519 166 TRKNRNGY--KAGALKEGLEKQYV-KDCQFVVIFDADFQPDEDFLWRTIPYLL---ENKEL-GLVQARWKFVNADECLMT 238 (534)
Q Consensus 166 ~r~~~~g~--Ka~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~~lv~~~~---~~~~v-~~V~~~~~~~n~~~~~~~ 238 (534)
.-..++.. -+...|.|...+.. -+.++|+++|+||....|-..+++.... -..++ +...-++.+.|...+..-
T Consensus 68 ~~~s~~~F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l~~~~ikk~~tnI~a~~vlPV~~LNk~~~~v~ 147 (346)
T COG4092 68 DFGSPEPFASETICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKMLSIATIKKMRTNIDAPLVLPVYHLNKADTQVF 147 (346)
T ss_pred ecCCCccccchhhhhhccchhhhccccccEEEEEeccccccHHHHHHHHHHHHHHHHHhccCcceeeeeeecchhhhhHH
Confidence 54333321 24455666666521 2489999999999999776666653221 01233 334445566776433211
Q ss_pred -HhHhhhcccch--hhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHh
Q 044519 239 -RLQEMSLDYHF--SVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASL 300 (534)
Q Consensus 239 -~~~~~~~~~~~--~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~ 300 (534)
....+.++... ......+....-+.....+..++.|+.+...||++++.. +||.|+..|+..
T Consensus 148 f~~~d~f~d~~i~es~~~~~~~~~~ff~~~~T~~~liN~~~F~~tgGydE~F~GhG~EDfe~~~R~~l 215 (346)
T COG4092 148 FDVEDMFLDAMIFESPLAEFRKEDNFFIAPYTNIFLINRRMFSLTGGYDERFRGHGSEDFEFLTRLGL 215 (346)
T ss_pred HHHHHHhhhhHhhhhHHHHhCcccccccccccceEEEehhHHHHhcCCccccccCCchhHHHHHHHHH
Confidence 11111111100 000011112222223345667899999999999998654 799999998864
No 83
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=97.67 E-value=0.00034 Score=68.26 Aligned_cols=131 Identities=18% Similarity=0.235 Sum_probs=72.5
Q ss_pred CCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 90 YPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 90 ~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
+-..+|+||+.||+ +.++..|.++ |++..+| |+.+|+.... +.|+.-.++++.+|+.- .-++..+|..
T Consensus 49 l~~maIVVP~KnE~l~lleGVL~gI-----Ph~C~II-vVSNS~r~~~--d~f~~E~d~l~~f~~~t---~r~~~~vHQk 117 (381)
T PF09488_consen 49 LSKMAIVVPCKNEKLKLLEGVLSGI-----PHDCLII-VVSNSSREPV--DRFKMEVDLLKHFCRLT---RRQIIIVHQK 117 (381)
T ss_dssp HTTEEEEEEESS--HHHHHHHHHCS------TTSEEE-EEE---CSSS--CHHHHHHHHHHHHHHHC---T--EEEEETT
T ss_pred HhCcEEEEECCCCchhhhhhhhhcC-----CCCCeEE-EEECCCCCCc--cHHHHHHHHHHHHHHhh---cCceEEEecC
Confidence 45789999999999 7777766655 7776666 6666554332 23444446777776541 2334444431
Q ss_pred -----------------CC----CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHH---HHHH-hcCCcEEEE
Q 044519 169 -----------------NR----NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT---IPYL-LENKELGLV 223 (534)
Q Consensus 169 -----------------~~----~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l---v~~~-~~~~~v~~V 223 (534)
.. +.||+.++-.|+-.|.....+||-|+|||...+-..-+.+ ...| .+.....+|
T Consensus 118 Dp~lA~Af~~aGy~~il~~~g~VR~GKgEGMiiGillAk~~g~~YVGFvDADNyiPGaV~EYvk~yAAGf~ms~spytMV 197 (381)
T PF09488_consen 118 DPGLAEAFKEAGYPEILDEDGLVRNGKGEGMIIGILLAKAPGKRYVGFVDADNYIPGAVNEYVKDYAAGFAMSESPYTMV 197 (381)
T ss_dssp -HHHHHHHHHTT--TTB-TTSSB-SSHHHHHHHHHHHHHHTT-SEEEE--TTBS-HHHHHHHHHHHHHHHHC-SSSCEEE
T ss_pred CHHHHHHHHHcCcHHHhCCCCceecCchHHHHHHHHHHHhcCCceEeEeeccCCCcchHHHHHHHHHhhhcccCCCceEE
Confidence 11 1269999999998887778999999999988755433332 2222 245677788
Q ss_pred eeeeEeec
Q 044519 224 QARWKFVN 231 (534)
Q Consensus 224 ~~~~~~~n 231 (534)
--.|.+..
T Consensus 198 Ri~W~~KP 205 (381)
T PF09488_consen 198 RIHWRSKP 205 (381)
T ss_dssp EEE-----
T ss_pred EEEecCCC
Confidence 77777654
No 84
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=97.64 E-value=0.00043 Score=70.55 Aligned_cols=187 Identities=17% Similarity=0.182 Sum_probs=91.9
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
...|.+.|+|-+||.++.+.+||+++++..-..++..|+|..|+.++... +.++. + +..+.+++.
T Consensus 90 ~~~~~~pVlV~AcNRp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~--------~vi~~----y---~~~v~~i~~ 154 (434)
T PF03071_consen 90 NKEPVIPVLVFACNRPDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVA--------EVIKS----Y---GDQVTYIQH 154 (434)
T ss_dssp -------EEEEESS-TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHH--------HHHHG----G---GGGSEEEE-
T ss_pred cCCCcceEEEEecCCcHHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHH--------HHHHH----h---hhhheeeec
Confidence 45678899999999999999999999986522345556677776665555 34443 2 123444432
Q ss_pred cC------CCCC-C-------hhHHHHHHHhhhc-cCCcEEEEecCCCCCCHHHHHHH---HHHHhcCCcEEEEeeeeEe
Q 044519 168 KN------RNGY-K-------AGALKEGLEKQYV-KDCQFVVIFDADFQPDEDFLWRT---IPYLLENKELGLVQARWKF 229 (534)
Q Consensus 168 ~~------~~g~-K-------a~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~~l---v~~~~~~~~v~~V~~~~~~ 229 (534)
.. .++. | +.....|+.+... .+++.++++.+|..+.||+++.+ .+.+.+||.+-+|++--
T Consensus 155 ~~~~~i~~~~~~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~~~~ll~~D~sl~ciSawN-- 232 (434)
T PF03071_consen 155 PDFSPITIPPKEKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSATLPLLENDPSLWCISAWN-- 232 (434)
T ss_dssp S--S-----TT-GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHHHHHHHHH-TTEEEEES----
T ss_pred CCcCCceeCcccccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHHHHHHHhcCCCeEEEEccc--
Confidence 21 1110 1 1122333443322 36899999999999999999764 45567799999998752
Q ss_pred ecCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhC-CCCCCCccchHHHHHHHHhCCCEEEE
Q 044519 230 VNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG-GWKDRTTVEDMDLAVRASLKGWKFVF 307 (534)
Q Consensus 230 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G-g~~~~~~~ED~~l~~rl~~~G~ki~~ 307 (534)
.|+........ ........-.++|-+=+.+|+.++++. .|+.. .- |..+-....++|-.++.
T Consensus 233 dnG~~~~~~~~--------------~~~~lyRsdffpglGWml~r~~w~el~~~Wp~~-~W-DdwmR~~~~rkgR~cIr 295 (434)
T PF03071_consen 233 DNGKEHFVDDS--------------RPSLLYRSDFFPGLGWMLTRELWDELEPKWPKA-FW-DDWMRQPEQRKGRQCIR 295 (434)
T ss_dssp TT-BGGGS-TT---------------TT-EEEESS---SSEEEEHHHHHHHGGG--SS--H-HHHHTSHHHHTT-EEEE
T ss_pred cCCccccccCC--------------CccceEecccCCchHHHhhHHHHHhhcccCCCC-Cc-hhhhcCccccCCCceee
Confidence 12111110000 001111222357888899999999875 36532 22 33344445678877665
No 85
>KOG3588 consensus Chondroitin synthase 1 [Carbohydrate transport and metabolism]
Probab=97.62 E-value=0.0019 Score=62.87 Aligned_cols=202 Identities=18% Similarity=0.167 Sum_probs=116.4
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
-+.|.|.+++|..++.....+...+++...-.+-++.|+...-|.|+..++ +.+ ..++.+..++..+..
T Consensus 226 i~~pgih~i~pl~gr~~~f~rf~q~~c~~~d~~l~l~vv~f~~se~e~ak~-------e~~----tslra~f~~~q~l~l 294 (494)
T KOG3588|consen 226 IEDPGIHMIMPLRGRAAIFARFAQSICARGDDRLALSVVYFGYSEDEMAKR-------ETI----TSLRASFIPVQFLGL 294 (494)
T ss_pred ccCCCceEEEeccchHHHhhhhhHHHhccCCCceEEEEEEecCCChHHHhh-------hHH----HHHhhcCCceEEecc
Confidence 356889999999999999999999988765444444443333455554441 122 233334456655532
Q ss_pred cCCCCCChhHHHHHHHhhhccCCc-EEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeE-eecCCCchhhHhHhhhc
Q 044519 168 KNRNGYKAGALKEGLEKQYVKDCQ-FVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWK-FVNADECLMTRLQEMSL 245 (534)
Q Consensus 168 ~~~~g~Ka~aln~gl~~a~~~~~d-~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~-~~n~~~~~~~~~~~~~~ 245 (534)
+..-..+.||..|.+.. +.+ .+.+.|.|....-++|.++-..- -|+--+--+... ..|+ ..+.. |...
T Consensus 295 -ngeFSRa~aL~vGAe~~---~~nvLLFfcDVDi~FT~efL~rcr~Nt--~~gkqiyfPivFS~ynp-~ivy~--~~~~- 364 (494)
T KOG3588|consen 295 -NGEFSRAKALMVGAETL---NANVLLFFCDVDIYFTTEFLNRCRLNT--ILGKQIYFPIVFSQYNP-EIVYE--QDKP- 364 (494)
T ss_pred -cchhhhhHHHHhhHHHh---ccceeEEEeccceeehHHHHHHHhhcc--CCCceEEEEEEEeecCc-ceeec--CCCC-
Confidence 22234777899998886 455 45567999999999999874332 233222211111 1122 11111 1000
Q ss_pred ccchhhhhhcc--cccCcccccc-CCcchhhHHHHHHhCCCCCCC---ccchHHHHHHHHhCCCEEEEeccCccc
Q 044519 246 DYHFSVEQEVG--SSTCQFFGFN-GTAGVWRIQAIEDAGGWKDRT---TVEDMDLAVRASLKGWKFVFVGDLGVK 314 (534)
Q Consensus 246 ~~~~~~~~~~~--~~~~~~~~~~-G~~~~~Rr~~l~~~Gg~~~~~---~~ED~~l~~rl~~~G~ki~~~~~~~~~ 314 (534)
...++... ...+.+-.+. |-.+.+ |+.+.++||||.+. -.||.++-.+..+.|.+++-.|++-..
T Consensus 365 ---~p~e~~~~~~~~tGfwRdfGfGmtc~y-rsd~~~vgGFD~~I~GWG~EDV~Ly~K~v~~~l~viR~p~pGl~ 435 (494)
T KOG3588|consen 365 ---LPAEQQLVIKKDTGFWRDFGFGMTCQY-RSDFLTVGGFDMEIKGWGGEDVDLYRKYVHSGLKVIRTPEPGLF 435 (494)
T ss_pred ---CchhHheeeccccccccccCCceeEEe-eccceeecCcceeeeccCcchHHHHHHHHhcCcEEEecCCCceE
Confidence 00111100 0111111122 444444 56677899999643 379999999999999999999987643
No 86
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=97.59 E-value=0.00067 Score=66.18 Aligned_cols=130 Identities=17% Similarity=0.201 Sum_probs=79.0
Q ss_pred CCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 89 SYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 89 ~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
-.-..+|+|||.||. ..++..|.++ |++..+| |+.+|+.+.. +.|+...++++.+|+-- + -++..++.
T Consensus 49 i~~~mAIVVP~KdE~l~lleGVL~gI-----Ph~c~iI-vVSNS~r~~~--d~f~~E~dlv~~f~~~t-~--r~~i~vHQ 117 (393)
T PRK14503 49 ILGRMAIVVPVKNERLKLLEGVLKGI-----PHECPII-VVSNSKREPP--DRFKLEVDLVRHFYRLT-Q--RPIIIVHQ 117 (393)
T ss_pred HHhCcEEEEEcCCCchhHHhhHhhcC-----CCCCeEE-EEeCCCCCCc--hHHHHHHHHHHHHHhhh-c--CceEEEEc
Confidence 345789999999999 7666666555 7776666 6667654332 24444446676666531 1 22233322
Q ss_pred c-----------------CC----CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHH---HHHH-hcCCcEEE
Q 044519 168 K-----------------NR----NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT---IPYL-LENKELGL 222 (534)
Q Consensus 168 ~-----------------~~----~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l---v~~~-~~~~~v~~ 222 (534)
. .. +.||+.++-.|+-.|.....+||-|+|||...+-..-+.+ ...| .+.....+
T Consensus 118 kDp~la~Af~~aGyp~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDADNyiPGaV~EYvk~yAAGf~ma~spytM 197 (393)
T PRK14503 118 KDPGLAEALKEAGYPYILDENGLVRSGKGEGMIIGLLLAKALGARYVGFVDADNYIPGAVNEYVKIYAAGFLMAESPYTM 197 (393)
T ss_pred CCHHHHHHHHHcCChhhhCCCCceecCcchHHHHHHHHHHHhCCCeEeEeecccCCCchHHHHHHHHHhhhcccCCCCce
Confidence 1 11 1269999999998876678999999999988765433332 2222 12233455
Q ss_pred EeeeeEe
Q 044519 223 VQARWKF 229 (534)
Q Consensus 223 V~~~~~~ 229 (534)
|--.|.+
T Consensus 198 VRi~W~~ 204 (393)
T PRK14503 198 VRIHWRY 204 (393)
T ss_pred EEEEecC
Confidence 5555543
No 87
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=97.57 E-value=0.00076 Score=65.39 Aligned_cols=130 Identities=16% Similarity=0.179 Sum_probs=78.9
Q ss_pred CCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 89 SYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 89 ~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
-.-..+|+|||.||. ..++..|.++ |++..+| |+.+|+.+.. +.|+...++++.+|+-- .-++..++.
T Consensus 48 i~~~maIVVP~KdE~l~lleGVL~gI-----Ph~c~iI-vVSNS~r~~~--d~f~~E~d~~~~f~~~t---~r~~i~vHQ 116 (381)
T TIGR02460 48 LLGKTAIVVPVKNEKLHLLEGVLSGI-----PHECPII-IVSNSKREPP--DRFKMEVDLIRHFSNLT---HRKIIIIHQ 116 (381)
T ss_pred HHhCcEEEEEcCCCchhHHhhHhhcC-----CCCCeEE-EEeCCCCCCh--hHHHHHHHHHHHHHHhh---cCceEEEEc
Confidence 345789999999999 6666666554 7776666 6666654332 24444445676666531 122333332
Q ss_pred c------------------C---CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHH---HHH-hcCCcEEE
Q 044519 168 K------------------N---RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTI---PYL-LENKELGL 222 (534)
Q Consensus 168 ~------------------~---~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv---~~~-~~~~~v~~ 222 (534)
. + -+.||+.++-.|+-.|.....+||-|+|||...+-..-+.+- ..| .+.....+
T Consensus 117 kDp~la~Af~~~gy~~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDaDNyiPGaV~EYvk~yAaGf~ma~spy~M 196 (381)
T TIGR02460 117 KDPALAEAFKEVGYTSILGENGRVRSGKGEGMLLGLLLAKAIGAEYVGFVDADNYFPGAVNEYVKIYAAGFLMATSPYSM 196 (381)
T ss_pred CCHHHHHHHHHcCchhhhCCCCceecCcchHHHHHHHHHHHhCCceEeEeecccCCCchHHHHHHHHHhhhcccCCCCee
Confidence 1 1 112699999999988766789999999999887654333332 222 12233455
Q ss_pred EeeeeEe
Q 044519 223 VQARWKF 229 (534)
Q Consensus 223 V~~~~~~ 229 (534)
|--.|.+
T Consensus 197 VRi~W~~ 203 (381)
T TIGR02460 197 VRIHWRY 203 (381)
T ss_pred EEEEecC
Confidence 5555543
No 88
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=97.36 E-value=0.0094 Score=63.38 Aligned_cols=205 Identities=18% Similarity=0.134 Sum_probs=113.0
Q ss_pred CCCcEEEEEeccCc-hHHHHHHHHHHHc---CCCCCCceEEEEEcCC-ChhhhchhhhhhhHHHHHHHHHHHhhcCccEE
Q 044519 89 SYPMVLVQIPMYNE-KEVYKLSIGAACG---LSWPSDRLIVQVLDDS-TNEVLRTDFFQYTQKLVELECLKWIEKGVNVK 163 (534)
Q Consensus 89 ~~P~VsViIP~yne-~~~l~~~L~sl~~---q~yp~~~~~I~V~Dds-~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~ 163 (534)
+...|.||||+.+. .+.+.+-++...+ +.-.+-.+.| |...+ .|..... ...+.++++.+++ ...++.
T Consensus 245 ~~~~V~iIvPl~~r~~~~~~~Fl~~~~~~~l~~~~~~~L~v-V~~~~~~~~~~~~----~ik~~l~~l~~k~--~~~~i~ 317 (499)
T PF05679_consen 245 ESTRVHIIVPLSGREADWFRRFLENFEKVCLETDDNVFLTV-VLFYDPSDSDSIS----QIKELLEELERKY--PFSRIK 317 (499)
T ss_pred CCCEEEEEEEecCccHHHHHHHHHHHHHHhcccCCceEEEE-EEecCcccchhHH----HHHHHHHHHHHhC--CccceE
Confidence 34789999999999 6777777766543 2211222333 44433 3322110 0113555555554 346677
Q ss_pred EEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEe--ecCCCchhhHhH
Q 044519 164 YETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKF--VNADECLMTRLQ 241 (534)
Q Consensus 164 ~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~--~n~~~~~~~~~~ 241 (534)
++......-.++.+++.|++.. ...+++.++|.|..+++|+|.++-..-... -- |--|..+ .|++...-. ..
T Consensus 318 ~i~~~~~~fsr~~~Ld~g~~~~--~~d~L~f~~Dvd~~f~~~fL~rcR~nti~g--~q-vy~PI~Fs~y~p~~~~~~-~~ 391 (499)
T PF05679_consen 318 WISVKTGEFSRGAALDVGAKKF--PPDSLLFFCDVDMVFTSDFLNRCRMNTIPG--KQ-VYFPIVFSQYNPDIVYAG-KP 391 (499)
T ss_pred EEEecCCCccHHHHHHhhcccC--CCCcEEEEEeCCcccCHHHHHHHHHhhhcC--cE-EEEeeeccccCCcccccC-CC
Confidence 7765534445888999999864 567899999999999999999985443122 11 1222222 122210000 00
Q ss_pred hhhcccchhhhhhcccccCcccccc-CCcchhhHHHHHHh--CCCCCC---CccchHHHHHHHHhCC--CEEEEeccCcc
Q 044519 242 EMSLDYHFSVEQEVGSSTCQFFGFN-GTAGVWRIQAIEDA--GGWKDR---TTVEDMDLAVRASLKG--WKFVFVGDLGV 313 (534)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~Rr~~l~~~--Gg~~~~---~~~ED~~l~~rl~~~G--~ki~~~~~~~~ 313 (534)
.....+.. ....|.+-.++ |-.++++.+ +.++ ||++.. ...||.|+.-+..+.| .++.-.+++..
T Consensus 392 --~~~~~~~i----~~~~G~w~~~gfg~~~~YksD-y~~~~~~~~~~~~~gwg~ED~~l~~~~l~~~~~l~V~Ra~ep~L 464 (499)
T PF05679_consen 392 --PEPDQFDI----SKDTGFWRRFGFGMVCFYKSD-YMRIRGGGFDLSIRGWGGEDVDLYDKFLKSGHKLHVFRAVEPGL 464 (499)
T ss_pred --CccccCcc----CCCCCccccCCCceEEEEhhh-hhhhcccccccccccccccHHHHHHHHHhCCCceEEEEccCCCe
Confidence 00000111 11111111111 445555554 5555 667653 3489999999999999 78887777653
No 89
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.07 E-value=0.0045 Score=66.64 Aligned_cols=111 Identities=16% Similarity=0.207 Sum_probs=72.3
Q ss_pred CCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 89 SYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 89 ~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
-.-..+|+|||.||+ ..++..|.++ |++..+| |+.+|+.+... .|+...++++.+|+-- . -++..+|.
T Consensus 53 ~~~~~aivvp~k~e~~~~~~gvl~~i-----p~~c~ii-~vsns~r~~~d--~~~~e~~~~~~~~~~~-~--~~~~~vhq 121 (694)
T PRK14502 53 VEKKMAIVLPIKDEDLKVFEGVLSGI-----PHDCLMI-VISNSSKQEVD--NFKNEKDIVNRFCRIT-H--RQAIVVHQ 121 (694)
T ss_pred HHhCcEEEEEcCCCchhHHhhHhhcC-----CCCCeEE-EEeCCCCCchH--HHHHHHHHHHHHHHhh-c--CceEEEEc
Confidence 345789999999999 7677666555 7776666 67776543322 3444445676666532 1 12223322
Q ss_pred c--------------------C-CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHH
Q 044519 168 K--------------------N-RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 168 ~--------------------~-~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l 210 (534)
. . -+.||+.++-.|+-.|.....+||-|+|||...+-...+.+
T Consensus 122 ~dp~~a~a~~~~g~~~~~~~~~~vr~gk~egm~~g~~la~~~g~~yvgfidadny~pg~v~ey~ 185 (694)
T PRK14502 122 KNPELANAIADAGYPELLGEDGLIRSGKAEGMILGIILTMFSGRDYVGFIDTDNYIPGAVWEYA 185 (694)
T ss_pred CCHHHHHHHHHcCChhhhCCCCceecCcchHHHHHHHHHHhcCCceEeEeeccCCCCchHHHHH
Confidence 1 1 11269999999998887778999999999988765544443
No 90
>KOG3916 consensus UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase [Carbohydrate transport and metabolism]
Probab=97.03 E-value=0.0027 Score=61.51 Aligned_cols=136 Identities=18% Similarity=0.204 Sum_probs=79.9
Q ss_pred ChhHHHHHHHhhhc-cCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhh
Q 044519 174 KAGALKEGLEKQYV-KDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVE 252 (534)
Q Consensus 174 Ka~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 252 (534)
+|.-+|.|+..|.. ...|-+++-|.|.+|..|- |. ..|+.. ...+...+.... |.
T Consensus 199 RakL~NVGf~eAlkd~~wdCfIFHDVDllPenDr----------Nl---Y~C~~~-----PRH~sva~dk~g----y~-- 254 (372)
T KOG3916|consen 199 RAKLLNVGFLEALKDYGWDCFIFHDVDLLPENDR----------NL---YGCPEQ-----PRHMSVALDKFG----YR-- 254 (372)
T ss_pred HHHhhhhHHHHHHHhcCCCEEEEecccccccCCC----------Cc---cCCCCC-----Ccchhhhhhhcc----cc--
Confidence 56667888887743 4678899999999886541 10 011110 011111111110 00
Q ss_pred hhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEeccCcc-----cc----c--CC
Q 044519 253 QEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFVGDLGV-----KN----E--LP 318 (534)
Q Consensus 253 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~-----~~----~--~p 318 (534)
.....+-|.-.++.++-++++.||+.... +||-|+.-|+...|++|---|.... .+ + -|
T Consensus 255 -------LPY~~~FGGVsalt~~qf~kINGFsN~fWGWGGEDDDl~nRv~~ag~~IsRp~~~igrYkMikH~~k~n~~n~ 327 (372)
T KOG3916|consen 255 -------LPYKEYFGGVSALTKEQFRKINGFSNAFWGWGGEDDDLWNRVQLAGMKISRPPPEIGRYKMIKHHDKGNEPNP 327 (372)
T ss_pred -------ccchhhhCchhhccHHHHHHhcCCCchhcccCCcchHHHHHHHhcCceeecCCCccceeEEeecccccCCCCh
Confidence 00111347778899999999999997544 8999999999999999854332221 11 1 13
Q ss_pred cCHHHHHHHHhhhccchhhHHh
Q 044519 319 STFKAYRYQQHRWSCGPSNLFS 340 (534)
Q Consensus 319 ~t~~~~~~Qr~RW~~G~~~~~~ 340 (534)
..++-+.+-..||.+..+..+.
T Consensus 328 ~Ry~lL~~tk~r~~~DGLnsl~ 349 (372)
T KOG3916|consen 328 GRYKLLRNTKERQTQDGLNSLK 349 (372)
T ss_pred HHHHHHHhhhhhhhhcccccee
Confidence 3455556666777776665443
No 91
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=96.87 E-value=0.00079 Score=51.98 Aligned_cols=49 Identities=29% Similarity=0.202 Sum_probs=35.1
Q ss_pred cccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEeccCc
Q 044519 264 GFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFVGDLG 312 (534)
Q Consensus 264 ~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~ 312 (534)
.+.|+..+++|+.++++|||++... .||.|+..|+..+|.++...+...
T Consensus 18 ~~~Gg~~~~~~~~f~~vnGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~~~ 69 (78)
T PF02709_consen 18 NFFGGVFAISREDFEKVNGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPGSI 69 (78)
T ss_dssp T---SEEEEEHHHHHHTTSS-SS-TSCSSHHHHHHHHHHHTT---B-SSTTT
T ss_pred CeeEEEEEEeHHHHHHcCCCCccccccCccHHHHHHHHHHcCCeEEecCCce
Confidence 3569999999999999999998655 699999999999999987766544
No 92
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=96.81 E-value=0.0038 Score=50.50 Aligned_cols=82 Identities=16% Similarity=0.083 Sum_probs=50.9
Q ss_pred cCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCC--C-CChh
Q 044519 100 YNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRN--G-YKAG 176 (534)
Q Consensus 100 yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~--g-~Ka~ 176 (534)
+||+..|.+.|....++... ++.| ++|+|+|+|.+ ++++. .++.++....+. . .+..
T Consensus 1 rne~~~L~~wl~~~~~lG~d--~i~i-~d~~s~D~t~~---------~l~~~--------~~v~i~~~~~~~~~~~~~~~ 60 (97)
T PF13704_consen 1 RNEADYLPEWLAHHLALGVD--HIYI-YDDGSTDGTRE---------ILRAL--------PGVGIIRWVDPYRDERRQRA 60 (97)
T ss_pred CChHHHHHHHHHHHHHcCCC--EEEE-EECCCCccHHH---------HHHhC--------CCcEEEEeCCCccchHHHHH
Confidence 69999999999999887653 3444 67779998877 65432 223344332211 1 1222
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCC
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPD 203 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~ 203 (534)
.++...+. ..++|+++++|+|-.+.
T Consensus 61 ~~~~~~~~--~~~~dWvl~~D~DEfl~ 85 (97)
T PF13704_consen 61 WRNALIER--AFDADWVLFLDADEFLV 85 (97)
T ss_pred HHHHHHHh--CCCCCEEEEEeeeEEEe
Confidence 33333333 24889999999996653
No 93
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=96.60 E-value=0.014 Score=55.30 Aligned_cols=93 Identities=15% Similarity=0.104 Sum_probs=62.6
Q ss_pred HHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHHHHhhh
Q 044519 107 KLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQY 186 (534)
Q Consensus 107 ~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~gl~~a~ 186 (534)
.-||.|+.+|+-|++.+.|++.++.+++ .. +.++++++.+ ++++.+..++ +....++...++.+.
T Consensus 45 ~~~LpSl~~QTd~dF~~lv~~~~~~P~~-~~--------~rL~~l~~~~----p~~~i~~~~~--~~~~~~~~~~~~~~~ 109 (234)
T PF11316_consen 45 TYCLPSLRAQTDQDFTWLVLFDDDLPEP-YR--------ERLRDLLADY----PQFRIVFRPP--GPHRDAMRRAINAAR 109 (234)
T ss_pred HHHhhHHHhccCCCeEEEEEECCCCCHH-HH--------HHHHHHhccC----CCcEEEecCC--chHHHHHHHHHhhhc
Confidence 4589999999999888777444444443 33 3555555443 3455553433 325567777775544
Q ss_pred ccCCcEEEEe--cCCCCCCHHHHHHHHHHH
Q 044519 187 VKDCQFVVIF--DADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 187 ~~~~d~v~~l--DaD~~~~pd~L~~lv~~~ 214 (534)
....++++.+ |+|+-++.|+++++-...
T Consensus 110 ~~~~~~~~~~RLDdDDAl~~dFV~rlr~~a 139 (234)
T PF11316_consen 110 RDGADPVLQFRLDDDDALHRDFVARLRRAA 139 (234)
T ss_pred cCCCCEEEEEEECCcchhhHHHHHHHHHHH
Confidence 4567777665 999999999999998876
No 94
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants []. It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction
Probab=96.05 E-value=0.01 Score=57.61 Aligned_cols=36 Identities=19% Similarity=0.201 Sum_probs=28.8
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHh
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLL 215 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~ 215 (534)
.+|.|+-.+ +.||++.+|+|+.|..|.--..+..+.
T Consensus 82 ~R~fGyL~s---~~~yivsiDDD~~P~~D~~g~~~~~v~ 117 (348)
T PF03214_consen 82 CRNFGYLVS---KKDYIVSIDDDCLPAKDDFGTHIDAVA 117 (348)
T ss_pred hhhhHhhhc---ccceEEEEccccccccCCccceehhhh
Confidence 468898887 889999999999998777665555553
No 95
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=95.74 E-value=0.027 Score=54.44 Aligned_cols=103 Identities=18% Similarity=0.117 Sum_probs=69.7
Q ss_pred cEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec--C
Q 044519 92 MVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK--N 169 (534)
Q Consensus 92 ~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~--~ 169 (534)
.++-.|=+.||+..++++|+|++-.- ++. |+.-+||+|+|.+ ++.++|+++|+. .++.|-... .
T Consensus 88 ~~~~~iRvKnE~~tl~~si~S~Lpai---~~g-VI~yNdc~D~t~E---------iil~fckkyP~f-ip~~Ypy~v~~~ 153 (347)
T PF06306_consen 88 NPWAFIRVKNEAMTLAESIESILPAI---DEG-VIGYNDCTDGTEE---------IILEFCKKYPSF-IPIKYPYEVIIK 153 (347)
T ss_pred CcceEEEEcchhhhHHHHHHHHHHHH---hcc-EEEeecCCCCHHH---------HHHHHHHhCccc-ccccCcchhhcc
Confidence 57888999999999999999997522 234 4478999999976 899999998752 333331110 1
Q ss_pred CCC----CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHH
Q 044519 170 RNG----YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 170 ~~g----~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l 210 (534)
+.. .+..=-|.++... .+++|++=+|+|.+.+++-|-+.
T Consensus 154 n~~~~~n~l~~YYNy~ls~i--pk~~w~iKID~DhIy~~~KL~ks 196 (347)
T PF06306_consen 154 NPKSEENSLYNYYNYVLSFI--PKNEWAIKIDADHIYDTKKLYKS 196 (347)
T ss_pred CCchhhhhhhhhhhhhhccc--ccceEEEEeccceeecHHHHhhh
Confidence 111 0111224444332 47899999999999999877554
No 96
>KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism]
Probab=95.69 E-value=0.22 Score=48.80 Aligned_cols=176 Identities=16% Similarity=0.113 Sum_probs=104.5
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCC-CceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHh--h----cCc
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPS-DRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWI--E----KGV 160 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~-~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~--~----~~~ 160 (534)
...|.+.|++=++|.++.++++++.++.+. |. ++.-|+|.-|+.++.+. +.++.+-.... . ...
T Consensus 64 ~~~~v~pvvVf~csR~~~lr~~v~kll~yr-PsaekfpiiVSQD~~~e~vk--------~~~~~~g~~v~~i~~~~h~~~ 134 (411)
T KOG1413|consen 64 NWPPVIPVVVFACSRADALRRHVKKLLEYR-PSAEKFPIIVSQDCEKEAVK--------KKLLSYGSDVSHIQHPMHLKD 134 (411)
T ss_pred CCCCceeEEEEecCcHHHHHHHHHHHHHhC-cchhhcCEEEeccCCcHHHH--------HHHHHhccchhhhcCcccccc
Confidence 345678899999999999999999999877 54 45566688777776666 34433322110 0 011
Q ss_pred cEEEEEec-CCCCCChh------HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHH---HHHHhcCCcEEEEeeeeEee
Q 044519 161 NVKYETRK-NRNGYKAG------ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT---IPYLLENKELGLVQARWKFV 230 (534)
Q Consensus 161 ~v~~~~r~-~~~g~Ka~------aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l---v~~~~~~~~v~~V~~~~~~~ 230 (534)
.+.+-.+. +.++++.- |+|+.+.. .+.+.+++.-+|--..||+.... ...+..||.+-+|+.-- .
T Consensus 135 ei~v~~~~~k~~~Yy~IarHYkwAL~q~F~~---~~~s~vii~eDDl~iapDFF~YF~~t~~llk~D~siwcvsaWN--D 209 (411)
T KOG1413|consen 135 EISVPPRHKKFNAYYKIARHYKWALNQLFIV---FRESRVIITEDDLNIAPDFFSYFRNTIILLKGDPSIWCVSAWN--D 209 (411)
T ss_pred ccccCCcccccchhHHHHHHHHHHHhhHHhh---cCCceeEEecchhhhhhHHHHHHHHHHHHHhcCCceEEeeeec--c
Confidence 11111111 12222322 34444433 48899999999999999988764 44556788887775532 2
Q ss_pred cCCCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCC-CCCCCccchH
Q 044519 231 NADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGG-WKDRTTVEDM 292 (534)
Q Consensus 231 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg-~~~~~~~ED~ 292 (534)
|+........+ .+.....-.|.|-+=++.++.+++... |+ ....||+
T Consensus 210 NGk~~~Id~~~--------------~~~lYRtDFFpGLGWml~~~~W~ELsp~wP-~~fWDDW 257 (411)
T KOG1413|consen 210 NGKKQTIDSTR--------------PSLLYRTDFFPGLGWMLTKKLWEELSPKWP-VAFWDDW 257 (411)
T ss_pred CCCcccccccc--------------cchhhhccccccchHHHHHHHHHhhCCCCc-ccchhhh
Confidence 33322211111 111222233578888999999999753 54 4556665
No 97
>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ].
Probab=95.12 E-value=0.25 Score=49.63 Aligned_cols=219 Identities=11% Similarity=0.067 Sum_probs=112.7
Q ss_pred EEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC--CChhh-hchh-----------hhhhhHHHHHH-HHHHHh-
Q 044519 93 VLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD--STNEV-LRTD-----------FFQYTQKLVEL-ECLKWI- 156 (534)
Q Consensus 93 VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd--s~D~t-~~~~-----------~~~~~~~~v~~-~~~~~~- 156 (534)
|-|.|+.|..++ +..||.++.++.-.++++.|-|++. ..|+. .... +-+......+. .+.+.+
T Consensus 2 IFvsiasyRD~~-c~~Tl~~~~~~A~~P~r~~~gv~~Q~~~~~~~c~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 80 (343)
T PF11397_consen 2 IFVSIASYRDPE-CAPTLKDLFARATNPERLFVGVVWQHYEEDPPCLSEGAPMDPGVHAAREEECVYCFLASSACAEWPD 80 (343)
T ss_pred EEEEEeeecCch-HHHHHHHHHHhcCCCceEEEEEEEEecCCCCcccccccccccccccccccchhhhhhhccccccccc
Confidence 568899999865 8889998877544446777766654 22222 1100 00000001100 000000
Q ss_pred ----hcCccEEEEEecCC-CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcC-CcEEEEeeeeEee
Q 044519 157 ----EKGVNVKYETRKNR-NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLEN-KELGLVQARWKFV 230 (534)
Q Consensus 157 ----~~~~~v~~~~r~~~-~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~-~~v~~V~~~~~~~ 230 (534)
....+|++++.+.. ..|-..|++.+.+.- .+-+|++.+|+.+...++|=..+++.+.+- .+-++.++.....
T Consensus 81 ~~~~~~~~~Ir~~~~~~~~a~Gp~~AR~la~~l~--~gE~y~LqiDSH~rF~~~WD~~li~~~~~~~~~~aVLS~YP~~~ 158 (343)
T PF11397_consen 81 GALCLRSDQIRVIRVDASEARGPCWARYLAQKLY--RGEDYYLQIDSHMRFVPGWDEILIEMLKSLRNPKAVLSTYPPGY 158 (343)
T ss_pred ccccccCCeEEEEEeCHHHCcChHHHHHHHHHHh--CCCeEEEEEeccceeeccHHHHHHHHHHhcCCCCeEEecCCCCc
Confidence 11345666654422 223566666666654 467899999999999999988888877432 3344555443332
Q ss_pred cC-C-C-----chhhHhHhhhc--ccchhhhhh-ccc--c--cCccccccCCcchh-hHHHHHHhCCCCCCC----ccch
Q 044519 231 NA-D-E-----CLMTRLQEMSL--DYHFSVEQE-VGS--S--TCQFFGFNGTAGVW-RIQAIEDAGGWKDRT----TVED 291 (534)
Q Consensus 231 n~-~-~-----~~~~~~~~~~~--~~~~~~~~~-~~~--~--~~~~~~~~G~~~~~-Rr~~l~~~Gg~~~~~----~~ED 291 (534)
+. + . +..+.+-...+ +........ ... . ......+.+++..| +-++++++ .+|++. .+|.
T Consensus 159 ~~~~~~~~~~~~~~~~lc~~~~~~~g~~~~~~~~~~~~~~~~~P~~~~f~aaGF~Fa~~~~~~eV-P~DP~lp~lF~GEE 237 (343)
T PF11397_consen 159 EPDGGQPEPEKTTVPRLCAARFGPDGMVRLGARWIKPAPKLEEPVPQPFWAAGFSFAPGHFVREV-PYDPHLPFLFDGEE 237 (343)
T ss_pred ccccCCccccCCcccEEEEeEECCCCcEeecceecccccccCCCeeeceecccEEEcchhheecC-CCCCCcccccccHH
Confidence 22 0 0 00001000000 000000000 000 0 01112233444444 44555555 777765 3899
Q ss_pred HHHHHHHHhCCCEEEEeccCcccc
Q 044519 292 MDLAVRASLKGWKFVFVGDLGVKN 315 (534)
Q Consensus 292 ~~l~~rl~~~G~ki~~~~~~~~~~ 315 (534)
+-++.|+..+||.+.--+...+++
T Consensus 238 ~~~aaRlwT~GYD~Y~P~~~v~~H 261 (343)
T PF11397_consen 238 ISMAARLWTHGYDFYSPTRNVLFH 261 (343)
T ss_pred HHHHHHHHHcCCccccCCCceeEE
Confidence 999999999999995555666554
No 98
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=94.52 E-value=0.59 Score=41.27 Aligned_cols=46 Identities=13% Similarity=0.163 Sum_probs=34.8
Q ss_pred CCCCCChhHHHHHHHhhh-ccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 169 NRNGYKAGALKEGLEKQY-VKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~-~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
+.|.+|-......+++-. .-+.++.+++|+.+.|.++.|.++.+.|
T Consensus 117 e~N~kKinSHrWfFnaf~~~l~P~vcvllDvGT~P~~~siy~Lwkaf 163 (163)
T PF01644_consen 117 EKNAKKINSHRWFFNAFCRQLQPNVCVLLDVGTKPGKDSIYHLWKAF 163 (163)
T ss_pred cccccccchhhHHHHHHHhhcCCcEEEEEecCCCcCchHHHHHHhhC
Confidence 445568777666665421 1388999999999999999999988764
No 99
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=94.17 E-value=0.4 Score=44.21 Aligned_cols=119 Identities=14% Similarity=0.020 Sum_probs=66.3
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeec-CCCchhhHhHhhhcccchhhhhhc
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVN-ADECLMTRLQEMSLDYHFSVEQEV 255 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n-~~~~~~~~~~~~~~~~~~~~~~~~ 255 (534)
+++.+.++. .+.+|++.+|+|+.+.++.|.+.+.....++.-..+.|...... .......++. ......
T Consensus 70 ~~~w~~~~c--~~~~~v~k~DDD~~vn~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~r~~~~kw~-------v~~~~y- 139 (195)
T PF01762_consen 70 GLKWASKHC--PNAKYVLKVDDDVFVNPDRLVSFLKSLKQDPSKNSIYGGCIKNGPPIRDPSSKWY-------VSEEEY- 139 (195)
T ss_pred HHHHHHhhC--CchhheeecCcEEEEehHHhhhhhhhcccCccccccccccccCCccccccccCce-------eeeeec-
Confidence 345555554 34899999999999999888887776522222222222221111 0000000000 000000
Q ss_pred ccccCccccccCCcchhhHHHHHHhCCCC---CCCccchHHHHHHHHhCCCEEE
Q 044519 256 GSSTCQFFGFNGTAGVWRIQAIEDAGGWK---DRTTVEDMDLAVRASLKGWKFV 306 (534)
Q Consensus 256 ~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~---~~~~~ED~~l~~rl~~~G~ki~ 306 (534)
........++|.+.++.+++++.+.... ...-.||..++.-+.+.|.+..
T Consensus 140 -~~~~yP~y~~G~~yvls~~~v~~i~~~~~~~~~~~~eDv~iGi~~~~~~i~~~ 192 (195)
T PF01762_consen 140 -PDDYYPPYCSGGGYVLSSDVVKRIYKASSHTPFFPLEDVFIGILAEKLGIKPI 192 (195)
T ss_pred -ccccCCCcCCCCeEEecHHHHHHHHHHhhcCCCCCchHHHHHHHHHHCCCCcc
Confidence 0111223357999999999998864322 2233799999999998887654
No 100
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=94.00 E-value=1.6 Score=41.17 Aligned_cols=159 Identities=17% Similarity=0.128 Sum_probs=83.5
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC----CCCCChh
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN----RNGYKAG 176 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~----~~g~Ka~ 176 (534)
+....+..+++++++....+ + |+|..| |+... +.++++ +..+.+. |+. ..-+...
T Consensus 22 ~GkpLi~~ti~~a~~s~~~d-~--IvVstd--~~~i~------------~~a~~~---g~~v~~~-r~~~l~~d~~~~~~ 80 (222)
T TIGR03584 22 CGKPMIAYSIEAALNSGLFD-K--VVVSTD--DEEIA------------EVAKSY---GASVPFL-RPKELADDFTGTAP 80 (222)
T ss_pred CCcCHHHHHHHHHHhCCCCC-E--EEEeCC--CHHHH------------HHHHHc---CCEeEEe-ChHHHcCCCCCchH
Confidence 44568899999998866432 2 334333 22222 222222 3444333 322 1224667
Q ss_pred HHHHHHHhhhc-cCCcEEEEecCCCCC-CHHHHHHHHHHHhcCCcEEEEeeeeEee-cCCCchhhHh-Hhhhcccchhhh
Q 044519 177 ALKEGLEKQYV-KDCQFVVIFDADFQP-DEDFLWRTIPYLLENKELGLVQARWKFV-NADECLMTRL-QEMSLDYHFSVE 252 (534)
Q Consensus 177 aln~gl~~a~~-~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~v~~V~~~~~~~-n~~~~~~~~~-~~~~~~~~~~~~ 252 (534)
++..|++.... .+.|.++++++|.-+ +++.+.+++..+.+ .+.+.+.+..... ++..++ .. ..-.........
T Consensus 81 si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~-~~~ds~~sv~~~~~~~~~~~--~~~~~g~~~~~~~~~ 157 (222)
T TIGR03584 81 VVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQ-PNAHFVFSVTSFAFPIQRAF--KLKENGGVEMFFPEH 157 (222)
T ss_pred HHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHh-CCCCEEEEeeccCCChHHhe--EECCCCcEEecCCCc
Confidence 78888876411 247999999999766 99999999999854 3344443332211 110000 00 000000001000
Q ss_pred h-hcccccCccccccCCcchhhHHHHHHhCCC
Q 044519 253 Q-EVGSSTCQFFGFNGTAGVWRIQAIEDAGGW 283 (534)
Q Consensus 253 ~-~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~ 283 (534)
. ..+......+..+|+..+++++.+.+-+.+
T Consensus 158 ~~~~rQd~~~~y~~nga~y~~~~~~~~~~~~~ 189 (222)
T TIGR03584 158 FNTRSQDLEEAYHDAGQFYWGKSQAWLESGPI 189 (222)
T ss_pred ccCCCCCCchheeeCCeEEEEEHHHHHhcCCc
Confidence 0 011223334456899999999999876544
No 101
>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=93.82 E-value=0.073 Score=45.20 Aligned_cols=77 Identities=16% Similarity=0.273 Sum_probs=49.1
Q ss_pred CCcEEEEEeccCchHHHHHHHHHH----HcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 90 YPMVLVQIPMYNEKEVYKLSIGAA----CGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 90 ~P~VsViIP~yne~~~l~~~L~sl----~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
.-+|+|+||-+|.++.+...+..+ .+|.- ...|+|+..+.+....
T Consensus 46 ~~kvAiIIPyRdR~~hL~~fl~~l~~~L~rQ~~---~y~I~vieQ~~~~~FN---------------------------- 94 (136)
T PF13733_consen 46 RHKVAIIIPYRDREEHLRIFLPHLHPFLQRQQL---DYRIFVIEQVDNGPFN---------------------------- 94 (136)
T ss_dssp S-EEEEEEEESS-HHHHHHHHHHHHHHHHHTT----EEEEEEEEE-SSS-------------------------------
T ss_pred ccceEEEEEeCCHHHHHHHHHHHHHHHHhhCcc---eEEEEEEeeccCCCCc----------------------------
Confidence 348999999999998888877765 23442 3556666554332211
Q ss_pred EecCCCCCChhHHHHHHHhhhc-cCCcEEEEecCCCCCCHH
Q 044519 166 TRKNRNGYKAGALKEGLEKQYV-KDCQFVVIFDADFQPDED 205 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd 205 (534)
|+.-+|.|+..|.. .+.|.+++-|.|.+|..|
T Consensus 95 --------Rg~L~NvGf~eA~~~~~~dc~ifHDVDllP~~~ 127 (136)
T PF13733_consen 95 --------RGKLMNVGFLEALKDDDFDCFIFHDVDLLPEND 127 (136)
T ss_dssp --------HHHHHHHHHHHHHHHS--SEEEEE-TTEEESBT
T ss_pred --------hhhhhhHHHHHHhhccCCCEEEEecccccccCC
Confidence 66678888887744 368999999999998654
No 102
>PLN02917 CMP-KDO synthetase
Probab=93.64 E-value=6.8 Score=38.68 Aligned_cols=184 Identities=13% Similarity=0.049 Sum_probs=91.3
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe-cCCCCCChhHHHHH
Q 044519 103 KEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR-KNRNGYKAGALKEG 181 (534)
Q Consensus 103 ~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r-~~~~g~Ka~aln~g 181 (534)
...+...++.+.+... .+. |+|..+ ++.+. +.+++ .+ +.++.+ +...+|-.++ ..|
T Consensus 72 kPLL~~vi~~a~~~~~-~~~--VVV~~~--~e~I~------------~~~~~---~~--v~vi~~~~~~~~GT~~~-~~a 128 (293)
T PLN02917 72 KPMIQRTWERAKLATT-LDH--IVVATD--DERIA------------ECCRG---FG--ADVIMTSESCRNGTERC-NEA 128 (293)
T ss_pred EEHHHHHHHHHHcCCC-CCE--EEEECC--hHHHH------------HHHHH---cC--CEEEeCCcccCCchHHH-HHH
Confidence 3478888888876542 222 334433 22222 22222 12 333322 2334454444 567
Q ss_pred HHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhH---h--hhcccch-h-h-h
Q 044519 182 LEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQ---E--MSLDYHF-S-V-E 252 (534)
Q Consensus 182 l~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~---~--~~~~~~~-~-~-~ 252 (534)
++.. ..+.|+++++++|.- .+++.+.+++..+.++++..+.+........+..-..+.. . -..-++. . + +
T Consensus 129 ~~~l-~~~~d~Vlil~gD~PlI~~~tI~~li~~~~~~~~~iv~t~~~~~~~~~~~~ygrv~vv~~~~g~alyfsr~~Ipe 207 (293)
T PLN02917 129 LKKL-EKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDASDPNRVKCVVDNQGYAIYFSRGLIPY 207 (293)
T ss_pred HHhc-cCCCCEEEEecCCcCCCCHHHHHHHHHHHHhcCCceEEEEeeecCHHHhcCCCceEEEECCCCeEEEeecCcCCc
Confidence 6654 224789999999966 5999999999988555544443332211111111111110 0 0000000 0 1 1
Q ss_pred hhc-ccccCccccccCCcchhhHHHHHHhCCCCCCCc-cchHHHHHHHHhCCCEEEEecc
Q 044519 253 QEV-GSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT-VEDMDLAVRASLKGWKFVFVGD 310 (534)
Q Consensus 253 ~~~-~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~-~ED~~l~~rl~~~G~ki~~~~~ 310 (534)
..- ........-.+....+||++.+.....++.+.. .|-.-.-.++.++|+++..++.
T Consensus 208 ~kd~~~~~~~i~~~n~Giy~f~~~~L~~l~~l~~~n~e~e~yLtdl~~le~G~~i~~~~~ 267 (293)
T PLN02917 208 NKSGKVNPQFPYLLHLGIQSYDAKFLKIYPELPPTPLQLEEDLEQLKVLENGYKMKVIKV 267 (293)
T ss_pred CCCcccccccceEEEEEEEEeCHHHHHHHHcCCCCcccchhccHHHHHHhCCCceEEEEe
Confidence 110 000111122356678999999998776766544 2222222257799999877653
No 103
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=93.44 E-value=0.64 Score=42.07 Aligned_cols=93 Identities=24% Similarity=0.245 Sum_probs=57.8
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
+....++.+++.+.+.. .+++.| |.++. +.... +... ...+.++..+....|-..++..
T Consensus 24 ~g~~li~~~i~~l~~~~--~~~i~v-v~~~~-~~~~~------------~~~~-----~~~~~~~~~~~~~~G~~~~i~~ 82 (186)
T cd04182 24 DGKPLLRHALDAALAAG--LSRVIV-VLGAE-ADAVR------------AALA-----GLPVVVVINPDWEEGMSSSLAA 82 (186)
T ss_pred CCeeHHHHHHHHHHhCC--CCcEEE-ECCCc-HHHHH------------HHhc-----CCCeEEEeCCChhhCHHHHHHH
Confidence 44578899999887752 234433 43332 22111 1111 2234444333333457788899
Q ss_pred HHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHh
Q 044519 181 GLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLL 215 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 215 (534)
|++.+. .+.|+++++++|. .++++.++++++.+.
T Consensus 83 al~~~~-~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 117 (186)
T cd04182 83 GLEALP-ADADAVLILLADQPLVTAETLRALIDAFR 117 (186)
T ss_pred HHHhcc-ccCCEEEEEeCCCCCCCHHHHHHHHHHHH
Confidence 998761 1379999999998 569999999998874
No 104
>TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase.
Probab=93.11 E-value=4.3 Score=38.75 Aligned_cols=187 Identities=21% Similarity=0.168 Sum_probs=91.2
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|. +....+..+++.+.+.. -++++| +.|+ +... +.++++ +.++. .......||..
T Consensus 19 ~~l-~GkPli~~~le~~~~~~--~d~VvV-vt~~---~~i~------------~~~~~~---g~~~v-~~~~~~~~Gt~- 74 (238)
T TIGR00466 19 EDI-FGKPMIVHVAENANESG--ADRCIV-ATDD---ESVA------------QTCQKF---GIEVC-MTSKHHNSGTE- 74 (238)
T ss_pred ccc-CCcCHHHHHHHHHHhCC--CCeEEE-EeCH---HHHH------------HHHHHc---CCEEE-EeCCCCCChhH-
Confidence 444 34567888999887643 344433 4442 2122 222221 33322 22223344433
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC----CchhhHhHh-hhcccchh
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLENKELGLVQARWKFVNAD----ECLMTRLQE-MSLDYHFS 250 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~----~~~~~~~~~-~~~~~~~~ 250 (534)
....+++.....+.|+++++|+|.= ++|+.+.++++.+ .+++.+++.......+.. .+-...... -.....+.
T Consensus 75 r~~~~~~~l~~~~~d~Vli~~gD~Pli~~~~I~~li~~~-~~~~~~~a~~~~~~~d~~~~~~p~~vk~v~~~~g~alyfs 153 (238)
T TIGR00466 75 RLAEVVEKLALKDDERIVNLQGDEPFIPKEIIRQVADNL-ATKNVPMAALAVKIHDAEEAFNPNAVKVVLDSQGYALYFS 153 (238)
T ss_pred HHHHHHHHhCCCCCCEEEEEcCCcCcCCHHHHHHHHHHH-hcCCCCEEEEeeecCCHHHccCCCceEEEeCCCCeEEEec
Confidence 2333433221125689999999965 5999999999988 343344333332222200 000000000 00000000
Q ss_pred hhh--hccccc------Cc-cccccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEec
Q 044519 251 VEQ--EVGSST------CQ-FFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFVG 309 (534)
Q Consensus 251 ~~~--~~~~~~------~~-~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~ 309 (534)
... ..+... .. ....+=+-.+||++++++.-.++...+ .|+.| .+|+..+|+++....
T Consensus 154 r~~ip~~R~~~~~~~tpq~~~~~~h~Giy~~~~~~L~~~~~~~~~~le~~e~le-qlr~le~g~~i~~~~ 222 (238)
T TIGR00466 154 RSLIPFDRDFFAKRQTPVGDNLLRHIGIYGYRAGFIEEYVAWKPCVLEEIEKLE-QLRVLYYGEKIHVKI 222 (238)
T ss_pred CCCCCCCCCcccccccccccceeEEEEEEeCCHHHHHHHHhCCCCcccccchhH-HHhhhhcCCceEEEE
Confidence 000 000000 00 001122356899999999877776544 67777 468889999997755
No 105
>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.
Probab=92.88 E-value=0.2 Score=48.12 Aligned_cols=103 Identities=19% Similarity=0.159 Sum_probs=59.0
Q ss_pred EEEEec-cCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCC
Q 044519 94 LVQIPM-YNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNG 172 (534)
Q Consensus 94 sViIP~-yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g 172 (534)
||+|-+ |+..+.+.+.|+++.+..+-+ +++| |=.+ ..+... . .++...+..++++..+ ++
T Consensus 2 Tvvi~t~~~R~~~L~~~l~~l~~~~~l~-~IvV-vWn~-~~~~P~---------~-----~~~~~~~vpV~~~~~~-~n- 62 (247)
T PF09258_consen 2 TVVINTSYKRSDLLKRLLRHLASSPSLR-KIVV-VWNN-PNPPPP---------S-----SKWPSTGVPVRVVRSS-RN- 62 (247)
T ss_dssp EEEEEE-SS-HHHHHHHHHHHTTSTTEE-EEEE-EEE--TS--TH---------H-----HHHT---S-EEEEEES-SH-
T ss_pred EEEEEecccchHHHHHHHHHHHcCCCCC-eEEE-EeCC-CCCCCc---------c-----cccCCCCceEEEEecC-Cc-
Confidence 788888 999999999999996665432 2222 3243 222111 1 2233445777777432 21
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCc
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKE 219 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~ 219 (534)
.-.++-.-.... +.|-|+.+|+|..++++.|+.......++|+
T Consensus 63 -sLnnRF~p~~~i---~T~AVl~~DDDv~~~~~~l~faF~~W~~~pd 105 (247)
T PF09258_consen 63 -SLNNRFLPDPEI---ETDAVLSLDDDVMLSCDELEFAFQVWREFPD 105 (247)
T ss_dssp -HGGGGGS--TT-----SSEEEEEETTEEE-HHHHHHHHHHHCCSTT
T ss_pred -cHHhcCcCcccc---CcceEEEecCCcccCHHHHHHHHHHHHhChh
Confidence 111222222344 8999999999999999999999888877775
No 106
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=92.54 E-value=1 Score=40.92 Aligned_cols=99 Identities=19% Similarity=0.215 Sum_probs=60.3
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|. +....+..+++++.+.. .++++| |+++..++ ..+..++ ..++.++.......|-..
T Consensus 20 l~~-~g~pll~~~i~~l~~~~--~~~iiv-v~~~~~~~------------~~~~~~~-----~~~v~~v~~~~~~~g~~~ 78 (188)
T TIGR03310 20 LPY-KGKTILEHVVDNALRLF--FDEVIL-VLGHEADE------------LVALLAN-----HSNITLVHNPQYAEGQSS 78 (188)
T ss_pred ccc-CCeeHHHHHHHHHHHcC--CCcEEE-EeCCcHHH------------HHHHhcc-----CCCeEEEECcChhcCHHH
Confidence 344 44678888998887654 234433 44443221 2212211 234555544333334667
Q ss_pred HHHHHHH-hhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCc
Q 044519 177 ALKEGLE-KQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKE 219 (534)
Q Consensus 177 aln~gl~-~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~ 219 (534)
++..|++ .. +.|.++++++|. .++++.++++++.+..+++
T Consensus 79 si~~~l~~~~---~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~ 120 (188)
T TIGR03310 79 SIKLGLELPV---QSDGYLFLLGDQPFVTPDIIQLLLEAFALKND 120 (188)
T ss_pred HHHHHhcCCC---CCCEEEEEeCCcCCCCHHHHHHHHHHHHhCCC
Confidence 7788877 33 678999999997 5699999999987744444
No 107
>KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones]
Probab=91.99 E-value=0.22 Score=49.66 Aligned_cols=109 Identities=18% Similarity=0.106 Sum_probs=70.9
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEE-cCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVL-DDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~-Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
|.|-|.+-.+|-...+.--+..+-++|||+.+.-|++- |-+.|.+++ ..++..+........|.+....+
T Consensus 3 ptvl~alL~rn~ah~lp~Flg~le~~Dypk~r~aiw~~~dh~~d~~ie---------~freWL~nv~~~y~~V~~e~~~e 73 (568)
T KOG4179|consen 3 PTVLCALLFRNFAHSLPLFLGELEEGDYPKIRPAIWIGVDHEHDHAIE---------YFREWLENVGDLYHRVKWEPFIE 73 (568)
T ss_pred ceeehHHHHHHHHhhhhhccCChhccCCcccccceEEecCccccchHH---------HHHHHHHhcCCccceeEEEecCC
Confidence 55666666777777777777777889999988777665 558888887 66555555433444555543221
Q ss_pred C------CCC--------------ChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHH
Q 044519 170 R------NGY--------------KAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIP 212 (534)
Q Consensus 170 ~------~g~--------------Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~ 212 (534)
+ .|. |-.|+|.|=+ .-.||+++.|.|+.+ .+|.|.-+++
T Consensus 74 ~~s~~d~~~pk~W~~sr~q~lm~lKeea~~~~r~----~~adyilf~d~d~lLts~dTl~llm~ 133 (568)
T KOG4179|consen 74 PKSYPDEHGPKHWPDSRFQHLMSLKEEALNWARS----GWADYILFKDEDNLLTSGDTLPLLMN 133 (568)
T ss_pred ccccCcccCCccCchHHHHHHHHHHHHHHHHHHh----hhcceeEEeehhheeeCCchHhHHHh
Confidence 1 121 2333444332 367999999999988 7887776654
No 108
>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane]
Probab=91.78 E-value=11 Score=35.12 Aligned_cols=146 Identities=16% Similarity=0.118 Sum_probs=80.6
Q ss_pred CccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchh
Q 044519 159 GVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLM 237 (534)
Q Consensus 159 ~~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~ 237 (534)
|..+..- +.+...|- .-+..+++.....+.|+|+-+-.|. ..+|.-+.++++.+ ++.++++++......+..+-+-
T Consensus 63 G~~avmT-~~~h~SGT-dR~~Ev~~~l~~~~~~iIVNvQGDeP~i~p~~I~~~~~~L-~~~~~~~aTl~~~i~~~ee~~n 139 (247)
T COG1212 63 GGEAVMT-SKDHQSGT-DRLAEVVEKLGLPDDEIIVNVQGDEPFIEPEVIRAVAENL-ENSNADMATLAVKITDEEEAFN 139 (247)
T ss_pred CCEEEec-CCCCCCcc-HHHHHHHHhcCCCcceEEEEccCCCCCCCHHHHHHHHHHH-HhCCcceeeeeeecCCHHHhcC
Confidence 4444333 44333333 3355555554345778999999994 44999999999999 4558888877766544322110
Q ss_pred hHhH----h-hhcccchhhhhh--cccccCccccc--cCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEE
Q 044519 238 TRLQ----E-MSLDYHFSVEQE--VGSSTCQFFGF--NGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFV 306 (534)
Q Consensus 238 ~~~~----~-~~~~~~~~~~~~--~~~~~~~~~~~--~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~ 306 (534)
...- . -.+...|...-. .+.. .+...+ .=.-..||+.++++...|.+..+ .|+.| -.|+..+|.|+.
T Consensus 140 PN~VKvV~d~~g~ALYFSRs~iP~~rd~-~~~~p~l~HIGIYayr~~~L~~f~~~~ps~LE~~E~LE-QLR~Le~G~kI~ 217 (247)
T COG1212 140 PNVVKVVLDKEGYALYFSRAPIPYGRDN-FGGTPFLRHIGIYAYRAGFLERFVALKPSPLEKIESLE-QLRVLENGEKIH 217 (247)
T ss_pred CCcEEEEEcCCCcEEEEEcCCCCCcccc-cCCcchhheeehHHhHHHHHHHHHhcCCchhHHHHHHH-HHHHHHcCCeeE
Confidence 0000 0 001111111000 0000 000111 12246799999999988987554 45555 467778999986
Q ss_pred Eec
Q 044519 307 FVG 309 (534)
Q Consensus 307 ~~~ 309 (534)
..-
T Consensus 218 v~i 220 (247)
T COG1212 218 VEI 220 (247)
T ss_pred EEE
Confidence 653
No 109
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=91.62 E-value=0.31 Score=47.03 Aligned_cols=109 Identities=14% Similarity=0.067 Sum_probs=56.8
Q ss_pred cCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccC
Q 044519 188 KDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNG 267 (534)
Q Consensus 188 ~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 267 (534)
.+.+|.++.|+|+.+..+-|.+++..+ ||+-...-|.......... ..+.... .....+..+.-.|
T Consensus 85 ~~~~Wf~~~DDDtyv~~~~L~~~L~~~--~~~~~~yiG~~~~~~~~~~-~~~~~~~-----------~~~~~~~~f~~GG 150 (252)
T PF02434_consen 85 SDKDWFCFADDDTYVNVENLRRLLSKY--DPSEPIYIGRPSGDRPIEI-IHRFNPN-----------KSKDSGFWFATGG 150 (252)
T ss_dssp HT-SEEEEEETTEEE-HHHHHHHHTTS---TTS--EEE-EE----------------------------------EE-GG
T ss_pred CCceEEEEEeCCceecHHHHHHHHhhC--CCccCEEeeeeccCcccee-ecccccc-----------ccCcCceEeeCCC
Confidence 377999999999999999999999987 4444444444332211110 0000000 0011122233468
Q ss_pred CcchhhHHHHHHhC------CCCC----CCccchHHHHHHHHh-CCCEEEEecc
Q 044519 268 TAGVWRIQAIEDAG------GWKD----RTTVEDMDLAVRASL-KGWKFVFVGD 310 (534)
Q Consensus 268 ~~~~~Rr~~l~~~G------g~~~----~~~~ED~~l~~rl~~-~G~ki~~~~~ 310 (534)
++.+++|.+++++. .+.. ....||+.+++-+.. .|.+....+.
T Consensus 151 aG~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci~~~lgv~lt~s~~ 204 (252)
T PF02434_consen 151 AGYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCIENLLGVPLTHSPL 204 (252)
T ss_dssp G-EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHHHHTT---EEE-TT
T ss_pred eeHHHhHHHHHHHhhhcccccccCCcCCCCCcccChhhhhHHhcCCcceeechh
Confidence 99999999999872 2222 134799999999988 9998877765
No 110
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=90.92 E-value=4.8 Score=38.35 Aligned_cols=121 Identities=14% Similarity=0.116 Sum_probs=71.5
Q ss_pred EEEEeccCchHHHHHHHH-HHHcC--CCCCCceEEEEE-cCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 94 LVQIPMYNEKEVYKLSIG-AACGL--SWPSDRLIVQVL-DDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 94 sViIP~yne~~~l~~~L~-sl~~q--~yp~~~~~I~V~-Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
-|..-.||.++.+..... ++++. ...++.+-|-|. .||+|.|.+ .++.+...+...+.+-.+...+.
T Consensus 3 fIA~~l~~~~~iL~~~~~~~ll~li~~LGp~nv~vSIyE~~S~D~T~~---------~L~~L~~~L~~lgv~~~i~~~~~ 73 (241)
T PF11735_consen 3 FIAANLYNNEDILPSLWGDALLELIRFLGPENVFVSIYESGSWDGTKE---------ALRALDAELDALGVPHSIVLSDI 73 (241)
T ss_pred EEEEEcccCHhHHHHHHHHHHHHHHHHhCcCeEEEEEEeCCCCccHHH---------HHHHHHHHHHhCCCCeEEEeCCC
Confidence 344456777777776655 55441 222344544444 568898887 77766666656666655543221
Q ss_pred CCC-------------CChhHHHHHHHhhh------ccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEee
Q 044519 170 RNG-------------YKAGALKEGLEKQY------VKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQA 225 (534)
Q Consensus 170 ~~g-------------~Ka~aln~gl~~a~------~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~ 225 (534)
... .-|.-+|.+++-.. ..+.|-|++++ |....++-+.+++..- +..+.+++++
T Consensus 74 ~~~~~~~~~~~~~RI~~LA~lRN~ALePL~~~~~~~~~~fd~VlfLN-DV~f~~~Dil~LL~~~-~~~~~~~aCa 146 (241)
T PF11735_consen 74 THRDEIERPPRLRRIEYLAELRNRALEPLYDLARKRGRRFDKVLFLN-DVFFCPEDILELLFTR-NRGNYDMACA 146 (241)
T ss_pred cccccccccchhhhHHHHHHHHhHHHHHHHhhhhccCCCcCEEEEec-CcccCHHHHHHHHhhc-Ccccccchhh
Confidence 111 12455677776432 13567899999 8788777777776664 2245566655
No 111
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=89.74 E-value=4.6 Score=37.90 Aligned_cols=96 Identities=21% Similarity=0.213 Sum_probs=60.7
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|.-+ ...+..+++++.+.. -.++.| |+... ++... +... ..++.++.++.. .|.++
T Consensus 21 ~~v~g-kpli~~~i~~l~~~~--i~~i~i-v~~~~-~~~i~------------~~~~-----~~~~~~~~~~~~-~g~~~ 77 (229)
T cd02540 21 HPLAG-KPMLEHVLDAARALG--PDRIVV-VVGHG-AEQVK------------KALA-----NPNVEFVLQEEQ-LGTGH 77 (229)
T ss_pred ceeCC-ccHHHHHHHHHHhCC--CCeEEE-EECCC-HHHHH------------HHhC-----CCCcEEEECCCC-CCCHH
Confidence 45545 478899999998754 234444 33221 22222 2222 134555544433 45889
Q ss_pred HHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhc
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLE 216 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~ 216 (534)
++..|++.. ..+.|.++++++|. ..+++.+.++++.+.+
T Consensus 78 ai~~a~~~~-~~~~~~vli~~~D~p~~~~~~i~~l~~~~~~ 117 (229)
T cd02540 78 AVKQALPAL-KDFEGDVLVLYGDVPLITPETLQRLLEAHRE 117 (229)
T ss_pred HHHHHHHhh-ccCCCeEEEEeCCccccCHHHHHHHHHHHHh
Confidence 999998875 11268999999998 5688999999887744
No 112
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=89.43 E-value=5.2 Score=37.38 Aligned_cols=103 Identities=17% Similarity=0.048 Sum_probs=59.3
Q ss_pred CcEEEEEeccCchH---HHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 91 PMVLVQIPMYNEKE---VYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 91 P~VsViIP~yne~~---~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
|.|-++-|+|.... .+.+.-..+.-- |+ +.=+|++|+...+.. +.+..++ -|..-+++..
T Consensus 1 p~i~vVTPTy~R~~Q~~~LtRLa~TL~lV--p~--l~WIVVEd~~~~t~~----------va~lL~~---sgl~y~HL~~ 63 (223)
T cd00218 1 PTIYVVTPTYARPVQKAELTRLAHTLRLV--PP--LHWIVVEDSEEKTPL----------VAELLRR---SGLMYTHLNA 63 (223)
T ss_pred CeEEEECCCCccchhhHHHHHHHHHHhcC--Cc--eEEEEEeCCCCCCHH----------HHHHHHH---cCCceEEecc
Confidence 57889999999873 444444444433 33 444466665433322 2222222 2454455433
Q ss_pred cCC---CCC---ChhHHHHHHHhhhcc----CCcEEEEecCCCCCCHHHHHHH
Q 044519 168 KNR---NGY---KAGALKEGLEKQYVK----DCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 168 ~~~---~g~---Ka~aln~gl~~a~~~----~~d~v~~lDaD~~~~pd~L~~l 210 (534)
+.+ +.. -...+|.|+++.... ..-+|.|.|+|...+-+..+++
T Consensus 64 ~~~~~~~~~~~rg~~qRn~AL~~ir~~~~~~~~GVVyFADDdN~Ysl~lF~em 116 (223)
T cd00218 64 KTPSDPTWLKPRGVEQRNLALRWIREHLSAKLDGVVYFADDDNTYDLELFEEM 116 (223)
T ss_pred CCCCCcccCCcccHHHHHHHHHHHHhccccCcceEEEEccCCCcccHHHHHHH
Confidence 222 111 245789999886332 3468889999999998887774
No 113
>PF04666 Glyco_transf_54: N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region; InterPro: IPR006759 The complex-type of oligosaccharides are synthesised through elongation by glycosyltransferases after trimming of the precursor oligosaccharides transferred to proteins in the endoplasmic reticulum. N-Acetylglucosaminyltransferases (GnTs) take part in the formation of branches in the biosynthesis of complex-type sugar chains. In vertebrates, six GnTs, designated as GnT-I to -VI, which catalyse the transfer of GlcNAc to the core mannose residues of Asn-linked sugar chains, have been identified. GnT-IV (2.4.1.145 from EC) catalyzes the transfer of GlcNAc from UDP-GlcNAc to the GlcNAc1-2Man1-3 arm of core oligosaccharide [Gn2(22)core oligosaccharide] and forms a GlcNAc1-4(GlcNAc1-2)Man1-3 structure on the core oligosaccharide (Gn3(2,4,2)core oligosaccharide). In some members the conserved region occupies all but the very N-terminal, where there is a signal sequence on all members. For other members the conserved region does not occupy the entire protein but is still to the N-terminal end of the protein [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane
Probab=89.16 E-value=5.9 Score=39.03 Aligned_cols=122 Identities=11% Similarity=0.058 Sum_probs=66.6
Q ss_pred CCCcEEEEEeccCch--HHHHHHHHHHHcCCCCCC--ceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEE
Q 044519 89 SYPMVLVQIPMYNEK--EVYKLSIGAACGLSWPSD--RLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKY 164 (534)
Q Consensus 89 ~~P~VsViIP~yne~--~~l~~~L~sl~~q~yp~~--~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~ 164 (534)
.-++++|=||+-..+ ..+.+||.|++..--|.+ .+.|+|.=..+|++.... ..+++...+..+... | .+.+
T Consensus 50 ~~~~L~IGIpTV~R~~~sYL~~TL~SLl~~ls~~Er~~i~IvVllAd~Dp~~~~~---~~~~i~~~f~~~i~s-G-~l~V 124 (297)
T PF04666_consen 50 TGKKLCIGIPTVKREKESYLLDTLASLLDGLSPEERKDIVIVVLLADTDPDYHPS---VAQNISTRFADHIES-G-LLEV 124 (297)
T ss_pred CCCeEEEEecccccCCCchHHHHHHHHHHhCCHHHhcCeEEEEEecCCChhhhHH---HHHHHHHHhHHHHHh-C-ceEE
Confidence 345699999997765 789999999988666654 344434433334433210 001122222222211 1 2333
Q ss_pred EEecCC----------CCCC---------hhHHH--HHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhc
Q 044519 165 ETRKNR----------NGYK---------AGALK--EGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLE 216 (534)
Q Consensus 165 ~~r~~~----------~g~K---------a~aln--~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~ 216 (534)
++.+.. +.+- ..++. ..++.+ ...++|.+.+.+|.+..|+|+.++.....+
T Consensus 125 I~~p~~~Yp~l~~l~~~~~d~~~rv~wrsKq~lDya~Lm~y~-~~~~~YyL~LEDDVia~~~f~~~i~~~v~~ 196 (297)
T PF04666_consen 125 ISPPPSYYPDLDNLKRNFGDSEERVRWRSKQNLDYAFLMNYC-QNLGDYYLQLEDDVIAAPGFLSRIKRFVEA 196 (297)
T ss_pred EecccccCCChhhhhhcccChhhhhhHHHhhcccHHHHHHHH-HhcCCeEEEecCCeEechhHHHHHHHHHHH
Confidence 322110 0000 00111 222222 247899999999999999999999888743
No 114
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=89.02 E-value=3.1 Score=37.52 Aligned_cols=50 Identities=12% Similarity=0.153 Sum_probs=38.8
Q ss_pred EEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHH
Q 044519 162 VKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYL 214 (534)
Q Consensus 162 v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~ 214 (534)
+.++..+....|...++..|+++. +.|.++++++|.- ++++.+++++..+
T Consensus 59 ~~~v~~~~~~~G~~~si~~~l~~~---~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 59 VPVIPDEPPGKGPLAGILAALRAA---PADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CcEeeCCCCCCCCHHHHHHHHHhc---CCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 344433333445788999999987 7899999999984 5999999998877
No 115
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=87.67 E-value=4.9 Score=36.75 Aligned_cols=41 Identities=15% Similarity=0.130 Sum_probs=34.2
Q ss_pred CCChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHh
Q 044519 172 GYKAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLL 215 (534)
Q Consensus 172 g~Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 215 (534)
.|-..++..|++.. +.|+++++++|. .++++.+.++++.+.
T Consensus 74 ~g~~~~i~~~l~~~---~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 115 (193)
T PRK00317 74 PGPLAGILAGLKQA---RTEWVLVVPCDTPFIPPDLVARLAQAAG 115 (193)
T ss_pred CCCHHHHHHHHHhc---CCCeEEEEcCCcCCCCHHHHHHHHHhhh
Confidence 34667888888876 789999999997 669999999998773
No 116
>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB. In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental.
Probab=87.43 E-value=8.8 Score=34.96 Aligned_cols=46 Identities=26% Similarity=0.178 Sum_probs=35.0
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCC
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYLLENK 218 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~ 218 (534)
|...++..|++++...+.|+++++++|.-. +++.+.+++..+.+.+
T Consensus 79 G~~~si~~gl~~~~~~~~d~vlv~~~D~P~v~~~~i~~L~~~~~~~~ 125 (190)
T TIGR03202 79 GQAHSLKCGLRKAEAMGADAVVILLADQPFLTADVINALLALAKRRP 125 (190)
T ss_pred hHHHHHHHHHHHhccCCCCeEEEEeCCCCCCCHHHHHHHHHHHhhCC
Confidence 466788888887522357999999999554 9999999998874333
No 117
>PLN03153 hypothetical protein; Provisional
Probab=86.98 E-value=3.2 Score=43.51 Aligned_cols=99 Identities=15% Similarity=0.071 Sum_probs=62.0
Q ss_pred cCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccC
Q 044519 188 KDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNG 267 (534)
Q Consensus 188 ~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 267 (534)
.+.++++++|+|+.+.++-|.+.+..+ +..+--.++......+.+ .. .+..+.++|
T Consensus 209 pd~kWfVf~DDDTyf~~~NLv~~Ls~Y-Dptkp~YIGs~Se~~~qn-------------~~----------f~~~fA~GG 264 (537)
T PLN03153 209 PDVRWFVLGDDDTIFNADNLVAVLSKY-DPSEMVYVGGPSESHSAN-------------SY----------FSHNMAFGG 264 (537)
T ss_pred CCCCEEEEecCCccccHHHHHHHHhhc-CCCCCEEecccccccccc-------------cc----------cccccccCC
Confidence 578999999999999888888888776 222222333222111100 00 011234579
Q ss_pred CcchhhHHHHHHhCC--------CCCCCccchHHHHHHHHhCCCEEEEeccC
Q 044519 268 TAGVWRIQAIEDAGG--------WKDRTTVEDMDLAVRASLKGWKFVFVGDL 311 (534)
Q Consensus 268 ~~~~~Rr~~l~~~Gg--------~~~~~~~ED~~l~~rl~~~G~ki~~~~~~ 311 (534)
++.++.+.+++.+.. ++ ...++|..++.-+.+.|-+....+.-
T Consensus 265 AG~~LSrPLae~L~~~~d~C~~rY~-~~~~gD~rL~~CL~elGV~LT~~~gf 315 (537)
T PLN03153 265 GGIAISYPLAEALSRILDDCLDRYP-KLYGSDDRLHACITELGVPLSREPGF 315 (537)
T ss_pred ceEEEcHHHHHHHHHHhhhhhhhcc-cCCCcHHHHHHHHHHcCCCceecCCc
Confidence 999999966555322 22 23578999999999999777666653
No 118
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=85.69 E-value=4 Score=35.92 Aligned_cols=102 Identities=15% Similarity=0.196 Sum_probs=64.0
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|. ++...++.+++.+.+... ++++| +..+ ++ .. +.+ . ..++.++..+....|-..
T Consensus 19 ~~i-~g~~li~~~l~~l~~~~~--~~Ivv-v~~~--~~-~~--------~~~----~-----~~~~~~v~~~~~~~G~~~ 74 (160)
T PF12804_consen 19 LPI-GGKPLIERVLEALREAGV--DDIVV-VTGE--EE-IY--------EYL----E-----RYGIKVVVDPEPGQGPLA 74 (160)
T ss_dssp SEE-TTEEHHHHHHHHHHHHTE--SEEEE-EEST--HH-HH--------HHH----T-----TTTSEEEE-STSSCSHHH
T ss_pred eeE-CCccHHHHHHHHhhccCC--ceEEE-ecCh--HH-HH--------HHH----h-----ccCceEEEeccccCChHH
Confidence 455 666788899988877642 33332 3333 22 22 111 1 234666644444566888
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcCC-cEEEEe
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLENK-ELGLVQ 224 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~-~v~~V~ 224 (534)
++..|++.. .+.+.++++.+|.. ++++.+.+++..+.+++ ++.++.
T Consensus 75 sl~~a~~~~--~~~~~vlv~~~D~p~~~~~~l~~l~~~~~~~~~~i~~~~ 122 (160)
T PF12804_consen 75 SLLAALSQL--PSSEPVLVLPCDQPFLSPELLRRLLEALEKSPADIVVPV 122 (160)
T ss_dssp HHHHHHHTS--TTSSEEEEEETTETTS-HHHHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHhc--ccCCCcEEEeCCccccCHHHHHHHHHHHhccCCcEEEEE
Confidence 888888864 37899999999984 59999999999985433 444333
No 119
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=85.14 E-value=8.7 Score=35.54 Aligned_cols=96 Identities=17% Similarity=0.199 Sum_probs=57.5
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|..| ...+..+++++.+... .++.| +++...+ ... +...+....+.++.++..+.. .|-++
T Consensus 24 l~v~g-~pli~~~l~~l~~~g~--~~i~v-v~~~~~~-~i~------------~~~~~~~~~~~~i~~~~~~~~-~g~~~ 85 (217)
T cd04181 24 LPIAG-KPILEYIIERLARAGI--DEIIL-VVGYLGE-QIE------------EYFGDGSKFGVNIEYVVQEEP-LGTAG 85 (217)
T ss_pred cEECC-eeHHHHHHHHHHHCCC--CEEEE-EeccCHH-HHH------------HHHcChhhcCceEEEEeCCCC-CccHH
Confidence 44444 4789999999988652 34433 4443322 222 222211112345656543333 45788
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
++..+.+.. +.+.++++++|.+.+.+. .+++...
T Consensus 86 al~~~~~~~---~~~~~lv~~~D~~~~~~~-~~~~~~~ 119 (217)
T cd04181 86 AVRNAEDFL---GDDDFLVVNGDVLTDLDL-SELLRFH 119 (217)
T ss_pred HHHHhhhhc---CCCCEEEEECCeecCcCH-HHHHHHH
Confidence 999988876 688999999999888774 4444544
No 120
>PLN03180 reversibly glycosylated polypeptide; Provisional
Probab=85.00 E-value=2.1 Score=42.16 Aligned_cols=35 Identities=20% Similarity=0.154 Sum_probs=27.3
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHH-------HHHHHHHHH
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDED-------FLWRTIPYL 214 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd-------~L~~lv~~~ 214 (534)
.+|.|+-.+ +.+|++.+|+|+.|..| ++.+-+..+
T Consensus 84 ~R~fGyL~s---~~~yivsiDDD~~Pa~d~~g~~i~~~~qH~~NL 125 (346)
T PLN03180 84 CRCFGYLVS---KKKYIFTIDDDCFVAKDPSGKLINALEQHIKNL 125 (346)
T ss_pred chhhhheee---cceEEEEECCCCCCCCCCccccccHHHHHHHhc
Confidence 468888777 89999999999999776 666554433
No 121
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=84.84 E-value=8.2 Score=36.08 Aligned_cols=97 Identities=11% Similarity=0.113 Sum_probs=57.3
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
.+|.-+. ..+...++++.+.... ++ + |+-+...+... +...+ ...+.++.+.......-|-+
T Consensus 24 llpi~g~-~li~~~l~~l~~~gi~--~i-~-iv~~~~~~~i~------------~~~~~-~~~~~~i~~~~~~~~~~g~~ 85 (221)
T cd06422 24 LVPVAGK-PLIDHALDRLAAAGIR--RI-V-VNTHHLADQIE------------AHLGD-SRFGLRITISDEPDELLETG 85 (221)
T ss_pred eeeECCE-EHHHHHHHHHHHCCCC--EE-E-EEccCCHHHHH------------HHHhc-ccCCceEEEecCCCcccccH
Confidence 4566565 8999999999887543 23 3 33332222222 22221 11244555543221233478
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHH
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPY 213 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~ 213 (534)
+++..+.+.. +.|.++++++|.+.+.|....+..+
T Consensus 86 ~~l~~~~~~~---~~~~~lv~~~D~i~~~~~~~~~~~~ 120 (221)
T cd06422 86 GGIKKALPLL---GDEPFLVVNGDILWDGDLAPLLLLH 120 (221)
T ss_pred HHHHHHHHhc---CCCCEEEEeCCeeeCCCHHHHHHHH
Confidence 8899998876 4588999999999988765544333
No 122
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=84.71 E-value=7 Score=43.49 Aligned_cols=180 Identities=14% Similarity=0.152 Sum_probs=99.0
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHH--HHHHHHHHhc-----------------CCcEEEEeeeeEeecC
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDF--LWRTIPYLLE-----------------NKELGLVQARWKFVNA 232 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~--L~~lv~~~~~-----------------~~~v~~V~~~~~~~n~ 232 (534)
||..|-|.++--. +||++-.+|+.- -.-.++ ++.++..|++ .+.+.+++.+-.....
T Consensus 275 GK~eNQNhaiiF~---rGe~lQ~IDmNQDnYleE~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~~~~aIlG~RE~IFs~ 351 (817)
T PF02364_consen 275 GKPENQNHAIIFT---RGEYLQTIDMNQDNYLEEALKMRNLLEEFEEMHGDSSSPYIPGIEEEGKRPVAILGFREHIFSE 351 (817)
T ss_pred CCccccceeEEEE---ccccccccccchhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCceEecccceEecC
Confidence 7999999999887 999999999872 112222 2345666643 1345666665544443
Q ss_pred CCchhhH---hHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCC----CCccchHHHHHHHHhCCCEE
Q 044519 233 DECLMTR---LQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD----RTTVEDMDLAVRASLKGWKF 305 (534)
Q Consensus 233 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~----~~~~ED~~l~~rl~~~G~ki 305 (534)
+.+-+.. .|+..+. ...|+.-...+.- .-=|.-=++.|-....-||.+. -++.||..-++....+|.++
T Consensus 352 ~vg~L~~~aa~qE~~F~---Tl~qR~la~p~~r-lHYGHPD~~n~~f~~TRGGvSKAsk~lhLsEDIfaG~n~~lRGG~i 427 (817)
T PF02364_consen 352 NVGSLGDFAAGQEQSFG---TLFQRTLANPLVR-LHYGHPDVFNRIFMTTRGGVSKASKGLHLSEDIFAGMNATLRGGRI 427 (817)
T ss_pred CcchHHHHhhhhhHHHH---HHHHHHHhcchhh-ccCCCchhhhhhheeccCccchHhhcccccHHHHHHHHHHhcCCce
Confidence 3332222 2221111 1111111011100 0014444555555555566654 35799999999999999999
Q ss_pred EEeccCcccccCCcCHHHHHHHHhhhccchh-hHHhhhhhhhh-hcCCCChhHHHHHHH
Q 044519 306 VFVGDLGVKNELPSTFKAYRYQQHRWSCGPS-NLFSKMTREII-LCERVSVWKRLYLIY 362 (534)
Q Consensus 306 ~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~ 362 (534)
.++.-..|-----..+.+...=...-+.|+- |.+.+ ... ...++++.+.+.+.+
T Consensus 428 ~h~ey~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSR---e~yrLg~~ld~~R~LSfyy 483 (817)
T PF02364_consen 428 KHCEYIQCGKGRDVGFNSILNFETKIASGMGEQMLSR---EYYRLGTRLDFFRFLSFYY 483 (817)
T ss_pred eehhhhhcccccccCchhhhhhHhHhcCCccchhhhH---HHHHhhccCCHHHHHHHHh
Confidence 9988766522222344444444455567776 44332 222 235677777776543
No 123
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=84.70 E-value=8.5 Score=34.81 Aligned_cols=41 Identities=20% Similarity=0.144 Sum_probs=35.5
Q ss_pred CCChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHh
Q 044519 172 GYKAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLL 215 (534)
Q Consensus 172 g~Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 215 (534)
.|-.+++..|+++. +.|.++++++|. .++++.+++++..+.
T Consensus 73 ~g~~~si~~al~~~---~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 114 (186)
T TIGR02665 73 PGPLAGILAGLRWA---GTDWVLTVPCDTPFLPEDLVARLAAALE 114 (186)
T ss_pred CCCHHHHHHHHHhc---CCCeEEEEecCCCcCCHHHHHHHHHHhh
Confidence 45788899999887 789999999997 679999999999874
No 124
>KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones]
Probab=83.67 E-value=14 Score=36.09 Aligned_cols=101 Identities=21% Similarity=0.172 Sum_probs=62.2
Q ss_pred CCcEEEEEeccCchH---HHHHHHHHHHcCCCCCCceEEEEE-cC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEE
Q 044519 90 YPMVLVQIPMYNEKE---VYKLSIGAACGLSWPSDRLIVQVL-DD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKY 164 (534)
Q Consensus 90 ~P~VsViIP~yne~~---~l~~~L~sl~~q~yp~~~~~I~V~-Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~ 164 (534)
.|.|-|+-|+|+... .+.+.-..+. + -|+ +.=+|+ |+ +..+.+. .+++ ..|..-+|
T Consensus 86 ~~~iivVTPTY~R~~q~~~LtRlanTL~-~-V~n--LhWIVVEd~~~~~p~v~--------~~L~-------rtgl~yth 146 (330)
T KOG1476|consen 86 LPTIIVVTPTYVRPVQAAELTRLANTLR-L-VPN--LHWIVVEDGEGTTPEVS--------GILR-------RTGLPYTH 146 (330)
T ss_pred CccEEEEcccccchhHHHHHHHHHHHHh-h-cCC--eeEEEEecCCCCCHHHH--------HHHH-------HcCCceEE
Confidence 688999999999973 3333333332 2 233 333345 44 3333333 2333 23666667
Q ss_pred EEecCCCCCC----hhHHHHHHHhhh-----c-cCCcEEEEecCCCCCCHHHHHH
Q 044519 165 ETRKNRNGYK----AGALKEGLEKQY-----V-KDCQFVVIFDADFQPDEDFLWR 209 (534)
Q Consensus 165 ~~r~~~~g~K----a~aln~gl~~a~-----~-~~~d~v~~lDaD~~~~pd~L~~ 209 (534)
+..+.+.++| -..+|.|++... . +..-+|.|-|+|...+-+...+
T Consensus 147 l~~~t~~~~~~~rg~~qRn~aL~~ir~~~~~~~~~~GVVyFADDdN~YdleLF~e 201 (330)
T KOG1476|consen 147 LVHKTPMGYKARRGWEQRNMALRWIRSRILRHHKLEGVVYFADDDNTYDLELFEE 201 (330)
T ss_pred EeccCCCCCccccchhHHHHHHHHHHHhcccccccceEEEEccCCcchhHHHHHH
Confidence 7666666767 458899998763 1 2345778889999988887777
No 125
>KOG3917 consensus Beta-1,4-galactosyltransferase B4GALT7/SQV-3 [Carbohydrate transport and metabolism]
Probab=83.34 E-value=3.2 Score=38.18 Aligned_cols=151 Identities=14% Similarity=0.218 Sum_probs=88.2
Q ss_pred cCCCCcEEEEEeccCchHHHHHHHHHHH----cCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccE
Q 044519 87 NKSYPMVLVQIPMYNEKEVYKLSIGAAC----GLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNV 162 (534)
Q Consensus 87 ~~~~P~VsViIP~yne~~~l~~~L~sl~----~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v 162 (534)
+..+.+.+|++|-++.-+.+.+-+..+. +|.-. -.|+|.+.- |+ .
T Consensus 70 ~aS~HklavlVPfRdRfEELl~FvPHM~~FL~rq~v~---HHI~vlNQv-D~---------------------------f 118 (310)
T KOG3917|consen 70 GASYHKLAVLVPFRDRFEELLEFVPHMSKFLHRQNVS---HHILVLNQV-DP---------------------------F 118 (310)
T ss_pred CccceeEEEEechHHHHHHHHHhhHHHHHHHhhcCcc---eEEEEeecc-Cc---------------------------c
Confidence 3567889999998877666655554442 34432 345455431 11 0
Q ss_pred EEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHh
Q 044519 163 KYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQE 242 (534)
Q Consensus 163 ~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~ 242 (534)
++ ..|.-+|.|+..| ...+||+++-|.|-.|-.+-|.. .-|+. .|+.....+.-
T Consensus 119 RF--------NRAsLINVGf~ea-s~~~DYiaMhDVDLLPlN~el~Y------~fP~~---~gp~HiasP~l-------- 172 (310)
T KOG3917|consen 119 RF--------NRASLINVGFNEA-SRLCDYIAMHDVDLLPLNPELPY------DFPGI---GGPRHIASPQL-------- 172 (310)
T ss_pred ee--------chhhheecchhhh-cchhceeeecccccccCCCCCCC------CCCcc---CCcccccCccc--------
Confidence 00 1444567777776 34589999999998773321110 11221 12211111110
Q ss_pred hhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEe
Q 044519 243 MSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFV 308 (534)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~ 308 (534)
......-.+.|.-.+.+++.++...|.+.... -||-|+-.|+..+|....-.
T Consensus 173 --------------HPkYHY~~fvGGILll~~~hyk~~NGMSN~yWGWGlEDDEFy~RI~dagLqltRp 227 (310)
T KOG3917|consen 173 --------------HPKYHYEKFVGGILLLTLKHYKKLNGMSNKYWGWGLEDDEFYLRIIDAGLQLTRP 227 (310)
T ss_pred --------------CchhhhhhhcceeEEeeHHHHHHhcCccccccccCcccchhhheeccccceEecc
Confidence 00111122468889999999999999887544 58999999999999876443
No 126
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=82.69 E-value=7.2 Score=36.03 Aligned_cols=52 Identities=15% Similarity=0.198 Sum_probs=39.8
Q ss_pred cEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHHHh
Q 044519 161 NVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYLL 215 (534)
Q Consensus 161 ~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~ 215 (534)
++.++.......|-..++..|++.. +.|+++++++|.-. +++.++++++...
T Consensus 67 ~~~~i~~~~~~~G~~~si~~~l~~~---~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 119 (200)
T PRK02726 67 GCHWLREPPPSQGPLVAFAQGLPQI---KTEWVLLLACDLPRLTVDVLQEWLQQLE 119 (200)
T ss_pred CCeEecCCCCCCChHHHHHHHHHhC---CCCcEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 3555544444445678899999987 67999999999654 9999999998873
No 127
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=82.43 E-value=15 Score=33.98 Aligned_cols=96 Identities=16% Similarity=0.151 Sum_probs=55.6
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|.-|. ..+...++.+.+..- +++.| +.+. .++... +...+....+.++.+. ++....|.++
T Consensus 24 l~i~g~-pli~~~l~~l~~~g~--~~v~v-v~~~-~~~~i~------------~~~~~~~~~~~~~~~~-~~~~~~G~~~ 85 (223)
T cd06915 24 APVAGR-PFLEYLLEYLARQGI--SRIVL-SVGY-LAEQIE------------EYFGDGYRGGIRIYYV-IEPEPLGTGG 85 (223)
T ss_pred cEECCc-chHHHHHHHHHHCCC--CEEEE-Eccc-CHHHHH------------HHHcCccccCceEEEE-ECCCCCcchH
Confidence 444454 678999999887542 23333 4433 222222 1211100012334444 3333445788
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
++..+++.. +.|.++++++|...+++ +.+++..+
T Consensus 86 ~l~~a~~~~---~~~~~lv~~~D~~~~~~-~~~~l~~~ 119 (223)
T cd06915 86 AIKNALPKL---PEDQFLVLNGDTYFDVD-LLALLAAL 119 (223)
T ss_pred HHHHHHhhc---CCCCEEEEECCcccCCC-HHHHHHHH
Confidence 888888876 67889999999977665 56677766
No 128
>cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule. GT2_BcbE_like: The bcbE gene is one of the genes in the capsule biosynthetic locus of Pasteurella multocida. Its deducted product is likely involved in the biosynthesis of the polysaccharide capsule, which is found on surface of a wide range of bacteria. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=81.80 E-value=13 Score=34.90 Aligned_cols=99 Identities=11% Similarity=0.061 Sum_probs=54.3
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|..+. ..++.+|+++.++. ..+++| |. +....... .+++..+.. ..++.+...++...|-+
T Consensus 23 ll~i~g~-pli~~~l~~l~~~g--~~~ivv-v~-~~~~~~~~---------~~~~~~~~~---~~~~~i~~~~~~~~g~~ 85 (231)
T cd04183 23 LIEVDGK-PMIEWVIESLAKIF--DSRFIF-IC-RDEHNTKF---------HLDESLKLL---APNATVVELDGETLGAA 85 (231)
T ss_pred eeEECCE-EHHHHHHHhhhccC--CceEEE-EE-ChHHhhhh---------hHHHHHHHh---CCCCEEEEeCCCCCcHH
Confidence 3566665 78999999998765 233333 44 21111111 222211111 12333332333344577
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHH
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPY 213 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~ 213 (534)
+++..+.... ...+.++++++|.+.+.+....+..+
T Consensus 86 ~~l~~a~~~l--~~~~~~lv~~~D~i~~~~~~~~~~~~ 121 (231)
T cd04183 86 CTVLLAADLI--DNDDPLLIFNCDQIVESDLLAFLAAF 121 (231)
T ss_pred HHHHHHHhhc--CCCCCEEEEecceeeccCHHHHHHHh
Confidence 8888887764 22477889999999888866544433
No 129
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry.; InterPro: IPR005835 Nucleotidyl transferases transfer nucleotides from one compound to another. This domain is found in a number of enzymes that transfer nucleotides onto phosphosugars.; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1YP2_C 1YP4_D 1YP3_B 1H5S_D 1H5R_C 1H5T_C 2E3D_B 1JYL_C 1JYK_A 1MP5_C ....
Probab=81.66 E-value=7 Score=37.18 Aligned_cols=100 Identities=18% Similarity=0.224 Sum_probs=63.2
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|..|....+...|+.+.+... .++++ |+-+...+ .+++..++....+.++.++..+... |-++
T Consensus 25 l~i~g~~pli~~~l~~l~~~g~--~~ii~-V~~~~~~~------------~i~~~~~~~~~~~~~i~~i~~~~~~-Gta~ 88 (248)
T PF00483_consen 25 LPIGGKYPLIDYVLENLANAGI--KEIIV-VVNGYKEE------------QIEEHLGSGYKFGVKIEYIVQPEPL-GTAG 88 (248)
T ss_dssp SEETTEEEHHHHHHHHHHHTTC--SEEEE-EEETTTHH------------HHHHHHTTSGGGTEEEEEEEESSSS-CHHH
T ss_pred ceecCCCcchhhhhhhhcccCC--ceEEE-EEeecccc------------cccccccccccccccceeeeccccc-chhH
Confidence 6777876789999999988553 23333 44433222 2223333322234567777555444 5899
Q ss_pred HHHHHHHhhhccCCc----EEEEecCCCCCCHHHHHHHHHHHhc
Q 044519 177 ALKEGLEKQYVKDCQ----FVVIFDADFQPDEDFLWRTIPYLLE 216 (534)
Q Consensus 177 aln~gl~~a~~~~~d----~v~~lDaD~~~~pd~L~~lv~~~~~ 216 (534)
|+..+.... +.+ .++++.+|.+.+. .+..+++...+
T Consensus 89 al~~a~~~i---~~~~~~~~~lv~~gD~i~~~-~~~~~l~~~~~ 128 (248)
T PF00483_consen 89 ALLQALDFI---EEEDDDEDFLVLNGDIIFDD-DLQDMLEFHRE 128 (248)
T ss_dssp HHHHTHHHH---TTSEE-SEEEEETTEEEEST-THHHHHHHHHH
T ss_pred HHHHHHHHh---hhccccceEEEEeccccccc-hhhhHHHhhhc
Confidence 999998887 444 5999999998887 44556655533
No 130
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.
Probab=81.50 E-value=27 Score=32.42 Aligned_cols=103 Identities=19% Similarity=0.164 Sum_probs=58.7
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|. +....++.+++++.+.... +++.| |.++......+ .. .+. .....+.+. .. .. +..
T Consensus 22 l~~i-~Gkpll~~~i~~l~~~~~~-~~ivV-v~~~~~~~~~~------------~~-~~~-~~~~~~~~~-~~-~~-~~~ 81 (218)
T cd02516 22 FLEL-GGKPVLEHTLEAFLAHPAI-DEIVV-VVPPDDIDLAK------------EL-AKY-GLSKVVKIV-EG-GA-TRQ 81 (218)
T ss_pred eeEE-CCeEHHHHHHHHHhcCCCC-CEEEE-EeChhHHHHHH------------HH-Hhc-ccCCCeEEE-CC-ch-HHH
Confidence 3444 4557899999999875432 33333 44432211111 11 111 011233333 21 12 256
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcCC
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLENK 218 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~ 218 (534)
.++..|+++....+.|.++++++|.- ++++.++++++.+.+++
T Consensus 82 ~si~~al~~~~~~~~~~vlv~~~D~P~i~~~~i~~li~~~~~~~ 125 (218)
T cd02516 82 DSVLNGLKALPDADPDIVLIHDAARPFVSPELIDRLIDALKEYG 125 (218)
T ss_pred HHHHHHHHhcccCCCCEEEEccCcCCCCCHHHHHHHHHHHhhCC
Confidence 77888888641125789999999965 59999999999884443
No 131
>PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional
Probab=81.39 E-value=18 Score=34.18 Aligned_cols=99 Identities=10% Similarity=0.116 Sum_probs=56.3
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
++...+..+++++.+.... +++.| |+++... . .+++.++++.....++.++ ....+ ...++..
T Consensus 28 ~gkpll~~~i~~~~~~~~~-~~ivV-v~~~~~~---~---------~~~~~~~~~~~~~~~~~~v--~~g~~-r~~sv~~ 90 (230)
T PRK13385 28 VGEPIFIHALRPFLADNRC-SKIII-VTQAQER---K---------HVQDLMKQLNVADQRVEVV--KGGTE-RQESVAA 90 (230)
T ss_pred CCeEHHHHHHHHHHcCCCC-CEEEE-EeChhhH---H---------HHHHHHHhcCcCCCceEEc--CCCch-HHHHHHH
Confidence 4567889999988764322 33333 5544221 1 2222222221111123333 11122 3477788
Q ss_pred HHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCC
Q 044519 181 GLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYLLENK 218 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~ 218 (534)
|++.. .+.+.++++|+|.=. +++.+.+++..+.+++
T Consensus 91 gl~~~--~~~d~vli~~~d~P~i~~~~i~~li~~~~~~~ 127 (230)
T PRK13385 91 GLDRI--GNEDVILVHDGARPFLTQDIIDRLLEGVAKYG 127 (230)
T ss_pred HHHhc--cCCCeEEEccCCCCCCCHHHHHHHHHHHhhCC
Confidence 88764 246889999999544 9999999999884433
No 132
>PF14097 SpoVAE: Stage V sporulation protein AE1
Probab=81.33 E-value=23 Score=31.35 Aligned_cols=91 Identities=16% Similarity=0.194 Sum_probs=55.6
Q ss_pred EEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe--cCCCCCChhHHHHHHHhhhccCCc-EEEEecCCCC
Q 044519 125 VQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR--KNRNGYKAGALKEGLEKQYVKDCQ-FVVIFDADFQ 201 (534)
Q Consensus 125 I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r--~~~~g~Ka~aln~gl~~a~~~~~d-~v~~lDaD~~ 201 (534)
|+|-|+ |...+ +.+|..+++ ...+.++. .+++.-...-+-..++.| .+| .++++|+--.
T Consensus 3 IlvTDG--D~~A~--------ravE~aa~~-----iGgRCIS~S~GNPT~lsG~elV~lIk~a---~~DPV~VMfDD~G~ 64 (180)
T PF14097_consen 3 ILVTDG--DEYAK--------RAVEIAAKN-----IGGRCISQSAGNPTPLSGEELVELIKQA---PHDPVLVMFDDKGF 64 (180)
T ss_pred EEEECC--hHHHH--------HHHHHHHHH-----hCcEEEeccCCCCCcCCHHHHHHHHHhC---CCCCEEEEEeCCCC
Confidence 446677 55544 455544443 34445543 344433445677777777 555 5666677666
Q ss_pred CCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC
Q 044519 202 PDEDFLWRTIPYLLENKELGLVQARWKFVNAD 233 (534)
Q Consensus 202 ~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~ 233 (534)
.....=++.+.+...+|++.+.+.--...|..
T Consensus 65 ~g~G~GE~Al~~v~~h~~IeVLG~iAVASnT~ 96 (180)
T PF14097_consen 65 IGEGPGEQALEYVANHPDIEVLGAIAVASNTH 96 (180)
T ss_pred CCCCccHHHHHHHHcCCCceEEEEEEEEecCC
Confidence 66666677778887889887776665555544
No 133
>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane]
Probab=81.30 E-value=4.3 Score=38.07 Aligned_cols=98 Identities=16% Similarity=0.094 Sum_probs=60.8
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCC-CCChhHHHH
Q 044519 102 EKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRN-GYKAGALKE 180 (534)
Q Consensus 102 e~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~-g~Ka~aln~ 180 (534)
..+.+.++|+++.+..- .++ ++|+.+-.. ++++++..++ +.+.+++..+... ++-...+-.
T Consensus 30 gr~ii~~~i~~L~~~gi--~e~-vvV~~g~~~------------~lve~~l~~~---~~~~~iv~N~~y~ktN~~~Sl~~ 91 (239)
T COG1213 30 GREIIYRTIENLAKAGI--TEF-VVVTNGYRA------------DLVEEFLKKY---PFNAKIVINSDYEKTNTGYSLLL 91 (239)
T ss_pred CeEeHHHHHHHHHHcCC--ceE-EEEeccchH------------HHHHHHHhcC---CcceEEEeCCCcccCCceeEEee
Confidence 34678999999988653 233 336656333 3555555554 3355555433222 112335666
Q ss_pred HHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEE
Q 044519 181 GLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLV 223 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V 223 (534)
|.+.. +++ ++++|+|++.+|++++++++.= .+..++.
T Consensus 92 akd~~---~~~-fii~~sD~vye~~~~e~l~~a~--~~~li~d 128 (239)
T COG1213 92 AKDYM---DGR-FILVMSDHVYEPSILERLLEAP--GEGLIVD 128 (239)
T ss_pred ehhhh---cCc-EEEEeCCEeecHHHHHHHHhCc--CCcEEEe
Confidence 77776 666 8899999999999999998852 3444443
No 134
>cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase. This family is the long form of Glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.The long from enzymes also have a left-handed parallel helix domain at the c-terminus, whereas, th eshort form enzymes do not have this domain. The homotetrameric, feedback inhibited short form is found in
Probab=80.79 E-value=20 Score=33.69 Aligned_cols=97 Identities=14% Similarity=0.072 Sum_probs=53.7
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|.-+. ..+..+++++.+... .++.| |+.. ..+... +...+....+.++.++..+ ...|-+
T Consensus 25 l~~i~g~-~li~~~l~~l~~~~~--~~i~v-v~~~-~~~~~~------------~~~~~~~~~~~~i~~~~~~-~~~g~~ 86 (236)
T cd04189 25 LIPVAGK-PIIQYAIEDLREAGI--EDIGI-VVGP-TGEEIK------------EALGDGSRFGVRITYILQE-EPLGLA 86 (236)
T ss_pred eeEECCc-chHHHHHHHHHHCCC--CEEEE-EcCC-CHHHHH------------HHhcchhhcCCeEEEEECC-CCCChH
Confidence 4565554 788999999987542 33333 4433 222222 2222211123455555333 223478
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
+++..|.+.. +.+-++++.+|.+.+++... ++..+
T Consensus 87 ~sl~~a~~~i---~~~~~li~~~D~~~~~~~~~-~~~~~ 121 (236)
T cd04189 87 HAVLAARDFL---GDEPFVVYLGDNLIQEGISP-LVRDF 121 (236)
T ss_pred HHHHHHHHhc---CCCCEEEEECCeecCcCHHH-HHHHH
Confidence 8888888765 33335558899988877554 55444
No 135
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=80.66 E-value=29 Score=33.93 Aligned_cols=117 Identities=16% Similarity=0.211 Sum_probs=59.3
Q ss_pred cEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEE-cCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec--
Q 044519 92 MVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVL-DDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK-- 168 (534)
Q Consensus 92 ~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~-Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~-- 168 (534)
.++|+....|-.+.+..++.|++.-. +..+.+.|. |+.+++..+ .+.+. +...+..+.....+
T Consensus 2 ~~~iv~~~~~y~~~~~~~i~Sil~n~--~~~~~fhii~d~~s~~~~~---------~l~~~---~~~~~~~i~f~~i~~~ 67 (280)
T cd06431 2 HVAIVCAGYNASRDVVTLVKSVLFYR--RNPLHFHLITDEIARRILA---------TLFQT---WMVPAVEVSFYNAEEL 67 (280)
T ss_pred EEEEEEccCCcHHHHHHHHHHHHHcC--CCCEEEEEEECCcCHHHHH---------HHHHh---ccccCcEEEEEEhHHh
Confidence 46777777554588899999998743 233555555 444444333 22222 11224455555332
Q ss_pred -CC-----CCCChhH---HHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHH---HhcCCcEEEEe
Q 044519 169 -NR-----NGYKAGA---LKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPY---LLENKELGLVQ 224 (534)
Q Consensus 169 -~~-----~g~Ka~a---ln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~---~~~~~~v~~V~ 224 (534)
+. +...+.. ....+......+.|-++.+|+|.++..| +.++... + .+..+.++.
T Consensus 68 ~~~~~~~~~~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~d-i~eL~~~~~~~-~~~~~~a~v 133 (280)
T cd06431 68 KSRVSWIPNKHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATD-IAELWKIFHKF-TGQQVLGLV 133 (280)
T ss_pred hhhhccCcccchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCC-HHHHHHHhhhc-CCCcEEEEe
Confidence 11 1111111 1112222222368999999999888444 3444443 3 333455543
No 136
>PLN02458 transferase, transferring glycosyl groups
Probab=80.34 E-value=29 Score=34.28 Aligned_cols=104 Identities=13% Similarity=0.092 Sum_probs=58.3
Q ss_pred CCCcEEEEEeccC-ch---HHHHHHHHHHHcCCCCCCceEEEEEcCCC-hhhhchhhhhhhHHHHHHHHHHHhhcCccEE
Q 044519 89 SYPMVLVQIPMYN-EK---EVYKLSIGAACGLSWPSDRLIVQVLDDST-NEVLRTDFFQYTQKLVELECLKWIEKGVNVK 163 (534)
Q Consensus 89 ~~P~VsViIP~yn-e~---~~l~~~L~sl~~q~yp~~~~~I~V~Dds~-D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~ 163 (534)
..+.|-||-|+|. .. ..+.+.-..+.--.+| -.. ||++|+. -+++. ++++ + -|..-+
T Consensus 110 ~~rlIivVTPTY~rR~~Q~a~LTRLahTL~lVp~p-L~W--IVVEd~~~t~~va--------~lLr----r---sGl~y~ 171 (346)
T PLN02458 110 PRRLVIIVTPISTKDRYQGVLLRRLANTLRLVPPP-LLW--IVVEGQSDSEEVS--------EMLR----K---TGIMYR 171 (346)
T ss_pred CCceEEEECCCCCCcchhHHHHHHHHHHHhcCCCC-ceE--EEEeCCCCCHHHH--------HHHH----H---cCCceE
Confidence 3456888999998 33 3455555555444333 333 3454433 22222 2333 2 245444
Q ss_pred EEEecCC----CCCChhHHHHHHHhhhc-cCCcEEEEecCCCCCCHHHHHHH
Q 044519 164 YETRKNR----NGYKAGALKEGLEKQYV-KDCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 164 ~~~r~~~----~g~Ka~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~~l 210 (534)
++..+++ .+.....+|.|+++... ...-+|.|.|+|...+-+..+++
T Consensus 172 HL~~k~~~~~~~~r~~~QRN~AL~~IR~h~l~GVVyFADDdNtYsl~LFeEm 223 (346)
T PLN02458 172 HLVFKENFTDPEAELDHQRNLALRHIEHHKLSGIVHFAGLSNVYDLDFFDEI 223 (346)
T ss_pred EeccCCCCCCccchhHHHHHHHHHHHHhcCcCceEEEccCCCcccHHHHHHH
Confidence 4432211 12235668999998733 23458888999999988877764
No 137
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=79.34 E-value=23 Score=37.25 Aligned_cols=103 Identities=17% Similarity=0.122 Sum_probs=59.5
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|.-| ...++.+++.+.+... +++.| ++.. .++... +...++ +.++.+...+. ..|-+
T Consensus 27 ll~v~g-kpli~~~l~~l~~~gi--~~ivv-v~~~-~~~~i~------------~~~~~~---~~~~~~~~~~~-~~G~~ 85 (446)
T PRK14353 27 LHPVAG-RPMLAHVLAAAASLGP--SRVAV-VVGP-GAEAVA------------AAAAKI---APDAEIFVQKE-RLGTA 85 (446)
T ss_pred cCEECC-chHHHHHHHHHHhCCC--CcEEE-EECC-CHHHHH------------HHhhcc---CCCceEEEcCC-CCCcH
Confidence 355555 4789999999987653 34444 4432 222222 222221 22333333333 33467
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCcE
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKEL 220 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~v 220 (534)
+++..+.+.. ....|.++++++|. ..+++.++++++....+.+.
T Consensus 86 ~sl~~a~~~l-~~~~~~~lv~~~D~P~i~~~~l~~l~~~~~~~~~~ 130 (446)
T PRK14353 86 HAVLAAREAL-AGGYGDVLVLYGDTPLITAETLARLRERLADGADV 130 (446)
T ss_pred HHHHHHHHHH-hccCCCEEEEeCCcccCCHHHHHHHHHhHhcCCcE
Confidence 7888777764 11257788899998 77999999999866333333
No 138
>cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety. CMP-N-acetylneuraminic acid synthetase (CMP-NeuAc synthetase) or acylneuraminate cytidylyltransferase catalyzes the transfer the CMP moiety of CTP to the anomeric hydroxyl group of NeuAc in the presence of Mg++. It is the second to last step in the sialylation of the oligosaccharide component of glycoconjugates by providing the activated sugar-nucleotide cytidine 5'-monophosphate N-acetylneuraminic acid (CMP-Neu5Ac), the substrate for sialyltransferases. Eukaryotic CMP-NeuAc synthetases are predominantly located in the nucleus. The activated CMP-Neu5Ac diffuses from the nucleus into the cytoplasm.
Probab=79.14 E-value=30 Score=32.10 Aligned_cols=44 Identities=16% Similarity=0.211 Sum_probs=32.5
Q ss_pred CChhHHHHHHHhhhc--cCCcEEEEecCCCC-CCHHHHHHHHHHHhc
Q 044519 173 YKAGALKEGLEKQYV--KDCQFVVIFDADFQ-PDEDFLWRTIPYLLE 216 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~--~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~ 216 (534)
+...++..+++.... .+.|.++++++|.- .+++.+.+++..+.+
T Consensus 79 ~~~~~i~~~l~~l~~~~~~~d~vlv~~~D~P~i~~~~i~~~i~~~~~ 125 (223)
T cd02513 79 SSIDVILHALDQLEELGRDFDIVVLLQPTSPLRSAEDIDEAIELLLS 125 (223)
T ss_pred CcHHHHHHHHHHHHHhCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHh
Confidence 456677778875411 12589999999975 499999999998844
No 139
>PF05045 RgpF: Rhamnan synthesis protein F; InterPro: IPR007739 This family consists of a group of proteins which are related to the Streptococcal rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O-polysaccharides found in phytopathogenic bacteria and are regarded as pathogenic factors [].
Probab=78.82 E-value=50 Score=35.33 Aligned_cols=123 Identities=14% Similarity=0.192 Sum_probs=70.3
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
..++|.|++=+|-.+ .+++.++.+.+...+ ..++|.-++.+. .+ .+++..++.+. -.++++...+
T Consensus 263 ~~~kiav~lHv~Y~D-Ll~E~l~~l~~~p~~---~Dl~ITt~~~~~-~~---------~i~~~l~~~~~-~~~~~v~vv~ 327 (498)
T PF05045_consen 263 SKKKIAVHLHVFYPD-LLEEILDYLANIPFP---YDLFITTDSEEK-KE---------EIEEILAKRPG-FKNAEVRVVE 327 (498)
T ss_pred CCCcEEEEEEEEcHh-hHHHHHHHHHhCCCC---eEEEEECCchhh-HH---------HHHHHHHhccC-CCceEEEEeC
Confidence 456899999888764 567777777776543 344444333222 11 33344333211 1244444333
Q ss_pred CCCCCChhHHHHHHHhhh-ccCCcEEEEecCCCCC--------------------CHHHHHHHHHHHhcCCcEEEEeeee
Q 044519 169 NRNGYKAGALKEGLEKQY-VKDCQFVVIFDADFQP--------------------DEDFLWRTIPYLLENKELGLVQARW 227 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~-~~~~d~v~~lDaD~~~--------------------~pd~L~~lv~~~~~~~~v~~V~~~~ 227 (534)
+.|-=.+++-.+++... ..++|+|+.+..---+ +++...+.+..|++||++|+|.+..
T Consensus 328 -NrGRDi~pfLv~~~~~l~~~~YD~v~~~HtKKS~~~~~~~g~~wr~~l~~~LL~s~~~v~~Il~~F~~~p~lGlv~P~~ 406 (498)
T PF05045_consen 328 -NRGRDILPFLVGLKDELLDSKYDYVCHLHTKKSPHNDRSDGDSWRRELLDNLLGSKEYVDNILSAFEDDPRLGLVIPDI 406 (498)
T ss_pred -CCCccHHHHHHHHHHHhccCCccEEEEEEcccCcCcCcchHHHHHHHHHHHhcCCHHHHHHHHHHHhhCCCceEEeCCc
Confidence 33334445443343321 2489999998654322 2355667788888899999998875
No 140
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.
Probab=77.13 E-value=25 Score=36.93 Aligned_cols=103 Identities=17% Similarity=0.140 Sum_probs=62.1
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|.-++ ..+..+++++.+... ++++| ++.. .++..+ +...+ .++.+...+.. .|-+
T Consensus 22 l~~i~gk-pli~~~l~~l~~~g~--~~iii-v~~~-~~~~i~------------~~~~~-----~~i~~~~~~~~-~G~~ 78 (451)
T TIGR01173 22 LHPLAGK-PMLEHVIDAARALGP--QKIHV-VYGH-GAEQVR------------KALAN-----RDVNWVLQAEQ-LGTG 78 (451)
T ss_pred hceeCCc-cHHHHHHHHHHhCCC--CeEEE-EECC-CHHHHH------------HHhcC-----CCcEEEEcCCC-CchH
Confidence 3555554 788899999987653 23433 3332 222222 22222 23555533333 4577
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCcEEEEe
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKELGLVQ 224 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~v~~V~ 224 (534)
+++..+++.. .+.|.++++++|. ..+++.++++++.+.+ .+..++.
T Consensus 79 ~ai~~a~~~l--~~~~~~lv~~~D~p~i~~~~~~~l~~~~~~-~~~~~~~ 125 (451)
T TIGR01173 79 HAVLQALPFL--PDDGDVLVLYGDVPLISAETLERLLEAHRQ-NGITLLT 125 (451)
T ss_pred HHHHHHHHhc--CCCCcEEEEECCcCCcCHHHHHHHHHHHhh-CCEEEEE
Confidence 8888888765 2347899999998 5789999999987743 3444443
No 141
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=75.85 E-value=41 Score=33.60 Aligned_cols=54 Identities=11% Similarity=0.205 Sum_probs=39.8
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHh---cCCcEEEEeeeeEee
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLL---ENKELGLVQARWKFV 230 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~---~~~~v~~V~~~~~~~ 230 (534)
-..-+|.|.+.+ +.++++++|.|.+|.++.-+.+.+... .+.....|-......
T Consensus 115 iN~LRNvAr~~a---~T~~v~~~DvD~~ps~~l~~~l~~~~~~~~~~~~~a~VvPaFE~~ 171 (317)
T PF13896_consen 115 INLLRNVARSGA---RTDYVFLLDVDFLPSPGLYEKLLRFARRNIDKSKTAFVVPAFETR 171 (317)
T ss_pred hHHHHHHHHHhc---CcceEEEecceeeeCcchHHHHHHHhhhhccCCceEEEEeeeecc
Confidence 445679999998 999999999999999887777665542 234566666655543
No 142
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=75.65 E-value=59 Score=32.16 Aligned_cols=120 Identities=13% Similarity=0.046 Sum_probs=55.1
Q ss_pred EEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhh-cCccEEEEEecCCC
Q 044519 93 VLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIE-KGVNVKYETRKNRN 171 (534)
Q Consensus 93 VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~-~~~~v~~~~r~~~~ 171 (534)
++|+..-.+ .+.+..+|.|++.-+.-+.++.| +.|+..++..+ +.+++....+.. -+..+.-+.-+...
T Consensus 3 ~~vv~~g~~-~~~~~~~lkSil~~n~~~l~Fhi-~~d~~~~~~~~--------~~l~~~~~~~~~~i~~~i~~I~~P~~~ 72 (304)
T cd06430 3 LAVVACGER-LEETLTMLKSAIVFSQKPLRFHI-FAEDQLKQSFK--------EKLDDWPELIDRKFNYTLHPITFPSGN 72 (304)
T ss_pred EEEEEcCCc-HHHHHHHHHHHHHhCCCCEEEEE-EECCccCHHHH--------HHHHHHHHhccceeeeEEEEEecCccc
Confidence 555555555 47778889998665533334444 44553333333 244443222100 01133333222111
Q ss_pred --C----CChhHHH-HHHHhhhccCCcEEEEecCCCCCCH--HHHHHHHHHHhcCCcEEEEe
Q 044519 172 --G----YKAGALK-EGLEKQYVKDCQFVVIFDADFQPDE--DFLWRTIPYLLENKELGLVQ 224 (534)
Q Consensus 172 --g----~Ka~aln-~gl~~a~~~~~d~v~~lDaD~~~~p--d~L~~lv~~~~~~~~v~~V~ 224 (534)
+ .|..+-- ..+... ..+-|-++.+|+|.+... +-|-.+...| ++..++++.
T Consensus 73 ~~~ws~l~~~~~y~RL~ip~l-Lp~~dkvLYLD~Dii~~~dI~eL~~~~~df-~~~~~aA~v 132 (304)
T cd06430 73 AAEWKKLFKPCAAQRLFLPSL-LPDVDSLLYVDTDILFLRPVEEIWSFLKKF-NSTQLAAMA 132 (304)
T ss_pred hhhhhhcccHHHHHHHHHHHH-hhhhceEEEeccceeecCCHHHHHHHHhhc-CCCeEEEEE
Confidence 0 1111111 112221 235689999999988843 3333333344 344455554
No 143
>PF03213 Pox_P35: Poxvirus P35 protein; InterPro: IPR004900 The Poxvirus P35 protein is an immunodominant envelope protein. It binds to heparan sulphate on the cell surface to provide virion attachment to target cell [].; GO: 0019031 viral envelope
Probab=75.24 E-value=25 Score=34.41 Aligned_cols=44 Identities=20% Similarity=0.350 Sum_probs=37.1
Q ss_pred cCCcEEEEecCCCCC-CHHHHHHHHHHHhcCCcEEEEeeeeEeecC
Q 044519 188 KDCQFVVIFDADFQP-DEDFLWRTIPYLLENKELGLVQARWKFVNA 232 (534)
Q Consensus 188 ~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~ 232 (534)
...+|++++++|..+ ++..+..++..| .+.+++++|-+....+.
T Consensus 117 ~~~~yivVvEddnT~~~~~~l~~~I~aM-~~k~idilQLre~~~~~ 161 (325)
T PF03213_consen 117 PEDKYIVVVEDDNTLRDITTLHPIIKAM-KKKNIDILQLRETYHNS 161 (325)
T ss_pred CCCCeEEEEeCCCcccccHHHHHHHHHH-HHcCceEEEEehhhhcc
Confidence 467899999999555 899999999999 66799999998776654
No 144
>cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain and a C-terminal Lefthanded-beta-Helix fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repression of GDP-mannose pyrophosphorylase in yeast leads to phenotypes, such as cell lysis, defective cell wall, and failure of polarized growth and cell separation.
Probab=75.20 E-value=17 Score=34.26 Aligned_cols=100 Identities=12% Similarity=0.148 Sum_probs=55.7
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHh-hcCccEEEEEecCCCCCC
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWI-EKGVNVKYETRKNRNGYK 174 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~-~~~~~v~~~~r~~~~g~K 174 (534)
++|..+. ..+..+++++.++.. .++.| |+....+ ... +.+ +++. ..+.++.+... ....|-
T Consensus 25 llpv~g~-pli~~~l~~l~~~g~--~~v~i-v~~~~~~-~~~--------~~l----~~~~~~~~~~i~~~~~-~~~~G~ 86 (233)
T cd06425 25 LVEFCNK-PMIEHQIEALAKAGV--KEIIL-AVNYRPE-DMV--------PFL----KEYEKKLGIKITFSIE-TEPLGT 86 (233)
T ss_pred cCeECCc-chHHHHHHHHHHCCC--cEEEE-EeeeCHH-HHH--------HHH----hcccccCCeEEEeccC-CCCCcc
Confidence 3566555 789999999988753 23433 4433222 222 122 2221 12334444322 233457
Q ss_pred hhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHh
Q 044519 175 AGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLL 215 (534)
Q Consensus 175 a~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~ 215 (534)
++++..+.+.....+.+ ++++++|.+.+.+ +.+++....
T Consensus 87 ~~al~~a~~~~~~~~~~-~lv~~~D~~~~~~-~~~~~~~~~ 125 (233)
T cd06425 87 AGPLALARDLLGDDDEP-FFVLNSDVICDFP-LAELLDFHK 125 (233)
T ss_pred HHHHHHHHHHhccCCCC-EEEEeCCEeeCCC-HHHHHHHHH
Confidence 88888888875111234 6777999887766 467777653
No 145
>TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form. This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.
Probab=74.88 E-value=18 Score=35.60 Aligned_cols=99 Identities=11% Similarity=0.064 Sum_probs=56.3
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|+++. ..+...|+.+..... .++.| |......+..+ +...+...-+.++.+...+++. |-+
T Consensus 24 Llpv~gk-PmI~~~L~~l~~aGi--~~I~i-v~~~~~~~~~~------------~~lg~g~~~g~~i~~~~q~~~~-Gta 86 (286)
T TIGR01207 24 LLPIYDK-PMIYYPLSTLMLAGI--RDILI-ISTPQDTPRFQ------------QLLGDGSQWGVNLSYAVQPSPD-GLA 86 (286)
T ss_pred eeEECCE-EhHHHHHHHHHHCCC--CEEEE-EecCCcHHHHH------------HHhccccccCceEEEEEccCCC-CHH
Confidence 5888887 788888888887543 23333 33222111112 2222111225567777544444 588
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
+|+..+.+.. .+.+++++. +|....+.-+.++++..
T Consensus 87 ~al~~a~~~l--~~~~~~li~-gD~i~~~~~l~~ll~~~ 122 (286)
T TIGR01207 87 QAFIIGEDFI--GGDPSALVL-GDNIFYGHDLSDLLKRA 122 (286)
T ss_pred HHHHHHHHHh--CCCCEEEEE-CCEeccccCHHHHHHHH
Confidence 9998888875 234566555 66555445567776655
No 146
>cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase. This family is the short form of glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The homotetrameric, feedback inhibited short form is found in numerous bacterial species that produce dTDP-L-rhamnose. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.
Probab=74.68 E-value=77 Score=29.88 Aligned_cols=98 Identities=14% Similarity=0.089 Sum_probs=53.2
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|.- ....+..+|+++.+..- .++.| |+.....+ .+++...+...-+.++.+... +...|-++
T Consensus 26 lpv~-~~pli~~~l~~l~~~gi--~~i~v-v~~~~~~~------------~~~~~l~~~~~~~~~i~~~~~-~~~~G~~~ 88 (240)
T cd02538 26 LPVY-DKPMIYYPLSTLMLAGI--REILI-ISTPEDLP------------LFKELLGDGSDLGIRITYAVQ-PKPGGLAQ 88 (240)
T ss_pred eEEC-CEEhHHHHHHHHHHCCC--CEEEE-EeCcchHH------------HHHHHHhcccccCceEEEeeC-CCCCCHHH
Confidence 4554 35688899999887542 23333 44322111 111222211111345555533 33345788
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
++..+.+.. +.|-++++.+|....+..+.+++...
T Consensus 89 al~~a~~~~---~~~~~lv~~gD~~~~~~~~~~~~~~~ 123 (240)
T cd02538 89 AFIIGEEFI---GDDPVCLILGDNIFYGQGLSPILQRA 123 (240)
T ss_pred HHHHHHHhc---CCCCEEEEECCEEEccHHHHHHHHHH
Confidence 888888765 44556666888766555577777655
No 147
>PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional
Probab=74.31 E-value=49 Score=31.15 Aligned_cols=93 Identities=14% Similarity=0.069 Sum_probs=53.6
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
+....++.+++++.+...- ++++| +.++ +... +.++++ +.++.+. .+...+|.++ +..
T Consensus 25 ~GkPli~~~i~~l~~~~~~-~~ivv-~t~~---~~i~------------~~~~~~---~~~v~~~-~~~~~~g~~~-~~~ 82 (238)
T PRK13368 25 LGKPMIQHVYERAAQAAGV-EEVYV-ATDD---QRIE------------DAVEAF---GGKVVMT-SDDHLSGTDR-LAE 82 (238)
T ss_pred CCcCHHHHHHHHHHhcCCC-CeEEE-ECCh---HHHH------------HHHHHc---CCeEEec-CccCCCccHH-HHH
Confidence 3456788899988876322 23332 3332 2222 222222 3444332 2233344443 445
Q ss_pred HHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCC
Q 044519 181 GLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENK 218 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~ 218 (534)
+++.. +.|.++++++|. ...++.+.++++.+.+++
T Consensus 83 a~~~~---~~d~~lv~~~D~P~i~~~~i~~l~~~~~~~~ 118 (238)
T PRK13368 83 VMLKI---EADIYINVQGDEPMIRPRDIDTLIQPMLDDP 118 (238)
T ss_pred HHHhC---CCCEEEEEcCCcCcCCHHHHHHHHHHHHHCC
Confidence 56554 578999999998 679999999999884444
No 148
>PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional
Probab=74.29 E-value=79 Score=29.84 Aligned_cols=97 Identities=16% Similarity=0.090 Sum_probs=52.5
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|. +....++.+++.+.+.. -++++| +. +. +... +.+.+ .+..+.+. .+...+|.++
T Consensus 22 l~i-~Gkpll~~~l~~l~~~~--i~~ivv-v~-~~--~~i~------------~~~~~---~~~~v~~~-~~~~~~gt~~ 78 (245)
T PRK05450 22 ADI-GGKPMIVRVYERASKAG--ADRVVV-AT-DD--ERIA------------DAVEA---FGGEVVMT-SPDHPSGTDR 78 (245)
T ss_pred ccc-CCcCHHHHHHHHHHhcC--CCeEEE-EC-Cc--HHHH------------HHHHH---cCCEEEEC-CCcCCCchHH
Confidence 444 44578889999887752 233332 33 21 2122 22222 23344332 2222333433
Q ss_pred HHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcC
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLEN 217 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 217 (534)
+..+++.....+.|.++++++|. .++++.+.++++...++
T Consensus 79 -~~~~~~~~~~~~~~~vlv~~~D~Pli~~~~l~~li~~~~~~ 119 (245)
T PRK05450 79 -IAEAAAKLGLADDDIVVNVQGDEPLIPPEIIDQVAEPLANP 119 (245)
T ss_pred -HHHHHHhcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHhcC
Confidence 33344332112468899999998 77999999999887433
No 149
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=73.82 E-value=32 Score=33.46 Aligned_cols=22 Identities=32% Similarity=0.516 Sum_probs=17.6
Q ss_pred cCCcEEEEecCCCCC--CHHHHHH
Q 044519 188 KDCQFVVIFDADFQP--DEDFLWR 209 (534)
Q Consensus 188 ~~~d~v~~lDaD~~~--~pd~L~~ 209 (534)
++.|=|+++|||+++ +|+.|-+
T Consensus 89 ssFeevllLDaD~vpl~~p~~lF~ 112 (271)
T PF11051_consen 89 SSFEEVLLLDADNVPLVDPEKLFE 112 (271)
T ss_pred CCcceEEEEcCCcccccCHHHHhc
Confidence 489999999999998 6665443
No 150
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=73.41 E-value=39 Score=35.67 Aligned_cols=98 Identities=13% Similarity=0.085 Sum_probs=60.5
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|..+. ..++.+++++.+... .++.+ ++.... +... +... ++.++.+...+... |-+
T Consensus 25 l~pi~g~-pli~~~l~~l~~~gi--~~iii-v~~~~~-~~i~------------~~~~----~~~~i~~~~~~~~~-Gt~ 82 (459)
T PRK14355 25 MHPLAGR-PMVSWPVAAAREAGA--GRIVL-VVGHQA-EKVR------------EHFA----GDGDVSFALQEEQL-GTG 82 (459)
T ss_pred eceeCCc-cHHHHHHHHHHhcCC--CeEEE-EECCCH-HHHH------------HHhc----cCCceEEEecCCCC-CHH
Confidence 4666665 688889999887542 33433 444322 2122 1111 12356665443333 477
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhc
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLE 216 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~ 216 (534)
+++..+++.. ....|.++++++|. ..+++.+.++++.+..
T Consensus 83 ~al~~a~~~l-~~~~~~vlv~~gD~p~~~~~~i~~l~~~~~~ 123 (459)
T PRK14355 83 HAVACAAPAL-DGFSGTVLILCGDVPLLRAETLQGMLAAHRA 123 (459)
T ss_pred HHHHHHHHHh-hccCCcEEEEECCccCcCHHHHHHHHHHHHh
Confidence 8888888764 11257899999998 6789999999987743
No 151
>cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide. CMP-KDO Synthetase: 3-Deoxy-D-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) catalyzes the conversion of CTP and 3-deoxy-D-manno-octulosonate into CMP-3-deoxy-D-manno-octulosonate (CMP-KDO) and pyrophosphate. KDO is an essential component of the lipopolysaccharide found in the outer surface of gram-negative eubacteria. It is also a constituent of the capsular polysaccharides of some gram-negative eubacteria. Its presence in the cell wall polysaccharides of green algae and plant were also discovered. However, they have not been found in yeast and animals. The absence of the enzyme in mammalian cells makes it an attractive target molecule for drug design.
Probab=72.81 E-value=64 Score=30.36 Aligned_cols=101 Identities=16% Similarity=0.105 Sum_probs=54.9
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|. +....++.+++.+.+..-. ++++| +.++ + .+++.+.++ +.++.+. .+...+|.+
T Consensus 20 l~~i-~gkpll~~~l~~l~~~~~i-~~ivv-v~~~--~-------------~i~~~~~~~---~~~~~~~-~~~~~~gt~ 77 (239)
T cd02517 20 LADI-AGKPMIQHVYERAKKAKGL-DEVVV-ATDD--E-------------RIADAVESF---GGKVVMT-SPDHPSGTD 77 (239)
T ss_pred Cccc-CCcCHHHHHHHHHHhCCCC-CEEEE-ECCc--H-------------HHHHHHHHc---CCEEEEc-CcccCchhH
Confidence 3454 4457888999988775222 23322 3321 1 122222222 3334332 222233344
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCcE
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKEL 220 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~v 220 (534)
+ +..+++.. ....|.++++++|. ..+++.+.++++.+.++++.
T Consensus 78 ~-~~~~~~~~-~~~~d~vlv~~gD~Pli~~~~l~~l~~~~~~~~~~ 121 (239)
T cd02517 78 R-IAEVAEKL-DADDDIVVNVQGDEPLIPPEMIDQVVAALKDDPGV 121 (239)
T ss_pred H-HHHHHHhc-CCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCC
Confidence 3 44455544 11138899999998 77999999999887444333
No 152
>PF05060 MGAT2: N-acetylglucosaminyltransferase II (MGAT2); InterPro: IPR007754 N-acetylglucosaminyltransferase II (2.4.1.143 from EC) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides []. Mutations in the MGAT2 gene lead to a congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors []. Synonym(s): UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II, GnT II/MGAT2.; GO: 0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0005795 Golgi stack, 0016021 integral to membrane
Probab=72.22 E-value=27 Score=35.15 Aligned_cols=47 Identities=17% Similarity=0.157 Sum_probs=35.4
Q ss_pred CCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhc
Q 044519 90 YPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLR 137 (534)
Q Consensus 90 ~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~ 137 (534)
.+.+.|+|=++|..+.++..|+|+.+...-...+ +++.-|--+++..
T Consensus 30 ~~~~vivvqVH~r~~yl~~li~sL~~~~~I~~~l-lifSHd~~~~ein 76 (356)
T PF05060_consen 30 NDSIVIVVQVHNRPEYLKLLIDSLSQARGIEEAL-LIFSHDFYSEEIN 76 (356)
T ss_pred CCCEEEEEEECCcHHHHHHHHHHHHHhhCccceE-EEEeccCChHHHH
Confidence 3578999999999999999999998876654444 4466665555555
No 153
>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana.
Probab=71.43 E-value=17 Score=35.19 Aligned_cols=209 Identities=13% Similarity=0.023 Sum_probs=104.1
Q ss_pred CCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 89 SYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 89 ~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
..|+.-+.+|+=-.. +.+..+++-. ..++.+.++.-||..|+--+ . +| ..+..++..
T Consensus 39 ~~~k~Lla~~VG~kqk~~vd~~v~Kf----~~nF~i~LfhYDg~vd~w~~---------~------~w---s~~aiHv~~ 96 (294)
T PF05212_consen 39 KKPKYLLAMTVGIKQKDNVDAIVKKF----SDNFDIMLFHYDGRVDEWDD---------F------EW---SDRAIHVSA 96 (294)
T ss_pred CCCceEEEEEecHHHHhhhhHHHhhh----ccCceEEEEEecCCcCchhh---------c------cc---ccceEEEEe
Confidence 346777777774333 5555554444 23456666677887765322 1 11 112223322
Q ss_pred cCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCch-hhHhHhhhcc
Q 044519 168 KNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECL-MTRLQEMSLD 246 (534)
Q Consensus 168 ~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~-~~~~~~~~~~ 246 (534)
.++.|-.-...-+.=-..+.+|||.+.|.|..++...+.+.+..+ ...+..+.|+........-++ .|. +.-...
T Consensus 97 --~kqtKww~akrfLHPdiv~~YdYiflwDeDL~vd~f~~~ry~~Iv-k~~gLeISQPALd~~~~~~~~~iT~-R~~~~~ 172 (294)
T PF05212_consen 97 --RKQTKWWFAKRFLHPDIVAPYDYIFLWDEDLGVDHFDINRYFEIV-KKEGLEISQPALDPDSSEIHHPITK-RRPDSE 172 (294)
T ss_pred --ccceEEeehhhhcChhhhccceeEEecCCccCcCcCCHHHHHHHH-HHhCCcccCcccCCCCceeeeeEEe-ecCCce
Confidence 222243332333321123589999999999888777777777766 334555555543211110000 010 000001
Q ss_pred cchh-hhhhcccccCccccc----cCCcchhhHHHHHHhCC-CCCCC---ccchHHHHHHHHhCCCEEEEeccCcccccC
Q 044519 247 YHFS-VEQEVGSSTCQFFGF----NGTAGVWRIQAIEDAGG-WKDRT---TVEDMDLAVRASLKGWKFVFVGDLGVKNEL 317 (534)
Q Consensus 247 ~~~~-~~~~~~~~~~~~~~~----~G~~~~~Rr~~l~~~Gg-~~~~~---~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~ 317 (534)
.+.. ..............+ -..+=+|+|++++-+=. +..+. -+=|+.++.-+..+..++..++...+.+..
T Consensus 173 vhr~~~~~~~~~~~~~~ppct~fVEiMAPVFSr~Awrcvw~miqNDLvhGWGLDf~~~~c~~~~~~kiGVVDs~~VvH~g 252 (294)
T PF05212_consen 173 VHRKTRGGPRCCDDSTGPPCTGFVEIMAPVFSRAAWRCVWHMIQNDLVHGWGLDFKWGYCAGDRHKKIGVVDSQYVVHTG 252 (294)
T ss_pred eEeccCCCCCcCCCCCCCCcceEEEEecceechHHHHHHHhcccCCCccccchhhhHHHHhccccccEEEEeeEEEEEcC
Confidence 1110 000000000001111 13344789999977522 22222 255888888887788899988877766655
Q ss_pred CcCHHH
Q 044519 318 PSTFKA 323 (534)
Q Consensus 318 p~t~~~ 323 (534)
..|+..
T Consensus 253 vptLG~ 258 (294)
T PF05212_consen 253 VPTLGG 258 (294)
T ss_pred CCcCCC
Confidence 555544
No 154
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=71.31 E-value=1.2e+02 Score=30.75 Aligned_cols=124 Identities=15% Similarity=0.073 Sum_probs=62.8
Q ss_pred cEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCC-hhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC
Q 044519 92 MVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDST-NEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR 170 (534)
Q Consensus 92 ~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~-D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~ 170 (534)
+|-=.+...||-+.++--+..+- |--..-|+|-.+.| .+..+.-.| .+..+++..-..++.|+..+..
T Consensus 80 rV~D~~~f~~ElDlLeiRl~eL~----~vVD~FVIvEs~~Tf~G~~KpL~f-------~~~~~~f~~~~~KIiy~~l~~~ 148 (356)
T PF04724_consen 80 RVYDCFLFNNELDLLEIRLNELY----DVVDYFVIVESNRTFTGKPKPLYF-------AENKERFAFFHDKIIYVTLDDP 148 (356)
T ss_pred eEEEEEEeCChHHHHHHHHHHhh----CcceEEEEEEECCCcCCCCCCccH-------HHHHHHHHhhhcceEEEEecCc
Confidence 45445555677788888777773 32223343444432 122221111 1122222222356666654432
Q ss_pred -CCCC----------hhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeee
Q 044519 171 -NGYK----------AGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARW 227 (534)
Q Consensus 171 -~g~K----------a~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~ 227 (534)
..|. ..+++...+.+....+|++++-|.|.+|.|+.|..+-. ....|+.-....+.
T Consensus 149 ~~~g~~~~w~~E~~qR~~l~~l~~~~~~~~dDliivSDvDEIP~p~~l~~Lr~-cd~~p~~l~l~lr~ 215 (356)
T PF04724_consen 149 PEKGRKDPWDRENYQRNALNGLLRLAGIQDDDLIIVSDVDEIPSPETLKFLRW-CDGFPEPLHLRLRF 215 (356)
T ss_pred CCCCCCchhHHHHHHHHHHHHHhhhcCCCCCCEEEEcCcccccCHHHHHHHHh-cCCCCCeeEEEeec
Confidence 1111 11222222223346899999999999999999987733 32344444444443
No 155
>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=70.97 E-value=60 Score=34.51 Aligned_cols=101 Identities=18% Similarity=0.125 Sum_probs=60.1
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|..+. ..++.+++++.+... .++.| ++... ++... +.+ .+. ...+.+...+ ...|-+
T Consensus 26 llpi~gk-pli~~~l~~l~~~g~--~~iiv-vv~~~-~~~i~--------~~~----~~~---~~~~~~~~~~-~~~Gt~ 84 (482)
T PRK14352 26 LHTLAGR-SMLGHVLHAAAGLAP--QHLVV-VVGHD-RERVA--------PAV----AEL---APEVDIAVQD-EQPGTG 84 (482)
T ss_pred eceeCCc-cHHHHHHHHHHhcCC--CcEEE-EECCC-HHHHH--------HHh----hcc---CCccEEEeCC-CCCCcH
Confidence 4566564 489999999987642 34444 44322 22222 121 111 1234444333 334478
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcC
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLEN 217 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 217 (534)
+++..|++.......+.++++++|. ..+++.++++++...++
T Consensus 85 ~si~~al~~l~~~~~~~vlV~~gD~P~~~~~~l~~li~~~~~~ 127 (482)
T PRK14352 85 HAVQCALEALPADFDGTVVVTAGDVPLLDGETLADLVATHTAE 127 (482)
T ss_pred HHHHHHHHHhccCCCCeEEEEeCCeeccCHHHHHHHHHHHHhc
Confidence 8888888875111247899999998 57899999999877433
No 156
>cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch. ADP-glucose pyrophosphorylase (glucose-1-phosphate adenylyltransferase) catalyzes a very important step in the biosynthesis of alpha 1,4-glucans (glycogen or starch) in bacteria and plants: synthesis of the activated glucosyl donor, ADP-glucose, from glucose-1-phosphate and ATP. ADP-glucose pyrophosphorylase is a tetrameric allosterically regulated enzyme. While a homotetramer in bacteria, in plant chloroplasts and amyloplasts, it is a heterotetramer of two different, yet evolutionary related, subunits. There are a number of conserved regions in the sequence of bacterial and plant ADP-glucose pyrophosphorylase subunits. It is a subfamily of a very diverse glycosy transferase family 2.
Probab=70.75 E-value=35 Score=31.29 Aligned_cols=110 Identities=11% Similarity=0.084 Sum_probs=58.8
Q ss_pred CCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhh--cCccEEEEEe
Q 044519 90 YPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIE--KGVNVKYETR 167 (534)
Q Consensus 90 ~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~--~~~~v~~~~r 167 (534)
.|+. ++|..|....+..+++.+.+... .++.| |+... .+... +.+.+ ..++.. ...++.++..
T Consensus 19 ~pK~--llpv~g~~pli~~~l~~l~~~gi--~~iiv-v~~~~-~~~i~--------~~~~~-~~~~~~~~~~~~~~~~~~ 83 (200)
T cd02508 19 RAKP--AVPFGGRYRLIDFPLSNMVNSGI--RNVGV-LTQYK-SRSLN--------DHLGS-GKEWDLDRKNGGLFILPP 83 (200)
T ss_pred Ccce--eeEECCeeeeHHHHHHHHHHCCC--CEEEE-EeCCC-hHHHH--------HHHhC-CCcccCCCCCCCEEEeCc
Confidence 4544 67887864688888988887543 33333 44332 22222 11110 001100 0112334321
Q ss_pred -----cCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHh
Q 044519 168 -----KNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLL 215 (534)
Q Consensus 168 -----~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~ 215 (534)
++...|-++++..+.+.....+.|.++++-+|.+.+ ..+.++++...
T Consensus 84 ~~~~~~~~~~Gta~al~~a~~~i~~~~~~~~lv~~gD~v~~-~~~~~~l~~~~ 135 (200)
T cd02508 84 QQRKGGDWYRGTADAIYQNLDYIERSDPEYVLILSGDHIYN-MDYREMLDFHI 135 (200)
T ss_pred ccCCCCCcccCcHHHHHHHHHHHHhCCCCEEEEecCCEEEe-cCHHHHHHHHH
Confidence 123345888998888765222357888999998544 45777777653
No 157
>PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional
Probab=70.12 E-value=35 Score=33.67 Aligned_cols=99 Identities=11% Similarity=0.069 Sum_probs=57.2
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|+++. ..+...|+++....- .++.| |......+ .+++...+...-+.++.|...+++ .|-+
T Consensus 28 Llpv~gk-PmI~~~l~~l~~aGi--~~I~i-i~~~~~~~------------~~~~~l~~g~~~g~~i~y~~q~~~-~Gta 90 (292)
T PRK15480 28 LLPIYDK-PMIYYPLSTLMLAGI--RDILI-ISTPQDTP------------RFQQLLGDGSQWGLNLQYKVQPSP-DGLA 90 (292)
T ss_pred EeEECCE-EHHHHHHHHHHHCCC--CEEEE-EecCCchH------------HHHHHHcCccccCceeEEEECCCC-CCHH
Confidence 6888887 688889998887543 23333 43322111 122222221123567777755444 4589
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
+|+..+.+.. .+.++++++ .|.+....-+.++++..
T Consensus 91 ~Al~~a~~~i--~~~~~~lv~-gD~i~~~~~l~~ll~~~ 126 (292)
T PRK15480 91 QAFIIGEEFI--GGDDCALVL-GDNIFYGHDLPKLMEAA 126 (292)
T ss_pred HHHHHHHHHh--CCCCEEEEE-CCeeeeccCHHHHHHHH
Confidence 9988888765 234666666 55555344467777755
No 158
>cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose. Alpha-D-Glucose-1-phosphate Cytidylyltransferase catalyzes the production of CDP-D-Glucose from alpha-D-Glucose-1-phosphate and MgCTP as substrate. CDP-D-Glucose is the precursor for synthesizing four of the five naturally occurring 3,6-dideoxy sugars-abequose (3,6-dideoxy-D-Xylo-hexose), ascarylose (3,6-dideoxy-L-arabino-hexose), paratose (3,6-dideoxy-D-ribohexose), and tyvelose (3,6-dideoxy-D-arabino-hexose. Deoxysugars are ubiquitous in nature where they function in a variety of biological processes, including cell adhesion, immune response, determination of ABO blood groups, fertilization, antibiotic function, and microbial pathogenicity.
Probab=69.97 E-value=54 Score=31.31 Aligned_cols=37 Identities=16% Similarity=0.069 Sum_probs=29.4
Q ss_pred ChhHHHHHHHhhhccCC-cEEEEecCCCCCCHHHHHHHHHHH
Q 044519 174 KAGALKEGLEKQYVKDC-QFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~-d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
.++++-.+.+.. .. |.++++++|.+.+.|. ..+++..
T Consensus 104 t~~al~~a~~~~---~~~~~~lv~~gD~i~~~dl-~~ll~~h 141 (253)
T cd02524 104 TGGRLKRVRRYL---GDDETFMLTYGDGVSDVNI-NALIEFH 141 (253)
T ss_pred cHHHHHHHHHhc---CCCCeEEEEcCCEEECCCH-HHHHHHH
Confidence 577888887765 44 8899999999988877 7887755
No 159
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose. GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.
Probab=69.92 E-value=56 Score=31.83 Aligned_cols=90 Identities=16% Similarity=0.165 Sum_probs=52.5
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
.+|..++...++.+++.+.+..-. +++.| |... .. . +.+++..++ ...++.++..+. ..|.+
T Consensus 26 ll~l~g~~~li~~~l~~l~~~~~~-~~i~v-vt~~-~~---~--------~~v~~~l~~---~~~~~~ii~ep~-~~gTa 87 (274)
T cd02509 26 FLKLFGDKSLLQQTLDRLKGLVPP-DRILV-VTNE-EY---R--------FLVREQLPE---GLPEENIILEPE-GRNTA 87 (274)
T ss_pred EeEcCCCCcHHHHHHHHHhcCCCC-CcEEE-Eech-HH---H--------HHHHHHHhh---cCCCceEEECCC-CCCcH
Confidence 467777678999999999876422 34433 3332 11 1 123333222 124455554333 33478
Q ss_pred hHHHHHHHhhhc-cCCcEEEEecCCCCCC
Q 044519 176 GALKEGLEKQYV-KDCQFVVIFDADFQPD 203 (534)
Q Consensus 176 ~aln~gl~~a~~-~~~d~v~~lDaD~~~~ 203 (534)
+|+..+...... ...+.++++.+|+...
T Consensus 88 ~ai~~a~~~~~~~~~~~~vlVl~~D~~i~ 116 (274)
T cd02509 88 PAIALAALYLAKRDPDAVLLVLPSDHLIE 116 (274)
T ss_pred HHHHHHHHHHHhcCCCCeEEEecchhccc
Confidence 888877776521 1357999999998875
No 160
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=68.30 E-value=1.2e+02 Score=29.49 Aligned_cols=198 Identities=14% Similarity=0.101 Sum_probs=104.2
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|+|+.+ .+.-+|+.+....-. ++.| |++..+-+..+ ++. .+-..-+.++.|...+++.| -|
T Consensus 25 LlpV~~KP-mi~y~l~~L~~aGI~--dI~I-I~~~~~~~~~~--------~ll----Gdgs~~gv~itY~~Q~~p~G-lA 87 (286)
T COG1209 25 LLPVYDKP-MIYYPLETLMLAGIR--DILI-VVGPEDKPTFK--------ELL----GDGSDFGVDITYAVQPEPDG-LA 87 (286)
T ss_pred cceecCcc-hhHhHHHHHHHcCCc--eEEE-EecCCchhhhh--------hhh----cCccccCcceEEEecCCCCc-HH
Confidence 47898865 566777777665432 2333 44332333333 222 11112378999998877766 88
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhc-CCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhh
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLE-NKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQE 254 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~-~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 254 (534)
.|.-.|-+.. .+.++++++.+..... -+++.+..+.+ +++..+. .. .+.|+.. .--.+++....+...
T Consensus 88 ~Av~~a~~fv--~~~~f~l~LGDNi~~~--~l~~~~~~~~~~~~ga~i~-~~-~V~dP~r-----fGV~e~d~~~~v~~l 156 (286)
T COG1209 88 HAVLIAEDFV--GDDDFVLYLGDNIFQD--GLSELLEHFAEEGSGATIL-LY-EVDDPSR-----YGVVEFDEDGKVIGL 156 (286)
T ss_pred HHHHHHHhhc--CCCceEEEecCceecc--ChHHHHHHHhccCCCcEEE-EE-EcCCccc-----ceEEEEcCCCcEEEe
Confidence 8888777766 3467777776665555 56777777633 2232222 22 2234321 111122211111111
Q ss_pred cccccCccccc-cCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEeccCcccc--cCCcCH
Q 044519 255 VGSSTCQFFGF-NGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFVGDLGVKN--ELPSTF 321 (534)
Q Consensus 255 ~~~~~~~~~~~-~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~~~~~~~--~~p~t~ 321 (534)
.........++ .-...+++.++++.+....+..- .|=+|....+..+|.++.....--.|- -.|+++
T Consensus 157 ~EKP~~P~SNlAvtGlY~~d~~Vf~~~~~ikPS~RGElEITd~i~~~i~~G~~~~~~~~~G~WlDtGt~~sl 228 (286)
T COG1209 157 EEKPKEPKSNLAVTGLYFYDPSVFEAIKQIKPSARGELEITDAIDLYIEKGYLVVAILIRGWWLDTGTPESL 228 (286)
T ss_pred EECCCCCCCceeEEEEEEeChHHHHHHHcCCCCCCCceEehHHHHHHHHcCcEEEEEEccceEEecCChhhH
Confidence 11111111111 12356788899988866654333 345666677889999988876544333 235554
No 161
>cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase. N-terminal domain of the M1P-guanylyltransferase A-isoform like proteins: The proteins of this family are likely to be a isoform of GDP-mannose pyrophosphorylase. Their sequences are highly conserved with mannose-1-phosphate guanyltransferase, but generally about 40-60 bases longer. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repre
Probab=68.13 E-value=46 Score=31.88 Aligned_cols=103 Identities=14% Similarity=0.130 Sum_probs=57.6
Q ss_pred EEeccCchHHHHHHHHHHHcC-CCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCC
Q 044519 96 QIPMYNEKEVYKLSIGAACGL-SWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYK 174 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q-~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~K 174 (534)
.+|+-+. ..|...|+++.++ .. .++.| ++... .+... +-+..... ..+.++.+....+.. |-
T Consensus 25 llpv~g~-plI~~~l~~l~~~~gi--~~i~i-v~~~~-~~~i~--------~~l~~~~~---~~~~~i~~~~~~~~~-Gt 87 (257)
T cd06428 25 LFPVAGK-PMIHHHIEACAKVPDL--KEVLL-IGFYP-ESVFS--------DFISDAQQ---EFNVPIRYLQEYKPL-GT 87 (257)
T ss_pred cCeECCe-eHHHHHHHHHHhcCCC--cEEEE-EecCC-HHHHH--------HHHHhccc---ccCceEEEecCCccC-Cc
Confidence 5677776 8899999999874 32 23333 44432 22222 12221111 124456655433333 47
Q ss_pred hhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhc
Q 044519 175 AGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLE 216 (534)
Q Consensus 175 a~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~ 216 (534)
++++..+.+.......|.++++.+|.+.+.| +.++++...+
T Consensus 88 ~~al~~a~~~l~~~~~~~~lv~~gD~~~~~d-l~~~~~~h~~ 128 (257)
T cd06428 88 AGGLYHFRDQILAGNPSAFFVLNADVCCDFP-LQELLEFHKK 128 (257)
T ss_pred HHHHHHHHHHhhccCCCCEEEEcCCeecCCC-HHHHHHHHHH
Confidence 7787776655311135778899999887655 7777776633
No 162
>cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=65.33 E-value=58 Score=30.10 Aligned_cols=97 Identities=16% Similarity=0.185 Sum_probs=53.0
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|..|. ..+..+++++.+.... ++.| ++... .+ .+++...+....+.++.+...+...| -++
T Consensus 24 l~~~g~-pli~~~l~~l~~~~~~--~iiv-v~~~~-~~------------~i~~~~~~~~~~~~~i~~~~~~~~~g-~~~ 85 (220)
T cd06426 24 LKVGGK-PILETIIDRFIAQGFR--NFYI-SVNYL-AE------------MIEDYFGDGSKFGVNISYVREDKPLG-TAG 85 (220)
T ss_pred CeECCc-chHHHHHHHHHHCCCc--EEEE-ECccC-HH------------HHHHHHCCccccCccEEEEECCCCCc-chH
Confidence 555665 6899999999876432 3433 43322 22 12222211111234555654333333 567
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhc
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLE 216 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~ 216 (534)
++..+.+. ..|.++++.+|.+.+.+ +.++++.+.+
T Consensus 86 ~l~~~~~~----~~~~~lv~~~D~i~~~~-~~~l~~~~~~ 120 (220)
T cd06426 86 ALSLLPEK----PTDPFLVMNGDILTNLN-YEHLLDFHKE 120 (220)
T ss_pred HHHHHHhh----CCCCEEEEcCCEeeccC-HHHHHHHHHh
Confidence 76544432 36778889999876654 5677777643
No 163
>PF01697 Glyco_transf_92: Glycosyltransferase family 92; InterPro: IPR008166 This entry represents a region approximately 300 residues long that is of unknown function. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues.
Probab=65.08 E-value=75 Score=30.80 Aligned_cols=104 Identities=16% Similarity=0.084 Sum_probs=57.1
Q ss_pred EEEEE-eccC-chH--HHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 93 VLVQI-PMYN-EKE--VYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 93 VsViI-P~yn-e~~--~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
++|++ |.|. |++ .+.+-|+....+. .+++.++. .+++++..+ +++.+.+. | .+.+..-+
T Consensus 3 ~~vCv~pl~~~~~~~~~l~e~ie~~~~~G--~~~~~~Y~-~~~~~~~~~---------vL~~Y~~~----g-~v~~~~w~ 65 (285)
T PF01697_consen 3 FVVCVSPLFGNEDDWLQLIEWIEYHRLLG--VDHFYFYD-NSSSPSVRK---------VLKEYERS----G-YVEVIPWP 65 (285)
T ss_pred EEEEccchhcccccHHHHHHHHHHHHHhC--CCEEEEEE-ccCCHHHHH---------hHHHHhhc----C-eEEEEEcc
Confidence 45555 7776 533 6777777766662 34444422 334444433 66655432 2 34444321
Q ss_pred -------------CCC-----CCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHH----HHHHHHHH
Q 044519 169 -------------NRN-----GYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDF----LWRTIPYL 214 (534)
Q Consensus 169 -------------~~~-----g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~----L~~lv~~~ 214 (534)
+.+ .+...+.|.++... ....+|++++|-|..+-|.- ...+...+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~q~~a~~DCl~r~-~~~~~~v~f~DiDE~lvP~~~~~~~~~~~~~l 132 (285)
T PF01697_consen 66 LRPKFPDFPSPFPDPNSSVERRGQIAAYNDCLLRY-RYRAKWVAFIDIDEFLVPTNAPTYPEEFEDLL 132 (285)
T ss_pred cccccCCcccchhhhhhHHHHHHHHHHHHHHHHHh-hhhceEEEEeccccEEEeccccchhhHHHHHH
Confidence 111 12456677777764 45788999999997764333 44444444
No 164
>PF07507 WavE: WavE lipopolysaccharide synthesis; InterPro: IPR011122 These proteins are encoded by putative wav gene clusters, which are responsible for the synthesis of the core oligosaccharide (OS) region of Vibrio cholerae lipopolysaccharide [].
Probab=64.73 E-value=32 Score=34.19 Aligned_cols=47 Identities=9% Similarity=0.114 Sum_probs=30.2
Q ss_pred HHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH-hcCCcEEEEeeeeE
Q 044519 179 KEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL-LENKELGLVQARWK 228 (534)
Q Consensus 179 n~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~-~~~~~v~~V~~~~~ 228 (534)
.+|++++ +.+|++=+=+|..+..+.+-+..+.+ ..+++......+..
T Consensus 88 ~aGL~~~---~~~Ya~KlRtD~~l~~~~~l~~~~~~~~~~~~~~~~~~RIv 135 (311)
T PF07507_consen 88 LAGLKAA---KTKYAMKLRTDNRLTGNNFLDLYEKYPDRESNYSFFNERIV 135 (311)
T ss_pred HHHHHHh---CCceEEEEcccccccchHHHHHHHHhcccCcccccccCcEE
Confidence 5788988 89999999999888555444444444 22234444444433
No 165
>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=64.69 E-value=89 Score=32.76 Aligned_cols=99 Identities=11% Similarity=0.043 Sum_probs=58.3
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|.-+ ...++.+|+++.+... .++.| |+... ++..+ +...+ ..++.++..+ ...|-+
T Consensus 23 ll~v~g-kpli~~~l~~l~~~g~--~~iiv-vv~~~-~~~i~------------~~~~~----~~~i~~v~~~-~~~G~~ 80 (450)
T PRK14360 23 LHPLGG-KSLVERVLDSCEELKP--DRRLV-IVGHQ-AEEVE------------QSLAH----LPGLEFVEQQ-PQLGTG 80 (450)
T ss_pred cCEECC-hhHHHHHHHHHHhCCC--CeEEE-EECCC-HHHHH------------HHhcc----cCCeEEEEeC-CcCCcH
Confidence 355544 4889999999987643 23434 33322 22222 22211 1245566333 334467
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcC
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLEN 217 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 217 (534)
+++..+++.. ....+.++++|+|. ..+++.++++++.+.+.
T Consensus 81 ~sv~~~~~~l-~~~~~~vlV~~~D~P~i~~~~l~~ll~~~~~~ 122 (450)
T PRK14360 81 HAVQQLLPVL-KGFEGDLLVLNGDVPLLRPETLEALLNTHRSS 122 (450)
T ss_pred HHHHHHHHHh-hccCCcEEEEeCCccccCHHHHHHHHHHHHhc
Confidence 7787777764 11245678899997 56899999998877443
No 166
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=64.33 E-value=77 Score=33.21 Aligned_cols=94 Identities=19% Similarity=0.051 Sum_probs=57.6
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|.-+. ..++.+|+++.+.. +++.| +.+. .++ .+++... ..+.++.++. ..|-+
T Consensus 22 l~~v~gk-pli~~~l~~l~~~~---~~i~v-v~~~-~~~------------~i~~~~~------~~~~~~~~~~-~~g~~ 76 (448)
T PRK14357 22 LHKISGK-PMINWVIDTAKKVA---QKVGV-VLGH-EAE------------LVKKLLP------EWVKIFLQEE-QLGTA 76 (448)
T ss_pred eeEECCe-eHHHHHHHHHHhcC---CcEEE-EeCC-CHH------------HHHHhcc------cccEEEecCC-CCChH
Confidence 5666554 78899999888742 34433 4332 121 1212111 1234443333 33478
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhc
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLE 216 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~ 216 (534)
+++..+.+.. .+.|.++++++|. ..+++.++++++.+.+
T Consensus 77 ~ai~~a~~~l--~~~~~vlv~~gD~p~i~~~~i~~l~~~~~~ 116 (448)
T PRK14357 77 HAVMCARDFI--EPGDDLLILYGDVPLISENTLKRLIEEHNR 116 (448)
T ss_pred HHHHHHHHhc--CcCCeEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 8888888765 2358999999997 5688889999887743
No 167
>COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism]
Probab=63.54 E-value=70 Score=30.24 Aligned_cols=95 Identities=17% Similarity=0.195 Sum_probs=59.1
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
+....++.+|+.++. .|..+.+|+++....|+..+ +..+ ...+.++.++. ...........
T Consensus 30 ~g~pll~~tl~~f~~--~~~i~~Ivvv~~~~~~~~~~--------~~~~------~~~~~~v~~v~---GG~~R~~SV~~ 90 (230)
T COG1211 30 GGRPLLEHTLEAFLE--SPAIDEIVVVVSPEDDPYFE--------KLPK------LSADKRVEVVK---GGATRQESVYN 90 (230)
T ss_pred CCEEehHHHHHHHHh--CcCCCeEEEEEChhhhHHHH--------Hhhh------hccCCeEEEec---CCccHHHHHHH
Confidence 455678999999966 44444444466554555444 2221 12344555551 12225667788
Q ss_pred HHHhhhccCCcEEEEecCC-CCCCHHHHHHHHHHH
Q 044519 181 GLEKQYVKDCQFVVIFDAD-FQPDEDFLWRTIPYL 214 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD-~~~~pd~L~~lv~~~ 214 (534)
|++.......++|++.|+= -..+++.+.+++...
T Consensus 91 gL~~~~~~~~~~VlvHDaaRPf~~~~~i~~li~~~ 125 (230)
T COG1211 91 GLQALSKYDSDWVLVHDAARPFLTPKLIKRLIELA 125 (230)
T ss_pred HHHHhhccCCCEEEEeccccCCCCHHHHHHHHHhh
Confidence 8887722248999999998 566999999999443
No 168
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=62.98 E-value=65 Score=33.07 Aligned_cols=39 Identities=26% Similarity=0.358 Sum_probs=31.7
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHh
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLL 215 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 215 (534)
...++..|++.. +.|++++.|+|. .++++.++++++.+.
T Consensus 83 r~~SV~~gL~~l---~~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 83 RQESVRNALEAL---DSEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred HHHHHHHHHHhc---CCCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 456778888876 569999999994 559999999999873
No 169
>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=62.58 E-value=80 Score=33.60 Aligned_cols=98 Identities=15% Similarity=0.165 Sum_probs=58.4
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|.-+. ..++.+++++.+... +++.| ++... .+..+ +..+ +.++.++..+ ...|.+
T Consensus 29 llpi~gk-pli~~~l~~l~~~gi--~~ivv-v~~~~-~~~i~------------~~~~-----~~~i~~v~~~-~~~Gt~ 85 (481)
T PRK14358 29 LHPVAGR-PMVAWAVKAARDLGA--RKIVV-VTGHG-AEQVE------------AALQ-----GSGVAFARQE-QQLGTG 85 (481)
T ss_pred ecEECCe-eHHHHHHHHHHhCCC--CeEEE-EeCCC-HHHHH------------HHhc-----cCCcEEecCC-CcCCcH
Confidence 4565554 788899999887642 34433 44332 22222 2221 2346666433 333578
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcC
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLEN 217 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 217 (534)
+++..|++.....+.+ ++++++|. .++++.++++++...++
T Consensus 86 ~al~~~~~~l~~~~~~-~lV~~gD~P~i~~~~l~~ll~~~~~~ 127 (481)
T PRK14358 86 DAFLSGASALTEGDAD-ILVLYGDTPLLRPDTLRALVADHRAQ 127 (481)
T ss_pred HHHHHHHHHhhCCCCc-EEEEeCCeeccCHHHHHHHHHHHHhc
Confidence 8888888764111234 67799998 67888999998877443
No 170
>PHA02688 ORF059 IMV protein VP55; Provisional
Probab=62.31 E-value=93 Score=30.67 Aligned_cols=44 Identities=23% Similarity=0.347 Sum_probs=35.7
Q ss_pred cCCcEEEEecCCCCC-CHHHHHHHHHHHhcCCcEEEEeeeeEeecC
Q 044519 188 KDCQFVVIFDADFQP-DEDFLWRTIPYLLENKELGLVQARWKFVNA 232 (534)
Q Consensus 188 ~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~ 232 (534)
+..+|++++++|..+ ++..+..++..| .+.+++++|-+....+.
T Consensus 115 ~~~~yivVlEDDnTi~~~~~~~~~I~~M-~~n~idilQLre~~~~~ 159 (323)
T PHA02688 115 KEDEYIVVVEDDNTLRDITTLHPIIKAM-KEKNIDILQLRETLHNN 159 (323)
T ss_pred cCCCeEEEEcCCCcccccHHHHHHHHHH-HhcCeEEEEeehhhhCC
Confidence 358999999999666 888899999999 55689999997555544
No 171
>PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed
Probab=61.90 E-value=1.4e+02 Score=27.86 Aligned_cols=42 Identities=24% Similarity=0.251 Sum_probs=33.1
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcC
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLEN 217 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~ 217 (534)
...++..|++.. .+.|.++++|+|.- ++++.++++++.+.++
T Consensus 82 ~~~sv~~~l~~~--~~~d~vlv~~~D~P~i~~~~i~~li~~~~~~ 124 (227)
T PRK00155 82 RQDSVLNGLQAL--PDDDWVLVHDAARPFLTPDDIDRLIEAAEET 124 (227)
T ss_pred HHHHHHHHHHhC--CCCCEEEEccCccCCCCHHHHHHHHHHHhhC
Confidence 567777787764 35789999999955 5999999999987444
No 172
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=60.51 E-value=83 Score=29.93 Aligned_cols=113 Identities=14% Similarity=-0.007 Sum_probs=54.5
Q ss_pred EEEeccCc--hHHHHHHHHHHHcCCCCCCceEEEEE-cCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCC
Q 044519 95 VQIPMYNE--KEVYKLSIGAACGLSWPSDRLIVQVL-DDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRN 171 (534)
Q Consensus 95 ViIP~yne--~~~l~~~L~sl~~q~yp~~~~~I~V~-Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~ 171 (534)
|++.+-++ ...+.-++.|+++-.-. .+.++|. |+-+++..+ .+++..+. .+.++.++..+...
T Consensus 3 i~~~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~~~---------~L~~~~~~---~~~~i~~~~~~~~~ 68 (246)
T cd00505 3 IVIVATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTFKA---------ALDNLRKL---YNFNYELIPVDILD 68 (246)
T ss_pred EEEEecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccccHHHHH---------HHHHHHhc---cCceEEEEeccccC
Confidence 44445443 37788899999875533 3444444 443443333 34333221 23445554332111
Q ss_pred -C---------CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEE
Q 044519 172 -G---------YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLV 223 (534)
Q Consensus 172 -g---------~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V 223 (534)
. .++.-....+... ..+.|=|+.+|+|.++-.| +.++...-.++..+++|
T Consensus 69 ~~~~~~~~~~~~~~~y~RL~i~~l-lp~~~kvlYLD~D~iv~~d-i~~L~~~~l~~~~~aav 128 (246)
T cd00505 69 SVDSEHLKRPIKIVTLTKLHLPNL-VPDYDKILYVDADILVLTD-IDELWDTPLGGQELAAA 128 (246)
T ss_pred cchhhhhcCccccceeHHHHHHHH-hhccCeEEEEcCCeeeccC-HHHHhhccCCCCeEEEc
Confidence 0 0110011111111 1258999999999988643 45554432233445554
No 173
>PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional
Probab=59.77 E-value=59 Score=33.22 Aligned_cols=39 Identities=21% Similarity=0.285 Sum_probs=33.6
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHH
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYL 214 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~ 214 (534)
|-.+++..|++.. +.|+++++++|. .++++.+++++..+
T Consensus 79 G~~~si~~gl~~~---~~~~vlv~~~D~P~i~~~~i~~L~~~~ 118 (366)
T PRK14489 79 GPLSGILAGLEHA---DSEYLFVVACDTPFLPENLVKRLSKAL 118 (366)
T ss_pred ChHHHHHHHHHhc---CCCcEEEeeCCcCCCCHHHHHHHHHHh
Confidence 5677888899887 789999999995 56999999999876
No 174
>PLN03183 acetylglucosaminyltransferase family protein; Provisional
Probab=59.32 E-value=2.3e+02 Score=29.56 Aligned_cols=106 Identities=20% Similarity=0.137 Sum_probs=61.0
Q ss_pred CCCCcEEEEEecc-CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHH--HhhcCccEEE
Q 044519 88 KSYPMVLVQIPMY-NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLK--WIEKGVNVKY 164 (534)
Q Consensus 88 ~~~P~VsViIP~y-ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~--~~~~~~~v~~ 164 (534)
...|+++.+|-++ |+.+.++++|+++- .|+..+.|.++-.|++.... ++. ...+. ......||.+
T Consensus 75 ~~~~r~AYLI~~h~~d~~~l~RLL~aLY---hprN~y~IHlDkKS~~~er~--------~l~-~~v~~~~~~~~~~NV~v 142 (421)
T PLN03183 75 DKLPRFAYLVSGSKGDLEKLWRTLRALY---HPRNQYVVHLDLESPAEERL--------ELA-SRVENDPMFSKVGNVYM 142 (421)
T ss_pred CCCCeEEEEEEecCCcHHHHHHHHHHhc---CCCceEEEEecCCCChHHHH--------HHH-HHhhccchhhccCcEEE
Confidence 4578999999998 77799999988873 35445555454446654333 121 11111 1123467877
Q ss_pred EEecC--CCCCCh------hHHHHHHHhhhccCCcEEEEecCCCCC--CHHHH
Q 044519 165 ETRKN--RNGYKA------GALKEGLEKQYVKDCQFVVIFDADFQP--DEDFL 207 (534)
Q Consensus 165 ~~r~~--~~g~Ka------~aln~gl~~a~~~~~d~v~~lDaD~~~--~pd~L 207 (534)
+.+.. .-||-. .++...++.+ .+.||+..+.+.+.| +.|.+
T Consensus 143 l~k~~~V~WGG~S~V~AtL~~m~~LL~~~--~~WDyfinLSGsDyPLkTqdel 193 (421)
T PLN03183 143 ITKANLVTYRGPTMVANTLHACAILLKRS--KDWDWFINLSASDYPLVTQDDL 193 (421)
T ss_pred EecceeeccCChHHHHHHHHHHHHHHhhC--CCCCEEEEccCCcccccCHHHH
Confidence 65432 112211 1222333322 578999999999988 56543
No 175
>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=59.06 E-value=1.1e+02 Score=32.22 Aligned_cols=95 Identities=8% Similarity=0.024 Sum_probs=57.1
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|.-+. ..++.+++++.+... +++.| ++... ++..+ +... ..+.+...+ ...|-+
T Consensus 24 ll~i~Gk-pli~~~l~~l~~~gi--~~iiv-vv~~~-~~~i~------------~~~~------~~~~~~~~~-~~~g~~ 79 (458)
T PRK14354 24 LHKVCGK-PMVEHVVDSVKKAGI--DKIVT-VVGHG-AEEVK------------EVLG------DRSEFALQE-EQLGTG 79 (458)
T ss_pred hCEeCCc-cHHHHHHHHHHhCCC--CeEEE-EeCCC-HHHHH------------HHhc------CCcEEEEcC-CCCCHH
Confidence 3566665 788999999987542 33433 43332 22222 1111 123444332 333467
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHh
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLL 215 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 215 (534)
+++..+++.. ....|.++++++|. ..+++.++++++...
T Consensus 80 ~al~~a~~~l-~~~~d~vlv~~~D~p~i~~~~l~~li~~~~ 119 (458)
T PRK14354 80 HAVMQAEEFL-ADKEGTTLVICGDTPLITAETLKNLIDFHE 119 (458)
T ss_pred HHHHHHHHHh-cccCCeEEEEECCccccCHHHHHHHHHHHH
Confidence 7888887764 11247899999997 679999999998773
No 176
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP
Probab=59.01 E-value=52 Score=30.76 Aligned_cols=92 Identities=14% Similarity=0.105 Sum_probs=54.7
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC-CCCCC
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN-RNGYK 174 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~-~~g~K 174 (534)
.+|.-+ ...++.+++++.+... .++.| |+.. ..+... +..++ +.++.++..++ ...|-
T Consensus 23 l~~~~g-~~li~~~l~~l~~~gi--~~i~v-v~~~-~~~~~~------------~~~~~----~~~~~~~~~~~~~~~g~ 81 (229)
T cd02523 23 LLEING-KPLLERQIETLKEAGI--DDIVI-VTGY-KKEQIE------------ELLKK----YPNIKFVYNPDYAETNN 81 (229)
T ss_pred eeeECC-EEHHHHHHHHHHHCCC--ceEEE-Eecc-CHHHHH------------HHHhc----cCCeEEEeCcchhhhCc
Confidence 345544 4789999999987643 23433 4332 222222 22221 13455553332 23457
Q ss_pred hhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHH
Q 044519 175 AGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIP 212 (534)
Q Consensus 175 a~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~ 212 (534)
++++..+.+.. .+.++++++|...+++.++.+.+
T Consensus 82 ~~s~~~~~~~~----~~~~lv~~~D~~~~~~~~~~~~~ 115 (229)
T cd02523 82 IYSLYLARDFL----DEDFLLLEGDVVFDPSILERLLS 115 (229)
T ss_pred HHHHHHHHHHc----CCCEEEEeCCEecCHHHHHHHHc
Confidence 78888888764 47789999999998887776553
No 177
>PLN03193 beta-1,3-galactosyltransferase; Provisional
Probab=58.97 E-value=1.3e+02 Score=30.93 Aligned_cols=113 Identities=14% Similarity=0.069 Sum_probs=63.2
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEe---ecCCCchhhHhHhhhcccchhhhhhcccccCccccc
Q 044519 189 DCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKF---VNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGF 265 (534)
Q Consensus 189 ~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~---~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (534)
+.+|++-.|+|+.+..+.|...+..-...++ +..|.... .+..... + .+.+. +.. .......+..+
T Consensus 236 dAkF~mK~DDDvfVnv~~L~~~L~~~~~~~r--lYiG~m~~gPvr~~~~~k---y--~epe~-w~~---~~~~~~YPpyA 304 (408)
T PLN03193 236 DADFYVKVDDDVHVNIATLGETLVRHRKKPR--VYIGCMKSGPVLSQKGVR---Y--HEPEY-WKF---GENGNKYFRHA 304 (408)
T ss_pred CCeEEEEcCCCceEcHHHHHHHHHhcCCCCC--EEEEecccCccccCCCCc---C--cCccc-ccc---cCccccCCCCC
Confidence 7899999999999999888877754322333 33333211 1111100 0 00000 000 00111223336
Q ss_pred cCCcchhhHHHHHHhCCCCC---CCccchHHHHHHHHhCCCEEEEeccCccc
Q 044519 266 NGTAGVWRIQAIEDAGGWKD---RTTVEDMDLAVRASLKGWKFVFVGDLGVK 314 (534)
Q Consensus 266 ~G~~~~~Rr~~l~~~Gg~~~---~~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 314 (534)
.|.+.++.+++...+-.-.. ..-.||..++..+. |..+.++.+....
T Consensus 305 sG~gYVlS~DLa~~I~~n~~~L~~y~~EDV~vG~Wl~--~L~V~~vdd~~fc 354 (408)
T PLN03193 305 TGQLYAISKDLASYISINQHVLHKYANEDVSLGSWFI--GLDVEHIDDRRLC 354 (408)
T ss_pred CcceEEehHHHHHHHHhChhhhcccCcchhhhhhHhc--cCCceeeeccccc
Confidence 79999999999877631111 12389999999885 6666677665543
No 178
>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=58.38 E-value=1.1e+02 Score=31.99 Aligned_cols=95 Identities=11% Similarity=0.071 Sum_probs=56.0
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|. +....++.+++++.+.. .+++.| |+....+ .+++... ..++.++..+.. .|-++
T Consensus 28 ~~i-~gkpli~~~l~~l~~~~--~~~iiv-v~~~~~~-------------~i~~~~~-----~~~~~~v~~~~~-~Gt~~ 84 (456)
T PRK14356 28 QTL-LGEPMLRFVYRALRPLF--GDNVWT-VVGHRAD-------------MVRAAFP-----DEDARFVLQEQQ-LGTGH 84 (456)
T ss_pred ccc-CCCcHHHHHHHHHHhcC--CCcEEE-EECCCHH-------------HHHHhcc-----ccCceEEEcCCC-CCcHH
Confidence 444 34568888898887643 233333 4433221 1112111 124455543333 34677
Q ss_pred HHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHH
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYL 214 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~ 214 (534)
++..+++.....+.|.++++++|. .++++.++++++..
T Consensus 85 al~~a~~~l~~~~~d~vlv~~gD~P~i~~~~i~~li~~~ 123 (456)
T PRK14356 85 ALQCAWPSLTAAGLDRVLVVNGDTPLVTTDTIDDFLKEA 123 (456)
T ss_pred HHHHHHHHHhhcCCCcEEEEeCCcccCCHHHHHHHHHHH
Confidence 887777654212468999999998 67899999998876
No 179
>TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase. Members of this family are the enzyme glucose-1-phosphate cytidylyltransferase, also called CDP-glucose pyrophosphorylase, the product of the rfbF gene.
Probab=57.68 E-value=1.4e+02 Score=28.47 Aligned_cols=145 Identities=16% Similarity=0.080 Sum_probs=68.7
Q ss_pred CCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhc-CCcEEEEeeeeEeecCCCchhhHhHhhhcccchh
Q 044519 172 GYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLE-NKELGLVQARWKFVNADECLMTRLQEMSLDYHFS 250 (534)
Q Consensus 172 g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~-~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~ 250 (534)
.|-++++..+.+.. +.|.++++++|.+.+.| +.+++....+ +.++-++.. .+.. .+ .. +..+.. .
T Consensus 103 ~gt~~al~~~~~~i---~~e~flv~~gD~i~~~d-l~~~~~~h~~~~~d~tl~~~----~~~~-~y-G~---v~~d~~-~ 168 (254)
T TIGR02623 103 TQTGGRLKRVREYL---DDEAFCFTYGDGVADID-IKALIAFHRKHGKKATVTAV----QPPG-RF-GA---LDLEGE-Q 168 (254)
T ss_pred CCcHHHHHHHHHhc---CCCeEEEEeCCeEecCC-HHHHHHHHHHcCCCEEEEEe----cCCC-cc-cE---EEECCC-e
Confidence 34678888888775 45677899999887655 4556554422 233332221 1111 10 01 111110 0
Q ss_pred hhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCcccccCCcCHHHHHHHHhh
Q 044519 251 VEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVKNELPSTFKAYRYQQHR 330 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~R 330 (534)
+..............+....+++++.++.+.. .......|+-..+..+|.-..|.-+- .+ ..-.|..++..-+.+
T Consensus 169 V~~~~Ekp~~~~~~i~~Giyi~~~~il~~l~~---~~~~~~~d~i~~l~~~~~v~~~~~~g-~w-~dIgt~~~~~~~~~~ 243 (254)
T TIGR02623 169 VTSFQEKPLGDGGWINGGFFVLNPSVLDLIDG---DATVWEQEPLETLAQRGELSAYEHSG-FW-QPMDTLRDKNYLEEL 243 (254)
T ss_pred EEEEEeCCCCCCCeEEEEEEEEcHHHHhhccc---cCchhhhhHHHHHHhCCCEEEEeCCC-EE-ecCCchHHHHHHHHH
Confidence 10000100000112345577888998865521 11122345566677777533333322 12 233444566556666
Q ss_pred hccch
Q 044519 331 WSCGP 335 (534)
Q Consensus 331 W~~G~ 335 (534)
|..|.
T Consensus 244 ~~~~~ 248 (254)
T TIGR02623 244 WESGR 248 (254)
T ss_pred HHcCC
Confidence 66654
No 180
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis]
Probab=57.42 E-value=84 Score=32.01 Aligned_cols=99 Identities=19% Similarity=0.242 Sum_probs=67.0
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|+-|. +.++..|+++.++... + |+++-+...+ .++++..+....+.++.|.....+.| -++
T Consensus 27 lpI~gk-Pii~~~l~~L~~~Gv~--e--ivi~~~y~~~------------~i~~~~~d~~~~~~~I~y~~e~~~lG-Tag 88 (358)
T COG1208 27 LPIAGK-PLIEYVLEALAAAGVE--E--IVLVVGYLGE------------QIEEYFGDGEGLGVRITYVVEKEPLG-TAG 88 (358)
T ss_pred ceeCCc-cHHHHHHHHHHHCCCc--E--EEEEeccchH------------HHHHHHhcccccCCceEEEecCCcCc-cHH
Confidence 566554 5788899999886542 2 3344332222 33333333223468888886555444 899
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcC
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLEN 217 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~ 217 (534)
++..+.+.. ..|-++++..|.+.+-| +..++....++
T Consensus 89 ~l~~a~~~l---~~~~f~v~~GDv~~~~d-l~~l~~~~~~~ 125 (358)
T COG1208 89 ALKNALDLL---GGDDFLVLNGDVLTDLD-LSELLEFHKKK 125 (358)
T ss_pred HHHHHHHhc---CCCcEEEEECCeeeccC-HHHHHHHHHhc
Confidence 999999987 65889999999999988 88888877444
No 181
>TIGR03552 F420_cofC 2-phospho-L-lactate guanylyltransferase CofC. Members of this protein family are the CofC enzyme of coenzyme F420 biosynthesis.
Probab=56.84 E-value=1.1e+02 Score=27.61 Aligned_cols=51 Identities=18% Similarity=0.050 Sum_probs=37.0
Q ss_pred cEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHH
Q 044519 161 NVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYL 214 (534)
Q Consensus 161 ~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~ 214 (534)
++.++..+. .|...++..|+++. ..+++.++++-+|.- ++++.+++++..+
T Consensus 65 ~v~~i~~~~--~G~~~si~~al~~~-~~~~~~vlv~~~D~P~l~~~~i~~l~~~~ 116 (195)
T TIGR03552 65 GAPVLRDPG--PGLNNALNAALAEA-REPGGAVLILMADLPLLTPRELKRLLAAA 116 (195)
T ss_pred CCEEEecCC--CCHHHHHHHHHHHh-hccCCeEEEEeCCCCCCCHHHHHHHHHhc
Confidence 345553332 25788888888865 224579999999966 5999999999887
No 182
>cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat. Spore coat polysaccharide biosynthesis protein F (spsF) is a glycosyltransferase implicated in the synthesis of the spore coat in a variety of bacteria challenged by stress as starvation. The spsF gene is expressed in the late stage of coat development responsible for a terminal step in coat formation that involves the glycosylation of the coat. SpsF gene mutation resulted in spores that appeared normal. But, the spores tended to aggregate and had abnormal adsorption properties, indicating a surface alteration.
Probab=55.40 E-value=1.1e+02 Score=28.58 Aligned_cols=28 Identities=21% Similarity=0.313 Sum_probs=24.1
Q ss_pred CCcEEEEecCCCCC-CHHHHHHHHHHHhc
Q 044519 189 DCQFVVIFDADFQP-DEDFLWRTIPYLLE 216 (534)
Q Consensus 189 ~~d~v~~lDaD~~~-~pd~L~~lv~~~~~ 216 (534)
+.|+++++++|.-. +++.+++++..+.+
T Consensus 87 ~~d~vli~~~D~P~i~~~~i~~li~~~~~ 115 (233)
T cd02518 87 NADVVVRITGDCPLIDPEIIDAVIRLFLK 115 (233)
T ss_pred CCCEEEEeCCCCCCCCHHHHHHHHHHHHh
Confidence 68999999999654 99999999998743
No 183
>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.
Probab=55.36 E-value=61 Score=30.75 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=49.8
Q ss_pred EEEEEeccC-chHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE-ecC-
Q 044519 93 VLVQIPMYN-EKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET-RKN- 169 (534)
Q Consensus 93 VsViIP~yn-e~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~-r~~- 169 (534)
|+-+|-+|+ +.+.+++.++.+- .|+..+.|.|+-.+++...+ .+++.. ....++.++. |..
T Consensus 1 iAylil~h~~~~~~~~~l~~~l~---~~~~~f~iHiD~k~~~~~~~---------~~~~~~----~~~~nv~~v~~r~~v 64 (244)
T PF02485_consen 1 IAYLILAHKNDPEQLERLLRLLY---HPDNDFYIHIDKKSPDYFYE---------EIKKLI----SCFPNVHFVPKRVDV 64 (244)
T ss_dssp EEEEEEESS--HHHHHHHHHHH-----TTSEEEEEE-TTS-HHHHH---------HHHHHH----CT-TTEEE-SS----
T ss_pred CEEEEEecCCCHHHHHHHHHHhc---CCCCEEEEEEcCCCChHHHH---------HHHHhc----ccCCceeeccccccc
Confidence 456788877 5578877777764 34444555444445544333 333222 2346777774 221
Q ss_pred CCCC--ChhHHHHHHHhhhc--cCCcEEEEecCCCCC--CHHHHHHHHH
Q 044519 170 RNGY--KAGALKEGLEKQYV--KDCQFVVIFDADFQP--DEDFLWRTIP 212 (534)
Q Consensus 170 ~~g~--Ka~aln~gl~~a~~--~~~d~v~~lDaD~~~--~pd~L~~lv~ 212 (534)
.-|| ...|.-.+++.|.. .+.||+..+..++.| +.+.+.+...
T Consensus 65 ~WG~~S~v~A~l~ll~~al~~~~~~~y~~llSg~D~Pl~s~~~i~~~l~ 113 (244)
T PF02485_consen 65 RWGGFSLVEATLNLLREALKRDGDWDYFILLSGQDYPLKSNEEIHEFLE 113 (244)
T ss_dssp -TTSHHHHHHHHHHHHHHHHH-S---EEEEEETTEEESS-HHHHHHHHH
T ss_pred ccCCccHHHHHHHHHHHHHhcCCCCcEEEEcccccccccchHHHHHHHH
Confidence 1122 33333444444433 388999999888887 5555554443
No 184
>cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2. N-terminal domain of gamma subunit of the eukaryotic translation initiation factor 2B (eIF-2B): eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit gamma shares sequence similarity with epsilon subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.
Probab=54.35 E-value=1.3e+02 Score=27.84 Aligned_cols=99 Identities=12% Similarity=0.076 Sum_probs=53.2
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHh--hc-CccEEEEEecCCCC
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWI--EK-GVNVKYETRKNRNG 172 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~--~~-~~~v~~~~r~~~~g 172 (534)
++|.-|. ..+..+++.+.+.. -.++.| |+.....+ .+++..+++. .. +..+.+. .+....
T Consensus 25 Llpv~g~-pli~~~l~~l~~~g--~~~iiv-v~~~~~~~------------~i~~~l~~~~~~~~~~~~~~~~-~~~~~~ 87 (214)
T cd04198 25 LLPVANK-PMIWYPLDWLEKAG--FEDVIV-VVPEEEQA------------EISTYLRSFPLNLKQKLDEVTI-VLDEDM 87 (214)
T ss_pred cCEECCe-eHHHHHHHHHHHCC--CCeEEE-EECHHHHH------------HHHHHHHhcccccCcceeEEEe-cCCCCc
Confidence 5666665 78889999998743 234444 44321111 2222222210 01 1222333 233444
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhc
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLE 216 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~ 216 (534)
|-++++..+.+.. +.+ ++++.+|.+.+.+ +..+++...+
T Consensus 88 gt~~al~~~~~~i---~~d-~lv~~~D~i~~~~-l~~~l~~h~~ 126 (214)
T cd04198 88 GTADSLRHIRKKI---KKD-FLVLSCDLITDLP-LIELVDLHRS 126 (214)
T ss_pred ChHHHHHHHHhhc---CCC-EEEEeCccccccC-HHHHHHHHhc
Confidence 5788888888764 444 7888999765554 5666665533
No 185
>PLN03133 beta-1,3-galactosyltransferase; Provisional
Probab=53.75 E-value=3.4e+02 Score=29.91 Aligned_cols=108 Identities=14% Similarity=0.060 Sum_probs=62.2
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEe-----ecCCCchhhHhHhhhcccchhhhhhcccccCccc
Q 044519 189 DCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKF-----VNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFF 263 (534)
Q Consensus 189 ~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~-----~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (534)
+.+|++-.|+|+.+..+.|.+.+... ++.-+...|.... .++...|.-... .. .......
T Consensus 475 ~akFilK~DDDvFVnv~~Ll~~L~~~--~~~~~Ly~G~v~~~~~PiRd~~sKWYVs~~-----------ey--p~~~YPp 539 (636)
T PLN03133 475 SAKYVMKTDDDAFVRVDEVLASLKRT--NVSHGLLYGLINSDSQPHRNPDSKWYISPE-----------EW--PEETYPP 539 (636)
T ss_pred CceEEEEcCCceEEcHHHHHHHHHhc--CCCCceEEEEeccCCCcccCCCCCCCCCHH-----------HC--CCCCCCC
Confidence 78999999999999888777766543 2222334443321 111111110000 00 1112233
Q ss_pred cccCCcchhhHHHHHHhCC-----CCCCCccchHHHHHHHH---hCCCEEEEeccC
Q 044519 264 GFNGTAGVWRIQAIEDAGG-----WKDRTTVEDMDLAVRAS---LKGWKFVFVGDL 311 (534)
Q Consensus 264 ~~~G~~~~~Rr~~l~~~Gg-----~~~~~~~ED~~l~~rl~---~~G~ki~~~~~~ 311 (534)
.++|.+.++.+++.+.+-. .-...-.||..++.-+. +.|.++.+..+.
T Consensus 540 YasG~gYVlS~Dla~~L~~~s~s~~l~~f~lEDVyvGi~l~~l~k~gl~v~~~~~~ 595 (636)
T PLN03133 540 WAHGPGYVVSRDIAKEVYKRHKEGRLKMFKLEDVAMGIWIAEMKKEGLEVKYENDG 595 (636)
T ss_pred CCCcCEEEEcHHHHHHHHHhhhhcccCcCChhhHhHHHHHHHhcccCCCceeeCCC
Confidence 4679999999999988621 11123379999999875 356666666543
No 186
>COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism]
Probab=53.13 E-value=1.2e+02 Score=27.68 Aligned_cols=53 Identities=9% Similarity=0.164 Sum_probs=41.1
Q ss_pred EEEEEecCCCC-CChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCC
Q 044519 162 VKYETRKNRNG-YKAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYLLENK 218 (534)
Q Consensus 162 v~~~~r~~~~g-~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~ 218 (534)
+.++. +...+ |--.++-.|+++. ++|+++++=+|+=. +++.+.++.+.+.+++
T Consensus 62 ~~vv~-D~~~~~GPL~Gi~~al~~~---~~~~~~v~~~D~P~i~~~lv~~l~~~~~~~~ 116 (192)
T COG0746 62 LPVVP-DELPGFGPLAGILAALRHF---GTEWVLVLPCDMPFIPPELVERLLSAFKQTG 116 (192)
T ss_pred Cceee-cCCCCCCCHHHHHHHHHhC---CCCeEEEEecCCCCCCHHHHHHHHHhhcccC
Confidence 44453 33333 6788899999998 89999999999665 9999999999885444
No 187
>TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase. Members of this protein family are 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, the IspD protein of the deoxyxylulose pathway of IPP biosynthesis. In about twenty percent of bacterial genomes, this protein occurs as IspDF, a bifunctional fusion protein.
Probab=51.06 E-value=1.6e+02 Score=27.20 Aligned_cols=42 Identities=24% Similarity=0.400 Sum_probs=32.5
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcC
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLEN 217 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 217 (534)
...++..|++.. .+.|+++++|+|. .++++.+.+++..+.++
T Consensus 77 ~~~sl~~~l~~~--~~~d~vlv~~~D~P~i~~~~i~~li~~~~~~ 119 (217)
T TIGR00453 77 RQDSVRNGLKAL--KDAEWVLVHDAARPFVPKELLDRLLEALRKA 119 (217)
T ss_pred HHHHHHHHHHhC--CCCCEEEEccCccCCCCHHHHHHHHHHHhhC
Confidence 446677777754 2578999999997 56999999999987444
No 188
>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=50.88 E-value=2e+02 Score=30.28 Aligned_cols=94 Identities=13% Similarity=0.073 Sum_probs=57.1
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|..+ ...++++++++.+.. -+++.+ ++.. .++ .+++... ..++.++..+ ...|-+
T Consensus 27 l~~i~g-kpli~~~i~~l~~~g--i~~i~v-v~~~-~~~------------~i~~~~~-----~~~~~~i~~~-~~~Gt~ 83 (456)
T PRK09451 27 LHTLAG-KPMVQHVIDAANELG--AQHVHL-VYGH-GGD------------LLKQTLA-----DEPLNWVLQA-EQLGTG 83 (456)
T ss_pred cceeCC-hhHHHHHHHHHHhcC--CCcEEE-EECC-CHH------------HHHHhhc-----cCCcEEEECC-CCCCcH
Confidence 355555 567888999887654 234444 4432 122 1222211 1245565433 334578
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHH
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYL 214 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~ 214 (534)
+++..+.+.. .+.|.++++++|. .+.++.+.++++..
T Consensus 84 ~al~~a~~~l--~~~~~vlV~~gD~P~i~~~~i~~l~~~~ 121 (456)
T PRK09451 84 HAMQQAAPFF--ADDEDILMLYGDVPLISVETLQRLRDAK 121 (456)
T ss_pred HHHHHHHHhh--ccCCcEEEEeCCcccCCHHHHHHHHHHh
Confidence 8888888764 2357899999997 56888899888765
No 189
>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form. Alternate name: dTDP-D-glucose synthase
Probab=49.50 E-value=1.4e+02 Score=30.14 Aligned_cols=97 Identities=14% Similarity=0.077 Sum_probs=54.8
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|.-+. ..+..+++++.+.. -.++.| +......+.. ++...+...-+.++.++..+. ..|-++
T Consensus 25 ~pv~g~-pli~~~l~~l~~~g--i~~i~v-v~~~~~~~~i------------~~~~~~~~~~~~~~~~~~~~~-~~G~~~ 87 (353)
T TIGR01208 25 IPVANK-PILQYAIEDLAEAG--ITDIGI-VVGPVTGEEI------------KEIVGEGERFGAKITYIVQGE-PLGLAH 87 (353)
T ss_pred cEECCE-eHHHHHHHHHHHCC--CCEEEE-EeCCCCHHHH------------HHHHhcccccCceEEEEECCC-CCCHHH
Confidence 455555 78999999998754 233333 3333122222 222222111234556654333 345888
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
++..+.+.. +.|-++++.+|...+. .+.+++..+
T Consensus 88 al~~a~~~l---~~~~~li~~gD~~~~~-~l~~l~~~~ 121 (353)
T TIGR01208 88 AVYTARDFL---GDDDFVVYLGDNLIQD-GISRFVKSF 121 (353)
T ss_pred HHHHHHHhc---CCCCEEEEECCeecCc-cHHHHHHHH
Confidence 888888765 3344556789988764 457777766
No 190
>PF02348 CTP_transf_3: Cytidylyltransferase; InterPro: IPR003329 Synonym(s): CMP-N-acetylneuraminic acid synthetase Acylneuraminate cytidylyltransferase (2.7.7.43 from EC) (CMP-NeuAc synthetase) catalyzes the reaction of CTP and NeuAc to form CMP-NeuAc, which is the nucleotide sugar donor used by sialyltransferases []. The outer membrane lipooligosaccharides of some microorganisms contain terminal sialic acid attached to N-acetyllactosamine and so this modification may be important in pathogenesis.; GO: 0009103 lipopolysaccharide biosynthetic process; PDB: 3K8D_C 1VH1_B 3K8E_C 1QWJ_A 3EWI_A 1VIC_B 3DUV_A 1VH3_C 3TQD_A 2Y6P_C ....
Probab=48.40 E-value=2.2e+02 Score=26.11 Aligned_cols=97 Identities=20% Similarity=0.172 Sum_probs=54.7
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
+....+..+++.+++....+ + |+|.-|+ +... +.++++ +..+ ..++.....-......
T Consensus 22 ~gkpLi~~~i~~a~~s~~~d-~--IvVaTd~--~~i~------------~~~~~~---g~~v--~~~~~~~~~~~~r~~~ 79 (217)
T PF02348_consen 22 GGKPLIEYVIERAKQSKLID-E--IVVATDD--EEID------------DIAEEY---GAKV--IFRRGSLADDTDRFIE 79 (217)
T ss_dssp TTEEHHHHHHHHHHHTTTTS-E--EEEEESS--HHHH------------HHHHHT---TSEE--EE--TTSSSHHHHHHH
T ss_pred CCccHHHHHHHHHHhCCCCC-e--EEEeCCC--HHHH------------HHHHHc---CCee--EEcChhhcCCcccHHH
Confidence 33468899999998877653 3 3344442 2222 223332 3444 3233222223334455
Q ss_pred HHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCCc
Q 044519 181 GLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYLLENKE 219 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~ 219 (534)
++++......|+++.+.+|+-+ +|+.+.+++..+.+++.
T Consensus 80 ~~~~~~~~~~~~vv~~~~d~Pll~~~~i~~~i~~~~~~~~ 119 (217)
T PF02348_consen 80 AIKHFLADDEDIVVRLQGDSPLLDPTSIDRAIEDIREANE 119 (217)
T ss_dssp HHHHHTCSTTSEEEEESTTETT--HHHHHHHHHHHHHSTT
T ss_pred HHHHhhhhHHhhccccCCeeeECCHHHHHHHHHHHhcCch
Confidence 6666511123399999999666 99999999999866544
No 191
>TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit. GalF is a non-catalytic subunit of the UTP-glucose pyrophosphorylase modulating the enzyme activity to increase the formation of UDP-glucose
Probab=46.47 E-value=2e+02 Score=28.37 Aligned_cols=113 Identities=13% Similarity=0.163 Sum_probs=59.5
Q ss_pred CCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHH--------HHHHHHHh---hc
Q 044519 90 YPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLV--------ELECLKWI---EK 158 (534)
Q Consensus 90 ~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v--------~~~~~~~~---~~ 158 (534)
.|+. ++|+-+.+ .+...++.+.+..- .++.| ++.. ..+... +.|.-..+.- ++..+... ..
T Consensus 24 ~PKp--LvpV~gkP-iI~~vl~~l~~~Gi--~~ivi-vv~~-~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (297)
T TIGR01105 24 IPKE--MLPIVDKP-MIQYIVDEIVAAGI--KEIVL-VTHA-SKNAVE-NHFDTSYELESLLEQRVKRQLLAEVQSICPP 95 (297)
T ss_pred CCce--eeEECCEE-HHHHHHHHHHHCCC--CEEEE-EecC-ChHHHH-HHHhchHHHHHHHHHhcchhhhhhhhhcCCC
Confidence 4544 67777765 88899999987653 23333 3332 222333 1110000000 00001110 11
Q ss_pred CccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCH-------HHHHHHHHHH
Q 044519 159 GVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDE-------DFLWRTIPYL 214 (534)
Q Consensus 159 ~~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~p-------d~L~~lv~~~ 214 (534)
+.++.+...+++. |-++|+..+.+.. .+.+++++. +|++.++ -.+.+++...
T Consensus 96 ~~~i~~~~q~~~l-Gtg~Av~~a~~~l--~~~~flvv~-gD~l~~~~~~~~~~~~l~~li~~~ 154 (297)
T TIGR01105 96 GVTIMNVRQAQPL-GLGHSILCARPVV--GDNPFVVVL-PDIIIDDATADPLRYNLAAMIARF 154 (297)
T ss_pred CceEEEeeCCCcC-chHHHHHHHHHHh--CCCCEEEEE-CCeeccccccccchhHHHHHHHHH
Confidence 3456676554444 5899999888875 234566555 8877754 3777888765
No 192
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=46.01 E-value=2.7e+02 Score=27.96 Aligned_cols=119 Identities=11% Similarity=0.064 Sum_probs=61.0
Q ss_pred CcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEEc-CCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 91 PMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVLD-DSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 91 P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~D-ds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
..+.|+..+=+.- ..+..+|.|++.-+ ++..+.+.|.+ +-+++..+ .+++.++++ +.++....-+
T Consensus 24 ~~i~Iv~~~D~ny~~~~~vsi~Sil~nn-~~~~~~f~Il~~~is~e~~~---------~l~~l~~~~---~~~i~~~~id 90 (334)
T PRK15171 24 NSLDIAYGIDKNFLFGCGVSIASVLLNN-PDKSLVFHVFTDYISDADKQ---------RFSALAKQY---NTRINIYLIN 90 (334)
T ss_pred CceeEEEECcHhhHHHHHHHHHHHHHhC-CCCCEEEEEEeCCCCHHHHH---------HHHHHHHhc---CCeEEEEEeC
Confidence 4677777663332 78899999998643 33345565564 44444444 555555544 3344443221
Q ss_pred C--CCC---CChhHHHHHHHh----hhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEE
Q 044519 169 N--RNG---YKAGALKEGLEK----QYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLV 223 (534)
Q Consensus 169 ~--~~g---~Ka~aln~gl~~----a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V 223 (534)
. ..+ .+......-.+. ....+.|-++.+|+|.++..| |.++...=..+..+++|
T Consensus 91 ~~~~~~~~~~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~d-l~~L~~~dl~~~~~aav 153 (334)
T PRK15171 91 CERLKSLPSTKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGS-IKELIDLDFAENEIAAV 153 (334)
T ss_pred HHHHhCCcccCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCC-HHHHHhccCCCCeEEEE
Confidence 1 000 111122222221 112368999999999988654 44444331132345554
No 193
>PF03360 Glyco_transf_43: Glycosyltransferase family 43; InterPro: IPR005027 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 43 GT43 from CAZY comprises enzymes with only one known activities; beta-glucuronyltransferase(2.4.1 from EC);.; GO: 0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, 0016020 membrane; PDB: 2D0J_B 3CU0_A 1FGG_B 1KWS_B 1V84_B 1V83_B 1V82_A.
Probab=43.73 E-value=49 Score=30.74 Aligned_cols=36 Identities=14% Similarity=-0.078 Sum_probs=24.0
Q ss_pred hhHHHHHHHhhh---c-cCCcEEEEecCCCCCCHHHHHHH
Q 044519 175 AGALKEGLEKQY---V-KDCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 175 a~aln~gl~~a~---~-~~~d~v~~lDaD~~~~pd~L~~l 210 (534)
...+|.|++... . ...-+|.|.|+|...+.+..+++
T Consensus 59 ~~qRn~AL~~ir~~~~~~~~GVVyFaDDdNtYdl~LF~em 98 (207)
T PF03360_consen 59 VHQRNAALRWIRNNANHRLDGVVYFADDDNTYDLRLFDEM 98 (207)
T ss_dssp HHHHHHHHHHHHSTTTSSS-EEEEE--TTSEE-HHHHHHH
T ss_pred HHHHHHHHHHHHhcccCCCCcEEEECCCCCeeeHHHHHHH
Confidence 447899998773 2 23457889999999998887773
No 194
>cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose. Prokaryotic UDP-Glucose Pyrophosphorylase (UGPase) catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans. UGPase is found in both prokaryotes and eukaryotes, although prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity.
Probab=41.93 E-value=1.8e+02 Score=27.87 Aligned_cols=52 Identities=15% Similarity=-0.031 Sum_probs=35.0
Q ss_pred ccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHH--HHHHHHHHHh
Q 044519 160 VNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDED--FLWRTIPYLL 215 (534)
Q Consensus 160 ~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd--~L~~lv~~~~ 215 (534)
.++.+...+.. .|-++++..+.+.. +.+-++++.+|.....+ .+.++++...
T Consensus 93 ~~i~~~~~~~~-~Gt~~al~~~~~~i---~~~~~lv~~gD~~~~~~~~~~~~l~~~~~ 146 (267)
T cd02541 93 ANIHYVRQKEP-LGLGHAVLCAKPFI---GDEPFAVLLGDDLIDSKEPCLKQLIEAYE 146 (267)
T ss_pred ceEEEEEcCCC-CChHHHHHHHHHHh---CCCceEEEECCeEEeCCchHHHHHHHHHH
Confidence 34555533333 34888999888876 44667777888776542 6888888763
No 195
>PRK00576 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=39.85 E-value=2.7e+02 Score=24.72 Aligned_cols=42 Identities=10% Similarity=0.011 Sum_probs=31.1
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHHH
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYL 214 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~ 214 (534)
|-..++-.|++.+...+.|+++++=+|.=. +++.+++++...
T Consensus 58 gpl~~~~~gl~~~~~~~~~~~lv~~~DmP~i~~~~i~~L~~~~ 100 (178)
T PRK00576 58 GPLPATGRGLRAAAEAGARLAFVCAVDMPYLTVELIDDLARPA 100 (178)
T ss_pred CcHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCHHHHHHHHHHh
Confidence 456666666765422367999999999655 999999998876
No 196
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=38.75 E-value=1.2e+02 Score=36.08 Aligned_cols=177 Identities=13% Similarity=0.120 Sum_probs=88.7
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHH------HHHHHHHhcCC----cEEEEeeeeEeecCCCchhhHh--
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFL------WRTIPYLLENK----ELGLVQARWKFVNADECLMTRL-- 240 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L------~~lv~~~~~~~----~v~~V~~~~~~~n~~~~~~~~~-- 240 (534)
||..|-|.++--. +||++-.+|+. ..+++ +.+++.|++.. .+.+++.+-.....+.+-+...
T Consensus 1051 GKpeNQNhaiiFt---RGE~iQtIDmN---QDnYlEE~lKmRnlL~EF~~~~~g~r~ptIlG~RE~IFt~svssLa~fms 1124 (1679)
T KOG0916|consen 1051 GKPENQNHAIIFT---RGEAIQTIDMN---QDNYLEEALKMRNLLQEFEELHLGIRPPTILGAREHIFTGSVSSLAWFMS 1124 (1679)
T ss_pred CCCcccCceeeee---cchhhheeccc---chHHHHHHHHHHHHHHHHHhhcCCCCCCceeeehhheecCCchHHHHHHc
Confidence 7999999999887 99999999987 23333 34556664432 3445555433333222222111
Q ss_pred -HhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCC----CCccchHHHHHHHHhCCCEEEEeccCcccc
Q 044519 241 -QEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKD----RTTVEDMDLAVRASLKGWKFVFVGDLGVKN 315 (534)
Q Consensus 241 -~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~----~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~ 315 (534)
|+-++ -...|+.-...+++-.--|.--++.|-....-||-+. -++.||..-++-...+|.++..+.-..|--
T Consensus 1125 ~qEqSF---vTlgqR~LA~p~~vr~HYGHPD~~drif~~TRGGvSKAsk~inlsEDIfAG~n~tlRgG~itH~EYiQvGK 1201 (1679)
T KOG0916|consen 1125 GQEQSF---VTLGQRTLANPGGVRLHYGHPDVFDRIFHITRGGVSKASKGINLSEDIFAGFNATLRGGNITHHEYIQVGK 1201 (1679)
T ss_pred cCccch---hhHHHHHhccccceeeecCCCcHhhhhhhhccccchHhhcccccchHhhhhhhHHhhCCCcccceeeeccc
Confidence 11110 0111111111111111123444444433333455543 357999999999999998887776444311
Q ss_pred cCCcCHHHHHHHHhhhccchh-hHHhhhhhhhhh-cCCCChhHHHHHH
Q 044519 316 ELPSTFKAYRYQQHRWSCGPS-NLFSKMTREIIL-CERVSVWKRLYLI 361 (534)
Q Consensus 316 ~~p~t~~~~~~Qr~RW~~G~~-~~~~~~~~~~~~-~~~~~~~~~~~~~ 361 (534)
.--..+.....=...-+.|+- |++.+ .+.+ ..++++.+.+.+.
T Consensus 1202 GRDvGlnqI~~FeaKia~G~GEQ~LSR---d~YrLG~~ldffRmLSfy 1246 (1679)
T KOG0916|consen 1202 GRDVGLNQISNFEAKIANGNGEQTLSR---DYYRLGTQLDFFRMLSFY 1246 (1679)
T ss_pred ccccCcchhhhhhhhhcCCCcchhhhH---HHHHhcccccHHHHHHHH
Confidence 111122222222334456665 44432 2221 2456666666543
No 197
>TIGR00454 conserved hypothetical protein TIGR00454. At this time this gene appears to be present only in Archea
Probab=38.43 E-value=2.5e+02 Score=25.33 Aligned_cols=95 Identities=8% Similarity=0.058 Sum_probs=55.5
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|.. ....+...++++.+.. -+++.| +....++.+.. .+ ++ .. ..+. . ..+.|-..
T Consensus 22 l~i~-GkplI~~vi~~l~~~~--i~~I~V-v~~~~~~~~~~---------~l----~~---~~--~~~~-~-~~g~G~~~ 77 (183)
T TIGR00454 22 IEVC-GRCLIDHVLSPLLKSK--VNNIII-ATSPHTPKTEE---------YI----NS---AY--KDYK-N-ASGKGYIE 77 (183)
T ss_pred eEEC-CEEHHHHHHHHHHhCC--CCEEEE-EeCCCHHHHHH---------HH----hh---cC--cEEE-e-cCCCCHHH
Confidence 3444 4578888888887654 233333 44433222221 22 21 11 1222 2 33334667
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcC
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLEN 217 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~ 217 (534)
.+..|++.. ...+.++++-+|.- ++++.+.++++.+.+.
T Consensus 78 ~l~~al~~~--~~~~~~lv~~~D~P~i~~~~i~~li~~~~~~ 117 (183)
T TIGR00454 78 DLNECIGEL--YFSEPFLVVSSDLINLRSKIIDSIVDYYYCI 117 (183)
T ss_pred HHHHHhhcc--cCCCCEEEEeCCcCcCCHHHHHHHHHHHHhc
Confidence 888888753 13578999999975 5999999999987443
No 198
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Probab=38.08 E-value=3.7e+02 Score=25.77 Aligned_cols=42 Identities=12% Similarity=0.122 Sum_probs=32.0
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCC-CCCCHHHHHHHHHHHhc
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDAD-FQPDEDFLWRTIPYLLE 216 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD-~~~~pd~L~~lv~~~~~ 216 (534)
..+.+..|++.. ..+.++|++.|+| -.++++.+.+++....+
T Consensus 103 r~~SV~~gl~~l-~~~~~~VlihDaarP~vs~~~i~~li~~~~~ 145 (252)
T PLN02728 103 RQDSVFNGLQEV-DANSELVCIHDSARPLVTSADIEKVLKDAAV 145 (252)
T ss_pred hHHHHHHHHHhc-cCCCCEEEEecCcCCCCCHHHHHHHHHHHhh
Confidence 466778888764 2356899999997 56699999999988743
No 199
>TIGR02584 cas_NE0113 CRISPR-associated protein, NE0113 family. Members of this minor CRISPR-associated (Cas) protein family are found in cas gene clusters in Vibrio vulnificus YJ016, Nitrosomonas europaea ATCC 19718, Mannheimia succiniciproducens MBEL55E, and Verrucomicrobium spinosum.
Probab=37.73 E-value=3.2e+02 Score=25.35 Aligned_cols=37 Identities=16% Similarity=0.136 Sum_probs=25.7
Q ss_pred EEEeccCch-HHHHHHHHHHHcCCCC--CCceEEEEEcCC
Q 044519 95 VQIPMYNEK-EVYKLSIGAACGLSWP--SDRLIVQVLDDS 131 (534)
Q Consensus 95 ViIP~yne~-~~l~~~L~sl~~q~yp--~~~~~I~V~Dds 131 (534)
|++.+-+.+ +++.+||.++..+..| .+++.|+-..++
T Consensus 1 ILvat~G~sPQVVTETLyaL~~~g~~~~pdEi~vItT~~g 40 (209)
T TIGR02584 1 ILLCVSGMSPQIITETIYALAQESPPVVPEEIHVITTSDG 40 (209)
T ss_pred CEEEecCCCCchHHHHHHHHHhcCCCCCCCeEEEEEccCc
Confidence 345555554 8999999999998877 677665333333
No 200
>KOG0799 consensus Branching enzyme [Carbohydrate transport and metabolism]
Probab=37.20 E-value=3.6e+02 Score=28.34 Aligned_cols=106 Identities=16% Similarity=0.119 Sum_probs=63.2
Q ss_pred cEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC
Q 044519 92 MVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR 170 (534)
Q Consensus 92 ~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~ 170 (534)
.+..+.-+|.+-+.+++.+.++-. |....-| .+|. |+++.-. .+++..+. -.||.+....+.
T Consensus 104 ~~a~~~~v~kd~~~verll~aiYh---PqN~yci-hvD~~s~~~fk~---------~~~~L~~c----f~NV~v~~k~~~ 166 (439)
T KOG0799|consen 104 PAAFLRVVYKDYEQVERLLQAIYH---PQNVYCI-HVDAKSPPEFRV---------AMQQLASC----FPNVIVLPKRES 166 (439)
T ss_pred ceEEEEeecccHHHHHHHHHHHhC---CcCcceE-EECCCCCHHHHH---------HHHHHHhc----CCceEEeccccc
Confidence 678888899998999998888844 3233334 4554 6654433 44444443 478888854433
Q ss_pred CCCChhHHHH----HHHhhhc--cCCcEEEEecCCCCC--CHHHHHHHHHHH
Q 044519 171 NGYKAGALKE----GLEKQYV--KDCQFVVIFDADFQP--DEDFLWRTIPYL 214 (534)
Q Consensus 171 ~g~Ka~aln~----gl~~a~~--~~~d~v~~lDaD~~~--~pd~L~~lv~~~ 214 (534)
.-.++.+++. +++.... .+-+|++.+-+.+.| ..+.+.+..+.+
T Consensus 167 v~~~G~s~l~a~l~c~~~Ll~~~~~W~yfinLs~~D~PlkT~~elv~i~~~L 218 (439)
T KOG0799|consen 167 VTYGGHSILAAHLNCLADLLKLSGDWDYFINLSNSDYPLKTNDELVRIFKIL 218 (439)
T ss_pred eecCCchhhHHHHHHHHHHHhcCCCCceeeeccCCCcccCCHHHHHHHHHHc
Confidence 3223333332 2222211 236888887666666 777777777777
No 201
>PF10138 vWA-TerF-like: vWA found in TerF C terminus ; InterPro: IPR019303 This entry represents the N-terminal domain of a family of proteins that confer resistance to the metalloid element tellurium and its salts.
Probab=36.85 E-value=2.8e+02 Score=25.66 Aligned_cols=101 Identities=17% Similarity=0.125 Sum_probs=51.4
Q ss_pred CchHHHHHHHHHHH---cCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhH
Q 044519 101 NEKEVYKLSIGAAC---GLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGA 177 (534)
Q Consensus 101 ne~~~l~~~L~sl~---~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~a 177 (534)
|+..++++.++... ..+.| .+++++.||..++..+ +++...+-...+.-.+.+.-.+.+-+--..
T Consensus 84 ~y~~vm~~v~~~y~~~~~~~~P--~~VlFiTDG~~~~~~~----------~~~~i~~as~~pifwqFVgiG~~~f~fL~k 151 (200)
T PF10138_consen 84 NYAPVMEDVLDHYFKREPSDAP--ALVLFITDGGPDDRRA----------IEKLIREASDEPIFWQFVGIGDSNFGFLEK 151 (200)
T ss_pred chHHHHHHHHHHHhhcCCCCCC--eEEEEEecCCccchHH----------HHHHHHhccCCCeeEEEEEecCCcchHHHH
Confidence 55588888888877 33444 4777788986554433 112222211223333334222222111111
Q ss_pred HHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 178 LKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 178 ln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
|.. ++-....+.+++.+=|-|.+.+...-.++++.|
T Consensus 152 LD~-l~gR~vDNa~Ff~~~d~~~lsD~eLy~~LL~Ef 187 (200)
T PF10138_consen 152 LDD-LAGRVVDNAGFFAIDDIDELSDEELYDRLLAEF 187 (200)
T ss_pred hhc-cCCcccCCcCeEecCCcccCCHHHHHHHHHHHH
Confidence 111 111112466777777777777777777777766
No 202
>TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase. Built to distinquish between the highly similar genes galU and galF
Probab=36.04 E-value=3.2e+02 Score=25.97 Aligned_cols=51 Identities=10% Similarity=-0.121 Sum_probs=32.6
Q ss_pred cEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCH--HHHHHHHHHHh
Q 044519 161 NVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDE--DFLWRTIPYLL 215 (534)
Q Consensus 161 ~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~p--d~L~~lv~~~~ 215 (534)
++.+... +...|-++++..+.+.. +.+-++++-+|..... +.+.++++...
T Consensus 94 ~i~~~~~-~~~~G~~~al~~~~~~~---~~~~~lv~~gD~~~~~~~~~~~~l~~~~~ 146 (260)
T TIGR01099 94 TIFYVRQ-KEQKGLGHAVLCAEPFV---GDEPFAVILGDDIVVSEEPALKQMIDLYE 146 (260)
T ss_pred eEEEEec-CCCCCHHHHHHHHHHhh---CCCCEEEEeccceecCCcHHHHHHHHHHH
Confidence 4555533 33345788888888765 4455677777776644 36788888763
No 203
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=35.96 E-value=1.2e+02 Score=27.33 Aligned_cols=38 Identities=16% Similarity=0.126 Sum_probs=22.8
Q ss_pred HhhcCccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCC
Q 044519 155 WIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDAD 199 (534)
Q Consensus 155 ~~~~~~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD 199 (534)
.++.+.++..+.- |+....|..--+.. +|.|....|++
T Consensus 132 l~~~~I~v~~Igi----G~~~~~L~~ia~~t---gG~~~~~~~~~ 169 (183)
T cd01453 132 LKKENIRVSVIGL----SAEMHICKEICKAT---NGTYKVILDET 169 (183)
T ss_pred HHHcCcEEEEEEe----chHHHHHHHHHHHh---CCeeEeeCCHH
Confidence 3345666666633 23444566655555 88999877754
No 204
>PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate []. The isoprenoid pathway is a well known target for anti-infective drug development [, ].; GO: 0003824 catalytic activity, 0008299 isoprenoid biosynthetic process; PDB: 1VGW_F 1VGZ_A 1W77_A 2YC3_A 2YCM_A 2YC5_A 1VGU_A 3N9W_B 1I52_A 1H3M_B ....
Probab=35.41 E-value=3.8e+02 Score=25.14 Aligned_cols=93 Identities=24% Similarity=0.278 Sum_probs=55.4
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
+....+..+++++.+...- ++ +|+|+....-+..+ ++++ + .++.++. . +.........
T Consensus 26 ~Gkpvl~~tl~~f~~~~~i-~~-Ivvv~~~~~~~~~~--------~~~~----~-----~~v~iv~-G--G~tR~~SV~n 83 (221)
T PF01128_consen 26 GGKPVLEYTLEAFLASPEI-DE-IVVVVPPEDIDYVE--------ELLS----K-----KKVKIVE-G--GATRQESVYN 83 (221)
T ss_dssp TTEEHHHHHHHHHHTTTTE-SE-EEEEESGGGHHHHH--------HHHH----H-----TTEEEEE-----SSHHHHHHH
T ss_pred CCeEeHHHHHHHHhcCCCC-Ce-EEEEecchhHHHHH--------Hhhc----C-----CCEEEec-C--ChhHHHHHHH
Confidence 4457899999999875432 23 34455443322222 2332 2 3455552 1 1124456778
Q ss_pred HHHhhhccCCcEEEEecCC-CCCCHHHHHHHHHHHhc
Q 044519 181 GLEKQYVKDCQFVVIFDAD-FQPDEDFLWRTIPYLLE 216 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD-~~~~pd~L~~lv~~~~~ 216 (534)
|++.. ..+.|+|++-|+= -.++++.+.+++..+.+
T Consensus 84 gL~~l-~~~~d~VlIHDaaRPfv~~~~i~~~i~~~~~ 119 (221)
T PF01128_consen 84 GLKAL-AEDCDIVLIHDAARPFVSPELIDRVIEAARE 119 (221)
T ss_dssp HHHCH-HCTSSEEEEEETTSTT--HHHHHHHHHHHHH
T ss_pred HHHHH-HcCCCEEEEEccccCCCCHHHHHHHHHHHHh
Confidence 88875 2345899999998 45699999999999854
No 205
>PRK14490 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional
Probab=33.55 E-value=2.8e+02 Score=28.27 Aligned_cols=50 Identities=14% Similarity=0.024 Sum_probs=35.5
Q ss_pred EEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHHH
Q 044519 162 VKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYL 214 (534)
Q Consensus 162 v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~ 214 (534)
+.++.......|-..++..|++++ +.+.++++=+|.-. +++.+++++...
T Consensus 234 v~~i~d~~~~~Gpl~gi~~al~~~---~~~~~lv~~~DmP~i~~~~i~~L~~~~ 284 (369)
T PRK14490 234 IPLITDSYLDIGPLGGLLSAQRHH---PDAAWLVVACDLPFLDEATLQQLVEGR 284 (369)
T ss_pred CcEEeCCCCCCCcHHHHHHHHHhC---CCCcEEEEeCCcCCCCHHHHHHHHHhc
Confidence 445533333335667788888876 67788899999655 999999998875
No 206
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=33.50 E-value=75 Score=33.70 Aligned_cols=94 Identities=18% Similarity=0.215 Sum_probs=60.8
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR 170 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~ 170 (534)
...+|++-+|..++++...|+.+-.+.|-+ ++ |+|=++..|+... + .|++-+..+.+++.+++
T Consensus 649 EQFTvVmLTYERe~VLm~sLeRL~gLPYLn-Kv-vVVWNspk~P~dd---------l------~WPdigvPv~viR~~~N 711 (907)
T KOG2264|consen 649 EQFTVVMLTYEREAVLMGSLERLHGLPYLN-KV-VVVWNSPKDPPDD---------L------TWPDIGVPVEVIRVAEN 711 (907)
T ss_pred ceEEEEEEEehHHHHHHHHHHHhhCCcccc-eE-EEEeCCCCCChhc---------c------cCcCCCCceEEEEcccc
Confidence 368999999999999999999999998875 33 3233444343322 2 35667888888844332
Q ss_pred CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHH
Q 044519 171 NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFL 207 (534)
Q Consensus 171 ~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L 207 (534)
+- .|+-.-.+.. ..|-|+-+|+|.-+.-|-+
T Consensus 712 sL---NNRFlPwd~I---ETEAvLS~DDDahLrhdEI 742 (907)
T KOG2264|consen 712 SL---NNRFLPWDRI---ETEAVLSLDDDAHLRHDEI 742 (907)
T ss_pred cc---cccccCchhh---hheeeeecccchhhhhhhe
Confidence 21 1111223444 7899999999965544433
No 207
>COG1861 SpsF Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog [Cell envelope biogenesis, outer membrane]
Probab=33.38 E-value=3.9e+02 Score=25.18 Aligned_cols=97 Identities=18% Similarity=0.198 Sum_probs=60.4
Q ss_pred EEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCC
Q 044519 95 VQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYK 174 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~K 174 (534)
++.|.-.| ..|..+|+.+.+..+- ++++|--.|..+|+ .++..|.+ +|. .+. | |.-
T Consensus 21 vLlpL~~~-pmI~~~lervrks~~~-d~ivvATS~~~~d~------------~l~~~~~~---~G~--~vf-r----Gs~ 76 (241)
T COG1861 21 VLLPLGGE-PMIEYQLERVRKSKDL-DKIVVATSDKEEDD------------ALEEVCRS---HGF--YVF-R----GSE 76 (241)
T ss_pred hhhhcCCC-chHHHHHHHHhccccc-cceEEEecCCcchh------------HHHHHHHH---cCe--eEe-c----CCH
Confidence 45566554 4678899999887764 34444333444443 44456654 243 333 2 223
Q ss_pred hhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHHHh
Q 044519 175 AGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYLL 215 (534)
Q Consensus 175 a~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~ 215 (534)
..-+..-...+...+++.|+-+-+|+-+ +|+.+..++....
T Consensus 77 ~dVL~Rf~~a~~a~~~~~VVRvTGD~P~~dp~l~d~~v~~~l 118 (241)
T COG1861 77 EDVLQRFIIAIKAYSADVVVRVTGDNPFLDPELVDAAVDRHL 118 (241)
T ss_pred HHHHHHHHHHHHhcCCCeEEEeeCCCCCCCHHHHHHHHHHHH
Confidence 4455555555444588999999999766 9999999887663
No 208
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=32.60 E-value=5.5e+02 Score=26.66 Aligned_cols=111 Identities=18% Similarity=0.151 Sum_probs=68.1
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
.+-|.|=+--...+|...+...++.+.+ +||+-. +++.-. |+-..+ .+++. + .....+.|..-
T Consensus 47 ~~~p~vWiHaaSVGEv~a~~pLv~~l~~-~~P~~~--ilvTt~-T~Tg~e---------~a~~~---~-~~~v~h~YlP~ 109 (419)
T COG1519 47 PEGPLVWIHAASVGEVLAALPLVRALRE-RFPDLR--ILVTTM-TPTGAE---------RAAAL---F-GDSVIHQYLPL 109 (419)
T ss_pred CCCCeEEEEecchhHHHHHHHHHHHHHH-hCCCCC--EEEEec-CccHHH---------HHHHH---c-CCCeEEEecCc
Confidence 3457788888889998888888888764 678754 423332 222222 33322 2 12245566644
Q ss_pred cCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeE
Q 044519 168 KNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWK 228 (534)
Q Consensus 168 ~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~ 228 (534)
+ ...+.+..++.. +.+..+++.++.+| +.+.++-+ ..-....|.++..
T Consensus 110 D-----~~~~v~rFl~~~---~P~l~Ii~EtElWP--nli~e~~~---~~~p~~LvNaRLS 157 (419)
T COG1519 110 D-----LPIAVRRFLRKW---RPKLLIIMETELWP--NLINELKR---RGIPLVLVNARLS 157 (419)
T ss_pred C-----chHHHHHHHHhc---CCCEEEEEeccccH--HHHHHHHH---cCCCEEEEeeeec
Confidence 4 455889999887 99999999999885 33433321 2334556666543
No 209
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=32.03 E-value=3.8e+02 Score=25.27 Aligned_cols=16 Identities=31% Similarity=0.264 Sum_probs=13.7
Q ss_pred CCcEEEEecCCCCCCH
Q 044519 189 DCQFVVIFDADFQPDE 204 (534)
Q Consensus 189 ~~d~v~~lDaD~~~~p 204 (534)
+.|-++.+|+|.++-.
T Consensus 95 ~~~rvlylD~D~lv~~ 110 (248)
T cd04194 95 DYDKVLYLDADIIVLG 110 (248)
T ss_pred ccCEEEEEeCCEEecC
Confidence 6899999999988744
No 210
>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism]
Probab=31.88 E-value=5.5e+02 Score=25.95 Aligned_cols=121 Identities=18% Similarity=0.043 Sum_probs=72.1
Q ss_pred HHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecC-CCchhhHhHhhhcccchhhhhhcc
Q 044519 178 LKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNA-DECLMTRLQEMSLDYHFSVEQEVG 256 (534)
Q Consensus 178 ln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~-~~~~~~~~~~~~~~~~~~~~~~~~ 256 (534)
+..+-..+ .+.++|+-.|+|+.+.++.|.+.+..- .+|.-....|....... ....-.++ +..+.. -
T Consensus 178 l~w~~~~c--p~akfi~K~DDDvfv~~~~L~~~L~~~-~~~~~~~~~G~v~~~~~p~R~~~~Kw--------yVp~~~-y 245 (349)
T KOG2287|consen 178 LLWGVSKC--PDAKFILKIDDDVFVNPDNLLEYLDKL-NDPSSDLYYGRVIQNAPPIRDKTSKW--------YVPESE-Y 245 (349)
T ss_pred HHHHHhcC--CcceEEEeccCceEEcHHHHHHHHhcc-CCCCcceEEEeecccCCCCCCCCCCC--------ccCHHH-C
Confidence 34555433 479999999999999999888877765 26776777776543211 00000010 000000 0
Q ss_pred cccCccccccCCcchhhHHHHHHhCC---CCCCCccchHHHHHHHHhC-CCEEEEecc
Q 044519 257 SSTCQFFGFNGTAGVWRIQAIEDAGG---WKDRTTVEDMDLAVRASLK-GWKFVFVGD 310 (534)
Q Consensus 257 ~~~~~~~~~~G~~~~~Rr~~l~~~Gg---~~~~~~~ED~~l~~rl~~~-G~ki~~~~~ 310 (534)
........++|.+.++.+++.+.+-. .....-.||.-++.-+.+. |.+-...+.
T Consensus 246 ~~~~YP~Y~sG~gYvis~~~a~~l~~~s~~~~~~~iEDV~~g~~l~~~~gi~~~~~~~ 303 (349)
T KOG2287|consen 246 PCSVYPPYASGPGYVISGDAARRLLKASKHLKFFPIEDVFVGGCLAEDLGIKPVNHPG 303 (349)
T ss_pred CCCCCCCcCCCceeEecHHHHHHHHHHhcCCCccchHHHHHHHHHHHhcCCCcccCcc
Confidence 01122333689999999998777532 2222337999999999887 765544443
No 211
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=31.35 E-value=3.7e+02 Score=23.69 Aligned_cols=86 Identities=13% Similarity=0.165 Sum_probs=44.3
Q ss_pred eEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHHHHhh------hccCCcEEEEe
Q 044519 123 LIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQ------YVKDCQFVVIF 196 (534)
Q Consensus 123 ~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~gl~~a------~~~~~d~v~~l 196 (534)
+.|+++-.-.++-.+ +.++++.++.. +..++..+.-.+....++.......+.- ...++++++.+
T Consensus 3 i~i~~vGk~k~~~~~--------~~~~eY~kRl~-~~~~~e~~e~~~~~~~~~~~~~~~~~~E~~~il~~i~~~~~~i~L 73 (155)
T PF02590_consen 3 IRIIAVGKLKEKFLK--------ELIEEYLKRLS-RYAKLEIIELKEEKIAKAQSIEKIKEKEGERILKKIPPNDYVILL 73 (155)
T ss_dssp EEEEEESSS-SHHHH--------HHHHHHHHHHC-TTSEEEEEEE------TCHHHHHHHHHHHHHHHCTSHTTSEEEEE
T ss_pred EEEEEEeccCcHHHH--------HHHHHHHHHcC-ccCceeEEEeccccccccccHHHHHHHHHHHHHhhccCCCEEEEE
Confidence 455444444444444 57778877763 3445655544333323444444333310 11479999999
Q ss_pred cCCC-CCCHHHHHHHHHHHhcC
Q 044519 197 DADF-QPDEDFLWRTIPYLLEN 217 (534)
Q Consensus 197 DaD~-~~~pd~L~~lv~~~~~~ 217 (534)
|.+- .++...+.+.+.....+
T Consensus 74 d~~Gk~~sS~~fA~~l~~~~~~ 95 (155)
T PF02590_consen 74 DERGKQLSSEEFAKKLERWMNQ 95 (155)
T ss_dssp -TTSEE--HHHHHHHHHHHHHT
T ss_pred cCCCccCChHHHHHHHHHHHhc
Confidence 9884 44777777777765343
No 212
>PF14979 TMEM52: Transmembrane 52
Probab=30.49 E-value=1.3e+02 Score=26.00 Aligned_cols=33 Identities=6% Similarity=0.133 Sum_probs=25.5
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHHcCCCCCC
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSD 121 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~ 121 (534)
..++..+-+-..+.++.+..|+.|..+-.||..
T Consensus 60 ~~~P~~~TVia~D~DSt~hsTvTS~sSVq~P~~ 92 (154)
T PF14979_consen 60 APQPYEVTVIAVDSDSTLHSTVTSYSSVQYPAG 92 (154)
T ss_pred CCCCceEEEEeccCCccccchhhhhhccccccc
Confidence 345566666667777889999999999999864
No 213
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=29.11 E-value=4.1e+02 Score=27.47 Aligned_cols=90 Identities=22% Similarity=0.221 Sum_probs=49.3
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC-CCCCh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR-NGYKA 175 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~-~g~Ka 175 (534)
+|+-+ .+.+..+++++.+.. .++.| ++ +..++..+ +...+ ...+++++..++. ..|.+
T Consensus 25 lpi~g-kPli~~~i~~l~~~~---~~i~I-vv-~~~~~~i~------------~~~~~---~~~~v~~~~~~~~~~~gt~ 83 (430)
T PRK14359 25 HTICG-KPMLFYILKEAFAIS---DDVHV-VL-HHQKERIK------------EAVLE---YFPGVIFHTQDLENYPGTG 83 (430)
T ss_pred CEECC-ccHHHHHHHHHHHcC---CcEEE-EE-CCCHHHHH------------HHHHh---cCCceEEEEecCccCCCcH
Confidence 45544 567888888887641 34444 33 22232222 22222 1234556543322 23466
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHH
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIP 212 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~ 212 (534)
+++... + ...|.++++++|. ...++.++++.+
T Consensus 84 ~al~~~-~----~~~d~vlv~~gD~p~~~~~~l~~l~~ 116 (430)
T PRK14359 84 GALMGI-E----PKHERVLILNGDMPLVEKDELEKLLE 116 (430)
T ss_pred HHHhhc-c----cCCCeEEEEECCccCCCHHHHHHHHh
Confidence 666541 1 2568999999998 457888877653
No 214
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=27.32 E-value=85 Score=29.37 Aligned_cols=17 Identities=24% Similarity=0.176 Sum_probs=13.8
Q ss_pred cCCcEEEEecCCCCCCH
Q 044519 188 KDCQFVVIFDADFQPDE 204 (534)
Q Consensus 188 ~~~d~v~~lDaD~~~~p 204 (534)
.+.|-++.+|+|+++-.
T Consensus 97 ~~~drilyLD~D~lv~~ 113 (250)
T PF01501_consen 97 PDYDRILYLDADTLVLG 113 (250)
T ss_dssp TTSSEEEEE-TTEEESS
T ss_pred hhcCeEEEEcCCeeeec
Confidence 48999999999998844
No 215
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=26.75 E-value=2e+02 Score=30.56 Aligned_cols=110 Identities=16% Similarity=0.120 Sum_probs=64.3
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
.+....|.++-+||.-+.+...+....+ -|.-+-+++|=++ ...+..+ ..+.. -...+++.
T Consensus 440 ~~~qgFTlim~TYdR~d~L~k~v~~ys~--vPsL~kIlVVWNnq~k~PP~e---------s~~~~------~~VPlr~r- 501 (691)
T KOG1022|consen 440 GHSQGFTLIMLTYDRVDLLKKLVKHYSR--VPSLKKILVVWNNQGKNPPPE---------SLEPD------IAVPLRFR- 501 (691)
T ss_pred CcccceeeeeehHHHHHHHHHHHHHHhh--CCCcceEEEEecCCCCCCChh---------hcccc------CCccEEEE-
Confidence 3455789999999987888888877754 4443333324343 2222111 21111 11333333
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcE
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKEL 220 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v 220 (534)
+. |...||.=++---.-+.|-|+-+|+|.+.+-|-|....+.-.+.|+-
T Consensus 502 ~q-----keNsLnNRF~~~peieT~AVL~IDDDIim~~ddldFgf~VWrefPD~ 550 (691)
T KOG1022|consen 502 QQ-----KENSLNNRFEPYPEIETEAVLEIDDDIIMPCDDLDFGFEVWREFPDR 550 (691)
T ss_pred eh-----hhhhhhcccccCcccccceeEEecCceeeecchhHHHHHHHHhCccc
Confidence 11 33344443332212288999999999999888888877777666763
No 216
>COG2068 Uncharacterized MobA-related protein [General function prediction only]
Probab=25.81 E-value=5.3e+02 Score=23.78 Aligned_cols=95 Identities=20% Similarity=0.147 Sum_probs=62.7
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
+....+..+++..++-.+ ++ |+|+-+.... + ..+.. ..+.+++++..++...|-+..+..
T Consensus 29 ~g~plv~~~~~~a~~a~~--~~--vivV~g~~~~--~---------~~~a~-----~~~~~~~~v~npd~~~Gls~Sl~a 88 (199)
T COG2068 29 DGKPLVRASAETALSAGL--DR--VIVVTGHRVA--E---------AVEAL-----LAQLGVTVVVNPDYAQGLSTSLKA 88 (199)
T ss_pred CCCcHHHHHHHHHHhcCC--Ce--EEEEeCcchh--h---------HHHhh-----hccCCeEEEeCcchhhhHhHHHHH
Confidence 444577888887776443 23 3355553321 1 22222 124567777666666679999999
Q ss_pred HHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhc
Q 044519 181 GLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLE 216 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~ 216 (534)
|++++.. .+|.++++=+|.= +.|+.+.+++..+.+
T Consensus 89 g~~a~~~-~~~~v~~~lgDmP~V~~~t~~rl~~~~~~ 124 (199)
T COG2068 89 GLRAADA-EGDGVVLMLGDMPQVTPATVRRLIAAFRA 124 (199)
T ss_pred HHHhccc-CCCeEEEEeCCCCCCCHHHHHHHHHhccc
Confidence 9999821 2259999999965 799999999999843
No 217
>PF09837 DUF2064: Uncharacterized protein conserved in bacteria (DUF2064); InterPro: IPR018641 This entry contains proteins that have no known function. ; PDB: 3CGX_A.
Probab=24.57 E-value=4.2e+02 Score=22.15 Aligned_cols=61 Identities=13% Similarity=0.187 Sum_probs=37.7
Q ss_pred ccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHHHhcCCcEEEEeee
Q 044519 160 VNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYLLENKELGLVQAR 226 (534)
Q Consensus 160 ~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~v~~V~~~ 226 (534)
..+.+. .+..+.-..-++.+++++ ...++-|+++.+|+-- +++.|.+..+.+. +. ++|-|+
T Consensus 33 ~~~~~~--~Q~g~dLG~Rm~~a~~~~-~~g~~~vvliGsD~P~l~~~~l~~A~~~L~-~~--d~VlgP 94 (122)
T PF09837_consen 33 SGFSFF--PQQGGDLGERMANAFQQA-ARGYEPVVLIGSDCPDLTPDDLEQAFEALQ-RH--DVVLGP 94 (122)
T ss_dssp TTSEEE--E--SSSHHHHHHHHHHHH-HTT-SEEEEE-SS-TT--HHHHHHHHHHTT-T---SEEEEE
T ss_pred CCCEEe--ecCCCCHHHHHHHHHHHH-HcCCCcEEEEcCCCCCCCHHHHHHHHHHhc-cC--CEEEee
Confidence 334444 234444555677777776 6688899999999654 9999999999983 33 455555
No 218
>PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional
Probab=24.45 E-value=4.3e+02 Score=27.25 Aligned_cols=103 Identities=17% Similarity=0.238 Sum_probs=55.6
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe---cC---
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR---KN--- 169 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r---~~--- 169 (534)
++|.-|....|+..|+++.+.... ++.| ++... .+... +-+. +.|...+....++.. .+
T Consensus 30 llPv~gk~plI~~~L~~l~~~Gi~--~i~i-v~~~~-~~~i~--------~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 94 (407)
T PRK00844 30 AVPFGGSYRLIDFVLSNLVNSGYL--RIYV-LTQYK-SHSLD--------RHIS---QTWRLSGLLGNYITPVPAQQRLG 94 (407)
T ss_pred ceeeCCcceEhHHHHHHHHHCCCC--EEEE-EeccC-HHHHH--------HHHH---hCcCccccCCCeEEECCcccCCC
Confidence 577777657888999999886532 3333 44332 22222 1221 112111122233321 11
Q ss_pred --CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 170 --RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 170 --~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
...|-++|+..+.+.......|+++++.+|.+.+.| +.++++..
T Consensus 95 ~~~~lGta~al~~a~~~i~~~~~~~~lv~~gD~v~~~d-l~~l~~~h 140 (407)
T PRK00844 95 KRWYLGSADAIYQSLNLIEDEDPDYVVVFGADHVYRMD-PRQMVDFH 140 (407)
T ss_pred CCcccCCHHHHHHHHHHHHhcCCCEEEEecCCEEEcCC-HHHHHHHH
Confidence 124578888888776522234789999999877654 45566654
No 219
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=22.95 E-value=6.7e+02 Score=23.91 Aligned_cols=95 Identities=11% Similarity=0.062 Sum_probs=49.8
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC-----C-CCCCh
Q 044519 103 KEVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN-----R-NGYKA 175 (534)
Q Consensus 103 ~~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~-----~-~g~Ka 175 (534)
...+..++.|++.-+ . ..+.++|.++ -+++..+ .+++.++++ +..+..+.-+. . ...+.
T Consensus 13 ~~~~~v~l~Sll~nn-~-~~~~fyil~~~is~e~~~---------~l~~~~~~~---~~~i~~i~i~~~~~~~~~~~~~~ 78 (248)
T cd06432 13 ERFLRIMMLSVMKNT-K-SPVKFWFIKNFLSPQFKE---------FLPEMAKEY---GFEYELVTYKWPRWLHKQTEKQR 78 (248)
T ss_pred HHHHHHHHHHHHHcC-C-CCEEEEEEeCCCCHHHHH---------HHHHHHHHh---CCceEEEEecChhhhhcccccch
Confidence 367888999998764 2 3466666655 4443333 555665554 34444443220 0 01111
Q ss_pred --hHHH-HHHHhhhccCCcEEEEecCCCCCCHHHHHHHHH
Q 044519 176 --GALK-EGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIP 212 (534)
Q Consensus 176 --~aln-~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~ 212 (534)
.+.. ..+......+-|-++.+|+|.++.. -|+++..
T Consensus 79 ~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~-dL~eL~~ 117 (248)
T cd06432 79 IIWGYKILFLDVLFPLNVDKVIFVDADQIVRT-DLKELMD 117 (248)
T ss_pred hHHHHHHHHHHHhhhhccCEEEEEcCCceecc-cHHHHHh
Confidence 1111 1111111235799999999998764 3555554
No 220
>PF09623 Cas_NE0113: CRISPR-associated protein NE0113 (Cas_NE0113); InterPro: IPR019092 Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) are a family of DNA direct repeats separated by regularly sized non-repetitive spacer sequences that are found in most bacterial and archaeal genomes []. CRISPRs appear to provide acquired resistance against bacteriophages, possibly acting with an RNA interference-like mechanism to inhibit gene functions of invasive DNA elements [, ]. Differences in the number and type of spacers between CRISPR repeats correlate with phage sensitivity. It is thought that following phage infection, bacteria integrate new spacers derived from phage genomic sequences, and that the removal or addition of particular spacers modifies the phage-resistance phenotype of the cell. Therefore, the specificity of CRISPRs may be determined by spacer-phage sequence similarity. In addition, there are many protein families known as CRISPR-associated sequences (Cas), which are encoded in the vicinity of CRISPR loci []. CRISPR/cas gene regions can be quite large, with up to 20 different, tandem-arranged cas genes next to a CRISPR cluster or filling the region between two repeat clusters. Cas genes and CRISPRs are found on mobile genetic elements such as plasmids, and have undergone extensive horizontal transfer. Cas proteins are thought to be involved in the propagation and functioning of CRISPRs. Some Cas proteins show similarity to helicases and repair proteins, although the functions of most are unknown. Cas families can be divided into subtypes according to operon organisation and phylogeny. This entry represents a Cas protein family found in both bacteria and arachaea. The function of these proteins is unknown.
Probab=22.90 E-value=2.4e+02 Score=26.64 Aligned_cols=33 Identities=12% Similarity=0.025 Sum_probs=26.3
Q ss_pred EEEEeccCch-HHHHHHHHHHHcCCCCCCceEEE
Q 044519 94 LVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQ 126 (534)
Q Consensus 94 sViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~ 126 (534)
.|+|.+-+.. .++.+++.++.++.++.+++.|+
T Consensus 3 ~iLlatlG~sPqVVTETL~aL~~~g~~p~EV~vi 36 (224)
T PF09623_consen 3 NILLATLGTSPQVVTETLYALAQQGEIPDEVHVI 36 (224)
T ss_pred eEEEEecCCCchHHHHHHHHHHcCCCCCCEEEEE
Confidence 4667777775 89999999999998877776663
No 221
>TIGR02091 glgC glucose-1-phosphate adenylyltransferase. This enzyme, glucose-1-phosphate adenylyltransferase, is also called ADP-glucose pyrophosphorylase. The plant form is an alpha2,beta2 heterodimer, allosterically regulated in plants. Both subunits are homologous and included in this model. In bacteria, both homomeric forms of GlgC and more active heterodimers of GlgC and GlgD have been described. This model describes the GlgC subunit only. This enzyme appears in variants of glycogen synthesis pathways that use ADP-glucose, rather than UDP-glucose as in animals.
Probab=22.85 E-value=2.5e+02 Score=28.28 Aligned_cols=42 Identities=21% Similarity=0.208 Sum_probs=29.5
Q ss_pred CCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 172 GYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 172 g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
.|-++++..+++.......|.++++.+|.+.+.+ +.+++...
T Consensus 93 ~Gt~~al~~a~~~~~~~~~~~~lv~~gD~l~~~~-l~~~l~~~ 134 (361)
T TIGR02091 93 QGTADAVYQNLDLIEDYDPEYVLILSGDHIYKMD-YEKMLDYH 134 (361)
T ss_pred cCcHHHHHHHHHHHHhcCCCEEEEecCCEEEcCC-HHHHHHHH
Confidence 3578888888877522235789999999987665 55666654
No 222
>PRK00560 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=22.24 E-value=5.7e+02 Score=23.15 Aligned_cols=36 Identities=3% Similarity=-0.107 Sum_probs=27.2
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHH
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTI 211 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv 211 (534)
|--.++..+++.. +.|+++++=+|.-. +++.++++.
T Consensus 77 gpl~gi~~~l~~~---~~~~vlv~~~D~P~i~~~~i~~l~ 113 (196)
T PRK00560 77 SPLFGIINAFLTL---QTPEIFFISVDTPFVSFESIKKLC 113 (196)
T ss_pred CcHHHHHHHHHhc---CCCeEEEEecCcCcCCHHHHHHHH
Confidence 3444566666655 78999999999855 999998884
No 223
>COG1158 Rho Transcription termination factor [Transcription]
Probab=21.57 E-value=5.7e+02 Score=25.84 Aligned_cols=44 Identities=27% Similarity=0.329 Sum_probs=32.1
Q ss_pred EEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhc
Q 044519 94 LVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLR 137 (534)
Q Consensus 94 sViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~ 137 (534)
-|+-|-.-....+-+.|......++|..+++|+.+|..+++-++
T Consensus 177 LIVAPPkaGKT~lLq~IA~aIt~N~Pe~~LiVLLIDERPEEVTd 220 (422)
T COG1158 177 LIVAPPKAGKTTLLQNIANAITTNHPECELIVLLIDERPEEVTD 220 (422)
T ss_pred eEecCCCCCchHHHHHHHHHHhcCCCceEEEEEEecCCchHHHH
Confidence 35556666667778888888888999888888788886655444
No 224
>PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional
Probab=21.07 E-value=3.5e+02 Score=27.46 Aligned_cols=109 Identities=14% Similarity=0.189 Sum_probs=56.2
Q ss_pred CCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhc--CccEE----
Q 044519 90 YPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEK--GVNVK---- 163 (534)
Q Consensus 90 ~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~--~~~v~---- 163 (534)
.|+. ++|.-+....|+.+|+++.+... +++.| +. +...+..+ +.+.+ ..+|.-. ..++.
T Consensus 24 ~PK~--llpv~gk~pli~~~l~~l~~~Gi--~~i~i-v~-~~~~~~i~--------~~~~~-~~~~~~~~~~~~~~i~~~ 88 (380)
T PRK05293 24 IAKP--AVPFGGKYRIIDFTLSNCANSGI--DTVGV-LT-QYQPLELN--------NHIGI-GSPWDLDRINGGVTILPP 88 (380)
T ss_pred Cccc--eeeeCCceeehhHHHHHHHhCCC--CEEEE-Ee-cCCHHHHH--------HHHhC-CCcccccCCCCCEEEeCC
Confidence 4544 57777765688999999987543 23333 44 32222222 11110 0111100 01122
Q ss_pred EEEecCC--CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 164 YETRKNR--NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 164 ~~~r~~~--~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
+....++ ..|-++|+..+.+.....+.|.++++.+|.+.+.|.. +++...
T Consensus 89 ~~~~~~~~~~~Gta~al~~a~~~l~~~~~~~~lV~~gD~l~~~d~~-~ll~~h 140 (380)
T PRK05293 89 YSESEGGKWYKGTAHAIYQNIDYIDQYDPEYVLILSGDHIYKMDYD-KMLDYH 140 (380)
T ss_pred cccCCCCcccCCcHHHHHHHHHHHHhCCCCEEEEecCCEEEcCCHH-HHHHHH
Confidence 2222221 1347888888877651112478999999998766644 555543
No 225
>PF11181 YflT: Heat induced stress protein YflT
Probab=20.87 E-value=1.7e+02 Score=23.68 Aligned_cols=30 Identities=20% Similarity=0.269 Sum_probs=24.9
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEE
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIV 125 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I 125 (534)
+|=+|+.++.+...|+.+.++.|..+++.|
T Consensus 2 ~Igv~~~~~E~~~~I~~L~~~Gy~~ddI~V 31 (103)
T PF11181_consen 2 VIGVYDNEEEALSAIEELKAQGYSEDDIYV 31 (103)
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCcccEEE
Confidence 355677778888999999999999988666
No 226
>cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity. N-terminal domain of eEIF-2B epsilon and gamma, subunits of eukaryotic translation initiators, is a subfamily of glycosyltranferase 2 and is predicted to have glycosyltranferase activity. eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit epsilon shares sequence similarity with gamma subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.
Probab=20.63 E-value=5.8e+02 Score=23.45 Aligned_cols=99 Identities=11% Similarity=0.101 Sum_probs=49.3
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE-ecCCCCCC
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET-RKNRNGYK 174 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~-r~~~~g~K 174 (534)
++|+-|. ..+..+++.+.+... .++.| |+....+...+ .+.+....++ ..+..+.+.. ......|-
T Consensus 25 llpv~g~-pli~~~l~~l~~~gi--~~i~v-v~~~~~~~~~~--------~~~~~~~~~~-~~~~~v~~~~~~~~~~~Gt 91 (216)
T cd02507 25 LLPVANV-PLIDYTLEWLEKAGV--EEVFV-VCCEHSQAIIE--------HLLKSKWSSL-SSKMIVDVITSDLCESAGD 91 (216)
T ss_pred cceECCE-EHHHHHHHHHHHCCC--CeEEE-EeCCcHHHHHH--------HHHhcccccc-cCCceEEEEEccCCCCCcc
Confidence 4577665 788889998887542 23444 44332222222 1111100000 0112232222 22233346
Q ss_pred hhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHH
Q 044519 175 AGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIP 212 (534)
Q Consensus 175 a~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~ 212 (534)
+.++..+.+.. +.| ++++.+|.+.+.+ +..++.
T Consensus 92 a~~l~~~~~~i---~~d-flv~~gD~i~~~~-l~~~l~ 124 (216)
T cd02507 92 ALRLRDIRGLI---RSD-FLLLSCDLVSNIP-LSELLE 124 (216)
T ss_pred HHHHHHHhhcC---CCC-EEEEeCCEeecCC-HHHHHH
Confidence 77777766654 445 6789999887666 444553
No 227
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=20.30 E-value=4.2e+02 Score=26.24 Aligned_cols=84 Identities=18% Similarity=0.236 Sum_probs=51.7
Q ss_pred EEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHH
Q 044519 126 QVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDED 205 (534)
Q Consensus 126 ~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd 205 (534)
-|+.|.+|.-=+ +++++++.+|.++..+.|.+ .|-.+...-++.- .+-=+-++..|+-=+..
T Consensus 52 AVVTGaTDGIGK------------ayA~eLAkrG~nvvLIsRt~---~KL~~v~kEI~~~---~~vev~~i~~Dft~~~~ 113 (312)
T KOG1014|consen 52 AVVTGATDGIGK------------AYARELAKRGFNVVLISRTQ---EKLEAVAKEIEEK---YKVEVRIIAIDFTKGDE 113 (312)
T ss_pred EEEECCCCcchH------------HHHHHHHHcCCEEEEEeCCH---HHHHHHHHHHHHH---hCcEEEEEEEecCCCch
Confidence 478888887444 55566667899998887643 2666766666553 22234455666554333
Q ss_pred HHHHHHHHHhcCCcEEEEeeeeE
Q 044519 206 FLWRTIPYLLENKELGLVQARWK 228 (534)
Q Consensus 206 ~L~~lv~~~~~~~~v~~V~~~~~ 228 (534)
-.+++.+.+ ++-++|+.--...
T Consensus 114 ~ye~i~~~l-~~~~VgILVNNvG 135 (312)
T KOG1014|consen 114 VYEKLLEKL-AGLDVGILVNNVG 135 (312)
T ss_pred hHHHHHHHh-cCCceEEEEeccc
Confidence 455565665 6667887654443
Done!