Query 044519
Match_columns 534
No_of_seqs 431 out of 3934
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 06:30:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044519.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044519hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 7E-43 2.4E-47 388.8 35.6 356 88-463 137-513 (802)
2 3bcv_A Putative glycosyltransf 99.9 8.3E-27 2.8E-31 223.0 14.9 206 89-314 3-223 (240)
3 1xhb_A Polypeptide N-acetylgal 99.9 7.8E-26 2.7E-30 238.4 20.4 240 88-344 26-299 (472)
4 1qg8_A Protein (spore coat pol 99.9 7E-27 2.4E-31 225.7 8.9 216 91-335 1-236 (255)
5 2d7i_A Polypeptide N-acetylgal 99.9 6.4E-25 2.2E-29 236.0 19.9 237 88-341 109-374 (570)
6 2z86_A Chondroitin synthase; G 99.9 1E-24 3.5E-29 238.0 20.0 219 88-324 90-338 (625)
7 2ffu_A Ppgalnact-2, polypeptid 99.9 3.1E-24 1.1E-28 227.7 15.0 208 88-316 63-290 (501)
8 2z86_A Chondroitin synthase; G 99.9 6.4E-24 2.2E-28 231.7 14.8 222 89-339 373-598 (625)
9 4fix_A UDP-galactofuranosyl tr 99.9 1.2E-23 4E-28 228.0 15.0 230 88-330 177-437 (657)
10 3ckj_A Putative uncharacterize 99.9 6.3E-23 2.2E-27 205.7 8.7 204 88-312 45-260 (329)
11 3l7i_A Teichoic acid biosynthe 99.8 2.8E-22 9.5E-27 222.1 0.0 199 91-313 2-203 (729)
12 2fy7_A Beta-1,4-galactosyltran 99.8 3.9E-20 1.3E-24 180.4 7.5 179 89-339 63-263 (287)
13 3f1y_A Mannosyl-3-phosphoglyce 99.8 5E-19 1.7E-23 179.9 15.2 197 89-314 92-307 (387)
14 2nxv_A ATP synthase subunits r 99.7 5.4E-18 1.8E-22 162.8 13.0 184 88-317 13-204 (249)
15 2bo4_A Mannosylglycerate synth 99.6 5.6E-15 1.9E-19 149.7 16.3 194 95-311 4-212 (397)
16 2wvl_A Mannosyl-3-phosphoglyce 99.1 2.2E-10 7.6E-15 110.7 12.0 109 89-210 51-180 (391)
17 2zu9_A Mannosyl-3-phosphoglyce 98.9 4.9E-09 1.7E-13 104.5 12.3 111 91-214 51-184 (394)
18 1fo8_A Alpha-1,3-mannosyl-glyc 98.9 3.4E-09 1.2E-13 104.9 9.1 117 91-226 2-139 (343)
19 3lw6_A FI08434P, beta-4-galact 98.4 6.2E-07 2.1E-11 84.1 9.7 180 90-340 50-251 (287)
20 2c0n_A A197; thermophil protei 96.7 0.0027 9.2E-08 56.1 6.5 130 157-305 23-165 (203)
21 3tqd_A 3-deoxy-manno-octuloson 95.6 0.065 2.2E-06 50.5 10.5 183 104-310 35-235 (256)
22 3k8d_A 3-deoxy-manno-octuloson 94.6 0.26 8.9E-06 46.6 11.5 180 104-308 44-240 (264)
23 4fcu_A 3-deoxy-manno-octuloson 94.0 0.17 5.8E-06 47.5 8.6 185 101-309 24-226 (253)
24 3oam_A 3-deoxy-manno-octuloson 93.5 0.29 9.9E-06 45.8 9.3 188 97-309 22-225 (252)
25 3cu0_A Galactosylgalactosylxyl 92.5 1.3 4.3E-05 41.5 11.7 106 88-210 18-153 (281)
26 2d0j_A Galactosylgalactosylxyl 91.7 1.7 5.7E-05 40.0 11.5 104 90-210 2-121 (246)
27 1omz_A Alpha-1,4-N-acetylhexos 91.2 0.63 2.1E-05 44.2 8.3 116 89-226 26-142 (293)
28 1v84_A Galactosylgalactosylxyl 90.8 1.3 4.6E-05 40.8 9.8 104 90-210 2-127 (253)
29 2y6p_A 3-deoxy-manno-octuloson 84.9 5.3 0.00018 36.2 10.3 89 102-219 26-116 (234)
30 3f1c_A Putative 2-C-methyl-D-e 83.1 12 0.0004 34.4 11.8 100 101-218 30-134 (246)
31 1qwj_A Cytidine monophospho-N- 82.6 27 0.00093 31.4 14.3 40 176-217 83-123 (229)
32 2wee_A MOBA-related protein; u 82.4 4.8 0.00016 35.3 8.6 91 101-213 29-120 (197)
33 3d5n_A Q97W15_sulso; NESG, SSR 82.1 3.6 0.00012 36.5 7.6 40 173-214 72-112 (197)
34 3st8_A Bifunctional protein GL 80.9 6.4 0.00022 40.6 10.0 112 96-224 34-147 (501)
35 2waw_A MOBA relate protein; un 79.6 12 0.00041 32.6 10.3 91 101-213 29-120 (199)
36 1h7e_A 3-deoxy-manno-octuloson 79.4 26 0.00087 31.8 12.8 91 101-217 25-117 (245)
37 2j0a_A Beta-1,3-N-acetylglucos 79.3 1.2 4.1E-05 42.3 3.5 109 188-310 92-211 (280)
38 1e5k_A Molybdopterin-guanine d 79.0 4.4 0.00015 36.0 7.1 38 173-213 78-116 (201)
39 4ecm_A Glucose-1-phosphate thy 77.3 5.5 0.00019 37.2 7.6 95 102-216 54-148 (269)
40 3juk_A UDP-glucose pyrophospho 75.1 3.9 0.00013 38.5 5.8 55 159-217 94-152 (281)
41 2qh5_A PMI, ALGA, mannose-6-ph 74.1 25 0.00085 33.4 11.4 96 97-213 31-128 (308)
42 3ngw_A Molybdopterin-guanine d 73.9 14 0.00047 33.0 8.9 85 101-215 24-109 (208)
43 1ezi_A CMP-N-acetylneuraminic 73.4 16 0.00054 32.9 9.4 41 174-215 82-123 (228)
44 4fce_A Bifunctional protein GL 72.4 13 0.00043 37.6 9.3 101 97-223 31-132 (459)
45 3q80_A 2-C-methyl-D-erythritol 71.1 33 0.0011 31.1 10.9 93 101-216 33-127 (231)
46 2e8b_A Probable molybdopterin- 71.0 13 0.00046 32.7 8.1 47 162-211 72-120 (201)
47 1vic_A 3-deoxy-manno-octuloson 70.0 44 0.0015 30.6 11.9 92 101-216 25-118 (262)
48 2gak_A Beta-1,6-N-acetylglucos 66.6 30 0.001 34.3 10.3 107 90-213 83-198 (391)
49 1fxo_A Glucose-1-phosphate thy 64.3 19 0.00065 34.0 8.1 99 97-215 28-126 (293)
50 2vsh_A TARI, 2-C-methyl-D-eryt 64.1 53 0.0018 29.3 10.9 100 101-217 29-134 (236)
51 1i52_A 4-diphosphocytidyl-2-C- 63.9 51 0.0017 29.5 10.8 94 101-217 33-127 (236)
52 2v0h_A Bifunctional protein GL 62.4 36 0.0012 34.2 10.3 93 98-215 29-122 (456)
53 3pnn_A Conserved domain protei 61.7 30 0.001 32.8 9.0 101 96-215 25-140 (303)
54 1vgw_A 4-diphosphocytidyl-2C-m 60.8 87 0.003 27.7 11.8 96 101-217 32-132 (231)
55 1lvw_A Glucose-1-phosphate thy 58.9 32 0.0011 32.5 8.6 99 97-215 29-127 (295)
56 2ux8_A Glucose-1-phosphate uri 57.8 17 0.00059 34.3 6.5 54 159-216 105-160 (297)
57 1hm9_A GLMU, UDP-N-acetylgluco 54.9 45 0.0016 33.5 9.6 96 97-217 34-130 (468)
58 2yc3_A 2-C-methyl-D-erythritol 54.4 19 0.00066 32.2 6.0 94 102-216 31-125 (228)
59 3rsb_A Adenosylcobinamide-phos 53.5 29 0.001 30.1 6.9 93 101-216 25-119 (196)
60 1w55_A ISPD/ISPF bifunctional 53.2 53 0.0018 32.2 9.3 42 173-217 75-117 (371)
61 2xwl_A 2-C-methyl-D-erythritol 52.0 69 0.0024 28.2 9.4 89 102-214 29-118 (223)
62 1mc3_A Glucose-1-phosphate thy 50.0 29 0.00099 32.8 6.6 98 97-214 29-126 (296)
63 2e3d_A UTP--glucose-1-phosphat 49.1 36 0.0012 32.0 7.2 54 159-216 101-161 (302)
64 2xme_A CTP-inositol-1-phosphat 47.4 13 0.00045 33.5 3.6 87 102-212 44-130 (232)
65 2dpw_A Hypothetical protein TT 45.7 1E+02 0.0035 27.4 9.5 37 172-212 70-107 (232)
66 2pa4_A UTP-glucose-1-phosphate 36.3 53 0.0018 31.3 6.2 57 159-217 104-161 (323)
67 3tzt_A Glycosyl transferase fa 35.2 1.3E+02 0.0043 27.9 8.5 117 92-224 5-134 (276)
68 1g9r_A Glycosyl transferase; a 32.6 92 0.0032 29.4 7.2 18 188-205 94-111 (311)
69 2px7_A 2-C-methyl-D-erythritol 27.1 84 0.0029 28.2 5.6 41 174-217 93-134 (236)
70 3cgx_A Putative nucleotide-dip 25.2 3.7E+02 0.013 24.1 10.8 46 169-214 82-128 (242)
71 1djl_A Transhydrogenase DIII; 22.8 2.8E+02 0.0097 24.2 7.5 73 146-232 63-135 (207)
72 3o1n_A 3-dehydroquinate dehydr 22.7 4.5E+02 0.016 24.2 11.0 130 86-230 35-170 (276)
73 2fsv_C NAD(P) transhydrogenase 22.7 2.7E+02 0.0093 24.2 7.3 73 146-232 64-136 (203)
74 3brk_X Glucose-1-phosphate ade 21.4 2.1E+02 0.007 28.1 7.7 103 97-216 38-151 (420)
75 1vpa_A 2-C-methyl-D-erythritol 20.6 1.5E+02 0.0053 26.1 6.0 43 174-216 91-134 (234)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=7e-43 Score=388.81 Aligned_cols=356 Identities=24% Similarity=0.373 Sum_probs=246.1
Q ss_pred CCCCcEEEEEeccCchH-HHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhch------hhhhhhHHHHHHHHHHHhhcC
Q 044519 88 KSYPMVLVQIPMYNEKE-VYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRT------DFFQYTQKLVELECLKWIEKG 159 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~-~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~------~~~~~~~~~v~~~~~~~~~~~ 159 (534)
++.|+|||+||+|||++ .+++||+|+.+|+||+++++|+|+|| |+|+|.+. +..+...+.+++.+++
T Consensus 137 ~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~----- 211 (802)
T 4hg6_A 137 EELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRE----- 211 (802)
T ss_dssp TTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHH-----
T ss_pred cCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHh-----
Confidence 56899999999999995 45999999999999987776766665 88887431 1111111233333333
Q ss_pred ccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhH
Q 044519 160 VNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTR 239 (534)
Q Consensus 160 ~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~ 239 (534)
.+++++.++++++||++|+|.|++++ ++|||+++|+|++++||+++++++.+++||++++|+++....|++. ....
T Consensus 212 ~~v~~i~~~~~~~GKa~alN~gl~~a---~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~-~~~~ 287 (802)
T 4hg6_A 212 LGVVYSTRERNEHAKAGNMSAALERL---KGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDP-IQRN 287 (802)
T ss_dssp HTCEEEECSSCCSHHHHHHHHHHHHC---CCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCH-HHHH
T ss_pred cCcEEEEecCCCCcchHHHHHHHHhc---CCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCch-Hhhh
Confidence 46778888888788999999999999 9999999999999999999999999988999999999988777642 1111
Q ss_pred hHhh-----hcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHhCCCEEEEeccCccc
Q 044519 240 LQEM-----SLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASLKGWKFVFVGDLGVK 314 (534)
Q Consensus 240 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 314 (534)
.... +....+...+...... ....++|+++++||++++++|||+++.++||.+++.|+.++||++.++|++.++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~~~~~Rr~al~~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~~~~~ 366 (802)
T 4hg6_A 288 LALGDRCPPENEMFYGKIHRGLDRW-GGAFFCGSAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYIDRAMIA 366 (802)
T ss_dssp HTCCTTSCCTTHHHHHTHHHHHHHT-TCCCCCSSSEEEEHHHHHHHTTCCCSSSSHHHHHHHHHHTTTCCEEECCCCCEE
T ss_pred hhHHhhhhHHHHHHHHHHHhhHhhc-CCceecccchhhhHHHHHHcCCcCCCCcchHHHHHHHHHHcCCeEEEecCCEEE
Confidence 1100 0011122222211111 223368999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCHHHHHHHHhhhccchhhHHhhhhhhhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-cc-
Q 044519 315 NELPSTFKAYRYQQHRWSCGPSNLFSKMTREIILCERVSVWKRLYLIYAFFIVRKIIAHWVTFFFYCIVIPTSVLV-PE- 392 (534)
Q Consensus 315 ~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~-~~- 392 (534)
++.|+|++++.+||+||.+|..|.+.++. .+..++++..+++.++..+.. ++.++..+ .+ ++.|+.++. +.
T Consensus 367 ~~~p~t~~~~~~Qr~RW~~G~~q~l~~~~--pl~~~~l~~~~rl~~l~~~~~---~~~~~~~l-i~-ll~p~~~ll~~~~ 439 (802)
T 4hg6_A 367 GLQPETFASFIQQRGRWATGMMQMLLLKN--PLFRRGLGIAQRLCYLNSMSF---WFFPLVRM-MF-LVAPLIYLFFGIE 439 (802)
T ss_dssp ECCCCSHHHHHHHHHHHHHHHHHHHHHSC--TTSCSSCCHHHHHHHHHHHHH---TTHHHHHH-HH-HHHHHHHHHHCCC
T ss_pred ecCCCCHHHHHHHHHHHHccHHHHHHHhC--ccccCCCCHHHHHHHHHHHHH---HHHHHHHH-HH-HHHHHHHHHHhHH
Confidence 99999999999999999999999988753 234467888888876654332 11111111 11 122332222 11
Q ss_pred ---cchhHHHHHHHHHHHHHH---HHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEcccCCCcc
Q 044519 393 ---IQLTKPIAIYIPATITLL---NAVCTPRSFHLIVFWILFENVMSLLRAKAAIIGLLEANRVNEWVVTEKHGNTK 463 (534)
Q Consensus 393 ---~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~l~gl~~~~~~~~~~~T~K~~~~~ 463 (534)
.....+..+++|.++... ..+....... ....+++.+++++.+.+++.++++ .++.+|.+|+|++..+
T Consensus 440 ~~~~~~~~~~~~~lp~~l~~~~~~~~~~~~~r~~--~~~~l~~~~~~~~~~~a~l~~l~~-~~~~~f~VT~Kg~~~~ 513 (802)
T 4hg6_A 440 IFVATFEEVLAYMPGYLAVSFLVQNALFARQRWP--LVSEVYEVAQAPYLARAIVTTLLR-PRSARFAVTAKDETLS 513 (802)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHHHHHHHTTTSCT--THHHHHHHHHHHHHHHHHHHHHHS-TTCCCCCCCCCCCCCS
T ss_pred HhhcCHHHHHHHHHHHHHHHHHHHHHHhcCcHHH--HHHHHHHHHHHHHHHHHHHHHHhC-CCCCcceECCCCcccc
Confidence 112223333444333211 1122222211 122466777888889999999994 4678999999976544
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.94 E-value=8.3e-27 Score=223.02 Aligned_cols=206 Identities=15% Similarity=0.115 Sum_probs=139.0
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
..|.|||+||+||+++.+++||+|+++|+|++.+++| |+|+|+|+|.+ +++++.++ ..++++++ .
T Consensus 3 ~~p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~~eiIv-vDd~S~d~t~~---------~~~~~~~~----~~~i~~i~-~ 67 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIIL-IDDESPDNCPK---------ICDDYAAQ----YPNIKVIH-K 67 (240)
T ss_dssp CCCSEEEEEEESSCTTTHHHHHHHHHTCSSSSEEEEE-EECCCSSSHHH---------HHHHHHHH----CSSEEEEE-C
T ss_pred CCCcEEEEEecCCCHHHHHHHHHHHHhCcCCCeEEEE-EECCCCcCHHH---------HHHHHHhh----CCCEEEEE-C
Confidence 3689999999999999999999999999998655433 56668888877 77665544 46788885 3
Q ss_pred CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhc-cc
Q 044519 169 NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSL-DY 247 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~-~~ 247 (534)
++.|++.|+|.|+++| +||||+++|+|+.++|++|+++++.+.+ ++.+++.+.....+.+............ ..
T Consensus 68 -~n~G~~~a~N~g~~~a---~g~~i~~lD~Dd~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (240)
T 3bcv_A 68 -KNAGLGMACNSGLDVA---TGEYVAFCDSDDYVDSDMYMTMYNVAQK-YTCDAVFTGLKRITMAGIPTGTVTHQKEFKL 142 (240)
T ss_dssp -CCCCHHHHHHHHHHHC---CSSEEEECCTTCCCCTTHHHHHHHHHHH-HTCSEEEC--------------------CEE
T ss_pred -CCCChHHHHHHHHHHc---CCCEEEEECCCCcCCHHHHHHHHHHHHh-cCCCEEEEeeEEEccCCcccccccccccccc
Confidence 4667999999999999 9999999999999999999999999954 3455555544333322210000000000 00
Q ss_pred chhhh---hhcccccCc--------cccccCCcchhhHHHHHHhC-CCCCC--CccchHHHHHHHHhCCCEEEEeccCcc
Q 044519 248 HFSVE---QEVGSSTCQ--------FFGFNGTAGVWRIQAIEDAG-GWKDR--TTVEDMDLAVRASLKGWKFVFVGDLGV 313 (534)
Q Consensus 248 ~~~~~---~~~~~~~~~--------~~~~~G~~~~~Rr~~l~~~G-g~~~~--~~~ED~~l~~rl~~~G~ki~~~~~~~~ 313 (534)
.+... ......... ....+|+++++||++++++| ||++. ...||.+++.|+.++|+++.++|++..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~~~ 222 (240)
T 3bcv_A 143 YKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQTFY 222 (240)
T ss_dssp ECSHHHHHHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC----
T ss_pred ccCHHHHHHHHHHHhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCCeE
Confidence 00000 000000000 11235788999999999999 99986 458999999999999999999999865
Q ss_pred c
Q 044519 314 K 314 (534)
Q Consensus 314 ~ 314 (534)
+
T Consensus 223 ~ 223 (240)
T 3bcv_A 223 N 223 (240)
T ss_dssp -
T ss_pred E
Confidence 4
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.94 E-value=7.8e-26 Score=238.45 Aligned_cols=240 Identities=14% Similarity=0.095 Sum_probs=168.0
Q ss_pred CCCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEEEE-cCCChhhhchhhhhhhHHHHHHHHHHHhhcCc-cEEE
Q 044519 88 KSYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQVL-DDSTNEVLRTDFFQYTQKLVELECLKWIEKGV-NVKY 164 (534)
Q Consensus 88 ~~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~-Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~-~v~~ 164 (534)
++.|.|||+||+|||+ +.+.+||+|+++|+||+...+|+|+ |+|+|+... ++++++.++ .. ++++
T Consensus 26 ~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~--------~~l~~~~~~----~~~~v~v 93 (472)
T 1xhb_A 26 DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLK--------RPLESYVKK----LKVPVHV 93 (472)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGT--------HHHHHHHHS----SSSCEEE
T ss_pred cCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHH--------HHHHHHHHH----CCCcEEE
Confidence 5689999999999999 9999999999999998753445455 558876444 366665543 34 6888
Q ss_pred EEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhh---HhH
Q 044519 165 ETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMT---RLQ 241 (534)
Q Consensus 165 ~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~---~~~ 241 (534)
++.+++ .|+++|+|.|+++| +||||+++|+|+.++|++|++++..+.++++++++ +.....+.+..... ...
T Consensus 94 i~~~~n-~G~~~a~N~g~~~A---~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~ 168 (472)
T 1xhb_A 94 IRMEQR-SGLIRARLKGAAVS---RGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVC-PIIDVISDDTFEYMAGSDMT 168 (472)
T ss_dssp EECSSC-CCHHHHHHHHHHHC---CSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEE-EEEEEECSSSCCEECCCTTE
T ss_pred EECCCC-CChHHHHHHHHHhc---cCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEE-eeeeeEcCCCceeccCCCcc
Confidence 855544 45999999999999 99999999999999999999999999778877654 44433333211000 000
Q ss_pred --hhhcccchhhh------hhcc----cccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEE
Q 044519 242 --EMSLDYHFSVE------QEVG----SSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFV 306 (534)
Q Consensus 242 --~~~~~~~~~~~------~~~~----~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~ 306 (534)
.+.....+... ...+ ..........|+++++||++++++|||++... +||.|+++|+.+.|+++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~ 248 (472)
T 1xhb_A 169 YGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLE 248 (472)
T ss_dssp EEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEE
T ss_pred cceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEE
Confidence 00000000000 0000 00112233578999999999999999998665 799999999999999999
Q ss_pred EeccCcccccCCcC-------------HHHHHHHHhhhccchhhHHhhhhh
Q 044519 307 FVGDLGVKNELPST-------------FKAYRYQQHRWSCGPSNLFSKMTR 344 (534)
Q Consensus 307 ~~~~~~~~~~~p~t-------------~~~~~~Qr~RW~~G~~~~~~~~~~ 344 (534)
++|.+.++|....+ .+...+...+|..+..+.+....+
T Consensus 249 ~~p~~~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~~p 299 (472)
T 1xhb_A 249 IVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISP 299 (472)
T ss_dssp EEEEEEEEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHHTST
T ss_pred EccCcEEEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 99999886654333 345566677899888776655433
No 4
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.93 E-value=7e-27 Score=225.74 Aligned_cols=216 Identities=13% Similarity=0.122 Sum_probs=152.1
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC-
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN- 169 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~- 169 (534)
|.|||+||+||+++.+++||+|+++|+||+.+++| |+|+|+|+|.+ +++++ .. +.++++++.+.
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~q~~~~~eiiv-vDd~S~d~t~~---------~~~~~----~~-~~~i~~i~~~~~ 65 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFI-MDDNSNEETLN---------VIRPF----LN-DNRVRFYQSDIS 65 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEE-EECSCCHHHHH---------HHGGG----GG-STTEEEEECCCC
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHhccCCceEEEE-EECCCCchHHH---------HHHHH----hh-cCCEEEEecccc
Confidence 68999999999999999999999999999655433 56668888776 55433 22 56788886541
Q ss_pred ------CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEee--cCCCchhhHhH
Q 044519 170 ------RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFV--NADECLMTRLQ 241 (534)
Q Consensus 170 ------~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~--n~~~~~~~~~~ 241 (534)
.+.|+++|+|.|+++| +||||+++|+|+.++|++|++++..+.++|++++|++..... +.+........
T Consensus 66 ~~~~~~~n~G~~~a~N~gi~~a---~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 142 (255)
T 1qg8_A 66 GVKERTEKTRYAALINQAIEMA---EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETV 142 (255)
T ss_dssp SHHHHHSSCHHHHHHHHHHHHC---CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEE
T ss_pred cccccccccCHHHHHHHHHHHc---CCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhcc
Confidence 3556999999999999 999999999999999999999999998889999999988765 43322111100
Q ss_pred hhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhC-CC------CC-CCccchHHHHHHHHhCCCEEEEeccCcc
Q 044519 242 EMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG-GW------KD-RTTVEDMDLAVRASLKGWKFVFVGDLGV 313 (534)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G-g~------~~-~~~~ED~~l~~rl~~~G~ki~~~~~~~~ 313 (534)
.... .........+.|+++++||++++++| || ++ ....||.+++.|+.+.| ++.++|++.+
T Consensus 143 -------~~~~---~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~~~ 211 (255)
T 1qg8_A 143 -------RPAA---QVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEELD 211 (255)
T ss_dssp -------ECCC---SCBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEEEE
T ss_pred -------CchH---HHHHhhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhC-CEEEecCcEE
Confidence 0000 00001223357899999999999998 77 43 23589999999999987 6999998876
Q ss_pred ccc-CCcCHHH--HHHHHhhhccch
Q 044519 314 KNE-LPSTFKA--YRYQQHRWSCGP 335 (534)
Q Consensus 314 ~~~-~p~t~~~--~~~Qr~RW~~G~ 335 (534)
... .+.+... ..+|+.+|.+..
T Consensus 212 ~~r~~~~s~s~~~~~~~~~~~~~~~ 236 (255)
T 1qg8_A 212 LNYITDQSIHFQLFELEKNEFVRNL 236 (255)
T ss_dssp EEEEC--------------CTGGGS
T ss_pred EEEEcCCccchhHHHHHHHHHHHhc
Confidence 543 3444433 345566665544
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.93 E-value=6.4e-25 Score=236.00 Aligned_cols=237 Identities=14% Similarity=0.092 Sum_probs=168.4
Q ss_pred CCCCcEEEEEeccCch-HHHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 88 KSYPMVLVQIPMYNEK-EVYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 88 ~~~P~VsViIP~yne~-~~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
+..|.||||||+|||+ +.+.+||+|+++|+||+...+|+ |+|+|+|++.. +++++++++ ..+++++
T Consensus 109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~--------~~l~~~~~~----~~~v~vi 176 (570)
T 2d7i_A 109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLK--------KPLEDYMAL----FPSVRIL 176 (570)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGT--------HHHHHHHTT----STTEEEE
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHH--------HHHHHHHHh----CCeEEEE
Confidence 5689999999999999 99999999999999987533444 55568898844 377665543 3678888
Q ss_pred EecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHh----H
Q 044519 166 TRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRL----Q 241 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~----~ 241 (534)
+.+ .+.|++.|+|.|+++| ++|||+++|+|+.++|++|+.++..+.+++++ +|++.....+.+....... .
T Consensus 177 ~~~-~n~G~~~A~N~G~~~A---~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~-vv~~~i~~~~~~~~~~~~~~~~~~ 251 (570)
T 2d7i_A 177 RTK-KREGLIRTRMLGASVA---TGDVITFLDSHCEANVNWLPPLLDRIARNRKT-IVCPMIDVIDHDDFRYETQAGDAM 251 (570)
T ss_dssp ECS-SCCCHHHHHHHHHHHC---CSSEEEECCSSEEECTTCSHHHHHHHHHCTTE-EEEEEEEEECTTTCCEECCTTSSC
T ss_pred ECC-CCCCHHHHHHHHHHhc---CCCEEEEEcCCccccccHHHHHHHHHHhCCCE-EEeeeeeccCCCchhhccccCCcc
Confidence 554 4455999999999999 99999999999999999999999999777765 5666555544432110000 0
Q ss_pred hhhccc--chhhhhh-----cc--cccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEec
Q 044519 242 EMSLDY--HFSVEQE-----VG--SSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFVG 309 (534)
Q Consensus 242 ~~~~~~--~~~~~~~-----~~--~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~ 309 (534)
...+.. .+..... .. ........+.|+++++||++++++|||++... .||.|+++|+.+.|+++.++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p 331 (570)
T 2d7i_A 252 RGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIP 331 (570)
T ss_dssp EEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred cccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEcc
Confidence 000000 0000000 00 01112233579999999999999999998654 799999999999999999999
Q ss_pred cCcccccC----CcC-------HHHHHHHHhhhccchhhHHhh
Q 044519 310 DLGVKNEL----PST-------FKAYRYQQHRWSCGPSNLFSK 341 (534)
Q Consensus 310 ~~~~~~~~----p~t-------~~~~~~Qr~RW~~G~~~~~~~ 341 (534)
.+.+++.. |.+ .+...+...+|.....+.+.+
T Consensus 332 ~~~v~H~~r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~ 374 (570)
T 2d7i_A 332 CSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQ 374 (570)
T ss_dssp EEEEEECCCSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHT
T ss_pred CeEEEEEccccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 99887642 211 345566677898887665543
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.92 E-value=1e-24 Score=237.99 Aligned_cols=219 Identities=19% Similarity=0.215 Sum_probs=159.9
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
+..|.|||+||+|||++.+.+||+|+.+|+++.. .+|+ |+|+|+|++.+ +++++. ...+++++.
T Consensus 90 ~~~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~~-~eiivvDd~s~d~t~~---------~~~~~~-----~~~~i~~i~ 154 (625)
T 2z86_A 90 LIIDGLSIVIPTYNRAKILAITLACLCNQKTIYD-YEVIVADDGSKENIEE---------IVREFE-----SLLNIKYVR 154 (625)
T ss_dssp CCCCCEEEEEEESSCHHHHHHHHHHHHTCCCSSC-EEEEEEEESCSSCHHH---------HHHTTT-----TTSCEEEEE
T ss_pred ccCCcEEEEEecCCcHHHHHHHHHHHHhhccCCC-eEEEEEeCCCchhHHH---------HHHHhh-----hcCCeEEEE
Confidence 3458999999999999999999999999988743 4444 55568887766 655432 235788887
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcc
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLD 246 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~ 246 (534)
+++.++|+++|+|.|+++| ++|||+++|+|+.++|++|.+++..+.++|+++++++.....+...............
T Consensus 155 ~~~~~~g~~~a~N~g~~~a---~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 231 (625)
T 2z86_A 155 QKDYGYQLCAVRNLGLRAA---KYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLI 231 (625)
T ss_dssp ECCCSCCHHHHHHHHHHHC---CSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGG
T ss_pred eCCCCcchhHHHHHHHHhC---CcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHh
Confidence 7665667999999999999 9999999999999999999999999987899998888776554432221111100000
Q ss_pred c---------------------c-----hhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHH
Q 044519 247 Y---------------------H-----FSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVR 297 (534)
Q Consensus 247 ~---------------------~-----~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~r 297 (534)
. . +...............+.|+++++||++++++|||++... .||.|++.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~R 311 (625)
T 2z86_A 232 NEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYR 311 (625)
T ss_dssp GTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHH
T ss_pred hhcchhccCCchhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhh
Confidence 0 0 0000000111112233689999999999999999998664 699999999
Q ss_pred HHhCCCEEEEeccCcccccCCcCHHHH
Q 044519 298 ASLKGWKFVFVGDLGVKNELPSTFKAY 324 (534)
Q Consensus 298 l~~~G~ki~~~~~~~~~~~~p~t~~~~ 324 (534)
+.++|+++.++|++.+++..|.+-...
T Consensus 312 l~~~G~~i~~~p~~~v~H~~~~~~~~~ 338 (625)
T 2z86_A 312 LYREGCYFRSVEGAMAYHQEPPGKENE 338 (625)
T ss_dssp HHHTTCEEEECGGGCEEEECCC-----
T ss_pred HHhCCceEEEcccchhhccCCccccch
Confidence 999999999999999999888765443
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.91 E-value=3.1e-24 Score=227.74 Aligned_cols=208 Identities=15% Similarity=0.101 Sum_probs=149.8
Q ss_pred CCCCcEEEEEeccCchH-HHHHHHHHHHcCCCCCCceEEE-EEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 88 KSYPMVLVQIPMYNEKE-VYKLSIGAACGLSWPSDRLIVQ-VLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~-~l~~~L~sl~~q~yp~~~~~I~-V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
++.|.||||||+|||++ .+.++|+|+++|++|+...+|+ |+|+|+|++.+ +.+ ++..+++++
T Consensus 63 ~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~--------~~~--------~~~~~v~vi 126 (501)
T 2ffu_A 63 VDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDG--------ALL--------GKIEKVRVL 126 (501)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHH--------HGG--------GGBTTEEEE
T ss_pred cCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHH--------HHH--------hcCCCEEEE
Confidence 56899999999999996 9999999999999987533444 45558888765 222 224678888
Q ss_pred EecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhh-Hh----
Q 044519 166 TRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMT-RL---- 240 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~-~~---- 240 (534)
+.+ ++.|++.|+|.|+++| +||||+++|+|+.++|++|+.++..+.+++. ++|++.....+.+..... ..
T Consensus 127 ~~~-~n~G~~~A~N~G~~~A---~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~-~vv~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
T 2ffu_A 127 RND-RREGLMRSRVRGADAA---QAKVLTFLDSHCECNEHWLEPLLERVAEDRT-RVVSPIIDVINMDNFQYVGASADLK 201 (501)
T ss_dssp ECS-SCCHHHHHHHHHHHHC---CSSEEEECCSSEEECTTCHHHHHHHHHHCTT-EEEEEEEEEECTTTCCEECBCSSEE
T ss_pred ECC-CCcCHHHHHHHHHHhc---CCCEEEEECCCcccCccHHHHHHHHHHhCCC-eEEEeeeccCcCCCceeecCCcccc
Confidence 554 4455999999999999 9999999999999999999999999966655 477776655543321000 00
Q ss_pred Hhhhcccchh-----hh-hhcc----cccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEE
Q 044519 241 QEMSLDYHFS-----VE-QEVG----SSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVF 307 (534)
Q Consensus 241 ~~~~~~~~~~-----~~-~~~~----~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~ 307 (534)
........+. .. ...+ ........+.|++.++||++++++|||++... +||.|+++|+.+.|+++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~ 281 (501)
T 2ffu_A 202 GGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEI 281 (501)
T ss_dssp EEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEE
T ss_pred eEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEE
Confidence 0000000000 00 0000 00111223579999999999999999998654 8999999999999999999
Q ss_pred eccCccccc
Q 044519 308 VGDLGVKNE 316 (534)
Q Consensus 308 ~~~~~~~~~ 316 (534)
+|++.+.+.
T Consensus 282 ~p~~~v~H~ 290 (501)
T 2ffu_A 282 IPCSRVGHV 290 (501)
T ss_dssp EEEEEEEEC
T ss_pred ccCcEEEEE
Confidence 999888775
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.90 E-value=6.4e-24 Score=231.68 Aligned_cols=222 Identities=14% Similarity=0.150 Sum_probs=166.2
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
..|.|||+||+||+++.+++||+|+++|+|++.+++| |+|+|+|+|.+ +++++.+ +..++++++
T Consensus 373 ~~~~vsiii~~yn~~~~l~~~l~s~~~q~~~~~eiiv-vdd~S~d~t~~---------~~~~~~~----~~~~i~~~~-- 436 (625)
T 2z86_A 373 RVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCI-CDDGSTDDTLR---------ILQEHYA----NHPRVRFIS-- 436 (625)
T ss_dssp SSCSEEEEEEESSCTTTHHHHHHHHHSSSCCSEEEEE-EEESCSSSHHH---------HHHHHHT----TCTTEEEEE--
T ss_pred cCCeEEEEEeCCCCHHHHHHHHHHHHhCcCCCeEEEE-EECcCChhHHH---------HHHHHHh----hCCcEEEEe--
Confidence 4689999999999999999999999999998755433 66779998877 6665443 346788884
Q ss_pred CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccc
Q 044519 169 NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYH 248 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~ 248 (534)
+++.|+++|+|.|++.| +||||+++|+|++++|++|++++..+.++|++++|++.....+.+......... .. .
T Consensus 437 ~~n~G~~~a~n~g~~~a---~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~-~ 510 (625)
T 2z86_A 437 QKNKGIGSASNTAVRLC---RGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYN--WP-I 510 (625)
T ss_dssp ECCCCHHHHHHHHHHHC---CSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECCC--CS-S
T ss_pred CCCCCHHHHHHHHHHhc---CCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCcc--cc-c
Confidence 35566999999999999 999999999999999999999999998899999999987766655433221100 00 0
Q ss_pred hhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCC-ccchHHHHHHHHhCCCEEEEeccCccc---ccCCcCHHHH
Q 044519 249 FSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT-TVEDMDLAVRASLKGWKFVFVGDLGVK---NELPSTFKAY 324 (534)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~-~~ED~~l~~rl~~~G~ki~~~~~~~~~---~~~p~t~~~~ 324 (534)
+..... ....+.|+++++||++++++|||++.. .+||.|++.|+.+.| ++.++|++..+ +....+.+..
T Consensus 511 ~~~~~~------~~~~~~~~~~~~~r~~~~~~ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~~~~~r~h~~~~s~~~~ 583 (625)
T 2z86_A 511 YSREKL------TSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVG-PFKHINKICYNRVLHGENTSIKKL 583 (625)
T ss_dssp CCHHHH------TTSCCCCSCEEEEHHHHTTTTCCCSSCSSCHHHHHHHHHTTTS-CEEEEEEEEEEEECC----CCSSH
T ss_pred CCHHHH------hhcccCCceEEEEHHHHHHhCCCCCccCChHHHHHHHHHHHhC-CEEEeCCcEEEEEECCCccchhhH
Confidence 000000 012246889999999999999999853 589999999999999 99999998765 3445566666
Q ss_pred HHHHhhhccchhhHH
Q 044519 325 RYQQHRWSCGPSNLF 339 (534)
Q Consensus 325 ~~Qr~RW~~G~~~~~ 339 (534)
..|+.+|.+...+.+
T Consensus 584 ~~~~~~~~~~~~~~l 598 (625)
T 2z86_A 584 DIQKENHFKVVNESL 598 (625)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 677766655444433
No 9
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.90 E-value=1.2e-23 Score=227.97 Aligned_cols=230 Identities=16% Similarity=0.127 Sum_probs=156.2
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCce-EEEEE-cCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRL-IVQVL-DDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~-~I~V~-Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
...|+|||+||+||+++.+.+||+|+.+|+|+.+.. +|+|+ |+|+|++... +.. +..++ .+.+++++
T Consensus 177 ~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~-------~~~-e~~~~---~~~~I~vI 245 (657)
T 4fix_A 177 PGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHP-------DFP-AAAAR---LGSRLSIH 245 (657)
T ss_dssp CSCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGST-------THH-HHHHH---HGGGEEEE
T ss_pred CCCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchH-------HHH-HHHHh---cCCCEEEE
Confidence 346899999999999999999999999999832222 34445 5577753220 122 22222 24578888
Q ss_pred EecCCCCCChhHHHHHHHhhhcc-CCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCch------hh
Q 044519 166 TRKNRNGYKAGALKEGLEKQYVK-DCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECL------MT 238 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~~-~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~------~~ 238 (534)
..+ |.|.++|.|.|++.|... ++|||+++|+|++++|++|++++..+..++++++|++.....+.+... ..
T Consensus 246 ~~~--N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~ 323 (657)
T 4fix_A 246 DQP--NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVD 323 (657)
T ss_dssp ECC--CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEE
T ss_pred ECC--CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEec
Confidence 543 666999999999998443 679999999999999999999999998888999998876544432111 00
Q ss_pred H-------hHhhhcccchh---h-----hhhcccccCccccccCCcchhhHHHHHHhCCCCCCC-ccchHHHHHHHHhCC
Q 044519 239 R-------LQEMSLDYHFS---V-----EQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT-TVEDMDLAVRASLKG 302 (534)
Q Consensus 239 ~-------~~~~~~~~~~~---~-----~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~-~~ED~~l~~rl~~~G 302 (534)
. .....+...+. . ...............|+++++||++++++||+++.. ..||.|++.|+.++|
T Consensus 324 ~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~~F~~~ED~Dl~lR~~~~G 403 (657)
T 4fix_A 324 RSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHG 403 (657)
T ss_dssp TTTTEEEECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCSCSSSSHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChhHhccCcHHHHHHHHHHcC
Confidence 0 00000000000 0 000001111223457899999999999999998533 379999999999999
Q ss_pred CEEEEeccCcccccCCcC------HHHHHHHHhh
Q 044519 303 WKFVFVGDLGVKNELPST------FKAYRYQQHR 330 (534)
Q Consensus 303 ~ki~~~~~~~~~~~~p~t------~~~~~~Qr~R 330 (534)
++++++|++.++|....+ ++.+...|.|
T Consensus 404 ~ki~~~p~a~V~H~~~~~~~~~s~~r~Yy~~RN~ 437 (657)
T 4fix_A 404 YPTVTLPGAAIWHMAWSDKDDAIDWQAYFHLRNR 437 (657)
T ss_dssp CCEEEEEEEEEEECCSSSSCCTTSTHHHHHHHHH
T ss_pred CeEEEECCEEEEEcCcCccccccHHHHHHHHHHH
Confidence 999999999998865432 3445544444
No 10
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.87 E-value=6.3e-23 Score=205.66 Aligned_cols=204 Identities=15% Similarity=0.051 Sum_probs=138.5
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcCCCCC-CceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPS-DRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~-~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
...|.|||+||+|||++.+.+||+|+++|+||. .++ |+|+|+|+|+|.+ +++++..+. ..+++++.
T Consensus 45 ~~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~~~ei-ivVDdgS~D~t~~---------~~~~~~~~~---~~~~~~~~ 111 (329)
T 3ckj_A 45 KAGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDEL-IVLDSGSTDDTEI---------RAVAAGARV---VSREQALP 111 (329)
T ss_dssp TTTCCEEEEEEESSCTTTHHHHHHHHGGGBTTTBSEE-EEEECSCCSSHHH---------HHHHTTCEE---EEHHHHCT
T ss_pred ccCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCCCcEE-EEEeCCCCchHHH---------HHHHhhhhh---ccceeeec
Confidence 456899999999999999999999999999985 443 3366679998877 655431110 01111221
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcCCcEEEEeeeeEeecC-CC-------chh
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLENKELGLVQARWKFVNA-DE-------CLM 237 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~-~~-------~~~ 237 (534)
+.+.+.||+.|+|.|++.| +||||+++|+|+. ++|++|.+++..+.++|++++|+|....... +. ...
T Consensus 112 ~~~~n~G~~~a~n~g~~~a---~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~ 188 (329)
T 3ckj_A 112 EVPIRPGKGEALWRSLAAS---RGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGG 188 (329)
T ss_dssp TSCCCCSHHHHHHHHHHHC---CCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------
T ss_pred cCCCCCCHHHHHHHHHHhC---CCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCC
Confidence 2456677999999999999 9999999999999 8999999999997688999999997654221 00 111
Q ss_pred hHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHHh-CCCE-EEEeccCc
Q 044519 238 TRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRASL-KGWK-FVFVGDLG 312 (534)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~-~G~k-i~~~~~~~ 312 (534)
.+.........+. .............|++.++||++++++| |++ ...||.++..++.+ .|++ +..+|...
T Consensus 189 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~rr~~l~~i~-f~~-~~~~D~~l~~r~~~~~g~~~i~~v~~~~ 260 (329)
T 3ckj_A 189 GRVTELVARPLLA---ALRPELGCILQPLGGEYAATRELLTSVP-FAP-GYGVEIGLLVDTFDRLGLDAIAQVNLGV 260 (329)
T ss_dssp CHHHHHTHHHHHH---HHCGGGGGCSCTTCSCEEEEHHHHTTSC-BCC-GGGHHHHHHHHHHHHHCGGGEEEEEEEE
T ss_pred CceehhhHHHHHH---HhhhhhccccCCCccceeeeHHHHHhCC-CCC-CCcccHHHHHHHHHhcCCccEeeecceE
Confidence 1111000000000 0011112223345777899999999996 764 45799999999986 6764 77776544
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.83 E-value=2.8e-22 Score=222.08 Aligned_cols=199 Identities=15% Similarity=0.151 Sum_probs=0.0
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNR 170 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~ 170 (534)
|.|||+||+||+++.+++||+|+++|+|++.+++| |+|+|+|+|.+ +++++.+++ +.++++++.+ .
T Consensus 2 p~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~~EIIV-VDDgStD~t~~---------il~~~~~~~---~~~i~~i~~~-~ 67 (729)
T 3l7i_A 2 NKLTIIVTYYNAEEYITGCLESIKQQRTQDFNLII-VNDGSTDQSKK---------LMDEAIKDY---DKNIRFIDLD-E 67 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEcCCCHHHHHHHHHHHHhCCCCCeEEEE-EECCCCCcHHH---------HHHHHHHhC---CCCEEEEECC-C
Confidence 78999999999999999999999999999766443 66678998887 776665543 3578888544 4
Q ss_pred CCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchh
Q 044519 171 NGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFS 250 (534)
Q Consensus 171 ~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~ 250 (534)
+.|.++|+|.|++.| +||||+++|+|+.++|++|+++++.+. ++++ +.+.....+.+.............. ..
T Consensus 68 n~G~~~arN~gi~~A---~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~--v~~~~~~~~~~~~~~~~~~~~~~~~-~~ 140 (729)
T 3l7i_A 68 NSGHAHARNIALEEV---ETPYFMFLDADDELASYAITFYLEKFN-NTDG--LIAPIHSFTTQRPQFVDLDRVRVEY-FN 140 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHhc---cCCEEEEECCCCCCChhHHHHHHHHhc-CCCE--EEEeeEEeecCCCccccccceeeee-ec
Confidence 556999999999999 999999999999999999999999994 4443 3333322222211111111100000 00
Q ss_pred hhhhcccccCccccccCCcchhhHHHHHHhC-CCCCCC-ccchHHHHHHHHhCCCEEEEe-ccCcc
Q 044519 251 VEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG-GWKDRT-TVEDMDLAVRASLKGWKFVFV-GDLGV 313 (534)
Q Consensus 251 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G-g~~~~~-~~ED~~l~~rl~~~G~ki~~~-~~~~~ 313 (534)
..... ........+++.++||++++++| +|++.. ..||.+++.|+..+|+++.++ +.+..
T Consensus 141 ~~~~~---~~~~~~~~~~~~~~rr~~l~~~gl~fde~~~~~ED~d~~~rl~~~g~~i~~~~~~~~~ 203 (729)
T 3l7i_A 141 AKENI---NSFLRKQSACNIIFRTAIVRAHHIRFNENLNTYVDWSFVLEYMKYVNKFVRIFNFPFY 203 (729)
T ss_dssp ------------------------------------------------------------------
T ss_pred chhhH---HHHhhccchhheeeeHHHHHHcCCCcCCCCCcccCHHHHHHHHHhcCCEEEecCcEEE
Confidence 00000 01111346788999999999999 899864 699999999999999999999 55554
No 12
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.80 E-value=3.9e-20 Score=180.37 Aligned_cols=179 Identities=17% Similarity=0.194 Sum_probs=127.3
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHH---cCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAAC---GLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~---~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
..|+||||||+||+++.++++|+|+. +|++++ .+|+|+||++|.+.
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~--~EIiVVdds~d~~f----------------------------- 111 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLD--YGIYVINQAGDTIF----------------------------- 111 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCE--EEEEEEEECSSSCC-----------------------------
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCC--ceEEEEEeCCCCcc-----------------------------
Confidence 45899999999999999999999998 677775 55667777665321
Q ss_pred EecCCCCCChhHHHHHH----HhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhH
Q 044519 166 TRKNRNGYKAGALKEGL----EKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQ 241 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl----~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~ 241 (534)
+++.++|.|+ +.| ++||++++|+|++++||++... ...+|+. .. .....
T Consensus 112 -------~~a~a~N~G~~~al~~A---~gd~i~flD~D~i~~~d~~~~~---~~~~p~~---------~~---~~~~~-- 164 (287)
T 2fy7_A 112 -------NRAKLLNVGFQEALKDY---DYTCFVFSDVDLIPMNDHNAYR---CFSQPRH---------IS---VAMDK-- 164 (287)
T ss_dssp -------CHHHHHHHHHHHHHHHS---CCCEEEEECTTEEESBTTSCCS---CCSSCEE---------CC---CEEGG--
T ss_pred -------chhhhhhhHHHHHHHhC---CCCEEEEECCCcccCCCcceEe---cCCCCce---------EE---Eeecc--
Confidence 2567788888 777 9999999999999999952100 0011110 00 00000
Q ss_pred hhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEecc-----Ccc
Q 044519 242 EMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFVGD-----LGV 313 (534)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~-----~~~ 313 (534)
.. + . .....+.|+++++||++++++|||++... .||.|++.|+.++|+++...+. ...
T Consensus 165 -~~----~------~---~~~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i 230 (287)
T 2fy7_A 165 -FG----F------S---LPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHI 230 (287)
T ss_dssp -GT----T------S---CSSTTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEEC
T ss_pred -cc----c------C---CCcCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEE
Confidence 00 0 0 01123568999999999999999998755 5999999999999999884432 222
Q ss_pred c-------ccCCcCHHHHHHHHhhhccchhhHH
Q 044519 314 K-------NELPSTFKAYRYQQHRWSCGPSNLF 339 (534)
Q Consensus 314 ~-------~~~p~t~~~~~~Qr~RW~~G~~~~~ 339 (534)
+ ...|..++...+|+.||.++.++.+
T Consensus 231 ~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 231 RHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp C---------CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred ecCCCcccCCCHHHHHHHhhcccEEcCCCcccC
Confidence 2 2457788899999999999987654
No 13
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.79 E-value=5e-19 Score=179.92 Aligned_cols=197 Identities=14% Similarity=0.023 Sum_probs=137.1
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHHc--CCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAACG--LSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~~--q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
..|+|||+||+|||++.|.+||+|+.+ |+||....+|+|+|+|+|+|.+ ++++.. . +++.
T Consensus 92 ~~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~---------i~~~~~-------~--~v~~ 153 (387)
T 3f1y_A 92 LGLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAG---------VAASHG-------A--EVYS 153 (387)
T ss_dssp HTCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHH---------HHHHTT-------C--EEEE
T ss_pred CCCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHH---------HHHHhC-------c--hhcc
Confidence 468999999999999999999999987 4665332233366779999887 665431 1 2222
Q ss_pred ------ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcCCcEEEEeeeeEeecCC------
Q 044519 167 ------RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLENKELGLVQARWKFVNAD------ 233 (534)
Q Consensus 167 ------r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~------ 233 (534)
+.+.+.||+.|+|.|++.| +||||+++|+|+. ++|++|.+++..+.++|++++|.|........
T Consensus 154 ~~~~~i~~~~n~G~g~A~n~G~~~A---~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~ 230 (387)
T 3f1y_A 154 ENELMSGYGDAHGKGDAMWRALSVT---RGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEE 230 (387)
T ss_dssp GGGTTGGGCSCCSHHHHHHHHTTTC---CSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CC
T ss_pred cceeEecCCccCCHHHHHHHHHHhc---CCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeecccccccccccc
Confidence 2235667999999999999 9999999999999 89999999999997788999999865422111
Q ss_pred --CchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCccchHHHHHHHH-hCCCE-EEEec
Q 044519 234 --ECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTTVEDMDLAVRAS-LKGWK-FVFVG 309 (534)
Q Consensus 234 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~-~~G~k-i~~~~ 309 (534)
.+...+... ...+.. ............|++.++||++++++ +++ ...++|.++..++. +.|++ +..+|
T Consensus 231 ~~~g~v~~~~~---~~l~~~---~~~~l~~~~d~~sG~~a~rR~~l~~i-~f~-~gyg~e~ell~~~~~~~G~~~I~eVp 302 (387)
T 3f1y_A 231 DGGGRVTELTA---KPLFNL---FYPELAGFVQPLAGEFVADRELFCSI-PFL-TGYAVETGIMIDVLKKVGLGAMAQVD 302 (387)
T ss_dssp BCCSHHHHHTH---HHHHHH---HCGGGTTCSCTTCSCEEEEHHHHTTS-CEE-CSTTHHHHHHHHHHHHHCGGGEEEEE
T ss_pred ccCCchhhhhH---HHHHHH---HhHhhccccccccccEEEEHHHHHhC-CCC-CCcchHHHHHHHHHHhcCCCeEEEEe
Confidence 111111100 000000 00111122333577889999999999 675 45788999999885 56987 99998
Q ss_pred cCccc
Q 044519 310 DLGVK 314 (534)
Q Consensus 310 ~~~~~ 314 (534)
-....
T Consensus 303 i~~~~ 307 (387)
T 3f1y_A 303 LGERQ 307 (387)
T ss_dssp EEECC
T ss_pred cceee
Confidence 76643
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.75 E-value=5.4e-18 Score=162.79 Aligned_cols=184 Identities=10% Similarity=0.015 Sum_probs=121.2
Q ss_pred CCCCcEEEEEeccCchHHHHHHHHHHHcC-CCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 88 KSYPMVLVQIPMYNEKEVYKLSIGAACGL-SWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~l~~~L~sl~~q-~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
+..|.+|| ||+||+++.+++||+|+.+. ..+.. .+|+|+||++.+ .
T Consensus 13 ~~~~~iSI-I~~yN~~~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d--~----------------------------- 59 (249)
T 2nxv_A 13 ESTLMFSV-CSLVRDQAKYDRLLESFERFGFTPDK-AEFLAADNREGN--Q----------------------------- 59 (249)
T ss_dssp CCCCSEEE-EEEESCHHHHHHHHHHHHHTTCCTTT-EEEEEEECTTSC--S-----------------------------
T ss_pred CCcceEEE-EEeeCCHHHHHHHHHHHHHhccCCCc-EEEEEEECCCCC--c-----------------------------
Confidence 34678997 47799999999999977642 21222 567677774421 0
Q ss_pred ecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhc----CCcEEEEeeeeEeecCCCchhhHhHh
Q 044519 167 RKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLE----NKELGLVQARWKFVNADECLMTRLQE 242 (534)
Q Consensus 167 r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~----~~~v~~V~~~~~~~n~~~~~~~~~~~ 242 (534)
.|.+.|+|.|++.| +|||++++|+|+.++|++|+++++.+++ +|++++++......+...... ....
T Consensus 60 -----~g~a~a~N~Gi~~A---~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g~~~-~~~~ 130 (249)
T 2nxv_A 60 -----FHGFSWHKQMLPRC---KGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLNHSV-TAQA 130 (249)
T ss_dssp -----CCTTTHHHHHGGGC---CSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSCTTS-CCCE
T ss_pred -----ccHHHHHHHHHHhc---CCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeecccccCCCCcee-eecc
Confidence 13578999999999 9999999999999999999999999865 499988875433222111000 0000
Q ss_pred hhcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCC---ccchHHHHHHHHhCCCEEEEeccCcccccC
Q 044519 243 MSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRT---TVEDMDLAVRASLKGWKFVFVGDLGVKNEL 317 (534)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~---~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~ 317 (534)
.............+..........|+++++||++ .|||++.. ..||.|++.|+.++|+++.+.|.. ++|..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~~-v~H~~ 204 (249)
T 2nxv_A 131 LHISDVFGNDRRRGNVPCRVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDFH-LHHYG 204 (249)
T ss_dssp EEEEETTEEEEEESCSSEEEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCCC-CEECC
T ss_pred cccCCccccccccCCCceEcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEeccE-EEECC
Confidence 0000000000000011111223579999999999 78899632 358999999999999999999865 55544
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.62 E-value=5.6e-15 Score=149.73 Aligned_cols=194 Identities=12% Similarity=0.050 Sum_probs=121.9
Q ss_pred EEEeccCchHHHHHHHHHHH-cCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHh-hcCccEEEEEec-CC-
Q 044519 95 VQIPMYNEKEVYKLSIGAAC-GLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWI-EKGVNVKYETRK-NR- 170 (534)
Q Consensus 95 ViIP~yne~~~l~~~L~sl~-~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~-~~~~~v~~~~r~-~~- 170 (534)
|+||+ ||+ .+..+++++. .+.+|..++ |+|+|||+|+|.+ ++++.+++.+ +.+.++...... ..
T Consensus 4 VIiP~-~eE-~I~~vl~~l~~~~~~~~~EI-IVVDDGStD~T~e---------ia~~la~~~~~~~g~~vi~~~~~r~~~ 71 (397)
T 2bo4_A 4 VVFPF-KHE-HPEVLLHNVRVAAAHPRVHE-VLCIGYERDQTYE---------AVERAAPEISRATGTPVSVRLQERLGT 71 (397)
T ss_dssp EEEEC-CSS-CHHHHHHHHHHHHHSTTCCE-EEEEESSCCHHHH---------HHHHHHHHHHHHHSCCEEEEECCCCSS
T ss_pred EEEeC-Ccc-CHHHHHHHHHHhccCCCeEE-EEEECcCCccHHH---------HHHHhhhhcccccCCeEEEEecccCCC
Confidence 45555 443 4777777774 234555554 4477889999998 7776666654 445555443212 12
Q ss_pred -CCCChhHHHHHH----HhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhH-hh
Q 044519 171 -NGYKAGALKEGL----EKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQ-EM 243 (534)
Q Consensus 171 -~g~Ka~aln~gl----~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~-~~ 243 (534)
+.||+.|++.|+ +++ +||+++++|||.. .+|+++.++++.+. + ++++|.|...- ....+...+.. ..
T Consensus 72 ~n~GkG~Al~~G~~~Al~~a---~gd~vv~mDADlq~~~P~~i~~Ll~~l~-~-g~D~V~g~~~r-~~~~~~~~~~~~~~ 145 (397)
T 2bo4_A 72 LRPGKGDGMNTALRYFLEET---QWERIHFYDADITSFGPDWITKAEEAAD-F-GYGLVRHYFPR-ASTDAMITWMITRT 145 (397)
T ss_dssp SSSSHHHHHHHHHHHHHHHC---CCSEEEECCTTCSSCCHHHHHHHHHHHH-T-TCSEEEEECCC-CTTSCHHHHHTHHH
T ss_pred CCCCHHHHHHHHHHHHHHhC---CCCEEEEEcCCCCCCCHHHHHHHHHHHH-c-CCCEEEEEecc-ccCCcHHHHHHHHH
Confidence 567999999999 666 9999999999997 79999999999883 3 47777774221 11122222211 00
Q ss_pred hcccchhhhhhcccccCccccccCCcchhhHHHHHHhCCC----CCCCccchHHHHHHHHhCCCEEEEeccC
Q 044519 244 SLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGW----KDRTTVEDMDLAVRASLKGWKFVFVGDL 311 (534)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~----~~~~~~ED~~l~~rl~~~G~ki~~~~~~ 311 (534)
-....+...+.. ......++..++||++++++... .....+.|.++..++.++|+++..+|-.
T Consensus 146 ll~~~~~~~~~~-----~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVpig 212 (397)
T 2bo4_A 146 GFALLWPHTELS-----WIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIP 212 (397)
T ss_dssp HHHHHCTTSSGG-----GCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECT
T ss_pred HHHHHHHHhhcc-----ccccCCcccEEEeHHHHHHHhhhcccCcCCCcchHHHHHHHHHHcCCEEEEEECc
Confidence 000011111100 11111344558999999987321 2344567999999999999999998843
No 16
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.14 E-value=2.2e-10 Score=110.69 Aligned_cols=109 Identities=13% Similarity=-0.021 Sum_probs=77.3
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
...++|||||||||+.. +++++++|.+.+.++ |+|+|+|+|.+... .++++++++. .+.++.+++..
T Consensus 51 i~~klSIVVPvYNEe~~---lLesVl~qi~~d~eI-IlVdDGS~D~s~~e------~dil~~~~~~---~~~ri~viHQk 117 (391)
T 2wvl_A 51 VLEQTAIVVPTRNERLK---LLEGVLSGIPHEALI-LVASNSSPDRFQME------RDLLEEFAHL---TERPALIFHQK 117 (391)
T ss_dssp HHTTEEEEEEESSCCHH---HHHHHHHTSCTTSEE-EEEECCCHHHHHHH------HHHHHHHHHH---TTCCEEEEETT
T ss_pred HHhceEEEEeccCcHHH---HHHHHHhcCCCCceE-EEEECCCCCChHhH------HHHHHHHHhh---cccceEEEecc
Confidence 45789999999999964 699999999876443 33667788887430 0255555432 24567777531
Q ss_pred ---------------------CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHH
Q 044519 169 ---------------------NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 169 ---------------------~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l 210 (534)
..+.||+.++-.|+..|...++|||.|+|||...+.+..+.+
T Consensus 118 n~gls~Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyv 180 (391)
T 2wvl_A 118 DPALAEALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYV 180 (391)
T ss_dssp CHHHHHHHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHH
T ss_pred ChHHHHHHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHH
Confidence 122358888888998874458999999999999977766554
No 17
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=98.93 E-value=4.9e-09 Score=104.50 Aligned_cols=111 Identities=17% Similarity=0.113 Sum_probs=70.2
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHc-CCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACG-LSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN 169 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~-q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~ 169 (534)
.++||+||+|||++.+ +..+++ ..+ ..+ +|+|+|+|+|++-+ |....+++++.++.. .....+++.++
T Consensus 51 ~~iSVVIP~yNEE~~l---I~~vL~~i~~-~~e-IIvVDDgSrD~tD~---~~~~~~~l~~~~~~~---~~~~~Vl~~~~ 119 (394)
T 2zu9_A 51 GKMAVIVPMKNEKLHL---VDGVLKAIPH-KCP-IIIVSNSKREGPNR---YKLEVDLIRHFYNLT---HSKIIMIHQKD 119 (394)
T ss_dssp TTEEEEEEESSCCHHH---HHHHHHHSCT-TSC-EEEEECCCCSSSCH---HHHHHHHHHHHHHHH---CCCEEEEETTC
T ss_pred CCEEEEEecCcccHHH---HHHHHHcCCC-CcE-EEEEECcCcccccc---hhhHHHHHHHHhhcc---ccceEEEecCC
Confidence 4799999999999543 444433 233 233 44467778776622 000002454444432 23344444432
Q ss_pred ----------------------CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 170 ----------------------RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 170 ----------------------~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
++ ||..|+-.|+.+|...++|+|+++|||. ..|..+.+.+..+
T Consensus 120 p~v~~~~~~~g~~~il~~~~~~r~-GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy 184 (394)
T 2zu9_A 120 PGLAKAFKEVGYTDILDENGMIRS-GKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDY 184 (394)
T ss_dssp HHHHHHHHHHTCCTTBCTTSSBCC-SHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHH
T ss_pred cchhHHhhhccccccccccccccC-ChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHh
Confidence 24 6999999999887444899999999999 6788887777665
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=98.88 E-value=3.4e-09 Score=104.87 Aligned_cols=117 Identities=13% Similarity=0.092 Sum_probs=79.1
Q ss_pred CcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec--
Q 044519 91 PMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK-- 168 (534)
Q Consensus 91 P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~-- 168 (534)
+.++|+|++||.++ ++++|+|+++|+.+....+|+|.||+++++++ ++++++. .++.++..+
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~--------~vi~~~~-------~~I~~~~~~d~ 65 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETA--------QVIASYG-------SAVTHIRQPDL 65 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHH--------HHHHTTG-------GGSEEEECSCC
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHH--------HHHHHcC-------CceEEEEcCCc
Confidence 56899999999999 99999999999855444445567665544444 3554321 234444211
Q ss_pred ------CCCCCCh----------hHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHH---HHHHhcCCcEEEEeee
Q 044519 169 ------NRNGYKA----------GALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRT---IPYLLENKELGLVQAR 226 (534)
Q Consensus 169 ------~~~g~Ka----------~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l---v~~~~~~~~v~~V~~~ 226 (534)
+++.|-+ .++|.+++.+ ++|+++++|+|++++||+++.+ .+.+++|+.+.++++.
T Consensus 66 ~~~~~~~~N~g~~~y~~ia~h~~~al~~vf~~~---~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa~ 139 (343)
T 1fo8_A 66 SNIAVQPDHRKFQGYYKIARHYRWALGQIFHNF---NYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAW 139 (343)
T ss_dssp CCCCCCTTCGGGHHHHHHHHHHHHHHHHHHTTS---CCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESC
T ss_pred cccccchhhcCcccchhHhHHHHHHHHHHHHhc---cCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEecc
Confidence 1111111 3555556555 8999999999999999999655 4455678999888764
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=98.44 E-value=6.2e-07 Score=84.15 Aligned_cols=180 Identities=13% Similarity=0.111 Sum_probs=116.8
Q ss_pred CCcEEEEEeccCchHHHHHHHHHHH----cCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEE
Q 044519 90 YPMVLVQIPMYNEKEVYKLSIGAAC----GLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYE 165 (534)
Q Consensus 90 ~P~VsViIP~yne~~~l~~~L~sl~----~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~ 165 (534)
.-+|+||||-+|.++.+...|..+. +|.- ...|+|++...+..
T Consensus 50 ~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l---~y~I~VieQ~~~~~------------------------------ 96 (287)
T 3lw6_A 50 VHKMALLVPFRDRFEELLQFVPHMTAFLKRQGV---AHHIFVLNQVDRFR------------------------------ 96 (287)
T ss_dssp CCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC---EEEEEEEEECSSSC------------------------------
T ss_pred cceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCC---ceEEEEEecCCCCc------------------------------
Confidence 3489999999999988888876653 3532 34566666542211
Q ss_pred EecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhc
Q 044519 166 TRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSL 245 (534)
Q Consensus 166 ~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~ 245 (534)
-.++..+|.|+..| .++.|++++-|.|.+|..|.... ..|+. ....+...+.
T Consensus 97 ------FNRa~LlNvGf~ea-~~~~d~~ifHDVDLlP~dd~n~Y------~c~~~----~~P~Hls~~~----------- 148 (287)
T 3lw6_A 97 ------FNRASLINVGFQFA-SDVYDYIAMHDVDLLPLNDNLLY------EYPSS----LGPLHIAGPK----------- 148 (287)
T ss_dssp ------CCHHHHHHHHHHHS-CTTCCEEEEECTTEEECCTTSCC------CCCCT----TCCEESSCTT-----------
T ss_pred ------cchhheecccHHHH-hccCCEEEEecccccccCCCccc------cCCCC----CCceEEeecc-----------
Confidence 12777899999987 34689999999999986542110 01100 0111111100
Q ss_pred ccchhhhhhcccccCccccccCCcchhhHHHHHHhCCCCCCCc---cchHHHHHHHHhCCCEEEEeccC-c-----cc--
Q 044519 246 DYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT---VEDMDLAVRASLKGWKFVFVGDL-G-----VK-- 314 (534)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~-~-----~~-- 314 (534)
.++. .....+.|...+++++.+.++|||++... .||.|+..|+..+|.++...+.. . ..
T Consensus 149 -~~~~---------~~Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~ 218 (287)
T 3lw6_A 149 -LHPK---------YHYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHI 218 (287)
T ss_dssp -TCSS---------CCCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEEC
T ss_pred -ccCC---------CCcCCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCCccccceeEEecc
Confidence 0000 11233568999999999999999998655 79999999999999998766542 1 11
Q ss_pred c-------cCCcCHHHHHHHHhhhccchhhHHh
Q 044519 315 N-------ELPSTFKAYRYQQHRWSCGPSNLFS 340 (534)
Q Consensus 315 ~-------~~p~t~~~~~~Qr~RW~~G~~~~~~ 340 (534)
+ +.|..+.....++.||..+.+..++
T Consensus 219 hd~~~r~rd~~k~~~~~~~~~~r~~~dGLnsl~ 251 (287)
T 3lw6_A 219 HNRYHRKRDTQKCFNQKEMTRKRDHKTGLDNVK 251 (287)
T ss_dssp CCTTTSCCCCCCCTTHHHHHTSCCSSCSGGGCC
T ss_pred ccccccCCcccchhhhhhhhcEEccCCCCeeeE
Confidence 1 2234556667888999888876543
No 20
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=96.71 E-value=0.0027 Score=56.12 Aligned_cols=130 Identities=11% Similarity=0.055 Sum_probs=78.4
Q ss_pred hcCccEEEEEecCCCCCChhHHHHHHHhhh-ccCCcEEEEecCC---CCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecC
Q 044519 157 EKGVNVKYETRKNRNGYKAGALKEGLEKQY-VKDCQFVVIFDAD---FQPDEDFLWRTIPYLLENKELGLVQARWKFVNA 232 (534)
Q Consensus 157 ~~~~~v~~~~r~~~~g~Ka~aln~gl~~a~-~~~~d~v~~lDaD---~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~ 232 (534)
+.+..++.... ..--+.|+|..+.... ..++|+++++||| ...+|+.+.+++.. +.++|.|.......
T Consensus 23 ~~gi~~~l~~~---~SlI~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl~~-----g~DVV~GsYp~K~~ 94 (203)
T 2c0n_A 23 KNDIEYVILSR---RNHVAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKFNE-----GYDVVCGYYYLKTL 94 (203)
T ss_dssp HTTCCEEEECC---CSCHHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHHHH-----TCSEEEEECBCTTS
T ss_pred hCCCeEEEEcc---ccchHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHHhC-----CCCEEEEEeeccCC
Confidence 35677766644 3336677777776632 2478999999999 88899999998832 45566665433221
Q ss_pred CCchhhHhHhhhcccchhhhhhcccccCccccccCCcchhhHHHHHHhC--CC-------CCCCccchHHHHHHHHhCCC
Q 044519 233 DECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNGTAGVWRIQAIEDAG--GW-------KDRTTVEDMDLAVRASLKGW 303 (534)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G--g~-------~~~~~~ED~~l~~rl~~~G~ 303 (534)
+ . .+.. ...+... .. .......++.++++||++++.+- .| ..+..+||..++..+..+|+
T Consensus 95 ~-~-~s~~-----a~~y~~~--i~--~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~ 163 (203)
T 2c0n_A 95 R-G-YSVY-----RKDWEKE--IF--DGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTY 163 (203)
T ss_dssp S-S-BSEE-----SSSBCSS--CC--CEECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEE
T ss_pred C-c-cchH-----HHHHHHh--cc--CceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccc
Confidence 1 1 0000 0001000 00 01222345678899999999872 22 12456899999999998887
Q ss_pred EE
Q 044519 304 KF 305 (534)
Q Consensus 304 ki 305 (534)
.+
T Consensus 164 ~~ 165 (203)
T 2c0n_A 164 AL 165 (203)
T ss_dssp EE
T ss_pred cc
Confidence 76
No 21
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=95.62 E-value=0.065 Score=50.52 Aligned_cols=183 Identities=11% Similarity=0.091 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHHHH
Q 044519 104 EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLE 183 (534)
Q Consensus 104 ~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~gl~ 183 (534)
..+..+++.+.+.. -+++.| +.| ++.. ++.++++ +.++.+. .++..+|.++ +..+++
T Consensus 35 Pli~~~l~~l~~~~--i~~VvV-vt~---~~~i------------~~~~~~~---g~~v~~~-~~~~~~Gt~~-i~~a~~ 91 (256)
T 3tqd_A 35 PMIQHVYESAIKSG--AEEVVI-ATD---DKRI------------RQVAEDF---GAVVCMT-SSDHQSGTER-IAEAAV 91 (256)
T ss_dssp EHHHHHHHHHHHTT--CSEEEE-EES---CHHH------------HHHHHHT---TCEEEEC-CTTCCSHHHH-HHHHHH
T ss_pred hHHHHHHHHHHhCC--CCEEEE-ECC---HHHH------------HHHHHHc---CCeEEEe-CCCCCCcHHH-HHHHHH
Confidence 47888999887754 234433 443 2222 2333332 4555443 3333334444 566666
Q ss_pred hhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCcEEEEeeeeEeec----CCCchhhH-hHhhhcccchhhhhh--c
Q 044519 184 KQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKELGLVQARWKFVN----ADECLMTR-LQEMSLDYHFSVEQE--V 255 (534)
Q Consensus 184 ~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n----~~~~~~~~-~~~~~~~~~~~~~~~--~ 255 (534)
.....+.|.++++++|. ..+++.+.++++.+.++++.+++.......+ .+.+...- ...-.....|..... .
T Consensus 92 ~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~d~~g~~l~fsr~pip~~ 171 (256)
T 3tqd_A 92 ALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVLNRRNYALYFSHAPIPWG 171 (256)
T ss_dssp HTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEECTTSBEEEEESSCSSCC
T ss_pred HhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEECCCCEEeEEecCCCCCC
Confidence 53112579999999998 5689999999999865554433322221111 01111000 000000000100000 0
Q ss_pred cccc--------CccccccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEecc
Q 044519 256 GSST--------CQFFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFVGD 310 (534)
Q Consensus 256 ~~~~--------~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~~ 310 (534)
+... .....-+....+||+++++....++...+ .|..| ..|+..+|+++.....
T Consensus 172 r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~s~lE~~e~le-qlr~le~G~~i~~~~~ 235 (256)
T 3tqd_A 172 RDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLSWDACPAEKMEALE-QLRILWHGGRIHMVVA 235 (256)
T ss_dssp TTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCT-THHHHHTTCCCEEEEC
T ss_pred CcccccccccccCCcceEEEEEEEcCHHHHHHHHhCCCCcccchhhhH-HHHHHHCCCeEEEEEe
Confidence 0000 00111245578999999999876765432 23333 2577889999877653
No 22
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=94.61 E-value=0.26 Score=46.56 Aligned_cols=180 Identities=14% Similarity=0.095 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHHHH
Q 044519 104 EVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLE 183 (534)
Q Consensus 104 ~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~gl~ 183 (534)
..+..+++.+.+.. -++++| +.| ++..+ +.++++ +.++.+. ++...+|.++ +..+++
T Consensus 44 Pmi~~~l~~l~~~~--i~~IvV-~t~---~~~i~------------~~~~~~---g~~v~~~-~~~~~~Gt~~-i~~~~~ 100 (264)
T 3k8d_A 44 PMIVHVLERARESG--AERIIV-ATD---HEDVA------------RAVEAA---GGEVCMT-RADHQSGTER-LAEVVE 100 (264)
T ss_dssp EHHHHHHHHHHHTT--CSEEEE-EES---CHHHH------------HHHHHT---TCEEEEC-CTTCCSHHHH-HHHHHH
T ss_pred EHHHHHHHHHHhCC--CCEEEE-ECC---HHHHH------------HHHHHc---CCEEEEe-cCCCCCCHHH-HHHHHH
Confidence 37888999888764 244433 443 22222 233332 4444332 3333444444 555665
Q ss_pred hhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCc--EEEEeeeeEe----ecCCC-chh-h-HhHhhhcccchhh-h
Q 044519 184 KQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKE--LGLVQARWKF----VNADE-CLM-T-RLQEMSLDYHFSV-E 252 (534)
Q Consensus 184 ~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~--v~~V~~~~~~----~n~~~-~~~-~-~~~~~~~~~~~~~-~ 252 (534)
.....+.|+++++++|. ..+++.+.++++.+. +++ +.....+..- .|++. ... . ......+...-.. .
T Consensus 101 ~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~-~~~~~~~~~~~~v~d~~~~~~p~~vkVv~d~~g~~l~fsr~~ip~~ 179 (264)
T 3k8d_A 101 KCAFSDDTVIVNVQGDEPMIPATIIRQVADNLA-QRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWD 179 (264)
T ss_dssp HHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHH-TSSCSEEEEEEECCSHHHHTCTTSCEEEECTTSBEEEEESSCCSCC
T ss_pred HhccCCCCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCCEEEEEEEcCCHHHccCCCceEEEECCCCeEEEEecCCCCCC
Confidence 43112579999999998 559999999999984 433 3333332210 01100 000 0 0000000000000 0
Q ss_pred hhc----ccccCccccccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEe
Q 044519 253 QEV----GSSTCQFFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFV 308 (534)
Q Consensus 253 ~~~----~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~ 308 (534)
+.. ..........+....+||++.+++.-.++...+ .|..+. .|+..+|+++...
T Consensus 180 r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~~~lE~~e~leq-lr~le~G~~I~~~ 240 (264)
T 3k8d_A 180 RDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQ-LRVLWYGEKIHVA 240 (264)
T ss_dssp HHHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHHSCCCHHHHHHTCTT-HHHHHTTCCEEEE
T ss_pred CccccccccccCCcceEEEEEEEECHHHHHHHHhCCCChhhhHHHHHH-HHHHHCCCceEEE
Confidence 000 000001112356678999999999766654322 233332 4677899999875
No 23
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=93.96 E-value=0.17 Score=47.50 Aligned_cols=185 Identities=12% Similarity=0.116 Sum_probs=92.3
Q ss_pred CchHHHHHHH-HHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHH
Q 044519 101 NEKEVYKLSI-GAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALK 179 (534)
Q Consensus 101 ne~~~l~~~L-~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln 179 (534)
+....+..++ +++.+.. -++++| +.|+ +.+. +.+++ .+.++.+. ++...+|. +++.
T Consensus 24 ~GkPli~~~i~~~~~~~~--~~~vvV-vt~~---~~i~------------~~~~~---~g~~v~~~-~~~~~~Gt-~~i~ 80 (253)
T 4fcu_A 24 HDRPMILRVVDQAKKVEG--FDDLCV-ATDD---ERIA------------EICRA---EGVDVVLT-SADHPSGT-DRLS 80 (253)
T ss_dssp TTEEHHHHHHHHHHTCTT--CCEEEE-EESC---HHHH------------HHHHT---TTCCEEEC-CTTCCCHH-HHHH
T ss_pred CCeEhHHHHHHHHHHhcC--CCEEEE-ECCH---HHHH------------HHHHH---cCCeEEEe-CCCCCChH-HHHH
Confidence 3445788999 8887643 344433 4442 2222 23332 24444332 33333333 3566
Q ss_pred HHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCc--EEEEeeeeE----eecCCCc-hhhHh--Hhhhcccch
Q 044519 180 EGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKE--LGLVQARWK----FVNADEC-LMTRL--QEMSLDYHF 249 (534)
Q Consensus 180 ~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~--v~~V~~~~~----~~n~~~~-~~~~~--~~~~~~~~~ 249 (534)
.+++.....+.|+++++++|. ..+++.+.+++..+.++++ ++.+..+.. ..|++.- ....- ....+....
T Consensus 81 ~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~~~~~~~~p~~~kvv~d~~g~~l~fsr~~ 160 (253)
T 4fcu_A 81 EVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALYFSRAT 160 (253)
T ss_dssp HHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSCEEEECTTSBEEEEESSC
T ss_pred HHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcCCHHHccCCCccEEEECCCCeEEEecCCC
Confidence 777665112469999999998 6699999999999866654 333333211 1122110 00000 000000000
Q ss_pred hhhhhccccc-----CccccccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEec
Q 044519 250 SVEQEVGSST-----CQFFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFVG 309 (534)
Q Consensus 250 ~~~~~~~~~~-----~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~ 309 (534)
.......... ......+....+||++.+++...++...+ .|..+ ..|+.++|+++....
T Consensus 161 ip~~r~~~~~~~~~~~~~~~~~~GiY~f~~~~l~~~~~~~~~~le~~e~le-~lr~l~~G~~I~~~~ 226 (253)
T 4fcu_A 161 IPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMGKLEKLESLE-QLRVLENGHRIAIAV 226 (253)
T ss_dssp CSCCTTTSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCCHHHHHHTCT-THHHHHTTCCEEEEE
T ss_pred CCCCCCcccccccccccceeEEEEEEEeCHHHHHHHHhCCCCcccchhHHH-HHHHHHCCCceEEEE
Confidence 0000000000 01111255678999999999876654322 22222 235568899987654
No 24
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=93.46 E-value=0.29 Score=45.82 Aligned_cols=188 Identities=15% Similarity=0.089 Sum_probs=92.2
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|..+ ...+..+++++.+.. -++++| +.| ++ .+++.+++ .+.++.+. .++..+|.++
T Consensus 22 ~~i~G-kPli~~~l~~l~~~~--~~~ivV-v~~---~~------------~i~~~~~~---~g~~v~~~-~~~~~~Gt~~ 78 (252)
T 3oam_A 22 ADIGG-KPMIQWVYEQAMQAG--ADRVII-ATD---DE------------RVEQAVQA---FGGVVCMT-SPNHQSGTER 78 (252)
T ss_dssp CEETT-EEHHHHHHHHHHHTT--CSEEEE-EES---CH------------HHHHHHHH---TTCEEEEC-CTTCCSHHHH
T ss_pred eeECC-EEHHHHHHHHHHhCC--CCeEEE-ECC---HH------------HHHHHHHH---cCCEEEEc-CCCCCCcHHH
Confidence 34434 358889999988765 244433 443 22 22233333 24555443 3333344554
Q ss_pred HHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcC-CcEEEEeeeeE----eecCCCc-hhhH--hHhhhccc
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLEN-KELGLVQARWK----FVNADEC-LMTR--LQEMSLDY 247 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~-~~v~~V~~~~~----~~n~~~~-~~~~--~~~~~~~~ 247 (534)
+..+++.....+.|.++++++|. .++++.+.++++.+.++ .++.....+.. +.+++.. .... .....+..
T Consensus 79 -~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~~~~~~~~p~~g~vv~d~~g~v~~fsr 157 (252)
T 3oam_A 79 -LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSR 157 (252)
T ss_dssp -HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEECCHHHHTCTTSCEEEECTTSBEEEEES
T ss_pred -HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecCCHHHhhCCCceEEEECCCCeEEEEeC
Confidence 44455442112578999999998 56999999999988543 23444433321 1111000 0000 00000000
Q ss_pred chhhhhhcc----cc-cCccccccCCcchhhHHHHHHhCCCCCCCc--cchHHHHHHHHhCCCEEEEec
Q 044519 248 HFSVEQEVG----SS-TCQFFGFNGTAGVWRIQAIEDAGGWKDRTT--VEDMDLAVRASLKGWKFVFVG 309 (534)
Q Consensus 248 ~~~~~~~~~----~~-~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~ 309 (534)
....+.... .. .......+....+|+++.+++.-....... .|..+. .|+..+|.++...+
T Consensus 158 ~~i~~~~~~~~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~~~~~~e~~E~le~-lr~l~~G~~i~~~~ 225 (252)
T 3oam_A 158 ATIPWDRDNFAKADKAIVQPLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQ-LRVLWHGEKIHVAV 225 (252)
T ss_dssp SCSSCCHHHHHSSSCCCCSCEEEEEEEEEEETTHHHHHHHSCCCHHHHHHTCTT-HHHHHTTCCEEEEE
T ss_pred CCCCCCCCccccccccccccceEEEEEEEcCHHHHHHHHcCCCCcccccchhHH-HHHHHCCCeEEEEE
Confidence 000000000 00 011122456788999999998755543222 333332 35668899987753
No 25
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=92.51 E-value=1.3 Score=41.49 Aligned_cols=106 Identities=14% Similarity=0.076 Sum_probs=58.5
Q ss_pred CCCCcEEEEEeccCchHH---HHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEE
Q 044519 88 KSYPMVLVQIPMYNEKEV---YKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKY 164 (534)
Q Consensus 88 ~~~P~VsViIP~yne~~~---l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~ 164 (534)
+..|.|-||-|+|..... +.+.-..+ .+- |+ +.=+|++|+.+.+.. ..++++ + -+..-++
T Consensus 18 ~~~p~IivVTPTy~R~~Q~a~LtRLa~TL-~~V-p~--L~WIVVEd~~~~t~~------va~lL~----r---sGl~y~H 80 (281)
T 3cu0_A 18 GSHMTIYVVTPTYARLVQKAELVRLSQTL-SLV-PR--LHWLLVEDAEGPTPL------VSGLLA----A---SGLLFTH 80 (281)
T ss_dssp ---CEEEEEEEECCSTTHHHHHHHHHHHH-TTS-SS--EEEEEEESSSSCCHH------HHHHHH----H---HCSEEEE
T ss_pred CCCCeEEEEeCCCCCcchhHHHHHHHHHH-hcC-Cc--eEEEEEcCCCCCCHH------HHHHHH----H---cCCceEE
Confidence 578999999999999733 33333333 322 43 444466664432222 002433 2 2555555
Q ss_pred EEecCCCCCC-------------hhHHHHHHHhhh--------cc------CCcEEEEecCCCCCCHHHHHHH
Q 044519 165 ETRKNRNGYK-------------AGALKEGLEKQY--------VK------DCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 165 ~~r~~~~g~K-------------a~aln~gl~~a~--------~~------~~d~v~~lDaD~~~~pd~L~~l 210 (534)
+.-..+...| ..++|.|++... .. ..-+|.|.|+|...+-+..+++
T Consensus 81 L~~~~p~~~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdem 153 (281)
T 3cu0_A 81 LVVLTPKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 153 (281)
T ss_dssp EECCCC-----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred eccCCCccccccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHh
Confidence 5333222211 467899998873 11 2358899999999998887764
No 26
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=91.74 E-value=1.7 Score=40.00 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=60.0
Q ss_pred CCcEEEEEeccCchH---HHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 90 YPMVLVQIPMYNEKE---VYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 90 ~P~VsViIP~yne~~---~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
.|.|-+|-|+|.... .+.+.-..+. +- |+ +.=+|++|+.+.+. .+.+..+ .-|..-+++.
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~-~V-p~--l~WIVVEd~~~~~~----------~v~~lL~---~sgl~y~HL~ 64 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTRLANTFR-QV-AQ--LHWILVEDAAARSE----------LVSRFLA---RAGLPSTHLH 64 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHHHHHHHT-TS-TT--EEEEEEESSSSCCH----------HHHHHHH---HSCSCEEEEE
T ss_pred CCEEEEEeCCCCccchhHHHHHHHHHHh-cC-Cc--eEEEEEcCCCCCCH----------HHHHHHH---HcCCceEEEe
Confidence 688999999999973 3344333333 22 44 44446665443221 2222222 2355555554
Q ss_pred ecCCCCC-------ChhHHHHHHHhhhcc------CCcEEEEecCCCCCCHHHHHHH
Q 044519 167 RKNRNGY-------KAGALKEGLEKQYVK------DCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 167 r~~~~g~-------Ka~aln~gl~~a~~~------~~d~v~~lDaD~~~~pd~L~~l 210 (534)
-+.+... -..++|.|++..... ..-+|.|.|+|...+-+...++
T Consensus 65 ~~~~~~~~~~~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~em 121 (246)
T 2d0j_A 65 VPTPRRYKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEM 121 (246)
T ss_dssp CCCCCC----CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHH
T ss_pred cCCccccCCCCCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHH
Confidence 3321111 236789999775322 2468899999999998877764
No 27
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=91.18 E-value=0.63 Score=44.22 Aligned_cols=116 Identities=10% Similarity=0.055 Sum_probs=70.6
Q ss_pred CCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEE-cCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe
Q 044519 89 SYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVL-DDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR 167 (534)
Q Consensus 89 ~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~-Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r 167 (534)
.....|++|-+|+..+.+.+.++.+.+..+- . +|+|+ .+..++..+ ... .........++++..
T Consensus 26 ~~~~FTvvi~ty~R~~~L~~lv~~~~~~~~v--~-~IvVvWn~~~~~pp~--------~~~----~~~~~~~vpv~v~~~ 90 (293)
T 1omz_A 26 ALDSFTLIMQTYNRTDLLLRLLNHYQAVPSL--H-KVIVVWNNVGEKGPE--------ELW----NSLGPHPIPVIFKPQ 90 (293)
T ss_dssp CTTCEEEEEEESSCHHHHHHHHHHHTTSTTE--E-EEEEEECCTTCCCTH--------HHH----HHTCCCSSCEEEEEC
T ss_pred CCCceEEEEEeecccHHHHHHHHHHhcCCCC--C-eEEEEeCCCCCCCCh--------hhc----cccCCCCccEEEEeC
Confidence 3458999999999989999999888665432 2 23344 443222222 111 111122356766633
Q ss_pred cCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeee
Q 044519 168 KNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQAR 226 (534)
Q Consensus 168 ~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~ 226 (534)
..+ .-.++-.-.... +.|-|+.+|+|..++.+.|+.......++|+- +|+-.
T Consensus 91 -~~n--sLnnRF~p~~~i---~T~AVLslDDDv~l~~~el~faF~vWr~~PdR-lVGf~ 142 (293)
T 1omz_A 91 -TAN--KMRNRLQVFPEV---ETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQ-IIGFV 142 (293)
T ss_dssp -SSC--CGGGGGSCCTTC---CSSEEEEECTTEEECHHHHHHHHHHHTTSTTS-EEESC
T ss_pred -CCC--chhhccCCCccC---CcCEEEEEcCCCCCCHHHHHHHHHHHHHCccc-eecCc
Confidence 222 111221122333 89999999999999999999988888778873 44433
No 28
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=90.77 E-value=1.3 Score=40.83 Aligned_cols=104 Identities=15% Similarity=0.091 Sum_probs=59.2
Q ss_pred CCcEEEEEeccCchH---HHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEE
Q 044519 90 YPMVLVQIPMYNEKE---VYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYET 166 (534)
Q Consensus 90 ~P~VsViIP~yne~~---~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~ 166 (534)
.|.|-+|-|+|.... .+.+.-..+ .+ -|+ +.=+|++|+.+.+.. ..++++ + -|..-+++.
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL-~~-Vp~--L~WIVVEd~~~~t~~------va~lL~----~---sgl~y~HL~ 64 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTL-LH-VPN--LHWLVVEDAPRRTPL------TARLLR----D---TGLNYTHLH 64 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHH-TT-SSS--EEEEEEESSSSCCHH------HHHHHH----H---HCCEEEEEE
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhh-cc-CCc--eEEEEEeCCCCCCHH------HHHHHH----H---cCCceEEee
Confidence 689999999999973 344444444 22 254 444466654432222 002433 2 255545553
Q ss_pred ecCC----------CCC---ChhHHHHHHHhhhc------cCCcEEEEecCCCCCCHHHHHHH
Q 044519 167 RKNR----------NGY---KAGALKEGLEKQYV------KDCQFVVIFDADFQPDEDFLWRT 210 (534)
Q Consensus 167 r~~~----------~g~---Ka~aln~gl~~a~~------~~~d~v~~lDaD~~~~pd~L~~l 210 (534)
-+.+ +.. -...+|.|++.... ...-+|.|.|+|...+-+..+++
T Consensus 65 ~~~p~~~~~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~em 127 (253)
T 1v84_A 65 VETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEM 127 (253)
T ss_dssp CCCCHHHHCC-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHH
T ss_pred cCCCccccccccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHH
Confidence 3211 000 13478999987632 13468899999999999887774
No 29
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=84.90 E-value=5.3 Score=36.19 Aligned_cols=89 Identities=10% Similarity=0.048 Sum_probs=54.2
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEe-cCCCCCChhHHHH
Q 044519 102 EKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETR-KNRNGYKAGALKE 180 (534)
Q Consensus 102 e~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r-~~~~g~Ka~aln~ 180 (534)
....++.+++++.+. . +++.| +.++ + ... +.+++ . +.++.. +...+|.+++. .
T Consensus 26 g~pli~~~l~~~~~~--~-~~i~v-~~~~--~-~i~------------~~~~~----~--~~~~~~~~~~~~g~~~~~-~ 79 (234)
T 2y6p_A 26 GKPLIRWVVEGLVKT--G-ERVIL-ATDS--E-RVK------------EVVED----L--CEVFLTPSDLPSGSDRVL-Y 79 (234)
T ss_dssp TEEHHHHHHHHHHTT--T-SCEEE-EESC--H-HHH------------HHHTT----T--SEEEECCTTCCSHHHHHH-H
T ss_pred CEEHHHHHHHHHHHh--C-CEEEE-ECCh--H-HHH------------HHHHh----c--eEEEECCcccccchHHHH-H
Confidence 347889999999876 2 34433 4433 2 222 22222 1 233322 22344466555 4
Q ss_pred HHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCc
Q 044519 181 GLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKE 219 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~ 219 (534)
+++.. +.|+++++++|. ..+++.+.++++.+.++++
T Consensus 80 ~~~~~---~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 116 (234)
T 2y6p_A 80 VVRDL---DVDLIINYQGDEPFVYEEDIKLIFRELEKGER 116 (234)
T ss_dssp HHTTC---CCSEEEECCTTCCCCCHHHHHHHHHHHHHTCS
T ss_pred HHHhC---CCCEEEEecCCcCcCCHHHHHHHHHHHHhCCC
Confidence 56554 679999999999 8899999999988754444
No 30
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=83.08 E-value=12 Score=34.41 Aligned_cols=100 Identities=14% Similarity=0.059 Sum_probs=59.2
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
+....+..+++++.+.... +++.| |++....+ .+++..+++. ....+.++. . ..+..+++..
T Consensus 30 ~Gkpll~~~l~~~~~~~~~-~~ivv-v~~~~~~~------------~~~~~~~~~~-~~~~~~~~~-~--~~~~~~sv~~ 91 (246)
T 3f1c_A 30 NGKPIIVHTVEKFILNTRF-DKILI-SSPKEWMN------------HAEDNIKKYI-SDDRIVVIE-G--GEDRNETIMN 91 (246)
T ss_dssp TTEEHHHHHHHHHHTCTTC-SEEEE-EECGGGHH------------HHHHHHHHHC-CCTTEEEEE-C--CSSHHHHHHH
T ss_pred CCeeHHHHHHHHHHcCCCC-CEEEE-EeCHHHHH------------HHHHHHHHhC-CCCCEEEEC-C--CCchHHHHHH
Confidence 3447899999999876432 34433 44432111 1222223331 122454442 1 1235677888
Q ss_pred HHHhhhc----cCCcEEEEecCCC-CCCHHHHHHHHHHHhcCC
Q 044519 181 GLEKQYV----KDCQFVVIFDADF-QPDEDFLWRTIPYLLENK 218 (534)
Q Consensus 181 gl~~a~~----~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~ 218 (534)
|++.... .+.|+++++|+|. .++++.+.++++.+.+++
T Consensus 92 al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~ 134 (246)
T 3f1c_A 92 GIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETG 134 (246)
T ss_dssp HHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTS
T ss_pred HHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcC
Confidence 8876521 1368999999996 669999999999885543
No 31
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=82.55 E-value=27 Score=31.36 Aligned_cols=40 Identities=18% Similarity=0.091 Sum_probs=31.0
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcC
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLEN 217 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~ 217 (534)
+++..|++.. .+.|.++++++|.- .+++.+.++++.+.++
T Consensus 83 ~~v~~al~~~--~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~ 123 (229)
T 1qwj_A 83 DAIVEFLNYH--NEVDIVGNIQATSPCLHPTDLQKVAEMIREE 123 (229)
T ss_dssp HHHHHHHTTC--TTCSEEEEECTTCTTCCHHHHHHHHHHHHSS
T ss_pred HHHHHHHHhc--CCCCEEEEecCCCCcCCHHHHHHHHHHHHhC
Confidence 5667777654 35799999999985 5899999999987444
No 32
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=82.37 E-value=4.8 Score=35.28 Aligned_cols=91 Identities=18% Similarity=0.129 Sum_probs=54.0
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
+....++.+++.+.+.. -+++.| |.+.. ++... +.+. ..++.++..+....|-.+++..
T Consensus 29 ~g~pll~~~l~~l~~~~--~~~i~v-v~~~~-~~~~~------------~~~~-----~~~~~~~~~~~~~~g~~~~i~~ 87 (197)
T 2wee_A 29 RDTTVLGATLDVARQAG--FDQLIL-TLGGA-ASAVR------------AAMA-----LDGTDVVVVEDVERGCAASLRV 87 (197)
T ss_dssp TTEEHHHHHHHHHHHTT--CSEEEE-EECTT-HHHHH------------HHSC-----CTTSEEEECC----CCHHHHHH
T ss_pred CCccHHHHHHHHHHhcC--CCcEEE-EeCCC-HHHHH------------HHhc-----cCCCEEEECCCcccCHHHHHHH
Confidence 34478899999997754 234333 44332 22222 2211 1234444333222357788888
Q ss_pred HHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHH
Q 044519 181 GLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPY 213 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~ 213 (534)
|++.. ..+.|.++++++|. .++++.++++++.
T Consensus 88 al~~~-~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 88 ALARV-HPRATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp HHTTS-CTTEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred HHHHh-cccCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 88764 11468999999998 5699999999887
No 33
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=82.13 E-value=3.6 Score=36.45 Aligned_cols=40 Identities=23% Similarity=0.150 Sum_probs=32.3
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHH
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYL 214 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~ 214 (534)
|-.+++..|++.. .+.|.++++++|. .++++.+.++++.+
T Consensus 72 G~~~si~~al~~~--~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 72 GISTSLKLGLRFF--KDYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp CHHHHHHHHHHHT--TTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhh--ccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 4677888888876 2248999999998 56999999998876
No 34
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=80.88 E-value=6.4 Score=40.60 Aligned_cols=112 Identities=20% Similarity=0.121 Sum_probs=66.4
Q ss_pred EEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCCh
Q 044519 96 QIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKA 175 (534)
Q Consensus 96 iIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka 175 (534)
++|+.|.+ .|...|+++.+... .++.| |+ +...+.++ +.+.+..++ .+.++.|...+++.| -+
T Consensus 34 l~pv~gkp-~i~~~l~~~~~~g~--~~i~v-v~-~~~~~~i~--------~~~~~~~~~---~~~~i~~~~q~~~lG-Ta 96 (501)
T 3st8_A 34 LHTLAGRS-MLSHVLHAIAKLAP--QRLIV-VL-GHDHQRIA--------PLVGELADT---LGRTIDVALQDRPLG-TG 96 (501)
T ss_dssp GCEETTEE-HHHHHHHHHHHHCC--SEEEE-EE-CTTHHHHH--------HHHHHHHHH---HTSCCEEEECSSCCC-HH
T ss_pred HeEECChh-HHHHHHHHHHhCCC--CEEEE-Ee-CCCHHHHH--------HHHHHHHHh---cCCcEEEEEcCCCCC-cH
Confidence 57888875 78888888877542 34433 33 33233333 233322222 367788886665555 89
Q ss_pred hHHHHHHHhhhccCCcEEEEecCC-CCCCHHHHHHHHHHHhcCC-cEEEEe
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDAD-FQPDEDFLWRTIPYLLENK-ELGLVQ 224 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD-~~~~pd~L~~lv~~~~~~~-~v~~V~ 224 (534)
+|+..+.+.......+.++++.+| .+.+++.+.+++....++. ++.+..
T Consensus 97 ~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~ 147 (501)
T 3st8_A 97 HAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLT 147 (501)
T ss_dssp HHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEee
Confidence 999998887522222355555555 5668999999988764333 343433
No 35
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=79.57 E-value=12 Score=32.59 Aligned_cols=91 Identities=13% Similarity=0.037 Sum_probs=55.5
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
+....++.+++.+.+.. -+++.| |.+.. ++..+ +.+++ .++.++..+....|-.+++..
T Consensus 29 ~g~pli~~~l~~l~~~~--~~~i~v-v~~~~-~~~~~------------~~~~~-----~~~~~~~~~~~~~g~~~~i~~ 87 (199)
T 2waw_A 29 GDTTLLGATLAMARRCP--FDQLIV-TLGGA-ADEVL------------EKVEL-----DGLDIVLVDDAGLGCSSSLKS 87 (199)
T ss_dssp TTEEHHHHHHHHHHTSS--CSEEEE-EECTT-HHHHH------------HHSCC-----TTSEEEECCCCCTTCCCHHHH
T ss_pred CccCHHHHHHHHHHhCC--CCcEEE-EeCCC-HHHHH------------HHhcc-----CCCEEEECCCcccCHHHHHHH
Confidence 34478999999998764 234333 44332 22222 22111 223444323223356788999
Q ss_pred HHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHH
Q 044519 181 GLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPY 213 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~ 213 (534)
|++.. ..+.|.++++++|.-. +++.+.++++.
T Consensus 88 al~~~-~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 88 ALTWV-DPTAEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp HHHTS-CTTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred HHHhh-hccCCeEEEEeCCcccCCHHHHHHHHhh
Confidence 98875 1246899999999864 89999999887
No 36
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=79.42 E-value=26 Score=31.76 Aligned_cols=91 Identities=11% Similarity=0.041 Sum_probs=53.9
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec-CCCCCChhHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK-NRNGYKAGALK 179 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~-~~~g~Ka~aln 179 (534)
+....+..+++.+.+.... +++.| +.++ +... +.++++ + +.++..+ +..+|-+++ .
T Consensus 25 ~g~pli~~~i~~~~~~~~~-~~ivv-v~~~---~~i~------------~~~~~~---~--~~~~~~~~~~~~g~~~~-~ 81 (245)
T 1h7e_A 25 VGKPMIQHVYERALQVAGV-AEVWV-ATDD---PRVE------------QAVQAF---G--GKAIMTRNDHESGTDRL-V 81 (245)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CEEEE-EESC---HHHH------------HHHHHT---T--CEEEECCSCCSSHHHHH-H
T ss_pred CCchHHHHHHHHHHhCCCC-CeEEE-ECCc---HHHH------------HHHHHc---C--CeEEeCCCccCCcHHHH-H
Confidence 3456889999999876432 34433 4443 2222 222221 3 3444332 223334443 3
Q ss_pred HHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcC
Q 044519 180 EGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLEN 217 (534)
Q Consensus 180 ~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~ 217 (534)
.+++.. +.|.++++++|.- .+++.+.++++.+.++
T Consensus 82 ~~~~~~---~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 117 (245)
T 1h7e_A 82 EVMHKV---EADIYINLQGDEPMIRPRDVETLLQGMRDD 117 (245)
T ss_dssp HHHHHS---CCSEEEECCTTCTTCCHHHHHHHHHHHHHC
T ss_pred HHHHhC---CCCEEEEEcCCcCcCCHHHHHHHHHHHHhC
Confidence 455554 6799999999985 5899999999887544
No 37
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=79.30 E-value=1.2 Score=42.29 Aligned_cols=109 Identities=10% Similarity=0.010 Sum_probs=64.5
Q ss_pred cCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEeecCCCchhhHhHhhhcccchhhhhhcccccCccccccC
Q 044519 188 KDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFVNADECLMTRLQEMSLDYHFSVEQEVGSSTCQFFGFNG 267 (534)
Q Consensus 188 ~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 267 (534)
.+.+|++..|+|+.+..+-|.+++..+ |++-...-|......+.. ..+.... . ........++..|
T Consensus 92 ~~~~Wf~~~DDDtyv~~~nL~~~L~~~--d~~~~~YiG~~~~~~~~~-------~~~~~~~----~-~~~~~~~~y~~GG 157 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVNPKALLQLLKTF--PQDRDVYVGKPSLNRPIH-------ASELQSK----Q-RTKLVRFWFATGG 157 (280)
T ss_dssp HTCSEEEEEETTEEECHHHHHHHHTTS--CTTSCCEEECEEC-------------------------------CCEECGG
T ss_pred CCCcEEEEeCCCcEEcHHHHHHHHHhC--CCCCCEEEEEeccCcccc-------ccccCcc----c-cccccccCcccCC
Confidence 489999999999999999999998876 444333333322111000 0000000 0 0000112344568
Q ss_pred CcchhhHHHHHHhCCC-------C---CCCccchHHHHHHHH-hCCCEEEEecc
Q 044519 268 TAGVWRIQAIEDAGGW-------K---DRTTVEDMDLAVRAS-LKGWKFVFVGD 310 (534)
Q Consensus 268 ~~~~~Rr~~l~~~Gg~-------~---~~~~~ED~~l~~rl~-~~G~ki~~~~~ 310 (534)
++.++.|++++++-.+ . .....||..++.-+. +.|-+....+.
T Consensus 158 aG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~ 211 (280)
T 2j0a_A 158 AGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPL 211 (280)
T ss_dssp GCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTT
T ss_pred CEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceeccc
Confidence 8999999999886321 1 112358999999998 88988877654
No 38
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=78.96 E-value=4.4 Score=36.04 Aligned_cols=38 Identities=8% Similarity=0.021 Sum_probs=32.9
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHH
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPY 213 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~ 213 (534)
|-.+++..|++.. +.|+++++++|. .++++.++++++.
T Consensus 78 G~~~si~~~l~~~---~~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 78 GPLAGMLSVMQQE---AGEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp SHHHHHHHHHHHC---CSSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred CHHHHHHHHHHhC---CCCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 5778888999887 789999999998 5699999998876
No 39
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=77.34 E-value=5.5 Score=37.20 Aligned_cols=95 Identities=12% Similarity=-0.016 Sum_probs=57.2
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHH
Q 044519 102 EKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEG 181 (534)
Q Consensus 102 e~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~g 181 (534)
....++.+++++.+.. -+++.| +.+....+... +...+....+.++.+... ....|-++++..+
T Consensus 54 g~pli~~~l~~l~~~g--~~~iiv-v~~~~~~~~~~------------~~~~~~~~~~~~i~~~~~-~~~~G~~~al~~a 117 (269)
T 4ecm_A 54 RYPMIYHAVYKLKQCD--ITDIMI-ITGKEHMGDVV------------SFLGSGQEFGVSFTYRVQ-DKAGGIAQALGLC 117 (269)
T ss_dssp TEEHHHHHHHHHHHTT--CCEEEE-EECTTTHHHHH------------HHHTTSGGGTCEEEEEEC-SSCCCHHHHHHTT
T ss_pred CEEHHHHHHHHHHHCC--CCEEEE-ECChhhHHHHH------------HHHhhccccCceEEEeeC-CccCcHHHHHHHH
Confidence 4467899999998764 234433 44432212222 222211112455666533 3344577888888
Q ss_pred HHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhc
Q 044519 182 LEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLE 216 (534)
Q Consensus 182 l~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~ 216 (534)
.+.. +.|.++++.+|.... ..+.++++.+.+
T Consensus 118 ~~~~---~~~~~lv~~~D~~~~-~~l~~l~~~~~~ 148 (269)
T 4ecm_A 118 EDFV---GNDRMVVILGDNIFS-DDIRPYVEEFTN 148 (269)
T ss_dssp HHHH---TTSEEEEEETTEEES-SCSHHHHHHHHT
T ss_pred HHhc---CCCcEEEEeCCccCc-cCHHHHHHHHHh
Confidence 8776 578999999998776 567778777643
No 40
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=75.05 E-value=3.9 Score=38.48 Aligned_cols=55 Identities=13% Similarity=-0.048 Sum_probs=40.9
Q ss_pred CccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHH----HHHHHHHHHhcC
Q 044519 159 GVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDED----FLWRTIPYLLEN 217 (534)
Q Consensus 159 ~~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd----~L~~lv~~~~~~ 217 (534)
+.++.+...+. ..|-++++..+.+.. +.|.++++.+|...+++ .+.++++.+.+.
T Consensus 94 ~~~i~~~~~~~-~~Gt~~al~~a~~~l---~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~ 152 (281)
T 3juk_A 94 KCCFSYVRQKQ-MKGLGHAILTGEALI---GNEPFAVILADDLCISHDHPSVLKQMTSLYQKY 152 (281)
T ss_dssp HCEEEEEECSS-CCCHHHHHHHTHHHH---CSSCEEEECTTEEEECTTSCCHHHHHHHHHHHH
T ss_pred CccEEEEecCC-CCCcHHHHHHHHHHc---CCCCEEEEeCCeeccCccchHHHHHHHHHHHHc
Confidence 35566664433 334788898888876 56889999999988888 899999877443
No 41
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=74.08 E-value=25 Score=33.42 Aligned_cols=96 Identities=15% Similarity=0.140 Sum_probs=58.3
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCc-cEEEEEecCCCCCCh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGV-NVKYETRKNRNGYKA 175 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~-~v~~~~r~~~~g~Ka 175 (534)
+|..+....+..+++.+.+. . .++.| +.+....+ .+++...+. .+. ++.++..+ ...|-+
T Consensus 31 l~i~gg~pli~~~l~~l~~~-~--~~i~v-v~~~~~~~------------~i~~~~~~~--~~~~~~~~i~~~-~~~gt~ 91 (308)
T 2qh5_A 31 LKLFDHKSLFELSFKRNASL-V--DETLI-VCNEKHYF------------LALEEIKNE--IKNKSVGFLLES-LSKNTA 91 (308)
T ss_dssp CTTBTTBCHHHHHHHHHHTT-C--SEEEE-EEEGGGHH------------HHHHHTTTT--CSSCEEEEEEES-SCCCHH
T ss_pred EECCCCCCHHHHHHHHHHcc-C--CCEEE-EEChhHHH------------HHHHHHHHh--hCCCccEEEeCC-CCCChH
Confidence 55544567899999999876 2 34444 44432111 222222220 133 45566433 334578
Q ss_pred hHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHH
Q 044519 176 GALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPY 213 (534)
Q Consensus 176 ~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~ 213 (534)
+++..+.... ...++++++.+|... +++.+.++++.
T Consensus 92 ~al~~a~~~l--~~~~~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 92 NAIALSALMS--DKEDLLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp HHHHHHHHTS--CTTSEEEEEESSCBCCCHHHHHHHHHH
T ss_pred HHHHHHHHHh--CCCCeEEEEcCCccccCHHHHHHHHHH
Confidence 8888887765 235689999999987 78888888875
No 42
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=73.93 E-value=14 Score=33.04 Aligned_cols=85 Identities=6% Similarity=-0.020 Sum_probs=53.1
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
+....++.+++.+.+. +++ |+-+. ++..+ ...+. .++.++.......|...++..
T Consensus 24 ~G~pli~~~~~~l~~~-----~vv--vv~~~-~~~~~------------~~~~~-----~~~~~v~d~~~~~G~~~si~~ 78 (208)
T 3ngw_A 24 CGKKLIEWVLEKYSPF-----QTV--FVCRD-EKQAE------------KLSSR-----YEAEFIWDLHKGVGSIAGIHA 78 (208)
T ss_dssp TTEEHHHHHHHHHTTS-----EEE--EECSS-HHHHH------------HHHTT-----SCSCEECCTTCCCSHHHHHHH
T ss_pred CCeeHHHHHHHHhcCC-----CEE--EEECC-HHHHH------------HHHHh-----cCCeEEecCCCCCChHHHHHH
Confidence 5567899999998765 333 33332 22122 11111 233444333233346678888
Q ss_pred HHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHh
Q 044519 181 GLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLL 215 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 215 (534)
|++.+ .|++ ++++|. .++++.+.+++..+.
T Consensus 79 gl~~~----~~~v-v~~~D~P~i~~~~i~~l~~~~~ 109 (208)
T 3ngw_A 79 ALRHF----GSCV-VAAIDMPFVKPEVLEHLYKEGE 109 (208)
T ss_dssp HHHHH----SSEE-EEETTCTTCCHHHHHHHHHHHH
T ss_pred HHHHc----CCCE-EEECCccCCCHHHHHHHHHHhh
Confidence 88875 6899 999997 459999999999874
No 43
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=73.44 E-value=16 Score=32.85 Aligned_cols=41 Identities=7% Similarity=0.071 Sum_probs=31.7
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHh
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLL 215 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~ 215 (534)
...++..|++.. ..+.|.++++++|.- .+++.+.+++..+.
T Consensus 82 ~~~sv~~~l~~~-~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~ 123 (228)
T 1ezi_A 82 SISGVIHALETI-GSNSGTVTLLQPTSPLRTGAHIREAFSLFD 123 (228)
T ss_dssp HHHHHHHHHHHH-TCCSEEEEECCTTCTTCCHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHh-CCCCCEEEEEcCCCCcCCHHHHHHHHHHHH
Confidence 466777888775 124689999999974 58999999988773
No 44
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=72.38 E-value=13 Score=37.61 Aligned_cols=101 Identities=17% Similarity=0.203 Sum_probs=60.2
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|.-+ ...++.+++++.+.. -+++.| +.... ++..+ +.+++ .++.++..+ ...|-++
T Consensus 31 ~~i~g-~pli~~~l~~l~~~~--~~~i~v-v~~~~-~~~i~------------~~~~~-----~~~~~v~~~-~~~g~~~ 87 (459)
T 4fce_A 31 HPLAG-KPMVQHVIDAAMKLG--AQHVHL-VYGHG-GELLK------------KTLAD-----PSLNWVLQA-EQLGTGH 87 (459)
T ss_dssp SEETT-EEHHHHHHHHHHHHT--CSCEEE-EESSC-HHHHH------------HHC----------CEEECS-SCCCHHH
T ss_pred CeeCC-eeHHHHHHHHHHhCC--CCcEEE-EeCCC-HHHHH------------HHhcc-----CCcEEEeCC-CCCCcHH
Confidence 34433 468899999987764 234433 44322 22222 22221 234555433 3334678
Q ss_pred HHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcCCcEEEE
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLENKELGLV 223 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~v~~V 223 (534)
++..|++.. .+.|.++++++|. ..+++.++++++.+ .+.+..+.
T Consensus 88 ~i~~~~~~~--~~~~~~lv~~~D~P~i~~~~i~~l~~~~-~~~~~~~~ 132 (459)
T 4fce_A 88 AMQQAAPHF--ADDEDILMLYGDVPLISVDTLQRLLAAK-PEGGIGLL 132 (459)
T ss_dssp HHHHHGGGS--CTTSEEEEEETTCTTCCHHHHHHHHHHC-CTTSEEEE
T ss_pred HHHHHHHhc--CCCCcEEEEeCCcccCCHHHHHHHHHHH-hhCCEEEE
Confidence 888888876 2358999999998 57999999999987 33344333
No 45
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=71.05 E-value=33 Score=31.10 Aligned_cols=93 Identities=10% Similarity=0.095 Sum_probs=54.4
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
+....+..+++++.+.... ++++| |.+....+ .+++.+. . .+.++. . ......++..
T Consensus 33 ~Gkpll~~~l~~~~~~~~~-~~ivV-v~~~~~~~------------~~~~~~~----~--~v~~v~-g--g~~r~~sv~~ 89 (231)
T 3q80_A 33 DGQTLIERAVDGLLDSGVV-DTVVV-AVPADRTD------------EARQILG----H--RAMIVA-G--GSNRTDTVNL 89 (231)
T ss_dssp TTEEHHHHHHHHHHHTSCC-CEEEE-EECGGGHH------------HHHHHHG----G--GCEEEE-C--CSSHHHHHHH
T ss_pred CCeEHHHHHHHHHHhCCCC-CeEEE-ECChHHHH------------HHHHHhc----C--CeEEEc-C--CCchHHHHHH
Confidence 4456899999999765322 34333 44432111 1112221 1 344442 1 1123567788
Q ss_pred HHHhhhc-cCCcEEEEecCCC-CCCHHHHHHHHHHHhc
Q 044519 181 GLEKQYV-KDCQFVVIFDADF-QPDEDFLWRTIPYLLE 216 (534)
Q Consensus 181 gl~~a~~-~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~ 216 (534)
|++.... .+.|++++.|+|. .++++.+.+++..+.+
T Consensus 90 gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 90 ALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp HHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred HHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 8887611 0158999999995 4599999999998844
No 46
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=71.02 E-value=13 Score=32.73 Aligned_cols=47 Identities=9% Similarity=0.024 Sum_probs=34.7
Q ss_pred EEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHH-HH
Q 044519 162 VKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWR-TI 211 (534)
Q Consensus 162 v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~-lv 211 (534)
+.++..+....|-.+++..|++.. +.|.++++++|.-. +++.+++ ++
T Consensus 72 ~~~v~~~~~~~g~~~~i~~al~~~---~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 72 APVVLDEFEESASIIGLYTALKHA---KEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp CCEEECCCSSCCHHHHHHHHHHHC---SSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred ceEEecCCCCCCcHHHHHHHHHHc---CCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 334433333345788899999887 68999999999854 8988888 76
No 47
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=70.00 E-value=44 Score=30.59 Aligned_cols=92 Identities=17% Similarity=0.143 Sum_probs=52.1
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec-CCCCCChhHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK-NRNGYKAGALK 179 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~-~~~g~Ka~aln 179 (534)
+....+..+++++.+... +++.| +.++ + ... +.++++ +. .++.++ ...+|.+ .+.
T Consensus 25 ~gkpli~~~l~~l~~~~~--~~ivv-v~~~--~-~i~------------~~~~~~---~~--~~~~~~~~~~~g~~-~~~ 80 (262)
T 1vic_A 25 KGKPMIQHVFEKALQSGA--SRVII-ATDN--E-NVA------------DVAKSF---GA--EVCMTSVNHNSGTE-RLA 80 (262)
T ss_dssp TTEEHHHHHHHHHHHTTC--SEEEE-EESC--H-HHH------------HHHHHT---TC--EEEECCCSSCCHHH-HHH
T ss_pred CCeEHHHHHHHHHHhCCC--ceEEE-ECCc--H-HHH------------HHHHhc---CC--EEEECCccccCChH-HHH
Confidence 344788999999987653 34433 4432 2 122 222221 33 334332 2333343 344
Q ss_pred HHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhc
Q 044519 180 EGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLE 216 (534)
Q Consensus 180 ~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~ 216 (534)
.+++.....+.|.++++++|. ..+++.+.++++.+.+
T Consensus 81 ~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 118 (262)
T 1vic_A 81 EVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAK 118 (262)
T ss_dssp HHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHh
Confidence 444332112578999999998 5689999999987743
No 48
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=66.56 E-value=30 Score=34.29 Aligned_cols=107 Identities=12% Similarity=0.001 Sum_probs=59.3
Q ss_pred CCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 90 YPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDD-STNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 90 ~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dd-s~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
.++++.+|-++++.+.+++.++++ ..|...+.| -+|. +++...+ .+.+..+ ...++.+....
T Consensus 83 ~~kiAflil~h~d~~~l~rll~~l---y~p~n~y~I-HvD~ks~~~~~~---------~~~~~~~----~f~NV~v~~~~ 145 (391)
T 2gak_A 83 GFPIAYSIVVHHKIEMLDRLLRAI---YMPQNFYCI-HVDRKAEESFLA---------AVQGIAS----CFDNVFVASQL 145 (391)
T ss_dssp TSCEEEEEEECSCHHHHHHHHHHH---CCTTSEEEE-EECTTSCHHHHH---------HHHHHHH----TCTTEEECSSC
T ss_pred CCCEEEEEEecCCHHHHHHHHHHH---hCCCCeEEE-EEeCCCCHHHHH---------HHHHHHh----cCCCEEEeccC
Confidence 468999999999888888888877 224433444 4454 4433222 2222222 23677766322
Q ss_pred CCCC-CCh---hHHHHHHHhhhc--cCCcEEEEecCCCCC--CHHHHHHHHHH
Q 044519 169 NRNG-YKA---GALKEGLEKQYV--KDCQFVVIFDADFQP--DEDFLWRTIPY 213 (534)
Q Consensus 169 ~~~g-~Ka---~aln~gl~~a~~--~~~d~v~~lDaD~~~--~pd~L~~lv~~ 213 (534)
.... |.. .|--.+++.+.. .+.+|++.+-+++.| +.+.+.+.+..
T Consensus 146 ~~v~WGg~S~v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~ 198 (391)
T 2gak_A 146 ESVVYASWTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKC 198 (391)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHH
T ss_pred cccccCCchHHHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHh
Confidence 2222 222 122223333321 378999999888888 56655555444
No 49
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=64.33 E-value=19 Score=34.03 Aligned_cols=99 Identities=8% Similarity=0.035 Sum_probs=55.0
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|.++. ..+..+++.+.... -+++.| |..+...+..+ +.+.+....+.++.+...+ ...|-++
T Consensus 28 lpi~gk-pli~~~l~~l~~~g--i~~I~v-v~~~~~~~~i~------------~~l~~g~~~g~~i~~~~~~-~~~G~~~ 90 (293)
T 1fxo_A 28 LPVYDK-PMIYYPLSTLMLAG--IREILI-ISTPQDTPRFQ------------QLLGDGSNWGLDLQYAVQP-SPDGLAQ 90 (293)
T ss_dssp SEETTE-ETTHHHHHHHHHTT--CCEEEE-EECTTTHHHHH------------HHHTTSGGGTCEEEEEECS-SCCCGGG
T ss_pred CeECCE-eHHHHHHHHHHHCC--CCEEEE-EeccccHHHHH------------HHHhcccccCceEEEeeCC-CCCCHHH
Confidence 566665 67778888887654 233333 44332222222 2222211124556666433 3445888
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHh
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLL 215 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~ 215 (534)
++..|.+.. +.|-++++.+|....+..+.++++...
T Consensus 91 al~~a~~~i---~~~~~~lv~gD~~~~~~~l~~~l~~~~ 126 (293)
T 1fxo_A 91 AFLIGESFI---GNDLSALVLGDNLYYGHDFHELLGSAS 126 (293)
T ss_dssp HHHHTHHHH---TTSEEEEEETTEEEECTTHHHHHHHHH
T ss_pred HHHHHHHHh---CCCCEEEEECChhccCccHHHHHHHHH
Confidence 888888876 445455555997764356778877663
No 50
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=64.13 E-value=53 Score=29.26 Aligned_cols=100 Identities=10% Similarity=0.018 Sum_probs=56.4
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhh-cCccEEEEEecCCCCCChhHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIE-KGVNVKYETRKNRNGYKAGALK 179 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~-~~~~v~~~~r~~~~g~Ka~aln 179 (534)
+....++.+++++.+.... +++.| +.+....+ .+++.++++.. -..+..+. . ...+...++.
T Consensus 29 ~g~pli~~~l~~l~~~~~~-~~i~v-v~~~~~~~------------~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~i~ 91 (236)
T 2vsh_A 29 GDRPILIHTIEKFVLEPSI-EKIVV-GVHGDWVS------------HAEDLVDKYLPLYKERIIIT-K--GGADRNTSIK 91 (236)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CCEEE-EECGGGHH------------HHHHHHHHHCGGGGGGEEEE-E--CCSSHHHHHH
T ss_pred CCccHHHHHHHHHHcCCCC-CeEEE-EeCHHHHH------------HHHHHHHhccccccCceEEE-C--CCCchHHHHH
Confidence 3447899999999875322 23433 44432212 22222233210 00122222 1 1123566777
Q ss_pred HHHHhhhc--c--CCcEEEEecCCC-CCCHHHHHHHHHHHhcC
Q 044519 180 EGLEKQYV--K--DCQFVVIFDADF-QPDEDFLWRTIPYLLEN 217 (534)
Q Consensus 180 ~gl~~a~~--~--~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 217 (534)
.|++.... . +.|+++++++|. ..+++.+.+++..+.++
T Consensus 92 ~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 134 (236)
T 2vsh_A 92 NIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNH 134 (236)
T ss_dssp HHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhc
Confidence 78776511 2 348999999998 77999999999987444
No 51
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=63.88 E-value=51 Score=29.53 Aligned_cols=94 Identities=15% Similarity=0.169 Sum_probs=56.0
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
+....++.+++.+.+.... +++.| |.+. .++... + +.++. ..++.++. + .. |...++..
T Consensus 33 ~g~pll~~~i~~l~~~~~~-~~ivv-v~~~-~~~~~~--------~-----~~~~~--~~~v~~~~-~-~~-g~~~~i~~ 91 (236)
T 1i52_A 33 GNQTILEHSVHALLAHPRV-KRVVI-AISP-GDSRFA--------Q-----LPLAN--HPQITVVD-G-GD-ERADSVLA 91 (236)
T ss_dssp TTEEHHHHHHHHHHTSTTE-EEEEE-EECT-TCCSGG--------G-----SGGGG--CTTEEEEE-C-CS-SHHHHHHH
T ss_pred CCEEHHHHHHHHHHhCCCC-CeEEE-EeCc-cHHHHH--------H-----HHhcC--CCCEEEEC-C-CC-CHHHHHHH
Confidence 4456889999998765422 23332 4443 222233 1 11111 12454442 2 22 46777888
Q ss_pred HHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcC
Q 044519 181 GLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLEN 217 (534)
Q Consensus 181 gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~ 217 (534)
|++.. .+.|.++++++|.- .+++.+.++++.+.++
T Consensus 92 al~~~--~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 127 (236)
T 1i52_A 92 GLKAA--GDAQWVLVHDAARPCLHQDDLARLLALSETS 127 (236)
T ss_dssp HHHTS--TTCSEEEECCTTCTTCCHHHHHHHHGGGGTC
T ss_pred HHHhc--CCCCEEEEEcCccccCCHHHHHHHHHHHHhc
Confidence 88775 23689999999974 5999999999887443
No 52
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=62.42 E-value=36 Score=34.16 Aligned_cols=93 Identities=17% Similarity=0.168 Sum_probs=57.4
Q ss_pred eccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhH
Q 044519 98 PMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGA 177 (534)
Q Consensus 98 P~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~a 177 (534)
|.-+ ...++.+++++.+.. -+++.| +.+.. ++..+ +...+ .++.++..+ ...|-+++
T Consensus 29 ~i~g-kpli~~~l~~l~~~~--~~~iiv-v~~~~-~~~i~------------~~~~~-----~~~~~v~~~-~~~g~~~~ 85 (456)
T 2v0h_A 29 TIAG-KPMVKHVIDTAHQLG--SENIHL-IYGHG-GDLMR------------THLAN-----EQVNWVLQT-EQLGTAHA 85 (456)
T ss_dssp EETT-EEHHHHHHHHHHHTT--CSCEEE-EECTT-HHHHH------------HHTTT-----CCCEEEECS-CCCCHHHH
T ss_pred EECC-ccHHHHHHHHHHhCC--CCcEEE-EeCCC-HHHHH------------HHhhc-----CCcEEEeCC-CCCCcHHH
Confidence 4433 468899999998765 234433 44432 22222 22211 135555333 33346778
Q ss_pred HHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHh
Q 044519 178 LKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLL 215 (534)
Q Consensus 178 ln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 215 (534)
+..+++.. .+.|.++++++|. ..+++.++++++...
T Consensus 86 ~~~~~~~~--~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 122 (456)
T 2v0h_A 86 VQQAAPFF--KDNENIVVLYGDAPLITKETLEKLIEAKP 122 (456)
T ss_dssp HHHHGGGC--CTTSEEEEEETTCTTCCHHHHHHHHHHCC
T ss_pred HHHHHHhc--CCCCeEEEEcCCcceeCHHHHHHHHHHHh
Confidence 88888765 2378999999998 468999999998873
No 53
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=61.68 E-value=30 Score=32.79 Aligned_cols=101 Identities=15% Similarity=0.059 Sum_probs=57.4
Q ss_pred EEecc-CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecC-----
Q 044519 96 QIPMY-NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKN----- 169 (534)
Q Consensus 96 iIP~y-ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~----- 169 (534)
++|.- +....+..+++.+.+... .++.| |+.....+... +...+....+.++.+...+.
T Consensus 25 l~~ig~~g~pli~~~l~~~~~~~~--~~i~v-v~~~~~~~~~~------------~~~~~~~~~~~~i~~~~~~~~~~~~ 89 (303)
T 3pnn_A 25 LDGIGPGGDTIMDYSVYDAIRAGF--GRLVF-VIRHSFEKEFR------------EKILTKYEGRIPVELVFQELDRLPE 89 (303)
T ss_dssp CCCCSTTSCCHHHHHHHHHHHHTC--CEEEE-EECGGGHHHHH------------HHTHHHHTTTSCEEEEECCTTCCCT
T ss_pred EeEcCCCCeeHHHHHHHHHHHCCC--CeEEE-EcCchHHHHHH------------HHHHHHhccCCcEEEEecccccccc
Confidence 45663 344788899988876532 33433 44322112222 22222112245666764431
Q ss_pred ---------CCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHh
Q 044519 170 ---------RNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLL 215 (534)
Q Consensus 170 ---------~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~ 215 (534)
...|-++|+..+.+.. +.+ ++++.+|.+.+++.++++++...
T Consensus 90 ~~~~~~~~~~~~Gt~~al~~a~~~i---~~~-~lV~~gD~l~~~~~~~~l~~~~~ 140 (303)
T 3pnn_A 90 GFSCPEGREKPWGTNHAVLMGRDAI---REP-FAVINADDFYGRNGFEVLARKLM 140 (303)
T ss_dssp TCCCCTTCCSCCCHHHHHHTTTTTC---CSC-EEEEESSCBCCHHHHHHHHHHHH
T ss_pred cccccccccccCCcHHHHHHHHHhc---CCC-EEEEECCeecCHHHHHHHHHHHH
Confidence 1234667777666654 444 56668999999999999998874
No 54
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=60.83 E-value=87 Score=27.68 Aligned_cols=96 Identities=17% Similarity=0.126 Sum_probs=56.4
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKE 180 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~ 180 (534)
+....++.+++.+.+.... +++.| |... .++..+ + + .++. ...+.+. + ...+..+++..
T Consensus 32 ~gkpli~~~l~~l~~~~~~-~~ivv-v~~~-~~~~~~--------~-~----~~~~--~~~i~~~--~-~~~~~~~si~~ 90 (231)
T 1vgw_A 32 GSKTVLEHVLGIFERHEAV-DLTVV-VVSP-EDTFAD--------K-V----QTAF--PQVRVWK--N-GGQTRAETVRN 90 (231)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CEEEE-ECCT-TCSTHH--------H-H----HHHC--TTSEEEC--C-CCSSHHHHHHH
T ss_pred CCeEHHHHHHHHHHcCCCC-CeEEE-EECc-cHHHHH--------H-H----HhcC--CCceEEE--c-CCCcHHHHHHH
Confidence 4557899999999875422 23333 3332 222222 2 1 2211 1234433 2 22246777888
Q ss_pred HHHhhhcc----CCcEEEEecCCC-CCCHHHHHHHHHHHhcC
Q 044519 181 GLEKQYVK----DCQFVVIFDADF-QPDEDFLWRTIPYLLEN 217 (534)
Q Consensus 181 gl~~a~~~----~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 217 (534)
|++..... +.|.++++++|. ..+++.+.++++.+.++
T Consensus 91 ~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~ 132 (231)
T 1vgw_A 91 GVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNA 132 (231)
T ss_dssp HHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTC
T ss_pred HHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhc
Confidence 88764111 468999999997 45899999999987443
No 55
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=58.88 E-value=32 Score=32.53 Aligned_cols=99 Identities=10% Similarity=0.074 Sum_probs=54.7
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|.++. ..+..+++.+.... -+++.| |......+. +++.+.+....+.++.+...+. ..|-++
T Consensus 29 lpi~gk-pli~~~l~~l~~~g--i~~Iiv-v~~~~~~~~------------i~~~l~~g~~~g~~i~~~~~~~-~~G~~~ 91 (295)
T 1lvw_A 29 LPIYDK-PMIYYPLSVLMLAG--IRDILI-ISTPRDLPL------------YRDLLGDGSQFGVRFSYRVQEE-PRGIAD 91 (295)
T ss_dssp SEETTE-ETTHHHHHHHHHTT--CCEEEE-EECTTTHHH------------HHHHHTTSGGGTSEEEEEECSS-CCCGGG
T ss_pred cEECCe-eHHHHHHHHHHHCC--CCeEEE-EeccchHHH------------HHHHhhhccccCceEEEeeCCC-CCChHH
Confidence 566765 67778888887654 233333 332222222 2223222111245666664333 345888
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHh
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLL 215 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~ 215 (534)
++..|.+.. .+.+++++. +|.......+.+++....
T Consensus 92 al~~a~~~i--~~~~~~lv~-gD~~~~~~~l~~~l~~~~ 127 (295)
T 1lvw_A 92 AFIVGKDFI--GDSKVALVL-GDNVFYGHRFSEILRRAA 127 (295)
T ss_dssp HHHHTHHHH--TTSCEEEEE-TTCCEECTTHHHHHHHHH
T ss_pred HHHHHHHHh--CCCcEEEEE-CCccccCcCHHHHHHHHH
Confidence 888888775 234566666 998763356777777663
No 56
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=57.76 E-value=17 Score=34.27 Aligned_cols=54 Identities=9% Similarity=-0.120 Sum_probs=39.4
Q ss_pred CccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCC--HHHHHHHHHHHhc
Q 044519 159 GVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPD--EDFLWRTIPYLLE 216 (534)
Q Consensus 159 ~~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~--pd~L~~lv~~~~~ 216 (534)
+.++.++..+ ...|-++++..+.+.. +.|.++++.+|...+ +..+.++++...+
T Consensus 105 g~~i~~~~~~-~~~Gt~~al~~a~~~~---~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~ 160 (297)
T 2ux8_A 105 PGNIAYVRQQ-EPMGLGHAVWCARDIV---GDEPFAVLLPDDFMFGQPGCLKQMVDAYNK 160 (297)
T ss_dssp TTSEEEEECC-SCCCHHHHHHTTHHHH---CSSCEEEECTTEEEESSSCHHHHHHHHHHH
T ss_pred CCceEEEeCC-CCCChHHHHHHHHHHc---CCCcEEEEeCCeecCCChHHHHHHHHHHHh
Confidence 3457666433 3335778888887776 568899999999887 6889999887743
No 57
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=54.92 E-value=45 Score=33.54 Aligned_cols=96 Identities=7% Similarity=0.045 Sum_probs=58.5
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|.-+ ...++.+++++.+.. -+++.| +.... ++..+ +.+. . ++.++. +....|-++
T Consensus 34 ~~i~g-kpli~~~l~~l~~~g--~~~iiv-v~~~~-~~~i~------------~~~~----~--~i~~v~-~~~~~G~~~ 89 (468)
T 1hm9_A 34 HKVAG-ISMLEHVFRSVGAIQ--PEKTVT-VVGHK-AELVE------------EVLA----G--QTEFVT-QSEQLGTGH 89 (468)
T ss_dssp SEETT-EEHHHHHHHHHHTTC--CSEEEE-EECTT-HHHHH------------HSSS----S--SSEEEE-CSSCCCHHH
T ss_pred eEECC-ccHHHHHHHHHHhcC--CCCEEE-EECCC-HHHHH------------HHhC----C--CcEEEe-CCccCChHH
Confidence 45444 478999999998764 234433 44332 22221 1111 1 455554 333334778
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHHHHhcC
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIPYLLEN 217 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~ 217 (534)
++..+++.. ....|.++++++|.- .+++.++++++.+.++
T Consensus 90 sl~~a~~~~-~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~ 130 (468)
T 1hm9_A 90 AVMMTEPIL-EGLSGHTLVIAGDTPLITGESLKNLIDFHINH 130 (468)
T ss_dssp HHHTTHHHH-TTCCSEEEEEETTCTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHh-ccCCCeEEEEeCCccccCHHHHHHHHHHHHhc
Confidence 888888765 112689999999985 5889999999877443
No 58
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=54.44 E-value=19 Score=32.16 Aligned_cols=94 Identities=12% Similarity=0.046 Sum_probs=54.2
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHH
Q 044519 102 EKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEG 181 (534)
Q Consensus 102 e~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~g 181 (534)
....+..+++.+.+.... +++ ++|.+.. ++. +.+...+++ +.++.++. + ..+..+++..|
T Consensus 31 g~pli~~~l~~l~~~~~~-~~i-vvv~~~~-~~~-----------~~~~~~~~~---~~~v~~~~-~--~~~~~~sv~~a 90 (228)
T 2yc3_A 31 GQPIALYSFFTFSRMPEV-KEI-VVVCDPF-FRD-----------IFEEYEESI---DVDLSFAI-P--GKERQDSVYSG 90 (228)
T ss_dssp TEEHHHHHHHHHHHCTTE-EEE-EEECCGG-GHH-----------HHHTTTTTS---SSEEEEEC-C--CSSHHHHHHHH
T ss_pred CEEHHHHHHHHHHcCCCC-CeE-EEEEChH-HHH-----------HHHHHHHhC---CCcEEEEC-C--CCCHHHHHHHH
Confidence 346888999998775321 233 3233332 211 111111111 23455542 1 12466778888
Q ss_pred HHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhc
Q 044519 182 LEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLE 216 (534)
Q Consensus 182 l~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~ 216 (534)
++.. ..+.++++++|+|. ..+++.+.++++.+.+
T Consensus 91 l~~~-~~~~~~vl~~d~d~P~~~~~~i~~l~~~~~~ 125 (228)
T 2yc3_A 91 LQEI-DVNSELVCIHDSARPLVNTEDVEKVLKDGSA 125 (228)
T ss_dssp HTTS-CTTCSEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred HHhh-ccCCCEEEEecCCCccCCHHHHHHHHHHHHh
Confidence 8765 12358999999996 6699999999988743
No 59
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=53.52 E-value=29 Score=30.07 Aligned_cols=93 Identities=5% Similarity=0.038 Sum_probs=52.1
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHH-HhhcCccEEEEEecCCCCCChhHHH
Q 044519 101 NEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLK-WIEKGVNVKYETRKNRNGYKAGALK 179 (534)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~-~~~~~~~v~~~~r~~~~g~Ka~aln 179 (534)
+....+..+++.+.+.. -+++.| +.+.. ++... +.+++ + ....++.++. + ...|..+++.
T Consensus 25 ~g~pli~~~l~~l~~~~--~~~v~v-v~~~~-~~~i~------------~~~~~~~-~~~~~~~~~~-~-~~~g~~~si~ 85 (196)
T 3rsb_A 25 CGRCLIDYVVSPLLKSK--VNNIFI-ATSPN-TPKTK------------EYINSAY-KDYKNIVVID-T-SGKGYIEDLN 85 (196)
T ss_dssp TTEEHHHHHHHHHHSSS--CCCEEE-ECCTT-CHHHH------------HHHHHHT-TTTTEEEE----------CCCCC
T ss_pred CCEEHHHHHHHHHHHCC--CCEEEE-EeCCC-hHHHH------------HHHHhhc-cCCCCEEEEE-C-CCCCcHHHHH
Confidence 34478999999998765 234333 33332 22222 22222 1 1112444442 2 2223555666
Q ss_pred HHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhc
Q 044519 180 EGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLE 216 (534)
Q Consensus 180 ~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~ 216 (534)
.|++.. .|.++++++|. ..+++.+.++++.+.+
T Consensus 86 ~al~~~----~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 86 ECIGYF----SEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp TTTTTC----SSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred HHHHhC----CCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 666653 78999999998 4599999999998853
No 60
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=53.16 E-value=53 Score=32.21 Aligned_cols=42 Identities=29% Similarity=0.333 Sum_probs=34.0
Q ss_pred CChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcC
Q 044519 173 YKAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLEN 217 (534)
Q Consensus 173 ~Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 217 (534)
+...++..|++.. +.|+++++|+|. ..+++.+.++++.+.++
T Consensus 75 g~~~sv~~aL~~l---~~d~vlv~~~D~Pli~~~~i~~li~~~~~~ 117 (371)
T 1w55_A 75 TRAESLKKALELI---DSEFVMVSDVARVLVSKNLFDRLIENLDKA 117 (371)
T ss_dssp SHHHHHHHHHTTC---CSSEEEEEETTCTTCCHHHHHHHHTTGGGC
T ss_pred ChHHHHHHHHHhc---CCCeEEEEeCCcccCCHHHHHHHHHHHHhc
Confidence 3567888888876 689999999997 55999999999887433
No 61
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=52.01 E-value=69 Score=28.17 Aligned_cols=89 Identities=15% Similarity=0.176 Sum_probs=53.1
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHH
Q 044519 102 EKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEG 181 (534)
Q Consensus 102 e~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~g 181 (534)
....++.+++.+.+.... +++.| +.++... + .+++..+ +.++.+... .. +...++..|
T Consensus 29 g~pli~~~l~~l~~~~~~-~~i~v-v~~~~~~---~---------~~~~~~~-----~~~v~~~~~--~~-~~~~~i~~a 86 (223)
T 2xwl_A 29 GTPLLEHALSGLRASGVI-DRIVI-AVPPALT---D---------ESKLVFG-----GEDSVIVSG--GV-DRTESVALA 86 (223)
T ss_dssp TEEHHHHHHHHHHHHSCC-SEEEE-EECGGGH---H---------HHHHHTC-----BTTEEEEEC--CS-SHHHHHHHH
T ss_pred CeEHHHHHHHHHhcCCCC-CeEEE-EEcccHH---H---------HHHHHhc-----cCCeEEEcC--CC-CHHHHHHHH
Confidence 446888888888764322 23333 4443211 1 1211111 234555532 22 256677777
Q ss_pred HHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHH
Q 044519 182 LEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYL 214 (534)
Q Consensus 182 l~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~ 214 (534)
++.. .+.|+++++++|. ..+++.+.++++.+
T Consensus 87 l~~~--~~~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 87 LEAA--GDAEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp HTTC--TTCSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred HHhc--CCCCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 7764 2568999999998 56999999999877
No 62
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=50.01 E-value=29 Score=32.80 Aligned_cols=98 Identities=9% Similarity=0.056 Sum_probs=53.5
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChh
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAG 176 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~ 176 (534)
+|.++. ..+..+++.+.... -.++.| |......+ .+++.+.+....+.++.+...+ ...|-++
T Consensus 29 lpi~gk-pli~~~l~~l~~~g--i~~I~v-v~~~~~~~------------~i~~~l~~g~~~g~~i~~~~~~-~~~G~~~ 91 (296)
T 1mc3_A 29 LPIYDK-PMIYYPLSVLMLAG--IREILI-ITTPEDKG------------YFQRLLGDGSEFGIQLEYAEQP-SPDGLAQ 91 (296)
T ss_dssp SEETTE-ETTHHHHHHHHHTT--CCEEEE-EECTTTHH------------HHHHHHTTSGGGTCEEEEEECS-SCCCSTH
T ss_pred eEECCe-eHHHHHHHHHHhCC--CCcEEE-EechhHHH------------HHHHHHhcccccCceEEEeccC-CCCCHHH
Confidence 566665 57777888887643 233333 44322222 2223322211124556666443 3345788
Q ss_pred HHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHH
Q 044519 177 ALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYL 214 (534)
Q Consensus 177 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 214 (534)
++..|.+.. .+.+++++. +|....+..+.+++...
T Consensus 92 al~~a~~~i--~~~~~~lv~-gD~~~~~~~l~~~l~~~ 126 (296)
T 1mc3_A 92 AFIIGETFL--NGEPSCLVL-GDNIFFGQGFSPKLRHV 126 (296)
T ss_dssp HHHHTHHHH--TTSCEEEEE-TTEEEECSSCHHHHHHH
T ss_pred HHHHHHHHh--CCCCEEEEE-CCccccccCHHHHHHHH
Confidence 888888775 234555555 89765335667777766
No 63
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=49.06 E-value=36 Score=32.01 Aligned_cols=54 Identities=15% Similarity=-0.069 Sum_probs=38.2
Q ss_pred CccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCC----HH---HHHHHHHHHhc
Q 044519 159 GVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPD----ED---FLWRTIPYLLE 216 (534)
Q Consensus 159 ~~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~----pd---~L~~lv~~~~~ 216 (534)
+.++.++.. ....|-++++..+.+.. +.+.++++.+|...+ ++ .+.++++...+
T Consensus 101 ~~~i~~~~~-~~~~Gt~~al~~a~~~~---~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~ 161 (302)
T 2e3d_A 101 HVTIMQVRQ-GLAKGLGHAVLCAHPVV---GDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDE 161 (302)
T ss_dssp TCEEEEEEC-SSCCCHHHHHHHTHHHH---CSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHH
T ss_pred CcceEEeeC-CccCCHHHHHHHHHHHc---CCCcEEEEcCCccccCccccchHHHHHHHHHHHHh
Confidence 445666533 33345788888888776 567899999998876 45 68888887643
No 64
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=47.43 E-value=13 Score=33.54 Aligned_cols=87 Identities=10% Similarity=0.058 Sum_probs=50.0
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHH
Q 044519 102 EKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEG 181 (534)
Q Consensus 102 e~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~g 181 (534)
....++.+++++.+. . +++.| |. ...++ +.+...+++ +.++.++..+....|-++++..|
T Consensus 44 g~pli~~~l~~l~~~-~--~~i~v-v~-~~~~~------------~~~~~~~~~---~~~~~~v~~~~~~~g~~~~i~~a 103 (232)
T 2xme_A 44 GCEIILRTMKLLSPH-V--SEFII-VA-SRYAD------------DIDAFLKDK---GFNYKIVRHDRPEKGNGYSLLVA 103 (232)
T ss_dssp TEEHHHHHHHHHGGG-E--EEEEE-EE-STTHH------------HHHHHHTTS---CCCEEEEECSCGGGCHHHHHHTT
T ss_pred CEEHHHHHHHHHHHh-C--CEEEE-Ee-CChHH------------HHHHHHHhc---CCcEEEEECCCCCCCcHHHHHHH
Confidence 346888899988765 2 34444 44 32221 211212221 34566664332223456777777
Q ss_pred HHhhhccCCcEEEEecCCCCCCHHHHHHHHH
Q 044519 182 LEKQYVKDCQFVVIFDADFQPDEDFLWRTIP 212 (534)
Q Consensus 182 l~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~ 212 (534)
++.. + +.++++.+|...+++.++++++
T Consensus 104 ~~~~---~-~~~lv~~~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 104 KNHV---E-DRFILTMGDHVYSQQFIEKAVR 130 (232)
T ss_dssp GGGC---C-SSEEEEETTEEECHHHHHHHTT
T ss_pred HHHC---C-CCEEEEcCCcccCHHHHHHHHh
Confidence 7765 4 4466788998778888887754
No 65
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=45.66 E-value=1e+02 Score=27.43 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=31.0
Q ss_pred CCChhHHHHHHHhhhccCCcEEEEecCCCC-CCHHHHHHHHH
Q 044519 172 GYKAGALKEGLEKQYVKDCQFVVIFDADFQ-PDEDFLWRTIP 212 (534)
Q Consensus 172 g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~ 212 (534)
.|-++++..|++.. + |.++++++|.- ++++.++++++
T Consensus 70 ~g~~~~i~~a~~~~---~-~~~lv~~~D~P~~~~~~i~~l~~ 107 (232)
T 2dpw_A 70 GGLLENLEQALEHV---E-GRVLVATGDIPHLTEEAVRFVLD 107 (232)
T ss_dssp SSHHHHHHHHHHTC---C-SEEEEEETTCTTCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHc---C-CCEEEEeCCcccCCHHHHHHHHh
Confidence 34778888888876 5 89999999985 58999999988
No 66
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=36.29 E-value=53 Score=31.30 Aligned_cols=57 Identities=12% Similarity=-0.137 Sum_probs=37.9
Q ss_pred CccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCC-HHHHHHHHHHHhcC
Q 044519 159 GVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPD-EDFLWRTIPYLLEN 217 (534)
Q Consensus 159 ~~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~-pd~L~~lv~~~~~~ 217 (534)
+.++.++..+. ..|-++++..+.+.. ..+.|.++++.+|...+ +..+.+++..+.++
T Consensus 104 g~~i~~~~~~~-~~Gt~~al~~a~~~l-~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~ 161 (323)
T 2pa4_A 104 LIKAVPVTQDK-PLGLGHAVGLAESVL-DDDEDVVAVMLPDDLVLPTGVMERMAQVRAEF 161 (323)
T ss_dssp HCEEEEEECSS-CCCHHHHHHTTGGGS-CSSCCEEEEECTTEEEESSCHHHHHHHHHHTT
T ss_pred CcceEEEeCCc-cCCcHHHHHHHHHHh-cCCCCeEEEEeCCcccCchHHHHHHHHHHHhc
Confidence 34566664333 345777777777654 11335599999998886 68899998887443
No 67
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=35.20 E-value=1.3e+02 Score=27.95 Aligned_cols=117 Identities=8% Similarity=-0.041 Sum_probs=56.9
Q ss_pred cEEEEEeccCch--HHHHHHHHHHHcCCCCCCceEEEEE-cCCChhhhchhhhhhhHHHHHHHHHHHhhcCccEEEEEec
Q 044519 92 MVLVQIPMYNEK--EVYKLSIGAACGLSWPSDRLIVQVL-DDSTNEVLRTDFFQYTQKLVELECLKWIEKGVNVKYETRK 168 (534)
Q Consensus 92 ~VsViIP~yne~--~~l~~~L~sl~~q~yp~~~~~I~V~-Dds~D~t~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~r~ 168 (534)
.+.|++.+ |+. ..+..++.|++.-.- +..+.++|. |+-+++..+ .+++..++ .+..+..+.-+
T Consensus 5 ~i~I~~~~-d~~Y~~~~~v~i~Sl~~~~~-~~~~~~~il~~~is~~~~~---------~L~~~~~~---~~~~i~~~~~~ 70 (276)
T 3tzt_A 5 ADALLLTL-DENYIPQMKVLMTSIYINNP-GRIFDVYLIHSRISEDKLK---------DLGEDLKK---FSYTLYPIRAT 70 (276)
T ss_dssp CEEEEEEC-CGGGHHHHHHHHHHHHHHST-TCCEEEEEEESCCCHHHHH---------HHHHHHHT---TTCEEEEEECC
T ss_pred eEEEEEEe-CHhHHHHHHHHHHHHHHhCC-CCceEEEEEeCCCCHHHHH---------HHHHHHHH---cCCEEEEEEeC
Confidence 46666555 443 778888999977542 234656555 444444333 44444433 24556555433
Q ss_pred CCCC-C----ChhHHHHHHHh----hhccCCcEEEEecCCCCCCHHHHHHHHH-HHhcCCcEEEEe
Q 044519 169 NRNG-Y----KAGALKEGLEK----QYVKDCQFVVIFDADFQPDEDFLWRTIP-YLLENKELGLVQ 224 (534)
Q Consensus 169 ~~~g-~----Ka~aln~gl~~----a~~~~~d~v~~lDaD~~~~pd~L~~lv~-~~~~~~~v~~V~ 224 (534)
...- . +......-.+. ....+.|-++.+|+|.++-.| +.++.. .+ .+..+++|.
T Consensus 71 ~~~~~~~~~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~d-i~~L~~~dl-~~~~~aav~ 134 (276)
T 3tzt_A 71 DDLFSFAKVTDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINP-LDDLLRTDI-SDYILAAAS 134 (276)
T ss_dssp -------------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSC-SHHHHTCCC-TTSSEEEEE
T ss_pred HHHHhcCccccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCC-HHHHhhcCC-CCCeEEEEE
Confidence 2110 0 00000001111 111268999999999888543 233322 22 233466653
No 68
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=32.57 E-value=92 Score=29.41 Aligned_cols=18 Identities=28% Similarity=0.521 Sum_probs=14.9
Q ss_pred cCCcEEEEecCCCCCCHH
Q 044519 188 KDCQFVVIFDADFQPDED 205 (534)
Q Consensus 188 ~~~d~v~~lDaD~~~~pd 205 (534)
.+.|-|+.+|+|.++-.|
T Consensus 94 ~~~~kvlyLD~D~iv~~d 111 (311)
T 1g9r_A 94 ADCDKVLYLDIDVLVRDS 111 (311)
T ss_dssp CSCSCEEEECSSEEECSC
T ss_pred hhcCEEEEEcCCeEeccC
Confidence 377999999999888554
No 69
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=27.11 E-value=84 Score=28.16 Aligned_cols=41 Identities=12% Similarity=0.156 Sum_probs=33.6
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhcC
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLEN 217 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 217 (534)
...++..|++.. +.|.++++++|. ..+++.+.+++..+.++
T Consensus 93 ~~~~i~~al~~~---~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 134 (236)
T 2px7_A 93 RQASVARLLEAA---SLPLVLVHDVARPFVSRGLVARVLEAAQRS 134 (236)
T ss_dssp HHHHHHHHHHHC---CSSEEEECCTTCCCCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHc---CCCeEEEecCccccCCHHHHHHHHHHHHhc
Confidence 677788888876 689999999996 56999999999887433
No 70
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=25.21 E-value=3.7e+02 Score=24.10 Aligned_cols=46 Identities=13% Similarity=0.223 Sum_probs=36.1
Q ss_pred CCCCCChhHHHHHHHhhhccCCcEEEEecCCCCC-CHHHHHHHHHHH
Q 044519 169 NRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQP-DEDFLWRTIPYL 214 (534)
Q Consensus 169 ~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~ 214 (534)
+..+|-+..++.|++.+....++-++++-+|+-. +++.|.+++..+
T Consensus 82 q~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l 128 (242)
T 3cgx_A 82 QQGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDL 128 (242)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHh
Confidence 4556688888999887533456789999999544 999999999887
No 71
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=22.78 E-value=2.8e+02 Score=24.16 Aligned_cols=73 Identities=19% Similarity=0.144 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEee
Q 044519 146 KLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQA 225 (534)
Q Consensus 146 ~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~ 225 (534)
..+.+..+.+.+++.++++-.++-. |.-.|-+|--+..|. -.+|.+.=+| +.-+.| .+-++.+|.|
T Consensus 63 ~~v~el~~~L~~~G~~V~faIHPVA-GRMPGhMNVLLAEA~-VPYd~v~EMd-----------eIN~df-~~tDv~lVIG 128 (207)
T 1djl_A 63 YPIADLVKMLTEQGKKVRFGIHPVA-GRMPGQLNVLLAEAG-VPYDIVLEMD-----------EINHDF-PDTDLVLVIG 128 (207)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTC-SSSTTHHHHHHHHTT-CCGGGEEEHH-----------HHGGGG-GGCSEEEEES
T ss_pred HHHHHHHHHHHHCCCeEEEEeCccC-CCCCCCCcEEEEEeC-CCHHHHhhHH-----------HHhhhh-hhcCEEEEec
Confidence 3556666777788999999877643 348889999999871 1333333222 334455 5667777777
Q ss_pred eeEeecC
Q 044519 226 RWKFVNA 232 (534)
Q Consensus 226 ~~~~~n~ 232 (534)
.....|+
T Consensus 129 ANDvVNP 135 (207)
T 1djl_A 129 ANDTVNS 135 (207)
T ss_dssp CCGGGCT
T ss_pred cccccCC
Confidence 7665554
No 72
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=22.72 E-value=4.5e+02 Score=24.19 Aligned_cols=130 Identities=12% Similarity=0.072 Sum_probs=65.5
Q ss_pred hcCCCCcEEEEEeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhh-chhhhhhhHHHHHHHHHHHhhcCccEEE
Q 044519 86 LNKSYPMVLVQIPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVL-RTDFFQYTQKLVELECLKWIEKGVNVKY 164 (534)
Q Consensus 86 ~~~~~P~VsViIP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~-~~~~~~~~~~~v~~~~~~~~~~~~~v~~ 164 (534)
.++..|++.|-++.-+.++.+ ..++.+.. .+.|-+++ -+|--.+... + ...+.++...+. ..+..+.+
T Consensus 35 ~g~g~p~i~v~l~~~~~~e~~-~~~~~~~~--~gaD~VEl-RvD~l~~~~~~~-----~v~~~l~~lr~~--~~~~PiI~ 103 (276)
T 3o1n_A 35 VGEGAPKIIVSLMGKTITDVK-SEALAYRE--ADFDILEW-RVDHFANVTTAE-----SVLEAAGAIREI--ITDKPLLF 103 (276)
T ss_dssp ETSSSCEEEEEECCSSHHHHH-HHHHHHTT--SCCSEEEE-EGGGCTTTTCHH-----HHHHHHHHHHHH--CCSSCEEE
T ss_pred eCCCCcEEEEEeCCCCHHHHH-HHHHHHhh--CCCCEEEE-EeccccccCcHH-----HHHHHHHHHHHh--cCCCCEEE
Confidence 346678888777776655443 33344432 23455666 6665332221 1 000233222221 12355666
Q ss_pred EEecCCCCCCh----hHHHHHHHhhhccC-CcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEeeeeEee
Q 044519 165 ETRKNRNGYKA----GALKEGLEKQYVKD-CQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQARWKFV 230 (534)
Q Consensus 165 ~~r~~~~g~Ka----~aln~gl~~a~~~~-~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~ 230 (534)
--|....||+. ...-..++.+.... .|| +|-+-..+++.+.+++... ...++.++...+.+.
T Consensus 104 T~Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dy---IDvEl~~~~~~~~~l~~~a-~~~~~kvI~S~Hdf~ 170 (276)
T 3o1n_A 104 TFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDM---IDLELFTGDDEVKATVGYA-HQHNVAVIMSNHDFH 170 (276)
T ss_dssp ECCBGGGTCSBCCCHHHHHHHHHHHHHHTCCSE---EEEEGGGCHHHHHHHHHHH-HHTTCEEEEEEEESS
T ss_pred EEEEhhhCCCCCCCHHHHHHHHHHHHhcCCCCE---EEEECcCCHHHHHHHHHHH-HhCCCEEEEEeecCC
Confidence 65666666653 12222222221113 566 4666666778888888765 344666776665543
No 73
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=22.72 E-value=2.7e+02 Score=24.21 Aligned_cols=73 Identities=14% Similarity=0.134 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhhcCccEEEEEecCCCCCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhcCCcEEEEee
Q 044519 146 KLVELECLKWIEKGVNVKYETRKNRNGYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLENKELGLVQA 225 (534)
Q Consensus 146 ~~v~~~~~~~~~~~~~v~~~~r~~~~g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~ 225 (534)
..+.+..+.+.+++.++++-.++-. |.-.|-+|--+..|. -.+|.+.=+| +.-+.| .+-++.+|.|
T Consensus 64 ~~v~el~~~L~~~G~~V~faIHPVA-GRMPGhMNVLLAEA~-VPYd~v~EMd-----------eIN~df-~~tDv~lVIG 129 (203)
T 2fsv_C 64 HALREMADVLKKEGVEVSYAIHPVA-GRMPGHMNVLLAEAN-VPYDEVFELE-----------EINSSF-QTADVAFVIG 129 (203)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTC-SSSTTHHHHHHHHTT-CCGGGEEEHH-----------HHGGGS-TTCSEEEEES
T ss_pred HHHHHHHHHHHHcCCeEEEEecccc-cCCCCCccEEEEEec-CCHHHHhhHH-----------HHhhhh-hhcCEEEEec
Confidence 3556666777788999999877643 348889999999871 1344343322 344455 5668888888
Q ss_pred eeEeecC
Q 044519 226 RWKFVNA 232 (534)
Q Consensus 226 ~~~~~n~ 232 (534)
.....|+
T Consensus 130 ANDvVNP 136 (203)
T 2fsv_C 130 ANDVTNP 136 (203)
T ss_dssp CCGGGCG
T ss_pred cccccCc
Confidence 7665554
No 74
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=21.37 E-value=2.1e+02 Score=28.13 Aligned_cols=103 Identities=11% Similarity=0.086 Sum_probs=54.7
Q ss_pred EeccCchHHHHHHHHHHHcCCCCCCceEEEEEcCCChhhhchhhhhhhHHHHHHHHHH-Hhh----cCccEEEEEecC--
Q 044519 97 IPMYNEKEVYKLSIGAACGLSWPSDRLIVQVLDDSTNEVLRTDFFQYTQKLVELECLK-WIE----KGVNVKYETRKN-- 169 (534)
Q Consensus 97 IP~yne~~~l~~~L~sl~~q~yp~~~~~I~V~Dds~D~t~~~~~~~~~~~~v~~~~~~-~~~----~~~~v~~~~r~~-- 169 (534)
+|.-+....++.+++.+.+.. -+++.| +.+... +... +...+ +.. ....+.++....
T Consensus 38 lpi~gk~pli~~~l~~l~~~g--i~~i~v-v~~~~~-~~i~------------~~~~~~~~~~~~~~~~~v~i~~~~~~~ 101 (420)
T 3brk_X 38 VYFGGKARIIDFALSNALNSG--IRRIGV-ATQYKA-HSLI------------RHLQRGWDFFRPERNESFDILPASQRV 101 (420)
T ss_dssp SEETTTEETHHHHHHHHHHTT--CCEEEE-EECTTC-HHHH------------HHHHHHSCCCCGGGTCEEEEECCC---
T ss_pred cccCCCCcHHHHHHHHHHhCC--CCeEEE-EeCCCh-HHHH------------HHHhhhhccccccccCCEEEeCccccc
Confidence 455565468888999988764 234433 444322 2222 22222 210 011244432111
Q ss_pred --CC--CCChhHHHHHHHhhhccCCcEEEEecCCCCCCHHHHHHHHHHHhc
Q 044519 170 --RN--GYKAGALKEGLEKQYVKDCQFVVIFDADFQPDEDFLWRTIPYLLE 216 (534)
Q Consensus 170 --~~--g~Ka~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~ 216 (534)
+. .|-++++..+++.....+.|.++++.+|.+.+.+ +.++++...+
T Consensus 102 ~~~~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~-l~~l~~~~~~ 151 (420)
T 3brk_X 102 SETQWYEGTADAVYQNIDIIEPYAPEYMVILAGDHIYKMD-YEYMLQQHVD 151 (420)
T ss_dssp ----CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEECBC-THHHHHHHHH
T ss_pred cCCccccCCHHHHHHHHHHHHhcCCCEEEEecccEEEchH-HHHHHHHHHH
Confidence 21 3467788777765411135889999999965544 6777776633
No 75
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=20.58 E-value=1.5e+02 Score=26.07 Aligned_cols=43 Identities=12% Similarity=0.102 Sum_probs=32.0
Q ss_pred ChhHHHHHHHhhhccCCcEEEEecCCC-CCCHHHHHHHHHHHhc
Q 044519 174 KAGALKEGLEKQYVKDCQFVVIFDADF-QPDEDFLWRTIPYLLE 216 (534)
Q Consensus 174 Ka~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~ 216 (534)
...++..|++.+...+.|+++++++|. .++++.+.++++.+.+
T Consensus 91 ~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~ 134 (234)
T 1vpa_A 91 RSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARE 134 (234)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHh
Confidence 455677787765111368999999998 5699999999987743
Done!