BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044523
MGCSSSNSSRSEVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFR
QMNISVPVDPLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK

High Scoring Gene Products

Symbol, full name Information P value
AT1G78895 protein from Arabidopsis thaliana 3.6e-41
AT1G16825 protein from Arabidopsis thaliana 7.0e-38

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044523
        (112 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006229 - symbol:AT1G78895 species:3702 "Ara...   437  3.6e-41   1
TAIR|locus:5019474612 - symbol:AT1G16825 "AT1G16825" spec...   406  7.0e-38   1


>TAIR|locus:505006229 [details] [associations]
            symbol:AT1G78895 species:3702 "Arabidopsis thaliana"
            [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
            PROSITE:PS50845 GO:GO:0016021 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005789 EMBL:AC005679 EMBL:AK118839
            EMBL:BT005457 EMBL:AK228956 EMBL:AY085180 IPI:IPI00529704
            RefSeq:NP_565194.1 UniGene:At.34221 PaxDb:Q8GWH5 PRIDE:Q8GWH5
            EnsemblPlants:AT1G78895.1 GeneID:844227 KEGG:ath:AT1G78895
            TAIR:At1g78895 eggNOG:NOG325917 HOGENOM:HOG000090796
            InParanoid:Q8GWH5 OMA:YYHCAYR PhylomeDB:Q8GWH5
            ProtClustDB:CLSN2689312 Genevestigator:Q8GWH5 Uniprot:Q8GWH5
        Length = 164

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 85/101 (84%), Positives = 96/101 (95%)

Query:    12 EVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPL 71
             E+GKA+G+LI G+LVYYHCAYRN++LLSL SDVFIVLLCSLAILGLLFRQ+N+SVPVDPL
Sbjct:     3 EMGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPVDPL 62

Query:    72 EWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
             EWQISQ+TA++IVA LANTVGAAE VLRVAATGHDKRLF K
Sbjct:    63 EWQISQDTASNIVARLANTVGAAEGVLRVAATGHDKRLFVK 103


>TAIR|locus:5019474612 [details] [associations]
            symbol:AT1G16825 "AT1G16825" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005789 EMBL:AC026237
            eggNOG:NOG325917 HOGENOM:HOG000090796 EMBL:BX817960 IPI:IPI00929946
            RefSeq:NP_001154345.1 UniGene:At.74555 EnsemblPlants:AT1G16825.1
            GeneID:7922362 KEGG:ath:AT1G16825 KEGG:dosa:Os08t0225100-00
            TAIR:At1g16825 PhylomeDB:P0C941 Genevestigator:P0C941
            Uniprot:P0C941
        Length = 155

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 82/101 (81%), Positives = 93/101 (92%)

Query:    12 EVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPL 71
             E+GKA+G+LI G+LVY+HCA RN++LLSLISDV IVLL SLAILGLLFR +N+SVPVDPL
Sbjct:     3 EMGKAIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPVDPL 62

Query:    72 EWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
             EWQISQ+TA +IVA LANTVGAAESVLRVAATGHDKRLF K
Sbjct:    63 EWQISQDTACNIVARLANTVGAAESVLRVAATGHDKRLFVK 103


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.134   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      112       112   0.00091  102 3  11 22  0.40    30
                                                     29  0.43    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  556 (59 KB)
  Total size of DFA:  118 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.23u 0.10s 11.33t   Elapsed:  00:00:00
  Total cpu time:  11.23u 0.10s 11.33t   Elapsed:  00:00:00
  Start:  Mon May 20 16:13:48 2013   End:  Mon May 20 16:13:48 2013

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