BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044523
(112 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449513551|ref|XP_004164355.1| PREDICTED: reticulon-like protein B22-like [Cucumis sativus]
Length = 188
Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 88/109 (80%), Positives = 100/109 (91%)
Query: 4 SSSNSSRSEVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMN 63
S S + ++EVGK LICGSLVYYHCA+RNSSLLSL++DVFIVLLCSLAILGLLFR MN
Sbjct: 19 SRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMN 78
Query: 64 ISVPVDPLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
+SVPVDPLEWQ+SQ+TANS++AWLANT+GAAESVLRVAATGHDKRLF K
Sbjct: 79 VSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVK 127
>gi|388521445|gb|AFK48784.1| unknown [Lotus japonicus]
Length = 183
Score = 183 bits (465), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 87/109 (79%), Positives = 99/109 (90%)
Query: 4 SSSNSSRSEVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMN 63
+++ E+GKA+ L+CG+LVYYHCAYRNS+++SL SDVFIVLLCSLAILGLLFRQMN
Sbjct: 12 KTTSVGEREMGKAIIALVCGTLVYYHCAYRNSTVVSLFSDVFIVLLCSLAILGLLFRQMN 71
Query: 64 ISVPVDPLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
I VPVDPLEWQISQ+TAN+IVA LANTVGAAESVLRVAATGHDKRLFFK
Sbjct: 72 IQVPVDPLEWQISQDTANAIVACLANTVGAAESVLRVAATGHDKRLFFK 120
>gi|225443379|ref|XP_002266544.1| PREDICTED: reticulon-like protein B22 [Vitis vinifera]
gi|297735759|emb|CBI18446.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/103 (81%), Positives = 98/103 (95%)
Query: 10 RSEVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVD 69
R+E+GK + V+ICG+L+YYHCAYRNS+LL+L+SDV IVLLCSLAILGLLFRQ+NISVPVD
Sbjct: 4 RAEIGKPVIVMICGTLIYYHCAYRNSTLLTLVSDVLIVLLCSLAILGLLFRQINISVPVD 63
Query: 70 PLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
PLEWQISQ+TAN+IVA +ANT+GAAESVLRVAATGHDKRLF K
Sbjct: 64 PLEWQISQDTANNIVACMANTIGAAESVLRVAATGHDKRLFVK 106
>gi|388508580|gb|AFK42356.1| unknown [Medicago truncatula]
Length = 180
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 95/104 (91%)
Query: 9 SRSEVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPV 68
R E+GKA+ L+CG+LVYYHCA++NS+++SL SDVFIVLLCSLAILGLLFRQM I VPV
Sbjct: 15 KRIEIGKAIIALVCGTLVYYHCAFKNSAIVSLFSDVFIVLLCSLAILGLLFRQMTIQVPV 74
Query: 69 DPLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
DPLEWQISQ+TAN+IVA ANTVGAAESVLRVAATGHDKRLFFK
Sbjct: 75 DPLEWQISQDTANTIVASFANTVGAAESVLRVAATGHDKRLFFK 118
>gi|297842673|ref|XP_002889218.1| hypothetical protein ARALYDRAFT_895790 [Arabidopsis lyrata subsp.
lyrata]
gi|297335059|gb|EFH65477.1| hypothetical protein ARALYDRAFT_895790 [Arabidopsis lyrata subsp.
lyrata]
Length = 164
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/101 (84%), Positives = 96/101 (95%)
Query: 12 EVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPL 71
E+GKA+G+LI G+LVYYHCAYRN++LLSL SDVFIVLLCSLAILGLLFRQ+N+SVPVDPL
Sbjct: 3 EMGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPVDPL 62
Query: 72 EWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
EWQISQ+TA+SI+A LANTVGAAE VLRVAATGHDKRLF K
Sbjct: 63 EWQISQDTASSIIARLANTVGAAEGVLRVAATGHDKRLFVK 103
>gi|18412164|ref|NP_565194.1| reticulon-like protein B22 [Arabidopsis thaliana]
gi|75150974|sp|Q8GWH5.1|RTNLT_ARATH RecName: Full=Reticulon-like protein B22; Short=AtRTNLB22
gi|26452691|dbj|BAC43428.1| unknown protein [Arabidopsis thaliana]
gi|28973105|gb|AAO63877.1| unknown protein [Arabidopsis thaliana]
gi|332198049|gb|AEE36170.1| reticulon-like protein B22 [Arabidopsis thaliana]
Length = 164
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/101 (84%), Positives = 96/101 (95%)
Query: 12 EVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPL 71
E+GKA+G+LI G+LVYYHCAYRN++LLSL SDVFIVLLCSLAILGLLFRQ+N+SVPVDPL
Sbjct: 3 EMGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPVDPL 62
Query: 72 EWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
EWQISQ+TA++IVA LANTVGAAE VLRVAATGHDKRLF K
Sbjct: 63 EWQISQDTASNIVARLANTVGAAEGVLRVAATGHDKRLFVK 103
>gi|255544504|ref|XP_002513313.1| conserved hypothetical protein [Ricinus communis]
gi|223547221|gb|EEF48716.1| conserved hypothetical protein [Ricinus communis]
Length = 169
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/105 (83%), Positives = 100/105 (95%)
Query: 8 SSRSEVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVP 67
+ ++E+GKA+ ++CG+LVYYHCAYRN+SLLSL+SDV IVLLCSLAILGLLFRQMNISVP
Sbjct: 5 NKKNEMGKAIIGMVCGTLVYYHCAYRNASLLSLLSDVLIVLLCSLAILGLLFRQMNISVP 64
Query: 68 VDPLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
VDPLEWQISQ+TANSIVAW ANT+GAAESVLRVAATGHDKRLFFK
Sbjct: 65 VDPLEWQISQDTANSIVAWFANTIGAAESVLRVAATGHDKRLFFK 109
>gi|356521592|ref|XP_003529438.1| PREDICTED: reticulon-like protein B22-like [Glycine max]
Length = 173
Score = 177 bits (449), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/115 (76%), Positives = 97/115 (84%), Gaps = 4/115 (3%)
Query: 2 GCSSSNSSRSE----VGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGL 57
G + S S RS +GKA+ L+ GSLVYYHCAYRNS+L+SL SDVFIVLLCSLAILGL
Sbjct: 3 GRNGSGSRRSGEAGGMGKAIIALVIGSLVYYHCAYRNSTLVSLFSDVFIVLLCSLAILGL 62
Query: 58 LFRQMNISVPVDPLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
LFRQM I VPVDPLEWQISQE+AN+IVAWLANT+G AESV RVAATGHDKRLF K
Sbjct: 63 LFRQMGIQVPVDPLEWQISQESANAIVAWLANTIGGAESVFRVAATGHDKRLFLK 117
>gi|21537390|gb|AAM61731.1| unknown [Arabidopsis thaliana]
Length = 161
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 95/100 (95%)
Query: 13 VGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPLE 72
+GKA+G+LI G+LVYYHCAYRN++LLSL SDVFIVLLCSLAILGLLFRQ+N+SVPVDPLE
Sbjct: 1 MGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPVDPLE 60
Query: 73 WQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
WQISQ+TA++IVA LANTVGAAE VLRVAATGHDKRLF K
Sbjct: 61 WQISQDTASNIVARLANTVGAAEGVLRVAATGHDKRLFVK 100
>gi|110737813|dbj|BAF00845.1| hypothetical protein [Arabidopsis thaliana]
Length = 164
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/101 (83%), Positives = 95/101 (94%)
Query: 12 EVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPL 71
E+GKA+G+LI G+LVYYHCAYRN++LLSL SDVFIVLLCSLAILGLLFRQ+N+SVPV PL
Sbjct: 3 EMGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPVGPL 62
Query: 72 EWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
EWQISQ+TA++IVA LANTVGAAE VLRVAATGHDKRLF K
Sbjct: 63 EWQISQDTASNIVARLANTVGAAEGVLRVAATGHDKRLFVK 103
>gi|217074308|gb|ACJ85514.1| unknown [Medicago truncatula]
Length = 180
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/104 (79%), Positives = 94/104 (90%)
Query: 9 SRSEVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPV 68
R E+GKA+ L+CG+LVYYHCA++NS+++SL SDVFIVLLCSLAILGLLFRQM I VPV
Sbjct: 15 KRIEIGKAIIALVCGTLVYYHCAFKNSAIVSLFSDVFIVLLCSLAILGLLFRQMTIQVPV 74
Query: 69 DPLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
DPLE QISQ+TAN+IVA ANTVGAAESVLRVAATGHDKRLFFK
Sbjct: 75 DPLERQISQDTANTIVASFANTVGAAESVLRVAATGHDKRLFFK 118
>gi|224100485|ref|XP_002311895.1| predicted protein [Populus trichocarpa]
gi|222851715|gb|EEE89262.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/93 (88%), Positives = 89/93 (95%)
Query: 20 LICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPLEWQISQET 79
L+ G+LVYYHCAYR+SSL SL+SDV IVLLCSLAILGLLFRQ+NISVPVDPLEWQISQ+T
Sbjct: 29 LVSGTLVYYHCAYRDSSLFSLMSDVLIVLLCSLAILGLLFRQLNISVPVDPLEWQISQDT 88
Query: 80 ANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
ANSIVAW ANT+GAAESVLRVAATGHDKRLFFK
Sbjct: 89 ANSIVAWFANTIGAAESVLRVAATGHDKRLFFK 121
>gi|238478504|ref|NP_001154345.1| reticulon-like protein [Arabidopsis thaliana]
gi|229891661|sp|P0C941.1|RTNLU_ARATH RecName: Full=Reticulon-like protein B23; Short=AtRTNLB23
gi|332191382|gb|AEE29503.1| reticulon-like protein [Arabidopsis thaliana]
Length = 155
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/101 (81%), Positives = 93/101 (92%)
Query: 12 EVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPL 71
E+GKA+G+LI G+LVY+HCA RN++LLSLISDV IVLL SLAILGLLFR +N+SVPVDPL
Sbjct: 3 EMGKAIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPVDPL 62
Query: 72 EWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
EWQISQ+TA +IVA LANTVGAAESVLRVAATGHDKRLF K
Sbjct: 63 EWQISQDTACNIVARLANTVGAAESVLRVAATGHDKRLFVK 103
>gi|297844618|ref|XP_002890190.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336032|gb|EFH66449.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 741
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/101 (80%), Positives = 94/101 (93%)
Query: 12 EVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPL 71
E+GKA+G+L+ G+LVY+HCA RN++LLSL+SDV IVLL SLAILGLLFRQ+N+SVPVDPL
Sbjct: 3 EMGKAIGLLLSGTLVYHHCANRNATLLSLLSDVLIVLLSSLAILGLLFRQLNVSVPVDPL 62
Query: 72 EWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
EWQISQ+TA +IVA LANTVGAAESVLRVAATGHDKRLF K
Sbjct: 63 EWQISQDTACNIVARLANTVGAAESVLRVAATGHDKRLFVK 103
>gi|294463079|gb|ADE77077.1| unknown [Picea sitchensis]
Length = 172
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/99 (75%), Positives = 86/99 (86%)
Query: 14 GKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPLEW 73
G L +LICGSLVYYHCA NSS++SL+ DV IVLLCS A+LG+LFRQMN+SVPVDPLEW
Sbjct: 12 GMPLVLLICGSLVYYHCAICNSSMVSLLCDVLIVLLCSFAVLGMLFRQMNVSVPVDPLEW 71
Query: 74 QISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
QISQETAN I A +ANT+GA ESVLRVAA+GHDK+LF K
Sbjct: 72 QISQETANKIAACMANTIGATESVLRVAASGHDKKLFLK 110
>gi|449452090|ref|XP_004143793.1| PREDICTED: LOW QUALITY PROTEIN: reticulon-like protein B22-like
[Cucumis sativus]
Length = 199
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 96/121 (79%), Gaps = 13/121 (10%)
Query: 4 SSSNSSRSEVGKALGVLICGSLVYYHCAYR------NSSLLSLISDVFIVLLCSLAILGL 57
S S + ++EVGK LICGSLVYYHCA++ NSSLLSL++DVFIVLLCSLAILGL
Sbjct: 19 SRSINCKTEVGKPFVALICGSLVYYHCAFKFQSSLRNSSLLSLVADVFIVLLCSLAILGL 78
Query: 58 LFRQMNISVPVDPLE------WQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFF 111
LFR VPVDPLE WQ+SQ+TANS++AWLANT+GAAESVLRVAATGHDKRLF
Sbjct: 79 LFRHF-FPVPVDPLEASIAGYWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV 137
Query: 112 K 112
K
Sbjct: 138 K 138
>gi|302822889|ref|XP_002993100.1| hypothetical protein SELMODRAFT_49228 [Selaginella moellendorffii]
gi|300139100|gb|EFJ05848.1| hypothetical protein SELMODRAFT_49228 [Selaginella moellendorffii]
Length = 118
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 75/94 (79%)
Query: 19 VLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPLEWQISQE 78
VL CGSL+YYHC RN SL+SL DV IVL+ SLAILGL FR NI+VPVDPLEWQ+S+E
Sbjct: 1 VLACGSLLYYHCTARNCSLVSLTCDVVIVLVSSLAILGLAFRNFNIAVPVDPLEWQVSEE 60
Query: 79 TANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
A SI A +ANTVGA E VLRVAA+G D +LFFK
Sbjct: 61 CATSIAACIANTVGATEGVLRVAASGSDYKLFFK 94
>gi|413917110|gb|AFW57042.1| hypothetical protein ZEAMMB73_619618 [Zea mays]
Length = 154
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/92 (80%), Positives = 83/92 (90%)
Query: 21 ICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPLEWQISQETA 80
+CG LVYYHCA R +S +SL +DV +VLLCSL+ILGLLFR ++ISVPVDPLEWQISQE A
Sbjct: 34 VCGGLVYYHCAVRRASAVSLAADVLLVLLCSLSILGLLFRHLHISVPVDPLEWQISQEMA 93
Query: 81 NSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
NSIVA LANTVGAAESVLRVAATGHDK+LFFK
Sbjct: 94 NSIVASLANTVGAAESVLRVAATGHDKKLFFK 125
>gi|38637178|dbj|BAD03430.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 135
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/92 (79%), Positives = 83/92 (90%)
Query: 21 ICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPLEWQISQETA 80
+CG LVYYHCA R +S +SL +DV +VLLCSL+ILGLLFR ++ISVPVDPLEWQISQE A
Sbjct: 30 VCGGLVYYHCAVRRASAVSLAADVLLVLLCSLSILGLLFRHLHISVPVDPLEWQISQEMA 89
Query: 81 NSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
NSIVA LANT+GAAESVLRVAATGHDK+LFFK
Sbjct: 90 NSIVASLANTIGAAESVLRVAATGHDKKLFFK 121
>gi|222640125|gb|EEE68257.1| hypothetical protein OsJ_26467 [Oryza sativa Japonica Group]
Length = 199
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/92 (79%), Positives = 83/92 (90%)
Query: 21 ICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPLEWQISQETA 80
+CG LVYYHCA R +S +SL +DV +VLLCSL+ILGLLFR ++ISVPVDPLEWQISQE A
Sbjct: 94 VCGGLVYYHCAVRRASAVSLAADVLLVLLCSLSILGLLFRHLHISVPVDPLEWQISQEMA 153
Query: 81 NSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
NSIVA LANT+GAAESVLRVAATGHDK+LFFK
Sbjct: 154 NSIVASLANTIGAAESVLRVAATGHDKKLFFK 185
>gi|293334621|ref|NP_001168414.1| uncharacterized protein LOC100382184 [Zea mays]
gi|223948109|gb|ACN28138.1| unknown [Zea mays]
gi|413917111|gb|AFW57043.1| hypothetical protein ZEAMMB73_619618 [Zea mays]
Length = 186
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/92 (80%), Positives = 83/92 (90%)
Query: 21 ICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPLEWQISQETA 80
+CG LVYYHCA R +S +SL +DV +VLLCSL+ILGLLFR ++ISVPVDPLEWQISQE A
Sbjct: 34 VCGGLVYYHCAVRRASAVSLAADVLLVLLCSLSILGLLFRHLHISVPVDPLEWQISQEMA 93
Query: 81 NSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
NSIVA LANTVGAAESVLRVAATGHDK+LFFK
Sbjct: 94 NSIVASLANTVGAAESVLRVAATGHDKKLFFK 125
>gi|242080925|ref|XP_002445231.1| hypothetical protein SORBIDRAFT_07g006400 [Sorghum bicolor]
gi|241941581|gb|EES14726.1| hypothetical protein SORBIDRAFT_07g006400 [Sorghum bicolor]
Length = 186
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/92 (79%), Positives = 83/92 (90%)
Query: 21 ICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPLEWQISQETA 80
+CG LVYYHCA R +S +SL +DV +VLLCSL+ILGLLFR ++ISVPVDPLEWQISQE A
Sbjct: 34 VCGGLVYYHCAVRRASAVSLAADVLLVLLCSLSILGLLFRHLHISVPVDPLEWQISQEMA 93
Query: 81 NSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
NSIVA LANT+GAAESVLRVAATGHDK+LFFK
Sbjct: 94 NSIVASLANTIGAAESVLRVAATGHDKKLFFK 125
>gi|226508802|ref|NP_001143334.1| uncharacterized protein LOC100275931 [Zea mays]
gi|195618172|gb|ACG30916.1| hypothetical protein [Zea mays]
Length = 184
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/92 (79%), Positives = 83/92 (90%)
Query: 21 ICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPLEWQISQETA 80
+CG LVYYHCA R +S +SL +DV +VLLCSL+ILGLLFR ++ISVPVDPLEWQISQE A
Sbjct: 32 VCGGLVYYHCAVRRASAVSLAADVLLVLLCSLSILGLLFRHLHISVPVDPLEWQISQEMA 91
Query: 81 NSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
NSIVA LANTVGAA+SVLRVAATGHDK+LFFK
Sbjct: 92 NSIVASLANTVGAADSVLRVAATGHDKKLFFK 123
>gi|326500190|dbj|BAK06184.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 193
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 82/92 (89%)
Query: 21 ICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPLEWQISQETA 80
+CG LVYYHCA R +S +SL +DV +VLLCSL+ILGLLFR ++ISVPVDPLEWQISQE A
Sbjct: 42 VCGGLVYYHCAVRRASAVSLAADVLLVLLCSLSILGLLFRHLHISVPVDPLEWQISQEMA 101
Query: 81 NSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
NSIVA LANT+GAAESVLRVAATGHDK+L FK
Sbjct: 102 NSIVASLANTIGAAESVLRVAATGHDKKLLFK 133
>gi|168033754|ref|XP_001769379.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679299|gb|EDQ65748.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 92
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 22 CGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISV-PVDPLEWQISQETA 80
CGSLVYYHC +RN +++SLISDV V+ SLA+LGL+FR N+++ P+DP EWQIS ETA
Sbjct: 1 CGSLVYYHCGFRNLNMVSLISDVLFVITWSLAVLGLIFRSFNLTILPMDPAEWQISPETA 60
Query: 81 NSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
N I A +AN +GA ESVLRVAA+G DK+LF K
Sbjct: 61 NCIAATVANVLGALESVLRVAASGSDKKLFLK 92
>gi|147790080|emb|CAN64850.1| hypothetical protein VITISV_024609 [Vitis vinifera]
Length = 244
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 89/163 (54%), Gaps = 60/163 (36%)
Query: 10 RSEVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFI------------VLLCSLA---- 53
R+E+GK + V+ICG+L+YYHCAYRNS+LL+L+SDV I V+ C +A
Sbjct: 57 RAEIGKPVIVMICGTLIYYHCAYRNSTLLTLVSDVLIVLLCSLAILGAFVIYCGIARCLD 116
Query: 54 --ILGLLFRQMN------------------------------------------ISVPVD 69
+G F Q+ VPVD
Sbjct: 117 AGKMGEKFTQLRQVLGDLLWHWAPFGCCETLEKDVGQKDEALTGLEEGKIGEIYTRVPVD 176
Query: 70 PLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
PLEWQISQ+TAN+IVA +ANT+GAAESVLRVAATGHDKRLF K
Sbjct: 177 PLEWQISQDTANNIVACMANTIGAAESVLRVAATGHDKRLFVK 219
>gi|357145237|ref|XP_003573572.1| PREDICTED: reticulon-like protein B22-like [Brachypodium
distachyon]
Length = 193
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 81/92 (88%)
Query: 21 ICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPLEWQISQETA 80
+CG LVYYHCA R +S +SL +DV +VLLCSL+ILGLLFR ++I+VPVDPLEWQISQE A
Sbjct: 41 VCGGLVYYHCAVRRASAVSLAADVLLVLLCSLSILGLLFRHLHITVPVDPLEWQISQEMA 100
Query: 81 NSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
NSIVA LANT+GAAESVLRVAATGHDK+L K
Sbjct: 101 NSIVASLANTIGAAESVLRVAATGHDKKLLLK 132
>gi|168005018|ref|XP_001755208.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693801|gb|EDQ80152.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
Query: 16 ALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISV-PVDPLEWQ 74
AL VL CGSLVYYHC +R +++SLISDV V+ SLA+LGL+FR N+++ P+D EWQ
Sbjct: 2 ALMVLACGSLVYYHCEFRYLNMVSLISDVLFVISWSLAVLGLIFRSFNLTILPMDAAEWQ 61
Query: 75 ISQETANSIVAWLANTVGAAESVLRVAATGHD 106
IS ETAN I A +AN VGA ESVLRVAA+G D
Sbjct: 62 ISPETANCIAATVANVVGALESVLRVAASGSD 93
>gi|255639111|gb|ACU19855.1| unknown [Glycine max]
Length = 107
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 46/51 (90%)
Query: 62 MNISVPVDPLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
M I VPVDPLEWQISQE+AN+IVAWLANT+G AESV RVAATGHDKRLF K
Sbjct: 1 MGIQVPVDPLEWQISQESANAIVAWLANTIGGAESVFRVAATGHDKRLFLK 51
>gi|218191196|gb|EEC73623.1| hypothetical protein OsI_08126 [Oryza sativa Indica Group]
Length = 81
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 50/64 (78%)
Query: 49 LCSLAILGLLFRQMNISVPVDPLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKR 108
L L +L + F VPVDPLEWQISQE ANSIVA LANT+GAAESVLRVAATGHDK+
Sbjct: 4 LTILILLSIFFFIFACRVPVDPLEWQISQEMANSIVASLANTIGAAESVLRVAATGHDKK 63
Query: 109 LFFK 112
LF K
Sbjct: 64 LFLK 67
>gi|37549278|gb|AAQ93077.1| putative TIR-NBS type R protein 11 [Malus x domestica]
Length = 634
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 8/57 (14%)
Query: 11 SEVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVP 67
S +GK L +++ L+ YH A+RNS L + DV I LLCSL GL+FRQMNISVP
Sbjct: 5 SSLGKLLIMVLV--LLSYHYAHRNSGL---VFDVLIFLLCSL---GLVFRQMNISVP 53
>gi|37574595|gb|AAQ93074.1| putative TIR-NBS type R protein 4 [Malus baccata]
Length = 726
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 8/57 (14%)
Query: 11 SEVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVP 67
S +GK L +++ L+ YH A+RN L + DV I LLCSL GL+FRQMNIS+P
Sbjct: 8 SSLGKLLIMVLV--LLSYHYAHRNCGL---VFDVLIFLLCSL---GLVFRQMNISIP 56
>gi|37574599|gb|AAQ93076.1| putative TIR-NBS type R protein 4 [Malus baccata]
Length = 726
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 8/57 (14%)
Query: 11 SEVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVP 67
S +GK L +++ L+ YH A+RN L + DV I LLCSL GL+FRQMNIS+P
Sbjct: 8 SSLGKLLIMVLV--LLSYHYAHRNCGL---VFDVLIFLLCSL---GLVFRQMNISIP 56
>gi|302822762|ref|XP_002993037.1| hypothetical protein SELMODRAFT_136377 [Selaginella moellendorffii]
gi|300139129|gb|EFJ05876.1| hypothetical protein SELMODRAFT_136377 [Selaginella moellendorffii]
Length = 215
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 15 KALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPLEWQ 74
K++G+L +LV++ + +L+SL++++ + LL +L L +N +P P E Q
Sbjct: 45 KSIGILGGSTLVWFIFEWSGYTLISLVANIVLFLLIALFAWANLAALVNRPLPPVP-EVQ 103
Query: 75 ISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
+S E +N I +A V + R +TG D + K
Sbjct: 104 LSDEKSNKIAKRVAKEVNGVLNYARSLSTGKDFPMLLK 141
>gi|302780705|ref|XP_002972127.1| hypothetical protein SELMODRAFT_96839 [Selaginella moellendorffii]
gi|300160426|gb|EFJ27044.1| hypothetical protein SELMODRAFT_96839 [Selaginella moellendorffii]
Length = 217
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 15 KALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVDPLEWQ 74
K++G+L +LV++ + +L+SL++++ + LL +L L +N +P P E Q
Sbjct: 45 KSIGILGGSTLVWFVFEWSGYTLISLVANIVLFLLIALFAWANLAALVNRPLPPVP-EVQ 103
Query: 75 ISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
+S E +N I +A V + R +TG D + K
Sbjct: 104 LSDEKSNKIAKRVAKEVNGVLNYARSLSTGKDFPMLLK 141
>gi|297608183|ref|NP_001061282.2| Os08g0225100 [Oryza sativa Japonica Group]
gi|255678247|dbj|BAF23196.2| Os08g0225100 [Oryza sativa Japonica Group]
Length = 116
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 21 ICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNIS 65
+CG LVYYHCA R +S +SL +DV +VLLCSL+ILGLLFR ++IS
Sbjct: 30 VCGGLVYYHCAVRRASAVSLAADVLLVLLCSLSILGLLFRHLHIS 74
>gi|334326766|ref|XP_003340798.1| PREDICTED: LOW QUALITY PROTEIN: adenomatous polyposis coli protein
2-like [Monodelphis domestica]
Length = 2420
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 68 VDPLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFF 111
+D +EWQ Q+ ANSIV WL AA S R ++ D L F
Sbjct: 1810 LDSVEWQAIQDGANSIVTWLHQAAAAATSFSREPSSESDSILSF 1853
>gi|395513317|ref|XP_003760873.1| PREDICTED: adenomatous polyposis coli protein 2 [Sarcophilus
harrisii]
Length = 2397
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 68 VDPLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFF 111
+D +EWQ Q+ ANSIV WL AA S+ R ++ D L F
Sbjct: 1820 LDSVEWQAIQDGANSIVTWLHQAAAAATSLSREPSSECDSILSF 1863
>gi|255573897|ref|XP_002527867.1| 3-beta-hydroxy-delta5-steroid dehydrogenase, putative [Ricinus
communis]
gi|223532718|gb|EEF34498.1| 3-beta-hydroxy-delta5-steroid dehydrogenase, putative [Ricinus
communis]
Length = 209
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 36 SLLSLISDVFIVLLCSLAILGLLFRQMNI-SVPVDPL-EWQISQETANSIVAWLANTVGA 93
+LLSL S V ++L+ AIL L + I + P PL E +S+E AN + +++ V
Sbjct: 55 TLLSLFSSVVLLLV---AILFLWAKSAAILNRPAPPLPELHLSEEMANEVASFIRTHVND 111
Query: 94 AESVLRVAATGHDKRLFFK 112
SV + A G D RLFFK
Sbjct: 112 FLSVSQDIALGKDTRLFFK 130
>gi|330836996|ref|YP_004411637.1| pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
[Sphaerochaeta coccoides DSM 17374]
gi|329748899|gb|AEC02255.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
[Sphaerochaeta coccoides DSM 17374]
Length = 171
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 16 ALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCS 51
L +++CG +VY+HCA L +L +D ++L C+
Sbjct: 48 PLNIVLCGEIVYFHCAREGHKLDNLRADPRVILSCT 83
>gi|417844636|ref|ZP_12490677.1| Hypothetical protein GGE_0379 [Haemophilus haemolyticus M21639]
gi|341956595|gb|EGT83016.1| Hypothetical protein GGE_0379 [Haemophilus haemolyticus M21639]
Length = 319
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 15/79 (18%)
Query: 19 VLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMN--ISVPVDPLEWQIS 76
V+IC L YH ++ S ++F +LL + + G F + + V +DP E+QIS
Sbjct: 111 VMICFMLALYHFLFKKES-----QNIFFLLLVGI-VFGTFFGSLTTFMEVLIDPNEFQIS 164
Query: 77 QETA-------NSIVAWLA 88
Q+ N+ + WLA
Sbjct: 165 QDIGFASFNRINTHILWLA 183
>gi|42566117|ref|NP_191715.2| reticulon-like protein B6 [Arabidopsis thaliana]
gi|75120709|sp|Q6DBN4.1|RTNLF_ARATH RecName: Full=Reticulon-like protein B6; Short=AtRTNLB6
gi|50198812|gb|AAT70439.1| At3g61560 [Arabidopsis thaliana]
gi|56381963|gb|AAV85700.1| At3g61560 [Arabidopsis thaliana]
gi|332646701|gb|AEE80222.1| reticulon-like protein B6 [Arabidopsis thaliana]
Length = 253
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 9 SRSEVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPV 68
S S +G A + + LV YH LSL+ + I L +L +L MN + P
Sbjct: 80 SASVLGVATAIWVLFELVEYH-------FLSLVCHILIFALAALFLLSNAHAFMNKTPPK 132
Query: 69 DPLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLF 110
P E I +E IV+ L N + A +LR A G D + F
Sbjct: 133 IP-EIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKF 173
>gi|355576016|ref|ZP_09045389.1| hypothetical protein HMPREF1008_01366 [Olsenella sp. oral taxon 809
str. F0356]
gi|354817232|gb|EHF01742.1| hypothetical protein HMPREF1008_01366 [Olsenella sp. oral taxon 809
str. F0356]
Length = 399
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Query: 4 SSSNSSRSEVGKALGVLICGSLVYYHCAYR---NSSLLSLISDVFIVLLCSLAILGLLFR 60
++++ +R VG A+G+L G+ Y YR N S L++DV ++L+ S+ LG+
Sbjct: 61 ANASFARHLVGIAIGLL--GAYGMYRYDYRALANMSKALLVADVILMLMPSVPGLGVSAL 118
Query: 61 QMN--ISVPVDPLEWQISQETANSIVAWLANTVGA 93
M + VP+ PL +Q S E A + +L ++GA
Sbjct: 119 GMTGWVKVPLIPLRFQPS-EPAKLVTIFLMASLGA 152
>gi|125528401|gb|EAY76515.1| hypothetical protein OsI_04457 [Oryza sativa Indica Group]
Length = 203
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 10 RSEVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVD 69
R EV + S V ++C +LLS +S V +++L L + R +N P
Sbjct: 34 RKEVAGWSLAAVAASWVLFYC-LPGYTLLSFVSSVLMIVLAVLFVWAKAARLLNRPPPPV 92
Query: 70 PLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
PL +IS+++ + A + N + A A G D LF+K
Sbjct: 93 PLI-KISEDSMSKAAAAVGNILHKALQGFENIAHGKDSSLFYK 134
>gi|297720587|ref|NP_001172655.1| Os01g0851300 [Oryza sativa Japonica Group]
gi|56784501|dbj|BAD82652.1| 24 kDa seed maturation protein-like [Oryza sativa Japonica Group]
gi|125572650|gb|EAZ14165.1| hypothetical protein OsJ_04095 [Oryza sativa Japonica Group]
gi|215678782|dbj|BAG95219.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673879|dbj|BAH91385.1| Os01g0851300 [Oryza sativa Japonica Group]
Length = 203
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 10 RSEVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPVD 69
R EV + S V ++C +LLS +S V +++L L + R +N P
Sbjct: 34 RKEVAGWSLAAVAASWVLFYC-LPGYTLLSFVSSVLMIVLVVLFVWAKAARLLNRPPPPV 92
Query: 70 PLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLFFK 112
PL +IS+++ + A + N + A A G D LF+K
Sbjct: 93 PLI-KISEDSMSKAAAAVGNILHKALQGFENIAHGKDSSLFYK 134
>gi|297817476|ref|XP_002876621.1| reticulon family protein [Arabidopsis lyrata subsp. lyrata]
gi|297322459|gb|EFH52880.1| reticulon family protein [Arabidopsis lyrata subsp. lyrata]
Length = 254
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 9 SRSEVGKALGVLICGSLVYYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFRQMNISVPV 68
S S +G A + + LV YH LSL+ + I L +L +L MN + P
Sbjct: 81 SASVLGVATAIWVLFELVEYH-------FLSLVCHILIFALGALFLLSNAHAFMNKTPPK 133
Query: 69 DPLEWQISQETANSIVAWLANTVGAAESVLRVAATGHDKRLF 110
P E I +E IV+ L N + A +LR A G D + F
Sbjct: 134 IP-EIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKF 174
>gi|23100235|ref|NP_693702.1| hypothetical protein OB2780 [Oceanobacillus iheyensis HTE831]
gi|22778467|dbj|BAC14736.1| hypothetical protein [Oceanobacillus iheyensis HTE831]
Length = 406
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 27 YYHCAYRNSSLLSLISDVFIVLLCSLAILGLLFR-QMNISVPVDPLEWQISQE---TANS 82
Y Y +++L+L++ V + L IL +LF +NI +P++ LE QI++E T+
Sbjct: 290 YVRKLYNATTVLTLLATVCLYYL----ILYILFTFAVNIFIPIELLEAQINEEVNFTSYL 345
Query: 83 IVAWLANTVGAAESVLRVAATGHD 106
+AWLA ++ L A D
Sbjct: 346 YIAWLATSIATIIGALGSALEDED 369
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,499,185,452
Number of Sequences: 23463169
Number of extensions: 46916169
Number of successful extensions: 202948
Number of sequences better than 100.0: 72
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 202897
Number of HSP's gapped (non-prelim): 73
length of query: 112
length of database: 8,064,228,071
effective HSP length: 80
effective length of query: 32
effective length of database: 6,187,174,551
effective search space: 197989585632
effective search space used: 197989585632
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 69 (31.2 bits)