Your job contains 1 sequence.
>044525
MLTPSATPGGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKLEQRRQ
AELRRNLRLGLTSLPQPTNEYQIVVQPPAEEDEEPEEKIEEDMSDRLAREKAEEEARQQA
LLRKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPPTSIEQADEIIRKELLKLLE
HDNAKYPLDEKVAKKKKGNKRSANGPTAPIPVIEDFEEDELQESFTLLSDSRLNVQKRAE
NLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTLQQRYG
DLSTELERISRLIAERREQAQKAAEEKRALELAEAQATANQAAEQVSEASESLPSEELGS
SMAVDPPCDETTGQQINTAHMDIDSGKEHTAAVTDGCLSDTVPSFEEGKLPSHGVAVDTS
GSSEVVKEDPAVDQQNVVEASNRNDALTKQESIAQETAKDDGFADESANKVHGAEFDKAN
LAAKELEAKDNLPLLNGDSTDK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044525
(502 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024336 - symbol:CDC5 "cell division cycle 5" ... 660 1.1e-84 3
ZFIN|ZDB-GENE-040426-821 - symbol:cdc5l "CDC5 cell divisi... 230 4.1e-16 1
UNIPROTKB|E1BWQ5 - symbol:CDC5L "Uncharacterized protein"... 195 3.6e-12 1
UNIPROTKB|E1C6A9 - symbol:CDC5L "Uncharacterized protein"... 195 3.6e-12 1
UNIPROTKB|E2RLP4 - symbol:CDC5L "Uncharacterized protein"... 192 7.6e-12 1
UNIPROTKB|Q99459 - symbol:CDC5L "Cell division cycle 5-li... 192 7.6e-12 1
MGI|MGI:1918952 - symbol:Cdc5l "cell division cycle 5-lik... 191 9.9e-12 1
RGD|70892 - symbol:Cdc5l "cell division cycle 5-like" spe... 190 1.3e-11 1
UNIPROTKB|Q2KJC1 - symbol:CDC5L "Cell division cycle 5-li... 189 1.6e-11 1
UNIPROTKB|F1RQS5 - symbol:CDC5L "Uncharacterized protein"... 189 1.6e-11 1
POMBASE|SPAC644.12 - symbol:cdc5 "cell division control p... 122 1.1e-06 2
ASPGD|ASPL0000068168 - symbol:AN10944 species:162425 "Eme... 94 1.6e-05 2
>TAIR|locus:2024336 [details] [associations]
symbol:CDC5 "cell division cycle 5" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009507 "chloroplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009870 "defense response
signaling pathway, resistance gene-dependent" evidence=IMP]
[GO:0010204 "defense response signaling pathway, resistance
gene-independent" evidence=IMP] [GO:0042742 "defense response to
bacterium" evidence=IMP] [GO:0050832 "defense response to fungus"
evidence=IMP] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 SMART:SM00717 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0008380 GO:GO:0050832
GO:GO:0003677 GO:GO:0042742 GO:GO:0006397 GO:GO:0045087
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0005681
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007049 GO:GO:0009870
InterPro:IPR017930 PROSITE:PS51294 eggNOG:COG5147 GO:GO:0010204
EMBL:D58424 EMBL:AY519553 EMBL:AC000132 EMBL:AY093057 EMBL:BT008801
EMBL:AK316890 IPI:IPI00542991 PIR:F86231 RefSeq:NP_172448.1
UniGene:At.278 HSSP:P06876 ProteinModelPortal:P92948 SMR:P92948
IntAct:P92948 STRING:P92948 PaxDb:P92948 PRIDE:P92948
EnsemblPlants:AT1G09770.1 GeneID:837506 KEGG:ath:AT1G09770
GeneFarm:1651 TAIR:At1g09770 HOGENOM:HOG000182446 InParanoid:O04498
KO:K12860 OMA:RIEYWLE PhylomeDB:P92948 ProtClustDB:CLSN2679501
Genevestigator:P92948 InterPro:IPR021786 Pfam:PF11831
Uniprot:P92948
Length = 844
Score = 660 (237.4 bits), Expect = 1.1e-84, Sum P(3) = 1.1e-84
Identities = 134/230 (58%), Positives = 158/230 (68%)
Query: 1 MLTPSATPGGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKLEQRRQ 60
MLTPS TPGG G TPRIG+TPSRDGSSF +TPKGTP RDELHINED+DMH+SAKLE++R+
Sbjct: 411 MLTPSMTPGGAGLTPRIGLTPSRDGSSFSMTPKGTPFRDELHINEDMDMHESAKLERQRR 470
Query: 61 AELRRNLRLGLTSLPQPTNEYQIVVQXXXXXXXXXXXXXXXDMSDXXXXXXXXXXXXXXX 120
E RR+LR GLT LPQP NEYQIV Q DMSD
Sbjct: 471 EEARRSLRSGLTGLPQPKNEYQIVAQPPPEESEEPEEKIEEDMSDRIAREKAEEEARQQA 530
Query: 121 XXXKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPPTSIEQADEIIRXXXXXXXX 180
KRSKVLQR+LPRPP ASL +IRNSLL ADGDKSS VPPT IE AD+++R
Sbjct: 531 LLKKRSKVLQRDLPRPPAASLAVIRNSLLSADGDKSSVVPPTPIEVADKMVREELLQLLE 590
Query: 181 HDNAKYPLDEKVAKKKKGNKRSANGPTAPIPVIEDFEEDELQESFTLLSD 230
HDNAKYPLD+K A+KKKG K N + + I+DF+E+ELQE+ ++ +
Sbjct: 591 HDNAKYPLDDK-AEKKKGAKNRTNRSASQVLAIDDFDENELQEADKMIKE 639
Score = 183 (69.5 bits), Expect = 1.1e-84, Sum P(3) = 1.1e-84
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 236 QKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTL 295
++RAE + QI +T+KQ E GTE+ECF AL++QE++AAS R L E+V KQKE E L
Sbjct: 726 ERRAETVWTQIEATLKQAEIGGTEVECFKALKRQEEMAASFRKKNLQEEVIKQKETESKL 785
Query: 296 QQRYGDLSTELERISRLI 313
Q RYG++ +E+ ++
Sbjct: 786 QTRYGNMLAMVEKAEEIM 803
Score = 48 (22.0 bits), Expect = 6.3e-11, Sum P(3) = 6.3e-11
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 14 TPRIGMTPSRDGSSFGVTPK-G-TPIRD 39
TP +TPS G+TP+ G TP RD
Sbjct: 407 TPNPMLTPSMTPGGAGLTPRIGLTPSRD 434
Score = 43 (20.2 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 14 TPRIGMTPSRDGSSFGVTPKGTP 36
TPR GMTP R TP+ TP
Sbjct: 343 TPRQGMTPMR-------TPQRTP 358
Score = 37 (18.1 bits), Expect = 1.1e-84, Sum P(3) = 1.1e-84
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 1 MLTPSATPGGMG 12
M TP TP G G
Sbjct: 351 MRTPQRTPAGKG 362
>ZFIN|ZDB-GENE-040426-821 [details] [associations]
symbol:cdc5l "CDC5 cell division cycle 5-like (S.
pombe)" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 SMART:SM00717 ZFIN:ZDB-GENE-040426-821
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 PROSITE:PS51294 InterPro:IPR021786 Pfam:PF11831
GeneTree:ENSGT00550000074922 EMBL:BX927095 EMBL:CU855888
IPI:IPI00960731 Ensembl:ENSDART00000121806 Uniprot:E7EXD6
Length = 801
Score = 230 (86.0 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 89/323 (27%), Positives = 143/323 (44%)
Query: 3 TPSATPG--GMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINED---LDMHDSAKLEQ 57
TP TP G G TP G+TP +S GVTP TP+RD+L+IN + +D D + +
Sbjct: 411 TPFRTPSHTGEGLTPHGGLTPK---ASVGVTPGRTPLRDKLNINTEEGGVDYTDPS-FSK 466
Query: 58 RRQAELRRNLRLGLTSLPQPTNEYQIVVQXXXXXXXXXXXXXXX---DMSDXXXXXXXXX 114
Q E R +LRLGL SLP P N+++IV+ D ++
Sbjct: 467 HMQRESREHLRLGLMSLPVPKNDFEIVLPENAEKELEETEVDESFVEDAAEIELRKQAVR 526
Query: 115 XXXXXXXXXKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPPTSIEQADEIIRXX 174
+R +QR+LPRP E++ ++LR + P T ++QA+E+I+
Sbjct: 527 DAEREKELRQRHTSVQRDLPRPS----EVVNETILRPHNVEP---PLTDLQQAEELIKRE 579
Query: 175 XXXXXXHDNAKYPLDEKVAKKKKGNKRSANGPTAPIPVIED--FE---EDELQESFTLLS 229
+D +P + AKK KG S+N I +E +E E+EL+++ LL
Sbjct: 580 MITMIHYDCLHHPFSD--AKKTKGVNSSSNN-AEHISYLEKTPYEKVSEEELKKAGDLLL 636
Query: 230 DSRLNVQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQK 289
+ V K D Q+ EC+ + + +R N L +
Sbjct: 637 QE-MEVVKHGMGHGDLSMEAYNQVWE-----ECYSQVLYLPGQSRYTRAN-LASKKDRID 689
Query: 290 ELERTLQQRYGDLSTELERISRL 312
LE+ L+ G ++ E +R +++
Sbjct: 690 SLEKKLEMNRGHMTAEAKRAAKM 712
Score = 147 (56.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 34/78 (43%), Positives = 45/78 (57%)
Query: 236 QKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTL 295
Q RA L Q+ Q+E A EL F+ L+KQE LA R L EDVQ+Q+E E+ L
Sbjct: 724 QSRAMGLLKQLSEVWDQLEQANLELHTFMELKKQEDLAIPRRQEALREDVQRQQEREKEL 783
Query: 296 QQRYGDLSTELERISRLI 313
QQR+ DL + + +S I
Sbjct: 784 QQRFADLMLDKQTLSSKI 801
Score = 47 (21.6 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 20/56 (35%), Positives = 23/56 (41%)
Query: 2 LTPSATP--GGMGSTPR-----IGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMH 50
LT TP GG+ +TP G+TP R T TP R H E L H
Sbjct: 372 LTNVDTPLKGGL-NTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSHTGEGLTPH 426
>UNIPROTKB|E1BWQ5 [details] [associations]
symbol:CDC5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 SMART:SM00717 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 InterPro:IPR021786 Pfam:PF11831
GeneTree:ENSGT00550000074922 EMBL:AADN02018245 EMBL:AADN02018246
IPI:IPI00579547 Ensembl:ENSGALT00000026957 ArrayExpress:E1BWQ5
Uniprot:E1BWQ5
Length = 806
Score = 195 (73.7 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 81/323 (25%), Positives = 137/323 (42%)
Query: 3 TPSATP--GGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKLEQRRQ 60
TP TP G G TPR G+TP G TP TP+RD+L+IN + M D + +Q
Sbjct: 412 TPFRTPSQGQEGLTPRGGLTPKPVA---GTTPGRTPLRDKLNINPEEGMADYSDPSYAKQ 468
Query: 61 AEL--RRNLRLGLTSLPQPTNEYQIVVQXXXXXXXXX---XXXXXXDMSDXXXXXXXXXX 115
E R +LRLGL +LP P N+++IV+ D +D
Sbjct: 469 MERESREHLRLGLMALPAPKNDFEIVLPENAEKELEEPEVDEAFVEDTADIEARKQALRD 528
Query: 116 XXXXXXXXKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPP-TSIEQADEIIRXX 174
+ K +Q+ LPRP + ++LR + PP T +++++E+I+
Sbjct: 529 AERAKELKRMHKAVQKNLPRPSE-----VNETVLRP----VNVEPPLTDLQRSEELIKKE 579
Query: 175 XXXXXXHDNAKYPLDEK-VAKKKKGNKRSANGPTAPIPV----IEDFEEDELQESFTLLS 229
D +P E+ KK KG N + E F +++L+++ LL+
Sbjct: 580 MITMLHFDLLHHPFGEQPTGKKGKGPGFGTNNAEHMAYLEQNPYEKFSKEDLKKAQDLLA 639
Query: 230 DSRLNVQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQK 289
+ V K+ + Q+ EC+ + + +R N L + +
Sbjct: 640 QE-MEVVKQGMGHGELSSEAYNQVWE-----ECYSQVLYLPGQSRYTRAN-LASKKDRIE 692
Query: 290 ELERTLQQRYGDLSTELERISRL 312
LE+ L+ G ++TE +R +++
Sbjct: 693 SLEKRLEINRGHMTTEAKRAAKM 715
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 33/78 (42%), Positives = 44/78 (56%)
Query: 236 QKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTL 295
Q RA L Q++ Q+E A EL F L+K E A R+ L EDVQ+Q+E E+ L
Sbjct: 727 QSRAMGLIKQLNDLWDQIEQAHLELRTFEELKKHEDAAIPRRLECLKEDVQRQQEREKEL 786
Query: 296 QQRYGDLSTELERISRLI 313
QQR+ D T+ +S LI
Sbjct: 787 QQRFADFITKF--LSSLI 802
>UNIPROTKB|E1C6A9 [details] [associations]
symbol:CDC5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0000974 "Prp19 complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0071987 "WD40-repeat domain binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
GO:GO:0005730 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 GO:GO:0071013 InterPro:IPR021786 Pfam:PF11831
GeneTree:ENSGT00550000074922 OMA:HIAYLEH EMBL:AADN02018245
EMBL:AADN02018246 IPI:IPI00823375 Ensembl:ENSGALT00000036694
ArrayExpress:E1C6A9 Uniprot:E1C6A9
Length = 807
Score = 195 (73.7 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 81/323 (25%), Positives = 137/323 (42%)
Query: 3 TPSATP--GGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKLEQRRQ 60
TP TP G G TPR G+TP G TP TP+RD+L+IN + M D + +Q
Sbjct: 415 TPFRTPSQGQEGLTPRGGLTPKPVA---GTTPGRTPLRDKLNINPEEGMADYSDPSYAKQ 471
Query: 61 AEL--RRNLRLGLTSLPQPTNEYQIVVQXXXXXXXXX---XXXXXXDMSDXXXXXXXXXX 115
E R +LRLGL +LP P N+++IV+ D +D
Sbjct: 472 MERESREHLRLGLMALPAPKNDFEIVLPENAEKELEEPEVDEAFVEDTADIEARKQALRD 531
Query: 116 XXXXXXXXKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPP-TSIEQADEIIRXX 174
+ K +Q+ LPRP + ++LR + PP T +++++E+I+
Sbjct: 532 AERAKELKRMHKAVQKNLPRPSE-----VNETVLRP----VNVEPPLTDLQRSEELIKKE 582
Query: 175 XXXXXXHDNAKYPLDEK-VAKKKKGNKRSANGPTAPIPV----IEDFEEDELQESFTLLS 229
D +P E+ KK KG N + E F +++L+++ LL+
Sbjct: 583 MITMLHFDLLHHPFGEQPTGKKGKGPGFGTNNAEHMAYLEQNPYEKFSKEDLKKAQDLLA 642
Query: 230 DSRLNVQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQK 289
+ V K+ + Q+ EC+ + + +R N L + +
Sbjct: 643 QE-MEVVKQGMGHGELSSEAYNQVWE-----ECYSQVLYLPGQSRYTRAN-LASKKDRIE 695
Query: 290 ELERTLQQRYGDLSTELERISRL 312
LE+ L+ G ++TE +R +++
Sbjct: 696 SLEKRLEINRGHMTTEAKRAAKM 718
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 236 QKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTL 295
Q RA L Q++ Q+E A EL F L+K E A R+ L EDVQ+Q+E E+ L
Sbjct: 730 QSRAMGLIKQLNDLWDQIEQAHLELRTFEELKKHEDAAIPRRLECLKEDVQRQQEREKEL 789
Query: 296 QQRYGDLSTELE 307
QQR+ D + E
Sbjct: 790 QQRFADFMLDKE 801
>UNIPROTKB|E2RLP4 [details] [associations]
symbol:CDC5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071987 "WD40-repeat domain binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 GO:GO:0005730 GO:GO:0003677 GO:GO:0016607
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 GO:GO:0071013 KO:K12860 InterPro:IPR021786
Pfam:PF11831 CTD:988 GeneTree:ENSGT00550000074922 OMA:HIAYLEH
EMBL:AAEX03008362 RefSeq:XP_532156.3 Ensembl:ENSCAFT00000003163
GeneID:474921 KEGG:cfa:474921 NextBio:20850857 Uniprot:E2RLP4
Length = 802
Score = 192 (72.6 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 82/323 (25%), Positives = 140/323 (43%)
Query: 3 TPSATP--GGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHIN-ED--LDMHDSAKLEQ 57
TP TP G G TPR G TP +S TP TP+RD+L+IN ED D D + ++Q
Sbjct: 411 TPFRTPSHGSEGLTPRSGTTPKPVINS---TPGRTPLRDKLNINPEDGMADYSDPSYVKQ 467
Query: 58 RRQAELRRNLRLGLTSLPQPTNEYQIVVQXXXXXXXXXXXXXXX---DMSDXXXXXXXXX 114
+ E R +LRLGL LP P N+++IV+ D +D
Sbjct: 468 MER-ESREHLRLGLLGLPAPKNDFEIVLPENAEKELEDREIDDTYIEDAADVDARKQAIR 526
Query: 115 XXXXXXXXXKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPP-TSIEQADEIIRX 173
+ K +Q++LPRP + ++R L + PP T +++++E+I+
Sbjct: 527 EAERVKEMKRMHKAVQKDLPRPSEVNETILRP--LNVE-------PPLTDLQKSEELIKK 577
Query: 174 XXXXXXXHDNAKYPLDEKVAKKKK----GNKRSANGPTAPIPVIEDFEEDELQESFTLLS 229
+D +P + KK K G S + E F ++EL+++ +L
Sbjct: 578 EMITMLHYDLLHHPYEPSGNKKGKTVGFGTNNSEHIAYLEHNPYEKFSKEELKKAQDVLV 637
Query: 230 DSRLNVQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQK 289
+ V K+ + + Q+ EC+ + + +R N L + +
Sbjct: 638 QE-MEVVKQGMSHGELSSEAYNQVWE-----ECYSQVLYLPGQSRYTRAN-LASKKDRIE 690
Query: 290 ELERTLQQRYGDLSTELERISRL 312
LE+ L+ G ++TE +R +++
Sbjct: 691 SLEKRLEINRGHMTTEAKRAAKM 713
Score = 130 (50.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 32/74 (43%), Positives = 41/74 (55%)
Query: 236 QKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTL 295
Q RA L Q++ Q+E A EL F L+K E A R+ L EDVQ+Q+E E+ L
Sbjct: 725 QSRAMGLMKQLNDLWDQIEQAYLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKEL 784
Query: 296 QQRYGDLSTELERI 309
Q RY DL E E +
Sbjct: 785 QHRYADLLLEKETL 798
Score = 40 (19.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 19/53 (35%), Positives = 23/53 (43%)
Query: 2 LTPSATP--GGMGSTPR-----IGMTPSRDGSSFGVTPKGTPIRDELHINEDL 47
LT TP GG+ +TP G+TP R T TP R H +E L
Sbjct: 372 LTNVDTPLKGGL-NTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSHGSEGL 423
>UNIPROTKB|Q99459 [details] [associations]
symbol:CDC5L "Cell division cycle 5-like protein"
species:9606 "Homo sapiens" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0071987
"WD40-repeat domain binding" evidence=IDA] [GO:0016607 "nuclear
speck" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 GO:GO:0005737
GO:GO:0005730 GO:GO:0006355 GO:GO:0003677 GO:GO:0016607
GO:GO:0006351 GO:GO:0003682 GO:GO:0003723 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0007049 InterPro:IPR017930 PROSITE:PS51294
GO:GO:0000398 GO:GO:0071013 eggNOG:COG5147 HOGENOM:HOG000182446
KO:K12860 InterPro:IPR021786 Pfam:PF11831 CTD:988
HOVERGEN:HBG052766 OMA:HIAYLEH OrthoDB:EOG48GW2S GO:GO:0000974
GO:GO:0071987 EMBL:U86753 EMBL:AB007892 EMBL:AY518540 EMBL:AL133262
EMBL:AL353588 EMBL:BC001568 EMBL:D85423 IPI:IPI00465294
RefSeq:NP_001244.1 UniGene:Hs.485471 PDB:2DIM PDB:2DIN PDBsum:2DIM
PDBsum:2DIN ProteinModelPortal:Q99459 SMR:Q99459 DIP:DIP-31731N
IntAct:Q99459 MINT:MINT-133723 STRING:Q99459 PhosphoSite:Q99459
DMDM:73619933 PaxDb:Q99459 PeptideAtlas:Q99459 PRIDE:Q99459
DNASU:988 Ensembl:ENST00000371477 GeneID:988 KEGG:hsa:988
UCSC:uc003oxl.3 GeneCards:GC06P044402 HGNC:HGNC:1743 HPA:CAB012275
HPA:HPA006302 HPA:HPA011361 MIM:602868 neXtProt:NX_Q99459
PharmGKB:PA26270 InParanoid:Q99459 PhylomeDB:Q99459 ChiTaRS:CDC5L
EvolutionaryTrace:Q99459 GenomeRNAi:988 NextBio:4146
PMAP-CutDB:Q99459 Bgee:Q99459 CleanEx:HS_CDC5L
Genevestigator:Q99459 GermOnline:ENSG00000096401 Uniprot:Q99459
Length = 802
Score = 192 (72.6 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 82/323 (25%), Positives = 140/323 (43%)
Query: 3 TPSATP--GGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHIN-ED--LDMHDSAKLEQ 57
TP TP G G TPR G TP +S TP TP+RD+L+IN ED D D + ++Q
Sbjct: 411 TPFRTPSNGAEGLTPRSGTTPKPVINS---TPGRTPLRDKLNINPEDGMADYSDPSYVKQ 467
Query: 58 RRQAELRRNLRLGLTSLPQPTNEYQIVVQXXXXXXXXXXXXXXX---DMSDXXXXXXXXX 114
+ E R +LRLGL LP P N+++IV+ D +D
Sbjct: 468 MER-ESREHLRLGLLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIR 526
Query: 115 XXXXXXXXXKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPP-TSIEQADEIIRX 173
+ K +Q++LPRP + ++R L + PP T +++++E+I+
Sbjct: 527 DAERVKEMKRMHKAVQKDLPRPSEVNETILRP--LNVE-------PPLTDLQKSEELIKK 577
Query: 174 XXXXXXXHDNAKYPLDEKVAKKKK----GNKRSANGPTAPIPVIEDFEEDELQESFTLLS 229
+D +P + KK K G S + E F ++EL+++ +L
Sbjct: 578 EMITMLHYDLLHHPYEPSGNKKGKTVGFGTNNSEHITYLEHNPYEKFSKEELKKAQDVLV 637
Query: 230 DSRLNVQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQK 289
+ V K+ + + Q+ EC+ + + +R N L + +
Sbjct: 638 QE-MEVVKQGMSHGELSSEAYNQVWE-----ECYSQVLYLPGQSRYTRAN-LASKKDRIE 690
Query: 290 ELERTLQQRYGDLSTELERISRL 312
LE+ L+ G ++TE +R +++
Sbjct: 691 SLEKRLEINRGHMTTEAKRAAKM 713
Score = 131 (51.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 32/74 (43%), Positives = 41/74 (55%)
Query: 236 QKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTL 295
Q RA L Q++ Q+E A EL F L+K E A R+ L EDVQ+Q+E E+ L
Sbjct: 725 QSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKEL 784
Query: 296 QQRYGDLSTELERI 309
Q RY DL E E +
Sbjct: 785 QHRYADLLLEKETL 798
>MGI|MGI:1918952 [details] [associations]
symbol:Cdc5l "cell division cycle 5-like (S. pombe)"
species:10090 "Mus musculus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008380
"RNA splicing" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0071987 "WD40-repeat domain binding"
evidence=ISO] InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
MGI:MGI:1918952 GO:GO:0005737 GO:GO:0005730 GO:GO:0006355
GO:GO:0003677 GO:GO:0016607 GO:GO:0006351 GO:GO:0003682
GO:GO:0003723 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007049
InterPro:IPR017930 PROSITE:PS51294 GO:GO:0000398 GO:GO:0071013
eggNOG:COG5147 HOGENOM:HOG000182446 KO:K12860 InterPro:IPR021786
Pfam:PF11831 CTD:988 GeneTree:ENSGT00550000074922
HOVERGEN:HBG052766 OMA:HIAYLEH OrthoDB:EOG48GW2S GO:GO:0000974
GO:GO:0071987 EMBL:AK172950 EMBL:BC031480 IPI:IPI00284444
RefSeq:NP_690023.1 UniGene:Mm.28270 ProteinModelPortal:Q6A068
SMR:Q6A068 IntAct:Q6A068 STRING:Q6A068 PhosphoSite:Q6A068
PaxDb:Q6A068 PRIDE:Q6A068 Ensembl:ENSMUST00000024727 GeneID:71702
KEGG:mmu:71702 InParanoid:Q6A068 NextBio:334267 Bgee:Q6A068
CleanEx:MM_CDC5L Genevestigator:Q6A068
GermOnline:ENSMUSG00000023932 Uniprot:Q6A068
Length = 802
Score = 191 (72.3 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 79/319 (24%), Positives = 135/319 (42%)
Query: 3 TPSATP--GGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHIN-ED--LDMHDSAKLEQ 57
TP TP G G TPR G TP ++ TP TP+RD+L+IN ED D D + ++Q
Sbjct: 411 TPFRTPSNGAEGLTPRSGTTPKPVTNA---TPGRTPLRDKLNINPEDGMADYSDPSYVKQ 467
Query: 58 RRQAELRRNLRLGLTSLPQPTNEYQIVVQXXXXXXXXXXXXXXX---DMSDXXXXXXXXX 114
+ E R +LRLGL LP P N+++IV+ D +D
Sbjct: 468 MER-ESREHLRLGLLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIR 526
Query: 115 XXXXXXXXXKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPP-TSIEQADEIIRX 173
+ K +Q++LPRP + ++R L + PP T +++++E+I+
Sbjct: 527 DAERVKEMKRMHKAVQKDLPRPSEVNETILRP--LNVE-------PPLTDLQKSEELIKK 577
Query: 174 XXXXXXXHDNAKYPLDEKVAKKKKGNKRSANGPTAPIPVIEDFEEDELQESFTLLSDSRL 233
+D +P + KK K N A + I +E ++ + + L
Sbjct: 578 EMITMLHYDLLHHPYEPSGNKKGK-NVGFATNNSEHITYLEHSPYEKFSKEDLKKAQDAL 636
Query: 234 NVQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELER 293
VQ+ + H + EC+ + + +R N L + + LE+
Sbjct: 637 -VQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPAQSRYTRAN-LASKKDRIESLEK 694
Query: 294 TLQQRYGDLSTELERISRL 312
L+ G ++TE +R +++
Sbjct: 695 RLEINRGHMTTEAKRAAKM 713
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 33/74 (44%), Positives = 42/74 (56%)
Query: 236 QKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTL 295
Q RA L Q++ Q+E A EL F L+K E A R+ L EDVQ+Q+E E+ L
Sbjct: 725 QSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKEL 784
Query: 296 QQRYGDLSTELERI 309
QQRY DL E E +
Sbjct: 785 QQRYADLLMEKETL 798
>RGD|70892 [details] [associations]
symbol:Cdc5l "cell division cycle 5-like" species:10116 "Rattus
norvegicus" [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IDA] [GO:0000974 "Prp19 complex" evidence=ISO;ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=TAS] [GO:0008380 "RNA
splicing" evidence=IDA] [GO:0016607 "nuclear speck"
evidence=ISO;IDA] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0071987 "WD40-repeat domain binding"
evidence=ISO;ISS] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 RGD:70892 GO:GO:0005737 GO:GO:0000086 GO:GO:0005730
GO:GO:0006355 GO:GO:0003677 GO:GO:0016607 GO:GO:0006351
GO:GO:0003682 GO:GO:0003723 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 PROSITE:PS51294 GO:GO:0000398 GO:GO:0071013
eggNOG:COG5147 HOGENOM:HOG000182446 KO:K12860 InterPro:IPR021786
Pfam:PF11831 CTD:988 GeneTree:ENSGT00550000074922 HOVERGEN:HBG052766
OrthoDB:EOG48GW2S GO:GO:0000974 GO:GO:0071987 EMBL:AF000578
IPI:IPI00196507 RefSeq:NP_445979.1 UniGene:Rn.54977
ProteinModelPortal:O08837 SMR:O08837 STRING:O08837 PRIDE:O08837
Ensembl:ENSRNOT00000027264 GeneID:85434 KEGG:rno:85434
UCSC:RGD:70892 InParanoid:O08837 NextBio:617546 ArrayExpress:O08837
Genevestigator:O08837 GermOnline:ENSRNOG00000019975 Uniprot:O08837
Length = 802
Score = 190 (71.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 79/319 (24%), Positives = 135/319 (42%)
Query: 3 TPSATP--GGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHIN-ED--LDMHDSAKLEQ 57
TP TP G G TPR G TP ++ TP TP+RD+L+IN ED D D + ++Q
Sbjct: 411 TPFRTPSNGAEGLTPRSGTTPKPVTNA---TPGRTPLRDKLNINPEDGMADYSDPSYVKQ 467
Query: 58 RRQAELRRNLRLGLTSLPQPTNEYQIVVQXXXXXXXXXXXXXXX---DMSDXXXXXXXXX 114
+ E R +LRLGL LP P N+++IV+ D +D
Sbjct: 468 MER-ESREHLRLGLLGLPAPKNDFEIVLPENAEKELEEREMDDTYIEDAADVDARKQAIR 526
Query: 115 XXXXXXXXXKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPP-TSIEQADEIIRX 173
+ K +Q++LPRP + ++R L + PP T +++++E+I+
Sbjct: 527 DAERVKEMKRMHKAVQKDLPRPSEVNETILRP--LNVE-------PPLTDLQKSEELIKK 577
Query: 174 XXXXXXXHDNAKYPLDEKVAKKKKGNKRSANGPTAPIPVIEDFEEDELQESFTLLSDSRL 233
+D +P + KK K N A + I +E ++ + L +
Sbjct: 578 EMITMLHYDLLHHPYEPSGNKKGK-NVGFATNNSEHITYLEHSPYEKFSKE-DLKKAQDV 635
Query: 234 NVQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELER 293
VQ+ + H + EC+ + + +R N L + + LE+
Sbjct: 636 LVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPAQSRYTRAN-LASKKDRIESLEK 694
Query: 294 TLQQRYGDLSTELERISRL 312
L+ G ++TE +R +++
Sbjct: 695 RLEINRGHMTTEAKRAAKM 713
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/74 (44%), Positives = 42/74 (56%)
Query: 236 QKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTL 295
Q RA L Q++ Q+E A EL F L+K E A R+ L EDVQ+Q+E E+ L
Sbjct: 725 QSRAMGLLKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKEL 784
Query: 296 QQRYGDLSTELERI 309
QQRY DL E E +
Sbjct: 785 QQRYADLLMEKETL 798
>UNIPROTKB|Q2KJC1 [details] [associations]
symbol:CDC5L "Cell division cycle 5-like protein"
species:9913 "Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0071987 "WD40-repeat domain binding" evidence=ISS] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 SMART:SM00717 GO:GO:0005737 GO:GO:0005730
GO:GO:0006355 GO:GO:0003677 GO:GO:0016607 GO:GO:0006351
GO:GO:0003682 GO:GO:0003723 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0007049 InterPro:IPR017930 PROSITE:PS51294 GO:GO:0000398
GO:GO:0071013 eggNOG:COG5147 HOGENOM:HOG000182446 KO:K12860
InterPro:IPR021786 Pfam:PF11831 EMBL:BC105417 IPI:IPI00691266
RefSeq:NP_001070010.1 UniGene:Bt.59498 ProteinModelPortal:Q2KJC1
SMR:Q2KJC1 STRING:Q2KJC1 PRIDE:Q2KJC1 Ensembl:ENSBTAT00000026654
GeneID:767817 KEGG:bta:767817 CTD:988 GeneTree:ENSGT00550000074922
HOVERGEN:HBG052766 InParanoid:Q2KJC1 OMA:HIAYLEH OrthoDB:EOG48GW2S
NextBio:20918190 ArrayExpress:Q2KJC1 GO:GO:0000974 GO:GO:0071987
Uniprot:Q2KJC1
Length = 802
Score = 189 (71.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 81/323 (25%), Positives = 140/323 (43%)
Query: 3 TPSATP--GGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHIN-ED--LDMHDSAKLEQ 57
TP TP G G TPR G TP +S TP TP+RD+L+IN ED D D + ++Q
Sbjct: 411 TPFRTPSHGSEGLTPRSGTTPKPVINS---TPGRTPLRDKLNINPEDGMADYSDPSYVKQ 467
Query: 58 RRQAELRRNLRLGLTSLPQPTNEYQIVVQXXXXXXXXXXXXXXX---DMSDXXXXXXXXX 114
+ E R +LRLGL LP P N+++IV+ D +D
Sbjct: 468 MER-ESREHLRLGLLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIR 526
Query: 115 XXXXXXXXXKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPP-TSIEQADEIIRX 173
+ K +Q++LPRP + ++R L + PP T +++++E+I+
Sbjct: 527 DAERVKEMKRMHKAVQKDLPRPSEVNETILRP--LNVE-------PPLTDLQKSEELIKK 577
Query: 174 XXXXXXXHDNAKYPLDEKVAKKKK----GNKRSANGPTAPIPVIEDFEEDELQESFTLLS 229
+D +P + KK K G + + E F ++EL+++ +L
Sbjct: 578 EMITMLHYDLLHHPYEPSGNKKGKTVGFGTNNAEHIAYLEHNPYEKFSKEELKKAQDVLV 637
Query: 230 DSRLNVQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQK 289
+ V K+ + + Q+ EC+ + + +R N L + +
Sbjct: 638 QE-MEVVKQGMSHGELSSEAYNQVWE-----ECYSQVLYLPGQSRYTRAN-LASKKDRIE 690
Query: 290 ELERTLQQRYGDLSTELERISRL 312
LE+ L+ G ++TE +R +++
Sbjct: 691 SLEKRLEINRGHMTTEAKRAAKM 713
Score = 130 (50.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 32/74 (43%), Positives = 41/74 (55%)
Query: 236 QKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTL 295
Q RA L Q++ Q+E A EL F L+K E A R+ L EDVQ+Q+E E+ L
Sbjct: 725 QSRAMGLMKQLNDLWDQIEQAYLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKEL 784
Query: 296 QQRYGDLSTELERI 309
Q RY DL E E +
Sbjct: 785 QHRYADLLLEKETL 798
Score = 40 (19.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 19/53 (35%), Positives = 23/53 (43%)
Query: 2 LTPSATP--GGMGSTPR-----IGMTPSRDGSSFGVTPKGTPIRDELHINEDL 47
LT TP GG+ +TP G+TP R T TP R H +E L
Sbjct: 372 LTNVDTPLKGGL-NTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSHGSEGL 423
>UNIPROTKB|F1RQS5 [details] [associations]
symbol:CDC5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071987 "WD40-repeat domain binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
GO:GO:0005730 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 GO:GO:0071013 InterPro:IPR021786 Pfam:PF11831
GeneTree:ENSGT00550000074922 OMA:HIAYLEH EMBL:CR956370
Ensembl:ENSSSCT00000001908 Uniprot:F1RQS5
Length = 803
Score = 189 (71.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 81/323 (25%), Positives = 140/323 (43%)
Query: 3 TPSATP--GGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHIN-ED--LDMHDSAKLEQ 57
TP TP G G TPR G TP +S TP TP+RD+L+IN ED D D + ++Q
Sbjct: 412 TPFRTPSHGSEGLTPRSGTTPKPVINS---TPGRTPLRDKLNINPEDGMADYSDPSYVKQ 468
Query: 58 RRQAELRRNLRLGLTSLPQPTNEYQIVVQXXXXXXXXXXXXXXX---DMSDXXXXXXXXX 114
+ E R +LRLGL LP P N+++IV+ D +D
Sbjct: 469 MER-ESREHLRLGLLGLPAPKNDFEIVLPENAEKELEDREVDDTYIEDAADVDARKQAIR 527
Query: 115 XXXXXXXXXKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPP-TSIEQADEIIRX 173
+ K +Q++LPRP + ++R L + PP T +++++E+I+
Sbjct: 528 EAERVKEMKRMHKAVQKDLPRPSEVNETILRP--LNVE-------PPLTDLQKSEELIKK 578
Query: 174 XXXXXXXHDNAKYPLDEKVAKKKK----GNKRSANGPTAPIPVIEDFEEDELQESFTLLS 229
+D +P + KK K G + + E F ++EL+++ +L
Sbjct: 579 EMITMLHYDLLHHPYEPSGNKKGKPVGFGTNNAEHIAYLEHNPYEKFSKEELKKAQDVLV 638
Query: 230 DSRLNVQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQK 289
+ V K+ + + Q+ EC+ + + +R N L + +
Sbjct: 639 QE-MEVVKQGMSHGELSSEAYNQVWE-----ECYSQVLYLPGQSRYTRAN-LASKKDRIE 691
Query: 290 ELERTLQQRYGDLSTELERISRL 312
LE+ L+ G ++TE +R +++
Sbjct: 692 SLEKRLEINRGHMTTEAKRAAKM 714
Score = 130 (50.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 32/74 (43%), Positives = 41/74 (55%)
Query: 236 QKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTL 295
Q RA L Q++ Q+E A EL F L+K E A R+ L EDVQ+Q+E E+ L
Sbjct: 726 QSRAMGLMKQLNDLWDQIEQAYLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKEL 785
Query: 296 QQRYGDLSTELERI 309
Q RY DL E E +
Sbjct: 786 QHRYADLLLEKETL 799
Score = 40 (19.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 19/53 (35%), Positives = 23/53 (43%)
Query: 2 LTPSATP--GGMGSTPR-----IGMTPSRDGSSFGVTPKGTPIRDELHINEDL 47
LT TP GG+ +TP G+TP R T TP R H +E L
Sbjct: 373 LTNVDTPLKGGL-NTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSHGSEGL 424
>POMBASE|SPAC644.12 [details] [associations]
symbol:cdc5 "cell division control protein, splicing
factor Cdc5" species:4896 "Schizosaccharomyces pombe" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0010389 "regulation of G2/M transition of mitotic
cell cycle" evidence=NAS] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=IMP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 PomBase:SPAC644.12 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0003682
GO:GO:0005681 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007049
GO:GO:0010389 InterPro:IPR017930 PROSITE:PS51294 eggNOG:COG5147
GO:GO:0045292 HOGENOM:HOG000182446 KO:K12860 InterPro:IPR021786
Pfam:PF11831 OMA:DIVKMGM EMBL:L19525 PIR:S41712 RefSeq:NP_593880.1
ProteinModelPortal:P39964 SMR:P39964 DIP:DIP-34817N IntAct:P39964
STRING:P39964 EnsemblFungi:SPAC644.12.1 GeneID:2543583
KEGG:spo:SPAC644.12 OrthoDB:EOG48WGB3 NextBio:20804590
Uniprot:P39964
Length = 757
Score = 122 (48.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 44/153 (28%), Positives = 66/153 (43%)
Query: 8 PGGMGSTPRIGMTPSR--DGSSFGVTPKGTPIR---DELHINEDLDMHDSAKLEQRRQAE 62
PGG G T G+TPS +GS+ P+ TP R D IN + + +L R+ +
Sbjct: 408 PGGTGYT---GVTPSHAANGSALAA-PQATPFRTPRDTFSINAAAER--AGRLASERENK 461
Query: 63 LR-RNLRLGLTSLPQPTNEYQIVVQXXXXXXXXXXXXXXX--DMSDXXXXXXXXXXXXXX 119
+R + LR L LP+P N+Y+++ D +D
Sbjct: 462 IRLKALRELLAKLPKPKNDYELMEPRFADETDVEATVGVLEEDATDRERRIQERIAEKER 521
Query: 120 XXXXKRSKVLQRELPRPPVASLELIRNSLLRAD 152
+RS+V+QR+L RP V E + SL D
Sbjct: 522 LAKARRSQVIQRDLIRPSVTQPEKWKRSLENED 554
Score = 69 (29.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 251 KQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTLQQRY 299
K ++T L C+ L QE+LA +R+ ++ K +++E QQ Y
Sbjct: 702 KALQTERKNLTCYEFLYNQERLALPNRLEAAEIELSKMQQIEAYAQQDY 750
>ASPGD|ASPL0000068168 [details] [associations]
symbol:AN10944 species:162425 "Emericella nidulans"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0045292 "mRNA
cis splicing, via spliceosome" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 SMART:SM00717 GO:GO:0005737 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GO:GO:0003682 GO:GO:0005681
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007049 EMBL:AACD01000129
EMBL:BN001304 InterPro:IPR017930 PROSITE:PS51294 InterPro:IPR021786
Pfam:PF11831 ProteinModelPortal:C8VBH3 SMR:C8VBH3 STRING:Q5AW35
EnsemblFungi:CADANIAT00000590 OMA:DIVKMGM Uniprot:C8VBH3
Length = 791
Score = 94 (38.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 36/147 (24%), Positives = 61/147 (41%)
Query: 4 PSATPGGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINED----LDMHDSAKLEQRR 59
P ATP G+ + TP G+ G TP TP RD +N++ L + + + + R
Sbjct: 422 PMATPFRQGNA--VSATPVPGGAGPGATPLRTP-RDHFSLNKEISGGLPIGSTPREIKMR 478
Query: 60 QAELRRNLRLGLTSLPQPTN-EYQIVVQXXXXXXXXXXXXXXXDMSDXXXXXXXXXXXXX 118
+ R+++R L +LP+P E+++ + S
Sbjct: 479 ENLARQSIRGRLAALPKPKETEWELEQLPSESAEPAGATEYPEEDSAVRDAREKEIRKRA 538
Query: 119 XXXXXKR-SKVLQRELPRPPVASLELI 144
KR ++V QR LPRP V ++ +
Sbjct: 539 AEAEHKRQTQVYQRSLPRPVVLDIDAL 565
Score = 88 (36.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 236 QKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTL 295
Q RA+ LR +I +E + EL+ F LQ E+ A S R+ L E+V ER
Sbjct: 706 QNRAKMLRAKITEAHTALEKSKHELDAFRTLQISEEAAISRRLEKLREEVAFVMRREREA 765
Query: 296 QQRYGDLSTELE 307
Q++Y EL+
Sbjct: 766 QEQYRCRKDELD 777
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.309 0.128 0.352 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 502 402 0.00099 117 3 11 23 0.37 35
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 596 (63 KB)
Total size of DFA: 217 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.80u 0.26s 36.06t Elapsed: 00:00:02
Total cpu time: 35.80u 0.26s 36.06t Elapsed: 00:00:02
Start: Mon May 20 16:16:29 2013 End: Mon May 20 16:16:31 2013