BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044525
(502 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P92948|CDC5L_ARATH Cell division cycle 5-like protein OS=Arabidopsis thaliana GN=CDC5
PE=1 SV=2
Length = 844
Score = 301 bits (772), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 169/230 (73%), Positives = 197/230 (85%), Gaps = 1/230 (0%)
Query: 1 MLTPSATPGGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKLEQRRQ 60
MLTPS TPGG G TPRIG+TPSRDGSSF +TPKGTP RDELHINED+DMH+SAKLE++R+
Sbjct: 411 MLTPSMTPGGAGLTPRIGLTPSRDGSSFSMTPKGTPFRDELHINEDMDMHESAKLERQRR 470
Query: 61 AELRRNLRLGLTSLPQPTNEYQIVVQPPAEEDEEPEEKIEEDMSDRLAREKAEEEARQQA 120
E RR+LR GLT LPQP NEYQIV QPP EE EEPEEKIEEDMSDR+AREKAEEEARQQA
Sbjct: 471 EEARRSLRSGLTGLPQPKNEYQIVAQPPPEESEEPEEKIEEDMSDRIAREKAEEEARQQA 530
Query: 121 LLRKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPPTSIEQADEIIRKELLKLLE 180
LL+KRSKVLQR+LPRPP ASL +IRNSLL ADGDKSS VPPT IE AD+++R+ELL+LLE
Sbjct: 531 LLKKRSKVLQRDLPRPPAASLAVIRNSLLSADGDKSSVVPPTPIEVADKMVREELLQLLE 590
Query: 181 HDNAKYPLDEKVAKKKKGNKRSANGPTAPIPVIEDFEEDELQESFTLLSD 230
HDNAKYPLD+K A+KKKG K N + + I+DF+E+ELQE+ ++ +
Sbjct: 591 HDNAKYPLDDK-AEKKKGAKNRTNRSASQVLAIDDFDENELQEADKMIKE 639
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%)
Query: 236 QKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTL 295
++RAE + QI +T+KQ E GTE+ECF AL++QE++AAS R L E+V KQKE E L
Sbjct: 726 ERRAETVWTQIEATLKQAEIGGTEVECFKALKRQEEMAASFRKKNLQEEVIKQKETESKL 785
Query: 296 QQRYGDLSTELERISRLIAERREQAQKAAEE 326
Q RYG++ +E+ ++ R QA K E+
Sbjct: 786 QTRYGNMLAMVEKAEEIMVGFRAQALKKQED 816
>sp|A7SD85|CDC5L_NEMVE Cell division cycle 5-related protein OS=Nematostella vectensis
GN=cdc5l PE=3 SV=1
Length = 805
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 165/310 (53%), Gaps = 38/310 (12%)
Query: 3 TPSATPG-GMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHIN-EDLDM--HDSAKLEQR 58
TP TPG G GSTPR GMTP + G TP +RD+L+IN ED M ++S ++
Sbjct: 411 TPYRTPGEGSGSTPRQGMTPR---GAIG-TPSQRSVRDKLNINPEDAVMEEYESECAAKQ 466
Query: 59 RQAELRRNLRLGLTSLPQPTNEYQIVV-QPPAEEDEE--PEEKIEE--DMSDRLAREKAE 113
+Q+E + L GL SLP P+N+++IV+ + PAE EE P + +E+ D+ +R +A+
Sbjct: 467 QQSEAKEQLLAGLASLPAPSNDFEIVLPETPAEASEEHKPMDFVEDAADIDERALALRAK 526
Query: 114 EEARQQALLRKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPPTS-IEQADEIIR 172
+E ++ R+RS+ +QRELPRP + ++R ++ PP S ++ A+E+I+
Sbjct: 527 QEELER---RRRSQAVQRELPRPSNVNTSVLR---------PTNVEPPLSALQMAEELIK 574
Query: 173 KELLKLLEHDNAKYPLDEKVAKKKKGNKRSANGPTAPIP---------VIEDFEEDELQE 223
KE++ +L +D +P +++ + NK++ N A I +E+F ++EL
Sbjct: 575 KEMIVMLRNDIINHPTSQQI--ESLTNKKTRNAAQAVITGNRAALERDPMENFTDEELSS 632
Query: 224 SFTLLSDSRLNVQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWE 283
+ LL V+ + + + + K E ++ FL Q++ AA + E
Sbjct: 633 AKNLLRQEMDFVKSKMAHSDLPLEAYSKVWEECYAQV-LFLPSQQRYTRAAMASKKDRLE 691
Query: 284 DVQKQKELER 293
++K+ EL R
Sbjct: 692 SLEKRLELNR 701
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 235 VQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERT 294
Q RA L Q+ +Q+E + E+ F AL+ QE A R+ L EDVQ+Q E E+
Sbjct: 725 YQTRAVGLTKQLSDLHEQLEQSQVEMTTFQALRNQELQAIPKRLEALKEDVQRQTEREKQ 784
Query: 295 LQQRYGDLSTE 305
LQ +Y +L E
Sbjct: 785 LQAQYSELLYE 795
>sp|Q6A068|CDC5L_MOUSE Cell division cycle 5-like protein OS=Mus musculus GN=Cdc5l PE=1
SV=2
Length = 802
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 112/210 (53%), Gaps = 26/210 (12%)
Query: 3 TPSATP--GGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKLEQRRQ 60
TP TP G G TPR G TP TP TP+RD+L+IN + M D + +Q
Sbjct: 411 TPFRTPSNGAEGLTPRSGTTPK---PVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQ 467
Query: 61 AEL--RRNLRLGLTSLPQPTNEYQIVVQPPAE---EDEEPEEKIEEDMSDRLAREKAEEE 115
E R +LRLGL LP P N+++IV+ AE E+ E ++ ED +D AR++A +
Sbjct: 468 MERESREHLRLGLLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRD 527
Query: 116 ARQQALLRKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPP-TSIEQADEIIRKE 174
A + +++ K +Q++LPRP + ++R + PP T +++++E+I+KE
Sbjct: 528 AERVKEMKRMHKAVQKDLPRPSEVNETILR---------PLNVEPPLTDLQKSEELIKKE 578
Query: 175 LLKLLEHDNAKYPLDEKVAKKKKGNKRSAN 204
++ +L +D +P + GNK+ N
Sbjct: 579 MITMLHYDLLHHPYE------PSGNKKGKN 602
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 42/75 (56%)
Query: 235 VQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERT 294
Q RA L Q++ Q+E A EL F L+K E A R+ L EDVQ+Q+E E+
Sbjct: 724 YQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKE 783
Query: 295 LQQRYGDLSTELERI 309
LQQRY DL E E +
Sbjct: 784 LQQRYADLLMEKETL 798
>sp|O08837|CDC5L_RAT Cell division cycle 5-like protein OS=Rattus norvegicus GN=Cdc5l
PE=1 SV=2
Length = 802
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 112/210 (53%), Gaps = 26/210 (12%)
Query: 3 TPSATP--GGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKLEQRRQ 60
TP TP G G TPR G TP TP TP+RD+L+IN + M D + +Q
Sbjct: 411 TPFRTPSNGAEGLTPRSGTTPK---PVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQ 467
Query: 61 AEL--RRNLRLGLTSLPQPTNEYQIVVQPPAE---EDEEPEEKIEEDMSDRLAREKAEEE 115
E R +LRLGL LP P N+++IV+ AE E+ E ++ ED +D AR++A +
Sbjct: 468 MERESREHLRLGLLGLPAPKNDFEIVLPENAEKELEEREMDDTYIEDAADVDARKQAIRD 527
Query: 116 ARQQALLRKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPP-TSIEQADEIIRKE 174
A + +++ K +Q++LPRP + ++R + PP T +++++E+I+KE
Sbjct: 528 AERVKEMKRMHKAVQKDLPRPSEVNETILR---------PLNVEPPLTDLQKSEELIKKE 578
Query: 175 LLKLLEHDNAKYPLDEKVAKKKKGNKRSAN 204
++ +L +D +P + GNK+ N
Sbjct: 579 MITMLHYDLLHHPYE------PSGNKKGKN 602
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 42/75 (56%)
Query: 235 VQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERT 294
Q RA L Q++ Q+E A EL F L+K E A R+ L EDVQ+Q+E E+
Sbjct: 724 YQSRAMGLLKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKE 783
Query: 295 LQQRYGDLSTELERI 309
LQQRY DL E E +
Sbjct: 784 LQQRYADLLMEKETL 798
>sp|Q99459|CDC5L_HUMAN Cell division cycle 5-like protein OS=Homo sapiens GN=CDC5L PE=1
SV=2
Length = 802
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 20/203 (9%)
Query: 3 TPSATP--GGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKLEQRRQ 60
TP TP G G TPR G TP TP TP+RD+L+IN + M D + +Q
Sbjct: 411 TPFRTPSNGAEGLTPRSGTTPK---PVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQ 467
Query: 61 AEL--RRNLRLGLTSLPQPTNEYQIVVQPPAE---EDEEPEEKIEEDMSDRLAREKAEEE 115
E R +LRLGL LP P N+++IV+ AE E+ E ++ ED +D AR++A +
Sbjct: 468 MERESREHLRLGLLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRD 527
Query: 116 ARQQALLRKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPP-TSIEQADEIIRKE 174
A + +++ K +Q++LPRP + ++R + PP T +++++E+I+KE
Sbjct: 528 AERVKEMKRMHKAVQKDLPRPSEVNETILR---------PLNVEPPLTDLQKSEELIKKE 578
Query: 175 LLKLLEHDNAKYPLDEKVAKKKK 197
++ +L +D +P + KK K
Sbjct: 579 MITMLHYDLLHHPYEPSGNKKGK 601
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 41/75 (54%)
Query: 235 VQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERT 294
Q RA L Q++ Q+E A EL F L+K E A R+ L EDVQ+Q+E E+
Sbjct: 724 YQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKE 783
Query: 295 LQQRYGDLSTELERI 309
LQ RY DL E E +
Sbjct: 784 LQHRYADLLLEKETL 798
>sp|Q2KJC1|CDC5L_BOVIN Cell division cycle 5-like protein OS=Bos taurus GN=CDC5L PE=2 SV=1
Length = 802
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 20/203 (9%)
Query: 3 TPSATP--GGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKLEQRRQ 60
TP TP G G TPR G TP TP TP+RD+L+IN + M D + +Q
Sbjct: 411 TPFRTPSHGSEGLTPRSGTTPK---PVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQ 467
Query: 61 AEL--RRNLRLGLTSLPQPTNEYQIVVQPPAE---EDEEPEEKIEEDMSDRLAREKAEEE 115
E R +LRLGL LP P N+++IV+ AE E+ E ++ ED +D AR++A +
Sbjct: 468 MERESREHLRLGLLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRD 527
Query: 116 ARQQALLRKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPP-TSIEQADEIIRKE 174
A + +++ K +Q++LPRP + ++R + PP T +++++E+I+KE
Sbjct: 528 AERVKEMKRMHKAVQKDLPRPSEVNETILR---------PLNVEPPLTDLQKSEELIKKE 578
Query: 175 LLKLLEHDNAKYPLDEKVAKKKK 197
++ +L +D +P + KK K
Sbjct: 579 MITMLHYDLLHHPYEPSGNKKGK 601
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 41/75 (54%)
Query: 235 VQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERT 294
Q RA L Q++ Q+E A EL F L+K E A R+ L EDVQ+Q+E E+
Sbjct: 724 YQSRAMGLMKQLNDLWDQIEQAYLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKE 783
Query: 295 LQQRYGDLSTELERI 309
LQ RY DL E E +
Sbjct: 784 LQHRYADLLLEKETL 798
>sp|P0CO94|CEF1_CRYNJ Pre-mRNA-splicing factor CEF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CEF1 PE=3 SV=1
Length = 838
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 SATPGGMGSTPRIG-MTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKL-EQRRQAE 62
+ATP + ++ R G +T +R G TP TP RD+L+IN+D ++ + ++RR AE
Sbjct: 417 AATPNPLATSARGGVLTSTRTVPGVGTTPLRTPFRDDLNINDDASVYGETPMNDRRRLAE 476
Query: 63 LRRNLRLGLTSLPQPTNEYQIVVQPPAEEDEEPEEKIEE-DMSDRLAREKAEEEARQQAL 121
RR L+ G +LP+P N +++ EE+ E E + E D ++R AR KA E ++
Sbjct: 477 SRRALKAGFAALPKPENNFELAETEEDEEEAEEAEPLTEEDAAERDARLKAAREEEERRE 536
Query: 122 LRKRSKVLQRELPRPP-VASLELIRNSLLRADGDKSSFVPPTSIEQAD--EIIRKELLKL 178
L +RS V+++ LPRP V + +L+ D S+ V T E A +++ E+ L
Sbjct: 537 LERRSTVIKKGLPRPVNVNTYKLL-------DDLNSAIVEQTDEEMAAAFKLVNLEVAML 589
Query: 179 LEHDNAKYPL 188
++HD+ +PL
Sbjct: 590 MKHDSIAHPL 599
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 241 NLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTLQQRYG 300
++ ++IH T + MET FL L+ E+ AA +R+ + E+V K+ ER LQ RY
Sbjct: 740 DVMEEIHQTKRDMET-------FLMLKGIEEAAAPARLEKIREEVAVLKKRERDLQARYA 792
Query: 301 DLS 303
+L+
Sbjct: 793 ELN 795
>sp|P0CO95|CEF1_CRYNB Pre-mRNA-splicing factor CEF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=CEF1 PE=3 SV=1
Length = 833
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 SATPGGMGSTPRIG-MTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKL-EQRRQAE 62
+ATP + ++ R G +T +R G TP TP RD+L+IN+D ++ + ++RR AE
Sbjct: 412 AATPNPLATSARGGVLTSTRTVPGVGTTPLRTPFRDDLNINDDASVYGETPMNDRRRLAE 471
Query: 63 LRRNLRLGLTSLPQPTNEYQIVVQPPAEEDEEPEEKIEE-DMSDRLAREKAEEEARQQAL 121
RR L+ G +LP+P N +++ EE+ E E + E D ++R AR KA E ++
Sbjct: 472 SRRALKAGFAALPKPENNFELAETEEDEEEAEEAEPLTEEDAAERDARLKAAREEEERRE 531
Query: 122 LRKRSKVLQRELPRPP-VASLELIRNSLLRADGDKSSFVPPTSIEQAD--EIIRKELLKL 178
L +RS V+++ LPRP V + +L+ D S+ V T E A +++ E+ L
Sbjct: 532 LERRSTVIKKGLPRPVNVNTYKLL-------DDLNSAIVEQTDEEMAAAFKLVNLEVAML 584
Query: 179 LEHDNAKYPL 188
++HD+ +PL
Sbjct: 585 MKHDSIAHPL 594
Score = 36.2 bits (82), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 241 NLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTLQQRYG 300
++ ++IH T + MET FL L+ E+ AA +R+ + E+V ++ ER LQ RY
Sbjct: 735 DVMEEIHQTKRDMET-------FLMLKGIEEAAAPARLEKIREEVAVLEKRERDLQARYA 787
Query: 301 DLS 303
+L+
Sbjct: 788 ELN 790
>sp|P39964|CEF1_SCHPO Pre-mRNA-splicing factor cdc5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc5 PE=1 SV=1
Length = 757
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 31/191 (16%)
Query: 8 PGGMGSTPRIGMTPSR--DGSSFGVTPKGTPIR---DELHINEDLDMHDSAKLEQRRQAE 62
PGG G T G+TPS +GS+ P+ TP R D IN + + +L R+ +
Sbjct: 408 PGGTGYT---GVTPSHAANGSALAA-PQATPFRTPRDTFSINAAAER--AGRLASERENK 461
Query: 63 LR-RNLRLGLTSLPQPTNEYQIVVQPPAEEDEEPEEKI---EEDMSDRLAREKAEEEARQ 118
+R + LR L LP+P N+Y+++ +P ++ + E + EED +DR R E A +
Sbjct: 462 IRLKALRELLAKLPKPKNDYELM-EPRFADETDVEATVGVLEEDATDR-ERRIQERIAEK 519
Query: 119 QALLR-KRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPPTSIEQADEIIRKELLK 177
+ L + +RS+V+QR+L RP V E + SL D PT+ ++ KE++
Sbjct: 520 ERLAKARRSQVIQRDLIRPSVTQPEKWKRSLENED--------PTA-----NVLLKEMIA 566
Query: 178 LLEHDNAKYPL 188
L+ D YP
Sbjct: 567 LISSDAINYPF 577
>sp|Q4P652|CEF1_USTMA Pre-mRNA-splicing factor CEF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=CEF1 PE=3 SV=1
Length = 820
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 33/201 (16%)
Query: 4 PSATPGGMGSTPRIGMTPSRDGSSF----GVTPKGTPIRDELHINEDLDM---HDSAKLE 56
P TPG R G TP+ S TP+ TP+RD L +N D H++ +
Sbjct: 423 PLLTPG-----LRNGQTPASASDSRLHADTSTPQRTPLRDNLGLNVDDSFQAGHETPREL 477
Query: 57 QRRQAELRRNLRLGLTSLPQPTNEYQIVV---------QPPAEEDEEPEEKIEEDMSDRL 107
+R ++ + +LR L+SLP P N++ IVV + D EP EED ++R
Sbjct: 478 KRARSLAQSHLRQSLSSLPAPKNDFDIVVDEQDVELQANSSSRLDNEPAMS-EEDAAERD 536
Query: 108 AREKAEEEARQQALLRKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPPTSIEQA 167
AR + + +RS+V++R LPRP L + N + D+
Sbjct: 537 ARLARQAAEEEARSEARRSQVVRRNLPRPAQVDLSRLHNQIDSRYRDRVEL--------- 587
Query: 168 DEIIRKELLKLLEHDNAKYPL 188
++ +E +LL HD +P+
Sbjct: 588 --LVARETAQLLHHDANVHPI 606
>sp|C8VBH3|CEF1_EMENI Pre-mRNA-splicing factor cef1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cef1
PE=3 SV=1
Length = 791
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 152/352 (43%), Gaps = 60/352 (17%)
Query: 4 PSATPGGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINED----LDMHDSAKLEQRR 59
P ATP G+ + TP G+ G TP TP RD +N++ L + + + + R
Sbjct: 422 PMATPFRQGNA--VSATPVPGGAGPGATPLRTP-RDHFSLNKEISGGLPIGSTPREIKMR 478
Query: 60 QAELRRNLRLGLTSLPQPTNEYQIVVQPPAEEDEEP--EEKIEEDMSDRLAREKAEEEAR 117
+ R+++R L +LP+P + Q P+E E E EED + R AREK +
Sbjct: 479 ENLARQSIRGRLAALPKPKETEWELEQLPSESAEPAGATEYPEEDSAVRDAREKEIRKRA 538
Query: 118 QQALLRKRSKVLQRELPRP-----------------PVASLELIRNSLLRADGDKSSFVP 160
+A +++++V QR LPRP P+ L +LL A+ D F
Sbjct: 539 AEAEHKRQTQVYQRSLPRPVVLDIDALMERASRVMDPITGLIAKEAALLVAN-DACKFAT 597
Query: 161 PTS-IEQADEIIRKELLKLLEHDNAKYPLDEKVAK-KKKGNKRSANGPTA---PIPVIED 215
P + IE + + K LE A + K ++ N+ A ++ +P + +
Sbjct: 598 PGAKIEGKPRKLERLDDKYLEEARAAIASEASSGKLEEWSNEFDAKWSSSRQDTLPGLSN 657
Query: 216 FEEDELQESF---------------TLLS--------DSRL-----NVQKRAENLRDQIH 247
+ +D+ ++++ +LL+ + +L Q RA+ LR +I
Sbjct: 658 YLDDDEEDAYQQEQRIIGVFDNVQASLLATAEDGNKLEKKLALHYGGYQNRAKMLRAKIT 717
Query: 248 STVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTLQQRY 299
+E + EL+ F LQ E+ A S R+ L E+V ER Q++Y
Sbjct: 718 EAHTALEKSKHELDAFRTLQISEEAAISRRLEKLREEVAFVMRREREAQEQY 769
>sp|Q7SAF6|CEF1_NEUCR Pre-mRNA-splicing factor cef-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=cef-1 PE=3 SV=1
Length = 779
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 40/198 (20%)
Query: 4 PSATP-----GGMGSTP-RIGMTPSRDGSSFGVTPKGTPIRDELHINEDLD----MHDSA 53
P ATP G G+TP R+G TP R TP RD +N+ D + +
Sbjct: 421 PLATPLRAAGAGPGATPLRVGQTPLR-----------TP-RDTFALNDAGDEMSMVGGTP 468
Query: 54 KLEQRRQAELRRNLRLGLTSLPQPT-NEYQIVVQPPAEEDEEPEEKIEEDMSDRLAREKA 112
+ + R+ +R L+ GL SLP+P E+++ + ++ +EP+ + + +
Sbjct: 469 RDVKMREMSIRHQLKQGLASLPKPKETEWELEL---PDDQQEPKTAEQLEEDAAERDRRE 525
Query: 113 EEEARQQALL--RKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPPTSIEQADEI 170
E + LL ++R++V+QR+LPRP +++ SLL+ + S P + +
Sbjct: 526 REIREARELLERKRRTQVMQRDLPRP----VQVDYQSLLK---EASQAEDPVKV-----L 573
Query: 171 IRKELLKLLEHDNAKYPL 188
I +E L+ HD KYPL
Sbjct: 574 IAREAALLVAHDATKYPL 591
>sp|Q52G60|CEF1_MAGO7 Pre-mRNA-splicing factor CEF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=CEF1 PE=3 SV=1
Length = 773
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 142/351 (40%), Gaps = 80/351 (22%)
Query: 13 STPRIGMTPSRDGSSF---------------GVTPKGTPIRDELHINEDLDMHDSAKLEQ 57
STP TP R G++ G TP TP RD +N D S
Sbjct: 421 STPNPLATPMRSGANGMGMTPGGPGATPRAPGQTPLRTP-RDGFSLNSVGDEVAS----- 474
Query: 58 RRQAELRRNLRLGLTSLPQPTNEYQIVVQPPAEEDEEPEEKIEEDMSDRLAREKAEEEAR 117
R+ L GL +LP+P + P + + + E +EED S+R RE+ EA+
Sbjct: 475 ------RQQLLKGLAALPKPKETEWDLELPEDQMEVDAAEALEEDASERDRREREIREAQ 528
Query: 118 QQALLRKRSKVLQRELPRPPVASLELI----------------RNSLLRADGDKSSF--- 158
+ R+R++V+QR+LPRP V ++L R + + D F
Sbjct: 529 EALERRRRTQVMQRDLPRPAVVDIDLFLKHADSIPDPSQSMVAREAAMLMANDAIKFPAA 588
Query: 159 -VPP-----TSIEQADEIIRKE--LLKLLEHDNAKYPLDEKVAKKKKGNKRSANGPTAPI 210
V P +EQ D+ E L L+E +A P D +K ++ +N +
Sbjct: 589 GVKPARSSKVQVEQVDDAALAEARLQVLVEAGSAPKPED----VQKAWDREKSNSLLLGL 644
Query: 211 PVIEDFEE-----------DELQESFTLLS------DSRLNV-----QKRAENLRDQIHS 248
+D EE +E+Q+S + + +LN+ ++RAE LR +I
Sbjct: 645 ACYDDDEEEEQVAIMRAALEEVQQSIVSSAEKGNKLEKKLNLHHGGYKQRAEMLRKKIGE 704
Query: 249 TVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTLQQRY 299
+ + A L F L E++ + R+ L E+V ER Q+ Y
Sbjct: 705 ASEALSKANDALSAFKTLAVSEEITITRRLEALREEVAYVSRREREAQELY 755
>sp|Q54WZ0|CDC5L_DICDI Cell division cycle 5-like protein OS=Dictyostelium discoideum
GN=cdc5l PE=3 SV=1
Length = 800
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 21/196 (10%)
Query: 2 LTPSATPGGMGSTPRIGMTP---SRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKL--- 55
L+ + TP G+ P + TP S + S+ TP + N+ ++DS +
Sbjct: 395 LSNAQTPLKGGAGPNVSQTPLPKSVNNSTPFRTPNPLANQTPTQHNKKQSLNDSNEFAIE 454
Query: 56 EQRRQAELRRNLRLGLTSLPQPTNEYQIVV--QPPAEEDEEPEEKIEEDMSDRLAREKAE 113
++ ++ + + L L +LP PT EY++ + + P ED+ +E D S+ RE+ +
Sbjct: 455 DKFKRQQGKNQLLSNLKNLPSPTIEYKLELPSELPTIEDDT---TLELDNSEIHIREQQQ 511
Query: 114 EEARQQALLRKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPPTSIEQADEIIRK 173
+ ++Q LR RS VL+R LPR RN L ++ +I Q + I K
Sbjct: 512 LKHKEQFKLRNRSTVLKRNLPRS--------RN--LFPINKNNNNNNNNNINQDELRILK 561
Query: 174 ELLKLLEHDNAKYPLD 189
E+ +++ HDN +P D
Sbjct: 562 EINRIISHDNKTFPND 577
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 235 VQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERT 294
Q R+ + I Q+E + E +CF+AL+ E + R+ + V Q E+E
Sbjct: 719 YQNRSNTIIKNIDDMFDQLEQSEIEYQCFVALKNNESIQMEKRLKSIENQVYDQCEIESR 778
Query: 295 LQQRYGDLSTE 305
LQQ+Y L E
Sbjct: 779 LQQKYAQLLNE 789
>sp|Q6C8F5|CEF1_YARLI Pre-mRNA-splicing factor CEF1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CEF1 PE=3 SV=1
Length = 719
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 133/325 (40%), Gaps = 82/325 (25%)
Query: 29 GVTPKG-TPI-RDELHINEDLDMHDSAKLEQRRQAELRRNLRLGLTSLPQPTNEYQIVVQ 86
G TP G TPI RD L + ++ + L Q+ L SLP+P N+++I +
Sbjct: 415 GATPAGMTPIKRDALGLVGSVEATPVSILRQK------------LASLPKPKNDFEITAE 462
Query: 87 PPAEE----------DEEPEEKIEEDMSDRLAREKAEEEARQQALLRKRSKVLQRELPRP 136
E+ D P +K E+ R+A EE+ RQ+AL + RS+ LQR LPR
Sbjct: 463 DEEEDEEADKEKKPTDNLPVDKGEQARLKRIA----EEQERQEAL-KTRSQTLQRGLPRA 517
Query: 137 PVASLE-----------LIRNSLLRADGDKSSFVPPTSIEQADEIIRKELL---KLLEHD 182
V + L+R LR S S D+++ E L +L+E D
Sbjct: 518 TVPEVTYNDAIGQEVVALLREEELRFPNKGDSVALMQSEFSLDDLVDAETLIEMELMEGD 577
Query: 183 NAKYPLDEKVAKKKKGNKRSANGPTAPIPVI--------EDFE------EDELQESFTLL 228
+ +++G K TA +P E+F+ D+L E+ T L
Sbjct: 578 EQEV--------QEEGIK------TAALPGTVARSDESEEEFKTRVEIISDQLVETLTSL 623
Query: 229 S-----------DSRLNVQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSR 277
+ D KR L ++ S Q+E+ E+ F L + E++A R
Sbjct: 624 AETCQTEETALVDKFKAYAKRQATLSKKLTSRWSQLESVEVEIAVFSELARMEEIAIEQR 683
Query: 278 INGLWEDVQKQKELERTLQQRYGDL 302
L E+V + ER Q +Y +L
Sbjct: 684 SAALQEEVDWLVKKERAAQDKYREL 708
>sp|Q6BLT3|CEF1_DEBHA Pre-mRNA-splicing factor CEF1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CEF1 PE=3 SV=2
Length = 668
Score = 38.9 bits (89), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 48/188 (25%)
Query: 52 SAKLEQRRQAELRRNLRLGLTSLPQPTNEYQIVVQPPAEEDEEPEEKIEEDMSDRLAREK 111
S+KL+ + + + L+ LP+P N+ I++ P + +EEP E +D +R
Sbjct: 392 SSKLKSQWKKSVLNLLKSYFAKLPKPHNDIGIIL-PSYDPNEEPITASNEMSTD--SRVD 448
Query: 112 AEEEARQQALLR---------KRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPPT 162
E R +LR +RS+ +QRELP P +SL+ I D K S
Sbjct: 449 QGERLRNLEILRQVDEEKAKLRRSQAVQRELPIPKPSSLQQI-------DTSKCS----- 496
Query: 163 SIEQADEIIRKELLKLLEHDNAKYPLDEKVAKKKKGNKRSANGPTAPIPVIEDFEEDELQ 222
+ D +I E+ LL D AKY PT +I+D +E
Sbjct: 497 ---KLDLLIFNEMRTLLNSDYAKY-----------------EDPTFKTNLIDDLDE---- 532
Query: 223 ESFTLLSD 230
ESF ++++
Sbjct: 533 ESFGIVNN 540
>sp|Q4WHG0|CEF1_ASPFU Pre-mRNA-splicing factor cef1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=cef1 PE=3
SV=1
Length = 792
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 58/210 (27%)
Query: 1 MLTPSATPGGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINE------------DLD 48
M TP G+G+TP G G G TP TP RD+ +N+ D+
Sbjct: 423 MATPFRQANGLGATPLHG------GIGPGATPLRTP-RDQFALNQMEGGQLIGTTPRDIR 475
Query: 49 MHDSAKLEQRRQAELRRNLRLGLTSLPQPT-NEYQIVVQPPAEEDEEPEEKIEEDMSDRL 107
+H A + + +R L SLP+P E+++ +E P E E ++ +
Sbjct: 476 LHQKA---------VSQAIRSKLASLPKPKETEWEL--------EELPSESAEPTVAAEI 518
Query: 108 AREKAEEEARQQAL---------LRKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSF 158
+ E A E R++ L+++++V QR LPRP V ++ + + RA S
Sbjct: 519 SEEDAAERDRREREARERAAQAELKRQTQVYQRGLPRPSVLDIDAL---MARA----SQV 571
Query: 159 VPPTSIEQADEIIRKELLKLLEHDNAKYPL 188
P + +I KE L+ +D K+ L
Sbjct: 572 TDPI-----NGMIAKEAALLIANDAQKFRL 596
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 234 NVQKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELER 293
Q RA+ LR +I +E + EL F LQ E+ A S R+ L +DV + ER
Sbjct: 705 GYQNRAKTLRTKIVEASSALENSKYELNAFQTLQISEESAISRRLEKLRDDVAFVLKRER 764
Query: 294 TLQQRY 299
Q+ Y
Sbjct: 765 EAQETY 770
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.125 0.333
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,603,744
Number of Sequences: 539616
Number of extensions: 7903625
Number of successful extensions: 50302
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 1692
Number of HSP's that attempted gapping in prelim test: 43988
Number of HSP's gapped (non-prelim): 5845
length of query: 502
length of database: 191,569,459
effective HSP length: 122
effective length of query: 380
effective length of database: 125,736,307
effective search space: 47779796660
effective search space used: 47779796660
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 63 (28.9 bits)