BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044538
(158 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M1H3|AB4F_ARATH ABC transporter F family member 4 OS=Arabidopsis thaliana GN=ABCF4
PE=2 SV=1
Length = 723
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/197 (59%), Positives = 129/197 (65%), Gaps = 42/197 (21%)
Query: 3 YFHEPTESTSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNL 62
+F EPTE T P+LQLIEV SFSYPN D RLSNVD+GIDMGT VAIVGPN GKS L NL
Sbjct: 484 HFPEPTELTPPLLQLIEV-SFSYPNRPDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNL 542
Query: 63 LA---------VRRRQKLRIGRHSRHLEDLLTM--------------------EEAVHAK 93
LA +RR QKLRIGR+S+H DLLTM +EAV AK
Sbjct: 543 LAGDLVPTEGEMRRSQKLRIGRYSQHFVDLLTMGETPVQYLLRLHPDQEGFSKQEAVRAK 602
Query: 94 LRKFGLPGHNHLTPIANLSGGQKVRVMFTLVSMY------------HLDTQSIVAVAVTL 141
L KFGLP HNHL+PIA LSGGQK RV+FT +SM HLD QSI A+A L
Sbjct: 603 LGKFGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADAL 662
Query: 142 DEFAGGVVLVSHDSRLI 158
DEF GGVVLVSHDSRLI
Sbjct: 663 DEFTGGVVLVSHDSRLI 679
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 18 IEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLLAVRR 67
I + SFS L N + I G ++GPN GKS L LLA R+
Sbjct: 163 ITIESFSVSARGKELLKNASVRISHGKRYGLIGPNGMGKSTLLKLLAWRK 212
>sp|Q9FJH6|AB1F_ARATH ABC transporter F family member 1 OS=Arabidopsis thaliana GN=ABCF1
PE=1 SV=1
Length = 595
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 98/184 (53%), Gaps = 41/184 (22%)
Query: 13 PMLQLIEVISFSY-PNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLLA------- 64
P+LQ +EV SF Y P+ + N+D G+D+ + VA+VGPN GKS L L+
Sbjct: 378 PVLQFVEV-SFGYTPDY--LIYKNIDFGVDLDSRVALVGPNGAGKSTLLKLMTGELHPTE 434
Query: 65 --VRRRQKLRIGRHSRHLEDLL----------------TMEEAVHAKLRKFGLPGHNHLT 106
VRR L+I ++ +HL + L T EE + A + +FGL G +
Sbjct: 435 GMVRRHNHLKIAQYHQHLAEKLDLELPALLYMMREFPGTEEEKMRAAIGRFGLTGKAQVM 494
Query: 107 PIANLSGGQKVRVMFTLVSMY------------HLDTQSIVAVAVTLDEFAGGVVLVSHD 154
P+ NLS GQ+ RV+F ++ HLD ++I ++A L+E+ GG+VLVSHD
Sbjct: 495 PMKNLSDGQRSRVIFAWLAYKQPNMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHD 554
Query: 155 SRLI 158
RLI
Sbjct: 555 FRLI 558
>sp|Q9UG63|ABCF2_HUMAN ATP-binding cassette sub-family F member 2 OS=Homo sapiens GN=ABCF2
PE=1 SV=2
Length = 623
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 38/196 (19%)
Query: 1 IKYFHEPTESTSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSP-- 58
+ ++ P P + +++ +SF Y +N++ GID+ T VA+VGPN GKS
Sbjct: 381 LSFYFPPCGKIPPPVIMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVGPNGAGKSTLL 440
Query: 59 -------LPNLLAVRRRQKLRIGRHSRHLEDLLTME-----------------EAVHAKL 94
LP +R+ ++IGR+ +HL++ L ++ E + +
Sbjct: 441 KLLTGELLPTDGMIRKHSHVKIGRYHQHLQEQLDLDLSPLEYMMKCYPEIKEKEEMRKII 500
Query: 95 RKFGLPGHNHLTPIANLSGGQKVRVMFTLVSMY------------HLDTQSIVAVAVTLD 142
++GL G ++PI NLS GQK RV ++ HLD ++I A+A ++
Sbjct: 501 GRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAIN 560
Query: 143 EFAGGVVLVSHDSRLI 158
EF GG++LVSHD RLI
Sbjct: 561 EFEGGMMLVSHDFRLI 576
>sp|Q99LE6|ABCF2_MOUSE ATP-binding cassette sub-family F member 2 OS=Mus musculus GN=Abcf2
PE=2 SV=1
Length = 628
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 38/196 (19%)
Query: 1 IKYFHEPTESTSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSP-- 58
+ ++ P P + +++ +SF Y +N++ GID+ T VA+VGPN GKS
Sbjct: 386 LSFYFPPCGKIPPPVIMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVGPNGAGKSTLL 445
Query: 59 -------LPNLLAVRRRQKLRIGRHSRHLEDLLTME-----------------EAVHAKL 94
LP +R+ ++IGR+ +HL++ L ++ E + +
Sbjct: 446 KLLTGELLPTDGMIRKHSHVKIGRYHQHLQEQLDLDLSPLEYMMKCYPEIKEKEEMRKII 505
Query: 95 RKFGLPGHNHLTPIANLSGGQKVRVMFTLVSMY------------HLDTQSIVAVAVTLD 142
++GL G ++PI NLS GQK RV ++ HLD ++I A+A ++
Sbjct: 506 GRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAIN 565
Query: 143 EFAGGVVLVSHDSRLI 158
EF GG++LVSHD RLI
Sbjct: 566 EFEGGMMLVSHDFRLI 581
>sp|Q2KJA2|ABCF2_BOVIN ATP-binding cassette sub-family F member 2 OS=Bos taurus GN=ABCF2
PE=2 SV=1
Length = 625
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 38/196 (19%)
Query: 1 IKYFHEPTESTSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSP-- 58
+ ++ P P + +++ +SF Y +N++ GID+ T VA+VGPN GKS
Sbjct: 383 LSFYFPPCGKIPPPVIMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVGPNGAGKSTLL 442
Query: 59 -------LPNLLAVRRRQKLRIGRHSRHLEDLLTME-----------------EAVHAKL 94
LP +R+ ++IGR+ +HL++ L ++ E + +
Sbjct: 443 KLLTGELLPTDGMIRKHSHVKIGRYHQHLQEQLDLDLSPLEYMMKCYPEIKEKEEMRKII 502
Query: 95 RKFGLPGHNHLTPIANLSGGQKVRVMFTLVSMY------------HLDTQSIVAVAVTLD 142
++GL G ++PI NLS GQK RV ++ HLD ++I A+A ++
Sbjct: 503 GRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAIN 562
Query: 143 EFAGGVVLVSHDSRLI 158
+F GG++LVSHD RLI
Sbjct: 563 DFEGGMMLVSHDFRLI 578
>sp|Q7YR37|ABCF1_PANTR ATP-binding cassette sub-family F member 1 OS=Pan troglodytes
GN=ABCF1 PE=3 SV=1
Length = 807
Score = 83.2 bits (204), Expect = 6e-16, Method: Composition-based stats.
Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 37/174 (21%)
Query: 21 ISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLLA---------VRRRQKL 71
++F Y Q N+D GIDM + + IVGPN GKS L LL +R+ +L
Sbjct: 592 VTFGYEG-QKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTHGEMRKNHRL 650
Query: 72 RIGRHSRHLEDLLTMEEAVHAKLR---------------KFGLPGHNHLTPIANLSGGQK 116
+IG ++ + L MEE L+ +FGL H H I LSGGQK
Sbjct: 651 KIGFFNQQYAEQLRMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQK 710
Query: 117 VRVMFTLVS------------MYHLDTQSIVAVAVTLDEFAGGVVLVSHDSRLI 158
RV+F ++ +LD +SI A+ ++E+ G V++VSHD+RLI
Sbjct: 711 ARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLI 764
>sp|Q9USH9|YJQ1_SCHPO Uncharacterized ABC transporter ATP-binding protein C825.01
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC825.01 PE=1 SV=1
Length = 822
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 39/184 (21%)
Query: 12 SPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPL---------PNL 62
SP ++ +V SF+YP I S ++ G+D+ + VA+VGPN GK+ L P+
Sbjct: 591 SPAIKFQDV-SFNYPGGPTI-FSKLNFGLDLKSRVALVGPNGAGKTTLIKLILEKVQPST 648
Query: 63 LAVRRRQKLRIGRHSRHLEDLLTMEEAVHAKLR----------------KFGLPGHNHLT 106
+V R LR+ ++H+ D L M + LR ++GL G + +
Sbjct: 649 GSVVRHHGLRLALFNQHMGDQLDMRLSAVEWLRTKFGNKPEGEMRRIVGRYGLTGKSQVI 708
Query: 107 PIANLSGGQKVRVMFTLVSMYH------------LDTQSIVAVAVTLDEFAGGVVLVSHD 154
P+ LS GQ+ RV+F + M LD +I A+A L+ F GGVV ++HD
Sbjct: 709 PMGQLSDGQRRRVLFAFLGMTQPHILLLDEPTNALDIDTIDALADALNNFDGGVVFITHD 768
Query: 155 SRLI 158
RLI
Sbjct: 769 FRLI 772
>sp|Q767L0|ABCF1_PIG ATP-binding cassette sub-family F member 1 OS=Sus scrofa GN=ABCF1
PE=2 SV=1
Length = 807
Score = 83.2 bits (204), Expect = 7e-16, Method: Composition-based stats.
Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 37/174 (21%)
Query: 21 ISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLLA---------VRRRQKL 71
++F Y Q N+D GIDM + + IVGPN GKS L LL +R+ +L
Sbjct: 592 VTFGYEG-QKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTRGEMRKNHRL 650
Query: 72 RIGRHSRHLEDLLTMEEAVHAKLR---------------KFGLPGHNHLTPIANLSGGQK 116
+IG ++ + L MEE L+ +FGL H H I LSGGQK
Sbjct: 651 KIGFFNQQYAEQLRMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQK 710
Query: 117 VRVMFTLVS------------MYHLDTQSIVAVAVTLDEFAGGVVLVSHDSRLI 158
RV+F ++ +LD +SI A+ ++E+ G V++VSHD+RLI
Sbjct: 711 ARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLI 764
>sp|Q8NE71|ABCF1_HUMAN ATP-binding cassette sub-family F member 1 OS=Homo sapiens GN=ABCF1
PE=1 SV=2
Length = 845
Score = 82.8 bits (203), Expect = 7e-16, Method: Composition-based stats.
Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 37/174 (21%)
Query: 21 ISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLLA---------VRRRQKL 71
++F Y Q N+D GIDM + + IVGPN GKS L LL +R+ +L
Sbjct: 630 VTFGYQG-QKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTHGEMRKNHRL 688
Query: 72 RIGRHSRHLEDLLTMEEAVHAKLR---------------KFGLPGHNHLTPIANLSGGQK 116
+IG ++ + L MEE L+ +FGL H H I LSGGQK
Sbjct: 689 KIGFFNQQYAEQLRMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQK 748
Query: 117 VRVMFTLVS------------MYHLDTQSIVAVAVTLDEFAGGVVLVSHDSRLI 158
RV+F ++ +LD +SI A+ ++E+ G V++VSHD+RLI
Sbjct: 749 ARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLI 802
>sp|Q6MG08|ABCF1_RAT ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus
GN=Abcf1 PE=1 SV=1
Length = 839
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 37/174 (21%)
Query: 21 ISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLLA---------VRRRQKL 71
++F Y Q N+D GIDM + + IVGPN GKS L LL +R+ +L
Sbjct: 624 VTFGYEG-QKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTNGEMRKNHRL 682
Query: 72 RIGRHSRHLEDLLTMEEAVHAKLR---------------KFGLPGHNHLTPIANLSGGQK 116
+IG ++ + L MEE L+ +FGL H H I LSGGQK
Sbjct: 683 KIGFFNQQYAEQLHMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQK 742
Query: 117 VRVMFTLVS------------MYHLDTQSIVAVAVTLDEFAGGVVLVSHDSRLI 158
RV+F ++ +LD +SI A+ ++E+ G V++VSHD+RLI
Sbjct: 743 ARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLI 796
>sp|O42943|YBP8_SCHPO Uncharacterized ABC transporter ATP-binding protein C16H5.08c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16H5.08c PE=1 SV=1
Length = 618
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 87/180 (48%), Gaps = 42/180 (23%)
Query: 21 ISFSYP-NLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLLA---------VRRRQK 70
++FSY NL ++ GIDM + VAIVG N TGKS L NL+ V R
Sbjct: 393 VAFSYDGNLDHALYRDLSFGIDMDSRVAIVGKNGTGKSTLLNLITGLLIPIEGNVSRYSG 452
Query: 71 LRIGRHSRHLEDLLTMEEA--------------------VHAKLRKFGLPGHNHLTPIAN 110
L++ ++S+H D L +++ + L KFGL G + + I
Sbjct: 453 LKMAKYSQHSADQLPYDKSPLEYIMDTYKPKFPERELQQWRSVLGKFGLSGLHQTSEIRT 512
Query: 111 LSGGQKVRVMFTLVSMY------------HLDTQSIVAVAVTLDEFAGGVVLVSHDSRLI 158
LS G K RV+F +++ HLD SI A+A ++ + GGVVLVSHD RLI
Sbjct: 513 LSDGLKSRVVFAALALEQPHILLLDEPTNHLDITSIDALAKAINVWTGGVVLVSHDFRLI 572
>sp|Q6P542|ABCF1_MOUSE ATP-binding cassette sub-family F member 1 OS=Mus musculus GN=Abcf1
PE=1 SV=1
Length = 837
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 85/174 (48%), Gaps = 37/174 (21%)
Query: 21 ISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLLA---------VRRRQKL 71
++F Y Q N+D GIDM + + IVGPN GKS L LL +R+ +L
Sbjct: 622 VTFGYEG-QKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTNGEMRKNHRL 680
Query: 72 RIGRHSRHLEDLLTMEEAVHAKLR---------------KFGLPGHNHLTPIANLSGGQK 116
+IG ++ + L MEE L+ +FGL H H I LSGGQK
Sbjct: 681 KIGFFNQQYAEQLHMEETPTEYLQRSFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQK 740
Query: 117 VRVMFTLVS------------MYHLDTQSIVAVAVTLDEFAGGVVLVSHDSRLI 158
RV+F ++ +LD +SI A+ ++++ G V++VSHD+RLI
Sbjct: 741 ARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINDYKGAVIVVSHDARLI 794
>sp|Q8T6B7|ABCF2_DICDI ABC transporter F family member 2 OS=Dictyostelium discoideum
GN=abcF2 PE=3 SV=1
Length = 593
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 40/192 (20%)
Query: 7 PTESTSPMLQLIEVISFSYPNLQ-DIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLLA- 64
P +P + + ++FSY + D+ N+D+ ID+ + +A+VGPN GKS L L+
Sbjct: 355 PCGELAPPIMHFDNVTFSYSGKEADVLYRNLDLAIDLDSRIALVGPNGAGKSTLLKLMVG 414
Query: 65 --------VRRRQKLRIGRHSRHLEDLLTME------------------EAVHAKLRKFG 98
+++ L++ R+ +H ++L + E ++ +FG
Sbjct: 415 QISPTQGFIKKHSHLKMARYHQHAHEVLDLTATPLDFVRSKFAHMNKDTEEWRREIGRFG 474
Query: 99 LPGHNHLTPIANLSGGQKVRVMFTLVSMY------------HLDTQSIVAVAVTLDEFAG 146
+ G I +S G K R++F L+++ HLD + I ++A+ ++ F G
Sbjct: 475 VTGKAQTEAIGCMSDGIKSRLIFCLMALENPHLLLLDEPTNHLDMECIDSLALAINSFPG 534
Query: 147 GVVLVSHDSRLI 158
G++LVSHD RLI
Sbjct: 535 GMILVSHDFRLI 546
>sp|Q66H39|ABCF3_RAT ATP-binding cassette sub-family F member 3 OS=Rattus norvegicus
GN=Abcf3 PE=2 SV=1
Length = 709
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 39/185 (21%)
Query: 11 TSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLL------- 63
+ P+LQL EV + P + I S + + D+ + + +VG N GKS + LL
Sbjct: 488 SPPILQLDEVDFYYDP--KHIIFSRLSVSADLESRICVVGENGAGKSTMLKLLMGDLAPV 545
Query: 64 -AVRRRQK-LRIGRHSRHLEDLLTM----------------EEAVHAKLRKFGLPGHNHL 105
+R + L+IG S+H + L + EE +L ++G+ G +
Sbjct: 546 RGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGRPEEEYRHQLGRYGISGELAM 605
Query: 106 TPIANLSGGQKVRVMFTLVSM------------YHLDTQSIVAVAVTLDEFAGGVVLVSH 153
P+A+LSGGQK RV F ++M HLD ++I A+ L+ F GGVVLVSH
Sbjct: 606 RPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGHALNNFRGGVVLVSH 665
Query: 154 DSRLI 158
D R I
Sbjct: 666 DERFI 670
>sp|Q5R9Z5|ABCF3_PONAB ATP-binding cassette sub-family F member 3 OS=Pongo abelii GN=ABCF3
PE=2 SV=1
Length = 709
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 39/185 (21%)
Query: 11 TSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLL------- 63
+ P+LQL EV + P + + S + + D+ + + +VG N GKS + LL
Sbjct: 488 SPPILQLDEVDFYYDP--KHVIFSRLSVSADLESRICVVGENGAGKSTMLKLLLGDLAPV 545
Query: 64 -AVRRRQK-LRIGRHSRHLEDLLTM----------------EEAVHAKLRKFGLPGHNHL 105
+R + L+IG S+H + L + EE +L ++G+ G +
Sbjct: 546 RGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGRPEEEYRHQLGRYGISGELAM 605
Query: 106 TPIANLSGGQKVRVMFTLVSM------------YHLDTQSIVAVAVTLDEFAGGVVLVSH 153
P+A+LSGGQK RV F ++M HLD ++I A+ L+ F GGV+LVSH
Sbjct: 606 RPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGRALNNFRGGVILVSH 665
Query: 154 DSRLI 158
D R I
Sbjct: 666 DERFI 670
>sp|Q8K268|ABCF3_MOUSE ATP-binding cassette sub-family F member 3 OS=Mus musculus GN=Abcf3
PE=1 SV=1
Length = 709
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 39/185 (21%)
Query: 11 TSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLL------- 63
+ P+LQL EV F Y I S + + D+ + + +VG N GKS + LL
Sbjct: 488 SPPILQLDEV-DFYYDPKHSI-FSRLSVSADLESRICVVGENGAGKSTMLKLLMGDLSPV 545
Query: 64 -AVRRRQK-LRIGRHSRHLEDLLTM----------------EEAVHAKLRKFGLPGHNHL 105
+R + L+IG S+H + L + EE +L ++G+ G +
Sbjct: 546 RGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGLPEEEYRHQLGRYGISGELAM 605
Query: 106 TPIANLSGGQKVRVMFTLVSM------------YHLDTQSIVAVAVTLDEFAGGVVLVSH 153
P+A+LSGGQK RV F ++M HLD ++I A+ L+ F GGV+LVSH
Sbjct: 606 RPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGQALNNFRGGVILVSH 665
Query: 154 DSRLI 158
D R I
Sbjct: 666 DERFI 670
>sp|Q9NUQ8|ABCF3_HUMAN ATP-binding cassette sub-family F member 3 OS=Homo sapiens GN=ABCF3
PE=1 SV=2
Length = 709
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 39/185 (21%)
Query: 11 TSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLL------- 63
+ P+LQL EV + P + + S + + D+ + + +VG N GKS + LL
Sbjct: 488 SPPILQLDEVDFYYDP--KHVIFSRLSVSADLESRICVVGENGAGKSTMLKLLLGDLAPV 545
Query: 64 -AVRRRQK-LRIGRHSRHLEDLLTM----------------EEAVHAKLRKFGLPGHNHL 105
+R + L+IG S+H + L + EE +L ++G+ G +
Sbjct: 546 RGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGRPEEEYRHQLGRYGISGELAM 605
Query: 106 TPIANLSGGQKVRVMFTLVSM------------YHLDTQSIVAVAVTLDEFAGGVVLVSH 153
P+A+LSGGQK RV F ++M HLD ++I A+ L+ F GGV+LVSH
Sbjct: 606 RPLASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGRALNNFRGGVILVSH 665
Query: 154 DSRLI 158
D R I
Sbjct: 666 DERFI 670
>sp|Q8T6B4|ABCF4_DICDI ABC transporter F family member 4 OS=Dictyostelium discoideum
GN=abcF4 PE=3 SV=1
Length = 1142
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 89/192 (46%), Gaps = 39/192 (20%)
Query: 4 FHEPTESTSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLL 63
F +P T P+L +V F Y + +D+GIDM + +A+VG N GKS L L+
Sbjct: 912 FPQPEHLTPPLLVFKDV-CFGYEG-RPTMFKKLDIGIDMDSKIALVGMNGVGKSTLMKLM 969
Query: 64 A---------VRRRQKLRIGRHSRHLEDLL--TME--------------EAVHAKLRKFG 98
+ R +K+R+ R S+H D L TM + + L +FG
Sbjct: 970 NGDLHETTGYIERSRKMRVARFSQHFVDQLDTTMTPIEYFQSKFNNPPVQQIRNHLGRFG 1029
Query: 99 LPGHNHLTPIANLSGGQKVRVMFTLVS------------MYHLDTQSIVAVAVTLDEFAG 146
+ L I LSGGQK RV+ ++ HLD +I A+A ++ F G
Sbjct: 1030 ICNSLPLHKITTLSGGQKSRVILAELAWAEPHILLLDEPTNHLDIDAIEALAEGINAFTG 1089
Query: 147 GVVLVSHDSRLI 158
GVVL+SH+ LI
Sbjct: 1090 GVVLISHNQHLI 1101
>sp|P40024|ARB1_YEAST ABC transporter ATP-binding protein ARB1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ARB1 PE=1
SV=1
Length = 610
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 40/190 (21%)
Query: 9 ESTSPMLQLIEVISFSYP-NLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPL-------- 59
E P + + ISF Y N + +++ G+DM + +A+VGPN GKS L
Sbjct: 386 ERLPPPVLAFDDISFHYESNPSENLYEHLNFGVDMDSRIALVGPNGVGKSTLLKIMTGEL 445
Query: 60 -PNLLAVRRRQKLRIGRHSRHLEDLLTMEEAV------------------HAKLRKFGLP 100
P V R +++G +S+H +D L + ++ +L ++GL
Sbjct: 446 TPQSGRVSRHTHVKLGVYSQHSQDQLDLTKSALEFVRDKYSNISQDFQFWRGQLGRYGLT 505
Query: 101 GHNHLTPIANLSGGQKVRVMFTLVSMYH------------LDTQSIVAVAVTLDEFAGGV 148
G +A LS GQ+ RV+F L+++ LD +I ++A ++EF GGV
Sbjct: 506 GEGQTVQMATLSEGQRSRVVFALLALEQPNVLLLDEPTNGLDIPTIDSLADAINEFNGGV 565
Query: 149 VLVSHDSRLI 158
V+VSHD RL+
Sbjct: 566 VVVSHDFRLL 575
>sp|Q8H0V6|AB3F_ARATH ABC transporter F family member 3 OS=Arabidopsis thaliana GN=ABCF3
PE=2 SV=1
Length = 715
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 86/192 (44%), Gaps = 38/192 (19%)
Query: 4 FHEPTESTSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLL 63
F P + P + SF YP + N++ GID+ + +A+VGPN GKS + L+
Sbjct: 492 FPTPDDKPGPPIISFSDASFGYPG-GPLLFRNLNFGIDLDSRIAMVGPNGIGKSTILKLI 550
Query: 64 A---------VRRRQKLRIGRHSRHLEDLLTM----------------EEAVHAKLRKFG 98
+ V R K+R+ S+H D L + E+ + + L G
Sbjct: 551 SGDLQPSSGTVFRSAKVRVAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQKLRSHLGSLG 610
Query: 99 LPGHNHLTPIANLSGGQKVRVMFTLVSMY------------HLDTQSIVAVAVTLDEFAG 146
+ G+ L P+ LSGGQK RV F ++ HLD ++ A+ L F G
Sbjct: 611 VTGNLALQPMYTLSGGQKSRVAFAKITFKKPHLLLLDEPSNHLDLDAVEALIQGLVLFQG 670
Query: 147 GVVLVSHDSRLI 158
G+ +VSHD LI
Sbjct: 671 GICMVSHDEHLI 682
>sp|O59672|YB89_SCHPO Uncharacterized ABC transporter ATP-binding protein C29A3.09c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC29A3.09c PE=3 SV=1
Length = 736
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 82/179 (45%), Gaps = 39/179 (21%)
Query: 13 PMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLLA-------- 64
P+LQ+ +V +F Y I L +VD+ + M + + +VGPN GKS + LL
Sbjct: 516 PILQMSDV-NFEYVPGHPI-LKHVDIDVQMDSRIGVVGPNGAGKSTMLKLLIEQLHPTSG 573
Query: 65 -VRRRQKLRIGRHSRHLEDLLTM----------------EEAVHAKLRKFGLPGHNHLTP 107
V R +LRI ++H D L + EE L FG+ G L
Sbjct: 574 IVSRHPRLRIAYFAQHHVDTLDLNLNALSFLAKTFPGKGEEEYRRHLGAFGVSGPLALQK 633
Query: 108 IANLSGGQKVRVMFTLVSMY------------HLDTQSIVAVAVTLDEFAGGVVLVSHD 154
+ LSGGQK RV F + + HLD +S+ A+ + F GGV+LVSHD
Sbjct: 634 MITLSGGQKSRVAFACLGLQNPHILILDEPTNHLDMESMDALTRAVKRFQGGVILVSHD 692
>sp|P43535|GCN20_YEAST Protein GCN20 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GCN20 PE=1 SV=1
Length = 752
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 39/192 (20%)
Query: 4 FHEPTESTSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLL 63
F E + + P++QL +V SF Y ++ L +V++ + M + +A+VG N GK+ L ++
Sbjct: 521 FPECDKLSPPIIQLQDV-SFGYDE-NNLLLKDVNLDVQMDSRIALVGANGCGKTTLLKIM 578
Query: 64 A---------VRRRQKLRIGRHSRHLEDLLTM----------------EEAVHAKLRKFG 98
V R +LRIG ++H D + + +E L FG
Sbjct: 579 MEQLRPLKGFVSRNPRLRIGYFTQHHVDSMDLTTSAVDWMSKSFPGKTDEEYRRHLGSFG 638
Query: 99 LPGHNHLTPIANLSGGQKVRVMFTLVSMY------------HLDTQSIVAVAVTLDEFAG 146
+ G L + LSGGQK RV F + + HLDT + A+ L F G
Sbjct: 639 ITGTLGLQKMQLLSGGQKSRVAFAALCLNNPHILVLDEPSNHLDTTGLDALVEALKNFNG 698
Query: 147 GVVLVSHDSRLI 158
GV++VSHD +I
Sbjct: 699 GVLMVSHDISVI 710
>sp|Q8SRV5|ABCF3_ENCCU Probable ATP-binding cassette sub-family F member 3 homolog
OS=Encephalitozoon cuniculi (strain GB-M1) GN=ECU05_1190
PE=3 SV=1
Length = 554
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 85/193 (44%), Gaps = 41/193 (21%)
Query: 1 IKYFHEPTESTSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLP 60
IK+ T + +++ + V+ FSY + L + M I+ + + +VG N GKS
Sbjct: 337 IKFTFSSTPAQGALIEFVNVV-FSYGCGK--VLGGLSMKINSDSRIVVVGANGQGKSTFL 393
Query: 61 NLLAVR---------RRQKLRIGRHSRHLEDLL--------------TMEEAVHAKLRKF 97
LLA + R LR+G ++H D L T EEA A L F
Sbjct: 394 KLLAGKLEATEGSIIRAPSLRVGYFAQHHIDHLRVNENVLDFMMKSYTQEEARRA-LASF 452
Query: 98 GLPGHNHLTPIANLSGGQKVRVMFTLVS------------MYHLDTQSIVAVAVTLDEFA 145
GL N I LSGGQK R+ F +++ HLD +SI A+A L F
Sbjct: 453 GLSVDNQC--IGTLSGGQKSRLGFAIINGLSPNLLVLDEPTNHLDMESIDALAEALGRFN 510
Query: 146 GGVVLVSHDSRLI 158
G VV VSHD I
Sbjct: 511 GAVVCVSHDLSFI 523
>sp|P0A9U3|YBIT_ECOLI Uncharacterized ABC transporter ATP-binding protein YbiT
OS=Escherichia coli (strain K12) GN=ybiT PE=3 SV=1
Length = 530
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 38/164 (23%)
Query: 33 LSNVDMGIDMGTCVAIVGPNDTGKSPL---------PNLLAVRRRQKLRIG----RHSRH 79
N+++ +++G +A++G N GKS L P+ V+ + RIG H
Sbjct: 335 FKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSENARIGYYAQDHEYE 394
Query: 80 LEDLLTM-------------EEAVHAKLRKFGLPGHNHLTPIANLSGGQKVRVMFTLVSM 126
E+ LT+ E+AV + L + + P LSGG+K R++F + M
Sbjct: 395 FENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMM 454
Query: 127 Y------------HLDTQSIVAVAVTLDEFAGGVVLVSHDSRLI 158
HLD +SI ++ + L+ + G ++ VSHD +
Sbjct: 455 QKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFV 498
>sp|P0A9U4|YBIT_ECOL6 Uncharacterized ABC transporter ATP-binding protein YbiT
OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=ybiT PE=3 SV=1
Length = 530
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 38/164 (23%)
Query: 33 LSNVDMGIDMGTCVAIVGPNDTGKSPL---------PNLLAVRRRQKLRIG----RHSRH 79
N+++ +++G +A++G N GKS L P+ V+ + RIG H
Sbjct: 335 FKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSENARIGYYAQDHEYE 394
Query: 80 LEDLLTM-------------EEAVHAKLRKFGLPGHNHLTPIANLSGGQKVRVMFTLVSM 126
E+ LT+ E+AV + L + + P LSGG+K R++F + M
Sbjct: 395 FENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMM 454
Query: 127 Y------------HLDTQSIVAVAVTLDEFAGGVVLVSHDSRLI 158
HLD +SI ++ + L+ + G ++ VSHD +
Sbjct: 455 QKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFV 498
>sp|P0A9U5|YBIT_ECO57 Uncharacterized ABC transporter ATP-binding protein YbiT
OS=Escherichia coli O157:H7 GN=ybiT PE=3 SV=1
Length = 530
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 38/164 (23%)
Query: 33 LSNVDMGIDMGTCVAIVGPNDTGKSPL---------PNLLAVRRRQKLRIG----RHSRH 79
N+++ +++G +A++G N GKS L P+ V+ + RIG H
Sbjct: 335 FKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSENARIGYYAQDHEYE 394
Query: 80 LEDLLTM-------------EEAVHAKLRKFGLPGHNHLTPIANLSGGQKVRVMFTLVSM 126
E+ LT+ E+AV + L + + P LSGG+K R++F + M
Sbjct: 395 FENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMM 454
Query: 127 Y------------HLDTQSIVAVAVTLDEFAGGVVLVSHDSRLI 158
HLD +SI ++ + L+ + G ++ VSHD +
Sbjct: 455 QKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFV 498
>sp|P63389|YHES_ECOLI Uncharacterized ABC transporter ATP-binding protein YheS
OS=Escherichia coli (strain K12) GN=yheS PE=1 SV=1
Length = 637
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 40/192 (20%)
Query: 4 FHEPTESTSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLL 63
F P +P+L++ E +S Y + I L ++ + + G+ + ++G N GKS L LL
Sbjct: 302 FRAPESLPNPLLKM-EKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLL 358
Query: 64 A---------VRRRQKLRIGRHSRHLEDLLTMEEA------------VHAKLRK----FG 98
A + + +++G ++H + L +E+ + KLR FG
Sbjct: 359 AGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADESPIQHLARLAPQELEQKLRDYLGGFG 418
Query: 99 LPGHNHLTPIANLSGGQKVRVMFTLV------------SMYHLDTQSIVAVAVTLDEFAG 146
G SGG+K R++ L+ HLD A+ L EF G
Sbjct: 419 FQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEG 478
Query: 147 GVVLVSHDSRLI 158
+V+VSHD L+
Sbjct: 479 ALVVVSHDRHLL 490
>sp|P63390|YHES_ECO57 Uncharacterized ABC transporter ATP-binding protein YheS
OS=Escherichia coli O157:H7 GN=yheS PE=3 SV=1
Length = 637
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 40/192 (20%)
Query: 4 FHEPTESTSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLL 63
F P +P+L++ E +S Y + I L ++ + + G+ + ++G N GKS L LL
Sbjct: 302 FRAPESLPNPLLKM-EKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLL 358
Query: 64 A---------VRRRQKLRIGRHSRHLEDLLTMEEA------------VHAKLRK----FG 98
A + + +++G ++H + L +E+ + KLR FG
Sbjct: 359 AGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADESPIQHLARLAPQELEQKLRDYLGGFG 418
Query: 99 LPGHNHLTPIANLSGGQKVRVMFTLV------------SMYHLDTQSIVAVAVTLDEFAG 146
G SGG+K R++ L+ HLD A+ L EF G
Sbjct: 419 FQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEG 478
Query: 147 GVVLVSHDSRLI 158
+V+VSHD L+
Sbjct: 479 ALVVVSHDRHLL 490
>sp|O14134|ELF1_SCHPO mRNA export factor elf1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=elf1 PE=1 SV=1
Length = 1057
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 13/84 (15%)
Query: 88 EAVHAKLRKFGLPGH-NHLTPIANLSGGQKVRVMFTLVSMYH------------LDTQSI 134
E + A GLPG +PI++LSGGQKV+V+ + LD ++
Sbjct: 887 EDIRAHFEDVGLPGDIADYSPISSLSGGQKVKVVIAACLWNNPQLLVLDEPTNFLDRDAL 946
Query: 135 VAVAVTLDEFAGGVVLVSHDSRLI 158
+AV + ++ GGVV++SH+ +
Sbjct: 947 GGLAVAIRDWEGGVVMISHNEEFV 970
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 22 SFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLL---------AVRRRQKLR 72
S++YPN + L NV +G+ + + VAI+GPN GKS L +L V + LR
Sbjct: 698 SYTYPNAKKKSLDNVTVGLSLSSRVAILGPNGAGKSTLIKVLIGEVIPQEGKVFKHPNLR 757
Query: 73 IGRHSRH 79
+G ++H
Sbjct: 758 VGYVAQH 764
>sp|P44808|Y658_HAEIN Uncharacterized ABC transporter ATP-binding protein HI_0658
OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd) GN=HI_0658 PE=1 SV=1
Length = 638
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 42/195 (21%)
Query: 4 FHEPTESTSPMLQLIEVISFSY---PNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLP 60
F P +P++ +IE S Y + +I LS + + + G+ + ++G N GKS L
Sbjct: 302 FRPPQSLPNPLV-MIEQASAGYGIGESAVEI-LSKIKLNLVPGSRIGLLGKNGAGKSTLI 359
Query: 61 NLLA---------VRRRQKLRIGRHSRHLEDLLTMEEA----------------VHAKLR 95
LLA V+ + +++G ++H D L +E+ V L
Sbjct: 360 KLLAGELTALSGTVQLAKGVQLGYFAQHQLDTLRADESALWHMQKLAPEQTEQQVRDYLG 419
Query: 96 KFGLPGHNHLTPIANLSGGQKVRVMFTLV------------SMYHLDTQSIVAVAVTLDE 143
F G + + SGG+K R++ L+ HLD A+ L +
Sbjct: 420 SFAFHGDKVNQAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALVD 479
Query: 144 FAGGVVLVSHDSRLI 158
+ G +V+VSHD L+
Sbjct: 480 YEGSLVVVSHDRHLL 494
Score = 31.2 bits (69), Expect = 2.5, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
Query: 73 IGRHSRHLE--DLLTMEEAVHAKLRKFGLPGHNHLTPIANLSGGQKVRVMFTLVSMY--- 127
I R LE D T++ + L G + P+ SGG ++R+ +
Sbjct: 110 IARIHGQLETLDAWTIQSRAASLLHGLGFSQEETIQPVKAFSGGWRMRLNLAQALLCPSD 169
Query: 128 ---------HLDTQSIVAVAVTLDEFAGGVVLVSHD 154
HLD +++ + L ++ G +VL+SHD
Sbjct: 170 LLLLDEPTNHLDLDAVIWLERWLVQYQGTLVLISHD 205
>sp|O05519|YDIF_BACSU Uncharacterized ABC transporter ATP-binding protein YdiF
OS=Bacillus subtilis (strain 168) GN=ydiF PE=3 SV=2
Length = 642
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 37/177 (20%)
Query: 18 IEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPL---------PNLLAVRRR 68
++ ++ SY N Q L+ V + G A+VGPN GKS L P+ +
Sbjct: 329 VQDLTISYEN-QPPLLTEVSFMLTRGESAALVGPNGIGKSTLLKTLIDTLKPDQGTISYG 387
Query: 69 QKLRIGRHSRHLEDLLTM---------------EEAVHAKLRKFGLPGHNHLTPIANLSG 113
+ +G + + +L + E+ + L F G + L P+ +LSG
Sbjct: 388 SNVSVGYYDQEQAELTSSKRVLDELWDEYPGLPEKEIRTCLGNFLFSGDDVLKPVHSLSG 447
Query: 114 GQKVRVMFTLVSMY------------HLDTQSIVAVAVTLDEFAGGVVLVSHDSRLI 158
G+K R+ + + HLD S + L ++ G ++ VSHD I
Sbjct: 448 GEKARLALAKLMLQKANFLILDEPTNHLDLDSKEVLENALIDYPGTLLFVSHDRYFI 504
Score = 32.7 bits (73), Expect = 0.91, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 12/80 (15%)
Query: 87 EEAVHAKLRKFGLPGHNHLTPIANLSGGQKVRVMFTLVSMY------------HLDTQSI 134
E V + L G + T + +LSGGQK R+ + + HLD ++
Sbjct: 139 EADVRSVLHGLGFSHFDDSTQVQSLSGGQKTRLALGKLLLTQPDLLILDEPTNHLDIDTL 198
Query: 135 VAVAVTLDEFAGGVVLVSHD 154
+ L ++G +++VSHD
Sbjct: 199 TWLEHYLQGYSGAILIVSHD 218
>sp|Q81PZ8|Y2641_BACAN Putative ABC transporter ATP-binding protein
BA_2641/GBAA_2641/BAS2461 OS=Bacillus anthracis
GN=BA_2641 PE=3 SV=1
Length = 566
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 2 KYFHEPTESTSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLP- 60
K F + T + +L+ +E +SFSYPN Q L NV++ I G VA++G N GKS L
Sbjct: 287 KAFCKDTPTKKELLK-VENLSFSYPNKQK-ALENVNLSIYEGEIVALLGHNGAGKSTLAH 344
Query: 61 NLLAVRRRQKLRI 73
+L+ + + + RI
Sbjct: 345 SLIGINKTKNSRI 357
>sp|Q5L3R0|ECFA1_GEOKA Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Geobacillus kaustophilus (strain HTA426) GN=ecfA1
PE=3 SV=1
Length = 279
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 11 TSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLL 63
P+L IE +SF YPN D + NV + G +AIVG N +GKS + +L
Sbjct: 2 AEPILS-IEGVSFRYPNQSDYAVQNVSFTAERGEWLAIVGHNGSGKSTIARML 53
>sp|Q6HI76|Y2424_BACHK Putative ABC transporter ATP-binding protein BT9727_2424
OS=Bacillus thuringiensis subsp. konkukian (strain
97-27) GN=BT9727_2424 PE=3 SV=1
Length = 566
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 2 KYFHEPTESTSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLP- 60
K F + T + +L+ +E +SFSYPN Q L NV++ I G VA++G N GKS L
Sbjct: 287 KAFCKDTPTKKELLK-VENLSFSYPNKQK-GLENVNLSIYEGEIVALLGHNGAGKSTLAH 344
Query: 61 NLLAVRRRQKLRI 73
+L+ + + + RI
Sbjct: 345 SLIGINKTKNSRI 357
>sp|Q08972|NEW1_YEAST [NU+] prion formation protein 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NEW1 PE=1 SV=1
Length = 1196
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 21 ISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPL---------PNLLAVRRRQKL 71
++FSYP Q LS+V + + + VA +GPN GKS L PN V + L
Sbjct: 817 VTFSYPGAQKPSLSHVSCSLSLSSRVACLGPNGAGKSTLIKLLTGELVPNEGKVEKHPNL 876
Query: 72 RIGRHSRH 79
RIG ++H
Sbjct: 877 RIGYIAQH 884
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 15/69 (21%)
Query: 103 NHLTPIANLSGGQKVRVMFTLVSMY-------------HLDTQSIVAVAVTLDEFAGGVV 149
NH TP+ +LSGGQ V+V+ +M+ +LD S+ A+AV + +++GGVV
Sbjct: 1026 NH-TPLGSLSGGQLVKVVIA-GAMWNNPHLLVLDEPTNYLDRDSLGALAVAIRDWSGGVV 1083
Query: 150 LVSHDSRLI 158
++SH++ +
Sbjct: 1084 MISHNNEFV 1092
>sp|Q7NZU6|MSBA_CHRVO Lipid A export ATP-binding/permease protein MsbA OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=msbA PE=3 SV=1
Length = 584
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 18 IEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLL 63
+ +SF+YPN+ LS +D+ I G VA+VG + +GK+ L +L+
Sbjct: 343 FDAVSFAYPNVDSPALSGIDLEIQPGETVALVGSSGSGKTTLASLV 388
>sp|Q737I0|Y2668_BACC1 Putative ABC transporter ATP-binding protein BCE_2668 OS=Bacillus
cereus (strain ATCC 10987) GN=BCE_2668 PE=3 SV=1
Length = 566
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 4 FHEPTESTSPMLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLP-NL 62
F + T + +L+ +E +SFSYPN Q + L NV+ + G VA++G N GKS L +L
Sbjct: 289 FCKDTPTKKELLK-VENLSFSYPNKQKV-LDNVNFSLFKGEIVALLGHNGAGKSTLAHSL 346
Query: 63 LAVRRRQKLRI 73
+ + + + RI
Sbjct: 347 IGINKTKNDRI 357
>sp|Q9HT73|ZNUC_PSEAE Zinc import ATP-binding protein ZnuC OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=znuC PE=3 SV=1
Length = 269
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 41/166 (24%)
Query: 33 LSNVDMGIDMGTCVAIVGPNDTGKSPL---------PNLLAVRRRQKLRIGRHSRHLEDL 83
LS+VD+ I+ G V ++GPN GK+ L P++ V RR +L IG + L
Sbjct: 21 LSDVDLAIEPGQIVTLIGPNGAGKTTLVRSVLGLLKPHVGEVWRRPRLTIGYMPQKLHVD 80
Query: 84 LTM---------------EEAVHAKLRKFGLPGHNHLTPIANLSGGQKVRVMFTLV---- 124
T+ E A LR+ G H P+ ++SGG+ RV+
Sbjct: 81 ATLPLSVLRFLRLVPGVKREQALAALREVG-AAHVLERPLQSISGGELQRVLLARALLRK 139
Query: 125 -SMYHLD--TQSI-VAVAVTL--------DEFAGGVVLVSHDSRLI 158
+ LD Q + VA L D + GV++VSHD L+
Sbjct: 140 PELLVLDEPVQGVDVAGQAELYRLIGKLRDRYGCGVLMVSHDLHLV 185
>sp|Q02DK9|ZNUC_PSEAB Zinc import ATP-binding protein ZnuC OS=Pseudomonas aeruginosa
(strain UCBPP-PA14) GN=znuC PE=3 SV=1
Length = 269
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 41/166 (24%)
Query: 33 LSNVDMGIDMGTCVAIVGPNDTGKSPL---------PNLLAVRRRQKLRIGRHSRHLEDL 83
LS+VD+ I+ G V ++GPN GK+ L P++ V RR +L IG + L
Sbjct: 21 LSDVDLAIEPGQIVTLIGPNGAGKTTLVRSVLGLLKPHVGEVWRRPRLTIGYMPQKLHVD 80
Query: 84 LTM---------------EEAVHAKLRKFGLPGHNHLTPIANLSGGQKVRVMFTLV---- 124
T+ E A LR+ G H P+ ++SGG+ RV+
Sbjct: 81 ATLPLSVLRFLRLVPGVKREQALAALREVG-AAHVLERPLQSISGGELQRVLLARALLRK 139
Query: 125 -SMYHLD--TQSI-VAVAVTL--------DEFAGGVVLVSHDSRLI 158
+ LD Q + VA L D + GV++VSHD L+
Sbjct: 140 PELLVLDEPVQGVDVAGQAELYRLIGKLRDRYGCGVLMVSHDLHLV 185
>sp|Q3KE48|MACB2_PSEPF Macrolide export ATP-binding/permease protein MacB 2 OS=Pseudomonas
fluorescens (strain Pf0-1) GN=macB2 PE=3 SV=1
Length = 651
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 85/207 (41%), Gaps = 61/207 (29%)
Query: 11 TSPMLQLIEVI-SFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLLAV---R 66
+ P+LQL + SF+ + + + L N+D+ I G VAI+G + +GKS L N+L
Sbjct: 2 SEPLLQLTGISRSFTAGDREFLALKNIDLTIHAGEMVAIIGASGSGKSTLMNILGCLDYA 61
Query: 67 RRQKLRI-GRHSRHLED-------------------LL-----------------TMEEA 89
RI GR +R L++ LL T E
Sbjct: 62 TAGSYRINGRETRDLDNQALAELRRDYFGFIFQRYHLLPHLSAVHNVEMPAIYAGTPEPQ 121
Query: 90 VHAKLR----KFGLPGHNHLTPIANLSGGQKVRVMFTLVSMY------------HLDTQS 133
HA+ R + GL GH P + LSGGQ+ RV M LDT S
Sbjct: 122 RHARARELLARLGLEGHLTHRP-SQLSGGQQQRVSIARALMNGGEVILADEPTGALDTTS 180
Query: 134 IVAVAVTLDEF-AGG--VVLVSHDSRL 157
V L E A G V+LV+HD ++
Sbjct: 181 GKEVMRILLELHAAGHTVILVTHDPKV 207
>sp|Q0A9E2|ZNUC_ALHEH Zinc import ATP-binding protein ZnuC OS=Alkalilimnicola ehrlichei
(strain MLHE-1) GN=znuC PE=3 SV=1
Length = 259
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 39/165 (23%)
Query: 33 LSNVDMGIDMGTCVAIVGPNDTGKSPLPNLLA---------VRRRQKLRIGRHSRH--LE 81
L NVD+ ++ G V +VGPN +GKS L +L V RR LR+G +H ++
Sbjct: 37 LCNVDLVVESGQVVTLVGPNGSGKSTLVQVLTGVIRDYRGQVGRRTGLRVGYVPQHFRID 96
Query: 82 DLLTMEEAVHAKLRKFGLPGHNHLT------------PIANLSGGQKVRVMF--TLVSMY 127
L + KL G GH P+ LSGG+ RV+ L+S
Sbjct: 97 RNLPITVRRFMKLAPRGRRGHWAEAVADAGVSQLLDRPMQGLSGGELRRVLLARALLSRP 156
Query: 128 HLDTQSIVAVAV--------------TLDEFAGGVVLVSHDSRLI 158
HL A + D + GV++VSHD L+
Sbjct: 157 HLLALDEPAAGLDQRGQGELYRLIRHVRDRYGCGVLVVSHDLNLV 201
>sp|Q47JR8|MSBA_DECAR Lipid A export ATP-binding/permease protein MsbA OS=Dechloromonas
aromatica (strain RCB) GN=msbA PE=3 SV=1
Length = 585
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 21 ISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLL 63
++F+YP + L +V + + G CVA+VGP+ +GK+ NLL
Sbjct: 346 VTFTYPGSERPALDSVSLTVRPGECVALVGPSGSGKTTAANLL 388
>sp|P39115|EXPZ_BACSU Nucleotide-binding protein ExpZ OS=Bacillus subtilis (strain 168)
GN=expZ PE=3 SV=2
Length = 547
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 34/156 (21%)
Query: 33 LSNVDMGIDMGTCVAIVGPNDTGKSPLPNLL--------AVRRRQKLRIGRHSRHLEDL- 83
N + I G VAI+GPN +GK+ L N++ +V IG ++ + DL
Sbjct: 307 FKNANFTIQHGEKVAIIGPNGSGKTTLLNIILGQETAEGSVWVSPSANIGYLTQEVFDLP 366
Query: 84 -------LTMEEAVHAK------LRKFGLPGHNHLTPIANLSGGQKVRVMFTLVSMY--- 127
L E A+ +R G PI ++S G++V++ +
Sbjct: 367 LEQTPEELFENETFKARGHVQNLMRHLGFTAAQWTEPIKHMSMGERVKIKLMAYILEEKD 426
Query: 128 ---------HLDTQSIVAVAVTLDEFAGGVVLVSHD 154
HLD S + TL +++G ++ VSHD
Sbjct: 427 VLILDEPTNHLDLPSREQLEETLSQYSGTLLAVSHD 462
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 26/163 (15%)
Query: 14 MLQLIEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPLPNLL---------- 63
M +++ + + SY +V+ + G + I+G N GKS L +L+
Sbjct: 1 MKEIVTLTNVSYEVKDQTVFKHVNASVQQGDIIGIIGKNGAGKSTLLHLIHNDLAPAQGQ 60
Query: 64 AVRRRQKLRIGRHSRHLEDLLTMEEAVHAKLRKFGLPGHNHLTPIANLSGGQKVR----- 118
+R+ KL + A L K+ +P L LSGG+K++
Sbjct: 61 ILRKDIKLALVEQETAAYSFADQTPAEKKLLEKWHVP----LRDFHQLSGGEKLKARLAK 116
Query: 119 -------VMFTLVSMYHLDTQSIVAVAVTLDEFAGGVVLVSHD 154
++ HLD +S+ + L + G V+LVSHD
Sbjct: 117 GLSEDADLLLLDEPTNHLDEKSLQFLIQQLKHYNGTVILVSHD 159
>sp|Q8T9W1|TAGD_DICDI Serine protease/ABC transporter B family protein tagD
OS=Dictyostelium discoideum GN=tagD PE=3 SV=1
Length = 1825
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 21 ISFSYPNLQDIR-LSNVDMGIDMGTCVAIVGPNDTGKSPLPNLLA 64
+SF YP+ D+ L N+D+ + G C +VGP+ +GKS L L++
Sbjct: 1581 VSFCYPSRADVGVLYNIDLKFESGKCYGLVGPSGSGKSTLLELIS 1625
>sp|Q3Z2L6|ZNUC_SHISS Zinc import ATP-binding protein ZnuC OS=Shigella sonnei (strain
Ss046) GN=znuC PE=3 SV=1
Length = 251
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 74/188 (39%), Gaps = 57/188 (30%)
Query: 18 IEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPL---------PNLLAVRRR 68
+E +S S+ Q LS+V + + G + ++GPN GKS L P+ ++R
Sbjct: 7 LENVSVSFG--QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGVIKRN 64
Query: 69 QKLRIG----------------------RHSRHLEDLLTMEEAVHAKLRKFGLPGHNHLT 106
KLRIG R H ED+L + V A GH
Sbjct: 65 GKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQA--------GHLINA 116
Query: 107 PIANLSGGQKVRVMFTLVSMYH------------LDTQSIVAVAVTLD----EFAGGVVL 150
P+ LSGG+ RV+ + +D VA+ +D E GV++
Sbjct: 117 PMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLM 176
Query: 151 VSHDSRLI 158
VSHD L+
Sbjct: 177 VSHDLHLV 184
>sp|Q322E8|ZNUC_SHIBS Zinc import ATP-binding protein ZnuC OS=Shigella boydii serotype 4
(strain Sb227) GN=znuC PE=3 SV=1
Length = 251
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 74/188 (39%), Gaps = 57/188 (30%)
Query: 18 IEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPL---------PNLLAVRRR 68
+E +S S+ Q LS+V + + G + ++GPN GKS L P+ ++R
Sbjct: 7 LENVSVSFG--QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGVIKRN 64
Query: 69 QKLRIG----------------------RHSRHLEDLLTMEEAVHAKLRKFGLPGHNHLT 106
KLRIG R H ED+L + V A GH
Sbjct: 65 GKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQA--------GHLINA 116
Query: 107 PIANLSGGQKVRVMFTLVSMYH------------LDTQSIVAVAVTLD----EFAGGVVL 150
P+ LSGG+ RV+ + +D VA+ +D E GV++
Sbjct: 117 PMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLM 176
Query: 151 VSHDSRLI 158
VSHD L+
Sbjct: 177 VSHDLHLV 184
>sp|Q1RAS6|ZNUC_ECOUT Zinc import ATP-binding protein ZnuC OS=Escherichia coli (strain
UTI89 / UPEC) GN=znuC PE=3 SV=1
Length = 251
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 74/188 (39%), Gaps = 57/188 (30%)
Query: 18 IEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPL---------PNLLAVRRR 68
+E +S S+ Q LS+V + + G + ++GPN GKS L P+ ++R
Sbjct: 7 LENVSVSFG--QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGVIKRN 64
Query: 69 QKLRIG----------------------RHSRHLEDLLTMEEAVHAKLRKFGLPGHNHLT 106
KLRIG R H ED+L + V A GH
Sbjct: 65 GKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQA--------GHLINA 116
Query: 107 PIANLSGGQKVRVMFTLVSMYH------------LDTQSIVAVAVTLD----EFAGGVVL 150
P+ LSGG+ RV+ + +D VA+ +D E GV++
Sbjct: 117 PMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLM 176
Query: 151 VSHDSRLI 158
VSHD L+
Sbjct: 177 VSHDLHLV 184
>sp|P0A9X1|ZNUC_ECOLI Zinc import ATP-binding protein ZnuC OS=Escherichia coli (strain
K12) GN=znuC PE=1 SV=1
Length = 251
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 74/188 (39%), Gaps = 57/188 (30%)
Query: 18 IEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPL---------PNLLAVRRR 68
+E +S S+ Q LS+V + + G + ++GPN GKS L P+ ++R
Sbjct: 7 LENVSVSFG--QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGVIKRN 64
Query: 69 QKLRIG----------------------RHSRHLEDLLTMEEAVHAKLRKFGLPGHNHLT 106
KLRIG R H ED+L + V A GH
Sbjct: 65 GKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQA--------GHLINA 116
Query: 107 PIANLSGGQKVRVMFTLVSMYH------------LDTQSIVAVAVTLD----EFAGGVVL 150
P+ LSGG+ RV+ + +D VA+ +D E GV++
Sbjct: 117 PMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLM 176
Query: 151 VSHDSRLI 158
VSHD L+
Sbjct: 177 VSHDLHLV 184
>sp|P0A9X2|ZNUC_ECOL6 Zinc import ATP-binding protein ZnuC OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=znuC PE=3 SV=1
Length = 251
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 74/188 (39%), Gaps = 57/188 (30%)
Query: 18 IEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPL---------PNLLAVRRR 68
+E +S S+ Q LS+V + + G + ++GPN GKS L P+ ++R
Sbjct: 7 LENVSVSFG--QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGVIKRN 64
Query: 69 QKLRIG----------------------RHSRHLEDLLTMEEAVHAKLRKFGLPGHNHLT 106
KLRIG R H ED+L + V A GH
Sbjct: 65 GKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQA--------GHLINA 116
Query: 107 PIANLSGGQKVRVMFTLVSMYH------------LDTQSIVAVAVTLD----EFAGGVVL 150
P+ LSGG+ RV+ + +D VA+ +D E GV++
Sbjct: 117 PMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLM 176
Query: 151 VSHDSRLI 158
VSHD L+
Sbjct: 177 VSHDLHLV 184
>sp|Q0TGX4|ZNUC_ECOL5 Zinc import ATP-binding protein ZnuC OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=znuC PE=3 SV=1
Length = 251
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 74/188 (39%), Gaps = 57/188 (30%)
Query: 18 IEVISFSYPNLQDIRLSNVDMGIDMGTCVAIVGPNDTGKSPL---------PNLLAVRRR 68
+E +S S+ Q LS+V + + G + ++GPN GKS L P+ ++R
Sbjct: 7 LENVSVSFG--QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGVIKRN 64
Query: 69 QKLRIG----------------------RHSRHLEDLLTMEEAVHAKLRKFGLPGHNHLT 106
KLRIG R H ED+L + V A GH
Sbjct: 65 GKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQA--------GHLINA 116
Query: 107 PIANLSGGQKVRVMFTLVSMYH------------LDTQSIVAVAVTLD----EFAGGVVL 150
P+ LSGG+ RV+ + +D VA+ +D E GV++
Sbjct: 117 PMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLM 176
Query: 151 VSHDSRLI 158
VSHD L+
Sbjct: 177 VSHDLHLV 184
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,387,214
Number of Sequences: 539616
Number of extensions: 2294380
Number of successful extensions: 11920
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 340
Number of HSP's that attempted gapping in prelim test: 11122
Number of HSP's gapped (non-prelim): 1015
length of query: 158
length of database: 191,569,459
effective HSP length: 108
effective length of query: 50
effective length of database: 133,290,931
effective search space: 6664546550
effective search space used: 6664546550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)