BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044539
(217 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 180 LRVLDLGSLVLIRYPSEV--ENLFLLRYLNLNIPSLKSL 216
LR LDLG L + Y SE E L LRYLNL + +LK +
Sbjct: 133 LRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDI 171
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 180 LRVLDLGSLVLIRYPSEV--ENLFLLRYLNLNIPSLKSL 216
LR LDLG L + Y SE E L LRYLNL + +LK +
Sbjct: 133 LRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDI 171
>pdb|2X8Y|A Chain A, Crystal Structure Of Ance
pdb|2X8Z|A Chain A, Crystal Structure Of Ance-Captopril Complex
pdb|2X90|A Chain A, Crystal Structure Of Ance-Enalaprilat Complex
pdb|2X91|A Chain A, Crystal Structure Of Ance-Lisinopril Complex
pdb|2X96|A Chain A, Crystal Structure Of Ance-Rxpa380 Complex
pdb|2X97|A Chain A, Crystal Structure Of Ance-Rxp407 Complex
pdb|2XHM|A Chain A, Crystal Structure Of Ance-K26 Complex
pdb|3ZQZ|A Chain A, Crystal Structure Of Ance In Complex With A Selenium
Analogue Of Captopril
pdb|4AA1|A Chain A, Crystal Structure Of Ance In Complex With Angiotensin-Ii
pdb|4AA2|A Chain A, Crystal Structure Of Ance In Complex With Bradykinin
Potentiating Peptide B
pdb|4ASQ|A Chain A, Crystal Structure Of Ance In Complex With Bradykinin
pdb|4ASR|A Chain A, Crystal Structure Of Ance In Complex With Thr6-Bradykinin
Length = 598
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 1 ISLKENIKEVLDELRGLQVVAYCMLHFYLKLCCLYLSVFLVYFEISTK 48
++L I+EV+ + R + +AY FY K S F Y E++TK
Sbjct: 127 LALDPEIEEVISKSRDHEELAYYWREFYDKAGTAVRSQFERYVELNTK 174
>pdb|2X92|A Chain A, Crystal Structure Of Ance-Ramiprilat Complex
pdb|2X93|A Chain A, Crystal Structure Of Ance-Trandolaprilat Complex
pdb|2X94|A Chain A, Crystal Structure Of Ance-Perindoprilat Complex
pdb|2X95|A Chain A, Crystal Structure Of Ance-Lisinopril-Tryptophan Analogue,
Lisw-S Complex
Length = 599
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 1 ISLKENIKEVLDELRGLQVVAYCMLHFYLKLCCLYLSVFLVYFEISTK 48
++L I+EV+ + R + +AY FY K S F Y E++TK
Sbjct: 127 LALDPEIEEVISKSRDHEELAYYWREFYDKAGTAVRSQFERYVELNTK 174
>pdb|1J36|A Chain A, Crystal Structure Of Drosophila Ance
pdb|1J36|B Chain B, Crystal Structure Of Drosophila Ance
pdb|1J37|A Chain A, Crystal Structure Of Drosophila Ance
pdb|1J37|B Chain B, Crystal Structure Of Drosophila Ance
pdb|1J38|A Chain A, Crystal Structure Of Drosophila Ance
pdb|1J38|B Chain B, Crystal Structure Of Drosophila Ance
Length = 607
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 1 ISLKENIKEVLDELRGLQVVAYCMLHFYLKLCCLYLSVFLVYFEISTK 48
++L I+EV+ + R + +AY FY K S F Y E++TK
Sbjct: 130 LALDPEIEEVISKSRDHEELAYYWREFYDKAGTAVRSQFERYVELNTK 177
>pdb|4G6V|B Chain B, Cdia-CtCDII TOXIN AND IMMUNITY COMPLEX FROM BURKHOLDERIA
PSEUDOMALLEI
pdb|4G6V|D Chain D, Cdia-CtCDII TOXIN AND IMMUNITY COMPLEX FROM BURKHOLDERIA
PSEUDOMALLEI
pdb|4G6V|F Chain F, Cdia-CtCDII TOXIN AND IMMUNITY COMPLEX FROM BURKHOLDERIA
PSEUDOMALLEI
pdb|4G6V|H Chain H, Cdia-CtCDII TOXIN AND IMMUNITY COMPLEX FROM BURKHOLDERIA
PSEUDOMALLEI
Length = 111
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 110 FEGEFVISPIMDQEVKLRE 128
FEG+F+ISP+ D + L+E
Sbjct: 31 FEGKFLISPVRDADFSLKE 49
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 26.6 bits (57), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 183 LDLGSLVLIRYPSE--VENLFLLRYLNLNIPSLKSL 216
LDLG L + Y SE E LF L+YLNL + ++K +
Sbjct: 176 LDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.144 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,556,367
Number of Sequences: 62578
Number of extensions: 201134
Number of successful extensions: 626
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 620
Number of HSP's gapped (non-prelim): 7
length of query: 217
length of database: 14,973,337
effective HSP length: 95
effective length of query: 122
effective length of database: 9,028,427
effective search space: 1101468094
effective search space used: 1101468094
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 49 (23.5 bits)