Your job contains 1 sequence.
>044541
MFLASLTALCFVPATDDDDNSDSDEDKMDIRLVSNGKPELQAKPLSEKPIAVEPSASTAK
QNKKDVKPKLKADGSDSDDSDLNTSSSDDDETSDDENPNLVNRDGSSDESSGELDESDDD
EDDEGTDESESDDEDEETPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHI
ATPHPSKKSAKTPANNDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGAPA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044541
(237 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2144623 - symbol:HD2C "AT5G03740" species:3702... 282 9.7e-25 1
TAIR|locus:2162479 - symbol:HD2B "histone deacetylase 2B"... 180 1.1e-15 2
TAIR|locus:2101655 - symbol:HDA3 "histone deacetylase 3" ... 109 0.00011 1
ZFIN|ZDB-GENE-050306-52 - symbol:zgc:113098 "zgc:113098" ... 109 0.00029 1
>TAIR|locus:2144623 [details] [associations]
symbol:HD2C "AT5G03740" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009414
"response to water deprivation" evidence=IMP] [GO:0009651 "response
to salt stress" evidence=IMP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0007275 GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0005730 GO:GO:0046872 GO:GO:0009651
GO:GO:0009414 GO:GO:0008270 GO:GO:0006351 GO:GO:0016568
EMBL:AB005235 GO:GO:0016787 EMBL:AL162506 HOGENOM:HOG000029063
EMBL:AF255712 EMBL:AF510168 EMBL:AF372889 EMBL:AY142039
IPI:IPI00521512 PIR:T48401 RefSeq:NP_195994.3 UniGene:At.16830
UniGene:At.4771 ProteinModelPortal:Q9LZR5 IntAct:Q9LZR5
STRING:Q9LZR5 PaxDb:Q9LZR5 PRIDE:Q9LZR5 ProMEX:Q9LZR5
EnsemblPlants:AT5G03740.1 GeneID:831733 KEGG:ath:AT5G03740
GeneFarm:5066 TAIR:At5g03740 eggNOG:NOG317827 InParanoid:Q9LZR5
OMA:TKAKHSA PhylomeDB:Q9LZR5 ProtClustDB:CLSN2914130
Genevestigator:Q9LZR5 GermOnline:AT5G03740 Uniprot:Q9LZR5
Length = 294
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 60/105 (57%), Positives = 72/105 (68%)
Query: 138 TPKKAESSKKRPVE-SASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANN 196
TPKK E KKR E ++SK +KKAKFVTPQKT+ KK H+ATPHPSK++ K
Sbjct: 190 TPKKPEEPKKRSAEPNSSKNPASNKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGG 249
Query: 197 D--QT--KQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGAPA 237
+T +QQ KS G+F CKSC R+FT+E GLQSHTKAKH A A
Sbjct: 250 STGETSKQQQTPKSAGAFGCKSCTRTFTSEMGLQSHTKAKHSAAA 294
>TAIR|locus:2162479 [details] [associations]
symbol:HD2B "histone deacetylase 2B" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA;TAS] [GO:0005618
"cell wall" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=IMP] [GO:0009294 "DNA mediated
transformation" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0001510 "RNA methylation" evidence=RCA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=RCA] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0005739 "mitochondrion" evidence=IDA]
GO:GO:0005829 GO:GO:0005739 GO:GO:0005774 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0045892 GO:GO:0005730
GO:GO:0006351 EMBL:AB006699 GO:GO:0009944 GO:GO:0009294
GO:GO:0004407 eggNOG:NOG246620 HOGENOM:HOG000029063 EMBL:AF195546
EMBL:AF044914 EMBL:AY059893 EMBL:AY079014 EMBL:AY122890
EMBL:AK222066 IPI:IPI00530883 IPI:IPI00651116 PIR:T52287
RefSeq:NP_197657.3 RefSeq:NP_851056.1 UniGene:At.8423
ProteinModelPortal:Q56WH4 STRING:Q56WH4 PaxDb:Q56WH4 PRIDE:Q56WH4
EnsemblPlants:AT5G22650.1 GeneID:832328 KEGG:ath:AT5G22650
GeneFarm:5065 TAIR:At5g22650 InParanoid:Q56WH4 OMA:FAESEHS
PhylomeDB:Q56WH4 ProtClustDB:CLSN2680176 Genevestigator:Q56WH4
Uniprot:Q56WH4
Length = 306
Score = 180 (68.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 44/79 (55%), Positives = 50/79 (63%)
Query: 138 TPKKAES-SKKRPVESASKTYVPDKKAKFV-----TPQKTEEKKGVSHIATPHPSKKSAK 191
TPKK E +KKRP ES SKT V KKAK TPQKTEEKK H ATPHP+KK K
Sbjct: 199 TPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGK 258
Query: 192 TPANNDQT-KQQPHKSGGS 209
+P N +Q+ K SGG+
Sbjct: 259 SPVNANQSPKSGGQSSGGN 277
Score = 35 (17.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 37 KPELQAKPLSEKPIAVEPSASTAKQNKKD 65
KP + KP EKP + E S + ++
Sbjct: 141 KPA-EVKPAEEKPESDEEDESDDEDESEE 168
>TAIR|locus:2101655 [details] [associations]
symbol:HDA3 "histone deacetylase 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA;TAS] [GO:0009944
"polarity specification of adaxial/abaxial axis" evidence=IMP]
[GO:0009294 "DNA mediated transformation" evidence=IMP] [GO:0000478
"endonucleolytic cleavage involved in rRNA processing"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006164 "purine nucleotide biosynthetic process" evidence=RCA]
[GO:0009220 "pyrimidine ribonucleotide biosynthetic process"
evidence=RCA] InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016787
EMBL:AC002534 GO:GO:0009944 GO:GO:0009294 EMBL:AF195545
EMBL:AY065396 EMBL:AY096729 IPI:IPI00534075 RefSeq:NP_566872.1
UniGene:At.20950 ProteinModelPortal:Q9FVE6 STRING:Q9FVE6
PaxDb:Q9FVE6 PRIDE:Q9FVE6 EnsemblPlants:AT3G44750.1 GeneID:823605
KEGG:ath:AT3G44750 GeneFarm:5064 TAIR:At3g44750 eggNOG:NOG246620
HOGENOM:HOG000029063 InParanoid:Q9FVE6 OMA:GGSVPCK PhylomeDB:Q9FVE6
ProtClustDB:CLSN2917372 Genevestigator:Q9FVE6 GermOnline:AT3G44750
Uniprot:Q9FVE6
Length = 245
Score = 109 (43.4 bits), Expect = 0.00011, P = 0.00011
Identities = 28/53 (52%), Positives = 30/53 (56%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKF-VTPQKTEEKKGVSHIATPHPSKKS 189
TPKK SSKKR E+ K V KKAK VTPQKT+EKK A P S
Sbjct: 164 TPKKPASSKKRANETTPKAPVSAKKAKVAVTPQKTDEKKKGGKAANQSPKSAS 216
Score = 107 (42.7 bits), Expect = 0.00020, P = 0.00020
Identities = 31/87 (35%), Positives = 42/87 (48%)
Query: 160 DKKAKFVTPQKTEEKKGVSHIATPH-P-SKKSAK---TPANNDQTKQ------QPHKSGG 208
D + + TP+K K ++ TP P S K AK TP D+ K+ Q KS
Sbjct: 157 DSEEEEPTPKKPASSKKRANETTPKAPVSAKKAKVAVTPQKTDEKKKGGKAANQSPKSAS 216
Query: 209 SFPCKSCNRSFTTEGGLQSHTKAKHGA 235
C SC ++F + L+SH KAKH A
Sbjct: 217 QVSCGSCKKTFNSGNALESHNKAKHAA 243
>ZFIN|ZDB-GENE-050306-52 [details] [associations]
symbol:zgc:113098 "zgc:113098" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
ZFIN:ZDB-GENE-050306-52 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
eggNOG:COG5048 Gene3D:3.30.160.60 HOVERGEN:HBG018163
HOGENOM:HOG000234617 EMBL:BC090731 IPI:IPI00555389
RefSeq:NP_001013364.1 UniGene:Dr.88682 ProteinModelPortal:Q5CZS4
GeneID:503768 KEGG:dre:503768 InParanoid:Q5CZS4 NextBio:20866312
Uniprot:Q5CZS4
Length = 406
Score = 109 (43.4 bits), Expect = 0.00029, P = 0.00029
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 139 PKKAESSKKRPVESASK-TYVPDKKAKFVTPQKTEEK-KGVSHIA--TPHPSKKSAKTPA 194
P++ E + + E + T + + K + P K EE + SH+ T S S++T
Sbjct: 24 PERTEETFRVKHEDPEQLTELIEPKEETEVPNKLEENDQYTSHLDFNTEEQSLSSSETEQ 83
Query: 195 NNDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHG 234
+ Q + Q +K SF C+ C RSF+ G L+ H + G
Sbjct: 84 TSSQKRAQKNKGANSFTCQECGRSFSQSGTLKVHMRIHTG 123
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.306 0.122 0.343 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 237 166 0.00097 107 3 11 23 0.37 33
30 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 536 (57 KB)
Total size of DFA: 129 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.33u 0.10s 19.43t Elapsed: 00:00:01
Total cpu time: 19.33u 0.10s 19.43t Elapsed: 00:00:01
Start: Mon May 20 16:22:41 2013 End: Mon May 20 16:22:42 2013