BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044541
(237 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225440996|ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
Length = 307
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/102 (70%), Positives = 82/102 (80%), Gaps = 2/102 (1%)
Query: 136 EETPKKAESSKKRPVESASKTYVPDKKAKFVTPQKT--EEKKGVSHIATPHPSKKSAKTP 193
+ETPKKA SKKRP ES SKT VPDKKAKFVTPQKT ++KK H+ATP+PSK++ KTP
Sbjct: 204 KETPKKAGPSKKRPTESVSKTPVPDKKAKFVTPQKTGDDDKKSGGHVATPYPSKQAGKTP 263
Query: 194 ANNDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
AN ++ KQQ KSGGSF CKSCNRSF +E LQSHTKAKH A
Sbjct: 264 ANTEKPKQQVQKSGGSFSCKSCNRSFNSENALQSHTKAKHTA 305
>gi|297740059|emb|CBI30241.3| unnamed protein product [Vitis vinifera]
Length = 149
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/107 (67%), Positives = 83/107 (77%), Gaps = 5/107 (4%)
Query: 134 EDEETPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTE-----EKKGVSHIATPHPSKK 188
+ +ETPKKA SKKRP ES SKT VPDKKAKFVTPQKT+ +KK H+ATP+PSK+
Sbjct: 41 KKKETPKKAGPSKKRPTESVSKTPVPDKKAKFVTPQKTDGKKSDDKKSGGHVATPYPSKQ 100
Query: 189 SAKTPANNDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
+ KTPAN ++ KQQ KSGGSF CKSCNRSF +E LQSHTKAKH A
Sbjct: 101 AGKTPANTEKPKQQVQKSGGSFSCKSCNRSFNSENALQSHTKAKHTA 147
>gi|449440191|ref|XP_004137868.1| PREDICTED: uncharacterized protein LOC101207572 [Cucumis sativus]
gi|449500996|ref|XP_004161249.1| PREDICTED: uncharacterized protein LOC101226213 [Cucumis sativus]
Length = 318
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 81/100 (81%), Gaps = 1/100 (1%)
Query: 137 ETPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANN 196
+TPKKAE+SKKRP++SA+KT PDKKAK VTPQKT+ KKGV+H+ATPHPSKK+ K A N
Sbjct: 217 QTPKKAEASKKRPLDSANKTPAPDKKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAAN 276
Query: 197 DQTKQQ-PHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
D+ KQQ P + +F CK+CNR+F +E LQSHTKAKH A
Sbjct: 277 DKNKQQTPKSANAAFSCKTCNRTFGSETALQSHTKAKHTA 316
>gi|255575359|ref|XP_002528582.1| Histone deacetylase 2a, putative [Ricinus communis]
gi|223531978|gb|EEF33790.1| Histone deacetylase 2a, putative [Ricinus communis]
Length = 287
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 72/98 (73%), Gaps = 3/98 (3%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANND 197
TPK E KKRP ESA KT +PDKK K VTPQKT+ KK H+ATPHPSKK KTPA++D
Sbjct: 192 TPKTIEKGKKRPAESAKKTPLPDKKVKLVTPQKTDGKKASGHVATPHPSKKILKTPASSD 251
Query: 198 QTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
Q K+Q K SFPC SCNR+F +E LQSH+KAKH A
Sbjct: 252 QKKEQTQK---SFPCTSCNRAFGSEAALQSHSKAKHSA 286
>gi|118484193|gb|ABK93977.1| unknown [Populus trichocarpa]
Length = 305
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 76/101 (75%), Gaps = 4/101 (3%)
Query: 135 DEETPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPA 194
D +TPKKAE KKR ESASK VPDKKAKFVTPQKT+ KK HIATPHPSK++AKT A
Sbjct: 208 DVKTPKKAEVGKKRSAESASKNPVPDKKAKFVTPQKTDLKKAGVHIATPHPSKQAAKTSA 267
Query: 195 NNDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
N+ Q K+Q K SF C SCNRSF +E LQSH+KAKH A
Sbjct: 268 NS-QRKEQAQK---SFSCNSCNRSFGSENALQSHSKAKHSA 304
>gi|359479465|ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
Length = 300
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 74/96 (77%)
Query: 140 KKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANNDQT 199
KK E KKRP ESA+KT VP KKAK V+PQKT+ KKG +H ATPHP+KK+ KTPA+ D+
Sbjct: 204 KKVEPGKKRPTESATKTPVPAKKAKLVSPQKTDGKKGGAHTATPHPNKKAGKTPASGDKG 263
Query: 200 KQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
K Q KSGG CKSC+++F +E LQSH+KAKHGA
Sbjct: 264 KGQSPKSGGQVSCKSCSKTFNSENALQSHSKAKHGA 299
>gi|297734854|emb|CBI17088.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 74/96 (77%)
Query: 140 KKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANNDQT 199
KK E KKRP ESA+KT VP KKAK V+PQKT+ KKG +H ATPHP+KK+ KTPA+ D+
Sbjct: 257 KKVEPGKKRPTESATKTPVPAKKAKLVSPQKTDGKKGGAHTATPHPNKKAGKTPASGDKG 316
Query: 200 KQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
K Q KSGG CKSC+++F +E LQSH+KAKHGA
Sbjct: 317 KGQSPKSGGQVSCKSCSKTFNSENALQSHSKAKHGA 352
>gi|269969916|gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
Length = 282
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 74/96 (77%), Gaps = 3/96 (3%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANND 197
TPKKAE SKKRP +SA KT PDKKAKF TPQKT+ KKG H+ATPHPSK++ KT N
Sbjct: 186 TPKKAEPSKKRPSDSAIKTPAPDKKAKFATPQKTDGKKGAVHVATPHPSKQAGKTSGN-- 243
Query: 198 QTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKH 233
++ Q P KSGGS CK+C+R+F +E L+SH+KAKH
Sbjct: 244 KSNQTP-KSGGSLACKTCSRTFGSETALESHSKAKH 278
>gi|242091631|ref|XP_002441648.1| hypothetical protein SORBIDRAFT_09g030950 [Sorghum bicolor]
gi|241946933|gb|EES20078.1| hypothetical protein SORBIDRAFT_09g030950 [Sorghum bicolor]
Length = 307
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 79/105 (75%), Gaps = 2/105 (1%)
Query: 133 DEDEETPKKAESSKKRPVESASKTYVPDKKAKFVTP--QKTEEKKGVSHIATPHPSKKSA 190
+E+ TPKK E+ KKR E+A KT + DKK K TP QKT KKG +H+ATP+P+K++
Sbjct: 202 EEETPTPKKPEAGKKRAAENALKTLLSDKKVKVATPSAQKTGGKKGATHVATPYPAKRAG 261
Query: 191 KTPANNDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
KTPANND++K++ +SG S PCKSC+++F +E LQ+H+KAKH A
Sbjct: 262 KTPANNDKSKERSPRSGRSVPCKSCSKTFNSEMALQAHSKAKHRA 306
>gi|224069776|ref|XP_002326411.1| histone deacetylase [Populus trichocarpa]
gi|222833604|gb|EEE72081.1| histone deacetylase [Populus trichocarpa]
Length = 271
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/95 (66%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
Query: 141 KAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANNDQTK 200
+AE KKR ESASK VPDKKAKFVTPQKT+ KK HIATPHPSK++AKT AN+ Q K
Sbjct: 180 QAEVGKKRSAESASKNPVPDKKAKFVTPQKTDLKKAGVHIATPHPSKQAAKTSANS-QRK 238
Query: 201 QQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
+Q K SF C SCNRSF +E LQSH+KAKH A
Sbjct: 239 EQAQK---SFSCNSCNRSFGSENALQSHSKAKHSA 270
>gi|194694834|gb|ACF81501.1| unknown [Zea mays]
gi|413950328|gb|AFW82977.1| histone deacetylase HDT2 [Zea mays]
Length = 303
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 76/100 (76%), Gaps = 4/100 (4%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKFVTP--QKTEEKKGVSHIATPHPSKKSAKTPAN 195
TPKK E+ KKR E+A KT + DKKAK TP QKT KKG +H+ATPHP+K KTPAN
Sbjct: 205 TPKKPEAGKKRGAENALKTPLSDKKAKVATPPAQKTGGKKGATHVATPHPAK--GKTPAN 262
Query: 196 NDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
ND++ ++ KSGGS PCKSC+++F +E LQ+H+KAKHGA
Sbjct: 263 NDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKHGA 302
>gi|269969912|gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
Length = 295
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 121/208 (58%), Gaps = 29/208 (13%)
Query: 28 MDIRLVSNGKPELQAKPLSEKPIAVEPSASTAKQNKKDVKPKLKADGSDSDDSDLNTSSS 87
+ + + +NGKPE + K +EK + SAS KQ K V+P
Sbjct: 115 IPLTIANNGKPEAKVKE-AEKSNVAKDSAS-GKQKVKIVEP------------------- 153
Query: 88 DDDETSDDENPNLVNRDGSSDESSGELDESDDDEDDEGTDESESDDEDEETPKKAESSKK 147
S D + + DE S + D + +DE + ESD+ +EETPKKAE KK
Sbjct: 154 -----SKDAKADDEDESTDEDEMSEDEDSDMGEGEDESDGDDESDEGEEETPKKAEPGKK 208
Query: 148 RPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANNDQTKQQPHKSG 207
R +SA+KT VPDKKAKFVTPQKT+ KKG H+ATPHPSK++ K+PAN +Q Q P KSG
Sbjct: 209 RKADSATKTPVPDKKAKFVTPQKTDGKKGSGHVATPHPSKQAGKSPANKNQ--QTP-KSG 265
Query: 208 GSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
G+ CK+CNR F +E L+ H+KAKH A
Sbjct: 266 GAHLCKTCNRGFGSENALEFHSKAKHSA 293
>gi|162463122|ref|NP_001105631.1| histone deacetylase HDT2 [Zea mays]
gi|73919941|sp|Q9M4U5.1|HDT2_MAIZE RecName: Full=Histone deacetylase HDT2; AltName: Full=Histone
deacetylase 2b; Short=HD2b; AltName: Full=Zm-HD2b
gi|7716948|gb|AAF68624.1|AF254072_1 histone deacetylase 2 isoform b [Zea mays]
Length = 303
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 75/100 (75%), Gaps = 4/100 (4%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKFVTP--QKTEEKKGVSHIATPHPSKKSAKTPAN 195
TPKK E+ KKR E+A KT + DKKAK TP QKT KKG +H+ATPHP+K KTPAN
Sbjct: 205 TPKKPEAGKKRGAENALKTPLSDKKAKVATPPAQKTGGKKGATHVATPHPAK--GKTPAN 262
Query: 196 NDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
ND+ ++ KSGGS PCKSC+++F +E LQ+H+KAKHGA
Sbjct: 263 NDKLTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKHGA 302
>gi|296085595|emb|CBI29370.3| unnamed protein product [Vitis vinifera]
Length = 110
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 68/90 (75%)
Query: 146 KKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANNDQTKQQPHK 205
KKRP ESA+KT VP KKAK V+PQ T+ KKG +H ATPHP+KK+ KTPA D+ K+Q K
Sbjct: 20 KKRPTESATKTPVPAKKAKLVSPQNTDGKKGGAHTATPHPNKKAGKTPATGDKGKEQSPK 79
Query: 206 SGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
SGG CKSC+++F +E LQSH+K KHG
Sbjct: 80 SGGQVSCKSCSKTFNSENALQSHSKTKHGV 109
>gi|359807277|ref|NP_001240859.1| uncharacterized protein LOC100812152 [Glycine max]
gi|255638252|gb|ACU19439.1| unknown [Glycine max]
Length = 288
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 69/96 (71%), Gaps = 4/96 (4%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANND 197
TPKK E+S KR ++S+ KT VP KK KFVTPQKT+ K V H+ATPHPSK++ K ANN
Sbjct: 194 TPKKIEASNKRGIDSSKKTPVPVKKTKFVTPQKTDS-KNVVHVATPHPSKQTGKATANN- 251
Query: 198 QTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKH 233
KQQ KSGG + CK CNRSF TE L SH KAKH
Sbjct: 252 --KQQTPKSGGDYSCKPCNRSFKTEDALSSHNKAKH 285
>gi|242091217|ref|XP_002441441.1| hypothetical protein SORBIDRAFT_09g026730 [Sorghum bicolor]
gi|241946726|gb|EES19871.1| hypothetical protein SORBIDRAFT_09g026730 [Sorghum bicolor]
Length = 299
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 73/98 (74%), Gaps = 5/98 (5%)
Query: 140 KKAESSKKRPVESASKTYVPDKKAKFVTP--QKTEEKKGVSHIATPHPSKKSAKTPANND 197
KK E+ KKRP E+ S T + DKKAK TP QKT KKG H+ATPHP+K KTPANND
Sbjct: 204 KKPEAGKKRPAEN-SLTPLSDKKAKVATPSAQKTGGKKGAVHVATPHPAK--GKTPANND 260
Query: 198 QTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
++K++ KSGGS PCKSC ++F +E LQ+H+KAKHGA
Sbjct: 261 KSKEKSPKSGGSVPCKSCTKTFNSEMALQAHSKAKHGA 298
>gi|388519255|gb|AFK47689.1| unknown [Lotus japonicus]
Length = 315
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 133/209 (63%), Gaps = 21/209 (10%)
Query: 33 VSNGKPELQAKPLSEKPIAVEPSASTAKQNKKDVKPKL----KADGSDSDDSDLNTSSSD 88
VSNGKPE++ K + +P+A+ AKQ +K K K + ++D + ++S SD
Sbjct: 120 VSNGKPEIEVKN------SAKPNANEAKQKEKITDLKKNENNKGKAAIAEDEE-DSSGSD 172
Query: 89 DDETSDDE-NPNLVNRDGSSDESSGELDESDDDEDDEGTDESESDDEDEETPKKAESSKK 147
D TS+DE PN +SS + D+SDDD+D++ ++ + DD+DEETPKKAE SKK
Sbjct: 173 TDNTSEDEPMPN------GGVDSSEDDDDSDDDDDEDDDEDEDDDDDDEETPKKAEGSKK 226
Query: 148 RPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANNDQ-TKQQPHKS 206
R ++S T VP KKAKFVTPQKT+ K V+H+ATP+P K++ K A+ Q K Q KS
Sbjct: 227 RVLDSPKNTPVPVKKAKFVTPQKTDSK-NVAHVATPYP-KQAGKASASTKQPAKPQTPKS 284
Query: 207 GGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
GG + CK CNRSF TE L SH KAKH A
Sbjct: 285 GGEYSCKPCNRSFKTEDALGSHNKAKHSA 313
>gi|269969914|gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]
Length = 294
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 122/208 (58%), Gaps = 30/208 (14%)
Query: 28 MDIRLVSNGKPELQAKPLSEKPIAVEPSASTAKQNKKDVKPKLKADGSDSDDSDLNTSSS 87
+ + + +NGKPE + K +EK A + SAS KQ K V+P
Sbjct: 115 IPLTIANNGKPEAKVKE-AEKSNAAKDSAS-GKQKVKIVEP------------------- 153
Query: 88 DDDETSDDENPNLVNRDGSSDESSGELDESDDDEDDEGTDESESDDEDEETPKKAESSKK 147
S D + + DE S + D + +DE ++ ESD+ +EETPKKAE KK
Sbjct: 154 -----SKDAKADDEDESTDEDEMSEDEDSDVGEGEDESDEDDESDESEEETPKKAEPGKK 208
Query: 148 RPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANNDQTKQQPHKSG 207
R +SA+KT DKKAKFVTPQKT+ KKG H+ATPHPSK++ K+PAN +Q Q P KSG
Sbjct: 209 RKADSATKTPA-DKKAKFVTPQKTDGKKGSGHVATPHPSKQAGKSPANKNQ--QTP-KSG 264
Query: 208 GSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
G+ CK+CNR F +E L+SH+KAKH A
Sbjct: 265 GAHLCKTCNRGFGSENALESHSKAKHSA 292
>gi|73919938|sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; AltName: Full=Histone
deacetylase 2a; Short=HD2a; AltName: Full=ScHD2a
gi|33667906|gb|AAQ24532.1| histone deacetylase [Solanum chacoense]
Length = 269
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 69/98 (70%), Gaps = 11/98 (11%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANND 197
TPKKAE +K+R +SA+KT V DKKAK TPQKT+ KKG H+ATPHPSK+++KTP
Sbjct: 181 TPKKAEPAKRRKADSATKTPVTDKKAKLTTPQKTDGKKGGGHVATPHPSKQASKTP---- 236
Query: 198 QTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
KS GS CK CNRSF +EG L SH+KAKH A
Sbjct: 237 -------KSAGSHHCKPCNRSFGSEGALDSHSKAKHSA 267
>gi|109716218|gb|ABG43091.1| histone deacetylase HDAC2 [Triticum aestivum]
Length = 310
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 6/101 (5%)
Query: 137 ETPKKAESSKKRPVESASKTYVPDKKAKFVTP--QKTEEKKGVSHIATPHPSKKSAKTPA 194
ETPKK E+ KKR S KT V DKKAK TP QKT +KKG H+ATPHP+KK+ KTPA
Sbjct: 213 ETPKKQETGKKRAAGSVLKTPVTDKKAKIATPSGQKTGDKKGAVHVATPHPAKKAGKTPA 272
Query: 195 NNDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
++++ KSGGS CKSC+++F +EG L SH+KAKH A
Sbjct: 273 TSEKSP----KSGGSVACKSCSKTFNSEGALASHSKAKHEA 309
>gi|356572522|ref|XP_003554417.1| PREDICTED: histone deacetylase HDT1-like [Glycine max]
Length = 293
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 66/98 (67%), Gaps = 4/98 (4%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANND 197
T KK E+S KR +ES+ KT VP KK KFVTPQKT+ K V H ATPHPSK++ K ANN
Sbjct: 199 TAKKIEASNKRGIESSKKTPVPVKKTKFVTPQKTDSKN-VVHAATPHPSKQAGKATANN- 256
Query: 198 QTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
K Q KSGG + CK CNR F TE L SH KAKH A
Sbjct: 257 --KLQSPKSGGDYSCKPCNRLFKTEDALSSHNKAKHSA 292
>gi|351727527|ref|NP_001235884.1| histone deacetylase HDT1 [Glycine max]
gi|73919939|sp|Q8LJS2.1|HDT1_SOYBN RecName: Full=Histone deacetylase HDT1; AltName: Full=Histone
deacetylase 2a; Short=HD2a; AltName: Full=Nucleolar
histone deacetylase HD2-p39
gi|22597156|gb|AAN03465.1| nucleolar histone deacetylase HD2-P39 [Glycine max]
Length = 295
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 124/223 (55%), Gaps = 33/223 (14%)
Query: 14 ATDDDDNSDSDEDKMDIRLVSNGKPELQAKPLSEKPIAVEPSASTAKQNKKDVKPKLKAD 73
A+D D+S+ DE+ + + NGKPEL+A E +PS S PK+ A
Sbjct: 104 ASDFSDSSEEDEE-LALEGQDNGKPELKA----EGAKVTKPSKSI---------PKIGAP 149
Query: 74 GSDSDDSDLNTSSSDDDETSDDENPNLVNRDGSSDESSGELDESDDDEDDEGTDESESDD 133
++D + DD++ + + D + ++ SG DE DDD + E ESD
Sbjct: 150 ----------AKAADPKKDEDDDSDDESDDDLAGEDESGSSDEMDDDSNSE----EESDG 195
Query: 134 EDEETP-KKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKT 192
+DEETP KK + KKRP ESA+KT + KKAK TP+KT+ KK V H+ATPHPSKK KT
Sbjct: 196 DDEETPAKKVDQGKKRPNESAAKTPISAKKAKTATPEKTDGKKSV-HVATPHPSKKGGKT 254
Query: 193 PANNDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
P + TK Q S G C SC +SFT E GLQ H KAKHG
Sbjct: 255 P---NSTKGQTPNSAGQLSCASCKKSFTNEAGLQQHKKAKHGG 294
>gi|357132300|ref|XP_003567768.1| PREDICTED: histone deacetylase HDT2-like [Brachypodium distachyon]
Length = 296
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 82/113 (72%), Gaps = 7/113 (6%)
Query: 123 DEGTDESESDDEDEETPKKAESSKKRPVESASKTYVPDKKAKFVTP--QKTEEKKGVSHI 180
++GT E ++E+EETPKK+ + KKR E+ KT DKKAK TP QKT +KKG H+
Sbjct: 185 EDGTSEESDEEEEEETPKKS-TGKKRAAETVLKTPASDKKAKAATPSGQKTGDKKGAVHV 243
Query: 181 ATPHPSKKSAKTPANNDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKH 233
ATPHP+KK++KTPA +D++ KSGGS CKSC+++F +E LQSH+KAKH
Sbjct: 244 ATPHPAKKASKTPATSDKSP----KSGGSVACKSCSKTFNSETALQSHSKAKH 292
>gi|7804960|gb|AAF70196.1|AF255711_1 putative histone deacetylase HD2 [Oryza sativa]
Length = 297
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 3/100 (3%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKFVTP--QKTEEKKGVSHIATPHPSKKSAKTPAN 195
TPKK E+ K++ E KT DKKAK TP QKT +KKGV H+ATPHP+K+++KTP N
Sbjct: 198 TPKKPETGKRKVAEIVLKTPSSDKKAKIATPSGQKTGDKKGV-HVATPHPAKQASKTPVN 256
Query: 196 NDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
+ ++ P GGS CKSC+++F +E LQSH+KAKH A
Sbjct: 257 DKSKEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKHPA 296
>gi|218197385|gb|EEC79812.1| hypothetical protein OsI_21251 [Oryza sativa Indica Group]
Length = 297
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 3/100 (3%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKFVTP--QKTEEKKGVSHIATPHPSKKSAKTPAN 195
TPKK E+ K++ E KT DKKAK TP QKT +KKGV H+ATPHP+K+++KTP N
Sbjct: 198 TPKKPETGKRKVAEIVLKTPSSDKKAKIATPSGQKTGDKKGV-HVATPHPAKQASKTPVN 256
Query: 196 NDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
+ ++ P GGS CKSC+++F +E LQSH+KAKH A
Sbjct: 257 DKSKEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKHPA 296
>gi|115465847|ref|NP_001056523.1| Os05g0597100 [Oryza sativa Japonica Group]
gi|113580074|dbj|BAF18437.1| Os05g0597100 [Oryza sativa Japonica Group]
gi|215706316|dbj|BAG93172.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632796|gb|EEE64928.1| hypothetical protein OsJ_19788 [Oryza sativa Japonica Group]
Length = 297
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 3/100 (3%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKFVTP--QKTEEKKGVSHIATPHPSKKSAKTPAN 195
TPKK E+ K++ E KT DKKAK TP QKT +KKGV H+ATPHP+K+++KTP N
Sbjct: 198 TPKKPETGKRKVAEIVLKTPSSDKKAKIATPSGQKTGDKKGV-HVATPHPAKQASKTPVN 256
Query: 196 NDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
+ ++ P GGS CKSC+++F +E LQSH+KAKH A
Sbjct: 257 DKSKEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKHPA 296
>gi|51854334|gb|AAU10714.1| putative histone deacetylase HD2 [Oryza sativa Japonica Group]
Length = 297
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 3/100 (3%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKFVTP--QKTEEKKGVSHIATPHPSKKSAKTPAN 195
TPKK E+ K++ E KT DKKAK TP QKT +KKGV H+ATPHP+K+++KTP N
Sbjct: 198 TPKKPETGKRKVAEIVLKTPSSDKKAKIATPSGQKTGDKKGV-HVATPHPAKQASKTPVN 256
Query: 196 NDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
+ ++ P GGS CKSC+++F +E LQSH+KAKH A
Sbjct: 257 DKSKEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKHPA 296
>gi|449456084|ref|XP_004145780.1| PREDICTED: histone deacetylase HDT1-like [Cucumis sativus]
Length = 293
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 119/219 (54%), Gaps = 34/219 (15%)
Query: 18 DDNSDSDEDKMDIRLVSNGKPELQAKPLSEKPIAVEPSASTAKQNKKDVKPKLKADGSDS 77
D +S S+++++ + NGKP P KP VE + + KK +KP
Sbjct: 107 DSDSASEDEELPLVSAPNGKPS----PKGVKPGLVESNDAKKASLKKPLKP--------- 153
Query: 78 DDSDLNTSSSDDDETSDDENPNLVNRDGSSDESSGELDESDDDEDDEGTDESESDDEDEE 137
S DD+ +++ + + D + LD D +E + + DEE
Sbjct: 154 ---------SKDDDEDSEDDESDGDEDSDDESDEEMLD------GDNSDEEDDDSESDEE 198
Query: 138 TPKKAESSKKRPVESASKTY-VPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANN 196
TPKK ES+KKR ESA+KT VP KKAK TP+KT+ KKG H ATPHP+KK+ KTPA
Sbjct: 199 TPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKKG-GHTATPHPAKKTGKTPAAK 257
Query: 197 DQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
+T KSGG F CKSC+RSF ++ LQSH+KAKHG
Sbjct: 258 LETP----KSGGQFSCKSCDRSFGSDVALQSHSKAKHGG 292
>gi|57900677|gb|AAW57802.1| putative histone deacetylase HD2 [Oryza sativa Japonica Group]
Length = 274
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 3/100 (3%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKFVTP--QKTEEKKGVSHIATPHPSKKSAKTPAN 195
TPKK E+ K++ E KT DKKAK TP QKT +KKGV H+ATPHP+K+++KTP N
Sbjct: 175 TPKKPETGKRKVAEIVLKTPSSDKKAKIATPSGQKTGDKKGV-HVATPHPAKQASKTPVN 233
Query: 196 NDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
+ ++ P GGS CKSC+++F +E LQSH+KAKH A
Sbjct: 234 DKSKEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKHPA 273
>gi|356539317|ref|XP_003538145.1| PREDICTED: histone deacetylase HDT1-like [Glycine max]
Length = 295
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Query: 140 KKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANNDQT 199
KK + KKRP ESA+KT V KKAK TP+KT KK V H+ATPHPSKK KTP + T
Sbjct: 203 KKVDQGKKRPNESAAKTPVSAKKAKTATPEKTNGKKNV-HVATPHPSKKGGKTP---NST 258
Query: 200 KQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
K Q S G C SC +SFT E GLQ H KAKHG
Sbjct: 259 KGQSPSSAGQLSCASCKKSFTNEVGLQQHKKAKHGG 294
>gi|363808344|ref|NP_001241996.1| uncharacterized protein LOC100792094 [Glycine max]
gi|255641453|gb|ACU21002.1| unknown [Glycine max]
Length = 306
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 67/104 (64%), Gaps = 9/104 (8%)
Query: 139 PKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPAN--- 195
PKK + KKRP ESASKT V KKAK TP+KT+ KKG H ATPHP+KK KTP
Sbjct: 204 PKKVDLGKKRPNESASKTPVSSKKAKNATPEKTDGKKG-GHTATPHPAKKGGKTPNREAK 262
Query: 196 ----NDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
N + K + KSGG CK+C++SFT E GLQ H KAKHG
Sbjct: 263 AKTPNSEAKAKTPKSGG-LSCKTCSKSFTNESGLQQHNKAKHGG 305
>gi|449496230|ref|XP_004160079.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase HDT1-like
[Cucumis sativus]
Length = 293
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 118/219 (53%), Gaps = 34/219 (15%)
Query: 18 DDNSDSDEDKMDIRLVSNGKPELQAKPLSEKPIAVEPSASTAKQNKKDVKPKLKADGSDS 77
D +S S+++++ + NGKP P KP VE + + KK +KP
Sbjct: 107 DSDSASEDEELPLVSAPNGKPS----PKGVKPGLVESNDAKKASLKKPLKP--------- 153
Query: 78 DDSDLNTSSSDDDETSDDENPNLVNRDGSSDESSGELDESDDDEDDEGTDESESDDEDEE 137
S DD+ +++ + + D + LD D +E + + DEE
Sbjct: 154 ---------SKDDDEDSEDDESDGDEDSDDESDEEMLD------GDNSDEEDDDSESDEE 198
Query: 138 TPKKAESSKKRPVESASKTY-VPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANN 196
TPKK ES+KKR ESA+KT VP KKAK TP+KT+ KKG H ATPHP+K + KTPA
Sbjct: 199 TPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKKG-GHTATPHPAKXTGKTPAAK 257
Query: 197 DQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
+T KSGG F CKSC+RSF ++ LQSH+KAKHG
Sbjct: 258 LETP----KSGGQFSCKSCDRSFGSDVALQSHSKAKHGG 292
>gi|297810603|ref|XP_002873185.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319022|gb|EFH49444.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 313
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 69/100 (69%), Gaps = 5/100 (5%)
Query: 138 TPKKAESSKKRPVES-ASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANN 196
TPKK E+SKKR E+ +SK P+KKAKF TPQKT+ KK H+ATPHPSK++ K +
Sbjct: 184 TPKKPEASKKRSAEANSSKNPAPNKKAKFETPQKTDSKKPHVHVATPHPSKQAGKNSGGS 243
Query: 197 D----QTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAK 232
+QQ KS G+F CKSC R+FT+E GLQSHTK +
Sbjct: 244 SIGETSKQQQTPKSAGAFGCKSCTRTFTSEMGLQSHTKGQ 283
>gi|162459285|ref|NP_001105402.1| histone deacetylase HDT1 [Zea mays]
gi|73919937|sp|O24591.1|HDT1_MAIZE RecName: Full=Histone deacetylase HDT1; AltName: Full=Histone
deacetylase 2a; Short=HD2a; AltName: Full=Nucleolar
histone deacetylase HD2-p39; AltName: Full=Zm-HD2a
gi|2257756|gb|AAB63262.1| nucleolar histone deacetylase HD2-p39 [Zea mays]
gi|3650466|gb|AAC61674.1| histone deacetylase HD2-p39 [Zea mays]
Length = 307
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 72/105 (68%), Gaps = 9/105 (8%)
Query: 138 TPKKAESSKKRPVESAS-KTYVPDKKAKFVTP--QKTEEKKGVS-HIATPHPSKKSAKTP 193
TPKK E KKRP ES+ KT + DKKAK TP QKT KKG + H+ATPHP+K KT
Sbjct: 199 TPKKPEVGKKRPAESSVLKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPAK--GKTI 256
Query: 194 ANNDQTKQQPH---KSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
NND++ + P KSGGS PCK C++SF +E LQ+H++AK GA
Sbjct: 257 VNNDKSVKSPKSAPKSGGSVPCKPCSKSFISETALQAHSRAKMGA 301
>gi|449456086|ref|XP_004145781.1| PREDICTED: histone deacetylase HDT1-like [Cucumis sativus]
gi|449496234|ref|XP_004160080.1| PREDICTED: histone deacetylase HDT1-like [Cucumis sativus]
Length = 296
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/99 (59%), Positives = 69/99 (69%), Gaps = 8/99 (8%)
Query: 138 TPKKA-ESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANN 196
TPKK ESSKKR ESASKT V KK K + +KT+ KKG H ATPHP+KK AK+P
Sbjct: 204 TPKKVNESSKKRSNESASKTPV-SKKTKLASAEKTDSKKG-GHTATPHPAKKPAKSPG-- 259
Query: 197 DQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
K + KSGG F C SC+RSF ++G LQSH+KAKHGA
Sbjct: 260 ---KAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHGA 295
>gi|297806343|ref|XP_002871055.1| hypothetical protein ARALYDRAFT_349656 [Arabidopsis lyrata subsp.
lyrata]
gi|297316892|gb|EFH47314.1| hypothetical protein ARALYDRAFT_349656 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
Query: 160 DKKAKFVTPQKTEEKKGVSHIATPHPSKK----SAKTPANNDQTKQQPHKSGGSFPCKSC 215
+KKAKFVTPQKTE KK H+ATPHPSK+ S + +QQ KS G+F CKSC
Sbjct: 245 NKKAKFVTPQKTETKKPHVHVATPHPSKQGGNNSGGSSIGEKAKQQQTPKSAGAFGCKSC 304
Query: 216 NRSFTTEGGLQSHTKAKHGAPA 237
+R+FT+E GLQSHTKAKH A A
Sbjct: 305 SRTFTSEMGLQSHTKAKHSAAA 326
>gi|145357606|ref|NP_195994.3| histone deacetylase HDT3 [Arabidopsis thaliana]
gi|73919942|sp|Q9LZR5.2|HDT3_ARATH RecName: Full=Histone deacetylase HDT3; AltName: Full=HD-tuins
protein 3; AltName: Full=Histone deacetylase 2c
gi|7804963|gb|AAF70197.1|AF255712_1 putative histone deacetylase HD2c [Arabidopsis thaliana]
gi|13926268|gb|AAK49605.1|AF372889_1 AT5g03740/F17C15_160 [Arabidopsis thaliana]
gi|9758002|dbj|BAB08599.1| histone deacetylase HD2c [Arabidopsis thaliana]
gi|21360990|gb|AAM49770.1| HDT3 [Arabidopsis thaliana]
gi|22655422|gb|AAM98303.1| At5g03740/F17C15_160 [Arabidopsis thaliana]
gi|332003266|gb|AED90649.1| histone deacetylase HDT3 [Arabidopsis thaliana]
Length = 294
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Query: 160 DKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANND----QTKQQPHKSGGSFPCKSC 215
+KKAKFVTPQKT+ KK H+ATPHPSK++ K +QQ KS G+F CKSC
Sbjct: 213 NKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSC 272
Query: 216 NRSFTTEGGLQSHTKAKHGAPA 237
R+FT+E GLQSHTKAKH A A
Sbjct: 273 TRTFTSEMGLQSHTKAKHSAAA 294
>gi|255573038|ref|XP_002527449.1| Histone deacetylase 2a, putative [Ricinus communis]
gi|223533184|gb|EEF34941.1| Histone deacetylase 2a, putative [Ricinus communis]
Length = 310
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Query: 137 ETPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANN 196
ETPKKA+ KKR +SA KT V KKAK +TPQKT + K H ATPHP+ K AK AN
Sbjct: 210 ETPKKADKGKKRQNDSAVKTPVSSKKAKLITPQKTADGKKGGHTATPHPA-KGAKASANG 268
Query: 197 DQTKQQPH--KSGGSFPCKSCNRSFTTEGGLQSHTKAKH 233
+ K Q KSGG F C SC RSF ++ LQSH+KAKH
Sbjct: 269 NTPKPQTQTPKSGGKFSCNSCERSFGSDAALQSHSKAKH 307
>gi|7340659|emb|CAB82939.1| histone deacetylase-like protein [Arabidopsis thaliana]
Length = 296
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Query: 160 DKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANND----QTKQQPHKSGGSFPCKSC 215
+KKAKFVTPQKT+ KK H+ATPHPSK++ K +QQ KS G+F CKSC
Sbjct: 215 NKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSC 274
Query: 216 NRSFTTEGGLQSHTKAKHGAPA 237
R+FT+E GLQSHTKAKH A A
Sbjct: 275 TRTFTSEMGLQSHTKAKHSAAA 296
>gi|224104989|ref|XP_002313645.1| histone deacetylase [Populus trichocarpa]
gi|222850053|gb|EEE87600.1| histone deacetylase [Populus trichocarpa]
Length = 275
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 72/100 (72%), Gaps = 6/100 (6%)
Query: 136 EETPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPAN 195
EETPKKAE+SKKR +SA+KT V KKAK TPQKT+ KK TPHP+K K AN
Sbjct: 181 EETPKKAETSKKRATDSATKTPVSSKKAKTATPQKTDAKKAGQ--VTPHPAK--GKAAAN 236
Query: 196 NDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
+ +K KSGG+F CKSC+++F T+G L+SH++AKHGA
Sbjct: 237 GNSSKSP--KSGGNFSCKSCDKAFGTDGALKSHSQAKHGA 274
>gi|363807088|ref|NP_001242333.1| uncharacterized protein LOC100795506 [Glycine max]
gi|255644846|gb|ACU22923.1| unknown [Glycine max]
Length = 307
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 67/100 (67%), Gaps = 5/100 (5%)
Query: 140 KKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANNDQT 199
KKA+ KKRP ESASKT V KKAK TP+KT+ KKG H ATPHP+KK KTP++ +
Sbjct: 208 KKADLGKKRPNESASKTPVSSKKAKNATPEKTDGKKG-GHTATPHPAKKGGKTPSSEAKA 266
Query: 200 KQQPHKS----GGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
K +++ G CKSC++SF +E GLQ H KAKHG
Sbjct: 267 KTPNNEAKTPMSGGLSCKSCSKSFNSESGLQQHNKAKHGG 306
>gi|118482036|gb|ABK92949.1| unknown [Populus trichocarpa]
Length = 275
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 71/100 (71%), Gaps = 6/100 (6%)
Query: 136 EETPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPAN 195
EETPKKAE+SKKR +SA+KT V KKAK TP KT+ KK TPHP+K K AN
Sbjct: 181 EETPKKAETSKKRATDSATKTPVSSKKAKTATPLKTDAKKAGQ--VTPHPAK--GKAAAN 236
Query: 196 NDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
+ +K KSGG+F CKSC+++F T+G L+SH++AKHGA
Sbjct: 237 GNSSKSP--KSGGNFSCKSCDKAFGTDGALKSHSQAKHGA 274
>gi|413950327|gb|AFW82976.1| hypothetical protein ZEAMMB73_070282, partial [Zea mays]
Length = 167
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 4/82 (4%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKFVTP--QKTEEKKGVSHIATPHPSKKSAKTPAN 195
TPKK E+ KKR E+A KT + DKKAK TP QKT KKG +H+ATPHP+K KTPAN
Sbjct: 88 TPKKPEAGKKRGAENALKTPLSDKKAKVATPPAQKTGGKKGATHVATPHPAK--GKTPAN 145
Query: 196 NDQTKQQPHKSGGSFPCKSCNR 217
ND++ ++ KSGGS PCKSC++
Sbjct: 146 NDKSTEKSPKSGGSVPCKSCSK 167
>gi|326497089|dbj|BAK02129.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326498741|dbj|BAK02356.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 310
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 61/91 (67%), Gaps = 6/91 (6%)
Query: 137 ETPKKAESSKKRPVESASKTYVPDKKAKFVTP--QKTEEKKGVSHIATPHPSKKSAKTPA 194
ETPKK E+ KKR S KT V DKKAK TP QKT +KKG H+ATPHP+KK KTPA
Sbjct: 213 ETPKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPA 272
Query: 195 NNDQTKQQPHKSGGSFPCKSCNRSFTTEGGL 225
+D++ KSGGS CKSC ++F +E L
Sbjct: 273 TSDKSP----KSGGSVACKSCTKTFNSEVAL 299
>gi|188482320|gb|ACD50315.1| histone deacetylase HD2 isoform 1 [Hordeum vulgare]
Length = 310
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 61/91 (67%), Gaps = 6/91 (6%)
Query: 137 ETPKKAESSKKRPVESASKTYVPDKKAKFVTP--QKTEEKKGVSHIATPHPSKKSAKTPA 194
ETPKK E+ KKR S KT V DKKAK TP QKT +KKG H+ATPHP+KK KTPA
Sbjct: 213 ETPKKQETGKKRAAGSDIKTPVADKKAKIATPSGQKTGDKKGAVHVATPHPAKKVGKTPA 272
Query: 195 NNDQTKQQPHKSGGSFPCKSCNRSFTTEGGL 225
+D++ KSGGS CKSC ++F +E L
Sbjct: 273 TSDKSP----KSGGSVACKSCTKTFNSEVAL 299
>gi|195639676|gb|ACG39306.1| histone deacetylase 2b [Zea mays]
Length = 304
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 70/105 (66%), Gaps = 11/105 (10%)
Query: 138 TPKKAESSKKRPVESAS-KTYVPDKKAKFVTP--QKTEEKKGVS-HIATPHPSKKSAKTP 193
TPKK E KKR ES+ KT + DKKAK TP QKT KKG + H+ATPHP+K KT
Sbjct: 203 TPKKPEVGKKRAAESSVLKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPAK--GKTI 260
Query: 194 ANNDQTKQQPH---KSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
NND++ + P KSG PCKSC++SF ++ LQ+H+KAKHG
Sbjct: 261 VNNDKSVKSPKSAPKSG--VPCKSCSKSFISQTALQAHSKAKHGG 303
>gi|388515061|gb|AFK45592.1| unknown [Medicago truncatula]
Length = 302
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 64/96 (66%), Gaps = 6/96 (6%)
Query: 140 KKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANNDQT 199
KK + KKRP ESASKT + KK+K TP+KT+ KK H ATPHP KK KTP ++ +T
Sbjct: 212 KKVDQGKKRPNESASKTPISSKKSKNATPEKTDGKKA-GHTATPHP-KKGGKTPNSDAKT 269
Query: 200 KQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
KSGG C SC+++F +E GL H+KAKHGA
Sbjct: 270 P----KSGGGLSCSSCSKTFNSETGLTQHSKAKHGA 301
>gi|84468402|dbj|BAE71284.1| putative histone deacetylase [Trifolium pratense]
Length = 304
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Query: 137 ETPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANN 196
ETPKK E KR ES+ KT V K+AKF TP+KT K GV H+ TP+P K++ K+ ANN
Sbjct: 206 ETPKKTEGGTKRVAESSKKTPVAVKRAKFATPEKTGSKNGV-HVDTPYP-KQTVKSGANN 263
Query: 197 D-QTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
KQQ +S G + CK C RSF TE L SH +AKH A
Sbjct: 264 KPPMKQQTPQSTGDYSCKPCKRSFKTEDALGSHNRAKHSA 303
>gi|296083874|emb|CBI24262.3| unnamed protein product [Vitis vinifera]
Length = 105
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 45/61 (73%)
Query: 142 AESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANNDQTKQ 201
+ KKRP ESA+KT VP KKAK V+PQ T+ KKG +H ATPHP+KK+ KTPA D+ K
Sbjct: 16 VQPGKKRPTESATKTLVPAKKAKLVSPQNTDGKKGGAHTATPHPNKKAGKTPATGDKGKG 75
Query: 202 Q 202
Q
Sbjct: 76 Q 76
>gi|357131507|ref|XP_003567378.1| PREDICTED: uncharacterized protein LOC100837477 [Brachypodium
distachyon]
Length = 312
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 35/141 (24%)
Query: 119 DDEDDEGTDESESDDEDEETPKKAESSKKRPVE------SASKTYVPD------------ 160
DD D +G SD + + TPKK + +K RPVE SA KT +
Sbjct: 181 DDNDSKG-----SDQDMDHTPKKMKGNK-RPVETPLKTPSAKKTNIASPTVGKKTGSCVG 234
Query: 161 KKAKFV---TPQKTEEKKGVS---HIATPHPSKKSAKTPANNDQTKQQPHKSGGSFPCKS 214
KK+ V TP ++ +S H+ATPHP+K + KTP N+D++KQ S+ C S
Sbjct: 235 KKSAHVHVATPYPAKQAHKISEHVHVATPHPAKHARKTPENSDKSKQS-----ASYFCNS 289
Query: 215 CNRSFTTEGGLQSHTKAKHGA 235
CNR+F + GL+ H++ KHGA
Sbjct: 290 CNRTFNSSMGLEDHSRMKHGA 310
>gi|218189574|gb|EEC72001.1| hypothetical protein OsI_04861 [Oryza sativa Indica Group]
Length = 280
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 60/126 (47%), Gaps = 29/126 (23%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKFVTPQK-----TEEKKGVSHIATPHPSKKSAKT 192
TP K R VE+ T P K+A+ TP T ++ G H+ATP+P+K++ KT
Sbjct: 154 TPSKNTKGTNRHVETPLNT-PPQKRARLATPIMDSKAGTGKRSGYVHVATPYPAKQAKKT 212
Query: 193 PANNDQTKQ----------QPHKSG-------------GSFPCKSCNRSFTTEGGLQSHT 229
P NND KQ P K + CK CN++F T GL++H+
Sbjct: 213 PVNNDMAKQSSGYVHVATPYPAKQAKKRTANNDMSEHSAGYACKPCNKTFNTSMGLEAHS 272
Query: 230 KAKHGA 235
KAKH A
Sbjct: 273 KAKHTA 278
>gi|115441743|ref|NP_001045151.1| Os01g0909500 [Oryza sativa Japonica Group]
gi|56785371|dbj|BAD82329.1| putative histone deacetylase 2 isoform b [Oryza sativa Japonica
Group]
gi|113534682|dbj|BAF07065.1| Os01g0909500 [Oryza sativa Japonica Group]
gi|215697538|dbj|BAG91532.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 320
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 81/167 (48%), Gaps = 35/167 (20%)
Query: 77 SDDSDLNTSSSDDDETSDDENPNLVNRDGSSDESSGELDESDDDEDDEGTDESESDDEDE 136
SDD+D SSD++ET+ E GE DE + E ES DE E
Sbjct: 179 SDDADYEGKSSDEEETTAKE---------------GE----STDEKETPAKEGESSDE-E 218
Query: 137 ETPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGV------SH--IATPHPSKK 188
ETP K + PV + KT+ P + AK P T+ K G SH + PHP+K+
Sbjct: 219 ETPAKNTKEENEPVVTPLKTF-PHEMAKIEAPI-TDNKTGTNTSKRGSHLQVTNPHPAKQ 276
Query: 189 SAKTPANNDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
+ +TP ND K+ S+ C SC ++F + G L+ H+KAKH A
Sbjct: 277 AKRTPIKNDTPKR-----SASYVCNSCKKTFNSSGALKDHSKAKHPA 318
>gi|148906160|gb|ABR16237.1| unknown [Picea sitchensis]
Length = 334
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 67/124 (54%), Gaps = 28/124 (22%)
Query: 138 TPKKAESSKKRPV-ESASKTYVPDKKAKFVTP---QKTEEKKG--VSHIATPHPSKKSAK 191
TPK A + KKRP+ +S +K+ DKKAK TP QK KG H+ATP+P K+ K
Sbjct: 212 TPKPA-AGKKRPMPDSVTKSPSTDKKAKISTPAGGQKPGADKGKKTEHVATPYP-KQGGK 269
Query: 192 TPANNDQTKQQP----HKSGGS----------------FPCKSCNRSFTTEGGLQSHTKA 231
PA+ + K+ P H++ GS F C+SC+R FT+EG L SH A
Sbjct: 270 GPASGVKGKETPLGSKHQTPGSKGKNVSTPESGKKSGQFNCQSCSRDFTSEGALSSHKAA 329
Query: 232 KHGA 235
KHG
Sbjct: 330 KHGG 333
>gi|242055343|ref|XP_002456817.1| hypothetical protein SORBIDRAFT_03g043340 [Sorghum bicolor]
gi|241928792|gb|EES01937.1| hypothetical protein SORBIDRAFT_03g043340 [Sorghum bicolor]
Length = 152
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
Query: 127 DESESDDEDEETPKKAESSKKRPVESASKTYVPDKKAKFVTPQK--------TEEKKGVS 178
DE S +ED+E K+ K RP E KT P+KKA+ TP K T + G
Sbjct: 33 DEDFSSNEDDEDSPKSAKDKNRPEEKTLKT-PPEKKARMTTPGKNTDEKCSGTGMRTGYV 91
Query: 179 HIATPHPSKKSAKTPANNDQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAK 232
H+ATP+PSK KTP+ ++ KQ + C SC+R+F + L++H K K
Sbjct: 92 HVATPYPSKLVKKTPSIVERPKQP-----TGYACNSCSRTFNSYIALKTHCKVK 140
>gi|388495218|gb|AFK35675.1| unknown [Lotus japonicus]
Length = 297
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 140 KKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANNDQT 199
KK + KKRP ESASKT V KKAK TP+K + KK V H ATPHP K+ KTP N
Sbjct: 210 KKVDQGKKRPNESASKTPVSGKKAKNATPEKPDGKKNV-HTATPHPKKQDGKTP--NSFG 266
Query: 200 KQQPHKSGGSFPCKSCN-RSF-TTEGGLQ 226
K + SGG F KS + F + +GG Q
Sbjct: 267 KNKSPNSGGKFSNKSGGSKPFNSNKGGRQ 295
>gi|297808263|ref|XP_002872015.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317852|gb|EFH48274.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 307
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 138 TPKKAE-SSKKRPVESASKTYV-----PDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAK 191
TPKK E +KKRP ES SKT V A TPQKTEEKK H ATPHP+KKS K
Sbjct: 207 TPKKPEPINKKRPNESTSKTPVSGKKAKPAAAPAATPQKTEEKKKGGHTATPHPAKKSGK 266
Query: 192 TPANNDQTKQQPHKSGG 208
+P N +Q+ + +S G
Sbjct: 267 SPVNANQSPKAGGQSSG 283
>gi|357471963|ref|XP_003606266.1| Histone deacetylase HDT1 [Medicago truncatula]
gi|355507321|gb|AES88463.1| Histone deacetylase HDT1 [Medicago truncatula]
Length = 267
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 146 KKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPAN 195
KKR E+ S+T VP KKAK TP+KT+ KK V HIATPHP KK KTP N
Sbjct: 190 KKRTNETGSQTPVPTKKAKDATPEKTDGKKSV-HIATPHPMKKGGKTPQN 238
>gi|388499016|gb|AFK37574.1| unknown [Medicago truncatula]
Length = 267
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 146 KKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPAN 195
KKR E+ S+T VP KKAK TP+KT+ KK V HIATPHP KK KTP N
Sbjct: 190 KKRTNETGSQTPVPTKKAKDATPEKTDGKKSV-HIATPHPMKKGGKTPQN 238
>gi|30688577|ref|NP_851056.1| histone deacetylase HDT2 [Arabidopsis thaliana]
gi|73919940|sp|Q56WH4.2|HDT2_ARATH RecName: Full=Histone deacetylase HDT2; AltName: Full=HD-tuins
protein 2; AltName: Full=Histone deacetylase 2b
gi|10178239|dbj|BAB11671.1| histone deacetylase-like protein [Arabidopsis thaliana]
gi|16649047|gb|AAL24375.1| histone deacetylase-like protein [Arabidopsis thaliana]
gi|19310471|gb|AAL84970.1| AT5g22650/MDJ22_7 [Arabidopsis thaliana]
gi|21689603|gb|AAM67423.1| AT5g22650/MDJ22_7 [Arabidopsis thaliana]
gi|332005675|gb|AED93058.1| histone deacetylase HDT2 [Arabidopsis thaliana]
Length = 306
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 49/77 (63%), Gaps = 10/77 (12%)
Query: 138 TPKKAE-SSKKRPVESASKTYVPDKKAKFV-----TPQKTEEKKGVSHIATPHPSKKSAK 191
TPKK E +KKRP ES SKT V KKAK TPQKTEEKK H ATPHP+KK K
Sbjct: 199 TPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGK 258
Query: 192 TPANNDQTKQQPHKSGG 208
+P N +Q+ KSGG
Sbjct: 259 SPVNANQSP----KSGG 271
>gi|145358319|ref|NP_197657.3| histone deacetylase HDT2 [Arabidopsis thaliana]
gi|11066137|gb|AAG28473.1|AF195546_1 putative histone deacetylase [Arabidopsis thaliana]
gi|2854070|gb|AAC02539.1| putative histone deacetylase [Arabidopsis thaliana]
gi|332005676|gb|AED93059.1| histone deacetylase HDT2 [Arabidopsis thaliana]
Length = 305
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 50/77 (64%), Gaps = 11/77 (14%)
Query: 138 TPKKAE-SSKKRPVESASKTYVPDKKAKFV-----TPQKTEEKKGVSHIATPHPSKKSAK 191
TPKK E +KKRP ES SKT V KKAK TPQKTE+KKG H ATPHP+KK K
Sbjct: 199 TPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEKKKG-GHTATPHPAKKGGK 257
Query: 192 TPANNDQTKQQPHKSGG 208
+P N +Q+ KSGG
Sbjct: 258 SPVNANQSP----KSGG 270
>gi|357471965|ref|XP_003606267.1| Histone deacetylase HDT1 [Medicago truncatula]
gi|355507322|gb|AES88464.1| Histone deacetylase HDT1 [Medicago truncatula]
Length = 349
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Query: 136 EETP-KKAESSKKRPV--ESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKT 192
EETP KK + K R E+ S+T V KKAK TP KT++KK V HIATPHP KK KT
Sbjct: 259 EETPAKKVDQGKNRERSNEALSQTLVLTKKAKIATPVKTDDKKYV-HIATPHPMKKGGKT 317
Query: 193 PAN--NDQT 199
N DQT
Sbjct: 318 SQNAAKDQT 326
>gi|84453192|dbj|BAE71193.1| putative Nucleolar histone deacetylase [Trifolium pratense]
Length = 316
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 135 DEETPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPA 194
DEETP + + KRP E+A +T V K+AK TP KT++KK V HIATPHP+KK KTP
Sbjct: 237 DEETPVQKGKNNKRPNEAAPQTPVSAKRAKNATPGKTDDKKAV-HIATPHPNKKGGKTPQ 295
Query: 195 N 195
N
Sbjct: 296 N 296
>gi|62321463|dbj|BAD94880.1| putative histone deacetylase (HD2B) [Arabidopsis thaliana]
Length = 100
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 43/68 (63%), Gaps = 9/68 (13%)
Query: 146 KKRPVESASKTYVPDKKAKFV-----TPQKTEEKKGVSHIATPHPSKKSAKTPANNDQTK 200
KKRP ES SKT V KKAK TPQKTEEKK H ATPHP+KK K+P N +Q+
Sbjct: 2 KKRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGKSPVNANQSP 61
Query: 201 QQPHKSGG 208
KSGG
Sbjct: 62 ----KSGG 65
>gi|218189575|gb|EEC72002.1| hypothetical protein OsI_04862 [Oryza sativa Indica Group]
Length = 1858
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 76/136 (55%), Gaps = 23/136 (16%)
Query: 112 GELDESDDDEDDEGTDESESD----------DEDEETPKKAESSKKRPVESASKTYVPDK 161
E++ S++++ +G DES S DE++E P+K ESSK + +A T K
Sbjct: 1733 AEMESSEEEDGSDGQDESSSSIVSTDEEDESDEEDEIPEKPESSK---LTAAGSTLSSGK 1789
Query: 162 KAKFVT--PQKTEEKKGVSHIATPHPSKKSAKTPANNDQTKQQPHKSGGSFPCKSCNRSF 219
K+K T QKT +K HP+K+ KTPA + K+ P +S G+ CK C+++F
Sbjct: 1790 KSKTATHFGQKTGDKN-------THPAKEDGKTPAISKPNKETP-ESSGTHACKYCSKAF 1841
Query: 220 TTEGGLQSHTKAKHGA 235
+++ L+SH KA+H A
Sbjct: 1842 SSDKSLRSHQKARHPA 1857
>gi|334185733|ref|NP_001190012.1| histone deacetylase HDT1 [Arabidopsis thaliana]
gi|332644424|gb|AEE77945.1| histone deacetylase HDT1 [Arabidopsis thaliana]
Length = 242
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 47/99 (47%), Gaps = 20/99 (20%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKF-VTPQKTEEKKGVSHIATPHPSKKSAKTPANN 196
TPKK SSKKR E+ K V KKAK VTPQKT+EKK
Sbjct: 161 TPKKPASSKKRANETTPKAPVSAKKAKVAVTPQKTDEKK-------------------KG 201
Query: 197 DQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
+ Q KS C SC ++F + L+SH KAKH A
Sbjct: 202 GKAANQSPKSASQVSCGSCKKTFNSGNALESHNKAKHAA 240
>gi|18407844|ref|NP_566872.1| histone deacetylase HDT1 [Arabidopsis thaliana]
gi|73919936|sp|Q9FVE6.1|HDT1_ARATH RecName: Full=Histone deacetylase HDT1; AltName: Full=HD-tuins
protein 1; AltName: Full=Histone deacetylase 2a
gi|11066135|gb|AAG28472.1|AF195545_1 putative histone deacetylase [Arabidopsis thaliana]
gi|17529220|gb|AAL38837.1| putative histone deacetylase [Arabidopsis thaliana]
gi|20466057|gb|AAM20363.1| putative histone deacetylase [Arabidopsis thaliana]
gi|332644423|gb|AEE77944.1| histone deacetylase HDT1 [Arabidopsis thaliana]
Length = 245
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 47/99 (47%), Gaps = 20/99 (20%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKF-VTPQKTEEKKGVSHIATPHPSKKSAKTPANN 196
TPKK SSKKR E+ K V KKAK VTPQKT+EKK
Sbjct: 164 TPKKPASSKKRANETTPKAPVSAKKAKVAVTPQKTDEKK-------------------KG 204
Query: 197 DQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
+ Q KS C SC ++F + L+SH KAKH A
Sbjct: 205 GKAANQSPKSASQVSCGSCKKTFNSGNALESHNKAKHAA 243
>gi|2392769|gb|AAB70032.1| putative histone deacetylase [Arabidopsis thaliana]
Length = 257
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 47/99 (47%), Gaps = 20/99 (20%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKF-VTPQKTEEKKGVSHIATPHPSKKSAKTPANN 196
TPKK SSKKR E+ K V KKAK VTPQKT+EKK
Sbjct: 164 TPKKPASSKKRANETTPKAPVSAKKAKVAVTPQKTDEKK-------------------KG 204
Query: 197 DQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
+ Q KS C SC ++F + L+SH KAKH A
Sbjct: 205 GKAANQSPKSASQVSCGSCKKTFNSGNALESHNKAKHAA 243
>gi|297815600|ref|XP_002875683.1| hypothetical protein ARALYDRAFT_484880 [Arabidopsis lyrata subsp.
lyrata]
gi|297321521|gb|EFH51942.1| hypothetical protein ARALYDRAFT_484880 [Arabidopsis lyrata subsp.
lyrata]
Length = 247
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 51/99 (51%), Gaps = 20/99 (20%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKF-VTPQKTEEKKGVSHIATPHPSKKSAKTPANN 196
TPKK S+KKR E+A KT V KKAK VTPQKT + I TP P+ +S
Sbjct: 167 TPKKPASNKKRANETAPKTPVSSKKAKVAVTPQKTGKD-----INTPKPATQSP------ 215
Query: 197 DQTKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
KS C SC ++F + L++H KAKH A
Sbjct: 216 --------KSASQVSCGSCKKTFNSGNALEAHNKAKHSA 246
>gi|413951577|gb|AFW84226.1| hypothetical protein ZEAMMB73_736560 [Zea mays]
Length = 285
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 14/106 (13%)
Query: 133 DEDEETPKKAES--SKKRPVESASKTYVPDKKAKF-VTPQKTEEKKGVSHIATPHPSKKS 189
+E TPKK E KKR +E+ + + KKAK + QKT +K ++T HP+K+S
Sbjct: 184 EEQTPTPKKTEVVVGKKRAIEAETPS---GKKAKSEQSAQKTGDK-----VSTSHPAKQS 235
Query: 190 AKTPANNDQ---TKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAK 232
+KTPA+ T + GS CKSC++SF + L+SH KAK
Sbjct: 236 SKTPADKSTKTPTADKKSPKSGSHACKSCSKSFGSASALESHQKAK 281
>gi|242059621|ref|XP_002458956.1| hypothetical protein SORBIDRAFT_03g043350 [Sorghum bicolor]
gi|241930931|gb|EES04076.1| hypothetical protein SORBIDRAFT_03g043350 [Sorghum bicolor]
Length = 277
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 13/105 (12%)
Query: 133 DEDEETPKKAES--SKKRPVESASKTYVPDKKAKF-VTPQKTEEKKGVSHIATPHPSKKS 189
+E TPKK + KKR +++ + + KKAK + QKT +KK + H +K+S
Sbjct: 177 EEQTPTPKKTDVVVGKKRAIQAEAPS---GKKAKSEQSAQKTGDKK-----VSTHSAKQS 228
Query: 190 AKTPANNDQTKQQPHKS--GGSFPCKSCNRSFTTEGGLQSHTKAK 232
+KTP + +T KS GS CKSCN+SF++ GL+SH KAK
Sbjct: 229 SKTPDKSTKTPTADKKSPKSGSHACKSCNKSFSSATGLESHQKAK 273
>gi|218189577|gb|EEC72004.1| hypothetical protein OsI_04865 [Oryza sativa Indica Group]
Length = 349
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 69/153 (45%), Gaps = 35/153 (22%)
Query: 93 SDDENPNLVNRDGSSDESSGELDESDDDE------DDEGTD--ESESDDE---------- 134
+DD+N N ES+G D SDD + D+E T E ES DE
Sbjct: 204 ADDDNNERYNDISVVSESTGNEDSSDDADYEGKSSDEEETTAKEGESTDEKETPAKEGES 263
Query: 135 --DEETPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGV------SH--IATPH 184
+EETP K + PV + KT+ P + AK P T+ K G SH + PH
Sbjct: 264 SDEEETPAKNTKEENEPVVTPLKTF-PHEMAKIEAPI-TDNKTGTNTSKRGSHLQVTNPH 321
Query: 185 PSKKSAKTPANNDQTKQQPHKSGGSFPCKSCNR 217
P+K++ +TP ND K+ S+ C SC +
Sbjct: 322 PAKQAKRTPIKNDTPKR-----SASYVCNSCKK 349
>gi|168000925|ref|XP_001753166.1| HD2 type histone deacetylase [Physcomitrella patens subsp. patens]
gi|162695865|gb|EDQ82207.1| HD2 type histone deacetylase [Physcomitrella patens subsp. patens]
Length = 444
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 50/113 (44%), Gaps = 19/113 (16%)
Query: 137 ETPKKAESSKKRPVESASKTYVPDKKAKF-VTPQKTEEKKGVSHIATPHPSKKSAKTPAN 195
ETPK + KKRP +A V DKK+K +P + KG PSK + KTP +
Sbjct: 337 ETPK---AGKKRP--AAEPLKVADKKSKTDSSPLQAAAAKGTKGEKQVTPSKDAPKTPTD 391
Query: 196 NDQTKQQP-------------HKSGGSFPCKSCNRSFTTEGGLQSHTKAKHGA 235
+ P K G + C C+R+FTTE + H AKH A
Sbjct: 392 KGAKAKAPKGTPTAPPTTPVSEKKFGQYKCTGCDRTFTTESAMSQHVAAKHKA 444
>gi|222619727|gb|EEE55859.1| hypothetical protein OsJ_04488 [Oryza sativa Japonica Group]
Length = 335
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 29/155 (18%)
Query: 85 SSSDDDETSDDENPNLVNRDGSSDESSGELDESDDDEDDEGTD--ESESDDE-------- 134
S +DDD + ++V +++SS + D D+E T E ES DE
Sbjct: 188 SKADDDNNERYRDISVVGESTGNEDSSDDADYEGKSSDEEETTAKEGESTDEKETPAKEG 247
Query: 135 ----DEETPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGV------SH--IAT 182
+EETP K + PV + KT+ P + AK P T+ K G SH +
Sbjct: 248 ESSDEEETPAKNTKEENEPVVTPLKTF-PHEMAKIEAPI-TDNKTGTNTSKRGSHLQVTN 305
Query: 183 PHPSKKSAKTPANNDQTKQQPHKSGGSFPCKSCNR 217
PHP+K++ +TP ND K+ S+ C SC +
Sbjct: 306 PHPAKQAKRTPIKNDTPKRS-----ASYVCNSCKK 335
>gi|125573047|gb|EAZ14562.1| hypothetical protein OsJ_04484 [Oryza sativa Japonica Group]
Length = 273
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 21/80 (26%)
Query: 138 TPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANND 197
TP A+ +KK PV + ++ G H+ATP+P+K++ K ANND
Sbjct: 215 TPYPAKQAKKTPVNN----------------DMAKQSSGYVHVATPYPAKQAKKRTANND 258
Query: 198 QTKQQPHKSGGSFPCKSCNR 217
++ H +G + CK CN+
Sbjct: 259 MSE---HSAG--YACKPCNK 273
>gi|116794397|gb|ABK27129.1| unknown [Picea sitchensis]
Length = 355
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 55/126 (43%), Gaps = 30/126 (23%)
Query: 134 EDEETPKKAESSKKRPV-ESASKTYVPDKKAKFVTPQKTEE------KKGVSHIATPHPS 186
++ + PK S KKRP+ +S+ K+ DKKAK VTP + KKG P S
Sbjct: 235 KNRKMPKVESSGKKRPLPDSSIKSPGTDKKAK-VTPGGAQNQGTDGGKKG-----GPKIS 288
Query: 187 KKSAKTPANNDQT---------KQQPH--------KSGGSFPCKSCNRSFTTEGGLQSHT 229
+ P+N QT K+ P K G C +C R+F TE L H
Sbjct: 289 VSKEQIPSNKGQTPKAKGGVGAKESPKPSTTPGSGKKIGQHVCNTCTRNFATESALTQHN 348
Query: 230 KAKHGA 235
AKHG
Sbjct: 349 AAKHGG 354
>gi|224162394|ref|XP_002338439.1| hypothetical protein POPTRDRAFT_582808 [Populus trichocarpa]
gi|222872327|gb|EEF09458.1| hypothetical protein POPTRDRAFT_582808 [Populus trichocarpa]
Length = 52
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 28/36 (77%)
Query: 136 EETPKKAESSKKRPVESASKTYVPDKKAKFVTPQKT 171
EETPKKAE+SKKR +SA+KT V KKAK TP KT
Sbjct: 16 EETPKKAETSKKRATDSATKTPVSSKKAKTATPLKT 51
>gi|413951578|gb|AFW84227.1| hypothetical protein ZEAMMB73_736560 [Zea mays]
Length = 281
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 18/106 (16%)
Query: 133 DEDEETPKKAES--SKKRPVESASKTYVPDKKAKF-VTPQKTEEKKGVSHIATPHPSKKS 189
+E TPKK E KKR +E+ + + KKAK + QKT +K ++T HP+K+S
Sbjct: 184 EEQTPTPKKTEVVVGKKRAIEAETPS---GKKAKSEQSAQKTGDK-----VSTSHPAKQS 235
Query: 190 AKTPANNDQ---TKQQPHKSGGSFPCKSCNRSFTTEGGLQSHTKAK 232
+KTPA+ T + GS CKSC+ + L+SH KAK
Sbjct: 236 SKTPADKSTKTPTADKKSPKSGSHACKSCSNA----SALESHQKAK 277
>gi|76573369|gb|ABA46789.1| unknown [Solanum tuberosum]
Length = 313
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 136 EETPKKAESSKKRPVESASKTYVPDKKAKFVTP-QKTEEKKGVSHIATPHPSKKSAKTPA 194
EETPKK E KKRP S KKAK VTP K+ KKG ATP +K++ K
Sbjct: 167 EETPKKVE-QKKRPAPSPKVAPGSGKKAKQVTPDNKSGGKKGP---ATPF-AKQNGKPAF 221
Query: 195 N-NDQTKQQPHKSGGSFPC-KSCNRSFTTEGGLQSHTK 230
N N++TK Q KSGG F KS N++F+ + Q +
Sbjct: 222 NGNNKTKNQSPKSGGQFSGNKSNNKNFSGQKQFQGQAR 259
>gi|357517267|ref|XP_003628922.1| Pleiotropic drug resistance protein [Medicago truncatula]
gi|355522944|gb|AET03398.1| Pleiotropic drug resistance protein [Medicago truncatula]
Length = 817
Score = 36.6 bits (83), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 67/132 (50%), Gaps = 24/132 (18%)
Query: 103 RDGSSDESSGELDESDDDEDD----EGTDESESDDEDEETP-KKAESSKKRPVESASKTY 157
+D SDES E+ SDD+ ++ ++ +D++EETP KK + KKRP ESASKT
Sbjct: 538 KDEDSDESDNEIGSSDDEMENADSDSQDEDESDEDDEEETPVKKVDQGKKRPNESASKTP 597
Query: 158 VPDKKAKFVTPQKTE----EKKGVS-HIATPHPSKK-------SAKTPANN-----DQTK 200
V KK K TP+KTE E VS PH K+ SA PA + Q K
Sbjct: 598 V-SKKTKNATPEKTEHYLQEHCEVSKKYPAPHGLKQQFAADDSSAYVPAASVIAEPHQIK 656
Query: 201 QQPHKSGGSFPC 212
QP S G F C
Sbjct: 657 WQPPAS-GRFKC 667
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.298 0.119 0.324
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,095,892,848
Number of Sequences: 23463169
Number of extensions: 193101649
Number of successful extensions: 3927024
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 26681
Number of HSP's successfully gapped in prelim test: 59111
Number of HSP's that attempted gapping in prelim test: 2156645
Number of HSP's gapped (non-prelim): 709427
length of query: 237
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 99
effective length of database: 9,121,278,045
effective search space: 903006526455
effective search space used: 903006526455
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (22.0 bits)
S2: 74 (33.1 bits)