Query 044542
Match_columns 465
No_of_seqs 377 out of 1938
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 07:00:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044542.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044542hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fro_A GLGA glycogen synthase; 100.0 1.1E-46 3.8E-51 372.6 32.5 367 78-464 1-434 (439)
2 3okp_A GDP-mannose-dependent a 100.0 1.2E-46 4.1E-51 367.1 29.2 353 78-463 3-382 (394)
3 3c48_A Predicted glycosyltrans 100.0 8.3E-46 2.9E-50 366.4 35.5 367 76-463 17-428 (438)
4 2r60_A Glycosyl transferase, g 100.0 1.7E-45 5.9E-50 370.1 26.6 373 79-463 7-462 (499)
5 1rzu_A Glycogen synthase 1; gl 100.0 1.6E-44 5.4E-49 361.9 22.6 371 80-463 1-478 (485)
6 2jjm_A Glycosyl transferase, g 100.0 8.3E-43 2.8E-47 340.0 32.0 345 80-463 14-388 (394)
7 2gek_A Phosphatidylinositol ma 100.0 4.3E-43 1.5E-47 343.3 29.2 347 76-464 17-387 (406)
8 2qzs_A Glycogen synthase; glyc 100.0 1.6E-43 5.5E-48 354.6 24.8 371 80-463 1-479 (485)
9 3vue_A GBSS-I, granule-bound s 100.0 5.6E-43 1.9E-47 350.8 27.3 373 77-461 7-512 (536)
10 2x6q_A Trehalose-synthase TRET 100.0 1.6E-43 5.5E-48 347.6 22.4 344 76-461 37-415 (416)
11 3oy2_A Glycosyltransferase B73 100.0 2.4E-43 8.1E-48 346.1 23.2 336 80-463 1-393 (413)
12 3s28_A Sucrose synthase 1; gly 100.0 1E-41 3.6E-46 351.9 29.8 369 77-460 276-769 (816)
13 2iw1_A Lipopolysaccharide core 100.0 4.1E-42 1.4E-46 332.6 24.8 347 80-462 1-373 (374)
14 2iuy_A Avigt4, glycosyltransfe 100.0 5.4E-42 1.8E-46 327.8 18.7 308 77-463 1-338 (342)
15 2x0d_A WSAF; GT4 family, trans 100.0 3.1E-39 1.1E-43 314.5 18.7 339 77-463 44-412 (413)
16 2vsy_A XCC0866; transferase, g 100.0 1.4E-33 4.6E-38 288.1 23.2 325 76-463 202-562 (568)
17 2hy7_A Glucuronosyltransferase 100.0 7.5E-34 2.6E-38 276.8 17.7 312 77-461 12-380 (406)
18 1f0k_A MURG, UDP-N-acetylgluco 100.0 5E-33 1.7E-37 267.9 19.2 312 79-461 6-358 (364)
19 3beo_A UDP-N-acetylglucosamine 100.0 3.8E-33 1.3E-37 269.8 16.0 334 79-458 8-374 (375)
20 1vgv_A UDP-N-acetylglucosamine 100.0 1.1E-33 3.9E-38 274.4 9.9 341 80-462 1-378 (384)
21 3nb0_A Glycogen [starch] synth 100.0 4.2E-30 1.4E-34 253.6 19.9 300 153-462 179-635 (725)
22 1uqt_A Alpha, alpha-trehalose- 100.0 1.4E-29 4.6E-34 249.5 21.3 200 251-460 218-454 (482)
23 2bfw_A GLGA glycogen synthase; 100.0 8.7E-30 3E-34 223.7 17.1 182 257-445 2-200 (200)
24 3qhp_A Type 1 capsular polysac 100.0 7.2E-28 2.5E-32 204.8 16.9 158 287-452 2-166 (166)
25 1v4v_A UDP-N-acetylglucosamine 100.0 3.4E-28 1.2E-32 235.1 16.8 331 79-461 5-365 (376)
26 3t5t_A Putative glycosyltransf 100.0 1.5E-26 5.2E-31 224.8 24.4 276 154-460 148-473 (496)
27 2xci_A KDO-transferase, 3-deox 99.9 1.1E-26 3.6E-31 223.5 13.4 299 81-445 42-365 (374)
28 2f9f_A First mannosyl transfer 99.9 2.7E-25 9.2E-30 190.8 12.6 140 280-428 17-165 (177)
29 3rhz_A GTF3, nucleotide sugar 99.9 2.6E-23 8.8E-28 195.4 24.4 301 79-451 10-327 (339)
30 3dzc_A UDP-N-acetylglucosamine 99.9 2.6E-24 8.8E-29 208.3 12.2 335 77-457 23-394 (396)
31 3ot5_A UDP-N-acetylglucosamine 99.9 1.7E-23 5.7E-28 202.8 17.1 336 77-457 25-392 (403)
32 3otg_A CALG1; calicheamicin, T 99.9 9E-23 3.1E-27 199.6 16.8 330 76-459 17-409 (412)
33 3s2u_A UDP-N-acetylglucosamine 99.9 3.2E-20 1.1E-24 177.8 22.4 316 81-460 4-358 (365)
34 2iyf_A OLED, oleandomycin glyc 99.8 5.3E-20 1.8E-24 180.9 21.2 341 78-459 6-400 (430)
35 4fzr_A SSFS6; structural genom 99.8 3.4E-20 1.2E-24 180.3 16.1 155 285-455 226-397 (398)
36 3tsa_A SPNG, NDP-rhamnosyltran 99.8 5.9E-20 2E-24 178.2 16.0 163 284-458 216-388 (391)
37 3ia7_A CALG4; glycosysltransfe 99.8 1.4E-17 5E-22 161.9 22.0 345 79-460 4-400 (402)
38 4hwg_A UDP-N-acetylglucosamine 99.8 3E-19 1E-23 171.4 8.1 334 78-458 8-375 (385)
39 3oti_A CALG3; calicheamicin, T 99.8 3.2E-17 1.1E-21 159.3 22.6 158 284-457 230-396 (398)
40 3rsc_A CALG2; TDP, enediyne, s 99.8 8.6E-17 2.9E-21 157.2 22.3 161 285-459 246-414 (415)
41 2p6p_A Glycosyl transferase; X 99.7 2.6E-16 8.8E-21 152.1 19.6 157 285-458 209-379 (384)
42 2yjn_A ERYCIII, glycosyltransf 99.7 6.2E-15 2.1E-19 145.1 20.3 159 284-458 265-435 (441)
43 3q3e_A HMW1C-like glycosyltran 99.6 5E-15 1.7E-19 146.2 17.5 325 78-462 274-629 (631)
44 2iya_A OLEI, oleandomycin glyc 99.6 2.5E-13 8.5E-18 132.9 25.2 161 285-459 254-422 (424)
45 4amg_A Snogd; transferase, pol 99.5 1.2E-13 4.3E-18 133.9 16.6 160 283-456 234-398 (400)
46 1iir_A Glycosyltransferase GTF 99.4 4.1E-12 1.4E-16 123.9 17.6 151 287-456 239-398 (415)
47 3h4t_A Glycosyltransferase GTF 99.4 7E-12 2.4E-16 121.7 15.3 156 285-458 220-382 (404)
48 4gyw_A UDP-N-acetylglucosamine 99.3 1E-10 3.6E-15 120.9 22.9 181 275-461 512-706 (723)
49 2o6l_A UDP-glucuronosyltransfe 99.3 2.7E-12 9.3E-17 108.6 8.2 130 285-430 20-159 (170)
50 1rrv_A Glycosyltransferase GTF 99.3 3.2E-11 1.1E-15 117.5 14.0 134 287-438 238-382 (416)
51 1l5w_A Maltodextrin phosphoryl 99.0 1E-09 3.4E-14 110.9 11.2 232 224-462 409-732 (796)
52 2c4m_A Glycogen phosphorylase; 99.0 1.3E-09 4.6E-14 110.0 11.5 231 224-462 398-721 (796)
53 2gj4_A Glycogen phosphorylase, 99.0 3.5E-09 1.2E-13 107.4 14.2 230 224-461 433-755 (824)
54 3hbf_A Flavonoid 3-O-glucosylt 98.6 2.1E-05 7.2E-10 76.5 24.2 203 224-439 211-427 (454)
55 2acv_A Triterpene UDP-glucosyl 98.6 1.8E-05 6.2E-10 77.6 24.1 131 284-424 274-425 (463)
56 2vch_A Hydroquinone glucosyltr 98.5 0.00027 9.1E-09 69.6 31.1 131 285-424 267-429 (480)
57 1psw_A ADP-heptose LPS heptosy 98.5 3.2E-06 1.1E-10 79.8 16.2 107 274-388 168-286 (348)
58 3hbm_A UDP-sugar hydrolase; PS 98.4 1.2E-06 4.1E-11 79.4 9.9 91 287-390 158-252 (282)
59 3l7i_A Teichoic acid biosynthe 97.8 9.8E-05 3.4E-09 76.9 11.8 188 224-424 474-683 (729)
60 2c1x_A UDP-glucose flavonoid 3 97.8 0.00027 9.1E-09 69.1 14.1 198 225-440 210-426 (456)
61 2pq6_A UDP-glucuronosyl/UDP-gl 97.8 0.00059 2E-08 67.2 16.2 147 285-442 294-455 (482)
62 2jzc_A UDP-N-acetylglucosamine 97.6 9E-05 3.1E-09 64.3 7.1 76 339-423 115-198 (224)
63 3tov_A Glycosyl transferase fa 96.8 0.0039 1.3E-07 58.5 9.2 104 278-389 177-287 (349)
64 2gt1_A Lipopolysaccharide hept 96.3 0.015 5.1E-07 53.9 9.6 130 286-424 178-322 (326)
65 1ygp_A Yeast glycogen phosphor 95.8 0.069 2.4E-06 54.5 11.7 127 287-414 600-766 (879)
66 3ty2_A 5'-nucleotidase SURE; s 93.8 0.25 8.6E-06 43.2 8.5 45 76-128 8-52 (261)
67 1xv5_A AGT, DNA alpha-glucosyl 92.8 3.6 0.00012 34.2 28.1 336 80-455 2-397 (401)
68 2phj_A 5'-nucleotidase SURE; S 91.2 0.69 2.4E-05 40.3 7.9 42 79-128 1-42 (251)
69 4g65_A TRK system potassium up 89.2 3.6 0.00012 39.7 12.0 121 299-423 218-366 (461)
70 4gi5_A Quinone reductase; prot 86.4 1.1 3.9E-05 39.9 6.0 45 75-123 18-63 (280)
71 2wqk_A 5'-nucleotidase SURE; S 84.5 3.1 0.00011 36.4 7.8 41 80-128 2-42 (251)
72 4b4o_A Epimerase family protei 82.7 1.3 4.4E-05 39.9 4.8 34 80-123 1-34 (298)
73 1kjn_A MTH0777; hypotethical p 81.7 3.7 0.00013 32.1 6.2 42 77-122 4-45 (157)
74 1j9j_A Stationary phase surviV 80.6 4.4 0.00015 35.3 7.1 40 80-127 1-40 (247)
75 2q62_A ARSH; alpha/beta, flavo 80.4 5.4 0.00018 34.8 7.8 51 69-123 24-75 (247)
76 2hy5_A Putative sulfurtransfer 79.5 4 0.00014 31.5 6.1 42 80-124 1-43 (130)
77 1tvm_A PTS system, galactitol- 79.3 12 0.00041 27.9 8.5 43 76-123 18-60 (113)
78 2v4n_A Multifunctional protein 79.2 6 0.0002 34.5 7.5 41 79-127 1-41 (254)
79 3f6r_A Flavodoxin; FMN binding 78.4 3.9 0.00013 32.2 5.8 39 80-123 2-40 (148)
80 2a5l_A Trp repressor binding p 78.2 4.1 0.00014 34.0 6.2 40 79-123 5-44 (200)
81 2d1p_A TUSD, hypothetical UPF0 76.9 5.3 0.00018 31.3 6.0 44 78-124 11-55 (140)
82 3hly_A Flavodoxin-like domain; 75.9 4.8 0.00016 32.4 5.7 39 80-123 1-39 (161)
83 3nbm_A PTS system, lactose-spe 75.1 6.1 0.00021 29.4 5.6 40 77-122 4-43 (108)
84 3kcn_A Adenylate cyclase homol 74.3 28 0.00095 26.8 10.1 77 348-424 36-123 (151)
85 1ydg_A Trp repressor binding p 72.9 7.4 0.00025 32.7 6.5 41 78-123 5-45 (211)
86 3sxp_A ADP-L-glycero-D-mannohe 69.8 6.2 0.00021 36.4 5.7 40 75-124 6-47 (362)
87 1f4p_A Flavodoxin; electron tr 69.1 5.7 0.0002 31.1 4.6 38 80-122 1-38 (147)
88 3jte_A Response regulator rece 68.5 33 0.0011 25.9 9.1 77 348-424 36-123 (143)
89 2pq6_A UDP-glucuronosyl/UDP-gl 68.5 4.9 0.00017 39.1 4.8 39 79-123 8-46 (482)
90 2ark_A Flavodoxin; FMN, struct 68.1 13 0.00046 30.5 6.9 40 79-123 4-44 (188)
91 3tem_A Ribosyldihydronicotinam 67.2 9.6 0.00033 32.7 6.0 41 80-124 2-43 (228)
92 3gpi_A NAD-dependent epimerase 67.1 10 0.00036 33.4 6.5 35 79-124 3-37 (286)
93 3b6i_A Flavoprotein WRBA; flav 67.1 11 0.00037 31.2 6.2 40 80-124 2-42 (198)
94 3mc3_A DSRE/DSRF-like family p 66.9 12 0.00041 28.9 5.9 43 79-124 15-57 (134)
95 3c97_A Signal transduction his 66.6 39 0.0013 25.5 10.3 76 349-424 44-130 (140)
96 3dfu_A Uncharacterized protein 66.5 4.9 0.00017 34.6 3.9 36 75-121 2-37 (232)
97 3ilh_A Two component response 65.9 28 0.00097 26.4 8.2 77 348-424 44-139 (146)
98 1k68_A Phytochrome response re 65.9 39 0.0013 25.2 9.1 77 348-424 37-131 (140)
99 1jx7_A Hypothetical protein YC 65.5 11 0.00037 28.1 5.4 42 80-124 2-45 (117)
100 2zki_A 199AA long hypothetical 65.4 9.9 0.00034 31.5 5.6 39 79-123 4-42 (199)
101 3ew7_A LMO0794 protein; Q8Y8U8 65.1 6.5 0.00022 33.1 4.5 34 80-123 1-34 (221)
102 3mcu_A Dipicolinate synthase, 65.0 5.5 0.00019 33.6 3.8 39 79-125 5-45 (207)
103 2vzf_A NADH-dependent FMN redu 64.9 12 0.00041 31.1 6.0 42 79-123 2-44 (197)
104 3ehd_A Uncharacterized conserv 64.5 21 0.00073 28.6 7.0 69 353-422 65-161 (162)
105 2e6c_A 5'-nucleotidase SURE; S 64.0 6.9 0.00024 33.9 4.3 40 80-127 1-40 (244)
106 3lqk_A Dipicolinate synthase s 63.5 8.7 0.0003 32.2 4.8 42 77-125 5-47 (201)
107 4huj_A Uncharacterized protein 63.4 4.9 0.00017 34.3 3.3 45 67-122 11-55 (220)
108 2zay_A Response regulator rece 63.0 47 0.0016 25.2 10.1 76 349-424 42-128 (147)
109 3heb_A Response regulator rece 62.9 32 0.0011 26.5 8.0 103 319-423 5-134 (152)
110 3n7t_A Macrophage binding prot 62.9 14 0.00048 32.1 6.2 46 79-124 9-59 (247)
111 3h2s_A Putative NADH-flavin re 62.9 7.2 0.00025 32.9 4.4 34 80-123 1-34 (224)
112 4hs4_A Chromate reductase; tri 62.4 7.2 0.00025 32.7 4.1 37 77-117 4-40 (199)
113 3cg4_A Response regulator rece 61.4 49 0.0017 24.8 9.7 76 349-424 41-127 (142)
114 1hdo_A Biliverdin IX beta redu 61.2 9.1 0.00031 31.7 4.7 34 80-123 4-37 (206)
115 2iz6_A Molybdenum cofactor car 60.6 4 0.00014 33.5 2.1 68 354-424 104-174 (176)
116 1sqs_A Conserved hypothetical 60.6 17 0.00059 31.3 6.4 40 80-123 2-43 (242)
117 1l5x_A SurviVal protein E; str 60.1 8.7 0.0003 34.0 4.3 40 80-127 1-40 (280)
118 3grc_A Sensor protein, kinase; 60.1 52 0.0018 24.7 9.9 76 349-424 40-127 (140)
119 3kkl_A Probable chaperone prot 59.9 17 0.00059 31.4 6.2 46 79-124 3-53 (244)
120 3rpe_A MDAB, modulator of drug 59.8 10 0.00035 32.3 4.6 46 76-122 22-69 (218)
121 3fni_A Putative diflavin flavo 59.4 24 0.00082 28.1 6.6 39 80-123 5-43 (159)
122 3hzh_A Chemotaxis response reg 58.7 41 0.0014 26.1 8.0 66 358-423 84-156 (157)
123 3f2v_A General stress protein 58.7 4.6 0.00016 33.7 2.2 40 79-123 1-40 (192)
124 1t5b_A Acyl carrier protein ph 58.3 17 0.00057 30.1 5.8 40 80-123 2-45 (201)
125 1rcu_A Conserved hypothetical 58.2 6.5 0.00022 32.8 3.0 68 351-421 112-192 (195)
126 3hdg_A Uncharacterized protein 58.2 55 0.0019 24.4 8.9 76 349-424 41-125 (137)
127 3vps_A TUNA, NAD-dependent epi 58.1 7.7 0.00026 34.9 3.9 36 79-124 7-42 (321)
128 3dhn_A NAD-dependent epimerase 58.1 11 0.00036 31.9 4.6 36 79-124 4-39 (227)
129 3dqp_A Oxidoreductase YLBE; al 58.0 8.6 0.00029 32.4 4.0 35 80-124 1-35 (219)
130 2l2q_A PTS system, cellobiose- 57.8 12 0.0004 27.8 4.2 40 78-123 3-42 (109)
131 2c5a_A GDP-mannose-3', 5'-epim 57.7 14 0.00049 34.2 5.8 37 78-124 28-64 (379)
132 4f3y_A DHPR, dihydrodipicolina 57.3 10 0.00035 33.5 4.3 59 349-409 65-128 (272)
133 1sbz_A Probable aromatic acid 57.3 14 0.00049 30.7 5.0 37 80-123 1-38 (197)
134 2hpv_A FMN-dependent NADH-azor 56.4 15 0.00053 30.6 5.3 39 80-122 2-45 (208)
135 1lss_A TRK system potassium up 56.3 14 0.00047 28.2 4.6 33 79-122 4-36 (140)
136 1qkk_A DCTD, C4-dicarboxylate 56.3 66 0.0022 24.7 9.0 67 358-424 48-121 (155)
137 3zqu_A Probable aromatic acid 56.2 17 0.00058 30.6 5.3 37 80-123 5-41 (209)
138 2hna_A Protein MIOC, flavodoxi 56.2 11 0.00037 29.5 4.0 36 80-120 2-37 (147)
139 1wcv_1 SOJ, segregation protei 56.0 15 0.0005 32.0 5.2 43 77-123 3-45 (257)
140 3qvo_A NMRA family protein; st 56.0 11 0.00036 32.4 4.2 27 95-124 32-59 (236)
141 3e8x_A Putative NAD-dependent 56.0 11 0.00039 32.0 4.5 37 77-123 19-55 (236)
142 2fzv_A Putative arsenical resi 55.9 26 0.00089 31.0 6.7 43 77-123 56-99 (279)
143 3gl9_A Response regulator; bet 55.9 57 0.0019 23.8 8.9 75 349-423 36-121 (122)
144 1e2b_A Enzyme IIB-cellobiose; 55.7 20 0.00067 26.4 5.0 41 78-124 2-42 (106)
145 3svl_A Protein YIEF; E. coli C 55.5 6.6 0.00023 32.7 2.7 41 78-122 3-44 (193)
146 4dzz_A Plasmid partitioning pr 55.3 21 0.00071 29.5 5.9 40 80-123 1-40 (206)
147 3gt7_A Sensor protein; structu 55.3 18 0.00061 28.2 5.2 37 74-120 2-38 (154)
148 1d4a_A DT-diaphorase, quinone 55.3 27 0.00092 30.8 6.8 42 79-124 2-44 (273)
149 3nhm_A Response regulator; pro 55.1 61 0.0021 23.9 10.9 76 349-424 37-122 (133)
150 3lcm_A SMU.1420, putative oxid 55.0 23 0.0008 29.3 6.1 40 80-124 1-41 (196)
151 2hy5_B Intracellular sulfur ox 54.8 25 0.00085 27.2 5.7 43 79-124 4-47 (136)
152 2x4g_A Nucleoside-diphosphate- 54.8 13 0.00045 33.7 4.9 35 79-123 13-47 (342)
153 2qzj_A Two-component response 54.7 49 0.0017 24.8 7.6 76 349-424 38-121 (136)
154 3gt7_A Sensor protein; structu 54.6 71 0.0024 24.5 9.2 76 349-424 41-127 (154)
155 2rdm_A Response regulator rece 54.2 62 0.0021 23.8 9.4 76 347-424 37-123 (132)
156 3q0i_A Methionyl-tRNA formyltr 54.2 14 0.00049 33.4 4.9 95 78-183 6-115 (318)
157 2rdm_A Response regulator rece 54.2 24 0.00082 26.3 5.7 36 75-120 1-36 (132)
158 3cg4_A Response regulator rece 54.2 21 0.00071 27.1 5.4 36 75-120 3-38 (142)
159 3s5p_A Ribose 5-phosphate isom 54.1 25 0.00084 28.2 5.6 42 74-123 16-57 (166)
160 1ykg_A SIR-FP, sulfite reducta 53.9 7.4 0.00025 31.4 2.7 39 79-122 9-47 (167)
161 3hdv_A Response regulator; PSI 53.1 67 0.0023 23.8 8.6 105 318-424 7-127 (136)
162 1i3c_A Response regulator RCP1 53.1 73 0.0025 24.2 9.4 67 357-423 61-136 (149)
163 3fgn_A Dethiobiotin synthetase 53.0 19 0.00067 31.3 5.4 42 76-121 22-63 (251)
164 1k66_A Phytochrome response re 52.9 71 0.0024 24.0 8.7 67 358-424 63-138 (149)
165 1qzu_A Hypothetical protein MD 52.8 13 0.00044 31.3 4.0 42 76-124 16-58 (206)
166 3eod_A Protein HNR; response r 52.6 27 0.00091 26.0 5.7 35 75-119 3-37 (130)
167 3bfv_A CAPA1, CAPB2, membrane 52.4 25 0.00085 30.9 6.1 49 71-123 73-121 (271)
168 3eul_A Possible nitrate/nitrit 52.2 76 0.0026 24.2 10.4 76 349-424 51-135 (152)
169 4em8_A Ribose 5-phosphate isom 52.2 22 0.00075 27.9 4.9 39 77-123 5-43 (148)
170 3t6k_A Response regulator rece 52.2 71 0.0024 23.8 9.7 76 349-424 38-124 (136)
171 3h5i_A Response regulator/sens 52.1 22 0.00074 27.0 5.2 35 76-120 2-36 (140)
172 3snk_A Response regulator CHEY 52.1 41 0.0014 25.1 6.8 34 78-121 13-47 (135)
173 2qsj_A DNA-binding response re 52.0 77 0.0026 24.2 8.9 77 348-424 38-124 (154)
174 3tqr_A Phosphoribosylglycinami 52.0 18 0.00061 30.7 4.8 99 76-183 2-113 (215)
175 3d7l_A LIN1944 protein; APC893 51.9 15 0.00053 30.2 4.5 35 78-123 2-36 (202)
176 3i6i_A Putative leucoanthocyan 51.5 11 0.00036 34.6 3.7 37 77-123 8-44 (346)
177 3eag_A UDP-N-acetylmuramate:L- 51.2 43 0.0015 30.3 7.7 71 79-163 4-74 (326)
178 3c3m_A Response regulator rece 51.2 74 0.0025 23.8 8.7 76 349-424 37-123 (138)
179 3ic5_A Putative saccharopine d 50.6 24 0.00083 25.7 5.1 33 79-122 5-38 (118)
180 3qsg_A NAD-binding phosphogluc 50.5 8.4 0.00029 34.8 2.8 38 74-122 19-57 (312)
181 2xj4_A MIPZ; replication, cell 50.0 25 0.00084 31.1 5.8 41 79-123 3-43 (286)
182 1y1p_A ARII, aldehyde reductas 49.9 20 0.00068 32.4 5.3 36 77-122 9-44 (342)
183 1t0i_A YLR011WP; FMN binding p 49.9 30 0.001 28.3 6.0 41 80-123 1-47 (191)
184 2fb6_A Conserved hypothetical 49.8 19 0.00064 27.1 4.2 41 80-124 8-50 (117)
185 3ruf_A WBGU; rossmann fold, UD 49.3 11 0.00039 34.3 3.6 38 77-124 23-60 (351)
186 3cnb_A DNA-binding response re 49.3 79 0.0027 23.5 9.9 76 349-424 44-130 (143)
187 3kjh_A CO dehydrogenase/acetyl 49.1 14 0.00048 31.7 3.9 39 80-124 1-39 (254)
188 3of5_A Dethiobiotin synthetase 49.1 23 0.00078 30.3 5.2 40 78-121 2-41 (228)
189 3l4b_C TRKA K+ channel protien 48.8 18 0.00062 30.4 4.5 33 80-123 1-33 (218)
190 3qjg_A Epidermin biosynthesis 48.6 17 0.00059 29.6 4.0 38 80-124 6-43 (175)
191 3auf_A Glycinamide ribonucleot 48.5 10 0.00036 32.5 2.8 97 78-183 21-131 (229)
192 1mb3_A Cell division response 48.3 75 0.0026 23.0 8.7 76 349-424 35-121 (124)
193 1r5j_A Putative phosphotransac 48.1 4.1 0.00014 37.4 0.2 78 280-380 202-293 (337)
194 3p0r_A Azoreductase; structura 48.0 28 0.00095 29.2 5.5 41 79-123 4-49 (211)
195 3g0o_A 3-hydroxyisobutyrate de 47.9 14 0.00048 33.1 3.8 36 76-122 4-39 (303)
196 3pfb_A Cinnamoyl esterase; alp 47.9 35 0.0012 29.0 6.5 42 80-125 46-87 (270)
197 3doj_A AT3G25530, dehydrogenas 47.9 15 0.00052 33.1 4.0 36 76-122 18-53 (310)
198 3r6w_A FMN-dependent NADH-azor 47.9 29 0.00099 29.0 5.6 42 79-124 1-46 (212)
199 1rtt_A Conserved hypothetical 47.7 14 0.00048 30.5 3.5 39 79-122 6-45 (193)
200 1bvy_F Protein (cytochrome P45 47.7 18 0.00062 29.9 4.1 40 79-123 21-60 (191)
201 4id9_A Short-chain dehydrogena 47.6 14 0.00049 33.6 3.9 39 76-124 16-54 (347)
202 2j48_A Two-component sensor ki 47.6 34 0.0011 24.5 5.5 74 349-423 35-117 (119)
203 1dbw_A Transcriptional regulat 47.5 79 0.0027 23.0 9.0 76 349-424 37-121 (126)
204 3ijp_A DHPR, dihydrodipicolina 47.5 14 0.00047 32.9 3.6 59 349-409 80-143 (288)
205 3h5i_A Response regulator/sens 47.4 86 0.003 23.4 11.1 78 347-424 37-124 (140)
206 1id1_A Putative potassium chan 47.4 18 0.00063 28.3 4.1 33 79-122 3-35 (153)
207 2rjn_A Response regulator rece 47.4 33 0.0011 26.5 5.6 35 76-120 4-38 (154)
208 2d1p_B TUSC, hypothetical UPF0 47.3 33 0.0011 25.7 5.3 41 81-124 3-43 (119)
209 2ejb_A Probable aromatic acid 47.3 30 0.001 28.5 5.4 36 81-123 3-38 (189)
210 4e7p_A Response regulator; DNA 47.0 92 0.0031 23.6 9.4 67 358-424 67-140 (150)
211 1sb8_A WBPP; epimerase, 4-epim 47.0 7.7 0.00026 35.6 1.9 37 77-123 25-61 (352)
212 3oh8_A Nucleoside-diphosphate 46.8 20 0.00067 35.0 5.0 37 79-125 147-183 (516)
213 2qvg_A Two component response 46.8 88 0.003 23.3 9.0 104 319-424 8-135 (143)
214 3k9g_A PF-32 protein; ssgcid, 46.7 25 0.00087 30.6 5.3 45 75-124 22-66 (267)
215 3slg_A PBGP3 protein; structur 46.5 15 0.00052 33.8 3.9 37 77-123 22-59 (372)
216 1xgk_A Nitrogen metabolite rep 46.4 17 0.00057 33.5 4.2 36 78-123 4-39 (352)
217 1rpn_A GDP-mannose 4,6-dehydra 46.2 20 0.00069 32.3 4.7 39 76-124 11-49 (335)
218 3ko8_A NAD-dependent epimerase 46.1 20 0.00067 32.0 4.5 34 80-123 1-34 (312)
219 2b69_A UDP-glucuronate decarbo 45.8 21 0.00072 32.4 4.8 37 77-123 25-61 (343)
220 1fjh_A 3alpha-hydroxysteroid d 45.7 21 0.00073 30.8 4.6 35 80-123 1-35 (257)
221 3i42_A Response regulator rece 45.4 35 0.0012 25.1 5.3 33 78-120 2-34 (127)
222 3r6d_A NAD-dependent epimerase 45.1 24 0.00082 29.6 4.7 36 79-123 4-40 (221)
223 3dtt_A NADP oxidoreductase; st 44.6 19 0.00064 31.1 4.0 37 76-123 16-52 (245)
224 3end_A Light-independent proto 44.4 27 0.00094 31.1 5.2 44 76-124 37-80 (307)
225 3h1g_A Chemotaxis protein CHEY 44.3 45 0.0015 24.7 5.8 68 357-424 51-127 (129)
226 2dkn_A 3-alpha-hydroxysteroid 44.2 23 0.00079 30.3 4.6 35 80-123 1-35 (255)
227 2a35_A Hypothetical protein PA 44.2 19 0.00063 30.0 3.8 36 79-124 5-42 (215)
228 3r0j_A Possible two component 44.1 1.5E+02 0.005 25.1 9.8 66 358-423 68-140 (250)
229 3n53_A Response regulator rece 44.1 97 0.0033 23.1 9.8 76 349-424 36-122 (140)
230 2qv0_A Protein MRKE; structura 44.1 98 0.0033 23.1 10.8 76 349-424 45-127 (143)
231 3k96_A Glycerol-3-phosphate de 44.1 14 0.00047 34.2 3.1 37 75-122 25-61 (356)
232 2z1m_A GDP-D-mannose dehydrata 43.8 23 0.00078 32.0 4.7 36 79-124 3-38 (345)
233 1jg7_A BGT, DNA beta-glucosylt 43.6 1.5E+02 0.005 24.9 26.0 145 288-442 182-333 (351)
234 2pzm_A Putative nucleotide sug 43.3 25 0.00086 31.7 4.8 38 76-123 17-54 (330)
235 3u7i_A FMN-dependent NADH-azor 43.1 51 0.0017 27.9 6.4 42 79-124 4-52 (223)
236 4egb_A DTDP-glucose 4,6-dehydr 43.1 22 0.00075 32.3 4.4 39 74-122 19-59 (346)
237 1cyd_A Carbonyl reductase; sho 42.9 28 0.00097 29.6 4.9 25 95-122 16-40 (244)
238 2rjn_A Response regulator rece 42.9 1.1E+02 0.0037 23.3 9.4 76 349-424 41-126 (154)
239 2i87_A D-alanine-D-alanine lig 42.9 10 0.00035 35.1 2.1 43 78-123 2-45 (364)
240 1jay_A Coenzyme F420H2:NADP+ o 42.7 25 0.00084 29.3 4.4 33 80-122 1-33 (212)
241 3lua_A Response regulator rece 42.7 32 0.0011 26.0 4.7 67 358-424 51-127 (140)
242 2h54_A Caspase-1; allosteric s 42.7 67 0.0023 26.1 6.7 43 80-122 43-87 (178)
243 2prs_A High-affinity zinc upta 42.7 55 0.0019 28.9 6.8 109 350-462 41-174 (284)
244 2c20_A UDP-glucose 4-epimerase 42.4 25 0.00086 31.6 4.7 34 80-123 2-35 (330)
245 3q9l_A Septum site-determining 42.4 47 0.0016 28.5 6.3 40 80-123 2-41 (260)
246 4hb9_A Similarities with proba 41.8 16 0.00053 34.1 3.2 33 79-122 1-33 (412)
247 1e6u_A GDP-fucose synthetase; 41.8 18 0.00063 32.4 3.6 33 79-121 3-35 (321)
248 2qxy_A Response regulator; reg 41.7 1E+02 0.0034 23.0 7.6 75 349-424 38-121 (142)
249 3r5x_A D-alanine--D-alanine li 41.5 27 0.00092 31.1 4.7 44 78-123 2-45 (307)
250 3fvw_A Putative NAD(P)H-depend 41.3 38 0.0013 27.9 5.2 39 79-122 2-41 (192)
251 2ph1_A Nucleotide-binding prot 41.2 47 0.0016 28.7 6.2 42 80-125 18-59 (262)
252 2gkg_A Response regulator homo 41.1 98 0.0033 22.3 8.0 75 349-424 39-125 (127)
253 3a10_A Response regulator; pho 40.9 95 0.0032 22.0 9.6 74 349-422 35-115 (116)
254 1g3q_A MIND ATPase, cell divis 40.7 46 0.0016 28.1 5.9 40 80-123 2-41 (237)
255 3dfz_A SIRC, precorrin-2 dehyd 40.7 1.7E+02 0.0056 24.8 11.5 132 305-444 43-187 (223)
256 3ius_A Uncharacterized conserv 40.7 23 0.00079 31.1 4.1 34 79-123 5-38 (286)
257 2g1u_A Hypothetical protein TM 40.5 36 0.0012 26.7 4.8 37 76-123 16-52 (155)
258 3qxc_A Dethiobiotin synthetase 40.5 37 0.0013 29.3 5.1 39 79-121 20-58 (242)
259 3ea0_A ATPase, para family; al 40.3 37 0.0013 28.8 5.3 42 79-124 3-45 (245)
260 3cio_A ETK, tyrosine-protein k 40.3 34 0.0012 30.5 5.1 46 74-123 98-143 (299)
261 3m2p_A UDP-N-acetylglucosamine 40.2 27 0.00091 31.2 4.4 33 80-122 3-35 (311)
262 3kht_A Response regulator; PSI 40.2 1.1E+02 0.0039 22.8 9.5 76 349-424 41-128 (144)
263 1e4e_A Vancomycin/teicoplanin 40.1 20 0.0007 32.7 3.7 43 78-123 2-45 (343)
264 2lpm_A Two-component response 40.0 17 0.00058 27.6 2.6 73 349-422 43-120 (123)
265 2r6j_A Eugenol synthase 1; phe 40.0 16 0.00053 32.9 2.8 34 81-124 13-46 (318)
266 3la6_A Tyrosine-protein kinase 39.5 37 0.0013 30.1 5.1 49 72-124 84-132 (286)
267 2b4a_A BH3024; flavodoxin-like 39.4 1.1E+02 0.0039 22.5 8.8 65 358-424 61-131 (138)
268 4had_A Probable oxidoreductase 39.3 26 0.0009 32.0 4.3 89 288-389 24-117 (350)
269 3guy_A Short-chain dehydrogena 39.3 19 0.00065 30.6 3.1 34 80-122 1-34 (230)
270 3llv_A Exopolyphosphatase-rela 39.1 28 0.00094 26.7 3.8 23 101-123 17-39 (141)
271 1g63_A Epidermin modifying enz 38.8 21 0.00072 29.3 3.1 37 81-124 4-40 (181)
272 3hdg_A Uncharacterized protein 38.8 35 0.0012 25.5 4.4 36 76-121 4-39 (137)
273 2pv7_A T-protein [includes: ch 38.8 27 0.00092 31.2 4.2 33 80-122 22-54 (298)
274 2ew2_A 2-dehydropantoate 2-red 38.7 23 0.00078 31.7 3.7 33 79-122 3-35 (316)
275 3hv2_A Response regulator/HD d 38.5 1.3E+02 0.0044 22.8 10.1 67 358-424 59-133 (153)
276 3orq_A N5-carboxyaminoimidazol 38.3 50 0.0017 30.6 6.1 37 77-124 10-46 (377)
277 1xvl_A Mn transporter, MNTC pr 38.2 1.1E+02 0.0037 27.6 8.1 104 349-459 86-199 (321)
278 3av3_A Phosphoribosylglycinami 38.0 19 0.00063 30.5 2.8 96 79-183 3-112 (212)
279 1kjq_A GART 2, phosphoribosylg 37.9 50 0.0017 30.6 6.1 38 76-124 8-45 (391)
280 4e3z_A Putative oxidoreductase 37.9 30 0.001 30.2 4.3 37 78-123 24-60 (272)
281 1jbe_A Chemotaxis protein CHEY 37.8 1.1E+02 0.0039 22.1 9.2 75 349-423 39-124 (128)
282 1dcf_A ETR1 protein; beta-alph 37.7 81 0.0028 23.4 6.4 66 359-424 52-129 (136)
283 2vvp_A Ribose-5-phosphate isom 37.7 46 0.0016 26.6 4.8 36 79-122 3-38 (162)
284 3m2t_A Probable dehydrogenase; 37.7 35 0.0012 31.4 4.9 92 288-389 6-99 (359)
285 2r85_A PURP protein PF1517; AT 37.6 22 0.00077 32.0 3.5 33 79-123 2-34 (334)
286 1evy_A Glycerol-3-phosphate de 37.6 22 0.00075 32.8 3.5 32 80-122 16-47 (366)
287 3cu5_A Two component transcrip 37.5 1.3E+02 0.0043 22.5 9.2 76 349-424 39-123 (141)
288 3m6m_D Sensory/regulatory prot 37.5 1.3E+02 0.0044 22.6 9.2 76 349-424 48-136 (143)
289 2q1w_A Putative nucleotide sug 37.4 34 0.0012 30.8 4.8 35 79-123 21-55 (333)
290 3enk_A UDP-glucose 4-epimerase 37.4 40 0.0014 30.4 5.2 35 79-123 5-39 (341)
291 1mvl_A PPC decarboxylase athal 37.3 35 0.0012 28.7 4.3 39 78-124 18-56 (209)
292 1rkx_A CDP-glucose-4,6-dehydra 37.2 31 0.0011 31.4 4.5 35 79-123 9-43 (357)
293 3czc_A RMPB; alpha/beta sandwi 37.2 59 0.002 23.9 5.2 38 79-122 18-57 (110)
294 3jte_A Response regulator rece 37.2 52 0.0018 24.7 5.3 34 78-121 2-35 (143)
295 3dff_A Teicoplanin pseudoaglyc 37.2 74 0.0025 27.9 6.7 43 77-125 5-47 (273)
296 3luf_A Two-component system re 37.2 2E+02 0.0067 24.6 11.1 106 317-424 123-245 (259)
297 1ehi_A LMDDL2, D-alanine:D-lac 37.1 35 0.0012 31.6 4.8 43 78-123 2-46 (377)
298 2qr3_A Two-component system re 37.0 49 0.0017 24.7 5.0 33 78-120 2-34 (140)
299 3en0_A Cyanophycinase; serine 36.9 52 0.0018 29.3 5.6 98 293-391 32-154 (291)
300 1iow_A DD-ligase, DDLB, D-ALA\ 36.7 54 0.0018 29.0 5.9 39 79-122 2-43 (306)
301 3d3k_A Enhancer of mRNA-decapp 36.7 28 0.00097 30.4 3.8 36 81-123 87-122 (259)
302 3hdv_A Response regulator; PSI 36.7 44 0.0015 24.9 4.7 33 78-120 6-38 (136)
303 2pk3_A GDP-6-deoxy-D-LYXO-4-he 36.7 36 0.0012 30.3 4.8 27 95-124 21-47 (321)
304 1toa_A Tromp-1, protein (perip 36.6 1.6E+02 0.0054 26.4 8.9 106 350-460 80-193 (313)
305 2qyt_A 2-dehydropantoate 2-red 36.6 20 0.00069 32.1 3.0 36 75-121 4-45 (317)
306 2p5y_A UDP-glucose 4-epimerase 36.5 35 0.0012 30.3 4.7 32 80-121 1-32 (311)
307 3sc6_A DTDP-4-dehydrorhamnose 36.4 18 0.00062 31.8 2.6 33 80-122 6-38 (287)
308 2z06_A Putative uncharacterize 36.3 1.3E+02 0.0045 26.0 7.9 92 289-393 2-105 (252)
309 3kht_A Response regulator; PSI 36.3 49 0.0017 25.0 4.9 38 75-122 1-38 (144)
310 1xq6_A Unknown protein; struct 36.2 40 0.0014 28.6 4.8 34 79-122 4-39 (253)
311 1xjc_A MOBB protein homolog; s 36.2 59 0.002 26.2 5.4 41 79-124 3-43 (169)
312 3l77_A Short-chain alcohol deh 35.9 32 0.0011 29.2 4.0 34 80-122 2-35 (235)
313 1dhr_A Dihydropteridine reduct 35.9 41 0.0014 28.7 4.8 35 80-123 7-41 (241)
314 4fb5_A Probable oxidoreductase 35.9 18 0.00063 33.5 2.7 96 287-389 25-125 (393)
315 1hyq_A MIND, cell division inh 35.7 51 0.0017 28.4 5.4 40 80-123 2-41 (263)
316 3cg0_A Response regulator rece 35.5 45 0.0015 25.0 4.6 34 75-118 5-38 (140)
317 1p3y_1 MRSD protein; flavoprot 35.5 28 0.00096 28.9 3.4 38 79-123 8-45 (194)
318 4eg0_A D-alanine--D-alanine li 35.4 41 0.0014 30.2 4.9 42 79-122 13-54 (317)
319 3tqq_A Methionyl-tRNA formyltr 35.3 27 0.00092 31.6 3.5 93 79-183 2-110 (314)
320 3ai3_A NADPH-sorbose reductase 35.3 63 0.0021 27.9 6.0 33 81-122 8-40 (263)
321 3cfy_A Putative LUXO repressor 35.3 1.4E+02 0.0046 22.2 10.2 76 349-424 38-122 (137)
322 2q1s_A Putative nucleotide sug 35.2 36 0.0012 31.4 4.6 36 78-123 31-67 (377)
323 3to5_A CHEY homolog; alpha(5)b 35.1 52 0.0018 25.2 4.8 75 349-423 47-132 (134)
324 3d3w_A L-xylulose reductase; u 35.1 47 0.0016 28.2 5.1 25 95-122 16-40 (244)
325 2o1e_A YCDH; alpha-beta protei 35.1 1.3E+02 0.0044 27.0 8.1 108 349-460 62-188 (312)
326 3fwz_A Inner membrane protein 35.0 34 0.0012 26.3 3.7 34 79-123 7-40 (140)
327 3lte_A Response regulator; str 34.9 60 0.002 23.9 5.2 33 78-120 5-37 (132)
328 2f62_A Nucleoside 2-deoxyribos 34.8 57 0.002 26.0 5.0 38 352-389 62-105 (161)
329 3uf0_A Short-chain dehydrogena 34.6 44 0.0015 29.2 4.9 31 81-120 32-62 (273)
330 2gwr_A DNA-binding response re 34.6 1.8E+02 0.0061 24.2 8.8 76 349-424 39-122 (238)
331 3s2y_A Chromate reductase; ura 40.8 8.3 0.00028 32.3 0.0 41 77-122 4-46 (199)
332 3l18_A Intracellular protease 34.5 60 0.0021 25.7 5.3 38 79-123 2-39 (168)
333 1gsa_A Glutathione synthetase; 34.5 24 0.00081 31.5 3.1 41 80-123 2-42 (316)
334 3s40_A Diacylglycerol kinase; 34.4 66 0.0023 28.7 6.1 43 78-123 7-49 (304)
335 3d3j_A Enhancer of mRNA-decapp 34.4 33 0.0011 30.9 3.9 36 81-123 134-169 (306)
336 1orr_A CDP-tyvelose-2-epimeras 34.3 33 0.0011 31.0 4.1 32 80-121 2-33 (347)
337 3orf_A Dihydropteridine reduct 34.1 50 0.0017 28.3 5.1 35 81-124 23-57 (251)
338 3ghy_A Ketopantoate reductase 33.9 38 0.0013 30.8 4.4 33 79-122 3-35 (335)
339 3evn_A Oxidoreductase, GFO/IDH 33.9 69 0.0024 28.8 6.2 90 288-389 6-98 (329)
340 3grc_A Sensor protein, kinase; 33.8 68 0.0023 24.0 5.4 33 78-120 5-37 (140)
341 1ys7_A Transcriptional regulat 33.6 2E+02 0.0069 23.7 10.7 76 349-424 41-125 (233)
342 2qr3_A Two-component system re 33.6 1.4E+02 0.0049 21.9 8.1 77 348-424 36-126 (140)
343 1weh_A Conserved hypothetical 33.5 38 0.0013 27.4 3.8 64 351-420 91-170 (171)
344 1vl0_A DTDP-4-dehydrorhamnose 33.5 32 0.0011 30.2 3.8 36 77-122 10-45 (292)
345 2nzw_A Alpha1,3-fucosyltransfe 33.4 55 0.0019 30.2 5.3 82 349-433 223-308 (371)
346 1yxm_A Pecra, peroxisomal tran 33.4 46 0.0016 29.5 4.9 33 81-122 19-51 (303)
347 3pg5_A Uncharacterized protein 33.4 50 0.0017 30.4 5.2 42 80-125 1-42 (361)
348 1rw7_A YDR533CP; alpha-beta sa 33.3 54 0.0018 28.1 5.1 45 80-124 4-53 (243)
349 3n0r_A Response regulator; sig 33.2 2.5E+02 0.0084 24.6 11.3 114 307-424 150-277 (286)
350 3f6p_A Transcriptional regulat 33.2 1.3E+02 0.0046 21.5 8.3 75 349-423 36-118 (120)
351 3ph3_A Ribose-5-phosphate isom 33.2 68 0.0023 25.8 5.1 39 77-123 18-56 (169)
352 4egs_A Ribose 5-phosphate isom 33.1 52 0.0018 26.8 4.6 40 75-120 30-70 (180)
353 3cg0_A Response regulator rece 33.1 1.5E+02 0.005 21.9 8.7 76 349-424 44-128 (140)
354 2hun_A 336AA long hypothetical 33.0 29 0.001 31.2 3.5 34 79-122 3-38 (336)
355 2an1_A Putative kinase; struct 33.0 39 0.0013 30.0 4.2 37 80-121 6-42 (292)
356 3e5n_A D-alanine-D-alanine lig 32.9 31 0.0011 32.2 3.7 51 71-124 14-65 (386)
357 3cx3_A Lipoprotein; zinc-bindi 32.8 95 0.0033 27.3 6.8 108 350-461 51-176 (284)
358 1bg6_A N-(1-D-carboxylethyl)-L 32.7 33 0.0011 31.4 3.8 33 79-122 4-36 (359)
359 3e82_A Putative oxidoreductase 32.6 1.3E+02 0.0044 27.5 7.9 90 287-389 7-98 (364)
360 3c1a_A Putative oxidoreductase 32.6 1.1E+02 0.0038 27.2 7.4 88 288-389 11-100 (315)
361 1jzt_A Hypothetical 27.5 kDa p 32.5 29 0.00098 30.1 3.1 36 81-123 60-95 (246)
362 2o8n_A APOA-I binding protein; 32.4 36 0.0012 29.8 3.7 36 81-123 81-116 (265)
363 2vrn_A Protease I, DR1199; cys 32.3 73 0.0025 25.8 5.6 42 76-124 6-47 (190)
364 1udb_A Epimerase, UDP-galactos 32.2 38 0.0013 30.5 4.1 32 80-121 1-32 (338)
365 4fc7_A Peroxisomal 2,4-dienoyl 32.1 71 0.0024 27.9 5.8 34 80-122 27-60 (277)
366 2wm3_A NMRA-like family domain 32.0 41 0.0014 29.7 4.2 35 79-123 5-40 (299)
367 2m1z_A LMO0427 protein; homolo 32.0 79 0.0027 23.2 4.9 41 79-124 2-44 (106)
368 3dfi_A Pseudoaglycone deacetyl 31.9 1.1E+02 0.0037 26.7 6.9 42 78-125 6-47 (270)
369 3sju_A Keto reductase; short-c 31.9 42 0.0014 29.5 4.2 35 79-122 23-57 (279)
370 3i4f_A 3-oxoacyl-[acyl-carrier 31.8 42 0.0014 29.0 4.2 36 79-123 6-41 (264)
371 3rqi_A Response regulator prot 31.6 1.1E+02 0.0039 24.3 6.7 76 349-424 41-125 (184)
372 3c24_A Putative oxidoreductase 31.6 49 0.0017 29.1 4.7 34 79-122 11-44 (286)
373 3od5_A Caspase-6; caspase doma 31.6 1E+02 0.0036 27.1 6.7 49 74-122 15-68 (278)
374 3mm4_A Histidine kinase homolo 31.6 1.8E+02 0.0061 23.7 8.0 66 357-424 119-196 (206)
375 3c1o_A Eugenol synthase; pheny 31.5 25 0.00084 31.5 2.7 35 79-123 4-38 (321)
376 4dll_A 2-hydroxy-3-oxopropiona 31.5 29 0.00099 31.3 3.2 36 76-122 28-63 (320)
377 1fjk_A Cardiac phospholamban; 31.5 26 0.0009 20.7 1.8 16 17-32 32-47 (52)
378 1qyd_A Pinoresinol-lariciresin 31.4 23 0.0008 31.5 2.5 35 79-123 4-38 (313)
379 3d7n_A Flavodoxin, WRBA-like p 31.3 26 0.00089 28.8 2.6 34 78-116 5-38 (193)
380 1qyc_A Phenylcoumaran benzylic 31.2 23 0.0008 31.4 2.5 35 79-123 4-38 (308)
381 3h11_B Caspase-8; cell death, 31.2 98 0.0033 27.1 6.4 49 74-122 11-71 (271)
382 3fkq_A NTRC-like two-domain pr 31.1 59 0.002 30.0 5.3 43 76-122 139-181 (373)
383 3i83_A 2-dehydropantoate 2-red 31.0 61 0.0021 29.1 5.3 33 80-123 3-35 (320)
384 1ks9_A KPA reductase;, 2-dehyd 31.0 41 0.0014 29.5 4.1 33 80-123 1-33 (291)
385 3cz5_A Two-component response 30.9 1.7E+02 0.0059 22.0 8.9 76 349-424 41-125 (153)
386 2gkg_A Response regulator homo 30.7 60 0.0021 23.5 4.5 32 79-120 5-36 (127)
387 1g0o_A Trihydroxynaphthalene r 30.6 68 0.0023 28.0 5.5 34 81-123 30-63 (283)
388 3k3p_A D-alanine--D-alanine li 30.5 37 0.0013 31.7 3.7 46 76-123 34-79 (383)
389 4ehd_A Caspase-3; caspase, apo 30.4 1.3E+02 0.0044 26.4 7.1 50 74-123 38-92 (277)
390 1ex7_A Guanylate kinase; subst 30.3 1.5E+02 0.0052 24.1 7.1 111 346-457 53-182 (186)
391 4ds3_A Phosphoribosylglycinami 30.3 47 0.0016 27.9 4.0 98 77-183 5-116 (209)
392 1zgz_A Torcad operon transcrip 30.3 1.5E+02 0.0051 21.1 9.5 75 349-423 36-118 (122)
393 3h7a_A Short chain dehydrogena 30.3 77 0.0026 27.2 5.6 33 81-122 8-40 (252)
394 1cp2_A CP2, nitrogenase iron p 30.3 67 0.0023 27.7 5.3 40 80-124 1-40 (269)
395 3l6d_A Putative oxidoreductase 30.2 37 0.0013 30.4 3.6 35 77-122 7-41 (306)
396 1fy2_A Aspartyl dipeptidase; s 30.1 51 0.0017 28.1 4.3 86 302-391 17-122 (229)
397 2r25_B Osmosensing histidine p 30.0 1.4E+02 0.0048 21.9 6.6 67 358-424 53-127 (133)
398 3hv2_A Response regulator/HD d 30.0 90 0.0031 23.8 5.6 34 77-120 12-45 (153)
399 4e6p_A Probable sorbitol dehyd 29.8 81 0.0028 27.1 5.7 33 81-122 9-41 (259)
400 2dko_A Caspase-3; low barrier 29.8 1.7E+02 0.0058 22.8 6.9 49 74-122 10-63 (146)
401 3ujp_A Mn transporter subunit; 29.7 1.5E+02 0.0051 26.5 7.5 105 349-459 72-185 (307)
402 1i24_A Sulfolipid biosynthesis 29.7 43 0.0015 31.1 4.1 34 78-121 10-43 (404)
403 2bka_A CC3, TAT-interacting pr 29.6 51 0.0017 27.8 4.3 36 79-124 18-55 (242)
404 3ug7_A Arsenical pump-driving 29.6 70 0.0024 29.2 5.5 40 79-123 24-64 (349)
405 2ydy_A Methionine adenosyltran 29.6 42 0.0014 29.8 3.9 33 80-122 3-35 (315)
406 1gy8_A UDP-galactose 4-epimera 29.5 57 0.002 30.1 5.0 35 79-123 2-37 (397)
407 3hn2_A 2-dehydropantoate 2-red 29.4 37 0.0012 30.5 3.4 33 80-123 3-35 (312)
408 2rh8_A Anthocyanidin reductase 29.4 57 0.002 29.3 4.9 35 79-123 9-43 (338)
409 3i12_A D-alanine-D-alanine lig 29.4 39 0.0013 31.2 3.7 45 78-124 2-46 (364)
410 3gem_A Short chain dehydrogena 29.4 35 0.0012 29.6 3.2 34 81-123 28-61 (260)
411 1n2s_A DTDP-4-, DTDP-glucose o 29.2 37 0.0013 29.9 3.5 33 80-123 1-33 (299)
412 3e9m_A Oxidoreductase, GFO/IDH 29.2 1E+02 0.0035 27.7 6.5 89 288-389 6-98 (330)
413 3m6m_D Sensory/regulatory prot 29.1 72 0.0025 24.1 4.8 35 76-120 11-45 (143)
414 3zq6_A Putative arsenical pump 29.1 59 0.002 29.3 4.8 38 81-123 15-52 (324)
415 3iqw_A Tail-anchored protein t 29.1 77 0.0026 28.8 5.5 41 78-123 14-54 (334)
416 2vvr_A Ribose-5-phosphate isom 29.0 54 0.0019 25.8 3.8 34 80-121 2-35 (149)
417 4e21_A 6-phosphogluconate dehy 28.8 43 0.0015 30.9 3.8 34 78-122 21-54 (358)
418 1u0t_A Inorganic polyphosphate 28.8 49 0.0017 29.7 4.1 38 80-122 5-42 (307)
419 3tjr_A Short chain dehydrogena 28.8 62 0.0021 28.7 4.9 33 81-122 32-64 (301)
420 3ftp_A 3-oxoacyl-[acyl-carrier 28.7 54 0.0019 28.6 4.4 33 81-122 29-61 (270)
421 3p45_A Caspase-6; protease, hu 28.7 1.6E+02 0.0054 23.9 6.7 49 74-122 38-91 (179)
422 2c29_D Dihydroflavonol 4-reduc 28.5 44 0.0015 30.1 3.9 26 95-123 14-39 (337)
423 3moi_A Probable dehydrogenase; 28.4 1.2E+02 0.004 28.1 6.9 88 288-389 3-95 (387)
424 4dyv_A Short-chain dehydrogena 28.4 48 0.0016 29.0 4.0 35 79-122 27-61 (272)
425 3f6c_A Positive transcription 28.3 1.7E+02 0.0059 21.2 8.9 68 357-424 46-120 (134)
426 2dwc_A PH0318, 433AA long hypo 28.2 89 0.003 29.4 6.1 36 78-124 18-53 (433)
427 2q9u_A A-type flavoprotein; fl 28.1 83 0.0028 29.3 5.9 40 78-122 255-294 (414)
428 1zmt_A Haloalcohol dehalogenas 28.1 24 0.00084 30.4 1.9 34 80-122 1-34 (254)
429 4hp8_A 2-deoxy-D-gluconate 3-d 28.0 65 0.0022 27.8 4.6 33 81-122 10-42 (247)
430 3sgw_A Ribose 5-phosphate isom 27.8 69 0.0024 26.1 4.3 37 78-122 28-66 (184)
431 3cz5_A Two-component response 27.8 94 0.0032 23.6 5.3 35 76-120 2-37 (153)
432 1p9l_A Dihydrodipicolinate red 27.8 89 0.003 26.9 5.4 42 351-393 38-80 (245)
433 1nw9_B Caspase 9, apoptosis-re 27.8 1.4E+02 0.0048 26.2 6.9 50 74-123 15-69 (277)
434 2hq1_A Glucose/ribitol dehydro 27.7 59 0.002 27.6 4.4 25 95-122 14-38 (247)
435 2x6t_A ADP-L-glycero-D-manno-h 27.7 43 0.0015 30.5 3.7 36 78-123 45-81 (357)
436 2vns_A Metalloreductase steap3 27.7 39 0.0013 28.4 3.1 34 78-122 27-60 (215)
437 1z45_A GAL10 bifunctional prot 27.6 55 0.0019 33.2 4.8 38 76-123 8-45 (699)
438 2pnf_A 3-oxoacyl-[acyl-carrier 27.6 54 0.0018 27.8 4.1 33 81-122 8-40 (248)
439 2raf_A Putative dinucleotide-b 27.5 55 0.0019 27.3 4.0 34 78-122 18-51 (209)
440 2afh_E Nitrogenase iron protei 27.5 78 0.0027 27.7 5.3 40 80-124 2-41 (289)
441 2j32_A Caspase-3; Pro-caspase3 27.5 1.6E+02 0.0055 25.3 7.1 49 74-122 10-63 (250)
442 3da8_A Probable 5'-phosphoribo 27.5 26 0.0009 29.6 1.9 98 76-183 9-119 (215)
443 1m72_A Caspase-1; caspase, cys 27.5 1.5E+02 0.0052 25.9 7.0 49 74-122 26-78 (272)
444 4h3v_A Oxidoreductase domain p 27.4 35 0.0012 31.5 3.1 91 288-389 7-106 (390)
445 2qs7_A Uncharacterized protein 27.4 1E+02 0.0036 23.8 5.4 37 81-124 9-47 (144)
446 2bll_A Protein YFBG; decarboxy 27.3 53 0.0018 29.5 4.2 34 80-123 1-35 (345)
447 2ehd_A Oxidoreductase, oxidore 27.3 53 0.0018 27.7 4.0 25 95-122 14-38 (234)
448 1pzg_A LDH, lactate dehydrogen 27.2 66 0.0023 29.2 4.8 37 75-122 5-42 (331)
449 2z1n_A Dehydrogenase; reductas 27.2 77 0.0026 27.2 5.1 33 81-122 8-40 (260)
450 1kyq_A Met8P, siroheme biosynt 27.2 41 0.0014 29.6 3.2 35 78-123 12-46 (274)
451 3hr4_A Nitric oxide synthase, 27.2 1E+02 0.0035 26.0 5.6 39 79-123 40-78 (219)
452 5nul_A Flavodoxin; electron tr 27.1 49 0.0017 25.2 3.4 30 94-123 8-37 (138)
453 1p2f_A Response regulator; DRR 27.0 1.6E+02 0.0055 24.1 7.0 76 349-424 35-117 (220)
454 1qo0_D AMIR; binding protein, 27.0 1.9E+02 0.0066 23.0 7.4 67 357-424 52-125 (196)
455 3rft_A Uronate dehydrogenase; 27.0 51 0.0018 28.5 3.9 36 80-124 3-38 (267)
456 1ys7_A Transcriptional regulat 27.0 85 0.0029 26.1 5.3 34 76-119 4-37 (233)
457 3e4c_A Caspase-1; zymogen, inf 26.9 1.4E+02 0.0048 26.6 6.8 43 80-122 60-104 (302)
458 3kux_A Putative oxidoreductase 26.7 1.4E+02 0.0046 27.2 6.9 89 288-389 8-98 (352)
459 3tpc_A Short chain alcohol deh 26.7 80 0.0027 27.0 5.1 35 81-124 8-42 (257)
460 2wsb_A Galactitol dehydrogenas 26.7 80 0.0027 26.8 5.1 33 81-122 12-44 (254)
461 2gk4_A Conserved hypothetical 26.7 62 0.0021 27.6 4.1 26 95-123 28-53 (232)
462 2qvg_A Two component response 26.6 55 0.0019 24.6 3.6 35 77-121 5-41 (143)
463 2gas_A Isoflavone reductase; N 26.5 27 0.00094 30.9 2.0 35 79-123 2-36 (307)
464 1p6q_A CHEY2; chemotaxis, sign 26.5 1.8E+02 0.0062 20.9 9.1 75 349-423 41-126 (129)
465 3awd_A GOX2181, putative polyo 26.5 67 0.0023 27.5 4.6 25 95-122 22-46 (260)
466 4etn_A LMPTP, low molecular we 26.4 74 0.0025 26.0 4.4 32 226-257 108-139 (184)
467 3e48_A Putative nucleoside-dip 26.4 38 0.0013 29.7 3.0 35 80-124 1-36 (289)
468 3gdo_A Uncharacterized oxidore 26.4 1.4E+02 0.0049 27.1 7.0 66 317-389 29-96 (358)
469 1pyo_A Caspase-2; apoptosis, c 26.2 1.8E+02 0.0062 23.2 6.7 49 74-122 27-80 (167)
470 3l6e_A Oxidoreductase, short-c 26.0 63 0.0022 27.4 4.2 34 80-122 3-36 (235)
471 2gdz_A NAD+-dependent 15-hydro 26.0 66 0.0023 27.8 4.5 33 81-122 8-40 (267)
472 1srr_A SPO0F, sporulation resp 25.9 1.8E+02 0.0063 20.7 8.4 76 349-424 37-121 (124)
473 4da9_A Short-chain dehydrogena 25.8 82 0.0028 27.5 5.1 34 80-122 29-62 (280)
474 2fz5_A Flavodoxin; alpha/beta 25.6 1.2E+02 0.004 22.7 5.4 29 94-122 9-37 (137)
475 2pl1_A Transcriptional regulat 25.6 1.8E+02 0.0062 20.6 9.7 75 349-423 34-117 (121)
476 2fwm_X 2,3-dihydro-2,3-dihydro 25.6 90 0.0031 26.6 5.2 34 81-123 8-41 (250)
477 3se7_A VANA; alpha-beta struct 25.5 30 0.001 31.6 2.2 45 78-124 2-46 (346)
478 2hrz_A AGR_C_4963P, nucleoside 25.5 74 0.0025 28.6 4.9 36 78-123 13-55 (342)
479 2pd6_A Estradiol 17-beta-dehyd 25.5 86 0.003 26.8 5.1 33 81-122 8-40 (264)
480 3ego_A Probable 2-dehydropanto 25.5 86 0.003 27.9 5.2 33 79-123 2-34 (307)
481 4dad_A Putative pilus assembly 25.4 70 0.0024 24.1 4.1 68 357-424 67-141 (146)
482 2fyw_A Conserved hypothetical 25.4 3.3E+02 0.011 23.5 9.4 100 289-390 135-259 (267)
483 1h5q_A NADP-dependent mannitol 25.3 82 0.0028 26.9 5.0 26 95-123 23-48 (265)
484 2ayx_A Sensor kinase protein R 25.3 3.1E+02 0.011 23.2 11.2 67 358-424 174-247 (254)
485 2d1y_A Hypothetical protein TT 25.2 91 0.0031 26.7 5.2 34 81-123 7-40 (256)
486 1kgs_A DRRD, DNA binding respo 25.2 2.8E+02 0.0095 22.6 9.9 75 349-423 36-119 (225)
487 1z82_A Glycerol-3-phosphate de 25.1 55 0.0019 29.6 3.8 33 79-122 14-46 (335)
488 1oi4_A Hypothetical protein YH 25.1 1.1E+02 0.0038 24.9 5.5 39 79-124 23-61 (193)
489 3cwq_A Para family chromosome 25.1 1.1E+02 0.0038 25.3 5.5 38 80-123 1-38 (209)
490 2ew8_A (S)-1-phenylethanol deh 25.1 89 0.0031 26.6 5.1 34 81-123 8-41 (249)
491 3ioy_A Short-chain dehydrogena 25.1 62 0.0021 29.1 4.2 34 81-123 9-42 (319)
492 2ae2_A Protein (tropinone redu 25.1 1.2E+02 0.0041 26.0 6.0 33 81-122 10-42 (260)
493 4e5v_A Putative THUA-like prot 25.1 1.4E+02 0.0047 26.3 6.3 40 78-122 3-43 (281)
494 4fyk_A Deoxyribonucleoside 5'- 25.1 48 0.0016 26.2 2.9 70 352-424 63-142 (152)
495 1jkx_A GART;, phosphoribosylgl 24.9 45 0.0016 28.0 3.0 95 80-183 1-109 (212)
496 2o23_A HADH2 protein; HSD17B10 24.8 94 0.0032 26.6 5.2 34 81-123 13-46 (265)
497 3sbx_A Putative uncharacterize 24.8 97 0.0033 25.5 4.8 42 76-122 10-51 (189)
498 3afn_B Carbonyl reductase; alp 24.8 57 0.002 27.8 3.8 26 94-122 15-40 (258)
499 4eso_A Putative oxidoreductase 24.8 69 0.0024 27.5 4.3 33 81-122 9-41 (255)
500 3crn_A Response regulator rece 24.7 2E+02 0.007 20.9 10.0 76 349-424 37-121 (132)
No 1
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=1.1e-46 Score=372.56 Aligned_cols=367 Identities=18% Similarity=0.231 Sum_probs=283.2
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCc-----------------ccCCcceEEE
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHND-----------------VHQGNLHVHF 140 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-----------------~~~~~~~v~~ 140 (465)
++|||++++..+++ +..||.++++.+++++|+++||+|+|+++......... ....+..+..
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~ 79 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYR 79 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEE
Confidence 47999999988875 57899999999999999999999999997765443211 0223333443
Q ss_pred eecC----CCccc------------cC------------CCCCCcEEEecCCchh---HHh--hhcCCcEEEEecchhHH
Q 044542 141 AAND----HGSVN------------LN------------NDGAFDYVHTESVSLP---HWR--AKMVPNVAVTWHGIWYE 187 (465)
Q Consensus 141 ~~~~----~~~~~------------~~------------~~~~~DiI~~~~~~~~---~~~--~~~~p~~v~~~h~~~~~ 187 (465)
.... ...+. +. +..+||+||+|++... ..+ ..++| +++++|+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~-~v~~~h~~~~~ 158 (439)
T 3fro_A 80 IGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIP-AVFTIHRLNKS 158 (439)
T ss_dssp EESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCC-EEEEESCCCCC
T ss_pred ecchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCC-EEEEecccccc
Confidence 3320 01111 00 2679999999976322 122 24667 99999997532
Q ss_pred HHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCcc
Q 044542 188 VMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFV 267 (465)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~ 267 (465)
........... . . ... .......++..++.+|.++++|+..++.....++.+..++.+||||+|.+.|.
T Consensus 159 ~~~~~~~~~~~-----~----~-~~~-~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~ 227 (439)
T 3fro_A 159 KLPAFYFHEAG-----L----S-ELA-PYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWN 227 (439)
T ss_dssp CEEHHHHHHTT-----C----G-GGC-CSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSC
T ss_pred cCchHHhCccc-----c----c-ccc-ccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcC
Confidence 11111110000 0 0 000 00000112366789999999999999887776777889999999999999887
Q ss_pred CCc------ccCcccccccCCCCCCcEEEEEeeccc-cccCHHHHHHHHHHhhhcC--CCeEEEEEeCCcch--hHHHHh
Q 044542 268 HDP------EAGVRFPEKLGVPANVSLVMGVAGRLV-RDKGHPLLYEAFSSITRDH--PGVYLLVAGTGPWG--RRYAEL 336 (465)
Q Consensus 268 ~~~------~~~~~~r~~~g~~~~~~~~l~~~Grl~-~~Kg~~~ll~a~~~l~~~~--~~~~l~ivG~g~~~--~~~~~l 336 (465)
+.. ..+..+++++|++++ .+++++|++. +.||++.+++|++.+.+++ ++++|+|+|+|+.. +.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~ 305 (439)
T 3fro_A 228 ESYLTGSRDERKKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSL 305 (439)
T ss_dssp GGGSCSCHHHHHHHHHHHHTCCSC--EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHH
T ss_pred cccccchhhhhHHHHHHHcCCCCC--cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHH
Confidence 652 234567888998765 7788999999 9999999999999999877 89999999998865 555544
Q ss_pred ----cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CH
Q 044542 337 ----GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NV 411 (465)
Q Consensus 337 ----~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~ 411 (465)
++.+.+.|+++.+++.++|++||++|+||.+ ||+|++++|||+||+|||+++.|+.. +++.++ +|+++++ |+
T Consensus 306 ~~~~~~~~~~~g~~~~~~~~~~~~~adv~v~ps~~-e~~~~~~~EAma~G~Pvi~s~~~~~~-e~~~~~-~g~~~~~~d~ 382 (439)
T 3fro_A 306 EEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYF-EPFGLVALEAMCLGAIPIASAVGGLR-DIITNE-TGILVKAGDP 382 (439)
T ss_dssp HHHCTTEEEECSCCCHHHHHHHHTTCSEEEECBSC-CSSCHHHHHHHHTTCEEEEESSTHHH-HHCCTT-TCEEECTTCH
T ss_pred HhhcCCEEEEcCCCCHHHHHHHHHHCCEEEeCCCC-CCccHHHHHHHHCCCCeEEcCCCCcc-eeEEcC-ceEEeCCCCH
Confidence 3677889999999999999999999999986 99999999999999999999999998 787776 9999999 99
Q ss_pred HHHHHHHHHHHh-CChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCCC
Q 044542 412 KSFVEALELVIR-DGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNPY 464 (465)
Q Consensus 412 ~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 464 (465)
++++++|.++++ + ++.++++++++++++ ++|||+.++++|.++|+++++++
T Consensus 383 ~~la~~i~~ll~~~-~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~ 434 (439)
T 3fro_A 383 GELANAILKALELS-RSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTGSIDRA 434 (439)
T ss_dssp HHHHHHHHHHHHHT-TTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHTCSCCB
T ss_pred HHHHHHHHHHHhcC-HHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHHhh
Confidence 999999999999 7 889999999999999 55999999999999999998764
No 2
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=1.2e-46 Score=367.05 Aligned_cols=353 Identities=20% Similarity=0.244 Sum_probs=283.4
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCc-ccCCcceEEEeecCCCc---------
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHND-VHQGNLHVHFAANDHGS--------- 147 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~--------- 147 (465)
++|||+++++.+| +..||+++++..++++| .||+|+|++.......... .......+.........
T Consensus 3 ~~mkIl~v~~~~~--p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (394)
T 3okp_A 3 ASRKTLVVTNDFP--PRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLPTPTTAHAM 78 (394)
T ss_dssp -CCCEEEEESCCT--TSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCSCHHHHHHH
T ss_pred CCceEEEEeCccC--CccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccccccchhhHHHH
Confidence 4789999999887 46899999999999999 6999999998765431111 11222333332221110
Q ss_pred cccCCCCCCcEEEecCCchhHH-----hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHH
Q 044542 148 VNLNNDGAFDYVHTESVSLPHW-----RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDE 222 (465)
Q Consensus 148 ~~~~~~~~~DiI~~~~~~~~~~-----~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (465)
....++.+||+||++......+ ...++|+++.++|+........ .....+ .
T Consensus 79 ~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~-------------------~~~~~~-----~ 134 (394)
T 3okp_A 79 AEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWSML-------------------PGSRQS-----L 134 (394)
T ss_dssp HHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHHTTS-------------------HHHHHH-----H
T ss_pred HHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhhhhc-------------------chhhHH-----H
Confidence 0111667899999987532211 1235566888999864321000 111111 1
Q ss_pred HHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccC-CcccCcccccccCCCCCCcEEEEEeeccccccC
Q 044542 223 IRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVH-DPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKG 301 (465)
Q Consensus 223 ~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~-~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg 301 (465)
+.+++.+|.++++|+..++.+.+.++ +..++.++|||+|.+.+.+ ....+..+++++|++++. ++++++|++.+.||
T Consensus 135 ~~~~~~~d~ii~~s~~~~~~~~~~~~-~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~Kg 212 (394)
T 3okp_A 135 RKIGTEVDVLTYISQYTLRRFKSAFG-SHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTT-PVIACNSRLVPRKG 212 (394)
T ss_dssp HHHHHHCSEEEESCHHHHHHHHHHHC-SSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTC-CEEEEESCSCGGGC
T ss_pred HHHHHhCCEEEEcCHHHHHHHHHhcC-CCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCCcCc-eEEEEEeccccccC
Confidence 25678999999999999999999876 4589999999999998877 555557788999998776 67789999999999
Q ss_pred HHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc----CCeEEcCCCChhHHHHHHHhcCeEEecccCC------CCC
Q 044542 302 HPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG----QNVKVLGALEAHQLSEFYNALDVFVNPTLRP------QGL 371 (465)
Q Consensus 302 ~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~----~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~------eg~ 371 (465)
++.+++|++.+.+++++++|+|+|+|+..+.++++. ++|.|+|+++++++.++|+.||++|+||.+. ||+
T Consensus 213 ~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~ 292 (394)
T 3okp_A 213 QDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGL 292 (394)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSS
T ss_pred HHHHHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCcccccccccccc
Confidence 999999999999988999999999999888777754 8999999999999999999999999999642 999
Q ss_pred cHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHH
Q 044542 372 DLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMA 450 (465)
Q Consensus 372 ~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~ 450 (465)
|++++|||++|+|||+++.++.. +++.++ +|+++++ |+++++++|.+++++ ++.+++++++++++++++|+|+.++
T Consensus 293 ~~~~~Ea~a~G~PvI~~~~~~~~-e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~ 369 (394)
T 3okp_A 293 GIVYLEAQACGVPVIAGTSGGAP-ETVTPA-TGLVVEGSDVDKLSELLIELLDD-PIRRAAMGAAGRAHVEAEWSWEIMG 369 (394)
T ss_dssp CHHHHHHHHTTCCEEECSSTTGG-GGCCTT-TEEECCTTCHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHTBHHHHH
T ss_pred CcHHHHHHHcCCCEEEeCCCChH-HHHhcC-CceEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 99999999999999999999998 888888 9999999 999999999999998 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCC
Q 044542 451 SAYERFFLRMKNP 463 (465)
Q Consensus 451 ~~~~~~~~~~~~~ 463 (465)
+++.++|+++..+
T Consensus 370 ~~~~~~~~~~~r~ 382 (394)
T 3okp_A 370 ERLTNILQSEPRK 382 (394)
T ss_dssp HHHHHHHHSCCC-
T ss_pred HHHHHHHHHhccC
Confidence 9999999987643
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=8.3e-46 Score=366.37 Aligned_cols=367 Identities=19% Similarity=0.247 Sum_probs=275.6
Q ss_pred CCCceeEEEEeCCCCCC-----CCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC-cccCCcceEEEeecCCC---
Q 044542 76 TFEKLKLAVFSKTWPIG-----AAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN-DVHQGNLHVHFAANDHG--- 146 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~-----~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~~~~~~~~v~~~~~~~~--- 146 (465)
...+|||++++..+++. ...||.++++..++++|.+.||+|++++......... .....+..+........
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~ 96 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGL 96 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSC
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCcccc
Confidence 45678999999877531 1469999999999999999999999999875422111 11112233333322110
Q ss_pred ----cccc------------C-CCCCCcEEEecCCch--hHH-h--hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCC
Q 044542 147 ----SVNL------------N-NDGAFDYVHTESVSL--PHW-R--AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGV 204 (465)
Q Consensus 147 ----~~~~------------~-~~~~~DiI~~~~~~~--~~~-~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~ 204 (465)
.+.. . ...+||+||+|.+.. ..+ + ..++| +++++|+........ .. .
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~~-----~~-----~ 165 (438)
T 3c48_A 97 SKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIP-LIHTAHTLAAVKNSY-----RD-----D 165 (438)
T ss_dssp CGGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCC-EEEECSSCHHHHSCC-------------
T ss_pred chhHHHHHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCC-EEEEecCCccccccc-----cc-----c
Confidence 0100 0 122499999997421 111 1 23677 999999975431100 00 0
Q ss_pred CCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcc-cCcccccccCCC
Q 044542 205 LPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPE-AGVRFPEKLGVP 283 (465)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~-~~~~~r~~~g~~ 283 (465)
.. ... ...+...++..++.+|.++++|+..++.+.+.+|++..++.+||||+|.+.|.+... ....++++++++
T Consensus 166 ~~----~~~-~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~~ 240 (438)
T 3c48_A 166 SD----TPE-SEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGIP 240 (438)
T ss_dssp -C----CHH-HHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTTCC
T ss_pred cC----Ccc-hHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcCCC
Confidence 00 000 111112234678899999999999999999988998899999999999988866432 222378888887
Q ss_pred CCCcEEEEEeeccccccCHHHHHHHHHHhhhcCC--CeEEEEEeC----CcchhHHHH----hc--CCeEEcCCCChhHH
Q 044542 284 ANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHP--GVYLLVAGT----GPWGRRYAE----LG--QNVKVLGALEAHQL 351 (465)
Q Consensus 284 ~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~--~~~l~ivG~----g~~~~~~~~----l~--~~V~~~g~v~~~~~ 351 (465)
++. .+++++|++.+.||++.+++|++.+.+++| +++|+|+|+ |+..+.+++ ++ ++|.|+|+++++++
T Consensus 241 ~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~ 319 (438)
T 3c48_A 241 LHT-KVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSEL 319 (438)
T ss_dssp SSS-EEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHH
T ss_pred CCC-cEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHH
Confidence 766 778899999999999999999999998876 899999998 665555544 33 78999999999999
Q ss_pred HHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHH
Q 044542 352 SEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQ 430 (465)
Q Consensus 352 ~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~ 430 (465)
.++|+.||++|+||.. |++|++++|||+||+|||+++.++.. +++.++.+|+++++ |+++++++|.+++++ ++.++
T Consensus 320 ~~~~~~adv~v~ps~~-e~~~~~~~Eama~G~PvI~~~~~~~~-e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~ 396 (438)
T 3c48_A 320 VAVYRAADIVAVPSFN-ESFGLVAMEAQASGTPVIAARVGGLP-IAVAEGETGLLVDGHSPHAWADALATLLDD-DETRI 396 (438)
T ss_dssp HHHHHHCSEEEECCSC-CSSCHHHHHHHHTTCCEEEESCTTHH-HHSCBTTTEEEESSCCHHHHHHHHHHHHHC-HHHHH
T ss_pred HHHHHhCCEEEECccc-cCCchHHHHHHHcCCCEEecCCCChh-HHhhCCCcEEECCCCCHHHHHHHHHHHHcC-HHHHH
Confidence 9999999999999975 99999999999999999999999998 88999999999998 999999999999998 89999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCC
Q 044542 431 RKGLACKEHALSMFTATKMASAYERFFLRMKNP 463 (465)
Q Consensus 431 ~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~ 463 (465)
++++++++++++ |+|+.+++++.++|++++++
T Consensus 397 ~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 397 RMGEDAVEHART-FSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhh
Confidence 999999999999 99999999999999998754
No 4
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=1.7e-45 Score=370.11 Aligned_cols=373 Identities=15% Similarity=0.109 Sum_probs=279.1
Q ss_pred ceeEEEEeCCCCCC---------CCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCC-CC---ccc----CCcceEEEe
Q 044542 79 KLKLAVFSKTWPIG---------AAPGGMERHASTLYHALAARGHEIHVFTAPSDRKP-HN---DVH----QGNLHVHFA 141 (465)
Q Consensus 79 ~mkIl~v~~~~p~~---------~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~-~~---~~~----~~~~~v~~~ 141 (465)
+|||++++..+++. +..||+++++.+++++|.+.||+|+|++....... .. ... ..+..+...
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 86 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRI 86 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEE
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEe
Confidence 58999999876542 35799999999999999999999999997654321 00 011 223334333
Q ss_pred ecCCC-------cccc-----------CCC--CCCcEEEecCCch--hHH-h--hhcCCcEEEEecchhHHHHhhhhhhh
Q 044542 142 ANDHG-------SVNL-----------NND--GAFDYVHTESVSL--PHW-R--AKMVPNVAVTWHGIWYEVMHSKLFGE 196 (465)
Q Consensus 142 ~~~~~-------~~~~-----------~~~--~~~DiI~~~~~~~--~~~-~--~~~~p~~v~~~h~~~~~~~~~~~~~~ 196 (465)
+.... .+.. .++ .+||+||+|.... ... + ..++| ++++.|+..........
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p-~v~~~H~~~~~~~~~~~--- 162 (499)
T 2r60_A 87 PFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLP-FTFTGHSLGAQKMEKLN--- 162 (499)
T ss_dssp CCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCC-EEEECSSCHHHHHHTTC---
T ss_pred cCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCc-EEEEccCcccccchhhc---
Confidence 32111 1111 122 5899999997521 111 1 23678 99999997654321100
Q ss_pred hhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHH--hC-C----CCCCEEEecCCCCCCCccCC
Q 044542 197 LFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKI--YQ-L----PQRNVHVILNGVDETKFVHD 269 (465)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~--~~-~----~~~ki~vi~ngvd~~~~~~~ 269 (465)
. .....+.+. ...........++..++.+|.++++|+..++.+.+. +| + +..++.+||||+|.+.|.+.
T Consensus 163 --~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~ 238 (499)
T 2r60_A 163 --V-NTSNFKEMD-ERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGE 238 (499)
T ss_dssp --C-CSTTSHHHH-HHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSC
T ss_pred --c-CCCCcchhh-hhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcCcc
Confidence 0 000000000 111111222234467899999999999999999887 77 6 78899999999999888764
Q ss_pred cc--cCcccccccC-----CCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCC-eEEEEEeC--Cc------c----
Q 044542 270 PE--AGVRFPEKLG-----VPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPG-VYLLVAGT--GP------W---- 329 (465)
Q Consensus 270 ~~--~~~~~r~~~g-----~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~-~~l~ivG~--g~------~---- 329 (465)
.. .+..+|+++| ++.+. .+++++||+.+.||++.+++|++.+.+++++ ++++|+|+ |+ .
T Consensus 239 ~~~~~~~~~r~~~~~~~~~~~~~~-~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~ 317 (499)
T 2r60_A 239 YGDKIKAKITKYLERDLGSERMEL-PAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEE 317 (499)
T ss_dssp CCHHHHHHHHHHHHHHSCGGGTTS-CEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHH
T ss_pred chhhhHHHHHHHhcccccccCCCC-cEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccc
Confidence 32 1245677777 66565 6678999999999999999999999876444 58999998 33 1
Q ss_pred ---hhHHHH----hc--CCeEEcCCCChhHHHHHHHhc----CeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCccee
Q 044542 330 ---GRRYAE----LG--QNVKVLGALEAHQLSEFYNAL----DVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRT 396 (465)
Q Consensus 330 ---~~~~~~----l~--~~V~~~g~v~~~~~~~~~~~a----Dv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e 396 (465)
.+.+++ ++ ++|+|+|+++++++.++|+.| |++|+||.+ ||||++++|||+||+|||+++.||.. |
T Consensus 318 ~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~-Eg~~~~~lEAma~G~PvI~s~~~g~~-e 395 (499)
T 2r60_A 318 KEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFY-EPFGLAPVEAMASGLPAVVTRNGGPA-E 395 (499)
T ss_dssp HHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSC-BCCCSHHHHHHHTTCCEEEESSBHHH-H
T ss_pred hHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECccc-CCCCcHHHHHHHcCCCEEEecCCCHH-H
Confidence 333433 33 789999999999999999999 999999986 99999999999999999999999998 8
Q ss_pred eeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCC
Q 044542 397 VVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNP 463 (465)
Q Consensus 397 ~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~ 463 (465)
++.++.+|+++++ |+++++++|.+++++ ++.+++++++++++++++|||+.+++++.++|++++++
T Consensus 396 ~v~~~~~g~l~~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 396 ILDGGKYGVLVDPEDPEDIARGLLKAFES-EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp HTGGGTSSEEECTTCHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred HhcCCceEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 9889999999998 999999999999998 89999999999999999999999999999999998754
No 5
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=1.6e-44 Score=361.93 Aligned_cols=371 Identities=19% Similarity=0.189 Sum_probs=268.9
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC------------------Ccc---cCCcceE
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH------------------NDV---HQGNLHV 138 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~------------------~~~---~~~~~~v 138 (465)
|||++++..+++....||+++++.+++++|+++||+|+|+++....... ... ...+..+
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 80 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecCCeEEEEEEEecCceE
Confidence 8999999977643357999999999999999999999999976432100 000 0123333
Q ss_pred EEeec-----CCC-cc--------------------------ccC-CCCCCcEEEecCCc---hhHHhh----hcCCcEE
Q 044542 139 HFAAN-----DHG-SV--------------------------NLN-NDGAFDYVHTESVS---LPHWRA----KMVPNVA 178 (465)
Q Consensus 139 ~~~~~-----~~~-~~--------------------------~~~-~~~~~DiI~~~~~~---~~~~~~----~~~p~~v 178 (465)
..... ..+ .+ ... ++.+|||||+|++. +...++ .++| ++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~p-~v 159 (485)
T 1rzu_A 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIP-SL 159 (485)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCC-EE
T ss_pred EEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchhHHHHHHhhcccCCCC-EE
Confidence 33221 100 00 000 36789999999742 222222 4567 99
Q ss_pred EEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHH-hC--------C
Q 044542 179 VTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKI-YQ--------L 249 (465)
Q Consensus 179 ~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~-~~--------~ 249 (465)
+++|+...... ...............+.............++..++.+|.++++|+..++.+.+. +| +
T Consensus 160 ~t~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~ 236 (485)
T 1rzu_A 160 LTIHNIAFQGQ---FGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGS 236 (485)
T ss_dssp EEESCTTCCCE---ECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHT
T ss_pred EEecCccccCC---CCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHh
Confidence 99999642100 000000000000000000000000000112356788999999999999998764 44 4
Q ss_pred CCCCEEEecCCCCCCCccCCccc-----------------CcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHh
Q 044542 250 PQRNVHVILNGVDETKFVHDPEA-----------------GVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSI 312 (465)
Q Consensus 250 ~~~ki~vi~ngvd~~~~~~~~~~-----------------~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l 312 (465)
+..++.+||||+|.+.|.+.... +..+++++|+++++..+++++||+.+.||++.+++|++.+
T Consensus 237 ~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l 316 (485)
T 1rzu_A 237 RAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEI 316 (485)
T ss_dssp TGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHH
T ss_pred hcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHH
Confidence 67899999999999888765431 3567888899876335888999999999999999999999
Q ss_pred hhcCCCeEEEEEeCCc--chhHHHHh----cCCeE-EcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeE
Q 044542 313 TRDHPGVYLLVAGTGP--WGRRYAEL----GQNVK-VLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTV 385 (465)
Q Consensus 313 ~~~~~~~~l~ivG~g~--~~~~~~~l----~~~V~-~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~Pv 385 (465)
.+ ++++|+|+|+|+ ..+.++++ +++|. +.|+ +.+++..+|+.||++|+||.+ ||||++++|||+||+||
T Consensus 317 ~~--~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~-E~~~~~~lEAma~G~Pv 392 (485)
T 1rzu_A 317 VS--LGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQAGCDAIIIPSRF-EPCGLTQLYALRYGCIP 392 (485)
T ss_dssp HH--TTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHHHCSEEEECCSC-CSSCSHHHHHHHHTCEE
T ss_pred Hh--cCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHhcCCEEEECccc-CCCCHHHHHHHHCCCCE
Confidence 76 489999999986 34555443 37897 7888 778889999999999999986 99999999999999999
Q ss_pred EecCCCCcceeeeeeC---------CceEEeCC-CHHHHHHHHHHHH---hCChHHHHHHHHHHHHHHHhhCCHHHHHHH
Q 044542 386 LTPNYPSIVRTVVVNE---------ELGYTFSP-NVKSFVEALELVI---RDGPKVLQRKGLACKEHALSMFTATKMASA 452 (465)
Q Consensus 386 I~s~~gg~~~e~v~~~---------~~G~l~~~-d~~~la~~i~~ll---~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~ 452 (465)
|+++.||.+ |++.++ .+|+++++ |+++|+++|.+++ ++ ++.++++++++++ ++|||+.++++
T Consensus 393 I~s~~gg~~-e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~-~~~~~~~~~~~~~---~~fs~~~~~~~ 467 (485)
T 1rzu_A 393 VVARTGGLA-DTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHD-PKLWTQMQKLGMK---SDVSWEKSAGL 467 (485)
T ss_dssp EEESSHHHH-HHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTC-HHHHHHHHHHHHT---CCCBHHHHHHH
T ss_pred EEeCCCChh-heecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHH---HhCChHHHHHH
Confidence 999999998 888888 89999999 9999999999999 67 8899999998874 67999999999
Q ss_pred HHHHHHHhcCC
Q 044542 453 YERFFLRMKNP 463 (465)
Q Consensus 453 ~~~~~~~~~~~ 463 (465)
|.++|++++++
T Consensus 468 ~~~~y~~~~~~ 478 (485)
T 1rzu_A 468 YAALYSQLISK 478 (485)
T ss_dssp HHHHHHHHTC-
T ss_pred HHHHHHHhhCC
Confidence 99999998764
No 6
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=8.3e-43 Score=340.03 Aligned_cols=345 Identities=19% Similarity=0.283 Sum_probs=262.0
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC------Ccc-----
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH------GSV----- 148 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~----- 148 (465)
|+.-+....|| ..||+++++..++++|+++||+|++++......... ......+....... ..+
T Consensus 14 ~~~~~~~~~~p---~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 88 (394)
T 2jjm_A 14 MKLKIGITCYP---SVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNK--VYPNIYFHEVTVNQYSVFQYPPYDLALA 88 (394)
T ss_dssp -CCEEEEECCC-----CHHHHHHHHHHHHHHHTTCEEEEECSSCC----C--CCTTEEEECCCCC----CCSCCHHHHHH
T ss_pred heeeeehhcCC---CCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccc--cCCceEEEecccccccccccccccHHHH
Confidence 45555555665 579999999999999999999999999864322111 11111121111100 000
Q ss_pred ----ccCCCCCCcEEEecCCch---hHHhhh-----cCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhh
Q 044542 149 ----NLNNDGAFDYVHTESVSL---PHWRAK-----MVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAM 216 (465)
Q Consensus 149 ----~~~~~~~~DiI~~~~~~~---~~~~~~-----~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (465)
...++.+||+||+|.... ..++.+ ++| +++++|+...... .. . .....+
T Consensus 89 ~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~---------~~-~--------~~~~~~ 149 (394)
T 2jjm_A 89 SKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIK-IVTTLHGTDITVL---------GS-D--------PSLNNL 149 (394)
T ss_dssp HHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSE-EEEECCHHHHHTT---------TT-C--------TTTHHH
T ss_pred HHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCC-EEEEEecCccccc---------CC-C--------HHHHHH
Confidence 011567899999996531 222221 366 9999998643100 00 0 111111
Q ss_pred HHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeecc
Q 044542 217 PRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRL 296 (465)
Q Consensus 217 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl 296 (465)
++..++.+|.++++|+..++.+.+.++. ..++.++|||+|.+.+.+.. ...++++++++++. .+++++|++
T Consensus 150 -----~~~~~~~ad~ii~~s~~~~~~~~~~~~~-~~~~~vi~ngv~~~~~~~~~--~~~~~~~~~~~~~~-~~i~~~G~~ 220 (394)
T 2jjm_A 150 -----IRFGIEQSDVVTAVSHSLINETHELVKP-NKDIQTVYNFIDERVYFKRD--MTQLKKEYGISESE-KILIHISNF 220 (394)
T ss_dssp -----HHHHHHHSSEEEESCHHHHHHHHHHTCC-SSCEEECCCCCCTTTCCCCC--CHHHHHHTTCC----CEEEEECCC
T ss_pred -----HHHHHhhCCEEEECCHHHHHHHHHhhCC-cccEEEecCCccHHhcCCcc--hHHHHHHcCCCCCC-eEEEEeecc
Confidence 1255788999999999999999997664 68999999999998876643 34567788886665 677799999
Q ss_pred ccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----c--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCC
Q 044542 297 VRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----G--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQG 370 (465)
Q Consensus 297 ~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg 370 (465)
.+.||++.+++|++.+.++ ++++|+|+|+|+..+.++++ + ++|.|+|+. +++.++|+.||++|+||.. ||
T Consensus 221 ~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~-e~ 296 (394)
T 2jjm_A 221 RKVKRVQDVVQAFAKIVTE-VDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQ--DNVAELLAMSDLMLLLSEK-ES 296 (394)
T ss_dssp CGGGTHHHHHHHHHHHHHS-SCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBSC--SCTHHHHHTCSEEEECCSC-CS
T ss_pred ccccCHHHHHHHHHHHHhh-CCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCch--hhHHHHHHhCCEEEecccc-CC
Confidence 9999999999999999877 57999999999877666543 2 789999974 8999999999999999975 99
Q ss_pred CcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHH
Q 044542 371 LDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKM 449 (465)
Q Consensus 371 ~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~ 449 (465)
+|++++|||++|+|||+++.++.. |++.++.+|+++++ |+++++++|.+++++ ++.+++++++++++++++|+|+.+
T Consensus 297 ~~~~~~EAma~G~PvI~~~~~~~~-e~v~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~ 374 (394)
T 2jjm_A 297 FGLVLLEAMACGVPCIGTRVGGIP-EVIQHGDTGYLCEVGDTTGVADQAIQLLKD-EELHRNMGERARESVYEQFRSEKI 374 (394)
T ss_dssp CCHHHHHHHHTTCCEEEECCTTST-TTCCBTTTEEEECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred CchHHHHHHhcCCCEEEecCCChH-HHhhcCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhCCHHHH
Confidence 999999999999999999999998 89999999999999 999999999999998 899999999999999888999999
Q ss_pred HHHHHHHHHHhcCC
Q 044542 450 ASAYERFFLRMKNP 463 (465)
Q Consensus 450 ~~~~~~~~~~~~~~ 463 (465)
++++.++|++++++
T Consensus 375 ~~~~~~~~~~~~~~ 388 (394)
T 2jjm_A 375 VSQYETIYYDVLRD 388 (394)
T ss_dssp HHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998765
No 7
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=100.00 E-value=4.3e-43 Score=343.30 Aligned_cols=347 Identities=19% Similarity=0.280 Sum_probs=265.2
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcc-cCCcceEEEeecC-CCccc----
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDV-HQGNLHVHFAAND-HGSVN---- 149 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~-~~~~~~v~~~~~~-~~~~~---- 149 (465)
..++|||+++++.+| +..||.++++..++++|.+.||+|++++........... ...+..+...... ...+.
T Consensus 17 ~~~~MkIl~i~~~~~--~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (406)
T 2gek_A 17 RGSHMRIGMVCPYSF--DVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGPA 94 (406)
T ss_dssp ----CEEEEECSSCT--TSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CCHH
T ss_pred CCCcceEEEEeccCC--CCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccccHH
Confidence 345799999998765 366999999999999999999999999988654411111 1111111111000 00011
Q ss_pred -------cCCCCCCcEEEecCCch---hHHhh--hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhH
Q 044542 150 -------LNNDGAFDYVHTESVSL---PHWRA--KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMP 217 (465)
Q Consensus 150 -------~~~~~~~DiI~~~~~~~---~~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (465)
..++.+||+||++.... ..... .+.| +++++|+..... .....+.
T Consensus 95 ~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~----------------------~~~~~~~ 151 (406)
T 2gek_A 95 THRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGP-IVATFHTSTTKS----------------------LTLSVFQ 151 (406)
T ss_dssp HHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESS-EEEEECCCCCSH----------------------HHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCC-EEEEEcCcchhh----------------------hhHHHHH
Confidence 11456899999987532 11222 2567 999999853210 1111112
Q ss_pred HHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeecc-
Q 044542 218 RLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRL- 296 (465)
Q Consensus 218 ~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl- 296 (465)
+.+. ..++.+|.++++|+..++.+.+.++ ..++ ++|||+|.+.+.+.... .+++.+. .+++++|++
T Consensus 152 ~~~~--~~~~~~d~ii~~s~~~~~~~~~~~~--~~~~-vi~~~v~~~~~~~~~~~-------~~~~~~~-~~i~~~G~~~ 218 (406)
T 2gek_A 152 GILR--PYHEKIIGRIAVSDLARRWQMEALG--SDAV-EIPNGVDVASFADAPLL-------DGYPREG-RTVLFLGRYD 218 (406)
T ss_dssp STTH--HHHTTCSEEEESSHHHHHHHHHHHS--SCEE-ECCCCBCHHHHHTCCCC-------TTCSCSS-CEEEEESCTT
T ss_pred HHHH--HHHhhCCEEEECCHHHHHHHHHhcC--CCcE-EecCCCChhhcCCCchh-------hhccCCC-eEEEEEeeeC
Confidence 2222 5578999999999999999988766 4678 99999998777654321 1122233 678899999
Q ss_pred ccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCc
Q 044542 297 VRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLD 372 (465)
Q Consensus 297 ~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~ 372 (465)
.+.||++.+++|+..+.+++|+++|+|+|+|+. +.++++ .++|.++|+++++++.++|+.||++|+||.+.||+|
T Consensus 219 ~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~ 297 (406)
T 2gek_A 219 EPRKGMAVLLAALPKLVARFPDVEILIVGRGDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFG 297 (406)
T ss_dssp SGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSC
T ss_pred ccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCc
Confidence 999999999999999998889999999999887 666554 378999999999999999999999999996459999
Q ss_pred HHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHH
Q 044542 373 LTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMAS 451 (465)
Q Consensus 373 ~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~ 451 (465)
++++|||++|+|||+++.++.. +++.++.+|+++++ |+++++++|.+++++ ++.+++++++++++++ .|+|+.+++
T Consensus 298 ~~~~Ea~a~G~PvI~~~~~~~~-e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~-~~s~~~~~~ 374 (406)
T 2gek_A 298 IVLVEAMAAGTAVVASDLDAFR-RVLADGDAGRLVPVDDADGMAAALIGILED-DQLRAGYVARASERVH-RYDWSVVSA 374 (406)
T ss_dssp HHHHHHHHHTCEEEECCCHHHH-HHHTTTTSSEECCTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHGG-GGBHHHHHH
T ss_pred hHHHHHHHcCCCEEEecCCcHH-HHhcCCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHH-hCCHHHHHH
Confidence 9999999999999999999998 88888999999998 999999999999998 8999999999999998 799999999
Q ss_pred HHHHHHHHhcCCC
Q 044542 452 AYERFFLRMKNPY 464 (465)
Q Consensus 452 ~~~~~~~~~~~~~ 464 (465)
++.++|++++++.
T Consensus 375 ~~~~~~~~~~~~~ 387 (406)
T 2gek_A 375 QIMRVYETVSGAG 387 (406)
T ss_dssp HHHHHHHHHCCTT
T ss_pred HHHHHHHHHHhhc
Confidence 9999999988653
No 8
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=1.6e-43 Score=354.58 Aligned_cols=371 Identities=16% Similarity=0.188 Sum_probs=265.5
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC-----------------Ccc---cCCcceEE
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH-----------------NDV---HQGNLHVH 139 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-----------------~~~---~~~~~~v~ 139 (465)
|||+++++.+++....||+++++.+|+++|+++||+|+|+++....... ... ...+..+.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 80 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIY 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCCcEEEEEEEECCcEEE
Confidence 8999999977543357999999999999999999999999976422100 000 01233333
Q ss_pred Eeec-----CCC-cc-----------------------ccCC----CCCCcEEEecCCc---hhHHhh---hcCCcEEEE
Q 044542 140 FAAN-----DHG-SV-----------------------NLNN----DGAFDYVHTESVS---LPHWRA---KMVPNVAVT 180 (465)
Q Consensus 140 ~~~~-----~~~-~~-----------------------~~~~----~~~~DiI~~~~~~---~~~~~~---~~~p~~v~~ 180 (465)
.... ..+ .+ ...+ +.+||+||+|++. +...++ .++| ++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~~~~p-~v~t 159 (485)
T 2qzs_A 81 LIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAK-SVFT 159 (485)
T ss_dssp EEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHTTCSSE-EEEE
T ss_pred EEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhccCCCC-EEEE
Confidence 3221 000 00 0112 3799999999753 222222 3567 9999
Q ss_pred ecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHH-hCCC--------C
Q 044542 181 WHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKI-YQLP--------Q 251 (465)
Q Consensus 181 ~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~-~~~~--------~ 251 (465)
+|+...... ...............+.............++..++.+|.++++|+..++.+.+. +|.. .
T Consensus 160 ~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~ 236 (485)
T 2qzs_A 160 VHNLAYQGM---FYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRH 236 (485)
T ss_dssp ESCTTCCCE---EEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHH
T ss_pred ecCccccCC---CCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhc
Confidence 999642100 000000000000000000000000000112255788999999999999988764 4532 2
Q ss_pred --CCEEEecCCCCCCCccCCcc-----------------cCcccccccCCCCC-CcEEEEEeeccccccCHHHHHHHHHH
Q 044542 252 --RNVHVILNGVDETKFVHDPE-----------------AGVRFPEKLGVPAN-VSLVMGVAGRLVRDKGHPLLYEAFSS 311 (465)
Q Consensus 252 --~ki~vi~ngvd~~~~~~~~~-----------------~~~~~r~~~g~~~~-~~~~l~~~Grl~~~Kg~~~ll~a~~~ 311 (465)
.++.+||||+|.+.|.+... .+..+++++|++.+ +..+++++||+.+.||++.+++|++.
T Consensus 237 ~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 316 (485)
T 2qzs_A 237 REGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPG 316 (485)
T ss_dssp HTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHH
T ss_pred cCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHH
Confidence 78999999999998876542 13467788888761 33778899999999999999999999
Q ss_pred hhhcCCCeEEEEEeCCc--chhHHHHh----cCCeE-EcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCe
Q 044542 312 ITRDHPGVYLLVAGTGP--WGRRYAEL----GQNVK-VLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRT 384 (465)
Q Consensus 312 l~~~~~~~~l~ivG~g~--~~~~~~~l----~~~V~-~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~P 384 (465)
+.+ ++++|+|+|+|+ ..+.++++ +++|. +.|+ +.+++..+|+.||++|+||.+ ||||++++|||+||+|
T Consensus 317 l~~--~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~-E~~g~~~lEAma~G~P 392 (485)
T 2qzs_A 317 LLE--QGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGY-HEAFSHRIMGGADVILVPSRF-EPCGLTQLYGLKYGTL 392 (485)
T ss_dssp HHH--TTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESC-CHHHHHHHHHHCSEEEECCSC-CSSCSHHHHHHHHTCE
T ss_pred Hhh--CCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCC-CHHHHHHHHHhCCEEEECCcc-CCCcHHHHHHHHCCCC
Confidence 976 489999999985 34455443 36886 8888 778889999999999999986 9999999999999999
Q ss_pred EEecCCCCcceeeeeeC---------CceEEeCC-CHHHHHHHHHHHH---hCChHHHHHHHHHHHHHHHhhCCHHHHHH
Q 044542 385 VLTPNYPSIVRTVVVNE---------ELGYTFSP-NVKSFVEALELVI---RDGPKVLQRKGLACKEHALSMFTATKMAS 451 (465)
Q Consensus 385 vI~s~~gg~~~e~v~~~---------~~G~l~~~-d~~~la~~i~~ll---~~~~~~~~~~~~~~~~~~~~~fs~~~~~~ 451 (465)
||+++.||.+ |++.++ .+|+++++ |+++++++|.+++ .+ ++.++++++++++ ++|||+.+++
T Consensus 393 vI~s~~gg~~-e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~-~~~~~~~~~~~~~---~~fs~~~~~~ 467 (485)
T 2qzs_A 393 PLVRRTGGLA-DTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSR-PSLWRFVQRQAMA---MDFSWQVAAK 467 (485)
T ss_dssp EEEESSHHHH-HHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTS-HHHHHHHHHHHHH---CCCCHHHHHH
T ss_pred EEECCCCCcc-ceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHh---hcCCHHHHHH
Confidence 9999999998 888888 89999999 9999999999999 57 8899999998874 6799999999
Q ss_pred HHHHHHHHhcCC
Q 044542 452 AYERFFLRMKNP 463 (465)
Q Consensus 452 ~~~~~~~~~~~~ 463 (465)
+|.++|+++..+
T Consensus 468 ~~~~ly~~~~~~ 479 (485)
T 2qzs_A 468 SYRELYYRLKLE 479 (485)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHhhhh
Confidence 999999998754
No 9
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=5.6e-43 Score=350.75 Aligned_cols=373 Identities=17% Similarity=0.206 Sum_probs=257.1
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC-c------c--------------cCCc
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN-D------V--------------HQGN 135 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~------~--------------~~~~ 135 (465)
...||||+++.++++-...||.+.++..|.++|+++||+|.|+++........ + + ...+
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 86 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRG 86 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETT
T ss_pred CCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECC
Confidence 45799999999876545789999999999999999999999999765432211 0 0 0111
Q ss_pred ceEEEeecCC---C--------ccc------cC------------------------------CCCCCcEEEecCCc---
Q 044542 136 LHVHFAANDH---G--------SVN------LN------------------------------NDGAFDYVHTESVS--- 165 (465)
Q Consensus 136 ~~v~~~~~~~---~--------~~~------~~------------------------------~~~~~DiI~~~~~~--- 165 (465)
..+.++.... . .+. +. ....+||+|+|.+.
T Consensus 87 v~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t~l 166 (536)
T 3vue_A 87 VDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGP 166 (536)
T ss_dssp EEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGGST
T ss_pred ceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEEEECcchHHH
Confidence 1222221100 0 000 00 12456788899762
Q ss_pred hhHHhh---------hcCCcEEEEecchhHHHHh-hhhhhhhhhcCCCCCCCch----hhhh--hhhHHHHHHHHhhccc
Q 044542 166 LPHWRA---------KMVPNVAVTWHGIWYEVMH-SKLFGELFSNQNGVLPGSM----TELQ--EAMPRLVDEIRFFSSY 229 (465)
Q Consensus 166 ~~~~~~---------~~~p~~v~~~h~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~ 229 (465)
.+.++. .++| +|+|+|++.+.... ........ .+...... .... ......-..+..+..|
T Consensus 167 ~~~~l~~~~~~~~~~~~~~-~V~TiHnl~~qg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~a 242 (536)
T 3vue_A 167 LASYLKNNYQPNGIYRNAK-VAFCIHNISYQGRFAFEDYPELN---LSERFRSSFDFIDGYDTPVEGRKINWMKAGILEA 242 (536)
T ss_dssp HHHHHHHHTTTTTSSTTCE-EEEEESCTTCCCEEEGGGGGGGC---CCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHC
T ss_pred HHHHHHHhhhhhhhhcccc-eeeeecCcccccccchhhhhhcC---CchhhcchhhhhhcccccccccchhHHHHHHHhc
Confidence 222222 2456 99999986422100 00000000 00000000 0000 0000000112556789
Q ss_pred CEEEEeChhHHHHHHHHhC--------CCCCCEEEecCCCCCCCccCCccc------------------CcccccccCCC
Q 044542 230 NQHICISNSAAEVLVKIYQ--------LPQRNVHVILNGVDETKFVHDPEA------------------GVRFPEKLGVP 283 (465)
Q Consensus 230 d~ii~~S~~~~~~~~~~~~--------~~~~ki~vi~ngvd~~~~~~~~~~------------------~~~~r~~~g~~ 283 (465)
|.|+++|+..++.+.+.++ ....++.+|+||||.+.|.|..+. +..+++.+|++
T Consensus 243 d~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~ 322 (536)
T 3vue_A 243 DRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLP 322 (536)
T ss_dssp SEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSC
T ss_pred cEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCC
Confidence 9999999999998877553 235789999999999999875321 22345567776
Q ss_pred CC-CcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcch--hHHH----HhcCCeEEcCCCChhHHHHHHH
Q 044542 284 AN-VSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG--RRYA----ELGQNVKVLGALEAHQLSEFYN 356 (465)
Q Consensus 284 ~~-~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~--~~~~----~l~~~V~~~g~v~~~~~~~~~~ 356 (465)
.+ +..+|+++||+.++||++.+++|++++.++ +.+++++|.|+.. ..++ .+..+|.+.+..+.+++..+|+
T Consensus 323 ~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~--~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 400 (536)
T 3vue_A 323 VDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE--DVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMA 400 (536)
T ss_dssp CCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS--SCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHH
T ss_pred CCCCCcEEEEEeeccccCChHHHHHHHHHhHhh--CCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHH
Confidence 43 236777999999999999999999999774 5688888877543 2222 2348999999999999999999
Q ss_pred hcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceE----------EeCC-CHHHHHHHHHHHHh--
Q 044542 357 ALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGY----------TFSP-NVKSFVEALELVIR-- 423 (465)
Q Consensus 357 ~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~----------l~~~-d~~~la~~i~~ll~-- 423 (465)
.||++|+||.+ |+||++++|||+||+|||+|++||++ |+|.++.+|+ ++++ |+++|+++|.++++
T Consensus 401 ~aD~~v~PS~~-E~fgl~~lEAma~G~PvI~s~~gG~~-e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~ 478 (536)
T 3vue_A 401 GADVLAVPSRF-EPCGLIQLQGMRYGTPCACASTGGLV-DTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVV 478 (536)
T ss_dssp HCSEEEECCSC-CSSCSHHHHHHHTTCCEEECSCTHHH-HHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHT
T ss_pred hhheeeccccc-CCCCHHHHHHHHcCCCEEEcCCCCch-heeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhc
Confidence 99999999986 99999999999999999999999999 9999999998 6677 89999999998886
Q ss_pred CChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhc
Q 044542 424 DGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMK 461 (465)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~ 461 (465)
+ .+.++++.+++ ++++|||++++++|+++|+++.
T Consensus 479 ~-~~~~~~~~~~a---m~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 479 G-TPAYEEMVRNC---MNQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp T-SHHHHHHHHHH---HHSCCSSHHHHHHHHHHHHTTC
T ss_pred C-cHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhh
Confidence 4 34566666554 5678999999999999999874
No 10
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=1.6e-43 Score=347.57 Aligned_cols=344 Identities=22% Similarity=0.292 Sum_probs=258.6
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC---ccc---CCcceEEEeecCCC---
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN---DVH---QGNLHVHFAANDHG--- 146 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~---~~~---~~~~~v~~~~~~~~--- 146 (465)
.+++|||+++++.+ ..||+++++..++++|.+.||+|++++......... ... .....+.+......
T Consensus 37 ~~~~mkIl~v~~~~----~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (416)
T 2x6q_A 37 KLKGRSFVHVNSTS----FGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQGNESLKLTEEMKELYL 112 (416)
T ss_dssp TTTTCEEEEEESCS----SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHHHHHHHHHTTCCSCCCCHHHHHHHH
T ss_pred hhhccEEEEEeCCC----CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhhhhcccceeecccccccccHHHHHHHH
Confidence 45679999999863 579999999999999999999999998765321100 000 00000000000000
Q ss_pred -----ccccCCCCCCcEEEecCCchh---HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHH
Q 044542 147 -----SVNLNNDGAFDYVHTESVSLP---HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPR 218 (465)
Q Consensus 147 -----~~~~~~~~~~DiI~~~~~~~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (465)
.....+..+||+||+|+.... .......| ++++.|+.... + .......+.
T Consensus 113 ~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~---------------~-----~~~~~~~~~- 170 (416)
T 2x6q_A 113 NVNRENSKFIDLSSFDYVLVHDPQPAALIEFYEKKSP-WLWRCHIDLSS---------------P-----NREFWEFLR- 170 (416)
T ss_dssp HHHHHHHHSSCGGGSSEEEEESSTTGGGGGGSCCCSC-EEEECCSCCSS---------------C-----CHHHHHHHH-
T ss_pred HHHHHHHHHHhhcCCCEEEEeccchhhHHHHHHhcCC-EEEEEccccCC---------------c-----cHHHHHHHH-
Confidence 011125668999999985322 22233456 99999974311 0 011112221
Q ss_pred HHHHHHhhcccCEEE-EeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCc---ccCcccccccCCCCCCcEEEEEee
Q 044542 219 LVDEIRFFSSYNQHI-CISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDP---EAGVRFPEKLGVPANVSLVMGVAG 294 (465)
Q Consensus 219 ~~~~~~~~~~~d~ii-~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~---~~~~~~r~~~g~~~~~~~~l~~~G 294 (465)
+.+.++|.++ ++|+..++ +++..++.+||||+|...+.+.. .....++++++++++. .+++++|
T Consensus 171 -----~~~~~~~~~i~~~s~~~~~------~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~vG 238 (416)
T 2x6q_A 171 -----RFVEKYDRYIFHLPEYVQP------ELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEK-PIITQVS 238 (416)
T ss_dssp -----HHHTTSSEEEESSGGGSCT------TSCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTS-CEEEEEC
T ss_pred -----HHHHhCCEEEEechHHHHh------hCCccceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCC-cEEEEEe
Confidence 4456788776 56665543 24457899999999987665322 2234577888888776 6777999
Q ss_pred ccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcc-----hhHHH----Hhc--CCeEEcCCCC---hhHHHHHHHhcCe
Q 044542 295 RLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPW-----GRRYA----ELG--QNVKVLGALE---AHQLSEFYNALDV 360 (465)
Q Consensus 295 rl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~-----~~~~~----~l~--~~V~~~g~v~---~~~~~~~~~~aDv 360 (465)
|+.+.||++.+++|++.+.+++|+++|+|+|+|+. .+.++ +++ ++|.|+|+++ ++++.++|+.||+
T Consensus 239 rl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~ 318 (416)
T 2x6q_A 239 RFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDV 318 (416)
T ss_dssp CCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSE
T ss_pred ccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCE
Confidence 99999999999999999998889999999999864 22233 333 7999999664 6899999999999
Q ss_pred EEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 044542 361 FVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHA 440 (465)
Q Consensus 361 ~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~ 440 (465)
+|+||.+ ||+|++++|||+||+|||+++.||.+ +++.++.+|++++ |+++++++|.+++++ ++.++++++++++++
T Consensus 319 ~v~ps~~-E~~~~~~lEAma~G~PvI~~~~~g~~-e~i~~~~~g~l~~-d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~ 394 (416)
T 2x6q_A 319 ILQMSIR-EGFGLTVTEAMWKGKPVIGRAVGGIK-FQIVDGETGFLVR-DANEAVEVVLYLLKH-PEVSKEMGAKAKERV 394 (416)
T ss_dssp EEECCSS-CSSCHHHHHHHHTTCCEEEESCHHHH-HHCCBTTTEEEES-SHHHHHHHHHHHHHC-HHHHHHHHHHHHHHH
T ss_pred EEECCCc-CCCccHHHHHHHcCCCEEEccCCCCh-hheecCCCeEEEC-CHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH
Confidence 9999986 99999999999999999999999998 8999999999999 999999999999998 899999999999999
Q ss_pred HhhCCHHHHHHHHHHHHHHhc
Q 044542 441 LSMFTATKMASAYERFFLRMK 461 (465)
Q Consensus 441 ~~~fs~~~~~~~~~~~~~~~~ 461 (465)
+++|+|+.++++|.++|++++
T Consensus 395 ~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 395 RKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp HHHTBHHHHHHHHHHHHHTC-
T ss_pred HHHcCHHHHHHHHHHHHHHhh
Confidence 988999999999999999875
No 11
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=100.00 E-value=2.4e-43 Score=346.05 Aligned_cols=336 Identities=14% Similarity=0.139 Sum_probs=260.0
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccC--CcceEE-EeecC--CCccc----c
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQ--GNLHVH-FAAND--HGSVN----L 150 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~--~~~~v~-~~~~~--~~~~~----~ 150 (465)
|||+++++.+| ..||+++++..|+++|++. |+|++++....+........ ...... ..... ...+. .
T Consensus 1 MkI~~v~~~~p---~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 76 (413)
T 3oy2_A 1 MKLIIVGAHSS---VPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSVHANIEEFDAQTAEHVRGLNEQGFYYSGLSEF 76 (413)
T ss_dssp CEEEEEEECTT---CCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCSCSSSEEEEHHHHHHHTTCCSTTCCHHHHHHH
T ss_pred CeEEEecCCCC---CCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCcccccccccCCccccccccccccccchHHHHHHH
Confidence 89999998764 5699999999999999999 99999997765322111000 000000 00000 01111 1
Q ss_pred CCCCCCcEEEecCCchh--HH--hhhcCC---cEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHH
Q 044542 151 NNDGAFDYVHTESVSLP--HW--RAKMVP---NVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEI 223 (465)
Q Consensus 151 ~~~~~~DiI~~~~~~~~--~~--~~~~~p---~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (465)
.+..+||+||+|.+... .+ ...++| +.+..+|..... ....+ +
T Consensus 77 l~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~------~ 126 (413)
T 3oy2_A 77 IDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKN------------------------IRENL------W 126 (413)
T ss_dssp HHHHCCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBS------------------------CCGGG------G
T ss_pred HHhcCCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchh------------------------hHHHH------H
Confidence 15668999999965211 11 112333 245555542100 00001 1
Q ss_pred HhhcccC--EEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCC--CCcEEEEEeeccccc
Q 044542 224 RFFSSYN--QHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPA--NVSLVMGVAGRLVRD 299 (465)
Q Consensus 224 ~~~~~~d--~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~--~~~~~l~~~Grl~~~ 299 (465)
.+++++| .++++|+..++.+.+ ++. +.++.++|||+|.+.| ...++++++++ +. ++++++||+.+.
T Consensus 127 ~~~~~~~~~~ii~~S~~~~~~~~~-~~~-~~~~~vi~ngvd~~~~-------~~~~~~~~~~~~~~~-~~il~vGr~~~~ 196 (413)
T 3oy2_A 127 WIFSHPKVVGVMAMSKCWISDICN-YGC-KVPINIVSHFVDTKTI-------YDARKLVGLSEYNDD-VLFLNMNRNTAR 196 (413)
T ss_dssp GGGGCTTEEEEEESSTHHHHHHHH-TTC-CSCEEECCCCCCCCCC-------TTHHHHTTCGGGTTS-EEEECCSCSSGG
T ss_pred HHHhccCCceEEEcCHHHHHHHHH-cCC-CCceEEeCCCCCHHHH-------HHHHHhcCCCcccCc-eEEEEcCCCchh
Confidence 5678888 999999999999999 776 6899999999999877 34566777765 44 888899999999
Q ss_pred cCHHHHHHHHHHhhhcCCCeEEEEEeCCcch------hHHHH----hc--CC-------eEEcCCCChhHHHHHHHhcCe
Q 044542 300 KGHPLLYEAFSSITRDHPGVYLLVAGTGPWG------RRYAE----LG--QN-------VKVLGALEAHQLSEFYNALDV 360 (465)
Q Consensus 300 Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~------~~~~~----l~--~~-------V~~~g~v~~~~~~~~~~~aDv 360 (465)
||++.+++|++.+.+++|+++|+|+|+|+.. +.+++ ++ ++ |.+.|+++++++.++|+.||+
T Consensus 197 Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv 276 (413)
T 3oy2_A 197 KRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDV 276 (413)
T ss_dssp GTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSE
T ss_pred cCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCE
Confidence 9999999999999998999999999998653 55554 33 44 888999999999999999999
Q ss_pred EEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCc---------------eE--EeCC-CHHHHHHHHHHHH
Q 044542 361 FVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEEL---------------GY--TFSP-NVKSFVEALELVI 422 (465)
Q Consensus 361 ~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~---------------G~--l~~~-d~~~la~~i~~ll 422 (465)
+|+||.+ ||||++++|||+||+|||+++.||.+ |++.++.+ |+ ++++ |+++++++| +++
T Consensus 277 ~v~pS~~-E~~~~~~lEAma~G~PvI~s~~~g~~-e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~ 353 (413)
T 3oy2_A 277 IVNCSSG-EGFGLCSAEGAVLGKPLIISAVGGAD-DYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFF 353 (413)
T ss_dssp EEECCSC-CSSCHHHHHHHTTTCCEEEECCHHHH-HHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHT
T ss_pred EEeCCCc-CCCCcHHHHHHHcCCCEEEcCCCChH-HHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHh
Confidence 9999985 99999999999999999999999998 88888777 88 9998 999999999 999
Q ss_pred hCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCC
Q 044542 423 RDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKNP 463 (465)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~ 463 (465)
++ ++.+++++++++++++++|||+.++++|.++|++++++
T Consensus 354 ~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 393 (413)
T 3oy2_A 354 KD-EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRV 393 (413)
T ss_dssp TS-HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC-
T ss_pred cC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 98 99999999999999998899999999999999998865
No 12
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=1e-41 Score=351.87 Aligned_cols=369 Identities=14% Similarity=0.109 Sum_probs=267.4
Q ss_pred CCceeEEEEeCCCC-------CCCCCChHHHHHHH--------HHHHHHhCCcEEE----EEeCCCCCCCCC------c-
Q 044542 77 FEKLKLAVFSKTWP-------IGAAPGGMERHAST--------LYHALAARGHEIH----VFTAPSDRKPHN------D- 130 (465)
Q Consensus 77 ~~~mkIl~v~~~~p-------~~~~~gG~~~~~~~--------l~~~L~~~G~~V~----v~~~~~~~~~~~------~- 130 (465)
+..|+|++++..-. ..+..||...++.+ |+++|+++||+|+ |+|....+.... +
T Consensus 276 ~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~ 355 (816)
T 3s28_A 276 PMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLER 355 (816)
T ss_dssp CCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEE
T ss_pred CceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCccee
Confidence 34589999997421 12478999999984 6666778999876 898775443111 1
Q ss_pred cc-CCcceEEEeecCC------------CccccC--------------CCCCCcEEEecCCc--hhHH---hhhcCCcEE
Q 044542 131 VH-QGNLHVHFAANDH------------GSVNLN--------------NDGAFDYVHTESVS--LPHW---RAKMVPNVA 178 (465)
Q Consensus 131 ~~-~~~~~v~~~~~~~------------~~~~~~--------------~~~~~DiI~~~~~~--~~~~---~~~~~p~~v 178 (465)
.. ..+..|...+..+ ..|.+. ...+|||||+|.+. +..+ ...++| ++
T Consensus 356 i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~gvP-~V 434 (816)
T 3s28_A 356 VYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVT-QC 434 (816)
T ss_dssp CTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTCC-EE
T ss_pred ecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCCC-EE
Confidence 11 1233333332211 112211 34589999999642 1122 223678 99
Q ss_pred EEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHH---hC-------
Q 044542 179 VTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKI---YQ------- 248 (465)
Q Consensus 179 ~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~---~~------- 248 (465)
.+.|+......... ..........+....++..+...++.+|.||++|+..++.+.+. |+
T Consensus 435 ~T~Hsl~~~k~~~~----------~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~ 504 (816)
T 3s28_A 435 TIAHALEKTKYPDS----------DIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTL 504 (816)
T ss_dssp EECSCCHHHHSTTT----------TTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEE
T ss_pred EEEecccccccccc----------cchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhcccc
Confidence 99998754321100 00000001122223344445578899999999999988853221 11
Q ss_pred -----------CCCCCEEEecCCCCCCCccCCcccC-----------------cccccccCC--CCCCcEEEEEeecccc
Q 044542 249 -----------LPQRNVHVILNGVDETKFVHDPEAG-----------------VRFPEKLGV--PANVSLVMGVAGRLVR 298 (465)
Q Consensus 249 -----------~~~~ki~vi~ngvd~~~~~~~~~~~-----------------~~~r~~~g~--~~~~~~~l~~~Grl~~ 298 (465)
....|+.|||||+|.+.|.+..... ...++.+|+ +.+. .+|+++||+.+
T Consensus 505 p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~-~vIl~vGRl~~ 583 (816)
T 3s28_A 505 PGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKK-PILFTMARLDR 583 (816)
T ss_dssp TTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTS-CEEEEECCCCT
T ss_pred chhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCC-eEEEEEccCcc
Confidence 1223999999999999997754322 245667776 4444 67889999999
Q ss_pred ccCHHHHHHHHHHhhhcCCCeEEEEEeCCc-----------chhHHHH----hc--CCeEEcCCC----ChhHHHHHHH-
Q 044542 299 DKGHPLLYEAFSSITRDHPGVYLLVAGTGP-----------WGRRYAE----LG--QNVKVLGAL----EAHQLSEFYN- 356 (465)
Q Consensus 299 ~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~-----------~~~~~~~----l~--~~V~~~g~v----~~~~~~~~~~- 356 (465)
.||++.+++|++.+.+.+++++|+|+|+|+ ..+.+++ ++ ++|.|+|++ +.+++..+|+
T Consensus 584 ~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~ 663 (816)
T 3s28_A 584 VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICD 663 (816)
T ss_dssp TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHh
Confidence 999999999999998877899999999988 2333333 33 899999955 4588999998
Q ss_pred hcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHH----hCChHHHHH
Q 044542 357 ALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVI----RDGPKVLQR 431 (465)
Q Consensus 357 ~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll----~~~~~~~~~ 431 (465)
++|++|+||.+ |+||++++|||+||+|||+|+.||.+ +++.++.+|+++++ |+++++++|.+++ .+ ++.+++
T Consensus 664 aaDvfV~PS~~-EgfglvllEAMA~G~PVIasd~GG~~-EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d-~~~~~~ 740 (816)
T 3s28_A 664 TKGAFVQPALY-EAFGLTVVEAMTCGLPTFATCKGGPA-EIIVHGKSGFHIDPYHGDQAADTLADFFTKCKED-PSHWDE 740 (816)
T ss_dssp TTCEEEECCSC-BSSCHHHHHHHHTTCCEEEESSBTHH-HHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHC-THHHHH
T ss_pred cCeEEEECCCc-cCccHHHHHHHHcCCCEEEeCCCChH-HHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccC-HHHHHH
Confidence 68999999986 99999999999999999999999998 89999999999999 9999999997776 77 899999
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 044542 432 KGLACKEHALSMFTATKMASAYERFFLRM 460 (465)
Q Consensus 432 ~~~~~~~~~~~~fs~~~~~~~~~~~~~~~ 460 (465)
++++++++++++|||+.+++++.++|+..
T Consensus 741 m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 741 ISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999999988999999999999999864
No 13
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=4.1e-42 Score=332.58 Aligned_cols=347 Identities=16% Similarity=0.177 Sum_probs=258.8
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCc------------
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGS------------ 147 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------ 147 (465)
|||+++++.++ ..||.++++.+++++|+++||+|++++........ .+..+...+.....
T Consensus 1 MkIl~i~~~~~---~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~l 72 (374)
T 2iw1_A 1 MIVAFCLYKYF---PFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCP-----KAFELIQVPVKSHTNHGRNAEYYAWV 72 (374)
T ss_dssp -CEEEECSEEC---TTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCC-----TTCEEEECCCCCSSHHHHHHHHHHHH
T ss_pred CeEEEEEeecC---CCcchhhHHHHHHHHHHhCCCeEEEEecCCCCCCC-----CCcEEEEEccCcccchhhHHHHHHHH
Confidence 89999999864 25999999999999999999999999987432211 12334333322110
Q ss_pred cccCCCCCCcEEEecCCchhHHhhhcCCcEEEEecchhHHHH--hhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHh
Q 044542 148 VNLNNDGAFDYVHTESVSLPHWRAKMVPNVAVTWHGIWYEVM--HSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRF 225 (465)
Q Consensus 148 ~~~~~~~~~DiI~~~~~~~~~~~~~~~p~~v~~~h~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (465)
....++.+||+||+++...... .....+....... ......... ........+. +..
T Consensus 73 ~~~i~~~~~Dvv~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~-----~~~ 131 (374)
T 2iw1_A 73 QNHLKEHPADRVVGFNKMPGLD-------VYFAADVCYAEKVAQEKGFLYRLT---------SRYRHYAAFE-----RAT 131 (374)
T ss_dssp HHHHHHSCCSEEEESSCCTTCS-------EEECCSCCHHHHHHHHCCHHHHTS---------HHHHHHHHHH-----HHH
T ss_pred HHHHhccCCCEEEEecCCCCce-------eeeccccccceeeeecccchhhhc---------HHHHHHHHHH-----HHH
Confidence 0011567899999987432110 1111111110000 000000000 0001111111 123
Q ss_pred h--cccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcc--cCcccccccCCCCCCcEEEEEeeccccccC
Q 044542 226 F--SSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPE--AGVRFPEKLGVPANVSLVMGVAGRLVRDKG 301 (465)
Q Consensus 226 ~--~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~--~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg 301 (465)
+ +.+|.++++|+..++.+.+.+|++..++.++|||+|.+.|.+... .+..+++++|++++. .+++++|++.+.||
T Consensus 132 ~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~K~ 210 (374)
T 2iw1_A 132 FEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQ-NLLLQVGSDFGRKG 210 (374)
T ss_dssp HSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTC-EEEEEECSCTTTTT
T ss_pred hhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhCCCCCC-eEEEEeccchhhcC
Confidence 3 379999999999999999988998899999999999988766432 234578888988766 78889999999999
Q ss_pred HHHHHHHHHHhhhc-CCCeEEEEEeCCcchh---HHHHhc--CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHH
Q 044542 302 HPLLYEAFSSITRD-HPGVYLLVAGTGPWGR---RYAELG--QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTL 375 (465)
Q Consensus 302 ~~~ll~a~~~l~~~-~~~~~l~ivG~g~~~~---~~~~l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~ 375 (465)
++.+++|++.+.++ +++++|+++|+|+..+ ..++++ ++|+|+|+. +++.++|+.||++|+||.+ |++|+++
T Consensus 211 ~~~li~a~~~l~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~ps~~-e~~~~~~ 287 (374)
T 2iw1_A 211 VDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAYQ-EAAGIVL 287 (374)
T ss_dssp HHHHHHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCC--SCHHHHHHHCSEEEECCSC-CSSCHHH
T ss_pred HHHHHHHHHHhHhccCCceEEEEEcCCCHHHHHHHHHHcCCCCcEEECCCc--ccHHHHHHhcCEEEecccc-CCcccHH
Confidence 99999999999776 5789999999987432 223333 799999985 7899999999999999976 9999999
Q ss_pred HHHHHcCCeEEecCCCCcceeeeeeCCceEEeC-C-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 044542 376 IEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFS-P-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAY 453 (465)
Q Consensus 376 ~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~-~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~ 453 (465)
+|||++|+|||+++.++.. +++.++.+|++++ + |+++++++|.+++++ ++.++++++++++++++ ++|+.+++++
T Consensus 288 ~Ea~a~G~Pvi~~~~~~~~-e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 364 (374)
T 2iw1_A 288 LEAITAGLPVLTTAVCGYA-HYIADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADT-QDLYSLPEKA 364 (374)
T ss_dssp HHHHHHTCCEEEETTSTTT-HHHHHHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHH-SCCSCHHHHH
T ss_pred HHHHHCCCCEEEecCCCch-hhhccCCceEEeCCCCCHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHH-hhHHHHHHHH
Confidence 9999999999999999998 8889999999998 7 999999999999998 89999999999999987 7999999999
Q ss_pred HHHHHHhcC
Q 044542 454 ERFFLRMKN 462 (465)
Q Consensus 454 ~~~~~~~~~ 462 (465)
.++++..++
T Consensus 365 ~~~l~~~l~ 373 (374)
T 2iw1_A 365 ADIITGGLD 373 (374)
T ss_dssp HHHHHCC--
T ss_pred HHHHHHhhc
Confidence 999987654
No 14
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=100.00 E-value=5.4e-42 Score=327.75 Aligned_cols=308 Identities=16% Similarity=0.150 Sum_probs=242.9
Q ss_pred CCceeEEEEeCC-----------CCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC
Q 044542 77 FEKLKLAVFSKT-----------WPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH 145 (465)
Q Consensus 77 ~~~mkIl~v~~~-----------~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~ 145 (465)
|++|||+++++. +|+ ...||.++++..++++|.+.||+|++++........ .. +.......
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p-~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~-----~~--~~~~~~~~ 72 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPP-QGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGR-----PG--LTVVPAGE 72 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSC-SSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCS-----TT--EEECSCCS
T ss_pred CCccEEEEEeccccccCcccccccCc-ccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCC-----Cc--ceeccCCc
Confidence 346999999988 332 246999999999999999999999999987644321 11 22221110
Q ss_pred --CccccCCCCCCcEEEecCCchhHH--hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHH
Q 044542 146 --GSVNLNNDGAFDYVHTESVSLPHW--RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVD 221 (465)
Q Consensus 146 --~~~~~~~~~~~DiI~~~~~~~~~~--~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (465)
......++.+||+||+|....... ...++| ++++|+....
T Consensus 73 ~~~l~~~l~~~~~Dvi~~~~~~~~~~~~~~~~~p--v~~~h~~~~~---------------------------------- 116 (342)
T 2iuy_A 73 PEEIERWLRTADVDVVHDHSGGVIGPAGLPPGTA--FISSHHFTTR---------------------------------- 116 (342)
T ss_dssp HHHHHHHHHHCCCSEEEECSSSSSCSTTCCTTCE--EEEEECSSSB----------------------------------
T ss_pred HHHHHHHHHhcCCCEEEECCchhhHHHHhhcCCC--EEEecCCCCC----------------------------------
Confidence 111122566999999998543222 223445 8899985311
Q ss_pred HHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccC
Q 044542 222 EIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKG 301 (465)
Q Consensus 222 ~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg 301 (465)
...+|.++++|+..++.+.+ ..++.+||||+|.+.+.+.... .+ ++ .+++++||+.+.||
T Consensus 117 ----~~~~d~ii~~S~~~~~~~~~-----~~~~~vi~ngvd~~~~~~~~~~---------~~-~~-~~i~~vG~~~~~Kg 176 (342)
T 2iuy_A 117 ----PVNPVGCTYSSRAQRAHCGG-----GDDAPVIPIPVDPARYRSAADQ---------VA-KE-DFLLFMGRVSPHKG 176 (342)
T ss_dssp ----CSCCTTEEESCHHHHHHTTC-----CTTSCBCCCCBCGGGSCCSTTC---------CC-CC-SCEEEESCCCGGGT
T ss_pred ----cccceEEEEcCHHHHHHHhc-----CCceEEEcCCCChhhcCccccc---------CC-CC-CEEEEEeccccccC
Confidence 01189999999999988765 5789999999998877654321 11 22 35779999999999
Q ss_pred HHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----cCCeEEcCCCChhHHHHHHHhcCeEEeccc---------CC
Q 044542 302 HPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----GQNVKVLGALEAHQLSEFYNALDVFVNPTL---------RP 368 (465)
Q Consensus 302 ~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~---------~~ 368 (465)
++.+++|++.+ +++|+|+|+|+..+.++++ +++|+|+|+++++++.++|+.||++++||. +.
T Consensus 177 ~~~li~a~~~~-----~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~ 251 (342)
T 2iuy_A 177 ALEAAAFAHAC-----GRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWC 251 (342)
T ss_dssp HHHHHHHHHHH-----TCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCC
T ss_pred HHHHHHHHHhc-----CcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccc
Confidence 99999999987 6889999999877666554 489999999999999999999999999997 24
Q ss_pred CCCcHHHHHHHHcCCeEEecCCCCcceeeeee--CCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCH
Q 044542 369 QGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVN--EELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTA 446 (465)
Q Consensus 369 eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~--~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~ 446 (465)
||+|++++|||++|+|||+++.|+.. |++.+ +.+|+++++|+++++++|.++++ +++++++++++|+|
T Consensus 252 E~~~~~~~EAma~G~PvI~s~~~~~~-e~~~~~~~~~g~~~~~d~~~l~~~i~~l~~---------~~~~~~~~~~~~s~ 321 (342)
T 2iuy_A 252 EPGATVVSEAAVSGTPVVGTGNGCLA-EIVPSVGEVVGYGTDFAPDEARRTLAGLPA---------SDEVRRAAVRLWGH 321 (342)
T ss_dssp CCCCHHHHHHHHTTCCEEECCTTTHH-HHGGGGEEECCSSSCCCHHHHHHHHHTSCC---------HHHHHHHHHHHHBH
T ss_pred cCccHHHHHHHhcCCCEEEcCCCChH-HHhcccCCCceEEcCCCHHHHHHHHHHHHH---------HHHHHHHHHHhcCH
Confidence 99999999999999999999999998 88888 88999998899999999998876 57788888888999
Q ss_pred HHHHHHHHHHHHHhcCC
Q 044542 447 TKMASAYERFFLRMKNP 463 (465)
Q Consensus 447 ~~~~~~~~~~~~~~~~~ 463 (465)
+++++++.++|++++++
T Consensus 322 ~~~~~~~~~~~~~~~~~ 338 (342)
T 2iuy_A 322 VTIAERYVEQYRRLLAG 338 (342)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcc
Confidence 99999999999998765
No 15
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=100.00 E-value=3.1e-39 Score=314.47 Aligned_cols=339 Identities=10% Similarity=0.031 Sum_probs=228.7
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC-cccCCcce----------EEEeecCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN-DVHQGNLH----------VHFAANDH 145 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~~~~~~~~----------v~~~~~~~ 145 (465)
.++|||+++++.|+++...||. +.+.+++++|+++||+|+|++......... ........ ........
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~-~~v~~la~~L~~~GheV~Vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 122 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGI-STALKLFEQFDNKKFKKRIILTDATPNPKDLQSFKSFKYVMPEEDKDFALQIVPFND 122 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHH-HHHHHHHTTSCTTTCEEEEEESSCCCCHHHHGGGTTSEECCTTCCCCCSEEEEECSC
T ss_pred CCCceEEEEeCCCCccccccHH-HHHHHHHHHHHHcCCceEEEEecCCCChHHHHhhhccceeeccCCccccceeeeccc
Confidence 4579999999998753234554 568999999999999999999875321000 00000000 00000000
Q ss_pred CccccCCCCCCcEEEecCCchhHHhhh------------cCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhh
Q 044542 146 GSVNLNNDGAFDYVHTESVSLPHWRAK------------MVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQ 213 (465)
Q Consensus 146 ~~~~~~~~~~~DiI~~~~~~~~~~~~~------------~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (465)
.........++|+||++.+........ ..+ .+..+|+.+.. +. +. ...
T Consensus 123 ~~~~~~~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~-----~~--------~~------~~~ 182 (413)
T 2x0d_A 123 RYNRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNK-ILYIIQDFEPG-----FY--------QW------SSQ 182 (413)
T ss_dssp CTTCCEEECTTEEEEECSHHHHHHHHHHHHHHHHHHTCCCCC-EEEEECSCGGG-----GS--------CS------SHH
T ss_pred cccccccCCCCCEEEEehHHHHHHHHHhhhhhhhhcccccCc-EEEEEeechhh-----cC--------cc------ChH
Confidence 000001234799999997532222111 224 67677775321 00 00 000
Q ss_pred hhhHHHHHHHHhhcccC--EEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEE
Q 044542 214 EAMPRLVDEIRFFSSYN--QHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMG 291 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~d--~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~ 291 (465)
.. .....++.++ .++++|+++++.+.+ +|++..++.++|||+|.+.|.+.. .+ ..++ ..++
T Consensus 183 ~~-----~~~~~~~~~~~~~vi~~S~~~~~~l~~-~g~~~~~~~~i~~g~d~~~~~~~~---------~~-~~~~-~~il 245 (413)
T 2x0d_A 183 YV-----LAESTYKYRGPQIAVFNSELLKQYFNN-KGYNFTDEYFFQPKINTTLKNYIN---------DK-RQKE-KIIL 245 (413)
T ss_dssp HH-----HHHHTTSCCSCEEEEEESHHHHHHHHH-HTCCCSEEEEECCCCCHHHHTTTT---------SC-CCCC-SEEE
T ss_pred HH-----HHHHHhccCCceEEEEcCHHHHHHHHH-cCCCCCceEEeCCCcCchhhcccc---------cc-cCCC-CEEE
Confidence 01 1124455555 589999999999988 576667899999999976553311 01 1122 3455
Q ss_pred Eeecc-ccccCHHHHHHHHHHhhhcCCC---eEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccC
Q 044542 292 VAGRL-VRDKGHPLLYEAFSSITRDHPG---VYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLR 367 (465)
Q Consensus 292 ~~Grl-~~~Kg~~~ll~a~~~l~~~~~~---~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~ 367 (465)
++||+ .+.||++.+++|++.+.+++|+ ++|+++|+|+....+ .+.++|+|+|+++.+++.++|+.||++++||..
T Consensus 246 ~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~~~l-~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~ 324 (413)
T 2x0d_A 246 VYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDIAL-GKGIHLNSLGKLTLEDYADLLKRSSIGISLMIS 324 (413)
T ss_dssp EEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCCEEE-ETTEEEEEEESCCHHHHHHHHHHCCEEECCCSS
T ss_pred EEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchhhhc-CCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCC
Confidence 88996 6789999999999999887775 899999998764221 123789999999999999999999999999976
Q ss_pred CCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCH
Q 044542 368 PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTA 446 (465)
Q Consensus 368 ~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~ 446 (465)
|+||++++||||||+|||+++ +|.. |++.++.+|+++++ |+++++++|.++++| ++.+++ ++++.++ .|+|
T Consensus 325 -E~~g~~~lEAmA~G~PVV~~~-~g~~-e~v~~~~~G~lv~~~d~~~la~ai~~ll~~-~~~~~~---~~~~~~~-~~~W 396 (413)
T 2x0d_A 325 -PHPSYPPLEMAHFGLRVITNK-YENK-DLSNWHSNIVSLEQLNPENIAETLVELCMS-FNNRDV---DKKESSN-MMFY 396 (413)
T ss_dssp -SSCCSHHHHHHHTTCEEEEEC-BTTB-CGGGTBTTEEEESSCSHHHHHHHHHHHHHH-TC----------CCBS-CGGG
T ss_pred -CCCCcHHHHHHhCCCcEEEeC-CCcc-hhhhcCCCEEEeCCCCHHHHHHHHHHHHcC-HHHHHH---hHHHHHH-hCCH
Confidence 999999999999999999955 5666 88888999999999 999999999999998 666655 5666554 5999
Q ss_pred HHHHHHHHHHHHHhcCC
Q 044542 447 TKMASAYERFFLRMKNP 463 (465)
Q Consensus 447 ~~~~~~~~~~~~~~~~~ 463 (465)
+++.++ .++|+++.++
T Consensus 397 ~~~~~~-~~~~~~l~~~ 412 (413)
T 2x0d_A 397 INEFNE-FSFIKEIEEK 412 (413)
T ss_dssp CCCC----TTHHHHHTT
T ss_pred HHHHHH-HHHHHHHHhh
Confidence 999888 6777776653
No 16
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=100.00 E-value=1.4e-33 Score=288.09 Aligned_cols=325 Identities=15% Similarity=0.165 Sum_probs=240.2
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHH--HHhCCcEEEEEeCCCCCCCCC--cccCCcceEEEeecCCCc---c
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHA--LAARGHEIHVFTAPSDRKPHN--DVHQGNLHVHFAANDHGS---V 148 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~--L~~~G~~V~v~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~---~ 148 (465)
..++|||+++++.+ ..||+++++..+++. +.+.||+|++++......... .+.... .+..... ... .
T Consensus 202 ~~~~~rI~~~~~~~----~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~l~ 275 (568)
T 2vsy_A 202 SKGPLRVGFVSNGF----GAHPTGLLTVALFEALQRRQPDLQMHLFATSGDDGSTLRTRLAQAS-TLHDVTA-LGHLATA 275 (568)
T ss_dssp SSSCEEEEEEESCS----SSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCSCHHHHHHHHTS-EEEECTT-CCHHHHH
T ss_pred CCCCeEEEEECccc----ccChHHHHHHHHHhhccCCcccEEEEEEECCCCCccHHHHHHHhcC-eEEECCC-CCHHHHH
Confidence 45689999999986 347899999999999 788899999999754221111 122222 2211111 011 1
Q ss_pred ccCCCCCCcEEEecCCc-----hhHHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHH
Q 044542 149 NLNNDGAFDYVHTESVS-----LPHWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEI 223 (465)
Q Consensus 149 ~~~~~~~~DiI~~~~~~-----~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (465)
...++.+|||||.+... +.....+..| +++++|+.... ... ..
T Consensus 276 ~~i~~~~~Div~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------------------~~~-----~~-------- 323 (568)
T 2vsy_A 276 KHIRHHGIDLLFDLRGWGGGGRPEVFALRPAP-VQVNWLAYPGT------------------SGA-----PW-------- 323 (568)
T ss_dssp HHHHHTTCSEEEECSSCTTCSSCHHHHTCCSS-EEEEESSSSSC------------------CCC-----TT--------
T ss_pred HHHHhCCCCEEEECCCCCCcchHHHHhcCCCc-eeEeeecCCcc------------------cCC-----CC--------
Confidence 11267789999975421 2222233346 78888863210 000 00
Q ss_pred HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHH
Q 044542 224 RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHP 303 (465)
Q Consensus 224 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~ 303 (465)
..+..+|.++++|+..++ |+ +++.+|||.++.....+ .......|+++|++++. +++ ++|++.+ ||++
T Consensus 324 ~~~~~~d~~i~~s~~~~~-----~~---~~i~~ipn~~~~~~~~~-~~~~~~~r~~~~~~~~~-~v~-~~g~~~~-K~~~ 391 (568)
T 2vsy_A 324 MDYVLGDAFALPPALEPF-----YS---EHVLRLQGAFQPSDTSR-VVAEPPSRTQCGLPEQG-VVL-CCFNNSY-KLNP 391 (568)
T ss_dssp CCEEEECTTTSCTTTGGG-----CS---SEEEECSSCSCCCCTTC-CCCCCCCTGGGTCCTTS-CEE-EECCCGG-GCCH
T ss_pred ceEEEECCCcCCcccccC-----Cc---ceeEcCCCcCCCCCCCC-CCCCCCCccccCCCCCC-EEE-EeCCccc-cCCH
Confidence 012346888888887543 33 78999999554332111 11234578899998765 555 8999999 9999
Q ss_pred HHHHHHHHhhhcCCCeEEEEEe-CCcchhHHHH----hc---CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHH
Q 044542 304 LLYEAFSSITRDHPGVYLLVAG-TGPWGRRYAE----LG---QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTL 375 (465)
Q Consensus 304 ~ll~a~~~l~~~~~~~~l~ivG-~g~~~~~~~~----l~---~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~ 375 (465)
.+++|+.++.++.|+++|+|+| +|+..+.+++ ++ ++|+|+|+++++++..+|+.+|++|+||.+ |+|+++
T Consensus 392 ~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~--~~g~~~ 469 (568)
T 2vsy_A 392 QSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPY--NAHTTA 469 (568)
T ss_dssp HHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSS--CCSHHH
T ss_pred HHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCC--CCcHHH
Confidence 9999999998888999999999 8877665554 32 689999999999999999999999999975 999999
Q ss_pred HHHHHcCCeEEe-------cCCC-------CcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHH-
Q 044542 376 IEAMHCGRTVLT-------PNYP-------SIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHA- 440 (465)
Q Consensus 376 ~EAma~G~PvI~-------s~~g-------g~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~- 440 (465)
+|||+||+|||+ |+.+ |.+ +++.+ |+++++++|.+++++ ++.+++|++++++.+
T Consensus 470 lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~-e~v~~---------~~~~la~~i~~l~~~-~~~~~~~~~~~~~~~~ 538 (568)
T 2vsy_A 470 SDALWTGCPVLTTPGETFAARVAGSLNHHLGLD-EMNVA---------DDAAFVAKAVALASD-PAALTALHARVDVLRR 538 (568)
T ss_dssp HHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCG-GGBCS---------SHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCEEeccCCCchHHHHHHHHHHCCCh-hhhcC---------CHHHHHHHHHHHhcC-HHHHHHHHHHHHHhhh
Confidence 999999999999 9999 887 66533 899999999999999 899999999999998
Q ss_pred -HhhCCHHHHHHHHHHHHHHhcCC
Q 044542 441 -LSMFTATKMASAYERFFLRMKNP 463 (465)
Q Consensus 441 -~~~fs~~~~~~~~~~~~~~~~~~ 463 (465)
.+.|+|+.++++++++|+++.++
T Consensus 539 ~~~~f~~~~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 539 ASGVFHMDGFADDFGALLQALARR 562 (568)
T ss_dssp HSSTTCHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHH
Confidence 67799999999999999988754
No 17
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=100.00 E-value=7.5e-34 Score=276.77 Aligned_cols=312 Identities=16% Similarity=0.126 Sum_probs=215.4
Q ss_pred CCceeEEEEeCC-CCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCC-------C-------CCCcccCCcceEEEe
Q 044542 77 FEKLKLAVFSKT-WPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDR-------K-------PHNDVHQGNLHVHFA 141 (465)
Q Consensus 77 ~~~mkIl~v~~~-~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~-------~-------~~~~~~~~~~~v~~~ 141 (465)
.++|||++++.. || +..+|.. ..+++.|+++| +|+|++..... . ........+..+...
T Consensus 12 ~~~MkIl~is~~~~p--~~~~~~~---~~l~~~l~~~G-~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 85 (406)
T 2hy7_A 12 IRRPCYLVLSSHDFR--TPRRANI---HFITDQLALRG-TTRFFSLRYSRLSRMKGDMRLPLDDTANTVVSHNGVDCYLW 85 (406)
T ss_dssp -CCSCEEEEESSCTT--SSSCCHH---HHHHHHHHHHS-CEEEEECSCBTTHHHHTCTTGGGGGGTTSEEEETTEEEEEC
T ss_pred CCCceEEEEecccCC--ChhhhhH---hHHHHHHHhCC-ceEEEEecccHHHHhhccchhhhhccCccceecCCeEEEee
Confidence 446999999998 87 3445543 34677788889 99999543210 0 000001122333322
Q ss_pred ecCCC------c----------cc----cC---C--CCCCcEEEecCCchhH--Hh--hhcCCcEEEEecchhHHHHhhh
Q 044542 142 ANDHG------S----------VN----LN---N--DGAFDYVHTESVSLPH--WR--AKMVPNVAVTWHGIWYEVMHSK 192 (465)
Q Consensus 142 ~~~~~------~----------~~----~~---~--~~~~DiI~~~~~~~~~--~~--~~~~p~~v~~~h~~~~~~~~~~ 192 (465)
..... . +. .. + ..++|+||.+...... .+ ..++| +++++|+.....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~DvIh~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~---- 160 (406)
T 2hy7_A 86 RTTVHPFNTRRSWLRPVEDAMFRWYAAHPPKQLLDWMRESDVIVFESGIAVAFIELAKRVNPA-AKLVYRASDGLS---- 160 (406)
T ss_dssp CBSSCCCCCCCGGGHHHHHHHHHHHHHCCCHHHHHHHHHCSEEEEESSGGGGGHHHHHHHCTT-SEEEEEESSCHH----
T ss_pred ccccCCccccchhhhccchhHHHHHHHhHHHHHHHHhcCCCEEEECCchHHHHHHHHHHhCCC-EEEEEeccchhh----
Confidence 11100 0 00 00 1 1279999965433222 22 23567 889999753210
Q ss_pred hhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCccc
Q 044542 193 LFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEA 272 (465)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~ 272 (465)
... . ......+ ++..++++|.++++|+..++.+.+ ++ ++.+||||+|.+.|.+....
T Consensus 161 ---~~~--~--------~~~~~~~-----~~~~~~~ad~vi~~S~~~~~~~~~-~~----~i~vipngvd~~~f~~~~~~ 217 (406)
T 2hy7_A 161 ---TIN--V--------ASYIERE-----FDRVAPTLDVIALVSPAMAAEVVS-RD----NVFHVGHGVDHNLDQLGDPS 217 (406)
T ss_dssp ---HHT--C--------CHHHHHH-----HHHHGGGCSEEEESCGGGGGGCSC-ST----TEEECCCCBCTTHHHHHCSC
T ss_pred ---ccc--c--------cHHHHHH-----HHHHHHhCCEEEEcCHHHHHHHHh-cC----CEEEEcCCcChHhcCccccc
Confidence 000 0 0111111 236688999999999999988765 23 89999999998877543211
Q ss_pred CcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh--cCCeEEcCCCChhH
Q 044542 273 GVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL--GQNVKVLGALEAHQ 350 (465)
Q Consensus 273 ~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l--~~~V~~~g~v~~~~ 350 (465)
+.+++.+++|+|++.+.||+ ++.+.++.++++|+|+|+|+ .+++ .++|+|+|++++++
T Consensus 218 ----------~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~l~ivG~g~----~~~~~l~~~V~f~G~~~~~~ 277 (406)
T 2hy7_A 218 ----------PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVTFHVIGSGM----GRHPGYGDNVIVYGEMKHAQ 277 (406)
T ss_dssp ----------SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEEEEEESCSS----CCCTTCCTTEEEECCCCHHH
T ss_pred ----------ccCCCcEEEEEeccccccCH------HHHHHHhCCCeEEEEEeCch----HHhcCCCCCEEEcCCCCHHH
Confidence 12233678899999999998 34444456899999999987 3333 38999999999999
Q ss_pred HHHHHHhcCeEEecccCCCCCcHHHHHHH-------HcCCeEEecCCCCcceeeeeeCCceEE-eCC-CHHHHHHHHHHH
Q 044542 351 LSEFYNALDVFVNPTLRPQGLDLTLIEAM-------HCGRTVLTPNYPSIVRTVVVNEELGYT-FSP-NVKSFVEALELV 421 (465)
Q Consensus 351 ~~~~~~~aDv~v~ps~~~eg~~~~~~EAm-------a~G~PvI~s~~gg~~~e~v~~~~~G~l-~~~-d~~~la~~i~~l 421 (465)
+.++|++||++|+||.. |++|++++||| +||+|||+|+. +.++.+|++ +++ |+++|+++|.++
T Consensus 278 l~~~~~~adv~v~ps~~-E~~~~~~lEAm~Kl~eYla~G~PVIas~~-------v~~~~~G~l~v~~~d~~~la~ai~~l 349 (406)
T 2hy7_A 278 TIGYIKHARFGIAPYAS-EQVPVYLADSSMKLLQYDFFGLPAVCPNA-------VVGPYKSRFGYTPGNADSVIAAITQA 349 (406)
T ss_dssp HHHHHHTCSEEECCBSC-SCCCTTHHHHCHHHHHHHHHTCCEEEEGG-------GTCSCSSEEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHhcCEEEECCCc-ccCchHHHHHHHHHHHHhhCCCcEEEehh-------cccCcceEEEeCCCCHHHHHHHHHHH
Confidence 99999999999999975 99999999999 99999999986 455778999 998 999999999999
Q ss_pred HhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH--HHHhc
Q 044542 422 IRDGPKVLQRKGLACKEHALSMFTATKMASAYERF--FLRMK 461 (465)
Q Consensus 422 l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~--~~~~~ 461 (465)
+++ ++ + ...+.|+|+.++++++++ |+++.
T Consensus 350 l~~-~~---------~-~~~~~~sw~~~a~~~~~~~~y~~~~ 380 (406)
T 2hy7_A 350 LEA-PR---------V-RYRQCLNWSDTTDRVLDPRAYPETR 380 (406)
T ss_dssp HHC-CC---------C-CCSCCCBHHHHHHHHHCGGGSGGGB
T ss_pred HhC-cc---------h-hhhhcCCHHHHHHHHHHhhcccccC
Confidence 998 43 1 234669999999999999 87654
No 18
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=100.00 E-value=5e-33 Score=267.87 Aligned_cols=312 Identities=16% Similarity=0.121 Sum_probs=227.2
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC--C---------c
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH--G---------S 147 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~--~---------~ 147 (465)
+|||++++. ..||.+..+..++++|.++||+|++++...... .......+..+....... . .
T Consensus 6 ~mkIl~~~~------~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 78 (364)
T 1f0k_A 6 GKRLMVMAG------GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRME-ADLVPKHGIEIDFIRISGLRGKGIKALIAAP 78 (364)
T ss_dssp -CEEEEECC------SSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTH-HHHGGGGTCEEEECCCCCCTTCCHHHHHTCH
T ss_pred CcEEEEEeC------CCccchhHHHHHHHHHHHcCCEEEEEecCCcch-hhhccccCCceEEecCCccCcCccHHHHHHH
Confidence 489999974 347999999999999999999999999865321 111222222333222110 0 0
Q ss_pred c----------ccCCCCCCcEEEecCCc--hhHH---hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhh
Q 044542 148 V----------NLNNDGAFDYVHTESVS--LPHW---RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTEL 212 (465)
Q Consensus 148 ~----------~~~~~~~~DiI~~~~~~--~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (465)
+ ...++.+||+||++... .... ...++| ++++.|+.... .
T Consensus 79 ~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p-~v~~~~~~~~~-----------------------~- 133 (364)
T 1f0k_A 79 LRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIP-VVLHEQNGIAG-----------------------L- 133 (364)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCC-EEEEECSSSCC-----------------------H-
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCC-EEEEecCCCCc-----------------------H-
Confidence 0 00156689999999753 2222 223678 88888874200 0
Q ss_pred hhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEE
Q 044542 213 QEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGV 292 (465)
Q Consensus 213 ~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~ 292 (465)
. .+...+.+|.+++.++.. ++ ++.+++||+|.+.+.+.. .+++++++++++.++++
T Consensus 134 ---~-----~~~~~~~~d~v~~~~~~~---------~~--~~~~i~n~v~~~~~~~~~-----~~~~~~~~~~~~~il~~ 189 (364)
T 1f0k_A 134 ---T-----NKWLAKIATKVMQAFPGA---------FP--NAEVVGNPVRTDVLALPL-----PQQRLAGREGPVRVLVV 189 (364)
T ss_dssp ---H-----HHHHTTTCSEEEESSTTS---------SS--SCEECCCCCCHHHHTSCC-----HHHHHTTCCSSEEEEEE
T ss_pred ---H-----HHHHHHhCCEEEecChhh---------cC--CceEeCCccchhhcccch-----hhhhcccCCCCcEEEEE
Confidence 1 113456789999988764 22 678999999987654421 24566776666567767
Q ss_pred eeccccccCHHHHHHHHHHhhhcCCCeE-EEEEeCCcchhHHH----Hhc-CCeEEcCCCChhHHHHHHHhcCeEEeccc
Q 044542 293 AGRLVRDKGHPLLYEAFSSITRDHPGVY-LLVAGTGPWGRRYA----ELG-QNVKVLGALEAHQLSEFYNALDVFVNPTL 366 (465)
Q Consensus 293 ~Grl~~~Kg~~~ll~a~~~l~~~~~~~~-l~ivG~g~~~~~~~----~l~-~~V~~~g~v~~~~~~~~~~~aDv~v~ps~ 366 (465)
.|++.+.||.+.+++|++.+.+ +++ ++++|+|+. +.++ +++ ++|.|+|++ +++.++|+.||++|+||
T Consensus 190 ~g~~~~~k~~~~li~a~~~l~~---~~~~l~i~G~~~~-~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~s- 262 (364)
T 1f0k_A 190 GGSQGARILNQTMPQVAAKLGD---SVTIWHQSGKGSQ-QSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVVVCRS- 262 (364)
T ss_dssp CTTTCCHHHHHHHHHHHHHHGG---GEEEEEECCTTCH-HHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEEEECC-
T ss_pred cCchHhHHHHHHHHHHHHHhcC---CcEEEEEcCCchH-HHHHHHHhhcCCCceEEecch--hhHHHHHHhCCEEEECC-
Confidence 7899999999999999999865 677 677898874 3333 344 689999999 79999999999999998
Q ss_pred CCCCCcHHHHHHHHcCCeEEecCCCCcce------eeeeeCCceEEeCC-C--HHHHHHHHHHHHhCChHHHHHHHHHHH
Q 044542 367 RPQGLDLTLIEAMHCGRTVLTPNYPSIVR------TVVVNEELGYTFSP-N--VKSFVEALELVIRDGPKVLQRKGLACK 437 (465)
Q Consensus 367 ~~eg~~~~~~EAma~G~PvI~s~~gg~~~------e~v~~~~~G~l~~~-d--~~~la~~i~~ll~~~~~~~~~~~~~~~ 437 (465)
| |++++|||++|+|||+++.+|..+ +.+.+.+.|+++++ | +++++++|.++ | ++.+++++++++
T Consensus 263 ---g-~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l--~-~~~~~~~~~~~~ 335 (364)
T 1f0k_A 263 ---G-ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--S-RETLLTMAERAR 335 (364)
T ss_dssp ---C-HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--C-HHHHHHHHHHHH
T ss_pred ---c-hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc--C-HHHHHHHHHHHH
Confidence 2 899999999999999999998642 13444556999998 7 99999999999 6 899999999999
Q ss_pred HHHHhhCCHHHHHHHHHHHHHHhc
Q 044542 438 EHALSMFTATKMASAYERFFLRMK 461 (465)
Q Consensus 438 ~~~~~~fs~~~~~~~~~~~~~~~~ 461 (465)
+.++ .|+|++++++++++|++..
T Consensus 336 ~~~~-~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 336 AASI-PDATERVANEVSRVARALE 358 (364)
T ss_dssp HTCC-TTHHHHHHHHHHHHHTTC-
T ss_pred Hhhc-cCHHHHHHHHHHHHHHHHH
Confidence 9875 5999999999999998753
No 19
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=100.00 E-value=3.8e-33 Score=269.81 Aligned_cols=334 Identities=14% Similarity=0.073 Sum_probs=229.5
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-C-cEEEEEeCCCCCCCCCcc-c-CCcce-EEEeecCC--Cc----
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-G-HEIHVFTAPSDRKPHNDV-H-QGNLH-VHFAANDH--GS---- 147 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G-~~V~v~~~~~~~~~~~~~-~-~~~~~-v~~~~~~~--~~---- 147 (465)
+|||++++...| ..| .+..++++|++. | |+|.+++........... . ..... +....... ..
T Consensus 8 ~mkIl~v~~~~~---~~~----~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (375)
T 3beo_A 8 RLKVMTIFGTRP---EAI----KMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLIDIT 80 (375)
T ss_dssp CEEEEEEECSHH---HHH----HHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHHTCCCSEECCCCCTTCCHHHHH
T ss_pred CceEEEEecCcH---HHH----HHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHcCCCCccccccCCCcccHHHHH
Confidence 589999986532 112 345788888876 4 888777654432110110 0 01110 11111111 10
Q ss_pred -------cccCCCCCCcEEEecCCchhH------HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhh
Q 044542 148 -------VNLNNDGAFDYVHTESVSLPH------WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQE 214 (465)
Q Consensus 148 -------~~~~~~~~~DiI~~~~~~~~~------~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (465)
....++.+||+||+|+..... ....++| ++.+.|+... + .... . ....
T Consensus 81 ~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip-~v~~~~~~~~-------~-------~~~~-~---~~~~ 141 (375)
T 3beo_A 81 TRGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIP-VGHVEAGLRT-------W-------DKYS-P---YPEE 141 (375)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCC-EEEESCCCCC-------S-------CTTS-S---TTHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEeccccc-------c-------cccC-C---ChhH
Confidence 011156789999998652211 1233667 7777675310 0 0000 0 0111
Q ss_pred hhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCC-CCCCCccCCcccCcccccccCCCCCCcEEEEEe
Q 044542 215 AMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNG-VDETKFVHDPEAGVRFPEKLGVPANVSLVMGVA 293 (465)
Q Consensus 215 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ng-vd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~ 293 (465)
...+ ...+.+|.++++|+..++.+.+ +|++++++.+++|| +|...+.+.......+++++ + +++++++++
T Consensus 142 ~~~~-----~~~~~~d~ii~~s~~~~~~~~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~--~-~~~~vl~~~ 212 (375)
T 3beo_A 142 MNRQ-----LTGVMADLHFSPTAKSATNLQK-ENKDESRIFITGNTAIDALKTTVKETYSHPVLEKL--G-NNRLVLMTA 212 (375)
T ss_dssp HHHH-----HHHHHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTT--T-TSEEEEEEC
T ss_pred hhhh-----HHhhhhheeeCCCHHHHHHHHH-cCCCcccEEEECChhHhhhhhhhhhhhhHHHHHhc--c-CCCeEEEEe
Confidence 1111 1234589999999999999987 68888899999999 78665544321223344444 2 344778899
Q ss_pred eccccc-cCHHHHHHHHHHhhhcCCCeEEEEEeCCcc---hhHHHHh-c--CCeEEcCCCChhHHHHHHHhcCeEEeccc
Q 044542 294 GRLVRD-KGHPLLYEAFSSITRDHPGVYLLVAGTGPW---GRRYAEL-G--QNVKVLGALEAHQLSEFYNALDVFVNPTL 366 (465)
Q Consensus 294 Grl~~~-Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~---~~~~~~l-~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps~ 366 (465)
||+.+. ||++.+++|++.+.+++|++++++ |.|+. .+.++++ . ++|+|+|+++..++..+|+.||++|+||
T Consensus 213 gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s- 290 (375)
T 3beo_A 213 HRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDS- 290 (375)
T ss_dssp CCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECC-
T ss_pred cccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECC-
Confidence 999875 999999999999988888998655 65543 3344443 3 7999999999899999999999999988
Q ss_pred CCCCCcHHHHHHHHcCCeEEecCC-CCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCC
Q 044542 367 RPQGLDLTLIEAMHCGRTVLTPNY-PSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFT 445 (465)
Q Consensus 367 ~~eg~~~~~~EAma~G~PvI~s~~-gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs 445 (465)
|.+++|||++|+|||+++. ++.+ +++.++ +|+++++|+++++++|.+++++ ++.+++|+++++++. +.|+
T Consensus 291 -----g~~~lEA~a~G~Pvi~~~~~~~~~-e~v~~g-~g~~v~~d~~~la~~i~~ll~~-~~~~~~~~~~~~~~~-~~~~ 361 (375)
T 3beo_A 291 -----GGVQEEAPSLGVPVLVLRDTTERP-EGIEAG-TLKLAGTDEETIFSLADELLSD-KEAHDKMSKASNPYG-DGRA 361 (375)
T ss_dssp -----HHHHHHHHHHTCCEEECSSCCSCH-HHHHTT-SEEECCSCHHHHHHHHHHHHHC-HHHHHHHCCCCCTTC-CSCH
T ss_pred -----CChHHHHHhcCCCEEEecCCCCCc-eeecCC-ceEEcCCCHHHHHHHHHHHHhC-hHhHhhhhhcCCCCC-CCcH
Confidence 5679999999999999964 8877 777666 9999977999999999999998 899999999988876 4699
Q ss_pred HHHHHHHHHHHHH
Q 044542 446 ATKMASAYERFFL 458 (465)
Q Consensus 446 ~~~~~~~~~~~~~ 458 (465)
|+++++.+.++++
T Consensus 362 ~~~i~~~~~~~~~ 374 (375)
T 3beo_A 362 SERIVEAILKHFN 374 (375)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988764
No 20
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=100.00 E-value=1.1e-33 Score=274.42 Aligned_cols=341 Identities=14% Similarity=0.124 Sum_probs=236.3
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCc-EEEEEeCCCCCCCCCc-ccC-Ccce-EEEeecC--CCcc-----
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGH-EIHVFTAPSDRKPHND-VHQ-GNLH-VHFAAND--HGSV----- 148 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~-~V~v~~~~~~~~~~~~-~~~-~~~~-v~~~~~~--~~~~----- 148 (465)
|||++++... ++ ...+..++++|.++|+ ++.++........... ... .... +...... ....
T Consensus 1 mkIl~v~~~~------~~-~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (384)
T 1vgv_A 1 MKVLTVFGTR------PE-AIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCR 73 (384)
T ss_dssp CEEEEEECSH------HH-HHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHHTCCCSEECCCCSTTSCHHHHHHH
T ss_pred CeEEEEeccc------HH-HHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHcCCCCCcceecCCCCccHHHHHHH
Confidence 7999998642 22 2346789999999984 8877655432221111 111 1110 1111100 0110
Q ss_pred ------ccCCCCCCcEEEecCC---chhHH---hhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhh
Q 044542 149 ------NLNNDGAFDYVHTESV---SLPHW---RAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAM 216 (465)
Q Consensus 149 ------~~~~~~~~DiI~~~~~---~~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (465)
...++.+||+||+|+. .+... ...++| ++.+.|+.... . .. . .+....
T Consensus 74 ~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip-~v~~~~~~~~~-------~-------~~-~----~~~~~~ 133 (384)
T 1vgv_A 74 ILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIP-VGHVEAGLRTG-------D-------LY-S----PWPEEA 133 (384)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCC-EEEESCCCCCS-------C-------TT-S----STTHHH
T ss_pred HHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEecccccc-------c-------cc-C----CCchHh
Confidence 1116678999999864 12211 233678 88888875210 0 00 0 011111
Q ss_pred HHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCC-CCCCccCCc-c----cCcccccccC-CCCCCcEE
Q 044542 217 PRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGV-DETKFVHDP-E----AGVRFPEKLG-VPANVSLV 289 (465)
Q Consensus 217 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~-~----~~~~~r~~~g-~~~~~~~~ 289 (465)
.+ ....+.+|.++++|+..++.+.+ +|++++++.+++||+ |...+.+.. . .+..+++++| ++.+++++
T Consensus 134 ~~----~~~~~~~d~ii~~s~~~~~~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 208 (384)
T 1vgv_A 134 NR----TLTGHLAMYHFSPTETSRQNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMI 208 (384)
T ss_dssp HH----HHHHTTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEE
T ss_pred hH----HHHHhhccEEEcCcHHHHHHHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEE
Confidence 11 11235699999999999999977 788888999999995 432221110 0 0124567777 76556678
Q ss_pred EEEeeccccc-cCHHHHHHHHHHhhhcCCCeEEEEE-eCCc-chhHHHHh-c--CCeEEcCCCChhHHHHHHHhcCeEEe
Q 044542 290 MGVAGRLVRD-KGHPLLYEAFSSITRDHPGVYLLVA-GTGP-WGRRYAEL-G--QNVKVLGALEAHQLSEFYNALDVFVN 363 (465)
Q Consensus 290 l~~~Grl~~~-Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~-~~~~~~~l-~--~~V~~~g~v~~~~~~~~~~~aDv~v~ 363 (465)
++++||+.+. ||++.+++|+..+.+++|+++++++ |.++ ..+.++++ . ++|+|+|+++.+++.++|+.||++|+
T Consensus 209 l~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ 288 (384)
T 1vgv_A 209 LVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILT 288 (384)
T ss_dssp EEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEE
T ss_pred EEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcEEEE
Confidence 8899999876 9999999999999888889999886 5443 44555554 2 68999999988999999999999999
Q ss_pred cccCCCCCcHHHHHHHHcCCeEEecCC-CCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHh
Q 044542 364 PTLRPQGLDLTLIEAMHCGRTVLTPNY-PSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALS 442 (465)
Q Consensus 364 ps~~~eg~~~~~~EAma~G~PvI~s~~-gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~ 442 (465)
|| |.+++|||++|+|||+++. ++.. +++.++ +|+++++|+++++++|.++++| ++.+++|+++++++. +
T Consensus 289 ~S------g~~~lEA~a~G~PvI~~~~~~~~~-e~v~~g-~g~lv~~d~~~la~~i~~ll~d-~~~~~~~~~~~~~~~-~ 358 (384)
T 1vgv_A 289 DS------GGIQEEAPSLGKPVLVMRDTTERP-EAVTAG-TVRLVGTDKQRIVEEVTRLLKD-ENEYQAMSRAHNPYG-D 358 (384)
T ss_dssp SS------STGGGTGGGGTCCEEEESSCCSCH-HHHHHT-SEEEECSSHHHHHHHHHHHHHC-HHHHHHHHSSCCTTC-C
T ss_pred CC------cchHHHHHHcCCCEEEccCCCCcc-hhhhCC-ceEEeCCCHHHHHHHHHHHHhC-hHHHhhhhhccCCCc-C
Confidence 98 2348999999999999986 7877 777776 9999977999999999999998 899999999988875 5
Q ss_pred hCCHHHHHHHHHHHHHHhcC
Q 044542 443 MFTATKMASAYERFFLRMKN 462 (465)
Q Consensus 443 ~fs~~~~~~~~~~~~~~~~~ 462 (465)
.|+|+++++.+.++|+++.+
T Consensus 359 ~~~~~~i~~~~~~~~~~~~~ 378 (384)
T 1vgv_A 359 GQACSRILEALKNNRISLGS 378 (384)
T ss_dssp SCHHHHHHHHHHHTCCCC--
T ss_pred CCHHHHHHHHHHHHHHhhcc
Confidence 59999999999998877654
No 21
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.97 E-value=4.2e-30 Score=253.61 Aligned_cols=300 Identities=15% Similarity=0.092 Sum_probs=201.8
Q ss_pred CCCCcEEEecCCc---hhHHhhh---cCCcEEEEecchhHHHH-h--h--hhhhhhhhcCCCCCCCchhhhhhhhHHHHH
Q 044542 153 DGAFDYVHTESVS---LPHWRAK---MVPNVAVTWHGIWYEVM-H--S--KLFGELFSNQNGVLPGSMTELQEAMPRLVD 221 (465)
Q Consensus 153 ~~~~DiI~~~~~~---~~~~~~~---~~p~~v~~~h~~~~~~~-~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (465)
..+|||+|+|.|. .+..++. .++ .|+++|....--. . . +++..+. ..+ ......-.......-.
T Consensus 179 ~~~pdIiH~HDW~tg~~~~~Lk~~~~~i~-tVfTiH~telGR~lagqg~~~~y~~L~-~~~---~d~ea~~~~i~~~~~~ 253 (725)
T 3nb0_A 179 SQHAIVAHFHEWLAGVALPLCRKRRIDVV-TIFTTHATLLGRYLCASGSFDFYNCLE-SVD---VDHEAGRFGIYHRYCI 253 (725)
T ss_dssp CSEEEEEEEESGGGCTHHHHHHHTTCSCE-EEEEESSCHHHHHHTSSSCSCHHHHGG-GCC---HHHHHHHTTCHHHHHH
T ss_pred CCCCcEEEeCchhhhHHHHHHHHhCCCCC-EEEEEecchhhhhhhhcCCCchhhhhh-hcC---CChhhhhhchhHHHHH
Confidence 4679999999873 2233332 345 9999998642211 0 1 1111110 000 0000000011122333
Q ss_pred HHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcc-------cCccc--------ccccCCCCCC
Q 044542 222 EIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPE-------AGVRF--------PEKLGVPANV 286 (465)
Q Consensus 222 ~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~-------~~~~~--------r~~~g~~~~~ 286 (465)
++.....||.|+++|+.+++.++..++.+.+.+ ||||+|.+.|.+... .+..+ ...++++.++
T Consensus 254 EKaga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk 331 (725)
T 3nb0_A 254 ERAAAHSADVFTTVSQITAFEAEHLLKRKPDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDN 331 (725)
T ss_dssp HHHHHHHSSEEEESSHHHHHHHHHHTSSCCSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGG
T ss_pred HHHHHHhCCEEEECCHHHHHHHHHHhcCCCCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCc
Confidence 456678999999999999999999888776655 999999999988521 11112 1233565556
Q ss_pred cEEEEEeeccc-cccCHHHHHHHHHHhhhc-------CCCeEEEEEeCCcch----------------------------
Q 044542 287 SLVMGVAGRLV-RDKGHPLLYEAFSSITRD-------HPGVYLLVAGTGPWG---------------------------- 330 (465)
Q Consensus 287 ~~~l~~~Grl~-~~Kg~~~ll~a~~~l~~~-------~~~~~l~ivG~g~~~---------------------------- 330 (465)
.++++.+||+. .+||++.+++|+.+|... ..-+.|+|+..+...
T Consensus 332 ~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ 411 (725)
T 3nb0_A 332 TLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGK 411 (725)
T ss_dssp EEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhH
Confidence 57777789999 689999999999988743 123567777543100
Q ss_pred -----------------------------------------------------------------hHHHHhc--CC----
Q 044542 331 -----------------------------------------------------------------RRYAELG--QN---- 339 (465)
Q Consensus 331 -----------------------------------------------------------------~~~~~l~--~~---- 339 (465)
+.+++++ ++
T Consensus 412 ~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~dr 491 (725)
T 3nb0_A 412 RIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDR 491 (725)
T ss_dssp HHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCS
T ss_pred HHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCc
Confidence 0011122 22
Q ss_pred --eEEc-CCCChh------HHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeC-------Cc
Q 044542 340 --VKVL-GALEAH------QLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNE-------EL 403 (465)
Q Consensus 340 --V~~~-g~v~~~------~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~-------~~ 403 (465)
|+|+ ++++.. ++.++|+.||++|+||.+ ||||++++||||||+|||+|+.||.. +.+.++ .+
T Consensus 492 VKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~-EgfGl~~LEAmA~G~PvI~s~~gG~~-d~V~dg~~~~~~~~t 569 (725)
T 3nb0_A 492 VKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYY-EPWGYTPAECTVMGVPSITTNVSGFG-SYMEDLIETNQAKDY 569 (725)
T ss_dssp EEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSS-BSSCHHHHHHHHTTCCEEEETTBHHH-HHHHTTSCHHHHHHT
T ss_pred eeEEEeccccCCCCccchhHHHHHHhhceEEEecccc-CCCCHHHHHHHHcCCCEEEeCCCChh-hhhhccccccCCCCc
Confidence 4555 566655 589999999999999986 99999999999999999999999998 776664 46
Q ss_pred eEEeC---C-CHHHHHHHH----HHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcC
Q 044542 404 GYTFS---P-NVKSFVEAL----ELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKN 462 (465)
Q Consensus 404 G~l~~---~-d~~~la~~i----~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~ 462 (465)
|+++. + ++++++++| ..++..+++.+.++++++++.++ .|+|++++++|+++|+.++.
T Consensus 570 G~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~-~FSWe~iA~~Yl~~Ye~aL~ 635 (725)
T 3nb0_A 570 GIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSD-LLDWKRMGLEYVKARQLALR 635 (725)
T ss_dssp TEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGG-GGBHHHHHHHHHHHHHHHHH
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHh
Confidence 98883 3 555555544 44444447788899998887765 59999999999999998764
No 22
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.97 E-value=1.4e-29 Score=249.49 Aligned_cols=200 Identities=12% Similarity=0.138 Sum_probs=165.0
Q ss_pred CCCEEEecCCCCCCCccCCccc-----CcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCC----eEE
Q 044542 251 QRNVHVILNGVDETKFVHDPEA-----GVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPG----VYL 321 (465)
Q Consensus 251 ~~ki~vi~ngvd~~~~~~~~~~-----~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~----~~l 321 (465)
..++.++|||||.+.|.+.... ...+|++++ ++ .+|+++||+.+.||++.+++|++++.+++|+ ++|
T Consensus 218 ~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~---~~-~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~L 293 (482)
T 1uqt_A 218 AFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELK---NV-QNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRY 293 (482)
T ss_dssp EEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTT---TC-EEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEE
T ss_pred EEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhC---CC-EEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEE
Confidence 3579999999998887542111 235677775 33 6677999999999999999999999887764 789
Q ss_pred EEEeCC-----cc----hhHHHHhc------------CCeE-EcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHH
Q 044542 322 LVAGTG-----PW----GRRYAELG------------QNVK-VLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAM 379 (465)
Q Consensus 322 ~ivG~g-----~~----~~~~~~l~------------~~V~-~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAm 379 (465)
+++|.+ +. ++.++++. ..|+ +.|.++.+++..+|+.||++++||.+ ||||++++|||
T Consensus 294 v~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~-EGfgLv~lEAm 372 (482)
T 1uqt_A 294 TQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLR-DGMNLVAKEYV 372 (482)
T ss_dssp EEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSS-BSCCHHHHHHH
T ss_pred EEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCc-ccCCchHHHHH
Confidence 999852 21 22333331 1366 47999999999999999999999986 99999999999
Q ss_pred HcCC-----eEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHH
Q 044542 380 HCGR-----TVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAY 453 (465)
Q Consensus 380 a~G~-----PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~ 453 (465)
|||+ |||+|+.+|.. +.+ .+|+++++ |+++++++|.++++++++.++++++++++++++ |||+.+++++
T Consensus 373 A~g~~~~~gpvV~S~~~G~~-~~l---~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-~s~~~~a~~~ 447 (482)
T 1uqt_A 373 AAQDPANPGVLVLSQFAGAA-NEL---TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-NDINHWQECF 447 (482)
T ss_dssp HHSCTTSCCEEEEETTBGGG-GTC---TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-TCHHHHHHHH
T ss_pred HhCCCCCCCCEEEECCCCCH-HHh---CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-CCHHHHHHHH
Confidence 9997 99999988887 444 27999999 999999999999997678889999999999977 8999999999
Q ss_pred HHHHHHh
Q 044542 454 ERFFLRM 460 (465)
Q Consensus 454 ~~~~~~~ 460 (465)
++.|+++
T Consensus 448 l~~l~~~ 454 (482)
T 1uqt_A 448 ISDLKQI 454 (482)
T ss_dssp HHHHHHS
T ss_pred HHHHHhc
Confidence 9999886
No 23
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.97 E-value=8.7e-30 Score=223.67 Aligned_cols=182 Identities=20% Similarity=0.322 Sum_probs=159.2
Q ss_pred ecCCCCCCCcc--CCcc----cCcccccccCCCCCCcEEEEEeeccc-cccCHHHHHHHHHHhh--hcCCCeEEEEEeCC
Q 044542 257 ILNGVDETKFV--HDPE----AGVRFPEKLGVPANVSLVMGVAGRLV-RDKGHPLLYEAFSSIT--RDHPGVYLLVAGTG 327 (465)
Q Consensus 257 i~ngvd~~~~~--~~~~----~~~~~r~~~g~~~~~~~~l~~~Grl~-~~Kg~~~ll~a~~~l~--~~~~~~~l~ivG~g 327 (465)
||||+|.+.|. +... .+..+|+++|++++ .+++++|++. +.||++.+++|+..+. +++++++|+++|.+
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~~--~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~ 79 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKG 79 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSC--EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCB
T ss_pred CCCccChhhccccccccchhhHHHHHHHHcCCCCC--CEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCC
Confidence 79999999998 6531 14568889998754 4777999999 9999999999999997 77789999999998
Q ss_pred c--chhHHHHhc---CCeEE-cCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeC
Q 044542 328 P--WGRRYAELG---QNVKV-LGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNE 401 (465)
Q Consensus 328 ~--~~~~~~~l~---~~V~~-~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~ 401 (465)
+ ..+.++++. .+|++ +|+++++++..+|+.||++++||.. |++|++++|||++|+|||+++.++.. +++ ++
T Consensus 80 ~~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~-e~~~~~~~Ea~a~G~PvI~~~~~~~~-e~~-~~ 156 (200)
T 2bfw_A 80 DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYF-EPFGLVALEAMCLGAIPIASAVGGLR-DII-TN 156 (200)
T ss_dssp CHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSC-CSSCHHHHHHHHTTCEEEEESCHHHH-HHC-CT
T ss_pred ChHHHHHHHHHHHhcCCEEEEeccCCHHHHHHHHHHCCEEEECCCC-CCccHHHHHHHHCCCCEEEeCCCChH-HHc-CC
Confidence 7 655555443 39999 9999999999999999999999986 99999999999999999999999998 787 89
Q ss_pred CceEEeCC-CHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHhhCC
Q 044542 402 ELGYTFSP-NVKSFVEALELVIR-DGPKVLQRKGLACKEHALSMFT 445 (465)
Q Consensus 402 ~~G~l~~~-d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~~fs 445 (465)
.+|+++++ |+++++++|.++++ + ++.++++++++++++++ ||
T Consensus 157 ~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~a~~~~~~-fs 200 (200)
T 2bfw_A 157 ETGILVKAGDPGELANAILKALELS-RSDLSKFRENCKKRAMS-FS 200 (200)
T ss_dssp TTCEEECTTCHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHH-TC
T ss_pred CceEEecCCCHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHh-cC
Confidence 99999998 99999999999999 8 99999999999999988 76
No 24
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.95 E-value=7.2e-28 Score=204.76 Aligned_cols=158 Identities=18% Similarity=0.309 Sum_probs=133.7
Q ss_pred cEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh----cCCeEEcCCCChhHHHHHHHhcCeEE
Q 044542 287 SLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL----GQNVKVLGALEAHQLSEFYNALDVFV 362 (465)
Q Consensus 287 ~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l----~~~V~~~g~v~~~~~~~~~~~aDv~v 362 (465)
+++|+++|++.+.||++.+++|+..+++ .++++|+++|+|+..+.++++ +.+|.+ |+++.+++.++|+.||+++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~-~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v 79 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKY-KQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYV 79 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTT-GGGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhcc-CCCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEE
Confidence 4788999999999999999999999854 389999999999877666554 358888 9999999999999999999
Q ss_pred ecccCCCCCcHHHHHHHHcCC-eEEe-cCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 044542 363 NPTLRPQGLDLTLIEAMHCGR-TVLT-PNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEH 439 (465)
Q Consensus 363 ~ps~~~eg~~~~~~EAma~G~-PvI~-s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~ 439 (465)
+||.. |++|++++|||++|+ |||+ ++.++.. +++.++.+ ++++ |+++++++|.+++++ ++.+++++++++++
T Consensus 80 ~ps~~-e~~~~~~~Eama~G~vPvi~~~~~~~~~-~~~~~~~~--~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~ 154 (166)
T 3qhp_A 80 HAANV-ESEAIACLEAISVGIVPVIANSPLSATR-QFALDERS--LFEPNNAKDLSAKIDWWLEN-KLERERMQNEYAKS 154 (166)
T ss_dssp ECCCS-CCCCHHHHHHHHTTCCEEEECCTTCGGG-GGCSSGGG--EECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred ECCcc-cCccHHHHHHHhcCCCcEEeeCCCCchh-hhccCCce--EEcCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence 99985 999999999999998 9999 5577776 77766544 7777 999999999999998 99999999999999
Q ss_pred HHhhCCHHHHHHH
Q 044542 440 ALSMFTATKMASA 452 (465)
Q Consensus 440 ~~~~fs~~~~~~~ 452 (465)
+ ++|+|++++++
T Consensus 155 ~-~~~s~~~~~~~ 166 (166)
T 3qhp_A 155 A-LNYTLENSVIQ 166 (166)
T ss_dssp H-HHHC-------
T ss_pred H-HHCChhhhhcC
Confidence 8 66999998764
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.95 E-value=3.4e-28 Score=235.11 Aligned_cols=331 Identities=15% Similarity=0.065 Sum_probs=215.8
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-CcEEEEEeCCCCCCCCCc-ccCCcce--EEEeec-CCCc------
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GHEIHVFTAPSDRKPHND-VHQGNLH--VHFAAN-DHGS------ 147 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~-~~~~~~~--v~~~~~-~~~~------ 147 (465)
+|||++++...| .. | ....++++|.+. ||+|.+++.......... ....+.. +..... ....
T Consensus 5 mmkIl~v~~~~~---~~-~---~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (376)
T 1v4v_A 5 MKRVVLAFGTRP---EA-T---KMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAA 77 (376)
T ss_dssp CEEEEEEECSHH---HH-H---HHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHH
T ss_pred ceEEEEEEeccH---HH-H---HHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHHcCCCcccccccCCCCccHHHHHH
Confidence 489999997532 11 2 246789999988 899887765432110011 1111111 111110 0000
Q ss_pred ------cccCCCCCCcEEEecCCc---hh---HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhh
Q 044542 148 ------VNLNNDGAFDYVHTESVS---LP---HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEA 215 (465)
Q Consensus 148 ------~~~~~~~~~DiI~~~~~~---~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (465)
....++.+||+||+|+.. +. .....++| ++...++... + .. +.......
T Consensus 78 ~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip-~v~~~~~~~~-------~--------~~---~~~~~~~~ 138 (376)
T 1v4v_A 78 RILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIP-VGHVEAGLRS-------G--------NL---KEPFPEEA 138 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCC-EEEETCCCCC-------S--------CT---TSSTTHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCC-EEEEeCCCcc-------c--------cc---cCCCchHH
Confidence 011157799999998642 11 11223677 6544333210 0 00 00000111
Q ss_pred hHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCC-CCCCccCCcccCcccccccCCCCCCcEEEEEee
Q 044542 216 MPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGV-DETKFVHDPEAGVRFPEKLGVPANVSLVMGVAG 294 (465)
Q Consensus 216 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~G 294 (465)
.. ....+.+|.++++|+..++.+.+ +|++++++.+++|++ |...+... +..++++++ +++++++++|
T Consensus 139 ~~-----~~~~~~~~~~~~~s~~~~~~l~~-~g~~~~ki~vi~n~~~d~~~~~~~---~~~~~~~~~---~~~~vl~~~g 206 (376)
T 1v4v_A 139 NR-----RLTDVLTDLDFAPTPLAKANLLK-EGKREEGILVTGQTGVDAVLLAAK---LGRLPEGLP---EGPYVTVTMH 206 (376)
T ss_dssp HH-----HHHHHHCSEEEESSHHHHHHHHT-TTCCGGGEEECCCHHHHHHHHHHH---HCCCCTTCC---SSCEEEECCC
T ss_pred HH-----HHHHHHhceeeCCCHHHHHHHHH-cCCCcceEEEECCchHHHHhhhhh---hhHHHHhcC---CCCEEEEEeC
Confidence 11 12345689999999999999987 688888999999975 43222111 123444442 3347777899
Q ss_pred ccccccCHHHHHHHHHHhhhcCCCeEEEEE-eCCc-chhHHHHh---cCCeEEcCCCChhHHHHHHHhcCeEEecccCCC
Q 044542 295 RLVRDKGHPLLYEAFSSITRDHPGVYLLVA-GTGP-WGRRYAEL---GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQ 369 (465)
Q Consensus 295 rl~~~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~-~~~~~~~l---~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~e 369 (465)
|+...||++.+++|++.+.+++|+++++++ |+++ ..+.++++ .++|+|+|+++..++..+|+.||++|.|| +
T Consensus 207 r~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~~v~~S---~ 283 (376)
T 1v4v_A 207 RRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS---G 283 (376)
T ss_dssp CGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC---H
T ss_pred cccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcEEEECC---c
Confidence 998888999999999999887888998886 7665 45555554 26899999998889999999999999988 3
Q ss_pred CCcHHHHHHHHcCCeEEec-CCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHH
Q 044542 370 GLDLTLIEAMHCGRTVLTP-NYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATK 448 (465)
Q Consensus 370 g~~~~~~EAma~G~PvI~s-~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~ 448 (465)
|+ ++|||++|+|||++ +.++.. +++. +++|++++.|+++|+++|.++++| ++.+++|++++ +.|.+..
T Consensus 284 --g~-~lEA~a~G~PvI~~~~~~~~~-~~~~-~g~g~lv~~d~~~la~~i~~ll~d-~~~~~~~~~~~-----~~~~~~~ 352 (376)
T 1v4v_A 284 --GL-QEEGAALGVPVVVLRNVTERP-EGLK-AGILKLAGTDPEGVYRVVKGLLEN-PEELSRMRKAK-----NPYGDGK 352 (376)
T ss_dssp --HH-HHHHHHTTCCEEECSSSCSCH-HHHH-HTSEEECCSCHHHHHHHHHHHHTC-HHHHHHHHHSC-----CSSCCSC
T ss_pred --CH-HHHHHHcCCCEEeccCCCcch-hhhc-CCceEECCCCHHHHHHHHHHHHhC-hHhhhhhcccC-----CCCCCCh
Confidence 33 88999999999987 567776 6654 458999866999999999999998 88888888643 3355555
Q ss_pred HHHHHHHHHHHhc
Q 044542 449 MASAYERFFLRMK 461 (465)
Q Consensus 449 ~~~~~~~~~~~~~ 461 (465)
.++++.+.+.++.
T Consensus 353 ~~~~i~~~i~~~~ 365 (376)
T 1v4v_A 353 AGLMVARGVAWRL 365 (376)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 6666666666554
No 26
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.95 E-value=1.5e-26 Score=224.80 Aligned_cols=276 Identities=13% Similarity=0.101 Sum_probs=204.8
Q ss_pred CCCcEEEecCCc---hhHHhhhcCCc--EEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhh-hhHHHHHHHHhhc
Q 044542 154 GAFDYVHTESVS---LPHWRAKMVPN--VAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQE-AMPRLVDEIRFFS 227 (465)
Q Consensus 154 ~~~DiI~~~~~~---~~~~~~~~~p~--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 227 (465)
..-|+|.+|++. ++..+....|+ +.+.+|-.++. .+++..+ -. +-..++ ..+-
T Consensus 148 ~~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs---~e~f~~L---------------p~~~r~ell---~gll 206 (496)
T 3t5t_A 148 SADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPS---ADYWRIL---------------PKEIRTGIL---HGML 206 (496)
T ss_dssp CSSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCC---HHHHTTS---------------CHHHHHHHH---HHHT
T ss_pred CCCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCC---HHHHhhC---------------cHhHHHHHH---HHHH
Confidence 357899999874 34455443332 88888864321 1122111 00 111111 4467
Q ss_pred ccCEEEEeChhHHHHHHH----Hh-CCCC-------------CCEEEecCCCCCCCccCCcc-cCcccccccCCCCCCcE
Q 044542 228 SYNQHICISNSAAEVLVK----IY-QLPQ-------------RNVHVILNGVDETKFVHDPE-AGVRFPEKLGVPANVSL 288 (465)
Q Consensus 228 ~~d~ii~~S~~~~~~~~~----~~-~~~~-------------~ki~vi~ngvd~~~~~~~~~-~~~~~r~~~g~~~~~~~ 288 (465)
.+|.|.+.+....+.+.+ .+ |.+. .++.++|+|||.+.|.+... ....+|++++ ++ .
T Consensus 207 ~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~---~~-~ 282 (496)
T 3t5t_A 207 PATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWAD---GH-R 282 (496)
T ss_dssp TSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHT---TS-E
T ss_pred hCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhC---Cc-e
Confidence 899999999887776554 23 3221 36789999999999876532 2356777776 34 5
Q ss_pred EEEEeeccccccCHHHHHHHHHHhhhcCCC---eEEEEEeC-----Ccc----hhHHHHhc---------CCeEEcCCCC
Q 044542 289 VMGVAGRLVRDKGHPLLYEAFSSITRDHPG---VYLLVAGT-----GPW----GRRYAELG---------QNVKVLGALE 347 (465)
Q Consensus 289 ~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~---~~l~ivG~-----g~~----~~~~~~l~---------~~V~~~g~v~ 347 (465)
+|+++||+.+.||++.+++|+ ++.+++|+ +.|+++|. ++. ++.++++. ..|+|+|.++
T Consensus 283 lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~ 361 (496)
T 3t5t_A 283 LVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDND 361 (496)
T ss_dssp EEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred EEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCC
Confidence 666999999999999999999 88888775 56888863 222 22333331 1699999999
Q ss_pred hhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcC---CeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHh
Q 044542 348 AHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCG---RTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIR 423 (465)
Q Consensus 348 ~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G---~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~ 423 (465)
.+++..+|+.||++++||.+ ||||++.+|||||| .|+|+|+.+|.. +.+ +++|++++| |+++++++|.+++.
T Consensus 362 ~~el~aly~~ADv~vv~Slr-EGfgLv~~EamA~~~~~g~lVlSe~aGa~-~~l--~~~allVnP~D~~~lA~AI~~aL~ 437 (496)
T 3t5t_A 362 VNHTIACFRRADLLIFNSTV-DGQNLSTFEAPLVNERDADVILSETCGAA-EVL--GEYCRSVNPFDLVEQAEAISAALA 437 (496)
T ss_dssp HHHHHHHHHHCSEEEECCSS-BSCCSHHHHHHHHCSSCCEEEEETTBTTH-HHH--GGGSEEECTTBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccEEEECccc-ccCChhHHHHHHhCCCCCCEEEeCCCCCH-HHh--CCCEEEECCCCHHHHHHHHHHHHc
Confidence 99999999999999999987 99999999999997 899999999988 444 347999999 99999999999999
Q ss_pred CChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 044542 424 DGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRM 460 (465)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~ 460 (465)
++++.++++.++.++++.+ ++.+..++.+++-++..
T Consensus 438 m~~~er~~r~~~~~~~V~~-~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 438 AGPRQRAEAAARRRDAARP-WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp CCHHHHHHHHHHHHHHHTT-CBHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHhhc
Confidence 9778889999999999977 89999999999888754
No 27
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.94 E-value=1.1e-26 Score=223.53 Aligned_cols=299 Identities=12% Similarity=0.043 Sum_probs=201.3
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCC-CCcccCCcce-EEEeecCC--CccccCCCCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKP-HNDVHQGNLH-VHFAANDH--GSVNLNNDGAF 156 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~-~~~~~~~~~~-v~~~~~~~--~~~~~~~~~~~ 156 (465)
+|.+-+.+ .|..+.+..|+++|.++| +|.+.+....... .......... .. .+... ...++.++.+|
T Consensus 42 ~iwih~~s-------~G~~~~~~~L~~~L~~~~-~v~v~~~~~~~~~~~~~~~~~v~~~~~-~p~~~~~~l~~~l~~~~p 112 (374)
T 2xci_A 42 ALWVHTAS-------IGEFNTFLPILKELKREH-RILLTYFSPRAREYLKTKSDFYDCLHP-LPLDNPFSVKRFEELSKP 112 (374)
T ss_dssp CEEEECSS-------HHHHHHHHHHHHHHHHHS-CEEEEESCGGGHHHHHTTGGGCSEEEE-CCCSSHHHHHHHHHHHCC
T ss_pred CEEEEcCC-------HHHHHHHHHHHHHHHhcC-CEEEEEcCCcHHHHHHHhcccccceeE-CCCCCHHHHHHHHHHhCC
Confidence 56665533 577888999999999998 8876665432211 0111111110 11 11110 01112266789
Q ss_pred cEEEecCCc-hhHHh--hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhcccCEEE
Q 044542 157 DYVHTESVS-LPHWR--AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFSSYNQHI 233 (465)
Q Consensus 157 DiI~~~~~~-~~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 233 (465)
|+||++... ++..+ ... | ++...+... . +. + .+..++++|.++
T Consensus 113 Div~~~~~~~~~~~~~~~~~-p-~~~~~~~~~-----------------~------~~----~-----~~~~~~~~d~ii 158 (374)
T 2xci_A 113 KALIVVEREFWPSLIIFTKV-P-KILVNAYAK-----------------G------SL----I-----EKILSKKFDLII 158 (374)
T ss_dssp SEEEEESCCCCHHHHHHCCS-C-EEEEEECCC-----------------C------CH----H-----HHHHHTTCSEEE
T ss_pred CEEEEECccCcHHHHHHHhC-C-EEEEEeecC-----------------c------hH----H-----HHHHHHhCCEEE
Confidence 999976432 22222 122 5 544332210 0 01 1 125578899999
Q ss_pred EeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhh
Q 044542 234 CISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSIT 313 (465)
Q Consensus 234 ~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~ 313 (465)
++|+..++.+.+ +|++ ++.+++|+. |...... ++. + .. .++++.|+ ..||++.+++|++.+.
T Consensus 159 ~~S~~~~~~l~~-~g~~--ki~vi~n~~----f~~~~~~----~~~--l--~~-~vi~~~~~--~~k~~~~ll~A~~~l~ 220 (374)
T 2xci_A 159 MRTQEDVEKFKT-FGAK--RVFSCGNLK----FICQKGK----GIK--L--KG-EFIVAGSI--HTGEVEIILKAFKEIK 220 (374)
T ss_dssp ESCHHHHHHHHT-TTCC--SEEECCCGG----GCCCCCS----CCC--C--SS-CEEEEEEE--CGGGHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHH-cCCC--eEEEcCCCc----cCCCcCh----hhh--h--cC-CEEEEEeC--CCchHHHHHHHHHHHH
Confidence 999999999988 5876 999999973 2221111 111 1 11 34445554 4689999999999999
Q ss_pred hcCCCeEEEEEeCCcch-hHHHHh----c----------CCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHH
Q 044542 314 RDHPGVYLLVAGTGPWG-RRYAEL----G----------QNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEA 378 (465)
Q Consensus 314 ~~~~~~~l~ivG~g~~~-~~~~~l----~----------~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EA 378 (465)
+++|+++|+|+|+|+.+ +.++++ + .+|.+.|.. +|+..+|+.||++++||...|++|++++||
T Consensus 221 ~~~p~~~lvivG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~vl~ss~~e~gg~~~lEA 298 (374)
T 2xci_A 221 KTYSSLKLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAIVGGTFVNIGGHNLLEP 298 (374)
T ss_dssp TTCTTCEEEEEESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEEECSSSSSSCCCCCHHH
T ss_pred hhCCCcEEEEECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEEECCcccCCCCcCHHHH
Confidence 88899999999998865 344432 2 257788876 799999999999888765547789999999
Q ss_pred HHcCCeEEec-CCCCcceeeeeeC-CceEEeCC-CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCC
Q 044542 379 MHCGRTVLTP-NYPSIVRTVVVNE-ELGYTFSP-NVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFT 445 (465)
Q Consensus 379 ma~G~PvI~s-~~gg~~~e~v~~~-~~G~l~~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs 445 (465)
|+||+|||++ +.++.+ +++.+. .+|.++.+ |+++|+++|.++++| +.+++|+++++++++++++
T Consensus 299 mA~G~PVI~~~~~~~~~-e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d--~~r~~mg~~ar~~~~~~~g 365 (374)
T 2xci_A 299 TCWGIPVIYGPYTHKVN-DLKEFLEKEGAGFEVKNETELVTKLTELLSV--KKEIKVEEKSREIKGCYLE 365 (374)
T ss_dssp HTTTCCEEECSCCTTSH-HHHHHHHHTTCEEECCSHHHHHHHHHHHHHS--CCCCCHHHHHHHHHHHHHH
T ss_pred HHhCCCEEECCCccChH-HHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHhccc
Confidence 9999999975 778887 666542 46788887 999999999999996 6788999999999988643
No 28
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.92 E-value=2.7e-25 Score=190.78 Aligned_cols=140 Identities=24% Similarity=0.339 Sum_probs=122.3
Q ss_pred cCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh--------cCCeEEcCCCChhHH
Q 044542 280 LGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL--------GQNVKVLGALEAHQL 351 (465)
Q Consensus 280 ~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l--------~~~V~~~g~v~~~~~ 351 (465)
+.++.++ .+++|+|++.+.||++.+++|++.+ ++++|+++|.++..+.++++ .++|.|+|+++++++
T Consensus 17 ~~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~ 91 (177)
T 2f9f_A 17 FKFKCYG-DFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEEL 91 (177)
T ss_dssp CCCCCCC-SCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHH
T ss_pred cccCCCC-CEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHH
Confidence 3345555 5667999999999999999999998 68899999998765433322 269999999999999
Q ss_pred HHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhCChHH
Q 044542 352 SEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRDGPKV 428 (465)
Q Consensus 352 ~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~~~~~ 428 (465)
..+|+.||++++||.. |++|++++|||++|+|||+++.++.. +++.++.+|+++ + |+++++++|.+++++ ++.
T Consensus 92 ~~~~~~adi~v~ps~~-e~~~~~~~Eama~G~PvI~~~~~~~~-e~i~~~~~g~~~-~~d~~~l~~~i~~l~~~-~~~ 165 (177)
T 2f9f_A 92 IDLYSRCKGLLCTAKD-EDFGLTPIEAMASGKPVIAVNEGGFK-ETVINEKTGYLV-NADVNEIIDAMKKVSKN-PDK 165 (177)
T ss_dssp HHHHHHCSEEEECCSS-CCSCHHHHHHHHTTCCEEEESSHHHH-HHCCBTTTEEEE-CSCHHHHHHHHHHHHHC-TTT
T ss_pred HHHHHhCCEEEeCCCc-CCCChHHHHHHHcCCcEEEeCCCCHH-HHhcCCCccEEe-CCCHHHHHHHHHHHHhC-HHH
Confidence 9999999999999975 99999999999999999999999988 888899999999 6 999999999999998 543
No 29
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.92 E-value=2.6e-23 Score=195.39 Aligned_cols=301 Identities=9% Similarity=-0.027 Sum_probs=198.4
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC-CcccCCcceEEEeecCCCccccCCCCCCc
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH-NDVHQGNLHVHFAANDHGSVNLNNDGAFD 157 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~D 157 (465)
-|++-+... |-. ....++...-....+.+.+.|++-.-+......... ..... ... + ....-.++|
T Consensus 10 ~m~~~i~~~-~~~-~~~~a~~ka~~dv~~i~~~~G~~~l~~~~~~~~~~~~~~~~~------~~~---~--~~~~~~~~D 76 (339)
T 3rhz_A 10 CMRVYITNI-NGQ-SIQSTAQLCQNTVTDVAVSLGYRELGIYCYQIHTDSESELSK------RLD---G--IVAGLRHGD 76 (339)
T ss_dssp CCCEEEEEE-ESS-CTTCHHHHHHHHHHHHHHHTTCEEEEEECCCGGGSCHHHHHH------HHH---H--HTTTCCTTC
T ss_pred hhheeeecc-cCc-cccchHHHHHHHHHHHHHHCCCeEEEeeccccccccHHHHHH------HHH---H--HHhcCCCCC
Confidence 466554443 321 234455666667777777889976555433211111 11000 000 0 011356799
Q ss_pred EEEecCCch---------hHHhh-hcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhhc
Q 044542 158 YVHTESVSL---------PHWRA-KMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFFS 227 (465)
Q Consensus 158 iI~~~~~~~---------~~~~~-~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (465)
+|+++++.+ ..++. .+.| ++..+||+++..... ... . ...|+..++
T Consensus 77 vIi~q~P~~~~~~~~~~~~~~lk~~~~k-~i~~ihDl~pl~~~~------------------~~~---~--~~~E~~~y~ 132 (339)
T 3rhz_A 77 VVIFQTPTWNTTEFDEKLMNKLKLYDIK-IVLFIHDVVPLMFSG------------------NFY---L--MDRTIAYYN 132 (339)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHTTSSCE-EEEEESCCHHHHCGG------------------GGG---G--HHHHHHHHT
T ss_pred EEEEeCCCcchhhHHHHHHHHHHhcCCE-EEEEecccHHhhCcc------------------chh---h--HHHHHHHHH
Confidence 999987642 11111 1455 999999997653210 010 1 113568899
Q ss_pred ccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccCHHHHHH
Q 044542 228 SYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYE 307 (465)
Q Consensus 228 ~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~ 307 (465)
++|.|+++|+.+++.+.+ .|++..++.++++. |.. .+.+ . ..+ ..+.+++|+|++.....++
T Consensus 133 ~aD~Ii~~S~~~~~~l~~-~G~~~~ki~~~~~~-~~~--~~~~-----~----~~~-~~~~~i~yaG~l~k~~~L~---- 194 (339)
T 3rhz_A 133 KADVVVAPSQKMIDKLRD-FGMNVSKTVVQGMW-DHP--TQAP-----M----FPA-GLKREIHFPGNPERFSFVK---- 194 (339)
T ss_dssp TCSEEEESCHHHHHHHHH-TTCCCSEEEECCSC-CCC--CCCC-----C----CCC-EEEEEEEECSCTTTCGGGG----
T ss_pred HCCEEEECCHHHHHHHHH-cCCCcCceeecCCC-Ccc--Cccc-----c----ccc-CCCcEEEEeCCcchhhHHH----
Confidence 999999999999999988 68877777655442 211 0100 0 011 2237788999998532221
Q ss_pred HHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccC------CCCCcHHHHHHHHc
Q 044542 308 AFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLR------PQGLDLTLIEAMHC 381 (465)
Q Consensus 308 a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~------~eg~~~~~~EAma~ 381 (465)
.+ .++++|+|+|+|+.+ ++. +|+|+|++|.+++..+++.+|+.++.... ..++|.+++||||+
T Consensus 195 ---~l---~~~~~f~ivG~G~~~----~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~ 263 (339)
T 3rhz_A 195 ---EW---KYDIPLKVYTWQNVE----LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAA 263 (339)
T ss_dssp ---GC---CCSSCEEEEESCCCC----CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHH
T ss_pred ---hC---CCCCeEEEEeCCccc----CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHc
Confidence 22 378999999999875 344 99999999999999999999998885110 13579999999999
Q ss_pred CCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHH
Q 044542 382 GRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMAS 451 (465)
Q Consensus 382 G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~ 451 (465)
|+|||+++.++.. +++.++++|++++ +.++++++|..+ . ++.+++|++++++..++ +++....+
T Consensus 264 G~PVI~~~~~~~~-~~v~~~~~G~~~~-~~~e~~~~i~~l--~-~~~~~~m~~na~~~a~~-~~~~~f~k 327 (339)
T 3rhz_A 264 GIPVIVQEGIANQ-ELIENNGLGWIVK-DVEEAIMKVKNV--N-EDEYIELVKNVRSFNPI-LRKGFFTR 327 (339)
T ss_dssp TCCEEEETTCTTT-HHHHHHTCEEEES-SHHHHHHHHHHC--C-HHHHHHHHHHHHHHTHH-HHTTHHHH
T ss_pred CCCEEEccChhHH-HHHHhCCeEEEeC-CHHHHHHHHHHh--C-HHHHHHHHHHHHHHHHH-hhccHHHH
Confidence 9999999999998 8999999999998 788999988876 2 56789999999887554 44444433
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.91 E-value=2.6e-24 Score=208.26 Aligned_cols=335 Identities=15% Similarity=0.150 Sum_probs=215.7
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-CcEEEEEeCCCCCCCCC---cccCCcceEEEeecCCC--c---
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GHEIHVFTAPSDRKPHN---DVHQGNLHVHFAANDHG--S--- 147 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~---~~~~~~~~v~~~~~~~~--~--- 147 (465)
+++|||++|+..- .|. ..+..++++|.+. |+++.++.......... +.....+.........+ .
T Consensus 23 ~~m~ki~~v~Gtr------~~~-~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~ 95 (396)
T 3dzc_A 23 NAMKKVLIVFGTR------PEA-IKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGV 95 (396)
T ss_dssp -CCEEEEEEECSH------HHH-HHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECCCCCTTCCHHHH
T ss_pred CCCCeEEEEEecc------HhH-HHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeeecCCCCCCHHHH
Confidence 4458999999753 233 3457799999987 78987666654321000 10111111221111010 1
Q ss_pred --------cccCCCCCCcEEEecCCc---hh---HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhh
Q 044542 148 --------VNLNNDGAFDYVHTESVS---LP---HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQ 213 (465)
Q Consensus 148 --------~~~~~~~~~DiI~~~~~~---~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (465)
....++.+||+|++++.. ++ .....++| ++...++.... .... .+.
T Consensus 96 ~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IP-v~h~~ag~rs~---------------~~~~----~~~ 155 (396)
T 3dzc_A 96 TSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIP-VGHVEAGLRTG---------------NIYS----PWP 155 (396)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCC-EEEETCCCCCS---------------CTTS----STT
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCC-EEEEECCcccc---------------cccc----CCc
Confidence 011167899999998642 22 22234678 65544432100 0000 010
Q ss_pred hhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCC-CCCCccCCcc-c----CcccccccC-CCCCC
Q 044542 214 EAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGV-DETKFVHDPE-A----GVRFPEKLG-VPANV 286 (465)
Q Consensus 214 ~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~~-~----~~~~r~~~g-~~~~~ 286 (465)
....+. ...+.+|.+++.|+..++.+.+ .|++++++.+++|++ |...+.+... . +..+++++| ++.++
T Consensus 156 ~~~~r~----~~~~~a~~~~~~se~~~~~l~~-~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~ 230 (396)
T 3dzc_A 156 EEGNRK----LTAALTQYHFAPTDTSRANLLQ-ENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASK 230 (396)
T ss_dssp HHHHHH----HHHHTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTS
T ss_pred HHHHHH----HHHHhcCEEECCCHHHHHHHHH-cCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCC
Confidence 111111 1235689999999999999988 799989999999964 4322221110 0 246778888 46566
Q ss_pred cEEEEEeecccc-ccCHHHHHHHHHHhhhcCCCeEEEEE-eCCc-chhHHHHh-c--CCeEEcCCCChhHHHHHHHhcCe
Q 044542 287 SLVMGVAGRLVR-DKGHPLLYEAFSSITRDHPGVYLLVA-GTGP-WGRRYAEL-G--QNVKVLGALEAHQLSEFYNALDV 360 (465)
Q Consensus 287 ~~~l~~~Grl~~-~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~-~~~~~~~l-~--~~V~~~g~v~~~~~~~~~~~aDv 360 (465)
++++++.+|... .|+++.+++|+..+.+++|++++++. |.++ .++.++++ . ++|.+++++++.++..+|+.||+
T Consensus 231 ~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~ 310 (396)
T 3dzc_A 231 KLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI 310 (396)
T ss_dssp EEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE
T ss_pred CEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE
Confidence 677766666543 57899999999999888889998885 6543 34555553 2 78999999988899999999999
Q ss_pred EEecccCCCCCcHHHHHHHHcCCeEEec-CCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 044542 361 FVNPTLRPQGLDLTLIEAMHCGRTVLTP-NYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEH 439 (465)
Q Consensus 361 ~v~ps~~~eg~~~~~~EAma~G~PvI~s-~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~ 439 (465)
+|.+| | |+ ..|||++|+|+|++ +.++.. +++.++ .++++..|++++++++.+++++ ++.+++|++++..
T Consensus 311 vv~~S----G-g~-~~EA~a~G~PvV~~~~~~~~~-e~v~~G-~~~lv~~d~~~l~~ai~~ll~d-~~~~~~m~~~~~~- 380 (396)
T 3dzc_A 311 ILTDS----G-GI-QEEAPSLGKPVLVMRETTERP-EAVAAG-TVKLVGTNQQQICDALSLLLTD-PQAYQAMSQAHNP- 380 (396)
T ss_dssp EEESC----S-GG-GTTGGGGTCCEEECCSSCSCH-HHHHHT-SEEECTTCHHHHHHHHHHHHHC-HHHHHHHHTSCCT-
T ss_pred EEECC----c-cH-HHHHHHcCCCEEEccCCCcch-HHHHcC-ceEEcCCCHHHHHHHHHHHHcC-HHHHHHHhhccCC-
Confidence 99887 2 33 48999999999998 677766 676666 5777766899999999999999 8888888876543
Q ss_pred HHhhCCHHHHHHHHHHHH
Q 044542 440 ALSMFTATKMASAYERFF 457 (465)
Q Consensus 440 ~~~~fs~~~~~~~~~~~~ 457 (465)
|.....++++.+++
T Consensus 381 ----~~~~~aa~ri~~~l 394 (396)
T 3dzc_A 381 ----YGDGKACQRIADIL 394 (396)
T ss_dssp ----TCCSCHHHHHHHHH
T ss_pred ----CcCChHHHHHHHHH
Confidence 33344444444443
No 31
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.91 E-value=1.7e-23 Score=202.80 Aligned_cols=336 Identities=14% Similarity=0.083 Sum_probs=214.1
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC--CcEEEEEeCCCCCCCCCc-ccCC--cceEEEeecCC--Ccc-
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR--GHEIHVFTAPSDRKPHND-VHQG--NLHVHFAANDH--GSV- 148 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~-~~~~--~~~v~~~~~~~--~~~- 148 (465)
|++|||++|+..- .+.. .+..++++|.+. |+++.++.+........+ +... .+.....-... ...
T Consensus 25 m~~~kI~~v~Gtr------~~~~-~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~~i~~~~~l~v~~~~~~~~~ 97 (403)
T 3ot5_A 25 MAKIKVMSIFGTR------PEAI-KMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFDIKPDIDLDIMKKGQTLAE 97 (403)
T ss_dssp -CCEEEEEEECSH------HHHH-HHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTTCCCSEECCCCC-CCCHHH
T ss_pred cccceEEEEEecC------hhHH-HHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhcCCCCCcccccCCCCCCHHH
Confidence 5568999999753 2333 357899999987 689887766543211111 1101 11111111000 000
Q ss_pred ----------ccCCCCCCcEEEecCCc---hh---HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhh
Q 044542 149 ----------NLNNDGAFDYVHTESVS---LP---HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTEL 212 (465)
Q Consensus 149 ----------~~~~~~~~DiI~~~~~~---~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (465)
...++.+||+|++++.. ++ .....++| ++....+.... . . +....
T Consensus 98 ~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IP-v~h~~aglrs~--------------~-~---~~~~p 158 (403)
T 3ot5_A 98 ITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKM-LGHVEAGLRTW--------------N-K---YSPFP 158 (403)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCE-EEEESCCCCCS--------------C-T---TSSTT
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCC-EEEEECCcccc--------------c-c---ccCCc
Confidence 11167899999998642 21 22234667 55433331000 0 0 00000
Q ss_pred hhhhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCC-CCCCCccCCcccCcccccccCCCCCCcEEEE
Q 044542 213 QEAMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNG-VDETKFVHDPEAGVRFPEKLGVPANVSLVMG 291 (465)
Q Consensus 213 ~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ng-vd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~ 291 (465)
.....+ ..-+.+|.+++.++..++.+.+ .|++++++.+++|+ +|...+..........++++ .+++++++
T Consensus 159 ~~~~r~-----~~~~~a~~~~~~se~~~~~l~~-~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l---~~~~~vlv 229 (403)
T 3ot5_A 159 EEMNRQ-----LTGVMADIHFSPTKQAKENLLA-EGKDPATIFVTGNTAIDALKTTVQKDYHHPILENL---GDNRLILM 229 (403)
T ss_dssp HHHHHH-----HHHHHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSC---TTCEEEEE
T ss_pred HHHHHH-----HHHHhcCEEECCCHHHHHHHHH-cCCCcccEEEeCCchHHHHHhhhhhhcchHHHHhc---cCCCEEEE
Confidence 111111 1224578999999999999988 69998999999985 45433322221122344444 34457777
Q ss_pred Eeecccc-ccCHHHHHHHHHHhhhcCCCeEEEEE-eCCc-chhHHHH-hc--CCeEEcCCCChhHHHHHHHhcCeEEecc
Q 044542 292 VAGRLVR-DKGHPLLYEAFSSITRDHPGVYLLVA-GTGP-WGRRYAE-LG--QNVKVLGALEAHQLSEFYNALDVFVNPT 365 (465)
Q Consensus 292 ~~Grl~~-~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~-~~~~~~~-l~--~~V~~~g~v~~~~~~~~~~~aDv~v~ps 365 (465)
+.||... .|+++.+++|+..+.+++|++++++. |.++ .++.+++ +. ++|.++|++++.++..+|+.||++|.+|
T Consensus 230 ~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S 309 (403)
T 3ot5_A 230 TAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS 309 (403)
T ss_dssp CCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECC
T ss_pred EeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC
Confidence 7777644 47889999999999888899998887 5443 3445554 33 7899999999899999999999999876
Q ss_pred cCCCCCcHHHHHHHHcCCeEEec-CCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhC
Q 044542 366 LRPQGLDLTLIEAMHCGRTVLTP-NYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALSMF 444 (465)
Q Consensus 366 ~~~eg~~~~~~EAma~G~PvI~s-~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~f 444 (465)
|...+||+++|+|+|++ +.++.. +.+..+ +|+++..|++++++++.+++++ ++.+++|++++..+.. ..
T Consensus 310 ------Gg~~~EA~a~g~PvV~~~~~~~~~-e~v~~g-~~~lv~~d~~~l~~ai~~ll~~-~~~~~~m~~~~~~~g~-~~ 379 (403)
T 3ot5_A 310 ------GGVQEEAPGMGVPVLVLRDTTERP-EGIEAG-TLKLIGTNKENLIKEALDLLDN-KESHDKMAQAANPYGD-GF 379 (403)
T ss_dssp ------HHHHHHGGGTTCCEEECCSSCSCH-HHHHHT-SEEECCSCHHHHHHHHHHHHHC-HHHHHHHHHSCCTTCC-SC
T ss_pred ------ccHHHHHHHhCCCEEEecCCCcch-hheeCC-cEEEcCCCHHHHHHHHHHHHcC-HHHHHHHHhhcCcccC-Cc
Confidence 23448999999999998 667765 666444 8888877999999999999998 8888888876655433 24
Q ss_pred CHHHHHHHHHHHH
Q 044542 445 TATKMASAYERFF 457 (465)
Q Consensus 445 s~~~~~~~~~~~~ 457 (465)
+.+++++.+.+.+
T Consensus 380 aa~rI~~~l~~~l 392 (403)
T 3ot5_A 380 AANRILAAIKSHF 392 (403)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 6666666666554
No 32
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.89 E-value=9e-23 Score=199.55 Aligned_cols=330 Identities=14% Similarity=0.022 Sum_probs=213.4
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeec------------
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAAN------------ 143 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~------------ 143 (465)
+..+|||++++.. .+|....+..++++|.++||+|++++.... .......+..+.....
T Consensus 17 ~~~~MrIl~~~~~------~~Gh~~~~~~la~~L~~~GheV~v~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 87 (412)
T 3otg_A 17 EGRHMRVLFASLG------THGHTYPLLPLATAARAAGHEVTFATGEGF---AGTLRKLGFEPVATGMPVFDGFLAALRI 87 (412)
T ss_dssp -CCSCEEEEECCS------SHHHHGGGHHHHHHHHHTTCEEEEEECGGG---HHHHHHTTCEEEECCCCHHHHHHHHHHH
T ss_pred ccceeEEEEEcCC------CcccHHHHHHHHHHHHHCCCEEEEEccHHH---HHHHHhcCCceeecCcccccchhhhhhh
Confidence 4557999999843 367777788999999999999999997631 1112222222322221
Q ss_pred ---------------CC-------C---------ccccCCCCCCcEEEecCCchhHH---hhhcCCcEEEEecchhHHHH
Q 044542 144 ---------------DH-------G---------SVNLNNDGAFDYVHTESVSLPHW---RAKMVPNVAVTWHGIWYEVM 189 (465)
Q Consensus 144 ---------------~~-------~---------~~~~~~~~~~DiI~~~~~~~~~~---~~~~~p~~v~~~h~~~~~~~ 189 (465)
.. . .....++.+||+|+++...+... ...++| ++.+.|+.....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP-~v~~~~~~~~~~- 165 (412)
T 3otg_A 88 RFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIP-TICHGVGRDTPD- 165 (412)
T ss_dssp HHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCC-EEEECCSCCCCS-
T ss_pred hhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCC-EEEecccccCch-
Confidence 00 0 00011566899999986543322 234678 888888743110
Q ss_pred hhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHH-------HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCC
Q 044542 190 HSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEI-------RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVD 262 (465)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd 262 (465)
.....+...+.+..... ..+..+|.+++.++...+...+.... ....+.+.+.+
T Consensus 166 -----------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 226 (412)
T 3otg_A 166 -----------------DLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARP--RRHELRPVPFA 226 (412)
T ss_dssp -----------------HHHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCT--TEEECCCCCCC
T ss_pred -----------------hhhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCC--CcceeeccCCC
Confidence 00011111222221110 01246788888887776666543322 11111111111
Q ss_pred CCCccCCcccCccccccc--CCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeC-CcchhHHHHhcCC
Q 044542 263 ETKFVHDPEAGVRFPEKL--GVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGT-GPWGRRYAELGQN 339 (465)
Q Consensus 263 ~~~~~~~~~~~~~~r~~~--g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~-g~~~~~~~~l~~~ 339 (465)
. ...+..+ ..+.++++++++.|++. .++.+.+.++++.+.+. +.++++++. +...+.++++.++
T Consensus 227 -----~-----~~~~~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~~~~~l~~~~~~ 293 (412)
T 3otg_A 227 -----E-----QGDLPAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL--DADVLVASGPSLDVSGLGEVPAN 293 (412)
T ss_dssp -----C-----CCCCCGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHTS--SSEEEEECCSSCCCTTCCCCCTT
T ss_pred -----C-----CCCCCCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC--CCEEEEEECCCCChhhhccCCCc
Confidence 0 0111222 22345568888899986 77787777777777653 456666554 4335555566689
Q ss_pred eEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHH
Q 044542 340 VKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVK 412 (465)
Q Consensus 340 V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~ 412 (465)
|.+.|++ ++.++|+.||++|.++ .+.+++|||++|+|+|+.+.++ .. +.+.+.+.|+++++ |++
T Consensus 294 v~~~~~~---~~~~~l~~ad~~v~~~-----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~-~~v~~~g~g~~~~~~~~~~~ 364 (412)
T 3otg_A 294 VRLESWV---PQAALLPHVDLVVHHG-----GSGTTLGALGAGVPQLSFPWAGDSFANA-QAVAQAGAGDHLLPDNISPD 364 (412)
T ss_dssp EEEESCC---CHHHHGGGCSEEEESC-----CHHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHHHTSEEECCGGGCCHH
T ss_pred EEEeCCC---CHHHHHhcCcEEEECC-----chHHHHHHHHhCCCEEecCCchhHHHHH-HHHHHcCCEEecCcccCCHH
Confidence 9999998 4889999999999754 2479999999999999977654 44 56777889999986 899
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 044542 413 SFVEALELVIRDGPKVLQRKGLACKEHALSMFTATKMASAYERFFLR 459 (465)
Q Consensus 413 ~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 459 (465)
+|+++|.++++| ++.++++++.+++.... ++++++++.+++++.+
T Consensus 365 ~l~~ai~~ll~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 365 SVSGAAKRLLAE-ESYRAGARAVAAEIAAM-PGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHHHHHC-HHHHHHHHHHHHHHHHS-CCHHHHHTTHHHHHC-
T ss_pred HHHHHHHHHHhC-HHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHhcc
Confidence 999999999999 89999999999888776 7999999999998754
No 33
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.86 E-value=3.2e-20 Score=177.76 Aligned_cols=316 Identities=16% Similarity=0.150 Sum_probs=197.7
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecC----CCccc-------
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAAND----HGSVN------- 149 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~------- 149 (465)
||++.+. ..||.-.-...++++|.++||+|++++....-. ...+...+..++..+.. ...+.
T Consensus 4 ~i~i~~G------GTgGHi~palala~~L~~~g~~V~~vg~~~g~e-~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 76 (365)
T 3s2u_A 4 NVLIMAG------GTGGHVFPALACAREFQARGYAVHWLGTPRGIE-NDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLE 76 (365)
T ss_dssp EEEEECC------SSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTH-HHHTGGGTCCEEECC--------------CHHH
T ss_pred cEEEEcC------CCHHHHHHHHHHHHHHHhCCCEEEEEECCchHh-hchhhhcCCcEEEEECCCcCCCCHHHHHHHHHH
Confidence 7887653 456766668899999999999999998654211 00111122222222211 01111
Q ss_pred ----------cCCCCCCcEEEecCCc--hhH---HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhh
Q 044542 150 ----------LNNDGAFDYVHTESVS--LPH---WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQE 214 (465)
Q Consensus 150 ----------~~~~~~~DiI~~~~~~--~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (465)
..++.+||+|+.+... .+. ....++| ++..-.+.. .+
T Consensus 77 ~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP-~vihe~n~~---------------------------~G 128 (365)
T 3s2u_A 77 LLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVP-LVIHEQNAV---------------------------AG 128 (365)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCC-EEEEECSSS---------------------------CC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCC-EEEEecchh---------------------------hh
Confidence 1167899999988542 222 2234677 554322210 01
Q ss_pred hhHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEee
Q 044542 215 AMPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAG 294 (465)
Q Consensus 215 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~G 294 (465)
...+ .+.+.++.+....+.. + ....++.++.|++..+.+... +.+.+++.+.+.++++.|
T Consensus 129 ~~nr-----~l~~~a~~v~~~~~~~-------~-~~~~k~~~~g~pvr~~~~~~~-------~~~~~~~~~~~~ilv~gG 188 (365)
T 3s2u_A 129 TANR-----SLAPIARRVCEAFPDT-------F-PASDKRLTTGNPVRGELFLDA-------HARAPLTGRRVNLLVLGG 188 (365)
T ss_dssp HHHH-----HHGGGCSEEEESSTTS-------S-CC---CEECCCCCCGGGCCCT-------TSSCCCTTSCCEEEECCT
T ss_pred hHHH-----hhccccceeeeccccc-------c-cCcCcEEEECCCCchhhccch-------hhhcccCCCCcEEEEECC
Confidence 1111 2235567766554432 1 234677888888876554322 233445556656777778
Q ss_pred ccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcch---hHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCC
Q 044542 295 RLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG---RRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGL 371 (465)
Q Consensus 295 rl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~---~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~ 371 (465)
+....+..+.+.++++.+..+.....++++|.+..+ +.++++..++.+.|++ +++.++|+.||++|. + .|
T Consensus 189 s~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~--~dm~~~l~~aDlvI~---r-aG- 261 (365)
T 3s2u_A 189 SLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFI--SDMAAAYAWADLVIC---R-AG- 261 (365)
T ss_dssp TTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTTHHHHHHHHHHTTCCCEEESCC--SCHHHHHHHCSEEEE---C-CC-
T ss_pred cCCccccchhhHHHHHhcccccceEEEEecCccccccccceecccccccccccch--hhhhhhhccceEEEe---c-CC-
Confidence 888888788888999888655332334556665433 2344455789999999 689999999999995 2 23
Q ss_pred cHHHHHHHHcCCeEEecCCCCcce-------eeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 044542 372 DLTLIEAMHCGRTVLTPNYPSIVR-------TVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLACKEHAL 441 (465)
Q Consensus 372 ~~~~~EAma~G~PvI~s~~gg~~~-------e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 441 (465)
++++.|+|++|+|+|..+.+...+ +.+.+.+.|++++. +++.|+++|.++++| ++.+++|++++++...
T Consensus 262 ~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d-~~~~~~m~~~a~~~~~ 340 (365)
T 3s2u_A 262 ALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMH-PETLRSMADQARSLAK 340 (365)
T ss_dssp HHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHC-THHHHHHHHHHHHTCC
T ss_pred cchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCC-HHHHHHHHHHHHhcCC
Confidence 689999999999999887654321 23556667888875 689999999999999 8999999999998776
Q ss_pred hhCCHHHHHHHHHHHHHHh
Q 044542 442 SMFTATKMASAYERFFLRM 460 (465)
Q Consensus 442 ~~fs~~~~~~~~~~~~~~~ 460 (465)
. ...+++++.++++.+.+
T Consensus 341 ~-~aa~~ia~~i~~larG~ 358 (365)
T 3s2u_A 341 P-EATRTVVDACLEVARGL 358 (365)
T ss_dssp T-THHHHHHHHHHHHC---
T ss_pred c-cHHHHHHHHHHHHHccc
Confidence 5 47777777777766543
No 34
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.85 E-value=5.3e-20 Score=180.87 Aligned_cols=341 Identities=16% Similarity=0.122 Sum_probs=200.5
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecC-C-C---------
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAAND-H-G--------- 146 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~-~-~--------- 146 (465)
.+|||++++. ..+|....+..++++|.++||+|++++...... .....+..+...... . .
T Consensus 6 ~m~kIl~~~~------~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 76 (430)
T 2iyf_A 6 TPAHIAMFSI------AAHGHVNPSLEVIRELVARGHRVTYAIPPVFAD---KVAATGPRPVLYHSTLPGPDADPEAWGS 76 (430)
T ss_dssp --CEEEEECC------SCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHH---HHHTTSCEEEECCCCSCCTTSCGGGGCS
T ss_pred ccceEEEEeC------CCCccccchHHHHHHHHHCCCeEEEEeCHHHHH---HHHhCCCEEEEcCCcCccccccccccch
Confidence 3579999753 236777778999999999999999999765311 111111112111110 0 0
Q ss_pred c--------c-----------ccCCCCCCcEEEecCCchhH---HhhhcCCcEEEEecchh-----HHHHhhhhhhhhhh
Q 044542 147 S--------V-----------NLNNDGAFDYVHTESVSLPH---WRAKMVPNVAVTWHGIW-----YEVMHSKLFGELFS 199 (465)
Q Consensus 147 ~--------~-----------~~~~~~~~DiI~~~~~~~~~---~~~~~~p~~v~~~h~~~-----~~~~~~~~~~~~~~ 199 (465)
. . ...++.+||+|+++...... ....++| .+...++.. ........+.....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP-~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (430)
T 2iyf_A 77 TLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVP-AVSLSPNLVAWKGYEEEVAEPMWREPRQ 155 (430)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCC-EEEEESSCCCCTTHHHHTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCC-EEEEecccccccccccccccchhhhhcc
Confidence 0 0 00067899999997653322 2234678 777765432 00000000000000
Q ss_pred cCCCCCCCchhhhhhhhHHHHHH-------HHhhcccCEEEEeChhHHHHHHHHhCCCCCC-EEEecCCCCCCCccCCcc
Q 044542 200 NQNGVLPGSMTELQEAMPRLVDE-------IRFFSSYNQHICISNSAAEVLVKIYQLPQRN-VHVILNGVDETKFVHDPE 271 (465)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~k-i~vi~ngvd~~~~~~~~~ 271 (465)
. .. ...+...+.+.... ..++..++.+++.+....+.... .++ .+ +..+.++++....
T Consensus 156 ~-----~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~-~~~v~~vG~~~~~~~~----- 221 (430)
T 2iyf_A 156 T-----ER-GRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHAD--RVD-EDVYTFVGACQGDRAE----- 221 (430)
T ss_dssp S-----HH-HHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGG--GSC-TTTEEECCCCC----------
T ss_pred c-----hH-HHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcc--cCC-CccEEEeCCcCCCCCC-----
Confidence 0 00 00111111121110 01233568888887665433322 122 34 7777765542110
Q ss_pred cCcccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEE-EEEeCCcchhHHHHhcCCeEEcCCCChhH
Q 044542 272 AGVRFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYL-LVAGTGPWGRRYAELGQNVKVLGALEAHQ 350 (465)
Q Consensus 272 ~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l-~ivG~g~~~~~~~~l~~~V~~~g~v~~~~ 350 (465)
...+... .++++.+++++|++. .++.+.+.+++..+.+. +++++ +++|++...+.++++.++|.+.|++++.
T Consensus 222 -~~~~~~~---~~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~-~~~~~~~~~G~~~~~~~l~~~~~~v~~~~~~~~~- 294 (430)
T 2iyf_A 222 -EGGWQRP---AGAEKVVLVSLGSAF-TKQPAFYRECVRAFGNL-PGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQL- 294 (430)
T ss_dssp -CCCCCCC---TTCSEEEEEECTTTC-C-CHHHHHHHHHHHTTC-TTEEEEEECC---CGGGGCSCCTTEEEESSCCHH-
T ss_pred -CCCCccc---cCCCCeEEEEcCCCC-CCcHHHHHHHHHHHhcC-CCeEEEEEeCCCCChHHhccCCCCeEEEecCCHH-
Confidence 0011110 224457888999987 55555555555555432 46777 5788876655555566899999999754
Q ss_pred HHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHh
Q 044542 351 LSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIR 423 (465)
Q Consensus 351 ~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~ 423 (465)
++|+.||++|..+ | .++++|||++|+|+|+.+.++ .. +.+.+.+.|+.++. |+++++++|.++++
T Consensus 295 --~~l~~ad~~v~~~----G-~~t~~Ea~~~G~P~i~~p~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~ 366 (430)
T 2iyf_A 295 --AILRQADLFVTHA----G-AGGSQEGLATATPMIAVPQAVDQFGNA-DMLQGLGVARKLATEEATADLLRETALALVD 366 (430)
T ss_dssp --HHHTTCSEEEECC----C-HHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHTTSEEECCCC-CCHHHHHHHHHHHHH
T ss_pred --HHhhccCEEEECC----C-ccHHHHHHHhCCCEEECCCccchHHHH-HHHHHcCCEEEcCCCCCCHHHHHHHHHHHHc
Confidence 7899999998743 2 379999999999999998764 23 45667778999874 78999999999999
Q ss_pred CChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 044542 424 DGPKVLQRKGLACKEHALSMFTATKMASAYERFFLR 459 (465)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 459 (465)
+ ++.++++++.+++.... ++++++++.+++++++
T Consensus 367 ~-~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~ 400 (430)
T 2iyf_A 367 D-PEVARRLRRIQAEMAQE-GGTRRAADLIEAELPA 400 (430)
T ss_dssp C-HHHHHHHHHHHHHHHHH-CHHHHHHHHHHTTSCC
T ss_pred C-HHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHhhc
Confidence 8 88889999888887765 6999998888877654
No 35
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.83 E-value=3.4e-20 Score=180.32 Aligned_cols=155 Identities=17% Similarity=0.120 Sum_probs=106.8
Q ss_pred CCcEEEEEeecccccc----------CHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHH
Q 044542 285 NVSLVMGVAGRLVRDK----------GHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEF 354 (465)
Q Consensus 285 ~~~~~l~~~Grl~~~K----------g~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~ 354 (465)
+.+.+++++|++...| .++.+++++..+ +++++++|.+...+.++++.++|.+.|+++ +.++
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~---~~~l 297 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-----GFEVVVAVSDKLAQTLQPLPEGVLAAGQFP---LSAI 297 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGGG-----TCEEEECCCC--------CCTTEEEESCCC---HHHH
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-----CCEEEEEeCCcchhhhccCCCcEEEeCcCC---HHHH
Confidence 4457887889997554 345555555443 578888887766666667779999999984 6788
Q ss_pred HHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCC----CcceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChH
Q 044542 355 YNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYP----SIVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPK 427 (465)
Q Consensus 355 ~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~g----g~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~ 427 (465)
+..||++|.. |.+.+++|||++|+|+|+...+ +.. +.+.+.+.|++++. |+++|+++|.+++++ ++
T Consensus 298 l~~ad~~v~~-----gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~-~~ 370 (398)
T 4fzr_A 298 MPACDVVVHH-----GGHGTTLTCLSEGVPQVSVPVIAEVWDSA-RLLHAAGAGVEVPWEQAGVESVLAACARIRDD-SS 370 (398)
T ss_dssp GGGCSEEEEC-----CCHHHHHHHHHTTCCEEECCCSGGGHHHH-HHHHHTTSEEECC-------CHHHHHHHHHHC-TH
T ss_pred HhhCCEEEec-----CCHHHHHHHHHhCCCEEecCCchhHHHHH-HHHHHcCCEEecCcccCCHHHHHHHHHHHHhC-HH
Confidence 9999999952 3467999999999999996554 444 56777889999875 689999999999999 88
Q ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHH
Q 044542 428 VLQRKGLACKEHALSMFTATKMASAYER 455 (465)
Q Consensus 428 ~~~~~~~~~~~~~~~~fs~~~~~~~~~~ 455 (465)
.++++++.+++.... .+++.+++.+++
T Consensus 371 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~ 397 (398)
T 4fzr_A 371 YVGNARRLAAEMATL-PTPADIVRLIEQ 397 (398)
T ss_dssp HHHHHHHHHHHHTTS-CCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcC-CCHHHHHHHHhc
Confidence 999998888887655 799998887653
No 36
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.83 E-value=5.9e-20 Score=178.24 Aligned_cols=163 Identities=15% Similarity=0.149 Sum_probs=126.6
Q ss_pred CCCcEEEEEeeccccccCH-HHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEE
Q 044542 284 ANVSLVMGVAGRLVRDKGH-PLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFV 362 (465)
Q Consensus 284 ~~~~~~l~~~Grl~~~Kg~-~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v 362 (465)
.+++.++++.|+....|+. ..+++++.+. ++.|+++++++|.+...+.++.+.++|++.|+++..+ ++..||++|
T Consensus 216 ~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~---ll~~ad~~v 291 (391)
T 3tsa_A 216 TSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRALLTDLPDNARIAESVPLNL---FLRTCELVI 291 (391)
T ss_dssp CSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGGCTTCCTTEEECCSCCGGG---TGGGCSEEE
T ss_pred CCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchhhcccCCCCEEEeccCCHHH---HHhhCCEEE
Confidence 3455778788998775544 6777777777 6667999999988766555556668999999997554 559999999
Q ss_pred ecccCCCCCcHHHHHHHHcCCeEEecCCC----CcceeeeeeCCceEEeCC-----CHHHHHHHHHHHHhCChHHHHHHH
Q 044542 363 NPTLRPQGLDLTLIEAMHCGRTVLTPNYP----SIVRTVVVNEELGYTFSP-----NVKSFVEALELVIRDGPKVLQRKG 433 (465)
Q Consensus 363 ~ps~~~eg~~~~~~EAma~G~PvI~s~~g----g~~~e~v~~~~~G~l~~~-----d~~~la~~i~~ll~~~~~~~~~~~ 433 (465)
.. |.+.+++|||++|+|+|+.... +.. +.+.+.+.|.++++ |++++++++.++++| ++.+++++
T Consensus 292 ~~-----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~-~~~~~~~~ 364 (391)
T 3tsa_A 292 CA-----GGSGTAFTATRLGIPQLVLPQYFDQFDYA-RNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGD-TGFAAAAI 364 (391)
T ss_dssp EC-----CCHHHHHHHHHTTCCEEECCCSTTHHHHH-HHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTC-THHHHHHH
T ss_pred eC-----CCHHHHHHHHHhCCCEEecCCcccHHHHH-HHHHHcCCEEecCcccccCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence 63 3457899999999999996543 233 45677788999874 799999999999999 88899998
Q ss_pred HHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542 434 LACKEHALSMFTATKMASAYERFFL 458 (465)
Q Consensus 434 ~~~~~~~~~~fs~~~~~~~~~~~~~ 458 (465)
+.+++.... .+++.+++.++++..
T Consensus 365 ~~~~~~~~~-~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 365 KLSDEITAM-PHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHHHTS-CCHHHHHHHHHHC--
T ss_pred HHHHHHHcC-CCHHHHHHHHHHHHh
Confidence 888777655 799999988877654
No 37
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.78 E-value=1.4e-17 Score=161.90 Aligned_cols=345 Identities=14% Similarity=0.125 Sum_probs=194.8
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC-------------
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH------------- 145 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~------------- 145 (465)
+|||++++.. ..|.-..+..|+++|+++||+|++++...... .....+..+.......
T Consensus 4 M~~il~~~~~------~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~---~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 74 (402)
T 3ia7_A 4 QRHILFANVQ------GHGHVYPSLGLVSELARRGHRITYVTTPLFAD---EVKAAGAEVVLYKSEFDTFHVPEVVKQED 74 (402)
T ss_dssp CCEEEEECCS------SHHHHHHHHHHHHHHHHTTCEEEEEECHHHHH---HHHHTTCEEEECCCGGGTSSSSSSSCCTT
T ss_pred CCEEEEEeCC------CCcccccHHHHHHHHHhCCCEEEEEcCHHHHH---HHHHcCCEEEecccccccccccccccccc
Confidence 4599998752 35677788899999999999999999642110 1111222222221100
Q ss_pred ------------------CccccCCCCCCcEEEec-CCchhH---HhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCC
Q 044542 146 ------------------GSVNLNNDGAFDYVHTE-SVSLPH---WRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNG 203 (465)
Q Consensus 146 ------------------~~~~~~~~~~~DiI~~~-~~~~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~ 203 (465)
......++.+||+||++ ...... ....++| ++...++.......... .........
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP-~v~~~~~~~~~~~~~~~-~~~~~~~~~ 152 (402)
T 3ia7_A 75 AETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRP-AVRLTGGFAANEHYSLF-KELWKSNGQ 152 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCC-EEEEESSCCCBTTBCHH-HHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCC-EEEEecccccCcccccc-ccccccccc
Confidence 00001167899999998 333222 2335788 77777664321000000 000000000
Q ss_pred CCCCchhhhhhhhHHHHHH-------HHhhccc-CEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcc
Q 044542 204 VLPGSMTELQEAMPRLVDE-------IRFFSSY-NQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVR 275 (465)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~-d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~ 275 (465)
..+.....+...+.+.... ..+.... +..++......+.....+ ..++..+.+.++.... ...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~vGp~~~~~~~------~~~ 223 (402)
T 3ia7_A 153 RHPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETF---DERFAFVGPTLTGRDG------QPG 223 (402)
T ss_dssp CCGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGC---CTTEEECCCCCCC----------CC
T ss_pred cChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccccC---CCCeEEeCCCCCCccc------CCC
Confidence 0000001111111111110 0111222 555555544333322211 2445555443321100 001
Q ss_pred cccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEE-EeCCcchhHHHHhcCCeEEcCCCChhHHHHH
Q 044542 276 FPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLV-AGTGPWGRRYAELGQNVKVLGALEAHQLSEF 354 (465)
Q Consensus 276 ~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~i-vG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~ 354 (465)
... ...+++.++++.|+....+ .+.+.++++.+.+. + +++++ +|++...+.++++.++|.+.|++++. ++
T Consensus 224 ~~~---~~~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~~~-~-~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~---~l 294 (402)
T 3ia7_A 224 WQP---PRPDAPVLLVSLGNQFNEH-PEFFRACAQAFADT-P-WHVVMAIGGFLDPAVLGPLPPNVEAHQWIPFH---SV 294 (402)
T ss_dssp CCC---SSTTCCEEEEECCSCSSCC-HHHHHHHHHHHTTS-S-CEEEEECCTTSCGGGGCSCCTTEEEESCCCHH---HH
T ss_pred Ccc---cCCCCCEEEEECCCCCcch-HHHHHHHHHHHhcC-C-cEEEEEeCCcCChhhhCCCCCcEEEecCCCHH---HH
Confidence 110 1234457888899886554 22333333333322 3 55444 67665555666666899999999644 89
Q ss_pred HHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCC-----CCcceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCCh
Q 044542 355 YNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNY-----PSIVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGP 426 (465)
Q Consensus 355 ~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~-----gg~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~ 426 (465)
++.||++|..+ | ..+++|||++|+|+|+... .+.. +.+.+.+.|..+.. +++++++++.++++| +
T Consensus 295 l~~ad~~v~~~----G-~~t~~Ea~~~G~P~v~~p~~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~-~ 367 (402)
T 3ia7_A 295 LAHARACLTHG----T-TGAVLEAFAAGVPLVLVPHFATEAAPSA-ERVIELGLGSVLRPDQLEPASIREAVERLAAD-S 367 (402)
T ss_dssp HTTEEEEEECC----C-HHHHHHHHHTTCCEEECGGGCGGGHHHH-HHHHHTTSEEECCGGGCSHHHHHHHHHHHHHC-H
T ss_pred HhhCCEEEECC----C-HHHHHHHHHhCCCEEEeCCCcccHHHHH-HHHHHcCCEEEccCCCCCHHHHHHHHHHHHcC-H
Confidence 99999999743 2 3688999999999996654 2343 55677788999875 799999999999999 8
Q ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 044542 427 KVLQRKGLACKEHALSMFTATKMASAYERFFLRM 460 (465)
Q Consensus 427 ~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~ 460 (465)
+.++++++.+++.... .+++..++.+++++.+.
T Consensus 368 ~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~ 400 (402)
T 3ia7_A 368 AVRERVRRMQRDILSS-GGPARAADEVEAYLGRV 400 (402)
T ss_dssp HHHHHHHHHHHHHHTS-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhC-ChHHHHHHHHHHHHhhc
Confidence 8888888877776554 79999999999888653
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.77 E-value=3e-19 Score=171.36 Aligned_cols=334 Identities=10% Similarity=0.039 Sum_probs=209.4
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCC-CCCcc-----cCCcceEEEeecCCCcc---
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRK-PHNDV-----HQGNLHVHFAANDHGSV--- 148 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~-~~~~~-----~~~~~~v~~~~~~~~~~--- 148 (465)
.++|+++|+..=| --.-+.-+.++|.+. +++.++....... ...++ ....+.+..-.......
T Consensus 8 ~~~~~~~v~GtRp-------e~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 79 (385)
T 4hwg_A 8 HMLKVMTIVGTRP-------ELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFDDMGIRKPDYFLEVAADNTAKSI 79 (385)
T ss_dssp CCCEEEEEECSHH-------HHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC-CCCCCCSEECCCCCCCSHHHH
T ss_pred hhhheeEEEEcCH-------hHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHhhCCCCCCceecCCCCCCHHHHH
Confidence 3569999986432 123466778888776 8877777664321 11111 11112222111111110
Q ss_pred --------ccCCCCCCcEEEecCC---chh--HHhhhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhh
Q 044542 149 --------NLNNDGAFDYVHTESV---SLP--HWRAKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEA 215 (465)
Q Consensus 149 --------~~~~~~~~DiI~~~~~---~~~--~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (465)
...++.+||+|++++. .+. .....++| ++....|... +...+...
T Consensus 80 ~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IP-v~h~eaglrs---------------------~~~~~pee 137 (385)
T 4hwg_A 80 GLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIP-IFHMEAGNRC---------------------FDQRVPEE 137 (385)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCC-EEEESCCCCC---------------------SCTTSTHH
T ss_pred HHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCC-EEEEeCCCcc---------------------ccccCcHH
Confidence 0116789999999863 222 22335778 6554444210 00001011
Q ss_pred hHHHHHHHHhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCC-CCCCccCCcccCcccccccCCCCCCcEEEEEee
Q 044542 216 MPRLVDEIRFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGV-DETKFVHDPEAGVRFPEKLGVPANVSLVMGVAG 294 (465)
Q Consensus 216 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~G 294 (465)
..+. ..-+.+|.+++.++..++.+.+ .|++++++.++.|++ |...+......+..+++++|++++ +++++..|
T Consensus 138 ~nR~----~~~~~a~~~~~~te~~~~~l~~-~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~~-~~iLvt~h 211 (385)
T 4hwg_A 138 INRK----IIDHISDVNITLTEHARRYLIA-EGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTPK-QYFLISSH 211 (385)
T ss_dssp HHHH----HHHHHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCTT-SEEEEEEC
T ss_pred HHHH----HHHhhhceeecCCHHHHHHHHH-cCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCcC-CEEEEEeC
Confidence 1111 1124578899999999999988 699989999999864 432221112234567888998764 47777777
Q ss_pred ccc---cccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHh------cCCeEEcCCCChhHHHHHHHhcCeEEecc
Q 044542 295 RLV---RDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAEL------GQNVKVLGALEAHQLSEFYNALDVFVNPT 365 (465)
Q Consensus 295 rl~---~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l------~~~V~~~g~v~~~~~~~~~~~aDv~v~ps 365 (465)
|.. ..|+++.+++|+.++.+++ ++.+++......++.++++ .++|.+++.+++.++..+|+.||+++.+|
T Consensus 212 r~e~~~~~~~l~~ll~al~~l~~~~-~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S 290 (385)
T 4hwg_A 212 REENVDVKNNLKELLNSLQMLIKEY-NFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS 290 (385)
T ss_dssp CC-----CHHHHHHHHHHHHHHHHH-CCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC
T ss_pred CchhcCcHHHHHHHHHHHHHHHhcC-CeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC
Confidence 753 3377899999999997755 6777765543344455544 26899999998889999999999999655
Q ss_pred cCCCCCcHHHHHHHHcCCeEEecCCCC-cceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHH-HHhh
Q 044542 366 LRPQGLDLTLIEAMHCGRTVLTPNYPS-IVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEH-ALSM 443 (465)
Q Consensus 366 ~~~eg~~~~~~EAma~G~PvI~s~~gg-~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~-~~~~ 443 (465)
|..+.||+++|+|+|+.+... .+ |.+..| .+.++..|++++++++.+++++ ++.+++|++++..+ ...
T Consensus 291 ------Ggv~~EA~alG~Pvv~~~~~ter~-e~v~~G-~~~lv~~d~~~i~~ai~~ll~d-~~~~~~m~~~~~~~~g~g- 360 (385)
T 4hwg_A 291 ------GTITEEASILNLPALNIREAHERP-EGMDAG-TLIMSGFKAERVLQAVKTITEE-HDNNKRTQGLVPDYNEAG- 360 (385)
T ss_dssp ------TTHHHHHHHTTCCEEECSSSCSCT-HHHHHT-CCEECCSSHHHHHHHHHHHHTT-CBTTBCCSCCCHHHHTCC-
T ss_pred ------ccHHHHHHHcCCCEEEcCCCccch-hhhhcC-ceEEcCCCHHHHHHHHHHHHhC-hHHHHHhhccCCCCCCCC-
Confidence 236799999999999976543 34 555444 6777766999999999999998 66666665545444 333
Q ss_pred CCHHHHHHHHHHHHH
Q 044542 444 FTATKMASAYERFFL 458 (465)
Q Consensus 444 fs~~~~~~~~~~~~~ 458 (465)
.+.+++++.+.+.+.
T Consensus 361 ~aa~rI~~~l~~~~~ 375 (385)
T 4hwg_A 361 LVSKKILRIVLSYVD 375 (385)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhh
Confidence 466667666666553
No 39
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.77 E-value=3.2e-17 Score=159.31 Aligned_cols=158 Identities=13% Similarity=0.044 Sum_probs=117.7
Q ss_pred CCCcEEEEEeeccccc-cCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEE
Q 044542 284 ANVSLVMGVAGRLVRD-KGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFV 362 (465)
Q Consensus 284 ~~~~~~l~~~Grl~~~-Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v 362 (465)
.+++.+++++|++... ++.+.+.++++.+.+. +++++++|++...+.++.+.++|.+.|+++ +.+++..||++|
T Consensus 230 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~---~~~ll~~ad~~v 304 (398)
T 3oti_A 230 PARPEVAITMGTIELQAFGIGAVEPIIAAAGEV--DADFVLALGDLDISPLGTLPRNVRAVGWTP---LHTLLRTCTAVV 304 (398)
T ss_dssp CSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS--SSEEEEECTTSCCGGGCSCCTTEEEESSCC---HHHHHTTCSEEE
T ss_pred CCCCEEEEEcCCCccccCcHHHHHHHHHHHHcC--CCEEEEEECCcChhhhccCCCcEEEEccCC---HHHHHhhCCEEE
Confidence 3455788889999665 4666666666666543 688899887766655666678999999984 667889999999
Q ss_pred ecccCCCCCcHHHHHHHHcCCeEEecCC----CCcce-eeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHH
Q 044542 363 NPTLRPQGLDLTLIEAMHCGRTVLTPNY----PSIVR-TVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGL 434 (465)
Q Consensus 363 ~ps~~~eg~~~~~~EAma~G~PvI~s~~----gg~~~-e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~ 434 (465)
.. |-+.+++|||++|+|+|+... ++... +.+.+.+.|+.++. +++.++ ++++| ++.++++++
T Consensus 305 ~~-----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~-~~~~~~~~~ 374 (398)
T 3oti_A 305 HH-----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIGD-ESLRTAARE 374 (398)
T ss_dssp EC-----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHHC-HHHHHHHHH
T ss_pred EC-----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHcC-HHHHHHHHH
Confidence 63 345699999999999999543 43320 34556778999875 455555 88888 899999988
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHH
Q 044542 435 ACKEHALSMFTATKMASAYERFF 457 (465)
Q Consensus 435 ~~~~~~~~~fs~~~~~~~~~~~~ 457 (465)
.+++.... .+++.+++.++++.
T Consensus 375 ~~~~~~~~-~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 375 VREEMVAL-PTPAETVRRIVERI 396 (398)
T ss_dssp HHHHHHTS-CCHHHHHHHHHHHH
T ss_pred HHHHHHhC-CCHHHHHHHHHHHh
Confidence 88877655 79999999888765
No 40
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.75 E-value=8.6e-17 Score=157.18 Aligned_cols=161 Identities=19% Similarity=0.209 Sum_probs=116.9
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEE-EeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEe
Q 044542 285 NVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLV-AGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVN 363 (465)
Q Consensus 285 ~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~i-vG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ 363 (465)
+.+.++++.|+.....+ +.+..+++.+.+ .+ +++++ +|.+...+.++++.++|.+.|++++. +++..||++|.
T Consensus 246 ~~~~v~v~~Gs~~~~~~-~~~~~~~~al~~-~~-~~~v~~~g~~~~~~~l~~~~~~v~~~~~~~~~---~ll~~ad~~v~ 319 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDRP-GFFRDCARAFDG-QP-WHVVMTLGGQVDPAALGDLPPNVEAHRWVPHV---KVLEQATVCVT 319 (415)
T ss_dssp CCCEEEEECTTTSCCCH-HHHHHHHHHHTT-SS-CEEEEECTTTSCGGGGCCCCTTEEEESCCCHH---HHHHHEEEEEE
T ss_pred CCCEEEEECCCCCCChH-HHHHHHHHHHhc-CC-cEEEEEeCCCCChHHhcCCCCcEEEEecCCHH---HHHhhCCEEEE
Confidence 44578888898754332 222233333322 23 66666 67665556666666899999999744 88999999997
Q ss_pred cccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHH
Q 044542 364 PTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLAC 436 (465)
Q Consensus 364 ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~ 436 (465)
.+ | ..+++|||++|+|+|+....+ .. +.+.+.+.|..+.. +++++++++.+++++ ++.++++.+.+
T Consensus 320 ~~----G-~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~ 392 (415)
T 3rsc_A 320 HG----G-MGTLMEALYWGRPLVVVPQSFDVQPMA-RRVDQLGLGAVLPGEKADGDTLLAAVGAVAAD-PALLARVEAMR 392 (415)
T ss_dssp SC----C-HHHHHHHHHTTCCEEECCCSGGGHHHH-HHHHHHTCEEECCGGGCCHHHHHHHHHHHHTC-HHHHHHHHHHH
T ss_pred CC----c-HHHHHHHHHhCCCEEEeCCcchHHHHH-HHHHHcCCEEEcccCCCCHHHHHHHHHHHHcC-HHHHHHHHHHH
Confidence 43 2 358899999999999965432 33 45566778888875 799999999999999 88888888877
Q ss_pred HHHHHhhCCHHHHHHHHHHHHHH
Q 044542 437 KEHALSMFTATKMASAYERFFLR 459 (465)
Q Consensus 437 ~~~~~~~fs~~~~~~~~~~~~~~ 459 (465)
++.... .+.+..++.+++++.+
T Consensus 393 ~~~~~~-~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 393 GHVRRA-GGAARAADAVEAYLAR 414 (415)
T ss_dssp HHHHHS-CHHHHHHHHHHHHHHH
T ss_pred HHHHhc-CHHHHHHHHHHHHhhc
Confidence 776655 7899999988888764
No 41
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.72 E-value=2.6e-16 Score=152.14 Aligned_cols=157 Identities=14% Similarity=0.094 Sum_probs=119.7
Q ss_pred CCcEEEEEeeccccc-------cCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHh
Q 044542 285 NVSLVMGVAGRLVRD-------KGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNA 357 (465)
Q Consensus 285 ~~~~~l~~~Grl~~~-------Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~ 357 (465)
+++.+++++|++... +.++.+++++..+ ++++++++.++..+.++.+.++|.+ |+++. .++|..
T Consensus 209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~~~l~~~~~~v~~-~~~~~---~~~l~~ 279 (384)
T 2p6p_A 209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVELIVAAPDTVAEALRAEVPQARV-GWTPL---DVVAPT 279 (384)
T ss_dssp SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCEEEEECCHHHHHHHHHHCTTSEE-ECCCH---HHHGGG
T ss_pred CCCEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcEEEEEeCCCCHHhhCCCCCceEE-cCCCH---HHHHhh
Confidence 345778899998765 5667777777654 5778776554444455566789999 99964 567899
Q ss_pred cCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHH
Q 044542 358 LDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQ 430 (465)
Q Consensus 358 aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~ 430 (465)
||++|..+ | +++++|||++|+|+|+.+..+ .. +.+.+.+.|+.++. ++++++++|.+++.+ ++.++
T Consensus 280 ~d~~v~~~----G-~~t~~Ea~~~G~P~v~~p~~~dq~~~a-~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~ 352 (384)
T 2p6p_A 280 CDLLVHHA----G-GVSTLTGLSAGVPQLLIPKGSVLEAPA-RRVADYGAAIALLPGEDSTEAIADSCQELQAK-DTYAR 352 (384)
T ss_dssp CSEEEECS----C-TTHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHHTSEEECCTTCCCHHHHHHHHHHHHHC-HHHHH
T ss_pred CCEEEeCC----c-HHHHHHHHHhCCCEEEccCcccchHHH-HHHHHCCCeEecCcCCCCHHHHHHHHHHHHcC-HHHHH
Confidence 99999843 2 358999999999999998753 33 44566778998874 799999999999998 88888
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542 431 RKGLACKEHALSMFTATKMASAYERFFL 458 (465)
Q Consensus 431 ~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 458 (465)
++++.+++.... -..+..++.+.++..
T Consensus 353 ~~~~~~~~~~~~-~~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 353 RAQDLSREISGM-PLPATVVTALEQLAH 379 (384)
T ss_dssp HHHHHHHHHHTS-CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCHHHHHHHHHHHhh
Confidence 888887777655 488888888777654
No 42
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.65 E-value=6.2e-15 Score=145.06 Aligned_cols=159 Identities=12% Similarity=0.034 Sum_probs=119.2
Q ss_pred CCCcEEEEEeecccc-----ccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhc
Q 044542 284 ANVSLVMGVAGRLVR-----DKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNAL 358 (465)
Q Consensus 284 ~~~~~~l~~~Grl~~-----~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~a 358 (465)
++++.++++.|+... .+.+..+++++..+ ++++++++.+...+.++++.++|.+.|++++ .++|..|
T Consensus 265 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~---~~ll~~a 336 (441)
T 2yjn_A 265 PERRRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQQLEGVANIPDNVRTVGFVPM---HALLPTC 336 (441)
T ss_dssp CSSCEEEEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTTTTSSCSSCCSSEEECCSCCH---HHHGGGC
T ss_pred CCCCEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCcchhhhccCCCCEEEecCCCH---HHHHhhC
Confidence 344578888999875 37888888888765 5678777655544434345589999999975 4568999
Q ss_pred CeEEecccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHH
Q 044542 359 DVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQR 431 (465)
Q Consensus 359 Dv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~ 431 (465)
|++|.. |-+.+++|||++|+|+|+.+..+ .. +.+.+.+.|+.++. ++++++++|.+++++ ++.+++
T Consensus 337 d~~V~~-----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~ 409 (441)
T 2yjn_A 337 AATVHH-----GGPGSWHTAAIHGVPQVILPDGWDTGVRA-QRTQEFGAGIALPVPELTPDQLRESVKRVLDD-PAHRAG 409 (441)
T ss_dssp SEEEEC-----CCHHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHHTSEEECCTTTCCHHHHHHHHHHHHHC-HHHHHH
T ss_pred CEEEEC-----CCHHHHHHHHHhCCCEEEeCCcccHHHHH-HHHHHcCCEEEcccccCCHHHHHHHHHHHhcC-HHHHHH
Confidence 999972 33579999999999999998743 23 45666778998874 789999999999998 888888
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 044542 432 KGLACKEHALSMFTATKMASAYERFFL 458 (465)
Q Consensus 432 ~~~~~~~~~~~~fs~~~~~~~~~~~~~ 458 (465)
+.+.+++.... .+.+.+++.+++++.
T Consensus 410 ~~~~~~~~~~~-~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 410 AARMRDDMLAE-PSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHHHHTS-CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC-CCHHHHHHHHHHHHH
Confidence 88887776654 699999998888765
No 43
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=99.64 E-value=5e-15 Score=146.21 Aligned_cols=325 Identities=12% Similarity=0.056 Sum_probs=199.4
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCC------CccccC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDH------GSVNLN 151 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~~~ 151 (465)
++.+|++++..+ ...-+.+....+..+. +..++|+.+. ... .+... ......++...... ..-..+
T Consensus 274 K~l~ig~ls~f~----~~HsV~r~~~~~l~~d-R~~FEV~~Ys-~~~-~D~~t-r~~~d~f~~l~~~s~~~~~~~ia~~I 345 (631)
T 3q3e_A 274 KPVMVVLLEHFH----SAHSIYRTHSTSMIAA-REHFYLIGLG-SPS-VDQAG-QEVFDEFHLVAGDNMKQKLEFIRSVC 345 (631)
T ss_dssp EEEEEEECSSCC----TTSHHHHHHHHHHHHH-TTTSEEEEEE-CTT-SCHHH-HTTSSEEEECCCSSHHHHHHHHHHHH
T ss_pred CeEEEEEeCccc----CCCcHHHHHHHHHHhh-hhcEEEEEEe-CCC-CCHHH-HhcCcEEEECCCCCccccHHHHHHHH
Confidence 445666666553 2334445555555553 5579999998 332 11111 11222222222211 001122
Q ss_pred CCCCCcEEEecCC---chhHHh--hhcCCcEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHhh
Q 044542 152 NDGAFDYVHTESV---SLPHWR--AKMVPNVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRFF 226 (465)
Q Consensus 152 ~~~~~DiI~~~~~---~~~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (465)
++.++||++--+. .....+ .+--| +-+++-|.+.- .+ +
T Consensus 346 r~d~IDILVdL~g~t~~~~i~~aa~RpAP-VQvs~lGyp~T------------------TG------------------l 388 (631)
T 3q3e_A 346 ESNGAAIFYMPSIGMDMTTIFASNTRLAP-IQAIALGHPAT------------------TH------------------S 388 (631)
T ss_dssp HHHTCSEEEESCCSSSHHHHHHTTSCCSS-EEEEECSSCSC------------------CC------------------C
T ss_pred HhcCCCEEEECCCCCCchhHHHHhCCCch-heEeccCCCcc------------------cC------------------c
Confidence 6778999886432 222222 12336 88888875311 11 2
Q ss_pred cccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCC-CcEEEEEeeccccccCHHHH
Q 044542 227 SSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPAN-VSLVMGVAGRLVRDKGHPLL 305 (465)
Q Consensus 227 ~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~-~~~~l~~~Grl~~~Kg~~~l 305 (465)
...|++++-....- -...| .+++..+|+..- .+.+... ...+..++++.+ +.++++++++ ..|..+.+
T Consensus 389 ~~iDY~i~D~~~~~--~~~~y---sEklirLP~~~~--~~~p~~~--~p~r~~~~lp~~~G~v~Fg~fn~--~~Ki~p~~ 457 (631)
T 3q3e_A 389 DFIEYVIVEDDYVG--SEECF---SETLLRLPKDAL--PYVPSAL--APEKVDYLLRENPEVVNIGIAST--TMKLNPYF 457 (631)
T ss_dssp TTCCEEEEEGGGCC--CGGGC---SSEEEEECTTSS--CCCCCTT--CCSSCCCCCCSCCSEEEEEEEEC--STTCCHHH
T ss_pred ccCCEEEeCCCCCC--cccCc---eeeEEECCCCcc--ccCCccc--CCccccccCCcCCCeEEEEECCc--cccCCHHH
Confidence 34466665332111 12222 488888887421 1222221 123566788874 4578888886 47999999
Q ss_pred HHHHHHhhhcCCCeEEE--EEeCC--cchhHHH---Hh--cCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHH
Q 044542 306 YEAFSSITRDHPGVYLL--VAGTG--PWGRRYA---EL--GQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLI 376 (465)
Q Consensus 306 l~a~~~l~~~~~~~~l~--ivG~g--~~~~~~~---~l--~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~ 376 (465)
++++.++.++.|+..+. ++|.+ ......+ +. .++|.|.|.++.++....|+.+|+++.|+.+ +.|++.+
T Consensus 458 l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy--~GgtTtl 535 (631)
T 3q3e_A 458 LEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPF--GNTNGII 535 (631)
T ss_dssp HHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSS--CCSHHHH
T ss_pred HHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCcc--cCChHHH
Confidence 99999999988887654 36743 3222222 22 2799999999999999999999999999854 5599999
Q ss_pred HHHHcCCeEEecCCCCcceeeee------eCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHh--hCC--H
Q 044542 377 EAMHCGRTVLTPNYPSIVRTVVV------NEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHALS--MFT--A 446 (465)
Q Consensus 377 EAma~G~PvI~s~~gg~~~e~v~------~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~--~fs--~ 446 (465)
|||++|+|||+...++.. ..+. -|-.++++..|.+++++...++..| ++.+++++++.++.... .|+ .
T Consensus 536 EALwmGVPVVTl~G~~~a-sRvgaSlL~~~GLpE~LIA~d~eeYv~~Av~La~D-~~~l~~LR~~Lr~~~~~spLFd~~~ 613 (631)
T 3q3e_A 536 DMVTLGLVGVCKTGAEVH-EHIDEGLFKRLGLPEWLIANTVDEYVERAVRLAEN-HQERLELRRYIIENNGLNTLFTGDP 613 (631)
T ss_dssp HHHHTTCCEEEECCSSHH-HHHHHHHHHHTTCCGGGEESSHHHHHHHHHHHHHC-HHHHHHHHHHHHHSCCHHHHTCSCC
T ss_pred HHHHcCCCEEeccCCcHH-HHhHHHHHHhcCCCcceecCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHhhhCCCcchhH
Confidence 999999999998766555 3221 1333433333899999999999999 99999999988877544 233 3
Q ss_pred HHHHHHHHHHHHHhcC
Q 044542 447 TKMASAYERFFLRMKN 462 (465)
Q Consensus 447 ~~~~~~~~~~~~~~~~ 462 (465)
+.+.+.|.+++++..+
T Consensus 614 ~~~e~~ye~~~~~w~~ 629 (631)
T 3q3e_A 614 RPMGQVFLEKLNAFLK 629 (631)
T ss_dssp THHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 5556666666655443
No 44
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.60 E-value=2.5e-13 Score=132.92 Aligned_cols=161 Identities=16% Similarity=0.099 Sum_probs=114.0
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEE-EEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEe
Q 044542 285 NVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYL-LVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVN 363 (465)
Q Consensus 285 ~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l-~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ 363 (465)
+++.++++.|+.. .+..+.+.+++..+.+ .++++ +++|.+...+.++++.++|.+.+++++. ++|..+|++|.
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~--~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~d~~v~ 327 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDG--LDWHVVLSVGRFVDPADLGEVPPNVEVHQWVPQL---DILTKASAFIT 327 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHTT--CSSEEEEECCTTSCGGGGCSCCTTEEEESSCCHH---HHHTTCSEEEE
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHhc--CCcEEEEEECCcCChHHhccCCCCeEEecCCCHH---HHHhhCCEEEE
Confidence 3457777889886 3444444444444433 35666 5568765444444456899999999754 68999999886
Q ss_pred cccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHH
Q 044542 364 PTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLAC 436 (465)
Q Consensus 364 ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~ 436 (465)
. +-.++++||+++|+|+|+....+ .. +.+.+.+.|+.++. ++++++++|.+++++ ++.++++.+.+
T Consensus 328 ~-----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~ 400 (424)
T 2iya_A 328 H-----AGMGSTMEALSNAVPMVAVPQIAEQTMNA-ERIVELGLGRHIPRDQVTAEKLREAVLAVASD-PGVAERLAAVR 400 (424)
T ss_dssp C-----CCHHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHTTSEEECCGGGCCHHHHHHHHHHHHHC-HHHHHHHHHHH
T ss_pred C-----CchhHHHHHHHcCCCEEEecCccchHHHH-HHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHH
Confidence 3 22479999999999999987643 12 34556678888873 899999999999998 88777777766
Q ss_pred HHHHHhhCCHHHHHHHHHHHHHH
Q 044542 437 KEHALSMFTATKMASAYERFFLR 459 (465)
Q Consensus 437 ~~~~~~~fs~~~~~~~~~~~~~~ 459 (465)
++... ....+..++.+++++.+
T Consensus 401 ~~~~~-~~~~~~~~~~i~~~~~~ 422 (424)
T 2iya_A 401 QEIRE-AGGARAAADILEGILAE 422 (424)
T ss_dssp HHHHT-SCHHHHHHHHHHHHHHH
T ss_pred HHHHh-cCcHHHHHHHHHHHHhc
Confidence 66543 35778888877776643
No 45
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.54 E-value=1.2e-13 Score=133.94 Aligned_cols=160 Identities=16% Similarity=0.101 Sum_probs=104.4
Q ss_pred CCCCcEEEEEeeccccccC-HHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeE
Q 044542 283 PANVSLVMGVAGRLVRDKG-HPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVF 361 (465)
Q Consensus 283 ~~~~~~~l~~~Grl~~~Kg-~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~ 361 (465)
..+++.+++..|++...++ .+.+.+++..+.+ .+..+++.+.+...+....+.++|.+.+++|+. ++|..+|++
T Consensus 234 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~p~~---~lL~~~~~~ 308 (400)
T 4amg_A 234 AAGRRRIAVTLGSIDALSGGIAKLAPLFSEVAD--VDAEFVLTLGGGDLALLGELPANVRVVEWIPLG---ALLETCDAI 308 (400)
T ss_dssp CTTCCEEEECCCSCC--CCSSSTTHHHHHHGGG--SSSEEEEECCTTCCCCCCCCCTTEEEECCCCHH---HHHTTCSEE
T ss_pred cCCCcEEEEeCCcccccCccHHHHHHHHHHhhc--cCceEEEEecCccccccccCCCCEEEEeecCHH---HHhhhhhhe
Confidence 3445577778888765443 3444455555544 356666666544444444566899999999754 567899998
Q ss_pred EecccCCCCCcHHHHHHHHcCCeEEecCCCCc----ceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHH
Q 044542 362 VNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSI----VRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACK 437 (465)
Q Consensus 362 v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~----~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~ 437 (465)
|.. +-.+++.|||++|+|+|+....+- . +.+.+.+.|+.++. .+..+++|.++++| ++.+++..+-++
T Consensus 309 v~h-----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na-~~v~~~G~g~~l~~-~~~~~~al~~lL~d-~~~r~~a~~l~~ 380 (400)
T 4amg_A 309 IHH-----GGSGTLLTALAAGVPQCVIPHGSYQDTNR-DVLTGLGIGFDAEA-GSLGAEQCRRLLDD-AGLREAALRVRQ 380 (400)
T ss_dssp EEC-----CCHHHHHHHHHHTCCEEECCC---CHHHH-HHHHHHTSEEECCT-TTCSHHHHHHHHHC-HHHHHHHHHHHH
T ss_pred ecc-----CCccHHHHHHHhCCCEEEecCcccHHHHH-HHHHHCCCEEEcCC-CCchHHHHHHHHcC-HHHHHHHHHHHH
Confidence 852 335689999999999999766542 2 34455567887774 44567889999999 877766655544
Q ss_pred HHHHhhCCHHHHHHHHHHH
Q 044542 438 EHALSMFTATKMASAYERF 456 (465)
Q Consensus 438 ~~~~~~fs~~~~~~~~~~~ 456 (465)
+. ...-+....++.++++
T Consensus 381 ~~-~~~~~~~~~a~~le~l 398 (400)
T 4amg_A 381 EM-SEMPPPAETAAXLVAL 398 (400)
T ss_dssp HH-HTSCCHHHHHHHHHHH
T ss_pred HH-HcCCCHHHHHHHHHHh
Confidence 44 4445777777776654
No 46
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.42 E-value=4.1e-12 Score=123.87 Aligned_cols=151 Identities=13% Similarity=0.106 Sum_probs=102.9
Q ss_pred cEEEEEeeccc-cccCHHHHHHHHHHhhhcCCCeEEEEE-eCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEec
Q 044542 287 SLVMGVAGRLV-RDKGHPLLYEAFSSITRDHPGVYLLVA-GTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNP 364 (465)
Q Consensus 287 ~~~l~~~Grl~-~~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~p 364 (465)
+.++++.|+.. ..+..+.++++++.+ +.+++++ |.+... ...+.++|.+.|++++.+ ++..||++|..
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~--~~~~~~~v~~~~~~~~~~---~l~~~d~~v~~ 308 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH-----GRRVILSRGWADLV--LPDDGADCFAIGEVNHQV---LFGRVAAVIHH 308 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT-----TCCEEECTTCTTCC--CSSCGGGEEECSSCCHHH---HGGGSSEEEEC
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC-----CCeEEEEeCCCccc--ccCCCCCEEEeCcCChHH---HHhhCCEEEeC
Confidence 46777889984 777788888888776 2345554 765432 123447899999998654 57999999973
Q ss_pred ccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHHH
Q 044542 365 TLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLACK 437 (465)
Q Consensus 365 s~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~~ 437 (465)
+ | .++++|||++|+|+|+.+..+ .. +.+.+.+.|+.++. +.++++++|.++ .+ ++.++++.+.++
T Consensus 309 ~----G-~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~-~~~~~~~~~~~~ 380 (415)
T 1iir_A 309 G----G-AGTTHVAARAGAPQILLPQMADQPYYA-GRVAELGVGVAHDGPIPTFDSLSAALATA-LT-PETHARATAVAG 380 (415)
T ss_dssp C----C-HHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHHHTSEEECSSSSCCHHHHHHHHHHH-TS-HHHHHHHHHHHH
T ss_pred C----C-hhHHHHHHHcCCCEEECCCCCccHHHH-HHHHHCCCcccCCcCCCCHHHHHHHHHHH-cC-HHHHHHHHHHHH
Confidence 2 2 379999999999999987754 22 34566678888863 899999999999 87 777766665554
Q ss_pred HHHHhhCCHHHHHHHHHHH
Q 044542 438 EHALSMFTATKMASAYERF 456 (465)
Q Consensus 438 ~~~~~~fs~~~~~~~~~~~ 456 (465)
+.. ..-..+.+++.++++
T Consensus 381 ~~~-~~~~~~~~~~~i~~~ 398 (415)
T 1iir_A 381 TIR-TDGAAVAARLLLDAV 398 (415)
T ss_dssp HSC-SCHHHHHHHHHHHHH
T ss_pred HHh-hcChHHHHHHHHHHH
Confidence 432 223445554444444
No 47
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.37 E-value=7e-12 Score=121.68 Aligned_cols=156 Identities=15% Similarity=0.095 Sum_probs=106.1
Q ss_pred CCcEEEEEeeccc-cccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEe
Q 044542 285 NVSLVMGVAGRLV-RDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFVN 363 (465)
Q Consensus 285 ~~~~~l~~~Grl~-~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ 363 (465)
+++.+++..|+.. ..+.++.+++++..+ ++++++.+.....+. .++.++|.+.++++. ..++..+|++|.
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~vv~~~g~~~~~~-~~~~~~v~~~~~~~~---~~ll~~~d~~v~ 290 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRRVVLSSGWAGLGR-IDEGDDCLVVGEVNH---QVLFGRVAAVVH 290 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCCEEEECTTTTCCC-SSCCTTEEEESSCCH---HHHGGGSSEEEE
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCEEEEEeCCccccc-ccCCCCEEEecCCCH---HHHHhhCcEEEE
Confidence 3456777889887 566677777777765 456666643322211 123489999999964 457789999997
Q ss_pred cccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHHH
Q 044542 364 PTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLACK 437 (465)
Q Consensus 364 ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~~ 437 (465)
.+ | ..++.||+++|+|+|+....+-.. +.+.+.+.|..++. +++++.+++.++++ ++.++++.+.+.
T Consensus 291 ~g----G-~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~--~~~~~~~~~~~~ 363 (404)
T 3h4t_A 291 HG----G-AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT--PGIRARAAAVAG 363 (404)
T ss_dssp CC----C-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS--HHHHHHHHHHHT
T ss_pred CC----c-HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC--HHHHHHHHHHHH
Confidence 33 2 368999999999999987654310 23455667888764 79999999999986 566666655544
Q ss_pred HHHHhhCCHHHHHHHHHHHHH
Q 044542 438 EHALSMFTATKMASAYERFFL 458 (465)
Q Consensus 438 ~~~~~~fs~~~~~~~~~~~~~ 458 (465)
+... -..+..++.++++++
T Consensus 364 ~~~~--~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 364 TIRT--DGTTVAAKLLLEAIS 382 (404)
T ss_dssp TCCC--CHHHHHHHHHHHHHH
T ss_pred HHhh--hHHHHHHHHHHHHHh
Confidence 4332 366777777766664
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.34 E-value=1e-10 Score=120.94 Aligned_cols=181 Identities=14% Similarity=0.159 Sum_probs=139.1
Q ss_pred ccccccCCCCCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcch-h----HHHHhc---CCeEEcCCC
Q 044542 275 RFPEKLGVPANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG-R----RYAELG---QNVKVLGAL 346 (465)
Q Consensus 275 ~~r~~~g~~~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~-~----~~~~l~---~~V~~~g~v 346 (465)
..|..+|++++. ++++++.++ .|=-+.+++++.++.++.|+-+|++....... + ..++.+ ++|+|.+.+
T Consensus 512 ~~R~~~gLp~~~-v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~ 588 (723)
T 4gyw_A 512 TTRSQYGLPEDA-IVYCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVA 588 (723)
T ss_dssp EEGGGGTCCTTS-EEEECCSCG--GGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred cchhhcCCCCCC-EEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCC
Confidence 457788999887 777666654 57778899999999999999999988765432 2 233333 899999999
Q ss_pred ChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce----eeeeeCCceEEeCCCHHHHHHHHHHHH
Q 044542 347 EAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR----TVVVNEELGYTFSPNVKSFVEALELVI 422 (465)
Q Consensus 347 ~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~----e~v~~~~~G~l~~~d~~~la~~i~~ll 422 (465)
+.++....|+.+|+++-|-.+ +-+++.+||+.+|+|||+-....+.. .++..-+..-++..|.++..+...++.
T Consensus 589 ~~~~~l~~~~~~Di~LDt~p~--~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~~~~~Y~~~a~~la 666 (723)
T 4gyw_A 589 PKEEHVRRGQLADVCLDTPLC--NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKLG 666 (723)
T ss_dssp CHHHHHHHGGGCSEEECCSSS--CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHhCCCeEEeCCCCc--CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccCCHHHHHHHHHHHh
Confidence 999999999999999997644 56899999999999999976444331 111111112233348999999999999
Q ss_pred hCChHHHHHHHHHHHHHHHh--hCCHHHHHHHHHHHHHHhc
Q 044542 423 RDGPKVLQRKGLACKEHALS--MFTATKMASAYERFFLRMK 461 (465)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~--~fs~~~~~~~~~~~~~~~~ 461 (465)
.| ++.+.+++++-++.... -|+.+..++.+++.|+++-
T Consensus 667 ~d-~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w 706 (723)
T 4gyw_A 667 TD-LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMW 706 (723)
T ss_dssp HC-HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHH
T ss_pred cC-HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHH
Confidence 99 89999998888777655 5899999999999998763
No 49
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.32 E-value=2.7e-12 Score=108.61 Aligned_cols=130 Identities=17% Similarity=0.178 Sum_probs=96.2
Q ss_pred CCcEEEEEeeccc---cccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeE
Q 044542 285 NVSLVMGVAGRLV---RDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVF 361 (465)
Q Consensus 285 ~~~~~l~~~Grl~---~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~ 361 (465)
+.+.+++++|++. +.|.+..+++++..+ +.++++++.+...+ .+.++|++.|+++++++..+ ..||++
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~~---~~~~~v~~~~~~~~~~~l~~-~~ad~~ 90 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQI-----PQKVLWRFDGNKPD---TLGLNTRLYKWIPQNDLLGH-PKTRAF 90 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTTS-----SSEEEEECCSSCCT---TCCTTEEEESSCCHHHHHTS-TTEEEE
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHhC-----CCeEEEEECCcCcc---cCCCcEEEecCCCHHHHhcC-CCcCEE
Confidence 3347788899985 567777777777654 35677776554322 34579999999987554433 999999
Q ss_pred EecccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHH
Q 044542 362 VNPTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQ 430 (465)
Q Consensus 362 v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~ 430 (465)
|.. +-+.+++|||++|+|+|+.+..+ .. +.+.+.+.|+.++. ++++++++|.+++.+ ++.++
T Consensus 91 I~~-----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~ 159 (170)
T 2o6l_A 91 ITH-----GGANGIYEAIYHGIPMVGIPLFADQPDNI-AHMKARGAAVRVDFNTMSSTDLLNALKRVIND-PSYKE 159 (170)
T ss_dssp EEC-----CCHHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHTTTSEEECCTTTCCHHHHHHHHHHHHHC-HHHHH
T ss_pred EEc-----CCccHHHHHHHcCCCEEeccchhhHHHHH-HHHHHcCCeEEeccccCCHHHHHHHHHHHHcC-HHHHH
Confidence 973 23589999999999999998753 23 45667788999874 789999999999998 65433
No 50
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.28 E-value=3.2e-11 Score=117.55 Aligned_cols=134 Identities=13% Similarity=0.089 Sum_probs=95.4
Q ss_pred cEEEEEeeccc---cccCHHHHHHHHHHhhhcCCCeEEEEE-eCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEE
Q 044542 287 SLVMGVAGRLV---RDKGHPLLYEAFSSITRDHPGVYLLVA-GTGPWGRRYAELGQNVKVLGALEAHQLSEFYNALDVFV 362 (465)
Q Consensus 287 ~~~l~~~Grl~---~~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v 362 (465)
+.++++.|+.. ..+..+.++++++.+ +.+++++ |.+... ...+.++|.+.++++. .++|..||++|
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~--~~~~~~~v~~~~~~~~---~~ll~~~d~~v 307 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRRVILSRGWTELV--LPDDRDDCFAIDEVNF---QALFRRVAAVI 307 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCCEEEECTTTTCC--CSCCCTTEEEESSCCH---HHHGGGSSEEE
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC-----CCeEEEEeCCcccc--ccCCCCCEEEeccCCh---HHHhccCCEEE
Confidence 46666889874 456677777777765 3455554 765332 1334579999999975 45679999999
Q ss_pred ecccCCCCCcHHHHHHHHcCCeEEecCCCC----cceeeeeeCCceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHH
Q 044542 363 NPTLRPQGLDLTLIEAMHCGRTVLTPNYPS----IVRTVVVNEELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLA 435 (465)
Q Consensus 363 ~ps~~~eg~~~~~~EAma~G~PvI~s~~gg----~~~e~v~~~~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~ 435 (465)
.. .| ..++.||+++|+|+|+....+ .. +.+.+.+.|+.++. +.++++++|.++ .+ ++.++++++.
T Consensus 308 ~~----~G-~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~-~~~~~~~~~~ 379 (416)
T 1rrv_A 308 HH----GS-AGTEHVATRAGVPQLVIPRNTDQPYFA-GRVAALGIGVAHDGPTPTFESLSAALTTV-LA-PETRARAEAV 379 (416)
T ss_dssp EC----CC-HHHHHHHHHHTCCEEECCCSBTHHHHH-HHHHHHTSEEECSSSCCCHHHHHHHHHHH-TS-HHHHHHHHHH
T ss_pred ec----CC-hhHHHHHHHcCCCEEEccCCCCcHHHH-HHHHHCCCccCCCCCCCCHHHHHHHHHHh-hC-HHHHHHHHHH
Confidence 72 23 469999999999999987643 22 24556678888863 899999999999 87 7776666654
Q ss_pred HHH
Q 044542 436 CKE 438 (465)
Q Consensus 436 ~~~ 438 (465)
+++
T Consensus 380 ~~~ 382 (416)
T 1rrv_A 380 AGM 382 (416)
T ss_dssp TTT
T ss_pred HHH
Confidence 443
No 51
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=99.02 E-value=1e-09 Score=110.89 Aligned_cols=232 Identities=14% Similarity=0.137 Sum_probs=163.1
Q ss_pred HhhcccCEEEEeChhHHHHHHH-----HhCCCCCCEEEecCCCCCCCcc----CC-------------------------
Q 044542 224 RFFSSYNQHICISNSAAEVLVK-----IYQLPQRNVHVILNGVDETKFV----HD------------------------- 269 (465)
Q Consensus 224 ~~~~~~d~ii~~S~~~~~~~~~-----~~~~~~~ki~vi~ngvd~~~~~----~~------------------------- 269 (465)
..+..++.|-+||+-..+.+++ .+..-+.++.-|-|||+...+. |.
T Consensus 409 lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~ 488 (796)
T 1l5w_A 409 LCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEK 488 (796)
T ss_dssp HHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGG
T ss_pred HHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHh
Confidence 4457789999999999988864 2333467899999999876661 11
Q ss_pred -ccc--------------Ccc----cccccCCCCC-CcEEEEEeeccccccCHHH-HHHHHHHhhh--cC-----CCeEE
Q 044542 270 -PEA--------------GVR----FPEKLGVPAN-VSLVMGVAGRLVRDKGHPL-LYEAFSSITR--DH-----PGVYL 321 (465)
Q Consensus 270 -~~~--------------~~~----~r~~~g~~~~-~~~~l~~~Grl~~~Kg~~~-ll~a~~~l~~--~~-----~~~~l 321 (465)
.++ +.. +++++|++-+ +.+.++++.|+..+||+++ ++..+.++.+ .+ .++++
T Consensus 489 ~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~ 568 (796)
T 1l5w_A 489 FADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVF 568 (796)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEE
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEE
Confidence 000 111 3455677543 3478889999999999999 7887776654 12 35899
Q ss_pred EEEeCCcch--hH------HHHh----------cC--CeEEcCCCChhHHHHHHHhcCeEEeccc--CCCCCcHHHHHHH
Q 044542 322 LVAGTGPWG--RR------YAEL----------GQ--NVKVLGALEAHQLSEFYNALDVFVNPTL--RPQGLDLTLIEAM 379 (465)
Q Consensus 322 ~ivG~g~~~--~~------~~~l----------~~--~V~~~g~v~~~~~~~~~~~aDv~v~ps~--~~eg~~~~~~EAm 379 (465)
++.|.+... .. +..+ .+ +|.|+...+.+-...++.+||+.++||. . |.+|++-+=||
T Consensus 569 If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~-EAsGTs~MKam 647 (796)
T 1l5w_A 569 LFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGK-EASGTGNMKLA 647 (796)
T ss_dssp EEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTT-CCCCSHHHHHH
T ss_pred EEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCC-CCCchHHHHHH
Confidence 999986421 11 2222 24 7999988887778889999999999998 5 99999999999
Q ss_pred HcCCeEEecCCCCcceeeeee--CCceEEeCCCHHHHHHHHH------HHHhCChHHHHHHHHHHHHHHHhhCCHHHHHH
Q 044542 380 HCGRTVLTPNYPSIVRTVVVN--EELGYTFSPNVKSFVEALE------LVIRDGPKVLQRKGLACKEHALSMFTATKMAS 451 (465)
Q Consensus 380 a~G~PvI~s~~gg~~~e~v~~--~~~G~l~~~d~~~la~~i~------~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~ 451 (465)
..|.+.|++--|... |+.++ .++|++|..+++++.+.-. .+..+.+ .++++.++ .+...|||+.- +
T Consensus 648 ~NGaL~iGtLDGanv-Ei~e~vG~~NgF~FG~~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~---~~~g~fs~~~~-~ 721 (796)
T 1l5w_A 648 LNGALTVGTLDGANV-EIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDK-VLDAVLKE---LESGKYSDGDK-H 721 (796)
T ss_dssp HTTCEEEECSCTTHH-HHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCH-HHHHHHHH---HHHTTTTTTCT-T
T ss_pred HcCCeeecCcCCeee-ehhhccCCCcEEEecCCHHHHHHHHHcccCHHHHhhcCH-HHHHHHHH---HHcCCCCCCcH-H
Confidence 999999988777776 55433 5799999877777663211 1222213 33333333 34567999875 7
Q ss_pred HHHHHHHHhcC
Q 044542 452 AYERFFLRMKN 462 (465)
Q Consensus 452 ~~~~~~~~~~~ 462 (465)
.|.++|+.+++
T Consensus 722 ~y~~Ly~~L~~ 732 (796)
T 1l5w_A 722 AFDQMLHSIGK 732 (796)
T ss_dssp TTHHHHHHTST
T ss_pred HHHHHHHHHhc
Confidence 79999998864
No 52
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=99.01 E-value=1.3e-09 Score=110.01 Aligned_cols=231 Identities=15% Similarity=0.140 Sum_probs=160.5
Q ss_pred HhhcccCEEEEeChhHHHHHHH-----HhCCCCCCEEEecCCCCCCCcc----CC-------------------------
Q 044542 224 RFFSSYNQHICISNSAAEVLVK-----IYQLPQRNVHVILNGVDETKFV----HD------------------------- 269 (465)
Q Consensus 224 ~~~~~~d~ii~~S~~~~~~~~~-----~~~~~~~ki~vi~ngvd~~~~~----~~------------------------- 269 (465)
..+..++.|-+||+...+.+++ .+..-+.++.-|-|||+...+. |.
T Consensus 398 lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~ 477 (796)
T 2c4m_A 398 IACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLR 477 (796)
T ss_dssp HHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGG
T ss_pred HHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHH
Confidence 4467789999999999988874 2334467899999999988882 21
Q ss_pred --ccc--------------Ccc----cccccCCCCC-CcEEEEEeeccccccCHHH-HHHHHHHhhh--cC-----CCeE
Q 044542 270 --PEA--------------GVR----FPEKLGVPAN-VSLVMGVAGRLVRDKGHPL-LYEAFSSITR--DH-----PGVY 320 (465)
Q Consensus 270 --~~~--------------~~~----~r~~~g~~~~-~~~~l~~~Grl~~~Kg~~~-ll~a~~~l~~--~~-----~~~~ 320 (465)
.++ +.. ++++.|++-+ +.+.++++.|+..+||+++ ++..+.++.+ .+ .+++
T Consensus 478 ~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q 557 (796)
T 2c4m_A 478 SYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPART 557 (796)
T ss_dssp GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEE
T ss_pred hhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeE
Confidence 000 111 3455676543 3478889999999999999 8888777753 22 3589
Q ss_pred EEEEeCCcch--hH------HHHh----------cC--CeEEcCCCChhHHHHHHHhcCeEEeccc--CCCCCcHHHHHH
Q 044542 321 LLVAGTGPWG--RR------YAEL----------GQ--NVKVLGALEAHQLSEFYNALDVFVNPTL--RPQGLDLTLIEA 378 (465)
Q Consensus 321 l~ivG~g~~~--~~------~~~l----------~~--~V~~~g~v~~~~~~~~~~~aDv~v~ps~--~~eg~~~~~~EA 378 (465)
+++.|.+... .. +..+ .+ +|.|+...+.+-...++.+||+.++||. . |.+|++-+=+
T Consensus 558 ~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~-EAsGTs~MKa 636 (796)
T 2c4m_A 558 VIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGK-EASGTSNMKF 636 (796)
T ss_dssp EEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTS-CSCCHHHHHH
T ss_pred EEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCC-CCCchHHHHH
Confidence 9999986421 11 2222 24 7999988887778889999999999998 5 9999999999
Q ss_pred HHcCCeEEecCCCCcceeeeee--CCceEEeCC---CHHHHHHH---HHHHHhCChHHHHHHHHHHHHHHHhhCCHHHHH
Q 044542 379 MHCGRTVLTPNYPSIVRTVVVN--EELGYTFSP---NVKSFVEA---LELVIRDGPKVLQRKGLACKEHALSMFTATKMA 450 (465)
Q Consensus 379 ma~G~PvI~s~~gg~~~e~v~~--~~~G~l~~~---d~~~la~~---i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~ 450 (465)
|..|.+.|++--|... |+.++ .++|++|.. ++.++... ..-.-.+ + .++++.+ ..+...|||+.-
T Consensus 637 m~NGaL~iGtLDGanv-Ei~e~vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~-~-~~~~vvd---~~~~g~fs~~~~- 709 (796)
T 2c4m_A 637 MMNGALTLGTMDGANV-EIVDSVGEENAYIFGARVEELPALRESYKPYELYETV-P-GLKRALD---ALDNGTLNDNNS- 709 (796)
T ss_dssp HHTTCEEEEESSTHHH-HHHHHHCGGGSEEESCCTTTHHHHHHTCCHHHHHHHS-T-THHHHHH---TTTSSSSCCTTC-
T ss_pred HHcCCeEEeccCCeEe-ehhhhcCCCcEEEecCchhhHHHHHHhhChHHHhhcC-H-HHHHHHH---HHHcCCCCCCCH-
Confidence 9999999988777666 55433 469999986 44444432 1112222 2 2222222 223456888776
Q ss_pred HHHHHHHHHhcC
Q 044542 451 SAYERFFLRMKN 462 (465)
Q Consensus 451 ~~~~~~~~~~~~ 462 (465)
+.|.++|+.+++
T Consensus 710 ~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 710 GLFYDLKHSLIH 721 (796)
T ss_dssp CHHHHHHHHHHS
T ss_pred HHHHHHHHHHHh
Confidence 779999988864
No 53
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=99.00 E-value=3.5e-09 Score=107.41 Aligned_cols=230 Identities=14% Similarity=0.144 Sum_probs=160.2
Q ss_pred HhhcccCEEEEeChhHHHHHHHH-----hCCCCCCEEEecCCCCCCCc----cCCcc-----------------------
Q 044542 224 RFFSSYNQHICISNSAAEVLVKI-----YQLPQRNVHVILNGVDETKF----VHDPE----------------------- 271 (465)
Q Consensus 224 ~~~~~~d~ii~~S~~~~~~~~~~-----~~~~~~ki~vi~ngvd~~~~----~~~~~----------------------- 271 (465)
..+..++.|-+||+-..+.+++. +...++++.-|-|||+...+ .|.-.
T Consensus 433 lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~ 512 (824)
T 2gj4_A 433 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLS 512 (824)
T ss_dssp HHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGG
T ss_pred HHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHh
Confidence 44677899999999988877531 23346899999999998887 22100
Q ss_pred -c----------------Ccc----cccccCCCCC-CcEEEEEeeccccccCHHHH-HHHHHHhhh--cCC-----CeEE
Q 044542 272 -A----------------GVR----FPEKLGVPAN-VSLVMGVAGRLVRDKGHPLL-YEAFSSITR--DHP-----GVYL 321 (465)
Q Consensus 272 -~----------------~~~----~r~~~g~~~~-~~~~l~~~Grl~~~Kg~~~l-l~a~~~l~~--~~~-----~~~l 321 (465)
. +.. ++++.|++-+ +.+.++++.|+..+||++++ +..+.++.+ ..| +.++
T Consensus 513 y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~ 592 (824)
T 2gj4_A 513 YVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTV 592 (824)
T ss_dssp GTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEE
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEE
Confidence 0 011 3344666533 34888899999999999997 777777641 233 5799
Q ss_pred EEEeCCcch-hH-------HHHh----------cC--CeEEcCCCChhHHHHHHHhcCeEEeccc--CCCCCcHHHHHHH
Q 044542 322 LVAGTGPWG-RR-------YAEL----------GQ--NVKVLGALEAHQLSEFYNALDVFVNPTL--RPQGLDLTLIEAM 379 (465)
Q Consensus 322 ~ivG~g~~~-~~-------~~~l----------~~--~V~~~g~v~~~~~~~~~~~aDv~v~ps~--~~eg~~~~~~EAm 379 (465)
++.|.+... +. +.++ .+ +|.|+...+.+-...++.+||+.++||. . |.+|++-+=||
T Consensus 593 If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~-EAsGTs~MKam 671 (824)
T 2gj4_A 593 MIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGT-EASGTGNMKFM 671 (824)
T ss_dssp EEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTS-CSCCSHHHHHH
T ss_pred EEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCC-CCCchHHHHHH
Confidence 999986421 11 2222 24 7999988887778889999999999998 5 99999999999
Q ss_pred HcCCeEEecCCCCcceeeee--eCCceEEeCCCHHHHHHHHH-------HHHhCChHHHHHHHHHHHHHHHhhCCHHHHH
Q 044542 380 HCGRTVLTPNYPSIVRTVVV--NEELGYTFSPNVKSFVEALE-------LVIRDGPKVLQRKGLACKEHALSMFTATKMA 450 (465)
Q Consensus 380 a~G~PvI~s~~gg~~~e~v~--~~~~G~l~~~d~~~la~~i~-------~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~ 450 (465)
..|.+.|++--|... |+.. ..++|++|...++++ .++. .+... .+.++++.++ .+...|+|..-
T Consensus 672 lNGaLtigtlDGanv-Ei~e~vG~~Ngf~FG~~~~ev-~~l~~~~~~a~~~Y~~-~~~l~~v~d~---i~~g~fs~~~~- 744 (824)
T 2gj4_A 672 LNGALTIGTMDGANV-EMAEEAGEENFFIFGMRVEDV-DRLDQRGYNAQEYYDR-IPELRQIIEQ---LSSGFFSPKQP- 744 (824)
T ss_dssp HTTCEEEECSCTTHH-HHHHHHCGGGSEECSCCHHHH-HHHHHHCCCHHHHHHH-CHHHHHHHHH---HHHTTTCTTST-
T ss_pred HcCceEEEEecCccc-hhhhccCCCCEEEeCCcHHHH-HHHHHcCCCHHHHhcC-CHHHHHHHHH---HHhCCCCCCCh-
Confidence 999999998777665 5433 467899998766666 4442 23333 2233333333 34567998776
Q ss_pred HHHHHHHHHhc
Q 044542 451 SAYERFFLRMK 461 (465)
Q Consensus 451 ~~~~~~~~~~~ 461 (465)
+.|.++|++++
T Consensus 745 ~~y~~ly~~l~ 755 (824)
T 2gj4_A 745 DLFKDIVNMLM 755 (824)
T ss_dssp TTTHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 67888887764
No 54
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=98.56 E-value=2.1e-05 Score=76.49 Aligned_cols=203 Identities=14% Similarity=-0.017 Sum_probs=112.0
Q ss_pred HhhcccCEEEEeChhHHHH-HHHHh-CCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccccC
Q 044542 224 RFFSSYNQHICISNSAAEV-LVKIY-QLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRDKG 301 (465)
Q Consensus 224 ~~~~~~d~ii~~S~~~~~~-~~~~~-~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~Kg 301 (465)
..+.+++.+++.|-...+. ..+.+ ... .++..|..-..... ........+..+-++..++++.+++..|..... .
T Consensus 211 ~~~~~~~~vl~ns~~eLE~~~~~~~~~~~-~~v~~vGPl~~~~~-~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~-~ 287 (454)
T 3hbf_A 211 LELPRANAVAINSFATIHPLIENELNSKF-KLLLNVGPFNLTTP-QRKVSDEHGCLEWLDQHENSSVVYISFGSVVTP-P 287 (454)
T ss_dssp HHGGGSSCEEESSCGGGCHHHHHHHHTTS-SCEEECCCHHHHSC-CSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCC-C
T ss_pred HhhccCCEEEECChhHhCHHHHHHHHhcC-CCEEEECCcccccc-cccccchHHHHHHHhcCCCCceEEEecCCCCcC-C
Confidence 4567899999988654432 11111 121 35554433111000 000111122333333333455777788887642 2
Q ss_pred HHHHHHHHHHhhhcCCCeEEEE-EeCCcc----hhHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHH
Q 044542 302 HPLLYEAFSSITRDHPGVYLLV-AGTGPW----GRRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLI 376 (465)
Q Consensus 302 ~~~ll~a~~~l~~~~~~~~l~i-vG~g~~----~~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~ 376 (465)
.+.+.+.+..+.+. +.++++ +|.+.. ....++..+++.+.+|+|+ ..++..+++.++-++. | -++++
T Consensus 288 ~~~~~el~~~l~~~--~~~flw~~~~~~~~~lp~~~~~~~~~~~~vv~w~Pq---~~vL~h~~v~~fvtH~--G-~~S~~ 359 (454)
T 3hbf_A 288 PHELTALAESLEEC--GFPFIWSFRGDPKEKLPKGFLERTKTKGKIVAWAPQ---VEILKHSSVGVFLTHS--G-WNSVL 359 (454)
T ss_dssp HHHHHHHHHHHHHH--CCCEEEECCSCHHHHSCTTHHHHTTTTEEEESSCCH---HHHHHSTTEEEEEECC--C-HHHHH
T ss_pred HHHHHHHHHHHHhC--CCeEEEEeCCcchhcCCHhHHhhcCCceEEEeeCCH---HHHHhhcCcCeEEecC--C-cchHH
Confidence 34444444444432 344444 454321 1122334579999999975 4788899955544432 2 46999
Q ss_pred HHHHcCCeEEecCCCCcc---eeeeeeC-CceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 044542 377 EAMHCGRTVLTPNYPSIV---RTVVVNE-ELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLACKEH 439 (465)
Q Consensus 377 EAma~G~PvI~s~~gg~~---~e~v~~~-~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~~~~ 439 (465)
||+++|+|+|+-...+-. ...+.+. +.|+.++. +.+++.+++.+++.+ + ..+++++++++.
T Consensus 360 Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~-~-~~~~~r~~a~~l 427 (454)
T 3hbf_A 360 ECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSS-E-KGGIMRQKIVKL 427 (454)
T ss_dssp HHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSS-H-HHHHHHHHHHHH
T ss_pred HHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCC-C-hHHHHHHHHHHH
Confidence 999999999997754311 0234443 67887763 799999999999987 4 223444444443
No 55
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=98.56 E-value=1.8e-05 Score=77.63 Aligned_cols=131 Identities=16% Similarity=0.109 Sum_probs=82.0
Q ss_pred CCCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEE-EeCC--cc-hhHHHHh--cCCeEEcCCCChhHHHHHHH-
Q 044542 284 ANVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLV-AGTG--PW-GRRYAEL--GQNVKVLGALEAHQLSEFYN- 356 (465)
Q Consensus 284 ~~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~i-vG~g--~~-~~~~~~l--~~~V~~~g~v~~~~~~~~~~- 356 (465)
++++.+++..|.....-+.+.+.+++..+.+. +.++++ +|.+ .. ....++. .+++.+.+++|+. .+|.
T Consensus 274 ~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~--~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~---~vL~h 348 (463)
T 2acv_A 274 PDKSVVFLCFGSMGVSFGPSQIREIALGLKHS--GVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQV---EVLAH 348 (463)
T ss_dssp CTTCEEEEECCSSCCCCCHHHHHHHHHHHHHH--TCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHH---HHHHS
T ss_pred CCCceEEEEeccccccCCHHHHHHHHHHHHhC--CCcEEEEECCCcccCChhHHHhhccCCCEEEEccCCHH---HHhCC
Confidence 34457777888876222333344444444332 345544 4543 12 1222334 5789999999754 4576
Q ss_pred -hcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---ee-eeeCCceEEe-C-------C-CHHHHHHHHHHHH
Q 044542 357 -ALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TV-VVNEELGYTF-S-------P-NVKSFVEALELVI 422 (465)
Q Consensus 357 -~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~-v~~~~~G~l~-~-------~-d~~~la~~i~~ll 422 (465)
++|++|. + |-.++++||+++|+|+|+-...+-.. .. +.+-+.|+.+ . . +.+++.++|.+++
T Consensus 349 ~~~~~fvt---h--~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll 423 (463)
T 2acv_A 349 KAIGGFVS---H--CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLM 423 (463)
T ss_dssp TTEEEEEE---C--CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHT
T ss_pred CccCeEEe---c--CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHH
Confidence 5777775 2 23479999999999999987643210 13 3566788888 2 4 7899999999999
Q ss_pred hC
Q 044542 423 RD 424 (465)
Q Consensus 423 ~~ 424 (465)
++
T Consensus 424 ~~ 425 (463)
T 2acv_A 424 DK 425 (463)
T ss_dssp CT
T ss_pred hc
Confidence 63
No 56
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=98.51 E-value=0.00027 Score=69.62 Aligned_cols=131 Identities=7% Similarity=-0.142 Sum_probs=78.0
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEE-eCCcc-----------hhHH-HHhcCC---------eEE
Q 044542 285 NVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVA-GTGPW-----------GRRY-AELGQN---------VKV 342 (465)
Q Consensus 285 ~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~~-----------~~~~-~~l~~~---------V~~ 342 (465)
+++.+.+..|.... ...+.+.+.+..+.+. +.+++++ |.+.. ...+ ..+.++ +.+
T Consensus 267 ~~~vvyvs~GS~~~-~~~~~~~~~~~al~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v 343 (480)
T 2vch_A 267 LGSVLYVSFGSGGT-LTCEQLNELALGLADS--EQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVI 343 (480)
T ss_dssp TTCEEEEECTTTCC-CCHHHHHHHHHHHHHT--TCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEE
T ss_pred CCceEEEecccccC-CCHHHHHHHHHHHHhc--CCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEE
Confidence 34477778888753 2344444444444432 3455444 43210 0111 123333 455
Q ss_pred cCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eee-eeCCceEEeC-----C-CHH
Q 044542 343 LGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVV-VNEELGYTFS-----P-NVK 412 (465)
Q Consensus 343 ~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v-~~~~~G~l~~-----~-d~~ 412 (465)
.+++|+. .+|+.+++.++-++ |--++++||+++|+|+|+-...+-.. ..+ .+-+.|+.++ . +.+
T Consensus 344 ~~w~Pq~---~vL~h~~v~~fvtH---gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~ 417 (480)
T 2vch_A 344 PFWAPQA---QVLAHPSTGGFLTH---CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRRE 417 (480)
T ss_dssp ESCCCHH---HHHHSTTEEEEEEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHH
T ss_pred eCccCHH---HHhCCCCcCeEEec---ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHH
Confidence 5699753 78999996444342 22469999999999999977643210 122 4556676664 3 789
Q ss_pred HHHHHHHHHHhC
Q 044542 413 SFVEALELVIRD 424 (465)
Q Consensus 413 ~la~~i~~ll~~ 424 (465)
+++++|.+++.+
T Consensus 418 ~l~~av~~vl~~ 429 (480)
T 2vch_A 418 EVARVVKGLMEG 429 (480)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHHhcC
Confidence 999999999984
No 57
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=98.49 E-value=3.2e-06 Score=79.81 Aligned_cols=107 Identities=12% Similarity=0.091 Sum_probs=76.5
Q ss_pred cccccccCCCCCCcEEEEEeec-cccccCHH--HHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc--------CCe-E
Q 044542 274 VRFPEKLGVPANVSLVMGVAGR-LVRDKGHP--LLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG--------QNV-K 341 (465)
Q Consensus 274 ~~~r~~~g~~~~~~~~l~~~Gr-l~~~Kg~~--~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~--------~~V-~ 341 (465)
..+++++|+..+++++++..|. ..+.|... .+.+++..|.++ ++++++.|...+.+..+++. .++ .
T Consensus 168 ~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~ 245 (348)
T 1psw_A 168 SYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKDHEAGNEILAALNTEQQAWCRN 245 (348)
T ss_dssp HHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEE
T ss_pred HHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHHC--CCeEEEEeChhhHHHHHHHHHhhhhccccceEe
Confidence 3455667776555677778887 54666655 888888888765 67888888766555444432 134 5
Q ss_pred EcCCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEec
Q 044542 342 VLGALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTP 388 (465)
Q Consensus 342 ~~g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s 388 (465)
+.|..+-.++..+++.||++|... + | .+-.|.++|+|+|+-
T Consensus 246 l~g~~sl~e~~ali~~a~l~I~~D----s-g-~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 246 LAGETQLDQAVILIAACKAIVTND----S-G-LMHVAAALNRPLVAL 286 (348)
T ss_dssp CTTTSCHHHHHHHHHTSSEEEEES----S-H-HHHHHHHTTCCEEEE
T ss_pred ccCcCCHHHHHHHHHhCCEEEecC----C-H-HHHHHHHcCCCEEEE
Confidence 688888899999999999999753 2 2 333499999999974
No 58
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=98.39 E-value=1.2e-06 Score=79.39 Aligned_cols=91 Identities=7% Similarity=0.036 Sum_probs=60.9
Q ss_pred cEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCc-chhHHHHhc---CCeEEcCCCChhHHHHHHHhcCeEE
Q 044542 287 SLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGP-WGRRYAELG---QNVKVLGALEAHQLSEFYNALDVFV 362 (465)
Q Consensus 287 ~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~-~~~~~~~l~---~~V~~~g~v~~~~~~~~~~~aDv~v 362 (465)
+.+++++|......-...+++ .+.+. .. -.++.|.+. ..+.+++.. .++.+.+++ +++.++|++||++|
T Consensus 158 ~~ILv~~GG~d~~~l~~~vl~---~L~~~-~~-i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~--~~m~~~m~~aDlvI 230 (282)
T 3hbm_A 158 YDFFICMGGTDIKNLSLQIAS---ELPKT-KI-ISIATSSSNPNLKKLQKFAKLHNNIRLFIDH--ENIAKLMNESNKLI 230 (282)
T ss_dssp EEEEEECCSCCTTCHHHHHHH---HSCTT-SC-EEEEECTTCTTHHHHHHHHHTCSSEEEEESC--SCHHHHHHTEEEEE
T ss_pred CeEEEEECCCchhhHHHHHHH---HhhcC-CC-EEEEECCCchHHHHHHHHHhhCCCEEEEeCH--HHHHHHHHHCCEEE
Confidence 356667787654432333344 44332 23 355667653 334444432 589999998 79999999999999
Q ss_pred ecccCCCCCcHHHHHHHHcCCeEEecCC
Q 044542 363 NPTLRPQGLDLTLIEAMHCGRTVLTPNY 390 (465)
Q Consensus 363 ~ps~~~eg~~~~~~EAma~G~PvI~s~~ 390 (465)
.+ . |.++.|++++|+|.|....
T Consensus 231 ~~----g--G~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 231 IS----A--SSLVNEALLLKANFKAICY 252 (282)
T ss_dssp EE----S--SHHHHHHHHTTCCEEEECC
T ss_pred EC----C--cHHHHHHHHcCCCEEEEeC
Confidence 72 2 3699999999999998654
No 59
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=97.81 E-value=9.8e-05 Score=76.87 Aligned_cols=188 Identities=11% Similarity=0.089 Sum_probs=112.9
Q ss_pred HhhcccCEEEEeChhHHHHHHHHhCCCCCCEEEecCCCCCCCccC--CcccCcccccccCCCCCCcEEEEEeecccccc-
Q 044542 224 RFFSSYNQHICISNSAAEVLVKIYQLPQRNVHVILNGVDETKFVH--DPEAGVRFPEKLGVPANVSLVMGVAGRLVRDK- 300 (465)
Q Consensus 224 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~--~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~K- 300 (465)
...++.|.+++.|+...+.+.+.+++++.++.....+-....+.. .......+++++++++++ .+|+|+-.+....
T Consensus 474 ~~~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~k-k~ILyaPT~r~~~~ 552 (729)
T 3l7i_A 474 RETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDK-KVIMYAPTWRDDEF 552 (729)
T ss_dssp HHHTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSC-EEEEECCCCCGGGC
T ss_pred HhhccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHHHhcccchHHHHHHHHHHhCCCCCC-eEEEEeeeeeCCcc
Confidence 345778999999999999999989987666665544322112211 112234578889998877 5555887665431
Q ss_pred ---C-----HHHHHHHHHHhhhcCCCeEEEEEeCCcchhH--HHHhcCCeEEcCCCChhHHHHHHHhcCeEEecccCCCC
Q 044542 301 ---G-----HPLLYEAFSSITRDHPGVYLLVAGTGPWGRR--YAELGQNVKVLGALEAHQLSEFYNALDVFVNPTLRPQG 370 (465)
Q Consensus 301 ---g-----~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~--~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~~~eg 370 (465)
| ...-++.+.+... ++..+++-......+. ...+.+.+...... .++.+++..||++|.=
T Consensus 553 ~~~~~~~~~~~~~~~~l~~~l~--~~~~li~r~Hp~~~~~~~~~~~~~~~~~~~~~--~di~~ll~~aD~lITD------ 622 (729)
T 3l7i_A 553 VSKGKYLFELKIDLDNLYKELG--DDYVILLRMHYLISNALDLSGYENFAIDVSNY--NDVSELFLISDCLITD------ 622 (729)
T ss_dssp CGGGSSCCCCTTCHHHHHHHHT--TTEEEEECCCHHHHTTCCCTTCTTTEEECTTC--SCHHHHHHTCSEEEES------
T ss_pred ccccccccchhhHHHHHHHHcC--CCeEEEEecCcchhccccccccCCcEEeCCCC--cCHHHHHHHhCEEEee------
Confidence 1 1112333333222 3666666553211111 11122444444332 5899999999999962
Q ss_pred CcHHHHHHHHcCCeEEecCC--C-------CcceeeeeeCCceEEeCCCHHHHHHHHHHHHhC
Q 044542 371 LDLTLIEAMHCGRTVLTPNY--P-------SIVRTVVVNEELGYTFSPNVKSFVEALELVIRD 424 (465)
Q Consensus 371 ~~~~~~EAma~G~PvI~s~~--g-------g~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~ 424 (465)
++.++.|++..++|||.... . |.--+ ..+.-.|-++. +.++|.++|......
T Consensus 623 ySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d-~~~~~pg~~~~-~~~eL~~~i~~~~~~ 683 (729)
T 3l7i_A 623 YSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMN-YMEDLPGPIYT-EPYGLAKELKNLDKV 683 (729)
T ss_dssp SCTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSC-TTSSSSSCEES-SHHHHHHHHTTHHHH
T ss_pred chHHHHhHHhhCCCEEEecCCHHHHhhccCCcccC-hhHhCCCCeEC-CHHHHHHHHhhhhcc
Confidence 34499999999999997621 1 11101 11223455555 899999999988764
No 60
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=97.80 E-value=0.00027 Score=69.11 Aligned_cols=198 Identities=11% Similarity=-0.027 Sum_probs=110.7
Q ss_pred hhcccCEEEEeChhHHHH-----HHHHhCCCCCCEEEecCCCCCCCccCCcccCcccccccCCCCCCcEEEEEeeccccc
Q 044542 225 FFSSYNQHICISNSAAEV-----LVKIYQLPQRNVHVILNGVDETKFVHDPEAGVRFPEKLGVPANVSLVMGVAGRLVRD 299 (465)
Q Consensus 225 ~~~~~d~ii~~S~~~~~~-----~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~r~~~g~~~~~~~~l~~~Grl~~~ 299 (465)
..++++.+++.|-...+. ++..+ .++..|..-.. ..-........++.+-++..++++.+++..|.....
T Consensus 210 ~~~~~~~vl~ns~~~le~~~~~~~~~~~----~~~~~vGpl~~-~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~ 284 (456)
T 2c1x_A 210 VLPKATAVFINSFEELDDSLTNDLKSKL----KTYLNIGPFNL-ITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTP 284 (456)
T ss_dssp HGGGSSCEEESSCGGGCHHHHHHHHHHS----SCEEECCCHHH-HC---------CHHHHHHTSCTTCEEEEECCSSCCC
T ss_pred hhhhCCEEEECChHHHhHHHHHHHHhcC----CCEEEecCccc-CcccccccchhhHHHHHhcCCCcceEEEecCccccC
Confidence 347789998888554433 24432 24554442111 000000000112223233333445777788887643
Q ss_pred cCHHHHHHHHHHhhhcCCCeEE-EEEeCCcc----hhHHHHhcCCeEEcCCCChhHHHHHHH--hcCeEEecccCCCCCc
Q 044542 300 KGHPLLYEAFSSITRDHPGVYL-LVAGTGPW----GRRYAELGQNVKVLGALEAHQLSEFYN--ALDVFVNPTLRPQGLD 372 (465)
Q Consensus 300 Kg~~~ll~a~~~l~~~~~~~~l-~ivG~g~~----~~~~~~l~~~V~~~g~v~~~~~~~~~~--~aDv~v~ps~~~eg~~ 372 (465)
..+.+.+.+..+.+. +.++ ..+|.... ....++..+++.+.+++|+. ++|. ++|++|. + |-.
T Consensus 285 -~~~~~~~~~~~l~~~--~~~~lw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~---~vL~h~~~~~fvt---h--~G~ 353 (456)
T 2c1x_A 285 -PPAEVVALSEALEAS--RVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQA---EVLAHEAVGAFVT---H--CGW 353 (456)
T ss_dssp -CHHHHHHHHHHHHHH--TCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHH---HHHTSTTEEEEEE---C--CCH
T ss_pred -CHHHHHHHHHHHHhc--CCeEEEEECCcchhhCCHHHHhhcCCceEEecCCCHH---HHhcCCcCCEEEe---c--CCc
Confidence 234444444444332 2334 44554321 11223445789999999753 5688 6778875 2 235
Q ss_pred HHHHHHHHcCCeEEecCCCCcce---eeeeeC-CceEEeCC---CHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 044542 373 LTLIEAMHCGRTVLTPNYPSIVR---TVVVNE-ELGYTFSP---NVKSFVEALELVIRDGPKVLQRKGLACKEHA 440 (465)
Q Consensus 373 ~~~~EAma~G~PvI~s~~gg~~~---e~v~~~-~~G~l~~~---d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~ 440 (465)
++++||+++|+|+|+-...+-.. ..+.+. +.|+.++. +.+++.++|.+++.+ ++ .+++++++++..
T Consensus 354 ~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~-~~-~~~~r~~a~~l~ 426 (456)
T 2c1x_A 354 NSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQ-EK-GKKLRENLRALR 426 (456)
T ss_dssp HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHS-HH-HHHHHHHHHHHH
T ss_pred chHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCC-Cc-HHHHHHHHHHHH
Confidence 69999999999999987643210 234455 67888763 799999999999998 54 445555555443
No 61
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=97.77 E-value=0.00059 Score=67.25 Aligned_cols=147 Identities=12% Similarity=-0.013 Sum_probs=91.1
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEE-eCCc-------c-hhHHHHhcCCeEEcCCCChhHHHHHH
Q 044542 285 NVSLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVA-GTGP-------W-GRRYAELGQNVKVLGALEAHQLSEFY 355 (465)
Q Consensus 285 ~~~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~iv-G~g~-------~-~~~~~~l~~~V~~~g~v~~~~~~~~~ 355 (465)
+++.+++..|.... ...+.+.+.+..+.+. +.+++++ |... . ....++..+++.+.+++|+. .+|
T Consensus 294 ~~~vv~vs~GS~~~-~~~~~~~~~~~~l~~~--~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~---~~L 367 (482)
T 2pq6_A 294 PGSVVYVNFGSTTV-MTPEQLLEFAWGLANC--KKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQD---KVL 367 (482)
T ss_dssp TTCEEEEECCSSSC-CCHHHHHHHHHHHHHT--TCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHH---HHH
T ss_pred CCceEEEecCCccc-CCHHHHHHHHHHHHhc--CCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHH---HHh
Confidence 34477777888653 2334444444444332 4555554 4321 1 22234456899999999854 478
Q ss_pred HhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce---eeee-eCCceEEeCC--CHHHHHHHHHHHHhCChHHH
Q 044542 356 NALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR---TVVV-NEELGYTFSP--NVKSFVEALELVIRDGPKVL 429 (465)
Q Consensus 356 ~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~---e~v~-~~~~G~l~~~--d~~~la~~i~~ll~~~~~~~ 429 (465)
+.+++-++-+ + |-.++++||+++|+|+|+-...+-.. ..+. +-+.|+.++. +.+++.++|.+++.+ ++ .
T Consensus 368 ~h~~~~~~vt-h--~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~~-~~-~ 442 (482)
T 2pq6_A 368 NHPSIGGFLT-H--CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAG-DK-G 442 (482)
T ss_dssp TSTTEEEEEE-C--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTS-HH-H
T ss_pred cCCCCCEEEe-c--CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHcC-Cc-H
Confidence 7766633323 2 23579999999999999987653210 1233 4567888764 899999999999998 64 3
Q ss_pred HHHHHHHHHHHHh
Q 044542 430 QRKGLACKEHALS 442 (465)
Q Consensus 430 ~~~~~~~~~~~~~ 442 (465)
+++++++++..+.
T Consensus 443 ~~~r~~a~~l~~~ 455 (482)
T 2pq6_A 443 KKMKQKAMELKKK 455 (482)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5566665555433
No 62
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=97.65 E-value=9e-05 Score=64.31 Aligned_cols=76 Identities=7% Similarity=0.039 Sum_probs=53.5
Q ss_pred CeEEcCCCChhHHHHHHH-hcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce-------eeeeeCCceEEeCCC
Q 044542 339 NVKVLGALEAHQLSEFYN-ALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR-------TVVVNEELGYTFSPN 410 (465)
Q Consensus 339 ~V~~~g~v~~~~~~~~~~-~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~-------e~v~~~~~G~l~~~d 410 (465)
++...+++ +++..+|+ .||++|. + +-..+++|++++|+|.|.-..+...+ +.+.+.+.++++ +
T Consensus 115 ~v~v~~f~--~~m~~~l~~~AdlvIs---h--aGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~--~ 185 (224)
T 2jzc_A 115 KVIGFDFS--TKMQSIIRDYSDLVIS---H--AGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC--A 185 (224)
T ss_dssp EEEECCSS--SSHHHHHHHHCSCEEE---S--SCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE--C
T ss_pred eEEEeecc--chHHHHHHhcCCEEEE---C--CcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc--C
Confidence 56677887 69999999 9999997 3 23569999999999999877653211 123333445555 5
Q ss_pred HHHHHHHHHHHHh
Q 044542 411 VKSFVEALELVIR 423 (465)
Q Consensus 411 ~~~la~~i~~ll~ 423 (465)
++.|.++|.++..
T Consensus 186 ~~~L~~~i~~l~~ 198 (224)
T 2jzc_A 186 PTETGLIAGLRAS 198 (224)
T ss_dssp SCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 6777777777633
No 63
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.83 E-value=0.0039 Score=58.46 Aligned_cols=104 Identities=12% Similarity=0.068 Sum_probs=74.7
Q ss_pred cccCCCCCCcEEEEEeeccccccCH--HHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc-----CCeEEcCCCChhH
Q 044542 278 EKLGVPANVSLVMGVAGRLVRDKGH--PLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG-----QNVKVLGALEAHQ 350 (465)
Q Consensus 278 ~~~g~~~~~~~~l~~~Grl~~~Kg~--~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~-----~~V~~~g~v~~~~ 350 (465)
++.|++.+++++++..|.-.+.|.. +.+.+++..+.++ +.++++.|...+.+..+++. ..+.+.|..+-.+
T Consensus 177 ~~~g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~--g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e 254 (349)
T 3tov_A 177 SSHGLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL--GYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGP 254 (349)
T ss_dssp HHTTCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH--TCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHH
T ss_pred HHcCCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC--CCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHH
Confidence 3456665666777777765556665 5788888888765 56778888766665555442 3466788888899
Q ss_pred HHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecC
Q 044542 351 LSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPN 389 (465)
Q Consensus 351 ~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~ 389 (465)
+..+++.||++|.+ ++ |..-+ |.++|+|+|+-=
T Consensus 255 ~~ali~~a~~~i~~----Ds-G~~Hl-Aaa~g~P~v~lf 287 (349)
T 3tov_A 255 LAAAMNRCNLLITN----DS-GPMHV-GISQGVPIVALY 287 (349)
T ss_dssp HHHHHHTCSEEEEE----SS-HHHHH-HHTTTCCEEEEC
T ss_pred HHHHHHhCCEEEEC----CC-CHHHH-HHhcCCCEEEEE
Confidence 99999999999974 22 33444 999999999853
No 64
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.35 E-value=0.015 Score=53.88 Aligned_cols=130 Identities=15% Similarity=0.135 Sum_probs=81.7
Q ss_pred CcEEEEEeeccccccCHH--HHHHHHHHhhhcCCCeEEEEE-eCCcchhHHHHhc---CCeEEcCCCChhHHHHHHHhcC
Q 044542 286 VSLVMGVAGRLVRDKGHP--LLYEAFSSITRDHPGVYLLVA-GTGPWGRRYAELG---QNVKVLGALEAHQLSEFYNALD 359 (465)
Q Consensus 286 ~~~~l~~~Grl~~~Kg~~--~ll~a~~~l~~~~~~~~l~iv-G~g~~~~~~~~l~---~~V~~~g~v~~~~~~~~~~~aD 359 (465)
++++++..|.-.+.|... .+.+++..+.++ +.++++. |...+.+..+++. .++.+.|..+-.++..+++.||
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali~~a~ 255 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADS--GIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAK 255 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTT--CCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHHHTCS
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHC--CCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHHHhCC
Confidence 346766777655666654 778888888653 6778886 5333333344432 4677889888899999999999
Q ss_pred eEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcce--------eeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 360 VFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVR--------TVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 360 v~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~--------e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
++|.. ++ |..=+ |.++|+|+|+-=.+..+. ..+..+... .... ++++..+++.++++.
T Consensus 256 l~I~~----DS-G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~-cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 256 FVVSV----DT-GLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGN-ELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp EEEEE----SS-HHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGG-CGGGCCHHHHHHHHHHTTTT
T ss_pred EEEec----CC-cHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCCcc-cccCCCHHHHHHHHHHHHHH
Confidence 99974 22 33444 777999999742111110 111111111 1223 788888888887765
No 65
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=95.78 E-value=0.069 Score=54.54 Aligned_cols=127 Identities=10% Similarity=0.059 Sum_probs=93.2
Q ss_pred cEEEEEeeccccccCHHH-HHHHHHHh---hhc-------------CCCeEEEEEeCCc-c----hhHHHH---h-----
Q 044542 287 SLVMGVAGRLVRDKGHPL-LYEAFSSI---TRD-------------HPGVYLLVAGTGP-W----GRRYAE---L----- 336 (465)
Q Consensus 287 ~~~l~~~Grl~~~Kg~~~-ll~a~~~l---~~~-------------~~~~~l~ivG~g~-~----~~~~~~---l----- 336 (465)
.+..+++-|+..+|...+ ++..+.++ ++. ..+..+++.|.-. . +..++. +
T Consensus 600 sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN 679 (879)
T 1ygp_A 600 TLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADIVN 679 (879)
T ss_dssp CEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHT
T ss_pred eeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhc
Confidence 388889999999999988 56554433 333 2458899988632 1 111111 1
Q ss_pred -----cC--CeEEcCCCChhHHHHHHHhcCeEEecccC-CCCCcHHHHHHHHcCCeEEecCCCCcceeeeee--CCceEE
Q 044542 337 -----GQ--NVKVLGALEAHQLSEFYNALDVFVNPTLR-PQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVN--EELGYT 406 (465)
Q Consensus 337 -----~~--~V~~~g~v~~~~~~~~~~~aDv~v~ps~~-~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~--~~~G~l 406 (465)
.+ +|.|+...+-.-...++.+||+-...|.. .|..|++-+-+|.-|.+.|++--|... |+.++ .+++++
T Consensus 680 ~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGanv-Ei~e~vG~eN~fi 758 (879)
T 1ygp_A 680 NDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANV-EITREIGEDNVFL 758 (879)
T ss_dssp TCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHH-HHHHHHCGGGSEE
T ss_pred cChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccchhH-HHHHHcCcccEEE
Confidence 13 69999998878888899999999996652 489999999999999999999888877 66544 568888
Q ss_pred eCCCHHHH
Q 044542 407 FSPNVKSF 414 (465)
Q Consensus 407 ~~~d~~~l 414 (465)
|-.+.+++
T Consensus 759 FG~~~~ev 766 (879)
T 1ygp_A 759 FGNLSENV 766 (879)
T ss_dssp ESCCHHHH
T ss_pred ccCCHHHH
Confidence 87654443
No 66
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=93.79 E-value=0.25 Score=43.23 Aligned_cols=45 Identities=22% Similarity=0.248 Sum_probs=30.7
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH 128 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~ 128 (465)
.+++||||+.... |=...-+..|+++|.+ +|+|+|+++.......
T Consensus 8 ~~~~m~ILlTNDD-------Gi~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~ 52 (261)
T 3ty2_A 8 ATPKLRLLLSNDD-------GVYAKGLAILAKTLAD-LGEVDVVAPDRNRSGA 52 (261)
T ss_dssp ---CCEEEEECSS-------CTTCHHHHHHHHHHTT-TSEEEEEEESSCCTTC
T ss_pred cCCCCeEEEEcCC-------CCCCHHHHHHHHHHHh-cCCEEEEecCCCCcCc
Confidence 3456999887764 1123347889999988 7899999998765443
No 67
>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*
Probab=92.85 E-value=3.6 Score=34.18 Aligned_cols=336 Identities=13% Similarity=0.109 Sum_probs=177.7
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCc-ccCCcceEEEeecCCCccccCCCCCCcE
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHND-VHQGNLHVHFAANDHGSVNLNNDGAFDY 158 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~Di 158 (465)
|||+++... |....|...+..+.-..+.+.||+|+++...+....... .....-.+.....+.-.....--.+.|+
T Consensus 2 mricifmar---glegcgvtkfsleqrdwfiknghevtlvyakdksftrtsshdhksfsipvilakeydkalklvndcdi 78 (401)
T 1xv5_A 2 MRICIFMAR---GLEGCGVTKFSLEQRDWFIKNGHEVTLVYAKDKSFTRTSSHDHKSFSIPVILAKEYDKALKLVNDCDI 78 (401)
T ss_dssp CEEEEEETT---CCCSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCTTTTSSSCTTTCEEECTTTCHHHHHHHHTSCSE
T ss_pred ceEEEEeec---cccccCceeeehhhhhhhhcCCcEEEEEEeccccccccccccCccccceeEehhhhHHHhhhhccCcE
Confidence 799998764 346678889988889999999999999887654432221 1111111222111100000002356899
Q ss_pred EEecCCch-----------hHHhhhcCC--cEEEEecchhHHHHhhhhhhhhhhcCCCCCCCchhhhhhhhHHHHHHHHh
Q 044542 159 VHTESVSL-----------PHWRAKMVP--NVAVTWHGIWYEVMHSKLFGELFSNQNGVLPGSMTELQEAMPRLVDEIRF 225 (465)
Q Consensus 159 I~~~~~~~-----------~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (465)
+++++... ...+..-.| ++++.-|+.....+... +....-
T Consensus 79 liinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvlslrrn---------------------------lgleet 131 (401)
T 1xv5_A 79 LIINSVPATSVQEATINNYKKLLDNIKPSIRVVVYQHDHSVLSLRRN---------------------------LGLEET 131 (401)
T ss_dssp EEEEECCBTTSCHHHHHHHHHHHHHSCTTSEEEEEECCCSHHHHTTB---------------------------SSHHHH
T ss_pred EEEccCccchhHHHHHhhHHHHHhcCCCceEEEEEeccchhhhhhhh---------------------------cChHHh
Confidence 88876421 111111122 27777787433222111 001134
Q ss_pred hcccCEEEEeChh---HHHHHHHHhCCCCCCEEEecCCCCC----CCccCCcccCcccccccCCCCC--CcEEEEEeecc
Q 044542 226 FSSYNQHICISNS---AAEVLVKIYQLPQRNVHVILNGVDE----TKFVHDPEAGVRFPEKLGVPAN--VSLVMGVAGRL 296 (465)
Q Consensus 226 ~~~~d~ii~~S~~---~~~~~~~~~~~~~~ki~vi~ngvd~----~~~~~~~~~~~~~r~~~g~~~~--~~~~l~~~Grl 296 (465)
.+++|.|+..|+. .+-.+.+.|+ +.+... ..+.. -.|+|.- +...+|..+--.-. .--+=-++||-
T Consensus 132 vrradvifshsdngdfnkvlmkewyp---etvslf-ddieeaptvynfqppm-divkvrstywkdvseinmninrwigrt 206 (401)
T 1xv5_A 132 VRRADVIFSHSDNGDFNKVLMKEWYP---ETVSLF-DDIEEAPTVYNFQPPM-DIVKVRSTYWKDVSEINMNINRWIGRT 206 (401)
T ss_dssp HHHCSEEEESCTTSHHHHTHHHHHSC---SSCCSS-SCCCCCCCEEECCCCB-CHHHHHHHHCCCGGGCEEEEEEEECCS
T ss_pred hhhhceEEecCCCCcHHHHHHHhhcc---chhhhh-cchhhCCceeccCCCc-eeeeeehhhhccHHHhhcchhhhhccc
Confidence 5789999988754 3334555543 111111 11110 0122211 11112222211111 10122378999
Q ss_pred ccccCHHHHHHHHHHhhhcCCCeE-EEEEeCCcchh--HHHHh-----------------c--CCeEEcCCCChhHHHHH
Q 044542 297 VRDKGHPLLYEAFSSITRDHPGVY-LLVAGTGPWGR--RYAEL-----------------G--QNVKVLGALEAHQLSEF 354 (465)
Q Consensus 297 ~~~Kg~~~ll~a~~~l~~~~~~~~-l~ivG~g~~~~--~~~~l-----------------~--~~V~~~g~v~~~~~~~~ 354 (465)
..+||+-.+.+--+++.+ |.-+ -++-|-..... .+++. + ....++.-.-..++.+-
T Consensus 207 ttwkgfyqmfdfhekflk--pagkstvmeglerspafiaikekgipyeyygnreidkmnlapnqpaqildcyinsemler 284 (401)
T 1xv5_A 207 TTWKGFYQMFDFHEKFLK--PAGKSTVMEGLERSPAFIAIKEKGIPYEYYGNREIDKMNLAPNQPAQILDCYINSEMLER 284 (401)
T ss_dssp CGGGCHHHHHHHHHHTTT--TTTCEEEEECCCCSHHHHHHHHTTCCEEEECGGGGGGCCCSSSCCEEEESCCCHHHHHHH
T ss_pred chhHhHHHHhhHHHHhcC--ccchhhhhhhhhcCCceEEEcccCCchhhcCcchhhhhcCCCCCcchhhhheecHHHHHH
Confidence 999999999887777655 3222 33344221111 12221 1 22334443335778888
Q ss_pred HHhcCeEEecccC-----CCCCcHHHHHHHHcCCeEEe-cC--------CCCcceeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542 355 YNALDVFVNPTLR-----PQGLDLTLIEAMHCGRTVLT-PN--------YPSIVRTVVVNEELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 355 ~~~aDv~v~ps~~-----~eg~~~~~~EAma~G~PvI~-s~--------~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~ 419 (465)
++.+-..-.-|.- ....-.+-+|--|||+-.+- -. +...+ +-.++..-+.++. |.++-.+.|.
T Consensus 285 msksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntp--ltshdsgiiwfdendmestferik 362 (401)
T 1xv5_A 285 MSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTP--LTSHDSGIIWFDENDMESTFERIK 362 (401)
T ss_dssp HHTEEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEHHHHHHSBCTTTCCB--GGGSCCSCEEECTTCHHHHHHHHH
T ss_pred hhhcCcccchHHHHHHHHHhhhhhheeecccccceeeeecccCcceEEEecCCc--ccccCCceEEecCCchHHHHHHHH
Confidence 8888777664421 13566789999999984443 21 11111 1122333345666 9999999999
Q ss_pred HHHhCChHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Q 044542 420 LVIRDGPKVLQRKGLACKEHALSMFTATKMASAYER 455 (465)
Q Consensus 420 ~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ 455 (465)
++-.+ +..+.+-+++++++.-++-+..-..+.-.+
T Consensus 363 elssd-ralydrerekayeflyqhqdssfcfkeqfd 397 (401)
T 1xv5_A 363 ELSSD-RALYDREREKAYEFLYQHQDSSFCFKEQFD 397 (401)
T ss_dssp HHHTC-HHHHHHHHHHHHHHHHHHHBHHHHHHHHHH
T ss_pred Hhccc-hhhhhHHHHHHHHHHHhcccccchhHhhcc
Confidence 99998 888888889999988776454444443333
No 68
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=91.23 E-value=0.69 Score=40.31 Aligned_cols=42 Identities=14% Similarity=0.152 Sum_probs=30.5
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH 128 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~ 128 (465)
+||||+.... |=...-+..|+++|++.| +|+|+++.......
T Consensus 1 ~M~ILlTNDD-------Gi~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~ 42 (251)
T 2phj_A 1 MPTFLLVNDD-------GYFSPGINALREALKSLG-RVVVVAPDRNLSGV 42 (251)
T ss_dssp -CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSCCTTS
T ss_pred CCEEEEECCC-------CCCCHHHHHHHHHHHhcC-CEEEEecCCCccCC
Confidence 3899988764 212334788999999998 99999998765443
No 69
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.20 E-value=3.6 Score=39.75 Aligned_cols=121 Identities=16% Similarity=0.192 Sum_probs=64.2
Q ss_pred ccCHHHHHHHHHHhhhcCCCeEEEEEeCCcch--------------------hHHHH----hcCCeEEcCCCChhHHHH-
Q 044542 299 DKGHPLLYEAFSSITRDHPGVYLLVAGTGPWG--------------------RRYAE----LGQNVKVLGALEAHQLSE- 353 (465)
Q Consensus 299 ~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~--------------------~~~~~----l~~~V~~~g~v~~~~~~~- 353 (465)
.+.++.+.+.+....+ +.-+++|+|.|.-. +..+. +.+-+.+.|.-.+.++..
T Consensus 218 ~~~i~~~~~~~g~~~~--~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~e 295 (461)
T 4g65_A 218 SNHIRSVMSELQRLEK--PYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTE 295 (461)
T ss_dssp TTTHHHHHHHTTGGGS--CCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHH
T ss_pred cchHHHHHHhhccccc--cccEEEEEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhh
Confidence 4667666666654432 33468888876321 22222 224556677775555444
Q ss_pred -HHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcc-eeeeeeCCceEEeCCCHHH-HHHHHHHHHh
Q 044542 354 -FYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIV-RTVVVNEELGYTFSPNVKS-FVEALELVIR 423 (465)
Q Consensus 354 -~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~-~e~v~~~~~G~l~~~d~~~-la~~i~~ll~ 423 (465)
=+..+|+++..+...|.-=++.+-|-.+|.+=+.+...... .+++...+...++. +.. .+..|.+.+.
T Consensus 296 e~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~vn~~~~~~l~~~~gid~vis--p~~~~a~~I~~~i~ 366 (461)
T 4g65_A 296 ENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRGAYVDLVQGGVIDVAIS--PQQATISALLTHVR 366 (461)
T ss_dssp TTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHCSSSSCEEEC--HHHHHHHHHHHHHH
T ss_pred cCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccccccccchhhhhhccccceeeC--HHHHHHHHHHHHhh
Confidence 45789999986643232224556677788876655443211 13333333344444 333 3445555444
No 70
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=86.36 E-value=1.1 Score=39.93 Aligned_cols=45 Identities=20% Similarity=0.317 Sum_probs=30.7
Q ss_pred CCCCceeEEEEeCCCCCCCCCChH-HHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 75 PTFEKLKLAVFSKTWPIGAAPGGM-ERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 75 ~~~~~mkIl~v~~~~p~~~~~gG~-~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+.+++||||+|... | ..++. .......++.|.+.||+|+++-...
T Consensus 18 ~~m~~MKiLII~aH-P---~~~S~n~aL~~~~~~~l~~~G~eV~v~DLy~ 63 (280)
T 4gi5_A 18 LYFQSMKVLLIYAH-P---EPRSLNGALKNFAIRHLQQAGHEVQVSDLYA 63 (280)
T ss_dssp ----CCEEEEEECC-S---CTTSHHHHHHHHHHHHHHHTTCEEEEEETTT
T ss_pred chhhCCeEEEEEeC-C---CCccHHHHHHHHHHHHHHHCCCeEEEEEccc
Confidence 35678999999875 3 34443 3455677889999999999987654
No 71
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=84.53 E-value=3.1 Score=36.39 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=28.3
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH 128 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~ 128 (465)
+|||+.... |=...-+..|+++|.+.| +|+|+++.......
T Consensus 2 p~ILlTNDD-------Gi~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~ 42 (251)
T 2wqk_A 2 PTFLLVNDD-------GYFSPGINALREALKSLG-RVVVVAPDRNLSGV 42 (251)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSCCTTS
T ss_pred CEEEEEcCC-------CCCcHHHHHHHHHHHhCC-CEEEEeeCCCCccc
Confidence 478877653 111234788999999998 69999988765443
No 72
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=82.69 E-value=1.3 Score=39.93 Aligned_cols=34 Identities=29% Similarity=0.470 Sum_probs=25.7
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|||++. ||.+-.=..|++.|.++||+|++++..+
T Consensus 1 MkILVT----------GatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVG----------GGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEE----------TTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEE----------CCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 898876 3333345678999999999999998653
No 73
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=81.70 E-value=3.7 Score=32.13 Aligned_cols=42 Identities=19% Similarity=0.086 Sum_probs=29.4
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
...||++++... |. .---...+..++..|.+.||+|+|....
T Consensus 4 ~~~m~~LilLGC-PE---~Pvq~p~~lYl~~~Lk~~G~~v~VA~np 45 (157)
T 1kjn_A 4 ESTGKALMVLGC-PE---SPVQIPLAIYTSHKLKKKGFRVTVTANP 45 (157)
T ss_dssp --CCEEEEECCC-SC---STTHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred ccceeeeEEecC-CC---CcchhhHHHHHHHHHHhcCCeeEEecCH
Confidence 456898888654 32 2223445778999999999999998754
No 74
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=80.59 E-value=4.4 Score=35.25 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=29.1
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKP 127 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~ 127 (465)
||||+.... |=...-+..|+++|++.| +|+|+++......
T Consensus 1 M~ILlTNDD-------Gi~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg 40 (247)
T 1j9j_A 1 MRILVTNDD-------GIQSKGIIVLAELLSEEH-EVFVVAPDKERSA 40 (247)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred CeEEEEcCC-------CCCcHhHHHHHHHHHhCC-CEEEEecCCCCcC
Confidence 788877654 112234788999999987 9999999875543
No 75
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=80.39 E-value=5.4 Score=34.80 Aligned_cols=51 Identities=14% Similarity=0.105 Sum_probs=35.6
Q ss_pred cccccCCCCCceeEEEEeCCCCCCCCCChHH-HHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 69 NKLCFGPTFEKLKLAVFSKTWPIGAAPGGME-RHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 69 ~~l~~~~~~~~mkIl~v~~~~p~~~~~gG~~-~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
..+...+.+.+|||++|..+ +..+|.. ..+..+++.+.+.|++|.++-...
T Consensus 24 ~~~~~~~~~~~mkIliI~GS----~r~~s~t~~La~~~~~~l~~~g~eve~idL~~ 75 (247)
T 2q62_A 24 ASLRPAFSTHRPRILILYGS----LRTVSYSRLLAEEARRLLEFFGAEVKVFDPSG 75 (247)
T ss_dssp GGGCCCCCCSCCEEEEEECC----CCSSCHHHHHHHHHHHHHHHTTCEEEECCCTT
T ss_pred hhhhhhccCCCCeEEEEEcc----CCCCCHHHHHHHHHHHHHhhCCCEEEEEEhhc
Confidence 34444556667899999986 2445544 556667888888899999887654
No 76
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=79.54 E-value=4 Score=31.46 Aligned_cols=42 Identities=26% Similarity=0.301 Sum_probs=32.3
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEE-EEEeCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEI-HVFTAPSD 124 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V-~v~~~~~~ 124 (465)
||++++...=|. ..-..+....++.++.+.||+| .|+...+.
T Consensus 1 mk~~iiv~~~p~---~~~~~~~al~~a~a~~~~g~~v~~vff~~dG 43 (130)
T 2hy5_A 1 MKFALQINEGPY---QHQASDSAYQFAKAALEKGHEIFRVFFYHDG 43 (130)
T ss_dssp CEEEEEECSCTT---TSTHHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred CEEEEEEeCCCC---CcHHHHHHHHHHHHHHhcCCeeCEEEEechH
Confidence 789999887432 2344567889999999999999 88887764
No 77
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=79.32 E-value=12 Score=27.94 Aligned_cols=43 Identities=12% Similarity=0.012 Sum_probs=29.3
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
..+++||+++|.. +.|-.......+-+.+.+.|.++.+-+...
T Consensus 18 ~~~~kkIlvvC~s-----G~gTS~ll~~kl~~~~~~~gi~~~V~~~~~ 60 (113)
T 1tvm_A 18 QGSKRKIIVACGG-----AVATSTMAAEEIKELCQSHNIPVELIQCRV 60 (113)
T ss_dssp SCSSEEEEEESCS-----CSSHHHHHHHHHHHHHHHTTCCEEEEEECT
T ss_pred cccccEEEEECCC-----CHHHHHHHHHHHHHHHHHcCCeEEEEEecH
Confidence 3345789999974 334333357888889999999876665443
No 78
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=79.19 E-value=6 Score=34.52 Aligned_cols=41 Identities=17% Similarity=0.250 Sum_probs=29.4
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKP 127 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~ 127 (465)
.||||+.... |=...-+..|+++|++.| +|+|+++.....-
T Consensus 1 ~M~ILlTNDD-------Gi~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg 41 (254)
T 2v4n_A 1 SMRILLSNDD-------GVHAPGIQTLAKALREFA-DVQVVAPDRNRSG 41 (254)
T ss_dssp CCEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred CCeEEEEcCC-------CCCCHHHHHHHHHHHhCC-cEEEEeeCCCCcC
Confidence 3799887664 112234788999998886 9999999875543
No 79
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=78.42 E-value=3.9 Score=32.23 Aligned_cols=39 Identities=28% Similarity=0.408 Sum_probs=31.9
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|||+++-.+ ..|..+..+..+++.|.+.|++|.++....
T Consensus 2 ~ki~I~y~S-----~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 2 SKVLIVFGS-----STGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp CEEEEEEEC-----SSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CeEEEEEEC-----CCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 588887653 458888999999999999999999987654
No 80
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=78.24 E-value=4.1 Score=33.96 Aligned_cols=40 Identities=20% Similarity=0.252 Sum_probs=32.3
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|||+++..+ ..|-.+..+..+++.+.+.|++|.++....
T Consensus 5 M~kilii~~S-----~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 44 (200)
T 2a5l_A 5 SPYILVLYYS-----RHGATAEMARQIARGVEQGGFEARVRTVPA 44 (200)
T ss_dssp CCEEEEEECC-----SSSHHHHHHHHHHHHHHHTTCEEEEEBCCC
T ss_pred cceEEEEEeC-----CCChHHHHHHHHHHHHhhCCCEEEEEEhhh
Confidence 4699999875 246777888899999999999999887654
No 81
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=76.85 E-value=5.3 Score=31.31 Aligned_cols=44 Identities=23% Similarity=0.247 Sum_probs=34.1
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEE-EEEeCCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEI-HVFTAPSD 124 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V-~v~~~~~~ 124 (465)
..||++++.+.=|. ..-..+....++.++.+.||+| .||...+.
T Consensus 11 ~~~~~~ivv~~~Py---g~~~a~~Al~~A~aala~g~eV~~VFf~~DG 55 (140)
T 2d1p_A 11 GSMRFAIVVTGPAY---GTQQASSAFQFAQALIADGHELSSVFFYREG 55 (140)
T ss_dssp CCCEEEEEECSCSS---SSSHHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred CceEEEEEEcCCCC---CcHHHHHHHHHHHHHHHCCCccCEEEEechH
Confidence 46899999987443 2344566789999999999999 88887764
No 82
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=75.89 E-value=4.8 Score=32.36 Aligned_cols=39 Identities=10% Similarity=0.141 Sum_probs=31.8
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|||+++-.+ ..|..+..+..+++.|.+.|++|.++....
T Consensus 1 Mkv~IvY~S-----~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 39 (161)
T 3hly_A 1 MSVLIGYLS-----DYGYSDRLSQAIGRGLVKTGVAVEMVDLRA 39 (161)
T ss_dssp -CEEEEECT-----TSTTHHHHHHHHHHHHHHTTCCEEEEETTT
T ss_pred CEEEEEEEC-----CChHHHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 788888654 468999999999999999999998886553
No 83
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=75.07 E-value=6.1 Score=29.36 Aligned_cols=40 Identities=13% Similarity=0.140 Sum_probs=27.2
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.++|||+++|.. ....+..+..+-++..++|.++.+.+..
T Consensus 4 ~~~mkIlL~C~a------GmSTsllv~km~~~a~~~gi~v~i~a~~ 43 (108)
T 3nbm_A 4 SKELKVLVLCAG------SGTSAQLANAINEGANLTEVRVIANSGA 43 (108)
T ss_dssp -CCEEEEEEESS------SSHHHHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred ccCceEEEECCC------CCCHHHHHHHHHHHHHHCCCceEEEEcc
Confidence 457899999973 1333445566667777789999997743
No 84
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=74.26 E-value=28 Score=26.85 Aligned_cols=77 Identities=10% Similarity=0.066 Sum_probs=48.2
Q ss_pred hhHHHHHHHh---cCeEEecccCCCCCcHHHHHHHH---cCCeEEecCCCCcce---eeeeeC-CceEEeCC-CHHHHHH
Q 044542 348 AHQLSEFYNA---LDVFVNPTLRPQGLDLTLIEAMH---CGRTVLTPNYPSIVR---TVVVNE-ELGYTFSP-NVKSFVE 416 (465)
Q Consensus 348 ~~~~~~~~~~---aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~s~~gg~~~---e~v~~~-~~G~l~~~-d~~~la~ 416 (465)
.++....+.. .|++++-..-++.-|..+++.+. ...|+|........+ +.+..+ ..+++..| +.++|.+
T Consensus 36 ~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~L~~ 115 (151)
T 3kcn_A 36 GPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQDLTTAMEAVNEGQVFRFLNKPCQMSDIKA 115 (151)
T ss_dssp HHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGGGHHHHHHHHHHTCCSEEEESSCCHHHHHH
T ss_pred HHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCCCHHHHHHHHHcCCeeEEEcCCCCHHHHHH
Confidence 3555555543 38887743333455667766654 367777532222111 233445 67899999 9999999
Q ss_pred HHHHHHhC
Q 044542 417 ALELVIRD 424 (465)
Q Consensus 417 ~i~~ll~~ 424 (465)
+|..++..
T Consensus 116 ~i~~~l~~ 123 (151)
T 3kcn_A 116 AINAGIKQ 123 (151)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999886
No 85
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=72.86 E-value=7.4 Score=32.73 Aligned_cols=41 Identities=22% Similarity=0.199 Sum_probs=33.1
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.+|||++|..+ ..|-.+..+..+++.+.+.|++|.++....
T Consensus 5 ~mmkilii~~S-----~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 45 (211)
T 1ydg_A 5 APVKLAIVFYS-----STGTGYAMAQEAAEAGRAAGAEVRLLKVRE 45 (211)
T ss_dssp CCCEEEEEECC-----SSSHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCCeEEEEEEC-----CCChHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence 35799999865 256777888899999999999999987665
No 86
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=69.76 E-value=6.2 Score=36.45 Aligned_cols=40 Identities=10% Similarity=0.119 Sum_probs=28.1
Q ss_pred CCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHh--CCcEEEEEeCCCC
Q 044542 75 PTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAA--RGHEIHVFTAPSD 124 (465)
Q Consensus 75 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~--~G~~V~v~~~~~~ 124 (465)
|.+..|+|++.. ..|+++. .+++.|.+ .|++|.++.....
T Consensus 6 ~~~~~~~vlVTG-------atG~IG~---~l~~~L~~~~~g~~V~~~~r~~~ 47 (362)
T 3sxp_A 6 DELENQTILITG-------GAGFVGS---NLAFHFQENHPKAKVVVLDKFRS 47 (362)
T ss_dssp CCCTTCEEEEET-------TTSHHHH---HHHHHHHHHCTTSEEEEEECCCC
T ss_pred hhcCCCEEEEEC-------CCCHHHH---HHHHHHHhhCCCCeEEEEECCCc
Confidence 345567777763 3366654 67888888 8999999986543
No 87
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=69.14 E-value=5.7 Score=31.12 Aligned_cols=38 Identities=26% Similarity=0.270 Sum_probs=30.2
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|||+++..+ ..|..+..+..+++.|.+.|++|.++...
T Consensus 1 mki~iiy~S-----~~Gnt~~~a~~i~~~l~~~g~~v~~~~~~ 38 (147)
T 1f4p_A 1 PKALIVYGS-----TTGNTEYTAETIARELADAGYEVDSRDAA 38 (147)
T ss_dssp CEEEEEEEC-----SSSHHHHHHHHHHHHHHHHTCEEEEEEGG
T ss_pred CeEEEEEEC-----CcCHHHHHHHHHHHHHHhcCCeeEEEehh
Confidence 688888653 45778888999999999889999887644
No 88
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=68.53 E-value=33 Score=25.94 Aligned_cols=77 Identities=10% Similarity=0.188 Sum_probs=50.0
Q ss_pred hhHHHHHHH----hcCeEEecccCCCCCcHHHHHHHHc---CCeEEec-CCCCc--ceeeeeeCCceEEeCC-CHHHHHH
Q 044542 348 AHQLSEFYN----ALDVFVNPTLRPQGLDLTLIEAMHC---GRTVLTP-NYPSI--VRTVVVNEELGYTFSP-NVKSFVE 416 (465)
Q Consensus 348 ~~~~~~~~~----~aDv~v~ps~~~eg~~~~~~EAma~---G~PvI~s-~~gg~--~~e~v~~~~~G~l~~~-d~~~la~ 416 (465)
.++....+. ..|++++-..-++.-|..+++.+.. .+|+|.. ..... ..+.+..|..+++..| +.++|..
T Consensus 36 ~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~ 115 (143)
T 3jte_A 36 STEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYLRKPVTAQDLSI 115 (143)
T ss_dssp HHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHH
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcceeEeCCCCHHHHHH
Confidence 355555555 4688887443335556677666543 6777753 32221 1123456778899999 9999999
Q ss_pred HHHHHHhC
Q 044542 417 ALELVIRD 424 (465)
Q Consensus 417 ~i~~ll~~ 424 (465)
+|.+++..
T Consensus 116 ~l~~~~~~ 123 (143)
T 3jte_A 116 AINNAINR 123 (143)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
No 89
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=68.51 E-value=4.9 Score=39.06 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=31.7
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+++|+++.. | ..|.-.-+..|++.|+++||+|++++...
T Consensus 8 ~~~vl~~p~--p----~~GHi~P~l~La~~L~~rG~~VT~v~t~~ 46 (482)
T 2pq6_A 8 KPHVVMIPY--P----VQGHINPLFKLAKLLHLRGFHITFVNTEY 46 (482)
T ss_dssp CCEEEEECC--S----SHHHHHHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred CCEEEEecC--c----cchhHHHHHHHHHHHHhCCCeEEEEeCCc
Confidence 568888863 2 36777889999999999999999998653
No 90
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=68.10 E-value=13 Score=30.48 Aligned_cols=40 Identities=18% Similarity=0.209 Sum_probs=32.3
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHh-CCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAA-RGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~~ 123 (465)
+|||+++..+ ..|..+..+..+++.+.+ .|++|.++....
T Consensus 4 M~kiliiy~S-----~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~ 44 (188)
T 2ark_A 4 MGKVLVIYDT-----RTGNTKKMAELVAEGARSLEGTEVRLKHVDE 44 (188)
T ss_dssp CEEEEEEECC-----SSSHHHHHHHHHHHHHHTSTTEEEEEEETTT
T ss_pred CCEEEEEEEC-----CCcHHHHHHHHHHHHHhhcCCCeEEEEEhhh
Confidence 4799999764 347778888999999998 899999887654
No 91
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=67.24 E-value=9.6 Score=32.68 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=31.0
Q ss_pred eeEEEEeCCCCCCCCCChH-HHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGM-ERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~-~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
|||++|..+ +..+|. ...+..+++.|.+.|++|.++-....
T Consensus 2 mkiLiI~gs----pr~~S~t~~l~~~~~~~l~~~g~ev~~~dL~~~ 43 (228)
T 3tem_A 2 KKVLIVYAH----QEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAM 43 (228)
T ss_dssp CEEEEEECC----SCTTSHHHHHHHHHHHHHHHHTCEEEEEETTTT
T ss_pred CEEEEEEeC----CCCCCHHHHHHHHHHHHHHHCCCEEEEEEhhhc
Confidence 799999876 344554 45667778888888999999987654
No 92
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=67.11 E-value=10 Score=33.43 Aligned_cols=35 Identities=23% Similarity=0.366 Sum_probs=26.0
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
+|||+++. . |+.+. .+++.|.+.||+|.++.....
T Consensus 3 ~~~ilVtG-------a-G~iG~---~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAG-------C-GDLGL---ELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEEC-------C-SHHHH---HHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEEC-------C-CHHHH---HHHHHHHHCCCEEEEEeCCcc
Confidence 57888763 1 65544 678889999999999987654
No 93
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=67.08 E-value=11 Score=31.19 Aligned_cols=40 Identities=23% Similarity=0.271 Sum_probs=32.4
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHh-CCcEEEEEeCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAA-RGHEIHVFTAPSD 124 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~~~ 124 (465)
|||+++..+ ..|-.+..+..+++.+.+ .|++|.++.....
T Consensus 2 mkilii~~S-----~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~ 42 (198)
T 3b6i_A 2 AKVLVLYYS-----MYGHIETMARAVAEGASKVDGAEVVVKRVPET 42 (198)
T ss_dssp CEEEEEECC-----SSSHHHHHHHHHHHHHHTSTTCEEEEEECCCC
T ss_pred CeEEEEEeC-----CCcHHHHHHHHHHHHHhhcCCCEEEEEEcccc
Confidence 699999765 346777888899999998 8999999987653
No 94
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=66.90 E-value=12 Score=28.92 Aligned_cols=43 Identities=12% Similarity=-0.023 Sum_probs=31.8
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
++|++|+...=| ...........++......||+|.+|...+.
T Consensus 15 ~~kl~ii~~sgP---~~~~~~~~al~lA~~A~a~g~eV~vFf~~dG 57 (134)
T 3mc3_A 15 XXXILIVVTHGP---EDLDRTYAPLFMASISASMEYETSVFFMIXG 57 (134)
T ss_dssp CCEEEEEECCCG---GGTHHHHHHHHHHHHHHHTTCEEEEEECTTG
T ss_pred cceEEEEEccCC---CCHHHHHHHHHHHHHHHHCCCCEEEEEEeCc
Confidence 468998887632 2244555677888888899999999988764
No 95
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=66.55 E-value=39 Score=25.46 Aligned_cols=76 Identities=14% Similarity=0.118 Sum_probs=45.7
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH--------cCCeEEecCCCCcceeeeeeCCceEEeCC-CHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH--------CGRTVLTPNYPSIVRTVVVNEELGYTFSP-NVKSFVEA 417 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma--------~G~PvI~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~ 417 (465)
++....+.. .|++++-..-++.-|..+++.+. ...|+|..............+..+++..| +.++|.++
T Consensus 44 ~~al~~l~~~~~dlvllD~~lp~~~g~~~~~~l~~~~~~~~~~~~~ii~~s~~~~~~~~~~~g~~~~l~KP~~~~~L~~~ 123 (140)
T 3c97_A 44 LQALQAYQNRQFDVIIMDIQMPVMDGLEAVSEIRNYERTHNTKRASIIAITADTIDDDRPGAELDEYVSKPLNPNQLRDV 123 (140)
T ss_dssp HHHHHHHHHSCCSEEEECTTCCSSCHHHHHHHHHHHHHHHTCCCCCCEEEESSCCSCCCCCSSCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHhhhhhcCCCceEEEEEeCccchhHHHhCChhheEeCCCCHHHHHHH
Confidence 455555443 58887743223344667777664 24566643222222133344557899999 99999999
Q ss_pred HHHHHhC
Q 044542 418 LELVIRD 424 (465)
Q Consensus 418 i~~ll~~ 424 (465)
|.+++..
T Consensus 124 i~~~~~~ 130 (140)
T 3c97_A 124 VLTCHSE 130 (140)
T ss_dssp HHHHHC-
T ss_pred HHHHhCC
Confidence 9988764
No 96
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=66.49 E-value=4.9 Score=34.61 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=27.5
Q ss_pred CCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeC
Q 044542 75 PTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTA 121 (465)
Q Consensus 75 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 121 (465)
|.+.+|||++|... ..|+ .|+..|++.||+|..+..
T Consensus 2 ~~~~~mkI~IIG~G-----~~G~------sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 2 MQAPRLRVGIFDDG-----SSTV------NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp -CCCCCEEEEECCS-----CCCS------CHHHHHHHTTCEEEECSS
T ss_pred CCCCCcEEEEEeeC-----HHHH------HHHHHHHHCCCEEEEecC
Confidence 44567999999864 4566 488999999999888765
No 97
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=65.88 E-value=28 Score=26.37 Aligned_cols=77 Identities=12% Similarity=0.040 Sum_probs=51.2
Q ss_pred hhHHHHHHHh-------cCeEEecccCCCCCcHHHHHHHHc-------CCeEEecCCCCcce---eeeeeC-CceEEeCC
Q 044542 348 AHQLSEFYNA-------LDVFVNPTLRPQGLDLTLIEAMHC-------GRTVLTPNYPSIVR---TVVVNE-ELGYTFSP 409 (465)
Q Consensus 348 ~~~~~~~~~~-------aDv~v~ps~~~eg~~~~~~EAma~-------G~PvI~s~~gg~~~---e~v~~~-~~G~l~~~ 409 (465)
.++....+.. .|++++-..-++.-|..+++.+.. ..|+|........+ +....+ ..+++..|
T Consensus 44 ~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~l~KP 123 (146)
T 3ilh_A 44 GNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSSSLDPRDQAKAEASDWVDYYVSKP 123 (146)
T ss_dssp HHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECSSCCHHHHHHHHHCSSCCEEECSS
T ss_pred HHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeCCCChHHHHHHHhcCCcceeeeCC
Confidence 3666666655 688887543345567778877654 56776543322221 223345 67899999
Q ss_pred -CHHHHHHHHHHHHhC
Q 044542 410 -NVKSFVEALELVIRD 424 (465)
Q Consensus 410 -d~~~la~~i~~ll~~ 424 (465)
+.++|.++|.+....
T Consensus 124 ~~~~~L~~~i~~~~~~ 139 (146)
T 3ilh_A 124 LTANALNNLYNKVLNE 139 (146)
T ss_dssp CCHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHh
Confidence 999999999999876
No 98
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=65.86 E-value=39 Score=25.19 Aligned_cols=77 Identities=6% Similarity=-0.036 Sum_probs=49.5
Q ss_pred hhHHHHHHHh---------cCeEEecccCCCCCcHHHHHHHH-----cCCeEEec-CCCCcc--eeeeeeCCceEEeCC-
Q 044542 348 AHQLSEFYNA---------LDVFVNPTLRPQGLDLTLIEAMH-----CGRTVLTP-NYPSIV--RTVVVNEELGYTFSP- 409 (465)
Q Consensus 348 ~~~~~~~~~~---------aDv~v~ps~~~eg~~~~~~EAma-----~G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~- 409 (465)
.++....+.. .|++++-...++.-|..+++.+. .++|+|.. ...... .+....|..+++..|
T Consensus 37 ~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~ 116 (140)
T 1k68_A 37 GMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSA 116 (140)
T ss_dssp HHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCCcHHHHHHHHHhchhheecCCC
Confidence 3666666653 68888743333445677777775 35677753 332211 123345678999999
Q ss_pred CHHHHHHHHHHHHhC
Q 044542 410 NVKSFVEALELVIRD 424 (465)
Q Consensus 410 d~~~la~~i~~ll~~ 424 (465)
+.+++.+.|.+++..
T Consensus 117 ~~~~l~~~i~~~~~~ 131 (140)
T 1k68_A 117 NLSQLFQIVKGIEEF 131 (140)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999988764
No 99
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=65.52 E-value=11 Score=28.06 Aligned_cols=42 Identities=14% Similarity=0.196 Sum_probs=31.2
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-Cc-EEEEEeCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GH-EIHVFTAPSD 124 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~-~V~v~~~~~~ 124 (465)
||++++...=|. ..........++.++.+. |+ +|.++...+.
T Consensus 2 ~k~~ii~~~~p~---~~~~~~~al~~a~~~~~~~g~~~v~vff~~dg 45 (117)
T 1jx7_A 2 QKIVIVANGAPY---GSESLFNSLRLAIALREQESNLDLRLFLMSDA 45 (117)
T ss_dssp CEEEEEECCCTT---TCSHHHHHHHHHHHHHHHCTTCEEEEEECGGG
T ss_pred cEEEEEEcCCCC---CcHHHHHHHHHHHHHHhcCCCccEEEEEEchH
Confidence 488888876442 233455678899999988 99 9999988764
No 100
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=65.36 E-value=9.9 Score=31.53 Aligned_cols=39 Identities=15% Similarity=0.159 Sum_probs=31.7
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|||++|..+ .|-.+..+..+++.+.+.|++|.++....
T Consensus 4 mmkilii~~S------~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 42 (199)
T 2zki_A 4 KPNILVLFYG------YGSIVELAKEIGKGAEEAGAEVKIRRVRE 42 (199)
T ss_dssp CCEEEEEECC------SSHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CcEEEEEEeC------ccHHHHHHHHHHHHHHhCCCEEEEEehhH
Confidence 4799999764 46677888889999988899999987655
No 101
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=65.05 E-value=6.5 Score=33.09 Aligned_cols=34 Identities=21% Similarity=0.449 Sum_probs=25.6
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|||+++. ..|++++ .+++.|.++|++|.++....
T Consensus 1 MkvlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIG-------ATGRAGS---RILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEc-------CCchhHH---HHHHHHHhCCCEEEEEEcCc
Confidence 7887764 3366654 67888999999999998754
No 102
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=64.98 E-value=5.5 Score=33.56 Aligned_cols=39 Identities=13% Similarity=0.068 Sum_probs=28.0
Q ss_pred ceeEEEEeCCCCCCCCCChHHHH--HHHHHHHHHhCCcEEEEEeCCCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERH--ASTLYHALAARGHEIHVFTAPSDR 125 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~--~~~l~~~L~~~G~~V~v~~~~~~~ 125 (465)
.+||++... ||...+ ...+++.|.+.|++|+++.+....
T Consensus 5 ~k~IllgiT--------Gsiaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 5 GKRIGFGFT--------GSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TCEEEEEEC--------SCGGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCEEEEEEE--------ChHHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 458887765 333444 689999999999999999887643
No 103
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=64.91 E-value=12 Score=31.06 Aligned_cols=42 Identities=10% Similarity=-0.007 Sum_probs=30.4
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHH-HHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHA-LAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~-L~~~G~~V~v~~~~~ 123 (465)
+|||+++..+. ...|-....+..+++. |.+.|++|.++....
T Consensus 2 Mmkilii~gS~---r~~g~t~~la~~i~~~~l~~~g~~v~~~dl~~ 44 (197)
T 2vzf_A 2 TYSIVAISGSP---SRNSTTAKLAEYALAHVLARSDSQGRHIHVID 44 (197)
T ss_dssp CEEEEEEECCS---STTCHHHHHHHHHHHHHHHHSSEEEEEEEGGG
T ss_pred CceEEEEECCC---CCCChHHHHHHHHHHHHHHHCCCeEEEEEccc
Confidence 47999998752 1234566677778888 888899999887543
No 104
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=64.49 E-value=21 Score=28.61 Aligned_cols=69 Identities=19% Similarity=0.058 Sum_probs=39.7
Q ss_pred HHHHhcCeEEecccCCCCCcHHHHH---HHHcCCeEEecCCC-----Ccce-------eeeee-------------CCce
Q 044542 353 EFYNALDVFVNPTLRPQGLDLTLIE---AMHCGRTVLTPNYP-----SIVR-------TVVVN-------------EELG 404 (465)
Q Consensus 353 ~~~~~aDv~v~ps~~~eg~~~~~~E---Ama~G~PvI~s~~g-----g~~~-------e~v~~-------------~~~G 404 (465)
..+..||++|.--.-.+.-+-+.+| |.+.|+||++-... +... ++.++ ..+|
T Consensus 65 ~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~~~D~R~~g~~~~~~~~~~~~~~e~~f~~~N~~~~G~i~~~g 144 (162)
T 3ehd_A 65 ENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYTDSRQQGADNHQKLDALNEIAENQFHYLNLYTVGLIKLNG 144 (162)
T ss_dssp HHHHTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEECCCGGGCCTTCHHHHHHTTSTTCCCSCCCCHHHHHHHHTTE
T ss_pred HHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEcCcccccCCcchhhhhhHHHhhhhhhhhhHHHhhhHHhCC
Confidence 4689999988732111222334444 78999999975322 1100 00000 1268
Q ss_pred EEeCCCHHHHHHHHHHHH
Q 044542 405 YTFSPNVKSFVEALELVI 422 (465)
Q Consensus 405 ~l~~~d~~~la~~i~~ll 422 (465)
.++. +.+++.++|.+.+
T Consensus 145 ~~~~-~~~~~~~~l~~~~ 161 (162)
T 3ehd_A 145 RVVS-SEEDLLEEIKQRL 161 (162)
T ss_dssp EEES-SHHHHHHHHHHTC
T ss_pred eEEe-CHHHHHHHHHHHh
Confidence 8886 7888888887653
No 105
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=63.98 E-value=6.9 Score=33.90 Aligned_cols=40 Identities=18% Similarity=0.229 Sum_probs=29.3
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKP 127 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~ 127 (465)
||||+.... |=...-+..|+++|++.| +|+|+++......
T Consensus 1 M~ILlTNDD-------Gi~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg 40 (244)
T 2e6c_A 1 MRILVTNDD-------GIYSPGLWALAEAASQFG-EVFVAAPDTEQSA 40 (244)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEECSSCCC
T ss_pred CeEEEEcCC-------CCCcHhHHHHHHHHHhCC-CEEEEecCCCCcC
Confidence 788877654 112234788999999988 9999999875543
No 106
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=63.50 E-value=8.7 Score=32.18 Aligned_cols=42 Identities=10% Similarity=0.063 Sum_probs=30.1
Q ss_pred CCceeEEEEeCCCCCCCCCChHHH-HHHHHHHHHHhCCcEEEEEeCCCCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMER-HASTLYHALAARGHEIHVFTAPSDR 125 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~-~~~~l~~~L~~~G~~V~v~~~~~~~ 125 (465)
.+.+||++-... +++.. ....+++.|.+.|++|+++.+....
T Consensus 5 l~~k~I~lgiTG-------s~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 5 FAGKHVGFGLTG-------SHCTYHEVLPQMERLVELGAKVTPFVTHTVQ 47 (201)
T ss_dssp CTTCEEEEECCS-------CGGGGGGTHHHHHHHHHTTCEEEEECSSCSC
T ss_pred cCCCEEEEEEEC-------hHHHHHHHHHHHHHHhhCCCEEEEEEChhHH
Confidence 344588876542 22223 4889999999999999999887643
No 107
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=63.43 E-value=4.9 Score=34.27 Aligned_cols=45 Identities=9% Similarity=-0.185 Sum_probs=26.8
Q ss_pred eccccccCCCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 67 SWNKLCFGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 67 ~~~~l~~~~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.|+.+..-+.+.+|||+++.. +..-..+++.|.+.|++|.++...
T Consensus 11 ~~~~~~~~~~m~mmkI~IIG~-----------G~mG~~la~~l~~~g~~V~~v~~r 55 (220)
T 4huj_A 11 VDLGTENLYFQSMTTYAIIGA-----------GAIGSALAERFTAAQIPAIIANSR 55 (220)
T ss_dssp ------CTTGGGSCCEEEEEC-----------HHHHHHHHHHHHHTTCCEEEECTT
T ss_pred ccccccchhhhcCCEEEEECC-----------CHHHHHHHHHHHhCCCEEEEEECC
Confidence 355544333345689999953 234457888999999999885443
No 108
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=62.98 E-value=47 Score=25.16 Aligned_cols=76 Identities=8% Similarity=0.103 Sum_probs=49.5
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHHc-----CCeEEe-cCCCCcc--eeeeeeCCceEEeCC-CHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMHC-----GRTVLT-PNYPSIV--RTVVVNEELGYTFSP-NVKSFVEA 417 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma~-----G~PvI~-s~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~ 417 (465)
++....+.. .|++++-..-++.-|..+++.+.. ++|||. +...... .+.+..+..+++..+ +.++|..+
T Consensus 42 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~ 121 (147)
T 2zay_A 42 IEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVNAIRLSAR 121 (147)
T ss_dssp HHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHH
Confidence 555555543 688887433234557788888764 567775 3332211 122445778999999 99999999
Q ss_pred HHHHHhC
Q 044542 418 LELVIRD 424 (465)
Q Consensus 418 i~~ll~~ 424 (465)
|..++..
T Consensus 122 i~~~~~~ 128 (147)
T 2zay_A 122 IKRVLKL 128 (147)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998875
No 109
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=62.91 E-value=32 Score=26.51 Aligned_cols=103 Identities=10% Similarity=0.071 Sum_probs=61.0
Q ss_pred eEEEEEeCCcch-----hHHHHhcC--CeEEcCCCChhHHHHHHH-----------hcCeEEecccCCCCCcHHHHHHHH
Q 044542 319 VYLLVAGTGPWG-----RRYAELGQ--NVKVLGALEAHQLSEFYN-----------ALDVFVNPTLRPQGLDLTLIEAMH 380 (465)
Q Consensus 319 ~~l~ivG~g~~~-----~~~~~l~~--~V~~~g~v~~~~~~~~~~-----------~aDv~v~ps~~~eg~~~~~~EAma 380 (465)
.+++|+.+.+.. ..+++.+. .|..... .++....+. ..|++++-..-++.-|..+++.+.
T Consensus 5 ~~ILivddd~~~~~~l~~~L~~~g~~~~v~~~~~--~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~lr 82 (152)
T 3heb_A 5 VTIVMIEDDLGHARLIEKNIRRAGVNNEIIAFTD--GTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLVK 82 (152)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCCCCEEEESS--HHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCCcceEEEeCC--HHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHHH
Confidence 456666654322 22233333 4444433 366666663 367888743333555778888776
Q ss_pred c-----CCeEEecCCCCcce---eeeeeCCceEEeCC-CHHHHHHHHHHHHh
Q 044542 381 C-----GRTVLTPNYPSIVR---TVVVNEELGYTFSP-NVKSFVEALELVIR 423 (465)
Q Consensus 381 ~-----G~PvI~s~~gg~~~---e~v~~~~~G~l~~~-d~~~la~~i~~ll~ 423 (465)
. ++|+|........+ +....|..+++..| +.++|.++|.++..
T Consensus 83 ~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 134 (152)
T 3heb_A 83 ENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVNYENFANAIRQLGL 134 (152)
T ss_dssp HSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred hcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 5 56777533222211 23455778999999 99999999998854
No 110
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=62.89 E-value=14 Score=32.08 Aligned_cols=46 Identities=22% Similarity=0.222 Sum_probs=31.0
Q ss_pred ceeEEEEeCCC-----CCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 79 KLKLAVFSKTW-----PIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 79 ~mkIl~v~~~~-----p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
++|||++.... ..+...|=-+.-+..-...|.+.|++|+++++...
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g~ 59 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETGT 59 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 34899997753 12212233344566778899999999999998653
No 111
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=62.89 E-value=7.2 Score=32.93 Aligned_cols=34 Identities=26% Similarity=0.431 Sum_probs=25.3
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|||+++. ..|++++ .+++.|.++|++|.++....
T Consensus 1 MkilVtG-------atG~iG~---~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MKIAVLG-------ATGRAGS---AIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEEc-------CCCHHHH---HHHHHHHHCCCEEEEEEecc
Confidence 7877763 3366654 67888999999999997653
No 112
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=62.40 E-value=7.2 Score=32.65 Aligned_cols=37 Identities=11% Similarity=0.152 Sum_probs=22.4
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEE
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIH 117 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~ 117 (465)
|.+|||++|..+ +..+|..+.+.+.+....+.|++|+
T Consensus 4 M~~mkIl~I~GS----~r~~s~t~~la~~~~~~~~~g~~v~ 40 (199)
T 4hs4_A 4 TSPLHFVTLLGS----LRKASFNAAVARALPEIAPEGIAIT 40 (199)
T ss_dssp -CCEEEEEEECC----CSTTCHHHHHHHHHHHHCCTTEEEE
T ss_pred CCCCEEEEEEcC----CCCCChHHHHHHHHHHHccCCCEEE
Confidence 457899999986 3456655544433333334578877
No 113
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=61.35 E-value=49 Score=24.83 Aligned_cols=76 Identities=12% Similarity=0.082 Sum_probs=47.6
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHHc-----CCeEEec-CCCCc--ceeeeeeCCceEEeCC-CHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMHC-----GRTVLTP-NYPSI--VRTVVVNEELGYTFSP-NVKSFVEA 417 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma~-----G~PvI~s-~~gg~--~~e~v~~~~~G~l~~~-d~~~la~~ 417 (465)
++....+.. .|++++-...++.-|..+++.+.. .+|||.. ..... ..+.+..+..+++..+ +.++|.+.
T Consensus 41 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~ 120 (142)
T 3cg4_A 41 GQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFDNEDLIEK 120 (142)
T ss_dssp HHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEECTTCCCCSSTTGGGGEEEEEESSCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEECCCCHHHHHHHHhcCccEEEeCCCCHHHHHHH
Confidence 555555544 577776432234456778887754 4677753 32211 1123445667889999 99999999
Q ss_pred HHHHHhC
Q 044542 418 LELVIRD 424 (465)
Q Consensus 418 i~~ll~~ 424 (465)
|..++..
T Consensus 121 i~~~~~~ 127 (142)
T 3cg4_A 121 TTFFMGF 127 (142)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988764
No 114
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=61.24 E-value=9.1 Score=31.65 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=25.2
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|+|+++. ..|+.+ ..+++.|.+.|++|.++....
T Consensus 4 ~~ilVtG-------atG~iG---~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFG-------ATGQTG---LTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEES-------TTSHHH---HHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEc-------CCcHHH---HHHHHHHHHCCCeEEEEEeCh
Confidence 6887763 236654 467888899999999988654
No 115
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=60.57 E-value=4 Score=33.46 Aligned_cols=68 Identities=10% Similarity=0.046 Sum_probs=42.1
Q ss_pred HHHhcCeEEecccCCCCCc--HHHHHHHHcCCeEEecCCCCcceeeeeeC-CceEEeCCCHHHHHHHHHHHHhC
Q 044542 354 FYNALDVFVNPTLRPQGLD--LTLIEAMHCGRTVLTPNYPSIVRTVVVNE-ELGYTFSPNVKSFVEALELVIRD 424 (465)
Q Consensus 354 ~~~~aDv~v~ps~~~eg~~--~~~~EAma~G~PvI~s~~gg~~~e~v~~~-~~G~l~~~d~~~la~~i~~ll~~ 424 (465)
+...||.+|.- +.|+| ..+.||+..++||++-+.-+..+..+.+. ...+.+..|++++.+.|.+.+..
T Consensus 104 m~~~sda~Ivl---pGg~GTL~E~~~al~~~kpV~~l~~~~~~~gfi~~~~~~~i~~~~~~~e~~~~l~~~~~~ 174 (176)
T 2iz6_A 104 NALSSNVLVAV---GMGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLAK 174 (176)
T ss_dssp CGGGCSEEEEE---SCCHHHHHHHHHHHHTTCCEEEESCCHHHHHHHHHHCTTTEEEESSHHHHHHHHHHHHHC
T ss_pred HHHhCCEEEEe---cCCccHHHHHHHHHHhCCcEEEEcCcccccccCChhhcCeEEEcCCHHHHHHHHHHHHHh
Confidence 34457877662 13444 46788899999999987633221122222 23444444999999998887754
No 116
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=60.55 E-value=17 Score=31.27 Aligned_cols=40 Identities=13% Similarity=0.119 Sum_probs=30.1
Q ss_pred eeEEEEeCCCCCCCCC-ChHHHHHHHHHHHHHhC-CcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAP-GGMERHASTLYHALAAR-GHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~-gG~~~~~~~l~~~L~~~-G~~V~v~~~~~ 123 (465)
|||++|..+ +.. |-....+..+++.|.+. |++|.++....
T Consensus 2 mkIliI~gS----~r~~s~T~~la~~i~~~l~~~~g~~v~~~dl~~ 43 (242)
T 1sqs_A 2 NKIFIYAGV----RNHNSKTLEYTKRLSSIISSRNNVDISFRTPFN 43 (242)
T ss_dssp CEEEEEECC----CCTTCHHHHHHHHHHHHHHHHSCCEEEEECTTT
T ss_pred CeEEEEECC----CCCCChHHHHHHHHHHHHHHhcCCeEEEEEccc
Confidence 799999876 233 45566677788888887 99999986654
No 117
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=60.08 E-value=8.7 Score=34.04 Aligned_cols=40 Identities=20% Similarity=0.301 Sum_probs=29.2
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKP 127 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~ 127 (465)
||||+.... |=...-+..|+++|++.| +|+|+++......
T Consensus 1 M~ILlTNDD-------Gi~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg 40 (280)
T 1l5x_A 1 MKILVTNDD-------GVHSPGLRLLYQFALSLG-DVDVVAPESPKSA 40 (280)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHGGGS-EEEEEEESSCTTT
T ss_pred CeEEEEcCC-------CCCcHhHHHHHHHHHhCC-CEEEEecCCCCcC
Confidence 798877654 112234788999999988 9999999875543
No 118
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=60.05 E-value=52 Score=24.66 Aligned_cols=76 Identities=12% Similarity=0.042 Sum_probs=49.5
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHHc-----CCeEEecCCCCcce----eeeeeCCceEEeCC-CHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMHC-----GRTVLTPNYPSIVR----TVVVNEELGYTFSP-NVKSFVE 416 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma~-----G~PvI~s~~gg~~~----e~v~~~~~G~l~~~-d~~~la~ 416 (465)
++....+.. .|++++-..-++.-|..+++.+.. .+|+|........+ +....+..+++..| +.++|..
T Consensus 40 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~ 119 (140)
T 3grc_A 40 AQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWLEKPIDENLLIL 119 (140)
T ss_dssp HHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEECSSCCHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEEeCCCCHHHHHH
Confidence 444444433 577777433335567788887765 67887644322111 22344667899999 9999999
Q ss_pred HHHHHHhC
Q 044542 417 ALELVIRD 424 (465)
Q Consensus 417 ~i~~ll~~ 424 (465)
+|.++++.
T Consensus 120 ~i~~~l~~ 127 (140)
T 3grc_A 120 SLHRAIDN 127 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999875
No 119
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=59.90 E-value=17 Score=31.43 Aligned_cols=46 Identities=11% Similarity=0.192 Sum_probs=30.8
Q ss_pred ceeEEEEeCCC-----CCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 79 KLKLAVFSKTW-----PIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 79 ~mkIl~v~~~~-----p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
++|||+|..+. ..+...|=-..-+..-...|.+.|++|+++++...
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g~ 53 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGG 53 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSSC
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 35899998753 11212233334566778889999999999998753
No 120
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=59.82 E-value=10 Score=32.25 Aligned_cols=46 Identities=13% Similarity=0.158 Sum_probs=28.9
Q ss_pred CCCceeEEEEeCCCCCCC-CCChHHH-HHHHHHHHHHhCCcEEEEEeCC
Q 044542 76 TFEKLKLAVFSKTWPIGA-APGGMER-HASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~-~~gG~~~-~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+..+|||++|... |... ..++... .+..+.+.+.+.|++|.++...
T Consensus 22 ~~~M~kiLiI~gs-p~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL~ 69 (218)
T 3rpe_A 22 SNAMSNVLIINAM-KEFAHSKGALNLTLTNVAADFLRESGHQVKITTVD 69 (218)
T ss_dssp --CCCCEEEEECC-CCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEGG
T ss_pred cccCcceEEEEeC-CCcccCCChHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 3445799999875 2100 1345544 4456677777889999998765
No 121
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=59.39 E-value=24 Score=28.08 Aligned_cols=39 Identities=18% Similarity=0.283 Sum_probs=32.1
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.||+++-.+ ..|..+..+..+++.|.+.|++|.++....
T Consensus 5 ~kv~IvY~S-----~~GnT~~iA~~ia~~l~~~g~~v~~~~~~~ 43 (159)
T 3fni_A 5 TSIGVFYVS-----EYGYSDRLAQAIINGITKTGVGVDVVDLGA 43 (159)
T ss_dssp CEEEEEECT-----TSTTHHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CEEEEEEEC-----CChHHHHHHHHHHHHHHHCCCeEEEEECcC
Confidence 478887653 469999999999999999999999887654
No 122
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=58.73 E-value=41 Score=26.10 Aligned_cols=66 Identities=9% Similarity=0.132 Sum_probs=41.5
Q ss_pred cCeEEecccCCCCCcHHHHHHHH---cCCeEEecCCCCcce---eeeeeCCceEEeCC-CHHHHHHHHHHHHh
Q 044542 358 LDVFVNPTLRPQGLDLTLIEAMH---CGRTVLTPNYPSIVR---TVVVNEELGYTFSP-NVKSFVEALELVIR 423 (465)
Q Consensus 358 aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~s~~gg~~~---e~v~~~~~G~l~~~-d~~~la~~i~~ll~ 423 (465)
.|++++-..-++.-|..+++.+. ..+|||........+ +.+..+..+++..+ +.++|.++|.+++.
T Consensus 84 ~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~ 156 (157)
T 3hzh_A 84 IDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTFIVKPLDRAKVLQRVMSVFV 156 (157)
T ss_dssp CCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHTTC
T ss_pred CCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHhc
Confidence 47777743333445666666654 356777533222111 23445678899999 99999999988754
No 123
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=58.67 E-value=4.6 Score=33.69 Aligned_cols=40 Identities=8% Similarity=-0.045 Sum_probs=28.7
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|||++|... |..++ ......+++++.+.|++|.++....
T Consensus 1 MmkiLiI~gs----p~~~~-s~l~~~l~~~~~~~g~ev~~~dL~~ 40 (192)
T 3f2v_A 1 MPKTLIILAH----PNISQ-STVHKHWSDAVRQHTDRFTVHELYA 40 (192)
T ss_dssp -CCEEEEECC----TTGGG-CSHHHHHHHHHTTCTTTEEEEEHHH
T ss_pred CCEEEEEEeC----CCccH-HHHHHHHHHHHHhCCCeEEEEEchh
Confidence 3799999875 23333 3677788888888899888887653
No 124
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=58.25 E-value=17 Score=30.07 Aligned_cols=40 Identities=13% Similarity=0.080 Sum_probs=29.8
Q ss_pred eeEEEEeCCCCCCCC--CChHHHHHHHHHHHHHhCC--cEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAA--PGGMERHASTLYHALAARG--HEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~--~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~ 123 (465)
|||++|..+ +. .|-....+..+++.+.+.| ++|.++....
T Consensus 2 mkilii~~S----~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~~ 45 (201)
T 1t5b_A 2 SKVLVLKSS----ILAGYSQSGQLTDYFIEQWREKHVADEITVRDLAA 45 (201)
T ss_dssp CEEEEEECC----SSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETTT
T ss_pred CeEEEEEeC----CCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccC
Confidence 799999876 23 2555667777888888876 8998887664
No 125
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=58.24 E-value=6.5 Score=32.77 Aligned_cols=68 Identities=13% Similarity=0.113 Sum_probs=41.7
Q ss_pred HHHHHHhcCeEEecccCCCCCc--HHHHHHHHcCCeEEecCCCCcceee----eeeC-------CceEEeCCCHHHHHHH
Q 044542 351 LSEFYNALDVFVNPTLRPQGLD--LTLIEAMHCGRTVLTPNYPSIVRTV----VVNE-------ELGYTFSPNVKSFVEA 417 (465)
Q Consensus 351 ~~~~~~~aDv~v~ps~~~eg~~--~~~~EAma~G~PvI~s~~gg~~~e~----v~~~-------~~G~l~~~d~~~la~~ 417 (465)
-.-+...||++|.- +.|+| ..+.||+..|+||++-+..+.-.+. +.++ ...+.+..|++++.+.
T Consensus 112 k~~m~~~sda~Ivl---pGG~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~~~~~i~~~~~~ee~~~~ 188 (195)
T 1rcu_A 112 SFVLLRNADVVVSI---GGEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAVQI 188 (195)
T ss_dssp HHHHHTTCSEEEEE---SCCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHHHHHH
T ss_pred HHHHHHhCCEEEEe---cCCCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCHHHcCeEEEeCCHHHHHHH
Confidence 33455678988763 23445 4678899999999998754433111 1111 1224444489998888
Q ss_pred HHHH
Q 044542 418 LELV 421 (465)
Q Consensus 418 i~~l 421 (465)
|.++
T Consensus 189 l~~~ 192 (195)
T 1rcu_A 189 IEQI 192 (195)
T ss_dssp HHTC
T ss_pred HHHH
Confidence 7653
No 126
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=58.21 E-value=55 Score=24.38 Aligned_cols=76 Identities=14% Similarity=0.103 Sum_probs=49.6
Q ss_pred hHHHHHHH--hcCeEEecccCCCCCcHHHHHHHHc---CCeEEecCCCCcc---eeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542 349 HQLSEFYN--ALDVFVNPTLRPQGLDLTLIEAMHC---GRTVLTPNYPSIV---RTVVVNEELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 349 ~~~~~~~~--~aDv~v~ps~~~eg~~~~~~EAma~---G~PvI~s~~gg~~---~e~v~~~~~G~l~~~-d~~~la~~i~ 419 (465)
++....+. ..|++++-..-++.-|..+++.+.. ..|+|........ .+.+..|..+++..| +.++|.++|.
T Consensus 41 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~ 120 (137)
T 3hdg_A 41 EEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGVHLFLPKPIEPGRLMETLE 120 (137)
T ss_dssp HHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCCSEECCSSCCHHHHHHHHH
T ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecCcChHHHHHHHhCCcceeEcCCCCHHHHHHHHH
Confidence 55555554 3688887443335556777776653 5777764332221 123455778899999 9999999999
Q ss_pred HHHhC
Q 044542 420 LVIRD 424 (465)
Q Consensus 420 ~ll~~ 424 (465)
++++.
T Consensus 121 ~~~~~ 125 (137)
T 3hdg_A 121 DFRHI 125 (137)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
No 127
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=58.13 E-value=7.7 Score=34.88 Aligned_cols=36 Identities=25% Similarity=0.313 Sum_probs=25.7
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
+|||+++. ..|+.+. .+++.|.+.||+|.++.....
T Consensus 7 ~~~vlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITG-------GAGFIGG---HLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEET-------TTSHHHH---HHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEEC-------CCChHHH---HHHHHHHHCCCEEEEEecCCc
Confidence 56777763 2355544 688889999999999876554
No 128
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=58.07 E-value=11 Score=31.95 Aligned_cols=36 Identities=22% Similarity=0.338 Sum_probs=25.6
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
+|||+++. ..|+. =..+++.|.+.|++|+++.....
T Consensus 4 m~~ilItG-------atG~i---G~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 4 VKKIVLIG-------ASGFV---GSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CCEEEEET-------CCHHH---HHHHHHHHHTTTCEEEEECSCGG
T ss_pred CCEEEEEc-------CCchH---HHHHHHHHHHCCCEEEEEEcCcc
Confidence 36777663 22444 45788999999999999987643
No 129
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=58.00 E-value=8.6 Score=32.40 Aligned_cols=35 Identities=14% Similarity=0.292 Sum_probs=26.5
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
|||+++. ..|+.++ .+++.|.+.|++|.++.....
T Consensus 1 M~ilItG-------atG~iG~---~l~~~L~~~g~~V~~~~R~~~ 35 (219)
T 3dqp_A 1 MKIFIVG-------STGRVGK---SLLKSLSTTDYQIYAGARKVE 35 (219)
T ss_dssp CEEEEES-------TTSHHHH---HHHHHHTTSSCEEEEEESSGG
T ss_pred CeEEEEC-------CCCHHHH---HHHHHHHHCCCEEEEEECCcc
Confidence 6888764 3366654 688899999999999987653
No 130
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=57.81 E-value=12 Score=27.76 Aligned_cols=40 Identities=0% Similarity=-0.025 Sum_probs=27.6
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+.|||+++|.. +.|-. ..+..+-+.+.+.|.++.+-+...
T Consensus 3 ~~mkIlvvC~~-----G~~TS-ll~~kl~~~~~~~gi~~~i~~~~~ 42 (109)
T 2l2q_A 3 GSMNILLVCGA-----GMSTS-MLVQRIEKYAKSKNINATIEAIAE 42 (109)
T ss_dssp CCEEEEEESSS-----SCSSC-HHHHHHHHHHHHHTCSEEEEEECS
T ss_pred CceEEEEECCC-----hHhHH-HHHHHHHHHHHHCCCCeEEEEecH
Confidence 45899999874 33332 566788888888898776655443
No 131
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=57.67 E-value=14 Score=34.22 Aligned_cols=37 Identities=22% Similarity=0.281 Sum_probs=25.8
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
.+|+|++.. ..|+++. .+++.|.+.||+|.++.....
T Consensus 28 ~~~~vlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r~~~ 64 (379)
T 2c5a_A 28 ENLKISITG-------AGGFIAS---HIARRLKHEGHYVIASDWKKN 64 (379)
T ss_dssp SCCEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEESSCC
T ss_pred cCCeEEEEC-------CccHHHH---HHHHHHHHCCCeEEEEECCCc
Confidence 456777663 2366544 677888899999999876543
No 132
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=57.32 E-value=10 Score=33.54 Aligned_cols=59 Identities=17% Similarity=0.206 Sum_probs=38.6
Q ss_pred hHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeee---e--eCCceEEeCC
Q 044542 349 HQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVV---V--NEELGYTFSP 409 (465)
Q Consensus 349 ~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v---~--~~~~G~l~~~ 409 (465)
+++.+++..+|++|--+. ++..--.+..++..|+|+|...+|-.. +.. . ..+.+.++.+
T Consensus 65 ~dl~~ll~~~DVVIDfT~-p~a~~~~~~~al~~G~~vVigTTG~s~-~~~~~L~~aa~~~~vv~a~ 128 (272)
T 4f3y_A 65 DDIERVCAEADYLIDFTL-PEGTLVHLDAALRHDVKLVIGTTGFSE-PQKAQLRAAGEKIALVFSA 128 (272)
T ss_dssp CCHHHHHHHCSEEEECSC-HHHHHHHHHHHHHHTCEEEECCCCCCH-HHHHHHHHHTTTSEEEECS
T ss_pred CCHHHHhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEEEECCCCCH-HHHHHHHHHhccCCEEEEC
Confidence 567778889999997553 244334566789999999987776433 211 1 1245667766
No 133
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=57.31 E-value=14 Score=30.74 Aligned_cols=37 Identities=27% Similarity=0.231 Sum_probs=27.9
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-CcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~ 123 (465)
|||++-... . .| ......+++.|.+. |++|+++.+..
T Consensus 1 ~~IllgvTG-----s-ia-a~k~~~ll~~L~~~~g~~V~vv~T~~ 38 (197)
T 1sbz_A 1 MKLIVGMTG-----A-TG-APLGVALLQALREMPNVETHLVMSKW 38 (197)
T ss_dssp CEEEEEECS-----S-SC-HHHHHHHHHHHHTCTTCEEEEEECHH
T ss_pred CEEEEEEeC-----h-HH-HHHHHHHHHHHHhccCCEEEEEECch
Confidence 688777653 1 23 34688999999999 99999998654
No 134
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=56.42 E-value=15 Score=30.61 Aligned_cols=39 Identities=18% Similarity=0.172 Sum_probs=28.7
Q ss_pred eeEEEEeCCCCCCCCC---ChHHHHHHHHHHHHHhCC--cEEEEEeCC
Q 044542 80 LKLAVFSKTWPIGAAP---GGMERHASTLYHALAARG--HEIHVFTAP 122 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~---gG~~~~~~~l~~~L~~~G--~~V~v~~~~ 122 (465)
|||++|..+ +.. |-....+..+++.+.+.| ++|.++...
T Consensus 2 ~kilii~gS----~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL~ 45 (208)
T 2hpv_A 2 SKLLVVKAH----PLTKEESRSVRALETFLASYRETNPSDEIEILDVY 45 (208)
T ss_dssp CEEEEEECC----SSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEETT
T ss_pred CeEEEEEec----CCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeCC
Confidence 699999876 342 444556677888888877 999988765
No 135
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=56.34 E-value=14 Score=28.23 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=23.7
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.|||+++.. |.. -..+++.|.+.|++|.++...
T Consensus 4 ~m~i~IiG~--------G~i---G~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI--------GRV---GYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC--------SHH---HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC--------CHH---HHHHHHHHHhCCCeEEEEECC
Confidence 479988832 433 446788899999999998754
No 136
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=56.27 E-value=66 Score=24.66 Aligned_cols=67 Identities=7% Similarity=0.083 Sum_probs=42.4
Q ss_pred cCeEEecccCCCCCcHHHHHHHH---cCCeEEecCCCCcc---eeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 358 LDVFVNPTLRPQGLDLTLIEAMH---CGRTVLTPNYPSIV---RTVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 358 aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~s~~gg~~---~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
.|++++-..-++.-|..+++.+. .++|+|........ .+.+..|..+++..| +.++|...|..++..
T Consensus 48 ~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 48 AGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEK 121 (155)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCChHHHHHHHhcCCCeEEeCCCCHHHHHHHHHHHHHH
Confidence 57777643223444666666654 36787754222211 123445678899999 999999999998875
No 137
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=56.17 E-value=17 Score=30.64 Aligned_cols=37 Identities=11% Similarity=0.183 Sum_probs=27.7
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+||++-... +-+......+++.|.+.|++|+++.+..
T Consensus 5 k~IllgvTG-------aiaa~k~~~ll~~L~~~g~eV~vv~T~~ 41 (209)
T 3zqu_A 5 ERITLAMTG-------ASGAQYGLRLLDCLVQEEREVHFLISKA 41 (209)
T ss_dssp SEEEEEECS-------SSCHHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred CEEEEEEEC-------HHHHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 478776653 2224558899999999999999998764
No 138
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=56.16 E-value=11 Score=29.54 Aligned_cols=36 Identities=22% Similarity=0.313 Sum_probs=29.0
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEe
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT 120 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 120 (465)
|||+++-. ...|..+..+..+++.|.+.|++|.++.
T Consensus 2 ~ki~I~Y~-----S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 2 ADITLISG-----STLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp CSEEEECC-----TTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEEEE-----CCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 57777743 3568889999999999999999988763
No 139
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=56.04 E-value=15 Score=32.01 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=30.2
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.++|||+.|+.. ...-|-...+.+|+.+|++.|++|.++-.+.
T Consensus 3 ~~~~~vI~v~s~----kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 3 RAKVRRIALANQ----KGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp --CCCEEEECCS----SCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCEEEEEEeC----CCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 456787777653 1222445678899999999999999997765
No 140
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=56.04 E-value=11 Score=32.37 Aligned_cols=27 Identities=19% Similarity=0.326 Sum_probs=20.8
Q ss_pred CChHHHHHHHHHHHHHhCC-cEEEEEeCCCC
Q 044542 95 PGGMERHASTLYHALAARG-HEIHVFTAPSD 124 (465)
Q Consensus 95 ~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~ 124 (465)
.||+++ .+++.|.+.| ++|.++.....
T Consensus 32 tG~iG~---~l~~~L~~~G~~~V~~~~R~~~ 59 (236)
T 3qvo_A 32 GGQIAR---HVINQLADKQTIKQTLFARQPA 59 (236)
T ss_dssp TSHHHH---HHHHHHTTCTTEEEEEEESSGG
T ss_pred CcHHHH---HHHHHHHhCCCceEEEEEcChh
Confidence 467655 6788999999 99999886543
No 141
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=56.01 E-value=11 Score=32.05 Aligned_cols=37 Identities=27% Similarity=0.459 Sum_probs=26.3
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.+.|||++.. ..||.++ .+++.|.++|++|.++....
T Consensus 19 l~~~~ilVtG-------atG~iG~---~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 19 FQGMRVLVVG-------ANGKVAR---YLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp --CCEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEESSG
T ss_pred cCCCeEEEEC-------CCChHHH---HHHHHHHhCCCeEEEEECCh
Confidence 3456887764 3367655 67888999999999998654
No 142
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=55.90 E-value=26 Score=31.01 Aligned_cols=43 Identities=9% Similarity=0.133 Sum_probs=31.8
Q ss_pred CCceeEEEEeCCCCCCCCCChHH-HHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGME-RHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~-~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
..+|||++|..+ +..+|.. ..+..+++.+.+.|++|.++-...
T Consensus 56 ~~~mKILiI~GS----~R~~S~T~~La~~~~~~l~~~G~eveiidL~d 99 (279)
T 2fzv_A 56 APPVRILLLYGS----LRARSFSRLAVEEAARLLQFFGAETRIFDPSD 99 (279)
T ss_dssp CSCCEEEEEESC----CSSSCHHHHHHHHHHHHHHHTTCEEEEBCCTT
T ss_pred CCCCEEEEEEeC----CCCCCHHHHHHHHHHHHHhhCCCEEEEEehhc
Confidence 457899999986 3445554 556667888888899999987654
No 143
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=55.88 E-value=57 Score=23.83 Aligned_cols=75 Identities=12% Similarity=0.105 Sum_probs=46.8
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH-----cCCeEEe-cCCCCcc--eeeeeeCCceEEeCC-CHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH-----CGRTVLT-PNYPSIV--RTVVVNEELGYTFSP-NVKSFVEA 417 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma-----~G~PvI~-s~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~ 417 (465)
++..+.+.. .|++++-..-++.-|..+++.+. ...|+|. |..+... ......|..+++..| +.+++.++
T Consensus 36 ~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~ 115 (122)
T 3gl9_A 36 QIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPFSPSQFIEE 115 (122)
T ss_dssp HHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhccCCCCHHHHHHH
Confidence 444444432 57777643334555778888774 3578775 3332211 122345778999999 99999999
Q ss_pred HHHHHh
Q 044542 418 LELVIR 423 (465)
Q Consensus 418 i~~ll~ 423 (465)
+.+++.
T Consensus 116 i~~~l~ 121 (122)
T 3gl9_A 116 VKHLLN 121 (122)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 998864
No 144
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=55.71 E-value=20 Score=26.41 Aligned_cols=41 Identities=15% Similarity=0.112 Sum_probs=30.2
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
+++||+++|.. +. |.+..+..+-+.+.++|.++.+......
T Consensus 2 ~mkkIll~Cg~-----G~-sTS~l~~k~~~~~~~~gi~~~i~a~~~~ 42 (106)
T 1e2b_A 2 EKKHIYLFSSA-----GM-STSLLVSKMRAQAEKYEVPVIIEAFPET 42 (106)
T ss_dssp CCEEEEEECSS-----ST-TTHHHHHHHHHHHHHSCCSEEEEEECSS
T ss_pred CCcEEEEECCC-----ch-hHHHHHHHHHHHHHHCCCCeEEEEecHH
Confidence 35789999974 22 3346777888899999999887776654
No 145
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=55.46 E-value=6.6 Score=32.70 Aligned_cols=41 Identities=15% Similarity=0.233 Sum_probs=23.8
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEE-EEeCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIH-VFTAP 122 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~-v~~~~ 122 (465)
++|||++|..+ +..++....+.+.+..+.+.|++|+ ++...
T Consensus 3 ~~mkil~I~GS----~r~~s~t~~l~~~~~~~~~~g~~v~~~idL~ 44 (193)
T 3svl_A 3 EKLQVVTLLGS----LRKGSFNGMVARTLPKIAPASMEVNALPSIA 44 (193)
T ss_dssp -CEEEEEEECC----CSTTCHHHHHHHHGGGTSCTTEEEEECCCST
T ss_pred CCCEEEEEEcc----CCCCCHHHHHHHHHHHHccCCCEEEEEEeHH
Confidence 46999999986 3556654443333333334578877 54433
No 146
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=55.35 E-value=21 Score=29.46 Aligned_cols=40 Identities=20% Similarity=0.276 Sum_probs=30.9
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|||+.|+.. ...-|-...+.+|+..|++.|.+|.++-.+.
T Consensus 1 M~vi~v~s~----kgG~GKTt~a~~la~~la~~g~~vlliD~D~ 40 (206)
T 4dzz_A 1 MKVISFLNP----KGGSGKTTAVINIATALSRSGYNIAVVDTDP 40 (206)
T ss_dssp CEEEEECCS----STTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEEeC----CCCccHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 677777653 2445667789999999999999999997663
No 147
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=55.28 E-value=18 Score=28.20 Aligned_cols=37 Identities=14% Similarity=0.162 Sum_probs=24.4
Q ss_pred CCCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEe
Q 044542 74 GPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT 120 (465)
Q Consensus 74 ~~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 120 (465)
+|+.+++||+++... ......+.+.|.+.|++|..+.
T Consensus 2 ~~~~~~~~ILivdd~----------~~~~~~l~~~L~~~g~~v~~~~ 38 (154)
T 3gt7_A 2 SLSNRAGEILIVEDS----------PTQAEHLKHILEETGYQTEHVR 38 (154)
T ss_dssp -----CCEEEEECSC----------HHHHHHHHHHHHTTTCEEEEES
T ss_pred CcccCCCcEEEEeCC----------HHHHHHHHHHHHHCCCEEEEeC
Confidence 345567899999765 4456678888888899886554
No 148
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=55.25 E-value=27 Score=30.77 Aligned_cols=42 Identities=10% Similarity=-0.013 Sum_probs=30.3
Q ss_pred ceeEEEEeCCCCCCCCCChH-HHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGM-ERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~-~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
+||||+|..+ +..+|. ...+..+++.|.+.|++|.++.....
T Consensus 2 MmkiLiI~gS----pr~~s~t~~la~~~~~~l~~~g~eV~~~dL~~~ 44 (273)
T 1d4a_A 2 GRRALIVLAH----SERTSFNYAMKEAAAAALKKKGWEVVESDLYAM 44 (273)
T ss_dssp CCEEEEEECC----SCTTSHHHHHHHHHHHHHHHTTCEEEEEETTTT
T ss_pred CCEEEEEEeC----CCCccHHHHHHHHHHHHHHhCCCeEEEEEcccc
Confidence 4799999876 233444 34566677788888999999887654
No 149
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=55.06 E-value=61 Score=23.91 Aligned_cols=76 Identities=11% Similarity=-0.037 Sum_probs=47.7
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHHc-----CCeEEecCCCCcc--eeeeeeCCceEEeCC-CHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMHC-----GRTVLTPNYPSIV--RTVVVNEELGYTFSP-NVKSFVEAL 418 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma~-----G~PvI~s~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i 418 (465)
++....+.. .|++++-..-++.-|..+++.+.. ++|+|........ .+....+..+++..| +.++|.++|
T Consensus 37 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i 116 (133)
T 3nhm_A 37 ASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKPVKPPVLIAQL 116 (133)
T ss_dssp HHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESSCCHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEeccCCHHHHHHHH
Confidence 444444433 577777433334556777777754 6787753221111 123445667899999 999999999
Q ss_pred HHHHhC
Q 044542 419 ELVIRD 424 (465)
Q Consensus 419 ~~ll~~ 424 (465)
.+++..
T Consensus 117 ~~~l~~ 122 (133)
T 3nhm_A 117 HALLAR 122 (133)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999875
No 150
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=54.98 E-value=23 Score=29.31 Aligned_cols=40 Identities=10% Similarity=0.261 Sum_probs=27.2
Q ss_pred eeEEEEeCCCCCCCCCChH-HHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGM-ERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~-~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
|||++|..+ +..++. ...+..+++.+ +.|++|.++.....
T Consensus 1 MkiLiI~gs----pr~~s~t~~l~~~~~~~~-~~g~~v~~~dL~~~ 41 (196)
T 3lcm_A 1 MKILIVYTH----PNPTSFNAEILKQVQTNL-SKEHTVSTLDLYAE 41 (196)
T ss_dssp CEEEEEECC----SCTTSHHHHHHHHHHHHS-CTTSEEEEEETTTT
T ss_pred CEEEEEEeC----CCCCChHHHHHHHHHHHh-cCCCeEEEEEcccC
Confidence 799999876 234453 33445555566 67999999887654
No 151
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=54.79 E-value=25 Score=27.22 Aligned_cols=43 Identities=14% Similarity=0.057 Sum_probs=31.8
Q ss_pred ce-eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 79 KL-KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 79 ~m-kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
.| |++++.+.-|. ..-..+....++.++...|++|.|+...+.
T Consensus 4 ~Mkk~~ivv~~~P~---g~~~~~~al~~a~a~~a~~~~v~Vff~~DG 47 (136)
T 2hy5_B 4 VVKKFMYLNRKAPY---GTIYAWEALEVVLIGAAFDQDVCVLFLDDG 47 (136)
T ss_dssp -CCEEEEEECSCTT---TSSHHHHHHHHHHHHGGGCCEEEEEECGGG
T ss_pred chhEEEEEEeCCCC---CcHHHHHHHHHHHHHHhCCCCEEEEEEhHH
Confidence 35 59999887443 223556678899999999999999988764
No 152
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=54.78 E-value=13 Score=33.74 Aligned_cols=35 Identities=29% Similarity=0.471 Sum_probs=25.7
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|||++... .|+.+. .+++.|.+.||+|.++....
T Consensus 13 ~M~ilVtGa-------tG~iG~---~l~~~L~~~g~~V~~~~r~~ 47 (342)
T 2x4g_A 13 HVKYAVLGA-------TGLLGH---HAARAIRAAGHDLVLIHRPS 47 (342)
T ss_dssp CCEEEEEST-------TSHHHH---HHHHHHHHTTCEEEEEECTT
T ss_pred CCEEEEECC-------CcHHHH---HHHHHHHHCCCEEEEEecCh
Confidence 478887642 366554 67788889999999988654
No 153
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=54.70 E-value=49 Score=24.84 Aligned_cols=76 Identities=11% Similarity=0.102 Sum_probs=46.3
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHHc--CCeEEec-CCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMHC--GRTVLTP-NYPSIV--RTVVVNEELGYTFSP-NVKSFVEALEL 420 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma~--G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~~ 420 (465)
++....+.. .|++++-..-++.-|..+++.+.. ..|+|.. ...... .+.+..|..+++..| +.++|..++.+
T Consensus 38 ~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~ 117 (136)
T 2qzj_A 38 EEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYINEDQSILNALNSGGDDYLIKPLNLEILYAKVKA 117 (136)
T ss_dssp HHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHH
Confidence 455555543 577776322223345667777643 5677643 322211 123445778999999 99999999988
Q ss_pred HHhC
Q 044542 421 VIRD 424 (465)
Q Consensus 421 ll~~ 424 (465)
++..
T Consensus 118 ~~~~ 121 (136)
T 2qzj_A 118 ILRR 121 (136)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 154
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=54.60 E-value=71 Score=24.53 Aligned_cols=76 Identities=12% Similarity=0.106 Sum_probs=49.2
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH-----cCCeEEecCCCCcce---eeeeeCCceEEeCC-CHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH-----CGRTVLTPNYPSIVR---TVVVNEELGYTFSP-NVKSFVEA 417 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma-----~G~PvI~s~~gg~~~---e~v~~~~~G~l~~~-d~~~la~~ 417 (465)
++....+.. .|++++-..-++.-|..+++.+. ..+|+|........+ +.+..|..+++..| +.++|..+
T Consensus 41 ~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 120 (154)
T 3gt7_A 41 REAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDFITKPCKDVVLASH 120 (154)
T ss_dssp HHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHHCCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHCCCCEEEeCCCCHHHHHHH
Confidence 455555543 57777743333455777887775 356777533222221 23445778999999 99999999
Q ss_pred HHHHHhC
Q 044542 418 LELVIRD 424 (465)
Q Consensus 418 i~~ll~~ 424 (465)
|.+++..
T Consensus 121 i~~~l~~ 127 (154)
T 3gt7_A 121 VKRLLSG 127 (154)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 155
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=54.23 E-value=62 Score=23.78 Aligned_cols=76 Identities=9% Similarity=0.029 Sum_probs=45.2
Q ss_pred ChhHHHHHHHh---cCeEEecccCCC-CCcHHHHHHHH---cCCeEEec-CCCCcc--eeeeeeCCceEEeCC-CHHHHH
Q 044542 347 EAHQLSEFYNA---LDVFVNPTLRPQ-GLDLTLIEAMH---CGRTVLTP-NYPSIV--RTVVVNEELGYTFSP-NVKSFV 415 (465)
Q Consensus 347 ~~~~~~~~~~~---aDv~v~ps~~~e-g~~~~~~EAma---~G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~-d~~~la 415 (465)
+.++....+.. .|++++-..-++ .-|..+++.+. .++|+|.. ...... ...+.. .+++..| +.++|.
T Consensus 37 ~~~~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~--~~~l~kP~~~~~l~ 114 (132)
T 2rdm_A 37 SGAKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHAALEWASNGVPD--SIILEKPFTSAQLI 114 (132)
T ss_dssp SHHHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSCCTTHHHHSCTT--CEEEESSCCHHHHH
T ss_pred CHHHHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCccHHHHHhhcCC--cceEeCCCCHHHHH
Confidence 33555555543 588777432233 45666676664 35777753 322211 011111 2688889 999999
Q ss_pred HHHHHHHhC
Q 044542 416 EALELVIRD 424 (465)
Q Consensus 416 ~~i~~ll~~ 424 (465)
.+|.+++..
T Consensus 115 ~~i~~~~~~ 123 (132)
T 2rdm_A 115 TAVSQLLNA 123 (132)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999998876
No 156
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=54.22 E-value=14 Score=33.42 Aligned_cols=95 Identities=18% Similarity=0.132 Sum_probs=47.6
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCC-------C---c-ccCCcceEEEeecCC-
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPH-------N---D-VHQGNLHVHFAANDH- 145 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-------~---~-~~~~~~~v~~~~~~~- 145 (465)
++|||+|+... .+.....++|.+.||+|..+.+.++.... . + ....+..+.......
T Consensus 6 ~~mrivf~Gt~-----------~fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~ 74 (318)
T 3q0i_A 6 QSLRIVFAGTP-----------DFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPENFKS 74 (318)
T ss_dssp -CCEEEEECCS-----------HHHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHTTCCEECCSCSCS
T ss_pred cCCEEEEEecC-----------HHHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEccCcCCC
Confidence 47999998652 23445567788889998766665432211 0 1 112222222111110
Q ss_pred -CccccCCCCCCcEEEecCCc--hhHHhhhcCCcEEEEecc
Q 044542 146 -GSVNLNNDGAFDYVHTESVS--LPHWRAKMVPNVAVTWHG 183 (465)
Q Consensus 146 -~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 183 (465)
......+..+||++++-.+. ++..+....+.-++.+|.
T Consensus 75 ~~~~~~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHp 115 (318)
T 3q0i_A 75 DESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHG 115 (318)
T ss_dssp HHHHHHHHTTCCSEEEESSCCSCCCHHHHTSSTTCEEEEES
T ss_pred HHHHHHHHhcCCCEEEEeCccccCCHHHHhhCcCCEEEeCC
Confidence 01112267899999987652 222222222324778885
No 157
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=54.20 E-value=24 Score=26.26 Aligned_cols=36 Identities=8% Similarity=0.115 Sum_probs=25.4
Q ss_pred CCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEe
Q 044542 75 PTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT 120 (465)
Q Consensus 75 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 120 (465)
|.++++||+++... ......+...|.+.|++|..+.
T Consensus 1 m~m~~~~ilivdd~----------~~~~~~l~~~L~~~g~~v~~~~ 36 (132)
T 2rdm_A 1 MSLEAVTILLADDE----------AILLLDFESTLTDAGFLVTAVS 36 (132)
T ss_dssp -CCSSCEEEEECSS----------HHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCCceEEEEcCc----------HHHHHHHHHHHHHcCCEEEEEC
Confidence 34567899999764 3455677788888899887543
No 158
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=54.17 E-value=21 Score=27.11 Aligned_cols=36 Identities=11% Similarity=0.043 Sum_probs=24.8
Q ss_pred CCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEe
Q 044542 75 PTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT 120 (465)
Q Consensus 75 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 120 (465)
+.+.+++|+++... ......+...|.+.|++|..+.
T Consensus 3 ~~~~~~~iLivdd~----------~~~~~~l~~~L~~~g~~v~~~~ 38 (142)
T 3cg4_A 3 LAEHKGDVMIVDDD----------AHVRIAVKTILSDAGFHIISAD 38 (142)
T ss_dssp ---CCCEEEEECSC----------HHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCCCeEEEEcCC----------HHHHHHHHHHHHHCCeEEEEeC
Confidence 34567899999765 4456678888888899876544
No 159
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=54.09 E-value=25 Score=28.19 Aligned_cols=42 Identities=24% Similarity=0.218 Sum_probs=28.9
Q ss_pred CCCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 74 GPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 74 ~~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.+++.+|||++=+.. +|.+. =..+.+.|.++||+|.=+....
T Consensus 16 ~~~~~~MkIaIgsDh-------aG~~l-K~~i~~~L~~~G~eV~D~G~~~ 57 (166)
T 3s5p_A 16 TQGPGSMKVAFASDH-------GGRDL-RMFLQQRASAHGYEVMDLGTES 57 (166)
T ss_dssp ---CTTCEEEEEECG-------GGHHH-HHHHHHHHHHTTCEEEEEEC--
T ss_pred CCCCCceEEEEEECc-------hHHHH-HHHHHHHHHHCCCEEEEcCCCC
Confidence 346677999988764 56543 4578889999999998886554
No 160
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=53.87 E-value=7.4 Score=31.40 Aligned_cols=39 Identities=21% Similarity=0.260 Sum_probs=27.9
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+|||+++-.+ ..|..+..+..+++.|.+.|++|.++...
T Consensus 9 ~~ki~I~Y~S-----~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 47 (167)
T 1ykg_A 9 MPGITIISAS-----QTGNARRVAEALRDDLLAAKLNVKLVNAG 47 (167)
T ss_dssp ---CEEEEEC-----SSSHHHHHHHHHHHHHHHHTCCCEEEEGG
T ss_pred CCeEEEEEEC-----CchHHHHHHHHHHHHHHHCCCceEEeehh
Confidence 4577666432 55888899999999999889988877543
No 161
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=53.15 E-value=67 Score=23.83 Aligned_cols=105 Identities=10% Similarity=0.123 Sum_probs=60.1
Q ss_pred CeEEEEEeCCcch-----hHHHHhcCCeEEcCCCChhHHHHHHHh---cCeEEecccCCCCCcHHHHHHHHc----CCeE
Q 044542 318 GVYLLVAGTGPWG-----RRYAELGQNVKVLGALEAHQLSEFYNA---LDVFVNPTLRPQGLDLTLIEAMHC----GRTV 385 (465)
Q Consensus 318 ~~~l~ivG~g~~~-----~~~~~l~~~V~~~g~v~~~~~~~~~~~---aDv~v~ps~~~eg~~~~~~EAma~----G~Pv 385 (465)
..+++|+.+.+.. ..+++.+-.|... -+.++....+.. .|++++-..-++.-|..+++.+.. .+|+
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~--~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~i 84 (136)
T 3hdv_A 7 RPLVLVVDDNAVNREALILYLKSRGIDAVGA--DGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSI 84 (136)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCCEEEE--SSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHHcCceEEEe--CCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCE
Confidence 3456666654321 1222233333332 233555555443 577777433335567788887754 3677
Q ss_pred EecCCCCcc---eeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 386 LTPNYPSIV---RTVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 386 I~s~~gg~~---~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
|........ .+.+..|..+++..| +.++|.++|.++...
T Consensus 85 i~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~ 127 (136)
T 3hdv_A 85 IVVSGDTDVEEAVDVMHLGVVDFLLKPVDLGKLLELVNKELKI 127 (136)
T ss_dssp EEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHC-
T ss_pred EEEeCCCChHHHHHHHhCCcceEEeCCCCHHHHHHHHHHHhcC
Confidence 753322211 123445778999999 999999999999876
No 162
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=53.13 E-value=73 Score=24.24 Aligned_cols=67 Identities=7% Similarity=-0.028 Sum_probs=42.6
Q ss_pred hcCeEEecccCCCCCcHHHHHHHHc-----CCeEEec-CCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHHHHHh
Q 044542 357 ALDVFVNPTLRPQGLDLTLIEAMHC-----GRTVLTP-NYPSIV--RTVVVNEELGYTFSP-NVKSFVEALELVIR 423 (465)
Q Consensus 357 ~aDv~v~ps~~~eg~~~~~~EAma~-----G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~~ll~ 423 (465)
..|++++--.-++.-|..+++.+.. ++|+|.. ...... .+.+..|..+++..| +.++|.++|.+++.
T Consensus 61 ~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~ 136 (149)
T 1i3c_A 61 RPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRNLKDLFKMVQGIES 136 (149)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCCChHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHH
Confidence 3688887432234456777777753 4677643 332211 123445778999999 99999999988754
No 163
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=53.01 E-value=19 Score=31.27 Aligned_cols=42 Identities=17% Similarity=0.162 Sum_probs=33.0
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTA 121 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 121 (465)
..++||.++|+.. ...-|-......|+++|+++|++|..+=+
T Consensus 22 ~~~~m~~i~Itgt----~t~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 22 FQSHMTILVVTGT----GTGVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp CCSSCEEEEEEES----STTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cccCCCEEEEEeC----CCCCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 3456788888765 24567788899999999999999988754
No 164
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=52.94 E-value=71 Score=24.03 Aligned_cols=67 Identities=10% Similarity=0.089 Sum_probs=43.7
Q ss_pred cCeEEecccCCCCCcHHHHHHHH-----cCCeEEec-CCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 358 LDVFVNPTLRPQGLDLTLIEAMH-----CGRTVLTP-NYPSIV--RTVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 358 aDv~v~ps~~~eg~~~~~~EAma-----~G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
.|++++-..-++.-|..+++.+. .++|+|.. ...... .+.+..+..+++..| +.++|.+.|.+++..
T Consensus 63 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~ 138 (149)
T 1k66_A 63 PAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIVKPLEIDRLTETVQTFIKY 138 (149)
T ss_dssp CSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCCCHHHHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHHH
Confidence 58888743333445677888775 35677753 332211 123345678999999 999999999988764
No 165
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=52.83 E-value=13 Score=31.31 Aligned_cols=42 Identities=19% Similarity=0.092 Sum_probs=28.7
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHh-CCcEEEEEeCCCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAA-RGHEIHVFTAPSD 124 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~~~ 124 (465)
...++||++.... |........+++.|.+ .|++|+++.+...
T Consensus 16 ~l~~k~IllgvTG-------siaa~k~~~lv~~L~~~~g~~V~vv~T~~A 58 (206)
T 1qzu_A 16 MERKFHVLVGVTG-------SVAALKLPLLVSKLLDIPGLEVAVVTTERA 58 (206)
T ss_dssp CCSSEEEEEEECS-------SGGGGTHHHHHHHHC---CEEEEEEECTGG
T ss_pred ccCCCEEEEEEeC-------hHHHHHHHHHHHHHhcccCCEEEEEECHhH
Confidence 3445688887763 2223456789999998 8999999987754
No 166
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=52.61 E-value=27 Score=25.96 Aligned_cols=35 Identities=9% Similarity=0.056 Sum_probs=25.7
Q ss_pred CCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEE
Q 044542 75 PTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVF 119 (465)
Q Consensus 75 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~ 119 (465)
+++.++||+++... ......+.+.|.+.|++|...
T Consensus 3 ~~~~~~~ilivdd~----------~~~~~~l~~~L~~~g~~v~~~ 37 (130)
T 3eod_A 3 QPLVGKQILIVEDE----------QVFRSLLDSWFSSLGATTVLA 37 (130)
T ss_dssp CTTTTCEEEEECSC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCeEEEEeCC----------HHHHHHHHHHHHhCCceEEEe
Confidence 34557799999765 344667788888899988764
No 167
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=52.36 E-value=25 Score=30.94 Aligned_cols=49 Identities=16% Similarity=0.147 Sum_probs=36.4
Q ss_pred cccCCCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 71 LCFGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 71 l~~~~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+.+.+..++||++.|+..- ..-|-...+.+|+..|++.|..|.++-.+.
T Consensus 73 l~~~~~~~~~kvI~vts~k----gG~GKTt~a~nLA~~lA~~G~rVLLID~D~ 121 (271)
T 3bfv_A 73 IMFANPDSAVQSIVITSEA----PGAGKSTIAANLAVAYAQAGYKTLIVDGDM 121 (271)
T ss_dssp HHHSSTTCCCCEEEEECSS----TTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred HHhhccCCCCeEEEEECCC----CCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 3344455677888887642 335677889999999999999999987664
No 168
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=52.25 E-value=76 Score=24.18 Aligned_cols=76 Identities=13% Similarity=0.040 Sum_probs=47.9
Q ss_pred hHHHHHHH--hcCeEEecccCCCCCcHHHHHHHHc---CCeEEec-CCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542 349 HQLSEFYN--ALDVFVNPTLRPQGLDLTLIEAMHC---GRTVLTP-NYPSIV--RTVVVNEELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 349 ~~~~~~~~--~aDv~v~ps~~~eg~~~~~~EAma~---G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~ 419 (465)
++..+.+. ..|++++-...++.-|..+++.+.. ..|||.. ...... .+.+..|..+++..+ +.++|.++|.
T Consensus 51 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~ 130 (152)
T 3eul_A 51 AAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVL 130 (152)
T ss_dssp HHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCCEEEecCCCHHHHHHHHH
Confidence 44444442 3677776433234556777776653 5677653 322211 123455778999999 9999999999
Q ss_pred HHHhC
Q 044542 420 LVIRD 424 (465)
Q Consensus 420 ~ll~~ 424 (465)
+++..
T Consensus 131 ~~~~~ 135 (152)
T 3eul_A 131 DCAKG 135 (152)
T ss_dssp HHHHC
T ss_pred HHHcC
Confidence 99987
No 169
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=52.24 E-value=22 Score=27.92 Aligned_cols=39 Identities=18% Similarity=0.105 Sum_probs=28.3
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|..|||++=+.. +|.+. =..+.+.|.+.||+|.=+....
T Consensus 5 m~~mkI~igsDh-------aG~~l-K~~i~~~L~~~G~eV~D~G~~~ 43 (148)
T 4em8_A 5 MVVKRVFLSSDH-------AGVEL-RLFLSAYLRDLGCEVFDCGCDP 43 (148)
T ss_dssp CSCSEEEEEECG-------GGHHH-HHHHHHHHHHTTCEEEECCCCT
T ss_pred ceeeEEEEEECc-------hhHHH-HHHHHHHHHHCCCEEEEeCCCC
Confidence 446899987764 56543 4578889999999998776543
No 170
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=52.20 E-value=71 Score=23.85 Aligned_cols=76 Identities=12% Similarity=0.073 Sum_probs=48.6
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHHc-----CCeEEecCCCCcce---eeeeeCCceEEeCC-CHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMHC-----GRTVLTPNYPSIVR---TVVVNEELGYTFSP-NVKSFVEA 417 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma~-----G~PvI~s~~gg~~~---e~v~~~~~G~l~~~-d~~~la~~ 417 (465)
++..+.+.. .|++++-..-++.-|..+++.+.. ..|+|.....+..+ +.+..|..+++..| +.++|..+
T Consensus 38 ~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 117 (136)
T 3t6k_A 38 EEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGDISAKIAGFEAGANDYLAKPFEPQELVYR 117 (136)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHHHHTCSEEEETTCCHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCCHHHHHHHHhcCcceEEeCCCCHHHHHHH
Confidence 444444433 577777433334557777777643 56777533222221 23445778999999 99999999
Q ss_pred HHHHHhC
Q 044542 418 LELVIRD 424 (465)
Q Consensus 418 i~~ll~~ 424 (465)
+.+++..
T Consensus 118 i~~~l~~ 124 (136)
T 3t6k_A 118 VKNILAR 124 (136)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 9999876
No 171
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=52.13 E-value=22 Score=27.04 Aligned_cols=35 Identities=14% Similarity=0.262 Sum_probs=23.4
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEe
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT 120 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 120 (465)
.++++||+++... ......+...|.+.|++|..+.
T Consensus 2 ~~~~~~ilivdd~----------~~~~~~l~~~L~~~g~~v~~~~ 36 (140)
T 3h5i_A 2 SLKDKKILIVEDS----------KFQAKTIANILNKYGYTVEIAL 36 (140)
T ss_dssp ----CEEEEECSC----------HHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCcEEEEEeCC----------HHHHHHHHHHHHHcCCEEEEec
Confidence 4556799999765 3456677888888899887544
No 172
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=52.09 E-value=41 Score=25.11 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=24.4
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCC-cEEEEEeC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARG-HEIHVFTA 121 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~ 121 (465)
.++||+++... ......+...|.+.| ++|..+..
T Consensus 13 ~~~~ilivdd~----------~~~~~~l~~~L~~~g~~~v~~~~~ 47 (135)
T 3snk_A 13 KRKQVALFSSD----------PNFKRDVATRLDALAIYDVRVSET 47 (135)
T ss_dssp CCEEEEEECSC----------HHHHHHHHHHHHHTSSEEEEEECG
T ss_pred CCcEEEEEcCC----------HHHHHHHHHHHhhcCCeEEEEecc
Confidence 35689998764 345667788888899 98885543
No 173
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=52.04 E-value=77 Score=24.18 Aligned_cols=77 Identities=12% Similarity=0.157 Sum_probs=46.4
Q ss_pred hhHHHHHHHh---cCeEEecccCCCCCcHHHHHHHH---cCCeEEecCCCCcc---eeeeeeCCceEEeCC-CHHHHHHH
Q 044542 348 AHQLSEFYNA---LDVFVNPTLRPQGLDLTLIEAMH---CGRTVLTPNYPSIV---RTVVVNEELGYTFSP-NVKSFVEA 417 (465)
Q Consensus 348 ~~~~~~~~~~---aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~s~~gg~~---~e~v~~~~~G~l~~~-d~~~la~~ 417 (465)
.++....+.. .|++++-..-++.-|..+++.+. .++|+|........ .+.+..+..+++..| +.++|.++
T Consensus 38 ~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~ 117 (154)
T 2qsj_A 38 VSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVALISGETDHELIRAALEAGADGFIPKSADPQVLIHA 117 (154)
T ss_dssp HHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEEEEC-----CHHHHHHHHTTCCBBCCTTSCHHHHHHH
T ss_pred HHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHccCCEEEeCCCCHHHHHHH
Confidence 3666666655 68887743222334666666664 36788764322211 123345677889999 99999999
Q ss_pred HHHHHhC
Q 044542 418 LELVIRD 424 (465)
Q Consensus 418 i~~ll~~ 424 (465)
|..++..
T Consensus 118 l~~~~~~ 124 (154)
T 2qsj_A 118 VSLILEG 124 (154)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9999875
No 174
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=52.00 E-value=18 Score=30.65 Aligned_cols=99 Identities=11% Similarity=0.081 Sum_probs=50.9
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHh-CCcEEEEEeCCCCCCCCCc-ccCCcceEEEeecC--CCc----
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAA-RGHEIHVFTAPSDRKPHND-VHQGNLHVHFAAND--HGS---- 147 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~~~~~~~~~-~~~~~~~v~~~~~~--~~~---- 147 (465)
..++|||+++... +| ..+..+.+++.+ .+++|..+.+...+....+ -...+..+...... ...
T Consensus 2 ~~~~~riavl~SG-------~G--snl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~~~~~~r~~~d 72 (215)
T 3tqr_A 2 NREPLPIVVLISG-------NG--TNLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIPHEEFPSRTDFE 72 (215)
T ss_dssp --CCEEEEEEESS-------CC--HHHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECCGGGSSSHHHHH
T ss_pred CCCCcEEEEEEeC-------Cc--HHHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCccccCchhHhH
Confidence 4567899988653 22 346677777765 3688877766543332211 12223333332211 111
Q ss_pred ---cccCCCCCCcEEEecCCc--hhHHhhhcCCcEEEEecc
Q 044542 148 ---VNLNNDGAFDYVHTESVS--LPHWRAKMVPNVAVTWHG 183 (465)
Q Consensus 148 ---~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 183 (465)
....++.++|+|++-.+. +...+-...+.-++.+|.
T Consensus 73 ~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 113 (215)
T 3tqr_A 73 STLQKTIDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHP 113 (215)
T ss_dssp HHHHHHHHTTCCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred HHHHHHHHhcCCCEEEEccchhhCCHHHHhhccCCeEEeCc
Confidence 112268899999987652 222222222224777785
No 175
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=51.87 E-value=15 Score=30.24 Aligned_cols=35 Identities=17% Similarity=0.267 Sum_probs=24.6
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.+|||++.. ..||.++ .+++.|. +|++|.++....
T Consensus 2 ~kM~vlVtG-------asg~iG~---~~~~~l~-~g~~V~~~~r~~ 36 (202)
T 3d7l_A 2 NAMKILLIG-------ASGTLGS---AVKERLE-KKAEVITAGRHS 36 (202)
T ss_dssp CSCEEEEET-------TTSHHHH---HHHHHHT-TTSEEEEEESSS
T ss_pred CCcEEEEEc-------CCcHHHH---HHHHHHH-CCCeEEEEecCc
Confidence 357876653 3366654 6788888 899999887553
No 176
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=51.52 E-value=11 Score=34.61 Aligned_cols=37 Identities=11% Similarity=0.080 Sum_probs=25.6
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|.+|||+++.. .|+.++ .+++.|.+.||+|.+++...
T Consensus 8 M~~~~IlVtGa-------tG~iG~---~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGA-------TGFIGQ---FVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECT-------TSHHHH---HHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECC-------CcHHHH---HHHHHHHHCCCCEEEEECCC
Confidence 34578888743 355554 57788889999999998765
No 177
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=51.22 E-value=43 Score=30.27 Aligned_cols=71 Identities=13% Similarity=0.053 Sum_probs=39.0
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCcccCCcceEEEeecCCCccccCCCCCCcE
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHNDVHQGNLHVHFAANDHGSVNLNNDGAFDY 158 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~Di 158 (465)
+|||.++. .||.+ +..+++.|.++|++|.+.-..........+...+..+..-... . .. ...++|+
T Consensus 4 ~~~i~~iG--------iGg~G--ms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~-~--~l-~~~~~d~ 69 (326)
T 3eag_A 4 MKHIHIIG--------IGGTF--MGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDA-A--QL-DEFKADV 69 (326)
T ss_dssp CCEEEEES--------CCSHH--HHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCG-G--GG-GSCCCSE
T ss_pred CcEEEEEE--------ECHHH--HHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCH-H--Hc-CCCCCCE
Confidence 45888873 46654 3357889999999999987654322111233334444321110 0 00 0035898
Q ss_pred EEecC
Q 044542 159 VHTES 163 (465)
Q Consensus 159 I~~~~ 163 (465)
|+...
T Consensus 70 vV~Sp 74 (326)
T 3eag_A 70 YVIGN 74 (326)
T ss_dssp EEECT
T ss_pred EEECC
Confidence 88753
No 178
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=51.21 E-value=74 Score=23.76 Aligned_cols=76 Identities=18% Similarity=0.153 Sum_probs=46.1
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHHc-----CCeEEe-cCCCCcceeeee--eCCceEEeCC-CHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMHC-----GRTVLT-PNYPSIVRTVVV--NEELGYTFSP-NVKSFVEA 417 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma~-----G~PvI~-s~~gg~~~e~v~--~~~~G~l~~~-d~~~la~~ 417 (465)
++....+.. .|++++-..-++.-|..+++.+.. .+|||. +........... .+..+++..| +.++|.++
T Consensus 37 ~~al~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~ 116 (138)
T 3c3m_A 37 EECLEALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAKPLTPEEANEYGSYIEDYILKPTTHHQLYEA 116 (138)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESSCCCHHHHHHTTTTCSEEEECCCHHHHHHHH
T ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECCCChHHHHHHhhcCHhheEeCCCCHHHHHHH
Confidence 455555543 578776432234457778887753 567774 333222111111 1235899999 99999999
Q ss_pred HHHHHhC
Q 044542 418 LELVIRD 424 (465)
Q Consensus 418 i~~ll~~ 424 (465)
|..++..
T Consensus 117 i~~~~~~ 123 (138)
T 3c3m_A 117 IEHVLAR 123 (138)
T ss_dssp HHHHHSC
T ss_pred HHHHHHH
Confidence 9998876
No 179
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=50.62 E-value=24 Score=25.74 Aligned_cols=33 Identities=15% Similarity=0.243 Sum_probs=23.6
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCC-cEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARG-HEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~ 122 (465)
+|||+++. . |+++. .+++.|.+.| ++|.++...
T Consensus 5 ~~~v~I~G-------~-G~iG~---~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVG-------A-GKIGQ---MIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEEC-------C-SHHHH---HHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEEC-------C-CHHHH---HHHHHHHhCCCceEEEEeCC
Confidence 46888772 2 66544 5778888899 998887754
No 180
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=50.47 E-value=8.4 Score=34.85 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=24.0
Q ss_pred CCCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCc-EEEEEeCC
Q 044542 74 GPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGH-EIHVFTAP 122 (465)
Q Consensus 74 ~~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~-~V~v~~~~ 122 (465)
++.+.+|||++|.. |-+ -..++..|.+.|| +|.++...
T Consensus 19 ~~~~~~~~I~iIG~--------G~m---G~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 19 YFQSNAMKLGFIGF--------GEA---ASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp ------CEEEEECC--------SHH---HHHHHHHHHHHSCCEEEEECSS
T ss_pred cccCCCCEEEEECc--------cHH---HHHHHHHHHHCCCCeEEEEcCC
Confidence 44556789999953 333 3468888888999 99888654
No 181
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=49.97 E-value=25 Score=31.15 Aligned_cols=41 Identities=20% Similarity=0.210 Sum_probs=30.2
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|||+.|+.. ...-|-...+.+|+.+|++.|.+|.++-.+.
T Consensus 3 M~kvI~v~s~----KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 3 ETRVIVVGNE----KGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp -CEEEEECCS----SSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEEcC----CCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 3566666543 2345667789999999999999999887665
No 182
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=49.93 E-value=20 Score=32.42 Aligned_cols=36 Identities=17% Similarity=0.087 Sum_probs=25.4
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+..|+|++.. ..|+++. .+++.|.+.|++|.++...
T Consensus 9 ~~~~~vlVTG-------atG~iG~---~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVTG-------ANGFVAS---HVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEEC-------CccHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 3456777663 3366654 5778888999999988754
No 183
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=49.88 E-value=30 Score=28.27 Aligned_cols=41 Identities=12% Similarity=0.108 Sum_probs=28.6
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC------CcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAAR------GHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~------G~~V~v~~~~~ 123 (465)
|||++|..+. ...|-....+..+++.+.+. |++|.++....
T Consensus 1 Mkilii~gS~---r~~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~~ 47 (191)
T 1t0i_A 1 MKVGIIMGSV---RAKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQ 47 (191)
T ss_dssp CEEEEEECCC---CSSCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHHH
T ss_pred CeEEEEeCCC---CCCCchHHHHHHHHHHHHHhhccCCCCceEEEEehhh
Confidence 7999998762 12244566677778888776 78998886543
No 184
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=49.83 E-value=19 Score=27.09 Aligned_cols=41 Identities=15% Similarity=0.051 Sum_probs=29.6
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCC--cEEEEEeCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARG--HEIHVFTAPSD 124 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~ 124 (465)
||++++...-+ ......+...++....++| ++|.++.....
T Consensus 8 ~K~~ivi~s~d----~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~ 50 (117)
T 2fb6_A 8 DKLTILWTTDN----KDTVFNMLAMYALNSKNRGWWKHINIILWGAS 50 (117)
T ss_dssp SEEEEEECCCC----HHHHHHTHHHHHHHHHHHTSCSEEEEEECSHH
T ss_pred CeEEEEEEcCC----hHHHHHHHHHHHHHHHHcCCCCcEEEEEECCe
Confidence 79999887521 1122245788898889999 79999987753
No 185
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=49.34 E-value=11 Score=34.33 Aligned_cols=38 Identities=16% Similarity=0.106 Sum_probs=27.1
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
+.+|||+++. ..|+++ ..+++.|.++||+|.++.....
T Consensus 23 ~~~~~vlVtG-------atG~iG---~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 23 FSPKTWLITG-------VAGFIG---SNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp HSCCEEEEET-------TTSHHH---HHHHHHHHHTTCEEEEEECCSS
T ss_pred CCCCeEEEEC-------CCcHHH---HHHHHHHHHCCCEEEEEeCCCC
Confidence 3456888763 235554 4688889999999999987653
No 186
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=49.33 E-value=79 Score=23.54 Aligned_cols=76 Identities=8% Similarity=0.063 Sum_probs=49.6
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHHc-----CCeEEe-cCCCCcc--eeeeeeCCceEEeCC-CHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMHC-----GRTVLT-PNYPSIV--RTVVVNEELGYTFSP-NVKSFVEA 417 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma~-----G~PvI~-s~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~ 417 (465)
++....+.. .|++++-..-++.-|..+++.+.. ++|+|. +...... .+.+..+..+++..| +.++|.++
T Consensus 44 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~ 123 (143)
T 3cnb_A 44 FDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETCFGKPLNFTLLEKT 123 (143)
T ss_dssp HHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEEEeCCCCHHHHHHH
Confidence 555555543 588877433334456777777754 567775 3332221 123445678999999 99999999
Q ss_pred HHHHHhC
Q 044542 418 LELVIRD 424 (465)
Q Consensus 418 i~~ll~~ 424 (465)
|.+++..
T Consensus 124 i~~~~~~ 130 (143)
T 3cnb_A 124 IKQLVEQ 130 (143)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9999876
No 187
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=49.11 E-value=14 Score=31.71 Aligned_cols=39 Identities=26% Similarity=0.261 Sum_probs=29.6
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
|||++ +.. ..-|-...+.+|+..|+++|++|.++-.+..
T Consensus 1 mkI~v-s~k-----GGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MKLAV-AGK-----GGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp CEEEE-ECS-----SSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred CEEEE-ecC-----CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 78888 542 2234456788999999999999999987763
No 188
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=49.06 E-value=23 Score=30.26 Aligned_cols=40 Identities=10% Similarity=0.037 Sum_probs=31.5
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTA 121 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 121 (465)
.+||.++|+.. ...-|-......|+++|+++|.+|..+=+
T Consensus 2 ~~mk~i~Itgt----~t~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 2 NAMKKFFIIGT----DTEVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TTCEEEEEEES----SSSSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCcEEEEEeC----CCCCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 35788888765 24467788899999999999999988653
No 189
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=48.84 E-value=18 Score=30.44 Aligned_cols=33 Identities=18% Similarity=0.315 Sum_probs=25.9
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|||+++. + +..-..+++.|.+.|++|.++....
T Consensus 1 M~iiIiG----------~-G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIG----------G-ETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEEC----------C-HHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEEC----------C-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence 6888773 2 4567789999999999999998653
No 190
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=48.58 E-value=17 Score=29.58 Aligned_cols=38 Identities=11% Similarity=0.044 Sum_probs=28.3
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
+||++.... +........+++.|.+.|++|+++.+...
T Consensus 6 k~IllgvTG-------s~aa~k~~~ll~~L~~~g~~V~vv~T~~A 43 (175)
T 3qjg_A 6 ENVLICLCG-------SVNSINISHYIIELKSKFDEVNVIASTNG 43 (175)
T ss_dssp CEEEEEECS-------SGGGGGHHHHHHHHTTTCSEEEEEECTGG
T ss_pred CEEEEEEeC-------HHHHHHHHHHHHHHHHCCCEEEEEECcCH
Confidence 478877653 22233578899999999999999987754
No 191
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=48.51 E-value=10 Score=32.48 Aligned_cols=97 Identities=8% Similarity=0.043 Sum_probs=50.2
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC--CcEEEEEeCCCCCCCCCc-ccCCcceEEEeec-CCC-------
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR--GHEIHVFTAPSDRKPHND-VHQGNLHVHFAAN-DHG------- 146 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~-~~~~~~~v~~~~~-~~~------- 146 (465)
++|||+++... .| ..+..+.++|.+. +++|..+.+...+....+ ....+..+..... ...
T Consensus 21 ~~~rI~~l~SG-------~g--~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~ 91 (229)
T 3auf_A 21 HMIRIGVLISG-------SG--TNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYPSRTAFDA 91 (229)
T ss_dssp TCEEEEEEESS-------CC--HHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSSSHHHHHH
T ss_pred CCcEEEEEEeC-------Cc--HHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccccchhhccH
Confidence 35799999653 12 3567788888776 678765555433221111 1223333333221 111
Q ss_pred -ccccCCCCCCcEEEecCCc--hhHHhhhcCCcEEEEecc
Q 044542 147 -SVNLNNDGAFDYVHTESVS--LPHWRAKMVPNVAVTWHG 183 (465)
Q Consensus 147 -~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 183 (465)
.....+..+||+|++-.+. ++..+-...+.-++.+|.
T Consensus 92 ~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHp 131 (229)
T 3auf_A 92 ALAERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHP 131 (229)
T ss_dssp HHHHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEEEES
T ss_pred HHHHHHHhcCCCEEEEcChhHhCCHHHHhhccCCEEEEcc
Confidence 1112256799999987652 222222222335778885
No 192
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=48.33 E-value=75 Score=22.96 Aligned_cols=76 Identities=12% Similarity=0.107 Sum_probs=45.8
Q ss_pred hHHHHHHH--hcCeEEecccCCCCCcHHHHHHHHc-----CCeEEecCCCCcc---eeeeeeCCceEEeCC-CHHHHHHH
Q 044542 349 HQLSEFYN--ALDVFVNPTLRPQGLDLTLIEAMHC-----GRTVLTPNYPSIV---RTVVVNEELGYTFSP-NVKSFVEA 417 (465)
Q Consensus 349 ~~~~~~~~--~aDv~v~ps~~~eg~~~~~~EAma~-----G~PvI~s~~gg~~---~e~v~~~~~G~l~~~-d~~~la~~ 417 (465)
++....+. ..|++++-..-++.-|..+++.+.. .+|+|........ .+....|..+++..| +.+++.++
T Consensus 35 ~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 114 (124)
T 1mb3_A 35 LSALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAFAMKGDEERIREGGCEAYISKPISVVHFLET 114 (124)
T ss_dssp HHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC------CHHHHHHHTCSEEECSSCCHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHH
Confidence 44444443 3688776432234446677777753 5688754322111 123345778999999 99999999
Q ss_pred HHHHHhC
Q 044542 418 LELVIRD 424 (465)
Q Consensus 418 i~~ll~~ 424 (465)
+.+++..
T Consensus 115 i~~~~~~ 121 (124)
T 1mb3_A 115 IKRLLER 121 (124)
T ss_dssp HHHHHSC
T ss_pred HHHHHhc
Confidence 9988764
No 193
>1r5j_A Putative phosphotransacetylase; lactate dehydrogenase-like nucleotide-binding fold, structural genomics, BSGC structure funded by NIH; 2.70A {Streptococcus pyogenes} SCOP: c.77.1.5
Probab=48.13 E-value=4.1 Score=37.45 Aligned_cols=78 Identities=15% Similarity=0.182 Sum_probs=44.5
Q ss_pred cCCCCCCcEEEEEeeccc--cccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHH--HH--
Q 044542 280 LGVPANVSLVMGVAGRLV--RDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQL--SE-- 353 (465)
Q Consensus 280 ~g~~~~~~~~l~~~Grl~--~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~--~~-- 353 (465)
+|+ +.+ +-++..|... ..|+.+.+.+|++.++++.|++ .+.|. ++.+.. .+
T Consensus 202 ~Gi-~Pr-VAlLs~~~~G~e~~~~~~~i~~A~~llk~~~~~~--~v~Gp-------------------l~~D~a~~~~~~ 258 (337)
T 1r5j_A 202 FDI-DPK-IAMLSFSTKGSGKAPQVDKVREATEIATGLNPDL--ALDGE-------------------LQFDAAFVPETA 258 (337)
T ss_dssp TTC-CCC-EEEECSCSTTSSCSHHHHHHHHHHHHHHHHCTTS--CEEEE-------------------ECHHHHHCHHHH
T ss_pred cCC-CCe-EEEEecCccCCCCCCCcHHHHHHHHHHhccCCCc--EEEec-------------------CcHHHhcCHHHH
Confidence 777 443 5555553332 3455666777877777654432 34453 332222 01
Q ss_pred --------HHHhcCeEEecccCCCCCcHHHHHHHH
Q 044542 354 --------FYNALDVFVNPTLRPQGLDLTLIEAMH 380 (465)
Q Consensus 354 --------~~~~aDv~v~ps~~~eg~~~~~~EAma 380 (465)
+-..+|++|+|.......++++++.+.
T Consensus 259 ~~k~~~s~~~G~aDvlv~p~~d~GnI~~K~l~~~~ 293 (337)
T 1r5j_A 259 AIKAPDSAVAGQANTFVFPDLQSGNIGYKIAQRLG 293 (337)
T ss_dssp HHHSCSCSSTTCCCEEECSSHHHHHHHHHHHHHTT
T ss_pred HhhCCCCccCCCCCEEEECChHHHHHHHHHHHHhc
Confidence 125689999998764456677777655
No 194
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=47.97 E-value=28 Score=29.24 Aligned_cols=41 Identities=2% Similarity=0.001 Sum_probs=29.4
Q ss_pred ceeEEEEeCCCCCCCC--CChHH-HHHHHHHHHHHhC--CcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAA--PGGME-RHASTLYHALAAR--GHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~--~gG~~-~~~~~l~~~L~~~--G~~V~v~~~~~ 123 (465)
+|||++|..+ +. .++.. ..+..+++.+.+. |++|+++-...
T Consensus 4 M~kiLiI~gS----pr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~dL~~ 49 (211)
T 3p0r_A 4 MTKVLFVKAN----NRPAEQAVSVKLYEAFLASYKEAHPNDTVVELDLYK 49 (211)
T ss_dssp CCEEEEEECC----CSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEEGGG
T ss_pred cCEEEEEEeC----CCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 4799999876 23 45544 4556777888776 89999887664
No 195
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=47.92 E-value=14 Score=33.13 Aligned_cols=36 Identities=11% Similarity=0.036 Sum_probs=24.7
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
...+|||++|.. |-+ -..++..|.+.||+|+++...
T Consensus 4 ~~~~~~I~iIG~--------G~m---G~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 4 TGTDFHVGIVGL--------GSM---GMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp ---CCEEEEECC--------SHH---HHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCCeEEEECC--------CHH---HHHHHHHHHHCCCeEEEEECC
Confidence 345689999953 333 346788899999999988544
No 196
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=47.91 E-value=35 Score=29.02 Aligned_cols=42 Identities=7% Similarity=0.045 Sum_probs=27.6
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDR 125 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 125 (465)
-.++++.+.++. +........+++.|.+.|+.|..+.....+
T Consensus 46 ~p~vv~~HG~~~----~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G 87 (270)
T 3pfb_A 46 YDMAIIFHGFTA----NRNTSLLREIANSLRDENIASVRFDFNGHG 87 (270)
T ss_dssp EEEEEEECCTTC----CTTCHHHHHHHHHHHHTTCEEEEECCTTST
T ss_pred CCEEEEEcCCCC----CccccHHHHHHHHHHhCCcEEEEEcccccc
Confidence 345555554421 111455778999999999999888776544
No 197
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=47.89 E-value=15 Score=33.07 Aligned_cols=36 Identities=14% Similarity=0.269 Sum_probs=26.3
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
...+|||++|.. |-+ -..++..|.+.||+|+++...
T Consensus 18 ~~~m~~I~iIG~--------G~m---G~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGL--------GIM---GKAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECC--------SHH---HHHHHHHHHHTTCEEEEECSS
T ss_pred cccCCEEEEECc--------cHH---HHHHHHHHHHCCCeEEEEeCC
Confidence 445689999953 333 346888899999999987554
No 198
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=47.85 E-value=29 Score=29.03 Aligned_cols=42 Identities=7% Similarity=-0.020 Sum_probs=30.0
Q ss_pred ceeEEEEeCCCCCCCCC-Ch-HHHHHHHHHHHHHhC--CcEEEEEeCCCC
Q 044542 79 KLKLAVFSKTWPIGAAP-GG-MERHASTLYHALAAR--GHEIHVFTAPSD 124 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~-gG-~~~~~~~l~~~L~~~--G~~V~v~~~~~~ 124 (465)
+|||++|..+ +.. +| ....+..+++.+.+. |++|.++-....
T Consensus 1 MmkiLii~gS----pr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL~~~ 46 (212)
T 3r6w_A 1 MSRILAVHAS----PRGERSQSRRLAEVFLAAYREAHPQARVARREVGRV 46 (212)
T ss_dssp CCCEEEEECC----SCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEESSSS
T ss_pred CCEEEEEEeC----CCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 4799999876 232 33 445667788888877 899999877653
No 199
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=47.73 E-value=14 Score=30.47 Aligned_cols=39 Identities=13% Similarity=0.141 Sum_probs=23.1
Q ss_pred ceeEEEEeCCCCCCCCCChH-HHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGM-ERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~-~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+|||++|..+ +..+|. ...+..+++.+. .|++|.++...
T Consensus 6 ~Mkilii~gS----~r~~g~t~~la~~i~~~l~-~g~~v~~~dl~ 45 (193)
T 1rtt_A 6 DIKVLGISGS----LRSGSYNSAALQEAIGLVP-PGMSIELADIS 45 (193)
T ss_dssp -CEEEEEESC----CSTTCHHHHHHHHHHTTCC-TTCEEEECCCT
T ss_pred CceEEEEECC----CCCCChHHHHHHHHHHhcc-CCCeEEEEeHH
Confidence 5899999876 233443 333444444444 58888877654
No 200
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=47.66 E-value=18 Score=29.94 Aligned_cols=40 Identities=25% Similarity=0.203 Sum_probs=31.2
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.|||+++-. ...|..+.++..+++.|.+.|++|.++....
T Consensus 21 ~~kv~IvY~-----S~tGnTe~~A~~ia~~l~~~g~~v~v~~l~~ 60 (191)
T 1bvy_F 21 NTPLLVLYG-----SNMGTAEGTARDLADIAMSKGFAPQVATLDS 60 (191)
T ss_dssp CCCEEEEEE-----CSSSHHHHHHHHHHHHHHTTTCCCEEEEGGG
T ss_pred CCeEEEEEE-----CCChHHHHHHHHHHHHHHhCCCceEEeeHHH
Confidence 457776643 2569999999999999999999988876543
No 201
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=47.61 E-value=14 Score=33.57 Aligned_cols=39 Identities=18% Similarity=0.261 Sum_probs=24.9
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
..++|+|++.. ..|+++. .+++.|.+.||+|.++.....
T Consensus 16 ~~~~~~vlVtG-------atG~iG~---~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 16 PRGSHMILVTG-------SAGRVGR---AVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp -----CEEEET-------TTSHHHH---HHHHHHHHTTCCEEEEESSCC
T ss_pred ccCCCEEEEEC-------CCChHHH---HHHHHHHhCCCEEEEEeCCCC
Confidence 34456787763 2366554 678899999999999876653
No 202
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=47.55 E-value=34 Score=24.51 Aligned_cols=74 Identities=9% Similarity=0.080 Sum_probs=44.8
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH-----cCCeEEe-cCCCCcceeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH-----CGRTVLT-PNYPSIVRTVVVNEELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma-----~G~PvI~-s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~ 419 (465)
++....+.. .|++++-...++.-|..+++.+. .++|+|. ++.+... +....+..+++..| +.+++.+.+.
T Consensus 35 ~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~~~~-~~~~~g~~~~l~kp~~~~~l~~~l~ 113 (119)
T 2j48_A 35 STALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEPPVD-PLLTAQASAILSKPLDPQLLLTTLQ 113 (119)
T ss_dssp HHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSCCSS-HHHHHHCSEECSSCSTTHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCCCch-hhhhcCHHHhccCCCCHHHHHHHHH
Confidence 454444433 57777643223445677777775 4567764 3333222 33445667888888 9999998887
Q ss_pred HHHh
Q 044542 420 LVIR 423 (465)
Q Consensus 420 ~ll~ 423 (465)
+++.
T Consensus 114 ~~~~ 117 (119)
T 2j48_A 114 GLCP 117 (119)
T ss_dssp TTCC
T ss_pred HHhc
Confidence 6643
No 203
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=47.49 E-value=79 Score=23.02 Aligned_cols=76 Identities=12% Similarity=0.131 Sum_probs=46.4
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH---cCCeEEec-CCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH---CGRTVLTP-NYPSIV--RTVVVNEELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~ 419 (465)
++....+.. .|++++-..-+..-|..+++.+. .+.|+|.. ...... .+.+..|..+++..| +.+++.+++.
T Consensus 37 ~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~ 116 (126)
T 1dbw_A 37 EAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIE 116 (126)
T ss_dssp HHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHhCHHHheeCCCCHHHHHHHHH
Confidence 455555443 46777632222344666666664 35677753 332211 123445778999999 9999999999
Q ss_pred HHHhC
Q 044542 420 LVIRD 424 (465)
Q Consensus 420 ~ll~~ 424 (465)
+++..
T Consensus 117 ~~~~~ 121 (126)
T 1dbw_A 117 RASEH 121 (126)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 88765
No 204
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=47.46 E-value=14 Score=32.95 Aligned_cols=59 Identities=10% Similarity=-0.088 Sum_probs=36.9
Q ss_pred hHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeee---ee--CCceEEeCC
Q 044542 349 HQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVV---VN--EELGYTFSP 409 (465)
Q Consensus 349 ~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v---~~--~~~G~l~~~ 409 (465)
.++.+++..+|++|--|. ++..--.+..++..|+|+|...+|-.. +.. .+ .+.++++.+
T Consensus 80 ~dl~~ll~~aDVvIDFT~-p~a~~~~~~~~l~~Gv~vViGTTG~~~-e~~~~L~~aa~~~~~~~a~ 143 (288)
T 3ijp_A 80 DDPESAFSNTEGILDFSQ-PQASVLYANYAAQKSLIHIIGTTGFSK-TEEAQIADFAKYTTIVKSG 143 (288)
T ss_dssp SCHHHHTTSCSEEEECSC-HHHHHHHHHHHHHHTCEEEECCCCCCH-HHHHHHHHHHTTSEEEECS
T ss_pred CCHHHHhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEEEECCCCCH-HHHHHHHHHhCcCCEEEEC
Confidence 467777789999996543 233333456688999999987766433 211 11 245667766
No 205
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=47.44 E-value=86 Score=23.43 Aligned_cols=78 Identities=10% Similarity=0.067 Sum_probs=49.3
Q ss_pred ChhHHHHHHHh---cCeEEecccCCC-CCcHHHHHHHH--cCCeEEecCCCCcc---eeeeeeCCceEEeCC-CHHHHHH
Q 044542 347 EAHQLSEFYNA---LDVFVNPTLRPQ-GLDLTLIEAMH--CGRTVLTPNYPSIV---RTVVVNEELGYTFSP-NVKSFVE 416 (465)
Q Consensus 347 ~~~~~~~~~~~---aDv~v~ps~~~e-g~~~~~~EAma--~G~PvI~s~~gg~~---~e~v~~~~~G~l~~~-d~~~la~ 416 (465)
+.++....+.. .|++++-..-++ .-|..+++.+. -.+|+|........ .+....|..+++..| +.++|.+
T Consensus 37 ~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~ 116 (140)
T 3h5i_A 37 TGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSATEQVLIT 116 (140)
T ss_dssp SHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESSSSCCCCGGGGGSCEEEEEETTCCHHHHHH
T ss_pred ChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECCCCHHHHHHHHhCCCcEEEeCCCCHHHHHH
Confidence 34566565543 588887433223 45666776664 46788753222211 133445678899999 9999999
Q ss_pred HHHHHHhC
Q 044542 417 ALELVIRD 424 (465)
Q Consensus 417 ~i~~ll~~ 424 (465)
+|.++++.
T Consensus 117 ~i~~~l~~ 124 (140)
T 3h5i_A 117 IVEMALRL 124 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998875
No 206
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=47.42 E-value=18 Score=28.34 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=24.7
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+.+|+++.. ++.-..+++.|.+.|++|+++...
T Consensus 3 ~~~vlI~G~-----------G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH-----------SILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC-----------SHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECC-----------CHHHHHHHHHHHHCCCCEEEEECC
Confidence 457887731 234568889999999999999875
No 207
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=47.37 E-value=33 Score=26.49 Aligned_cols=35 Identities=14% Similarity=0.285 Sum_probs=25.5
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEe
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT 120 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 120 (465)
.++++||+++... ......+...|.+.|++|..+.
T Consensus 4 ~~~~~~iLivdd~----------~~~~~~l~~~L~~~g~~v~~~~ 38 (154)
T 2rjn_A 4 NYKNYTVMLVDDE----------QPILNSLKRLIKRLGCNIITFT 38 (154)
T ss_dssp CCSCCEEEEECSC----------HHHHHHHHHHHHTTTCEEEEES
T ss_pred CCCCCeEEEEcCC----------HHHHHHHHHHHHHcCCeEEEeC
Confidence 4567899999765 3456677888888899887443
No 208
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=47.27 E-value=33 Score=25.69 Aligned_cols=41 Identities=22% Similarity=0.240 Sum_probs=30.4
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
|++++.+.=|.+ .-..+-...++.++...||+|.|+...+.
T Consensus 3 k~~~vv~~~P~g---~~~~~~al~~a~a~~a~~~~v~vff~~DG 43 (119)
T 2d1p_B 3 RIAFVFSTAPHG---TAAGREGLDALLATSALTDDLAVFFIADG 43 (119)
T ss_dssp CEEEEECSCTTT---STHHHHHHHHHHHHHTTCSCEEEEECGGG
T ss_pred EEEEEEcCCCCC---cHHHHHHHHHHHHHHhCCCCEEEEEehHH
Confidence 688888874431 23346677899999999999999988764
No 209
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=47.25 E-value=30 Score=28.53 Aligned_cols=36 Identities=17% Similarity=0.201 Sum_probs=27.1
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
||++.... . .| ......+++.|.+.|++|+++.+..
T Consensus 3 ~IllgvTG-----s-~a-a~k~~~l~~~L~~~g~~V~vv~T~~ 38 (189)
T 2ejb_A 3 KIALCITG-----A-SG-VIYGIKLLQVLEELDFSVDLVISRN 38 (189)
T ss_dssp EEEEEECS-----S-TT-HHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred EEEEEEEC-----H-HH-HHHHHHHHHHHHHCCCEEEEEEChh
Confidence 77777653 1 23 3467899999999999999998654
No 210
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=47.03 E-value=92 Score=23.63 Aligned_cols=67 Identities=13% Similarity=0.245 Sum_probs=43.1
Q ss_pred cCeEEecccCCCCCcHHHHHHHHc---CCeEEec-CCCCc--ceeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 358 LDVFVNPTLRPQGLDLTLIEAMHC---GRTVLTP-NYPSI--VRTVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 358 aDv~v~ps~~~eg~~~~~~EAma~---G~PvI~s-~~gg~--~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
.|++++-..-++.-|..+++.+.. .+|+|.. ..... ..+.+..+..+++..+ +.++|.++|.+++..
T Consensus 67 ~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~ 140 (150)
T 4e7p_A 67 VDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEG 140 (150)
T ss_dssp CSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHHHHHcC
Confidence 466666432234556677766643 5677643 32221 1123455778999999 999999999999876
No 211
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=47.01 E-value=7.7 Score=35.62 Aligned_cols=37 Identities=8% Similarity=0.027 Sum_probs=26.0
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+.+|+|++.. ..|+++. .+++.|.+.|++|.++....
T Consensus 25 ~~~~~vlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r~~ 61 (352)
T 1sb8_A 25 AQPKVWLITG-------VAGFIGS---NLLETLLKLDQKVVGLDNFA 61 (352)
T ss_dssp HSCCEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEECCS
T ss_pred ccCCeEEEEC-------CCcHHHH---HHHHHHHHCCCEEEEEeCCC
Confidence 4456777663 3366654 67888889999999987654
No 212
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=46.83 E-value=20 Score=35.05 Aligned_cols=37 Identities=24% Similarity=0.358 Sum_probs=27.3
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDR 125 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 125 (465)
+|||++... .|+++. .+++.|.+.||+|+++......
T Consensus 147 ~m~VLVTGa-------tG~IG~---~l~~~L~~~G~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGS-------RGLVGR---ALTAQLQTGGHEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEEST-------TSHHHH---HHHHHHHHTTCEEEEEESSSCC
T ss_pred CCEEEEECC-------CCHHHH---HHHHHHHHCCCEEEEEECCCCC
Confidence 688887742 355544 6788899999999999876543
No 213
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=46.76 E-value=88 Score=23.34 Aligned_cols=104 Identities=8% Similarity=0.087 Sum_probs=60.9
Q ss_pred eEEEEEeCCcch-----hHHHHhcC--CeEEcCCCChhHHHHHHHh--------cCeEEecccCCCCCcHHHHHHHH---
Q 044542 319 VYLLVAGTGPWG-----RRYAELGQ--NVKVLGALEAHQLSEFYNA--------LDVFVNPTLRPQGLDLTLIEAMH--- 380 (465)
Q Consensus 319 ~~l~ivG~g~~~-----~~~~~l~~--~V~~~g~v~~~~~~~~~~~--------aDv~v~ps~~~eg~~~~~~EAma--- 380 (465)
.+++|+.+.+.. ..+++.+. .|..... .++....+.. .|++++-..-++.-|..+++.+.
T Consensus 8 ~~ILivdd~~~~~~~l~~~L~~~g~~~~v~~~~~--~~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~~~l~~~~ 85 (143)
T 2qvg_A 8 VDILYLEDDEVDIQSVERVFHKISSLIKIEIAKS--GNQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFLKELRDDS 85 (143)
T ss_dssp CSEEEECCCHHHHHHHHHHHHHHCTTCCEEEESS--HHHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHHHHHTTSG
T ss_pred CeEEEEeCCHHHHHHHHHHHHHhCCCceEEEECC--HHHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHHHHHHcCc
Confidence 456666654322 22333333 5554444 3666666653 68888743323445677787775
Q ss_pred --cCCeEEecCCCCcc---eeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 381 --CGRTVLTPNYPSIV---RTVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 381 --~G~PvI~s~~gg~~---~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
.++|+|........ .+....+..+++..| +.++|.+++......
T Consensus 86 ~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~~~~~~~~ 135 (143)
T 2qvg_A 86 SFTDIEVFVLTAAYTSKDKLAFESLNIRGHLIKPLDYGEAIKLFWILQSM 135 (143)
T ss_dssp GGTTCEEEEEESCCCHHHHHHHTTTTCCEEEESSCCHHHHHHHHHHHHHC
T ss_pred cccCCcEEEEeCCCCHHHHHHHHhcCCCeEEECCCCHHHHHHHHHHHHHh
Confidence 46787754222211 123445678899999 999999997765543
No 214
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=46.74 E-value=25 Score=30.55 Aligned_cols=45 Identities=13% Similarity=0.147 Sum_probs=31.5
Q ss_pred CCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 75 PTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 75 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
|..++|||+.|+.. ...-|-...+.+|+.+|+ +|.+|.++-.+..
T Consensus 22 ~~~~~~~vI~v~s~----kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~ 66 (267)
T 3k9g_A 22 MDNKKPKIITIASI----KGGVGKSTSAIILATLLS-KNNKVLLIDMDTQ 66 (267)
T ss_dssp ----CCEEEEECCS----SSSSCHHHHHHHHHHHHT-TTSCEEEEEECTT
T ss_pred CCCCCCeEEEEEeC----CCCchHHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 34556787777653 233466778899999999 9999999987753
No 215
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=46.49 E-value=15 Score=33.85 Aligned_cols=37 Identities=11% Similarity=0.187 Sum_probs=25.4
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-CcEEEEEeCCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GHEIHVFTAPS 123 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~ 123 (465)
+.+|||+++. ..|+++. .+++.|.+. ||+|+++....
T Consensus 22 m~~~~vlVtG-------atG~iG~---~l~~~L~~~~g~~V~~~~r~~ 59 (372)
T 3slg_A 22 MKAKKVLILG-------VNGFIGH---HLSKRILETTDWEVFGMDMQT 59 (372)
T ss_dssp -CCCEEEEES-------CSSHHHH---HHHHHHHHHSSCEEEEEESCC
T ss_pred cCCCEEEEEC-------CCChHHH---HHHHHHHhCCCCEEEEEeCCh
Confidence 3456777763 2365554 677888887 99999998654
No 216
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=46.42 E-value=17 Score=33.46 Aligned_cols=36 Identities=28% Similarity=0.339 Sum_probs=25.5
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.+|+|+++. ..|+.++ .+++.|.+.||+|.+++...
T Consensus 4 ~~~~ilVtG-------atG~iG~---~l~~~L~~~g~~V~~~~R~~ 39 (352)
T 1xgk_A 4 QKKTIAVVG-------ATGRQGA---SLIRVAAAVGHHVRAQVHSL 39 (352)
T ss_dssp CCCCEEEES-------TTSHHHH---HHHHHHHHTTCCEEEEESCS
T ss_pred CCCEEEEEC-------CCCHHHH---HHHHHHHhCCCEEEEEECCC
Confidence 356787763 3366654 57788888999999987654
No 217
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=46.20 E-value=20 Score=32.33 Aligned_cols=39 Identities=18% Similarity=0.096 Sum_probs=25.6
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
....|||++.. ..|+++. .+++.|.+.|++|.++.....
T Consensus 11 ~~~~~~vlVTG-------atG~iG~---~l~~~L~~~g~~V~~~~r~~~ 49 (335)
T 1rpn_A 11 GSMTRSALVTG-------ITGQDGA---YLAKLLLEKGYRVHGLVARRS 49 (335)
T ss_dssp ----CEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEECCCS
T ss_pred cccCCeEEEEC-------CCChHHH---HHHHHHHHCCCeEEEEeCCCc
Confidence 33456887763 3366654 678888899999999886543
No 218
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=46.11 E-value=20 Score=32.02 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=24.7
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|||++.. ..|++++ .+++.|.++||+|.++....
T Consensus 1 m~vlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r~~ 34 (312)
T 3ko8_A 1 MRIVVTG-------GAGFIGS---HLVDKLVELGYEVVVVDNLS 34 (312)
T ss_dssp CEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEECCCS
T ss_pred CEEEEEC-------CCChHHH---HHHHHHHhCCCEEEEEeCCC
Confidence 6777663 2366654 67889999999999886544
No 219
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=45.77 E-value=21 Score=32.40 Aligned_cols=37 Identities=22% Similarity=0.276 Sum_probs=24.9
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+.+|+|++.. ..|+.+ ..+++.|.+.|++|.++....
T Consensus 25 ~~~~~vlVtG-------atG~iG---~~l~~~L~~~g~~V~~~~r~~ 61 (343)
T 2b69_A 25 KDRKRILITG-------GAGFVG---SHLTDKLMMDGHEVTVVDNFF 61 (343)
T ss_dssp --CCEEEEET-------TTSHHH---HHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCEEEEEc-------CccHHH---HHHHHHHHHCCCEEEEEeCCC
Confidence 3456777663 236654 467888889999999987643
No 220
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=45.73 E-value=21 Score=30.75 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=25.7
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
||+++|+. ..||+++ .+++.|.++|++|.++....
T Consensus 1 mk~vlVTG------as~gIG~---~~a~~l~~~G~~V~~~~r~~ 35 (257)
T 1fjh_A 1 MSIIVISG------CATGIGA---ATRKVLEAAGHQIVGIDIRD 35 (257)
T ss_dssp CCEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEeC------CCCHHHH---HHHHHHHHCCCEEEEEeCCc
Confidence 56667764 3477655 68888999999998887553
No 221
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=45.41 E-value=35 Score=25.11 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=24.4
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEe
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT 120 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 120 (465)
.++||+++... ......+.+.|.+.|++|..+.
T Consensus 2 ~~~~ilivdd~----------~~~~~~l~~~L~~~g~~v~~~~ 34 (127)
T 3i42_A 2 SLQQALIVEDY----------QAAAETFKELLEMLGFQADYVM 34 (127)
T ss_dssp CCEEEEEECSC----------HHHHHHHHHHHHHTTEEEEEES
T ss_pred CcceEEEEcCC----------HHHHHHHHHHHHHcCCCEEEEC
Confidence 45799999764 3456677888888899877654
No 222
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=45.08 E-value=24 Score=29.58 Aligned_cols=36 Identities=14% Similarity=0.110 Sum_probs=24.5
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHH-hCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALA-ARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~-~~G~~V~v~~~~~ 123 (465)
+||.++|+. ..||+++ .+++.|. +.|++|.++....
T Consensus 4 mmk~vlVtG------asg~iG~---~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 4 MYXYITILG------AAGQIAQ---XLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp SCSEEEEES------TTSHHHH---HHHHHHHHHCCCEEEEEESSH
T ss_pred eEEEEEEEe------CCcHHHH---HHHHHHHhcCCceEEEEecCc
Confidence 367444442 3467654 6778888 8999999987654
No 223
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=44.58 E-value=19 Score=31.11 Aligned_cols=37 Identities=35% Similarity=0.512 Sum_probs=25.6
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+...|||++|.. |.+ -..++..|.+.||+|.++....
T Consensus 16 ~~~~~kIgiIG~--------G~m---G~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 16 YFQGMKIAVLGT--------GTV---GRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp ---CCEEEEECC--------SHH---HHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCeEEEECC--------CHH---HHHHHHHHHHCCCEEEEEeCCh
Confidence 445689999943 443 3467889999999999886553
No 224
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=44.45 E-value=27 Score=31.15 Aligned_cols=44 Identities=14% Similarity=0.101 Sum_probs=32.2
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
..++|||+.|+ . ...-|-...+.+|+.+|+++|..|.++-.+..
T Consensus 37 ~~~~~~vI~v~-~----KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~ 80 (307)
T 3end_A 37 KITGAKVFAVY-G----KGGIGKSTTSSNLSAAFSILGKRVLQIGCDPK 80 (307)
T ss_dssp ---CCEEEEEE-C----STTSSHHHHHHHHHHHHHHTTCCEEEEEESSS
T ss_pred ccCCceEEEEE-C----CCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 44467777776 3 24456778899999999999999999987753
No 225
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=44.27 E-value=45 Score=24.70 Aligned_cols=68 Identities=16% Similarity=0.181 Sum_probs=45.6
Q ss_pred hcCeEEecccCCCCCcHHHHHHHHc-----CCeEEec-CCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 357 ALDVFVNPTLRPQGLDLTLIEAMHC-----GRTVLTP-NYPSIV--RTVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 357 ~aDv~v~ps~~~eg~~~~~~EAma~-----G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
..|++++-..-++.-|..+++.+.. .+|+|.. ...... .+.+..|..+++..| ++++|.+++..++..
T Consensus 51 ~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~l~~~l~~ 127 (129)
T 3h1g_A 51 DTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGT 127 (129)
T ss_dssp TCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCCSHHHHHHHHHHTCCEEEESCCCHHHHHHHHHHHHCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCCChHHHHHHHHcCccEEEeCCCCHHHHHHHHHHHhcc
Confidence 3678776433345567788888753 5677753 332211 123455778999999 999999999998764
No 226
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=44.21 E-value=23 Score=30.32 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=23.9
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
||.++|+. ..||+++ .+++.|.++|++|.++....
T Consensus 1 Mk~vlVtG------asg~iG~---~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 1 MSVIAITG------SASGIGA---ALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp -CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESSS
T ss_pred CcEEEEeC------CCcHHHH---HHHHHHHhCCCEEEEEeCCh
Confidence 55555553 3477655 57888999999999887653
No 227
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=44.21 E-value=19 Score=29.98 Aligned_cols=36 Identities=8% Similarity=0.038 Sum_probs=25.1
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCc--EEEEEeCCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGH--EIHVFTAPSD 124 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~--~V~v~~~~~~ 124 (465)
.|||+++. ..|+.+. .+++.|.++|+ +|.++.....
T Consensus 5 ~~~vlVtG-------atG~iG~---~l~~~l~~~g~~~~V~~~~r~~~ 42 (215)
T 2a35_A 5 PKRVLLAG-------ATGLTGE---HLLDRILSEPTLAKVIAPARKAL 42 (215)
T ss_dssp CCEEEEEC-------TTSHHHH---HHHHHHHHCTTCCEEECCBSSCC
T ss_pred CceEEEEC-------CCcHHHH---HHHHHHHhCCCCCeEEEEeCCCc
Confidence 46787763 2366544 67888999998 8888776543
No 228
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=44.15 E-value=1.5e+02 Score=25.11 Aligned_cols=66 Identities=12% Similarity=0.177 Sum_probs=43.3
Q ss_pred cCeEEecccCCCCCcHHHHHHHHc---CCeEEecCCCCcce---eeeeeCCceEEeCC-CHHHHHHHHHHHHh
Q 044542 358 LDVFVNPTLRPQGLDLTLIEAMHC---GRTVLTPNYPSIVR---TVVVNEELGYTFSP-NVKSFVEALELVIR 423 (465)
Q Consensus 358 aDv~v~ps~~~eg~~~~~~EAma~---G~PvI~s~~gg~~~---e~v~~~~~G~l~~~-d~~~la~~i~~ll~ 423 (465)
.|++++--.-++.-|..+++.+.. ..|||........+ +.+..|..+++..| +.++|..+|..++.
T Consensus 68 ~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~Kp~~~~~L~~~i~~~~~ 140 (250)
T 3r0j_A 68 PDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILR 140 (250)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECSTTHHHHHHHHTSTTCEEEESSCCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 677777432234556777777643 46777533222111 23456778999999 99999999998875
No 229
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=44.14 E-value=97 Score=23.06 Aligned_cols=76 Identities=11% Similarity=0.023 Sum_probs=44.4
Q ss_pred hHHHHHHH--hcCeEEecccCCCCCcHHHHHHHH-----cCCeEEecCCCCcc---eeeeeeCCceEEeCC-CHHHHHHH
Q 044542 349 HQLSEFYN--ALDVFVNPTLRPQGLDLTLIEAMH-----CGRTVLTPNYPSIV---RTVVVNEELGYTFSP-NVKSFVEA 417 (465)
Q Consensus 349 ~~~~~~~~--~aDv~v~ps~~~eg~~~~~~EAma-----~G~PvI~s~~gg~~---~e~v~~~~~G~l~~~-d~~~la~~ 417 (465)
++....+. ..|++++-..-++.-|..+++.+. .+.|+|........ .+.+..|..+++..| +.++|.++
T Consensus 36 ~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 115 (140)
T 3n53_A 36 KEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYLTKPFNRNDLLSR 115 (140)
T ss_dssp HHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC----CTTTTTTCCCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhcCCCeeeeCCCCHHHHHHH
Confidence 45555443 357877743223444566777665 46787753222111 123455678999999 99999999
Q ss_pred HHHHHhC
Q 044542 418 LELVIRD 424 (465)
Q Consensus 418 i~~ll~~ 424 (465)
|..++..
T Consensus 116 i~~~~~~ 122 (140)
T 3n53_A 116 IEIHLRT 122 (140)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9999875
No 230
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=44.12 E-value=98 Score=23.11 Aligned_cols=76 Identities=11% Similarity=0.151 Sum_probs=48.2
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHHc---CCeEE-ecCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMHC---GRTVL-TPNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELV 421 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma~---G~PvI-~s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~l 421 (465)
++....+.. .|++++-..-++.-|..+++.+.. ..|+| .+.......+.+..+..+++..| +.++|.++|.++
T Consensus 45 ~~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~ 124 (143)
T 2qv0_A 45 LDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRIINMLQKL 124 (143)
T ss_dssp HHHHHHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEEEEESCCTTHHHHHHTTCSEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceEEEEeCCHHHHHHHHhCCcceEEeCCCCHHHHHHHHHHH
Confidence 455555543 588877433234456777777754 34554 34332222234456778999999 999999999998
Q ss_pred HhC
Q 044542 422 IRD 424 (465)
Q Consensus 422 l~~ 424 (465)
+..
T Consensus 125 ~~~ 127 (143)
T 2qv0_A 125 TTA 127 (143)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
No 231
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=44.11 E-value=14 Score=34.20 Aligned_cols=37 Identities=19% Similarity=0.315 Sum_probs=26.6
Q ss_pred CCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 75 PTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 75 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|++.+|||+++.. |.. -..++..|++.||+|.++...
T Consensus 25 m~~~~mkI~VIGa--------G~m---G~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 25 MEPFKHPIAILGA--------GSW---GTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp --CCCSCEEEECC--------SHH---HHHHHHHHHTTTCCEEEECSC
T ss_pred ccccCCeEEEECc--------cHH---HHHHHHHHHHCCCeEEEEeCC
Confidence 4556789999954 333 335888999999999998764
No 232
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=43.76 E-value=23 Score=32.04 Aligned_cols=36 Identities=17% Similarity=0.065 Sum_probs=25.3
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
.|+|++.. ..|+++. .+++.|.++||+|.++.....
T Consensus 3 ~~~vlVtG-------atG~iG~---~l~~~L~~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 3 GKRALITG-------IRGQDGA---YLAKLLLEKGYEVYGADRRSG 38 (345)
T ss_dssp CCEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEECSCCS
T ss_pred CCEEEEEC-------CCChHHH---HHHHHHHHCCCEEEEEECCCc
Confidence 45777653 3366654 678888899999998876543
No 233
>1jg7_A BGT, DNA beta-glucosyltransferase; glycosyltransferase; HET: DNA UDP; 1.65A {Enterobacteria phage T4} SCOP: c.87.1.1 PDB: 1bgu_A* 1bgt_A* 1ixy_A* 1c3j_A* 1jej_A* 1jg6_A* 1j39_A* 1jiu_A* 1jiv_A* 1jix_A* 1m5r_A* 1nvk_A* 1qkj_A* 1sxp_A* 1sxq_A* 2bgt_A 2bgu_A* 1nzd_A* 1nzf_A*
Probab=43.62 E-value=1.5e+02 Score=24.95 Aligned_cols=145 Identities=9% Similarity=0.038 Sum_probs=86.5
Q ss_pred EEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc----CCeEEcCCCChhHHHHHHHhcCeEEe
Q 044542 288 LVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG----QNVKVLGALEAHQLSEFYNALDVFVN 363 (465)
Q Consensus 288 ~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~----~~V~~~g~v~~~~~~~~~~~aDv~v~ 363 (465)
.-++|-|.+.....-..+++ -|-+. ...+-+.|+.... +++.-. ..-.|.|.+|..++.+--+.|-+.+.
T Consensus 182 ~d~iyggsfrsg~re~kmve---~lfdt--gl~ieffg~~~~~-qfknp~~pwt~~pvf~gki~~~~~~~~ns~a~a~~i 255 (351)
T 1jg7_A 182 LDVIYGGSFRSGQRESKMVE---FLFDT--GLNIEFFGNAREK-QFKNPKYPWTKAPVFTGKIPMNMVSEKNSQAIAALI 255 (351)
T ss_dssp EEEEEECCCGGGTTHHHHHH---HHSSC--SSCEEEESSCCGG-GCCCTTSCCSSCCEEEECCCGGGHHHHHTTEEEEEE
T ss_pred eeeeeccccccCchHHHHHH---HHHhc--CcceeeecchhHH-hccCCCCCCcCCCccCCcCCHHHHhhccccceEEEE
Confidence 56778888876665544444 33343 3445567864322 222221 45579999998888887777665554
Q ss_pred ccc--CCC-CCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 044542 364 PTL--RPQ-GLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSPNVKSFVEALELVIRDGPKVLQRKGLACKEHA 440 (465)
Q Consensus 364 ps~--~~e-g~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~ 440 (465)
-.. +.. -.-.-+.|+||.-...+.-..-.....++. + .-+.+. +-.+|.+.+.++-.+ ...+.++-+-.....
T Consensus 256 ~gdk~y~~n~it~rvwe~~as~av~~~d~~fd~~~~i~~-~-a~fyv~-nr~elid~in~~k~~-~~~r~e~l~~qh~il 331 (351)
T 1jg7_A 256 IGDKNYNDNFITLRVWETMASDAVMLIDEEFDTKHRIIN-D-ARFYVN-NRAELIDRVNELKHS-DVLRKEMLSIQHDIL 331 (351)
T ss_dssp CCCGGGTTTCCCHHHHHHHTSSSEEEEEGGGCTTCCSCS-C-GGGEEC-SHHHHHHHHHHHHHC-HHHHHHHHHHHHHHH
T ss_pred eccccccCCeecHHHHHHHhhhhHhhhhcccCccccccc-C-ceeEec-CHHHHHHHHhhccch-HHHHHHHHHHHHHHH
Confidence 321 222 235788999998876654222111113333 3 235555 889999999999887 777777665444433
Q ss_pred Hh
Q 044542 441 LS 442 (465)
Q Consensus 441 ~~ 442 (465)
.+
T Consensus 332 ~k 333 (351)
T 1jg7_A 332 NK 333 (351)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 234
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=43.32 E-value=25 Score=31.72 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=27.0
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
....|+|++.. ..|+++. .+++.|.+.|++|.++....
T Consensus 17 ~~~~~~vlVTG-------asG~iG~---~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 17 RGSHMRILITG-------GAGCLGS---NLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TTTCCEEEEET-------TTSHHHH---HHHHHHGGGTCEEEEEECCS
T ss_pred cCCCCEEEEEC-------CCCHHHH---HHHHHHHHCCCEEEEEECCC
Confidence 34457887763 3366654 67888999999999987643
No 235
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=43.10 E-value=51 Score=27.92 Aligned_cols=42 Identities=7% Similarity=0.034 Sum_probs=29.2
Q ss_pred ceeEEEEeCCCCCCCC---CChHHH-HHHHHHHHHHhC--Cc-EEEEEeCCCC
Q 044542 79 KLKLAVFSKTWPIGAA---PGGMER-HASTLYHALAAR--GH-EIHVFTAPSD 124 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~---~gG~~~-~~~~l~~~L~~~--G~-~V~v~~~~~~ 124 (465)
+|||++|..+ +. .++... .+..+++.+.+. |+ +|+++-....
T Consensus 4 MmkIL~I~gS----pr~~~~~S~s~~L~~~~~~~l~~~~~~~~ev~~idL~~~ 52 (223)
T 3u7i_A 4 MNKTLIINAH----PKVDDTSSVSIKVFKHFLESYKELISNNETIEQINLYDD 52 (223)
T ss_dssp CCEEEEEECC----TTTTCTTSHHHHHHHHHHHHHHHHCCSSCEEEEEETTTS
T ss_pred cCEEEEEEeC----CCCCCCCChHHHHHHHHHHHHHHhCCCCCeEEEEECcCC
Confidence 5899999886 23 455544 455677777765 68 9998877653
No 236
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=43.09 E-value=22 Score=32.31 Aligned_cols=39 Identities=15% Similarity=0.075 Sum_probs=22.3
Q ss_pred CCCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCC--cEEEEEeCC
Q 044542 74 GPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARG--HEIHVFTAP 122 (465)
Q Consensus 74 ~~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~ 122 (465)
.|.+..|||++.. ..|+++. .+++.|.+.| ++|..+...
T Consensus 19 ~~~~~~~~vlVtG-------atG~iG~---~l~~~L~~~g~~~~v~~~~~~ 59 (346)
T 4egb_A 19 YFQSNAMNILVTG-------GAGFIGS---NFVHYMLQSYETYKIINFDAL 59 (346)
T ss_dssp -----CEEEEEET-------TTSHHHH---HHHHHHHHHCTTEEEEEEECC
T ss_pred ccccCCCeEEEEC-------CccHHHH---HHHHHHHhhCCCcEEEEEecc
Confidence 3445567888763 2355544 6788888999 555555443
No 237
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=42.89 E-value=28 Score=29.59 Aligned_cols=25 Identities=28% Similarity=0.356 Sum_probs=19.5
Q ss_pred CChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 95 PGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 95 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.||+++ .+++.|.++|++|.++...
T Consensus 16 sggiG~---~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 16 GKGIGR---DTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp TSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CchHHH---HHHHHHHHCCCEEEEEeCC
Confidence 477655 6888999999999887654
No 238
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=42.87 E-value=1.1e+02 Score=23.29 Aligned_cols=76 Identities=8% Similarity=0.019 Sum_probs=45.7
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH---cCCeEEecCCCCcce---eeeeeC-CceEEeCC-CHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH---CGRTVLTPNYPSIVR---TVVVNE-ELGYTFSP-NVKSFVEAL 418 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~s~~gg~~~---e~v~~~-~~G~l~~~-d~~~la~~i 418 (465)
++....+.. .|++++-..-++.-|..+++.+. ..+|+|........+ +.+..+ ..+++..| +.++|..+|
T Consensus 41 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~~l~kP~~~~~L~~~i 120 (154)
T 2rjn_A 41 LDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYADAQATIDAVNRGKISRFLLKPWEDEDVFKVV 120 (154)
T ss_dssp HHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGGHHHHHHHHHTTCCSEEEESSCCHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCCHHHHHHHHhccchheeeeCCCCHHHHHHHH
Confidence 455555443 57777643223344666666663 367877543222111 122334 67899999 999999999
Q ss_pred HHHHhC
Q 044542 419 ELVIRD 424 (465)
Q Consensus 419 ~~ll~~ 424 (465)
..++..
T Consensus 121 ~~~~~~ 126 (154)
T 2rjn_A 121 EKGLQL 126 (154)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998875
No 239
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=42.85 E-value=10 Score=35.10 Aligned_cols=43 Identities=9% Similarity=0.098 Sum_probs=28.3
Q ss_pred CceeEEEEeCCCCCCCCCChHH-HHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGME-RHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~-~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.+|||+++....- .. -... .....++++|.+.||+|..+....
T Consensus 2 ~~~~v~vl~gg~s--~E-~~vs~~s~~~v~~al~~~g~~v~~i~~~~ 45 (364)
T 2i87_A 2 TKENICIVFGGKS--AE-HEVSILTAQNVLNAIDKDKYHVDIIYITN 45 (364)
T ss_dssp -CEEEEEEEECSS--SC-HHHHHHHHHHHHHTSCTTTEEEEEEEECT
T ss_pred CCcEEEEEECCCC--cc-chhHHHHHHHHHHHHhhcCCEEEEEEEcC
Confidence 4689999985321 01 1111 245778999999999999987654
No 240
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=42.73 E-value=25 Score=29.35 Aligned_cols=33 Identities=30% Similarity=0.419 Sum_probs=23.4
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|||+++.. .|.+. ..+++.|.+.|++|.++...
T Consensus 1 m~i~iiGa-------~G~~G---~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGG-------TGNLG---KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcC-------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 68888731 24443 46788889999999988654
No 241
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=42.70 E-value=32 Score=26.00 Aligned_cols=67 Identities=12% Similarity=0.200 Sum_probs=42.8
Q ss_pred cCeEEecccCC-CCCcHHHHHHHHc-----CCeEEecCCCCcce---eeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 358 LDVFVNPTLRP-QGLDLTLIEAMHC-----GRTVLTPNYPSIVR---TVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 358 aDv~v~ps~~~-eg~~~~~~EAma~-----G~PvI~s~~gg~~~---e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
.|++++-..-+ +.-|..+++.+.. .+|+|........+ +.+..|..+++..| +.++|.++|.++++.
T Consensus 51 ~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~ 127 (140)
T 3lua_A 51 ITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIATKSDNPGYRHAALKFKVSDYILKPYPTKRLENSVRSVLKI 127 (140)
T ss_dssp CSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHHSCCSEEEESSCCTTHHHHHHHHHHCC
T ss_pred CcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHh
Confidence 57777643222 2335566666544 67877543222111 23455778899999 999999999999886
No 242
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=42.70 E-value=67 Score=26.12 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=32.0
Q ss_pred eeEEE-EeC-CCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 80 LKLAV-FSK-TWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 80 mkIl~-v~~-~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.++++ |.+ .|+..+...|...=+..|.+.|.+.|++|.+....
T Consensus 43 ~g~ALIInn~~f~~~~~R~G~~~Da~~L~~~f~~LgF~V~~~~dl 87 (178)
T 2h54_A 43 TRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVKKNL 87 (178)
T ss_dssp CCEEEEEECCCCSSSCCCTTHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEehhhcCCCccCCCCHHHHHHHHHHHHHCCCEEEEecCC
Confidence 35544 444 35443467788999999999999999999987653
No 243
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=42.68 E-value=55 Score=28.91 Aligned_cols=109 Identities=8% Similarity=0.045 Sum_probs=60.7
Q ss_pred HHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeee---------------------eC--CceEE
Q 044542 350 QLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVV---------------------NE--ELGYT 406 (465)
Q Consensus 350 ~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~---------------------~~--~~G~l 406 (465)
.-..-++.||++|.-...-|+|--.++++..-...++.....++. -+-. ++ ..-+.
T Consensus 41 ~d~~~l~~Adlvv~~G~~~E~w~~~~~~~~~~~~~~~v~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~dPH~W 119 (284)
T 2prs_A 41 SDVKRLQNADLVVWVGPEMEAFMQKPVSKLPGAKQVTIAQLEDVK-PLLMKSIHGDDDDHDHAEKSDEDHHHGDFNMHLW 119 (284)
T ss_dssp THHHHHHHCSEEEECCTTTCGGGHHHHHTSCGGGEEEGGGCTTTG-GGCCC---------------------CCCCCCGG
T ss_pred HHHHHHHcCCEEEEcCCCcHHHHHHHHHhcCCCCcEEEecCCCcc-cccccccccccccccccccccccCCCCCCCCccc
Confidence 344677899999986543377767777765433334444333331 1000 00 11123
Q ss_pred eCC-CHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcC
Q 044542 407 FSP-NVKSFVEALELVIR-DGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMKN 462 (465)
Q Consensus 407 ~~~-d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~ 462 (465)
.++ +...+++.|.+.+. -+|+......+++.++..+ ++.+-+++.+.+..+.+
T Consensus 120 ldp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~---L~~Ld~~~~~~l~~~~~ 174 (284)
T 2prs_A 120 LSPEIARATAVAIHGKLVELMPQSRAKLDANLKDFEAQ---LASTETQVGNELAPLKG 174 (284)
T ss_dssp GCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH---HHHHHHHHHHHHGGGTT
T ss_pred CCHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH---HHHHHHHHHHHHhcCCC
Confidence 344 55566666665554 1366677777787777665 56666677666665543
No 244
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=42.39 E-value=25 Score=31.58 Aligned_cols=34 Identities=15% Similarity=0.174 Sum_probs=23.8
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|||++.. ..|+++ ..+++.|.+.||+|.++....
T Consensus 2 ~~ilVtG-------atG~iG---~~l~~~L~~~g~~V~~~~r~~ 35 (330)
T 2c20_A 2 NSILICG-------GAGYIG---SHAVKKLVDEGLSVVVVDNLQ 35 (330)
T ss_dssp CEEEEET-------TTSHHH---HHHHHHHHHTTCEEEEEECCS
T ss_pred CEEEEEC-------CCcHHH---HHHHHHHHhCCCEEEEEeCCC
Confidence 5676653 236654 467888899999999987543
No 245
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=42.36 E-value=47 Score=28.50 Aligned_cols=40 Identities=15% Similarity=0.221 Sum_probs=30.8
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|||+.|+.. ...-|-...+.+|+.+|+++|+.|.++-.+.
T Consensus 2 ~~vi~v~s~----kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSG----KGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECS----STTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECC----CCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 466666653 2334667889999999999999999988765
No 246
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=41.78 E-value=16 Score=34.12 Aligned_cols=33 Identities=18% Similarity=0.479 Sum_probs=24.4
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.|||+||... ..| ..++..|+++|++|+|+-..
T Consensus 1 sm~V~IVGaG------paG-----l~~A~~L~~~G~~v~v~Er~ 33 (412)
T 4hb9_A 1 SMHVGIIGAG------IGG-----TCLAHGLRKHGIKVTIYERN 33 (412)
T ss_dssp CCEEEEECCS------HHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECcC------HHH-----HHHHHHHHhCCCCEEEEecC
Confidence 3899999532 234 36778899999999999543
No 247
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=41.77 E-value=18 Score=32.39 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=23.3
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTA 121 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 121 (465)
.|||+++. ..|+.+ ..+++.|.+.||+|.++..
T Consensus 3 ~~~ilVtG-------atG~iG---~~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 3 KQRVFIAG-------HRGMVG---SAIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp CEEEEEET-------TTSHHH---HHHHHHHTTCTTEEEECCC
T ss_pred CCEEEEEC-------CCcHHH---HHHHHHHHhCCCeEEEEec
Confidence 47887763 235554 4678889999999887653
No 248
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=41.70 E-value=1e+02 Score=23.00 Aligned_cols=75 Identities=16% Similarity=0.224 Sum_probs=44.4
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH---cCCeEEec-CCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH---CGRTVLTP-NYPSIV--RTVVVNEELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~ 419 (465)
++....+.. .|++++-. .++.-|..+++.+. .++|+|.. ...... .+....|..+++..| +.++|.+.|.
T Consensus 38 ~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~ 116 (142)
T 2qxy_A 38 QEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGAVDYILKPFRLDYLLERVK 116 (142)
T ss_dssp HHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTCSCEEESSCCHHHHHHHHH
T ss_pred HHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCcceeEeCCCCHHHHHHHHH
Confidence 444444433 56766633 22323445555543 35777753 322211 123345677899999 9999999999
Q ss_pred HHHhC
Q 044542 420 LVIRD 424 (465)
Q Consensus 420 ~ll~~ 424 (465)
+++..
T Consensus 117 ~~~~~ 121 (142)
T 2qxy_A 117 KIISS 121 (142)
T ss_dssp HHHHC
T ss_pred HHHhh
Confidence 99886
No 249
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=41.54 E-value=27 Score=31.14 Aligned_cols=44 Identities=11% Similarity=0.048 Sum_probs=28.5
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.+|||+++..... ....-.-.....++++|.+.||+|..+....
T Consensus 2 ~~m~v~vl~gg~s--~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~ 45 (307)
T 3r5x_A 2 NAMRIGVIMGGVS--SEKQVSIMTGNEMIANLDKNKYEIVPITLNE 45 (307)
T ss_dssp CCEEEEEEECCSH--HHHHHHHHHHHHHHHHSCTTTEEEEEEECSS
T ss_pred CCcEEEEEeCCCC--cchHhHHHHHHHHHHHHHHCCCEEEEEcccC
Confidence 4689999974210 0000112336688899999999999988753
No 250
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=41.33 E-value=38 Score=27.88 Aligned_cols=39 Identities=5% Similarity=0.114 Sum_probs=25.3
Q ss_pred ceeEEEEeCCCCCCCCCChHH-HHHHHHHHHHHhCCcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGME-RHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~-~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+|||++|..+ +..+|.. ..+..+++.+. .|++|.++...
T Consensus 2 M~kilii~gS----~r~~s~t~~la~~~~~~~~-~~~~v~~~dl~ 41 (192)
T 3fvw_A 2 SKRILFIVGS----FSEGSFNRQLAKKAETIIG-DRAQVSYLSYD 41 (192)
T ss_dssp -CEEEEEESC----CSTTCHHHHHHHHHHHHHT-TSSEEEECCCS
T ss_pred CCEEEEEEcC----CCCCCHHHHHHHHHHHhcC-CCCEEEEEeCc
Confidence 3699999876 3445554 44555566664 68998887655
No 251
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=41.20 E-value=47 Score=28.73 Aligned_cols=42 Identities=12% Similarity=0.026 Sum_probs=30.6
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDR 125 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 125 (465)
|||+.|+.. ...-|-...+.+|+.+|++.|.+|.++-.+...
T Consensus 18 ~~vI~v~s~----kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 18 KSRIAVMSG----KGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp SCEEEEECS----SSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CeEEEEEcC----CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 466655543 233466678899999999999999998776543
No 252
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=41.13 E-value=98 Score=22.27 Aligned_cols=75 Identities=11% Similarity=-0.036 Sum_probs=47.4
Q ss_pred hHHHHHHH--hcCeEEecccCC-CCCcHHHHHHHH-----cCCeEEecCCCCcce---eeeeeCCceEEeCC-CHHHHHH
Q 044542 349 HQLSEFYN--ALDVFVNPTLRP-QGLDLTLIEAMH-----CGRTVLTPNYPSIVR---TVVVNEELGYTFSP-NVKSFVE 416 (465)
Q Consensus 349 ~~~~~~~~--~aDv~v~ps~~~-eg~~~~~~EAma-----~G~PvI~s~~gg~~~---e~v~~~~~G~l~~~-d~~~la~ 416 (465)
++....+. ..|++++-...+ +.-|..+++.+. ..+|+|.. .....+ +....+..+++..| +.+++.+
T Consensus 39 ~~a~~~~~~~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~-~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~ 117 (127)
T 2gkg_A 39 KGSVEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVII-GNPDGFAQHRKLKAHADEYVAKPVDADQLVE 117 (127)
T ss_dssp HHHHHHHHHHCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEE-ECGGGHHHHHHSTTCCSEEEESSCCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEE-ecCCchhHHHHHHhCcchheeCCCCHHHHHH
Confidence 44444443 357777633222 334567777774 46788876 332221 23445667899999 9999999
Q ss_pred HHHHHHhC
Q 044542 417 ALELVIRD 424 (465)
Q Consensus 417 ~i~~ll~~ 424 (465)
.+.+++..
T Consensus 118 ~i~~~~~~ 125 (127)
T 2gkg_A 118 RAGALIGF 125 (127)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHcC
Confidence 99998765
No 253
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=40.89 E-value=95 Score=22.04 Aligned_cols=74 Identities=9% Similarity=0.126 Sum_probs=43.7
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH---cCCeEEe-cCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH---CGRTVLT-PNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELV 421 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~-s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~l 421 (465)
++....+.. .|++++-..-++.-|..+++.+. ...|+|. +..+....+....+..+++..| +.+++..++.++
T Consensus 35 ~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~ 114 (116)
T 3a10_A 35 EEALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAYSHYRSDMSSWAADEYVVKSFNFDELKEKVKKL 114 (116)
T ss_dssp HHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCGGGGGCGGGGGSSEEEECCSSTHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECCcchHHHHHhccccceEECCCCHHHHHHHHHHH
Confidence 444444443 57777633222344666676664 3567764 3322221133445677899999 999999988876
Q ss_pred H
Q 044542 422 I 422 (465)
Q Consensus 422 l 422 (465)
+
T Consensus 115 ~ 115 (116)
T 3a10_A 115 L 115 (116)
T ss_dssp T
T ss_pred h
Confidence 4
No 254
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=40.73 E-value=46 Score=28.11 Aligned_cols=40 Identities=15% Similarity=0.166 Sum_probs=30.0
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
||++.|+.. ...-|-...+.+|+.+|+++|++|.++-...
T Consensus 2 ~~~i~v~s~----kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 2 GRIISIVSG----KGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CEEEEEECS----STTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred ceEEEEecC----CCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 466666543 2334667789999999999999999997765
No 255
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=40.73 E-value=1.7e+02 Score=24.77 Aligned_cols=132 Identities=8% Similarity=0.016 Sum_probs=63.4
Q ss_pred HHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc--CCeEEc-CCCChhHHHHHHHhcCeEEecccCCCCCcHHHHHHHHc
Q 044542 305 LYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG--QNVKVL-GALEAHQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHC 381 (465)
Q Consensus 305 ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~--~~V~~~-g~v~~~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~ 381 (465)
....+..|.+.+ ..+.++... ..+.++++. ..+.+. +....++ +..+|+++..+-. +.....+.++...
T Consensus 43 a~~ka~~Ll~~G--A~VtVvap~-~~~~l~~l~~~~~i~~i~~~~~~~d----L~~adLVIaAT~d-~~~N~~I~~~ak~ 114 (223)
T 3dfz_A 43 ATRRIKGFLQEG--AAITVVAPT-VSAEINEWEAKGQLRVKRKKVGEED----LLNVFFIVVATND-QAVNKFVKQHIKN 114 (223)
T ss_dssp HHHHHHHHGGGC--CCEEEECSS-CCHHHHHHHHTTSCEEECSCCCGGG----SSSCSEEEECCCC-THHHHHHHHHSCT
T ss_pred HHHHHHHHHHCC--CEEEEECCC-CCHHHHHHHHcCCcEEEECCCCHhH----hCCCCEEEECCCC-HHHHHHHHHHHhC
Confidence 344455565543 455666543 233455543 445554 3443333 5679998876533 3344455555558
Q ss_pred CCeEEecCCCCcce----eeeeeCCceEEeCC--CHHHHHHHHHHHHh----CChHHHHHHHHHHHHHHHhhC
Q 044542 382 GRTVLTPNYPSIVR----TVVVNEELGYTFSP--NVKSFVEALELVIR----DGPKVLQRKGLACKEHALSMF 444 (465)
Q Consensus 382 G~PvI~s~~gg~~~----e~v~~~~~G~l~~~--d~~~la~~i~~ll~----~~~~~~~~~~~~~~~~~~~~f 444 (465)
|+||-..|.+.... .++..+..-+-+.. ..-.++..|.+-+. ..-..+.+.....|+.+++.+
T Consensus 115 gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~~lp~~~~~~~~~~~~~R~~vk~~~ 187 (223)
T 3dfz_A 115 DQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSSNYDESYTQYTQFLYECRVLIHRLN 187 (223)
T ss_dssp TCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHC
Confidence 99998888765441 34445544444433 23344444444333 211233333444555555543
No 256
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=40.70 E-value=23 Score=31.06 Aligned_cols=34 Identities=29% Similarity=0.267 Sum_probs=25.1
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|||+++. . |..+. .+++.|.++||+|++++...
T Consensus 5 ~~~ilVtG-------a-G~iG~---~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFG-------H-GYTAR---VLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEET-------C-CHHHH---HHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEEC-------C-cHHHH---HHHHHHHHCCCEEEEEEcCh
Confidence 36888762 3 55544 67889999999999998654
No 257
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=40.52 E-value=36 Score=26.69 Aligned_cols=37 Identities=16% Similarity=0.296 Sum_probs=26.0
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
....|+|+++.. |.. -..+++.|.+.|++|.++....
T Consensus 16 ~~~~~~v~IiG~--------G~i---G~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 16 KQKSKYIVIFGC--------GRL---GSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp -CCCCEEEEECC--------SHH---HHHHHHHHHHTTCEEEEEESCG
T ss_pred ccCCCcEEEECC--------CHH---HHHHHHHHHhCCCeEEEEECCH
Confidence 445679998842 444 3467888889999999987654
No 258
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=40.45 E-value=37 Score=29.29 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=31.0
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTA 121 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 121 (465)
+||.++|+.. ...-|-......|+++|+++|.+|..+=+
T Consensus 20 m~k~i~ItgT----~t~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 20 QGHMLFISAT----NTNAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp CCEEEEEEES----STTSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred cCcEEEEEeC----CCCCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 4588888764 24467778889999999999999988854
No 259
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=40.32 E-value=37 Score=28.85 Aligned_cols=42 Identities=12% Similarity=0.070 Sum_probs=31.7
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-CcEEEEEeCCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GHEIHVFTAPSD 124 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~ 124 (465)
+|||+.|+.. ...-|-...+.+|+.+|++. |+.|.++-.+..
T Consensus 3 ~~~vI~v~s~----kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 3 AKRVFGFVSA----KGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CCEEEEEEES----STTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCeEEEEECC----CCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 5676666653 23456677889999999999 999999987654
No 260
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=40.30 E-value=34 Score=30.54 Aligned_cols=46 Identities=13% Similarity=0.076 Sum_probs=34.0
Q ss_pred CCCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 74 GPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 74 ~~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.+..+++|++.|+..- ..-|-...+.+|+..|++.|..|.++-.+.
T Consensus 98 ~~~~~~~kvI~vts~k----gG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 98 AMMETENNILMITGAT----PDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp HTSSCSCCEEEEEESS----SSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred hccCCCCeEEEEECCC----CCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3344566777777542 235677889999999999999999987665
No 261
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=40.19 E-value=27 Score=31.16 Aligned_cols=33 Identities=21% Similarity=0.294 Sum_probs=24.5
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|||+++.. .|+.+ ..+++.|.+.|++|.+++..
T Consensus 3 ~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 3 LKIAVTGG-------TGFLG---QYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-------CcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 57777632 35554 46788999999999999876
No 262
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=40.17 E-value=1.1e+02 Score=22.77 Aligned_cols=76 Identities=8% Similarity=0.003 Sum_probs=47.7
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHHc-----CCeEEecCCCCcce---eeeeeCCceEEeCC--CHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMHC-----GRTVLTPNYPSIVR---TVVVNEELGYTFSP--NVKSFVE 416 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma~-----G~PvI~s~~gg~~~---e~v~~~~~G~l~~~--d~~~la~ 416 (465)
++....+.. .|++++-..-++.-|..+++.+.. ++|+|........+ +.+..|..+++..+ +.++|.+
T Consensus 41 ~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~l~~ 120 (144)
T 3kht_A 41 AKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDFYG 120 (144)
T ss_dssp HHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEEECCTTSHHHHHH
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHHHHH
Confidence 555555543 577777432234456778887764 57787543222221 23445677888887 7999999
Q ss_pred HHHHHHhC
Q 044542 417 ALELVIRD 424 (465)
Q Consensus 417 ~i~~ll~~ 424 (465)
+|.++++.
T Consensus 121 ~i~~~l~~ 128 (144)
T 3kht_A 121 RIYAIFSY 128 (144)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 263
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=40.11 E-value=20 Score=32.68 Aligned_cols=43 Identities=9% Similarity=0.101 Sum_probs=28.3
Q ss_pred CceeEEEEeCCCCCCCCCChHH-HHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGME-RHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~-~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.+|||+++....- .. .... .....++++|.+.||+|.++....
T Consensus 2 ~~~~v~vl~gG~s--~E-~~vs~~s~~~v~~al~~~g~~v~~i~~~~ 45 (343)
T 1e4e_A 2 NRIKVAILFGGCS--EE-HDVSVKSAIEIAANINKEKYEPLYIGITK 45 (343)
T ss_dssp CCEEEEEEEECSS--TT-HHHHHHHHHHHHHHSCTTTEEEEEEEECT
T ss_pred CCcEEEEEeCCCC--CC-cchhHHHHHHHHHHhhhcCCEEEEEEEcC
Confidence 3689999975320 00 0111 145678999999999999987654
No 264
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=40.04 E-value=17 Score=27.58 Aligned_cols=73 Identities=7% Similarity=0.005 Sum_probs=46.2
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHH-HcCCeEEe-cCCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAM-HCGRTVLT-PNYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVI 422 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAm-a~G~PvI~-s~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll 422 (465)
++..++++. -|++++=-.-++.-|..+++.+ ..++|||. |..+... .....+..+++..| ++++|.++|.++.
T Consensus 43 ~eAl~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa~~~~~-~~~~~g~~~yl~KP~~~~~L~~~l~~~~ 120 (123)
T 2lpm_A 43 QEALDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATGYGSKG-LDTRYSNIPLLTKPFLDSELEAVLVQIS 120 (123)
T ss_dssp HHHHHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCTTCTTS-CCSSSCSCSCBCSSSSHHHHHHHHSTTC
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEecCccHH-HHHhCCCCcEEECCCCHHHHHHHHHHHH
Confidence 555555544 5787773323445567777777 45789874 3333221 22344667899999 9999999887664
No 265
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=40.00 E-value=16 Score=32.88 Aligned_cols=34 Identities=26% Similarity=0.453 Sum_probs=23.8
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
+|+++.. .|+.++ .+++.|.+.||+|.+++....
T Consensus 13 ~ilVtGa-------tG~iG~---~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 13 KILIFGG-------TGYIGN---HMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CEEEETT-------TSTTHH---HHHHHHHHTTCCEEEEECTTC
T ss_pred eEEEECC-------CchHHH---HHHHHHHHCCCcEEEEECCCC
Confidence 6776642 255443 577888899999999887653
No 266
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=39.46 E-value=37 Score=30.13 Aligned_cols=49 Identities=8% Similarity=0.089 Sum_probs=35.4
Q ss_pred ccCCCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 72 CFGPTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 72 ~~~~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
.+.+..+++|++.|+..- ..-|-...+.+|+..|++.|..|.++-.+..
T Consensus 84 ~~~~~~~~~kvI~vts~k----gG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 84 HFAMMQAQNNVLMMTGVS----PSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp HHHSTTTTCCEEEEEESS----SSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred hhhccCCCCeEEEEECCC----CCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 333344456777776542 3357778899999999999999999977654
No 267
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=39.43 E-value=1.1e+02 Score=22.55 Aligned_cols=65 Identities=12% Similarity=0.181 Sum_probs=40.3
Q ss_pred cCeEEecccCCCCCcHHHHHHHHc---CCeEEec--CCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 358 LDVFVNPTLRPQGLDLTLIEAMHC---GRTVLTP--NYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 358 aDv~v~ps~~~eg~~~~~~EAma~---G~PvI~s--~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
.|++++-...++.-|..+++.+.. ++|+|.. ...... . ...-..+++..+ +.++|...+..++..
T Consensus 61 ~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~-~-~~~~~~~~l~KP~~~~~L~~~i~~~~~~ 131 (138)
T 2b4a_A 61 CDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILTTGRHELI-E-SSEHNLSYLQKPFAISELRAAIDYHKPS 131 (138)
T ss_dssp CSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEESCC--CC-C-CSSSCEEEEESSCCHHHHHHHHHHTCCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCCCHH-H-HHHHHHheeeCCCCHHHHHHHHHHHHHh
Confidence 577776432234456777877754 5777753 322211 1 111156888899 999999999988765
No 268
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=39.33 E-value=26 Score=31.97 Aligned_cols=89 Identities=16% Similarity=0.154 Sum_probs=50.1
Q ss_pred EEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcC--Ce-EEcCCCChhHHHHHHHh--cCeEE
Q 044542 288 LVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQ--NV-KVLGALEAHQLSEFYNA--LDVFV 362 (465)
Q Consensus 288 ~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~--~V-~~~g~v~~~~~~~~~~~--aDv~v 362 (465)
+.++.+|--.- |....+.++... |+++++-+.+.. .+..+++++ .+ .. ..++.++++. .|+++
T Consensus 24 irigiIG~G~i--g~~~~~~~~~~~----~~~~lvav~d~~-~~~a~~~a~~~g~~~~-----y~d~~ell~~~~iDaV~ 91 (350)
T 4had_A 24 LRFGIISTAKI--GRDNVVPAIQDA----ENCVVTAIASRD-LTRAREMADRFSVPHA-----FGSYEEMLASDVIDAVY 91 (350)
T ss_dssp EEEEEESCCHH--HHHTHHHHHHHC----SSEEEEEEECSS-HHHHHHHHHHHTCSEE-----ESSHHHHHHCSSCSEEE
T ss_pred cEEEEEcChHH--HHHHHHHHHHhC----CCeEEEEEECCC-HHHHHHHHHHcCCCee-----eCCHHHHhcCCCCCEEE
Confidence 77878874211 112234555544 788888666532 333333221 11 11 2456677765 68888
Q ss_pred ecccCCCCCcHHHHHHHHcCCeEEecC
Q 044542 363 NPTLRPQGLDLTLIEAMHCGRTVLTPN 389 (465)
Q Consensus 363 ~ps~~~eg~~~~~~EAma~G~PvI~s~ 389 (465)
..+.. ..-.-.+.+|+.+|++|++=+
T Consensus 92 I~tP~-~~H~~~~~~al~aGkhVl~EK 117 (350)
T 4had_A 92 IPLPT-SQHIEWSIKAADAGKHVVCEK 117 (350)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEEECS
T ss_pred EeCCC-chhHHHHHHHHhcCCEEEEeC
Confidence 86543 222346688999999999854
No 269
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=39.31 E-value=19 Score=30.55 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=24.1
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
||+++|+. ..||+++ .+++.|.++|++|.++...
T Consensus 1 Mk~vlVTG------as~gIG~---~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITG------ASSGLGA---ELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEES------TTSHHHH---HHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEec------CCchHHH---HHHHHHHHCCCEEEEEeCC
Confidence 67777764 3477754 6888999999998888654
No 270
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=39.07 E-value=28 Score=26.72 Aligned_cols=23 Identities=17% Similarity=0.254 Sum_probs=18.6
Q ss_pred HHHHHHHHHHhCCcEEEEEeCCC
Q 044542 101 HASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 101 ~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.-..+++.|.+.|++|.++....
T Consensus 17 iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 17 AGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCH
T ss_pred HHHHHHHHHHHCCCeEEEEECCH
Confidence 45678899999999999987643
No 271
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=38.79 E-value=21 Score=29.26 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=27.7
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
||++.... |........+++.|.+.|++|+++.+...
T Consensus 4 ~IllgvTG-------s~aa~k~~~l~~~L~~~g~~V~vv~T~~A 40 (181)
T 1g63_A 4 KLLICATA-------SINVININHYIVELKQHFDEVNILFSPSS 40 (181)
T ss_dssp CEEEEECS-------CGGGGGHHHHHHHHTTTSSCEEEEECGGG
T ss_pred EEEEEEEC-------HHHHHHHHHHHHHHHHCCCEEEEEEchhH
Confidence 67777653 22234678999999999999999987754
No 272
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=38.78 E-value=35 Score=25.53 Aligned_cols=36 Identities=11% Similarity=0.015 Sum_probs=24.2
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTA 121 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 121 (465)
...+|||+++... ......+...|.+.|++|..+..
T Consensus 4 ~~~~~~ilivdd~----------~~~~~~l~~~L~~~~~~v~~~~~ 39 (137)
T 3hdg_A 4 REVALKILIVEDD----------TDAREWLSTIISNHFPEVWSAGD 39 (137)
T ss_dssp ---CCCEEEECSC----------HHHHHHHHHHHHTTCSCEEEESS
T ss_pred cccccEEEEEeCC----------HHHHHHHHHHHHhcCcEEEEECC
Confidence 3456899999765 34566777888888887766553
No 273
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=38.76 E-value=27 Score=31.19 Aligned_cols=33 Identities=18% Similarity=0.297 Sum_probs=23.8
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+||++|. |.+..-..++..|.+.|++|.++...
T Consensus 22 ~~I~iIG----------g~G~mG~~la~~l~~~G~~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVG----------GYGKLGGLFARYLRASGYPISILDRE 54 (298)
T ss_dssp CCEEEET----------TTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred CEEEEEc----------CCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 5899983 22334457889999999999888543
No 274
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=38.66 E-value=23 Score=31.66 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=23.8
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+|||+++.. |.++ ..++..|.+.||+|+++...
T Consensus 3 ~m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGA--------GAMG---SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECc--------CHHH---HHHHHHHHhCCCcEEEEECC
Confidence 479999843 4443 35778888999999988654
No 275
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=38.45 E-value=1.3e+02 Score=22.85 Aligned_cols=67 Identities=16% Similarity=0.203 Sum_probs=42.7
Q ss_pred cCeEEecccCCCCCcHHHHHHHH---cCCeEEecCCCCcce---eeeeeC-CceEEeCC-CHHHHHHHHHHHHhC
Q 044542 358 LDVFVNPTLRPQGLDLTLIEAMH---CGRTVLTPNYPSIVR---TVVVNE-ELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 358 aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~s~~gg~~~---e~v~~~-~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
.|++++-...++.-|..+++.+. ..+|+|........+ +.+..+ ..+++..| +.++|..+|.+++..
T Consensus 59 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~l~~~i~~~l~~ 133 (153)
T 3hv2_A 59 VDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYLSKPWDDQELLLALRQALEH 133 (153)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTCCSEEECSSCCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCCCcceEEeCCCCHHHHHHHHHHHHHH
Confidence 47777643333455666766664 367877543322221 223445 57899999 999999999999875
No 276
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=38.34 E-value=50 Score=30.58 Aligned_cols=37 Identities=11% Similarity=0.207 Sum_probs=26.6
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
...++|+++.. |+. ...+++++++.|++|.++.+...
T Consensus 10 ~~~~~IlIlG~--------G~l---g~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 10 KFGATIGIIGG--------GQL---GKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp CTTCEEEEECC--------SHH---HHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCCEEEEECC--------CHH---HHHHHHHHHHCCCEEEEEECCCC
Confidence 34558888742 333 56788999999999999976543
No 277
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=38.25 E-value=1.1e+02 Score=27.64 Aligned_cols=104 Identities=8% Similarity=-0.024 Sum_probs=61.1
Q ss_pred hHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeee--e------CCceEEeCC-CHHHHHHHHH
Q 044542 349 HQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVV--N------EELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 349 ~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~--~------~~~G~l~~~-d~~~la~~i~ 419 (465)
..-..-++.||++|.-...-|+|--.++++.. +.++|.... ++. .+. + .+.-+..++ +...+++.|.
T Consensus 86 p~d~~~l~~ADlvv~nG~~lE~wl~k~~~~~~-~~~~v~~s~-gi~--~~~~~~~~~~~~~DPHvWldp~n~~~~a~~I~ 161 (321)
T 1xvl_A 86 PSDIVKAQDADLILYNGMNLERWFEQFLGNVK-DVPSVVLTE-GIE--PIPIADGPYTDKPNPHAWMSPRNALVYVENIR 161 (321)
T ss_dssp HHHHHHHHTCSEEEECCTTSSTTHHHHHHTSS-SCCEEETTT-TCC--CCBCCSSSSTTSBCCCGGGSHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCEEEECCCChHHHHHHHHHhcC-CCcEEEccC-Ccc--cccccccCCCCCCCCCcCCCHHHHHHHHHHHH
Confidence 34456789999999865434777777787766 666664432 221 111 0 112234444 5566666666
Q ss_pred HHHh-CChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 044542 420 LVIR-DGPKVLQRKGLACKEHALSMFTATKMASAYERFFLR 459 (465)
Q Consensus 420 ~ll~-~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 459 (465)
+.+. -+|+......+++.++..+ ++..-+++.+.+..
T Consensus 162 ~~L~~~DP~~a~~Y~~Na~~~~~~---L~~Ld~~~~~~l~~ 199 (321)
T 1xvl_A 162 QAFVELDPDNAKYYNANAAVYSEQ---LKAIDRQLGADLEQ 199 (321)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHH---HHHHHHHHHHHHTT
T ss_pred HHHHHHCcccHHHHHHHHHHHHHH---HHHHHHHHHHHHhh
Confidence 5554 1266667777777777655 45666666655554
No 278
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=38.04 E-value=19 Score=30.48 Aligned_cols=96 Identities=10% Similarity=0.065 Sum_probs=49.4
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC--CcEEEEEeCCCCCCCCCc-ccCCcceEEEe-ecCCC--------
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR--GHEIHVFTAPSDRKPHND-VHQGNLHVHFA-ANDHG-------- 146 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~-~~~~~~~v~~~-~~~~~-------- 146 (465)
+|||+++... + ...+..+.+++.+. +++|..+.+...+....+ ....+..+... .....
T Consensus 3 m~ki~vl~sG-------~--g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~ 73 (212)
T 3av3_A 3 MKRLAVFASG-------S--GTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYPSKAAFESE 73 (212)
T ss_dssp CEEEEEECCS-------S--CHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHH
T ss_pred CcEEEEEEEC-------C--cHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcccccchhhhHHH
Confidence 3688888642 1 22566778888776 688876665543322111 12223333332 21111
Q ss_pred ccccCCCCCCcEEEecCCc--hhHHhhhcCCcEEEEecc
Q 044542 147 SVNLNNDGAFDYVHTESVS--LPHWRAKMVPNVAVTWHG 183 (465)
Q Consensus 147 ~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 183 (465)
.....+..+||+|++-.+. ++..+-...+.-++.+|.
T Consensus 74 ~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 112 (212)
T 3av3_A 74 ILRELKGRQIDWIALAGYMRLIGPTLLSAYEGKIVNIHP 112 (212)
T ss_dssp HHHHHHHTTCCEEEESSCCSCCCHHHHHHTTTCEEEEES
T ss_pred HHHHHHhcCCCEEEEchhhhhCCHHHHhhhcCCEEEEec
Confidence 1111257799999987652 222222222335778885
No 279
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=37.89 E-value=50 Score=30.58 Aligned_cols=38 Identities=11% Similarity=0.110 Sum_probs=27.8
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
...+|||+++.. | .....+++++++.|++|.++.....
T Consensus 8 ~~~~~~ili~g~--------g---~~~~~~~~a~~~~G~~v~~~~~~~~ 45 (391)
T 1kjq_A 8 RPAATRVMLLGS--------G---ELGKEVAIECQRLGVEVIAVDRYAD 45 (391)
T ss_dssp STTCCEEEEESC--------S---HHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCEEEEECC--------C---HHHHHHHHHHHHcCCEEEEEECCCC
Confidence 345679999842 2 1346789999999999998877653
No 280
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=37.88 E-value=30 Score=30.20 Aligned_cols=37 Identities=14% Similarity=0.217 Sum_probs=26.5
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.++|+++|+. ..||+++ .+++.|.+.|++|.+.....
T Consensus 24 ~~~k~vlITG------as~gIG~---a~a~~l~~~G~~V~~~~~~~ 60 (272)
T 4e3z_A 24 SDTPVVLVTG------GSRGIGA---AVCRLAARQGWRVGVNYAAN 60 (272)
T ss_dssp CCSCEEEETT------TTSHHHH---HHHHHHHHTTCEEEEEESSC
T ss_pred cCCCEEEEEC------CCchHHH---HHHHHHHHCCCEEEEEcCCC
Confidence 3457777774 3467654 78899999999998775443
No 281
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=37.76 E-value=1.1e+02 Score=22.07 Aligned_cols=75 Identities=15% Similarity=0.160 Sum_probs=46.6
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHHc-----CCeEEe-cCCCCcc--eeeeeeCCceEEeCC-CHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMHC-----GRTVLT-PNYPSIV--RTVVVNEELGYTFSP-NVKSFVEA 417 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma~-----G~PvI~-s~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~ 417 (465)
++....+.. .|++++-..-++.-|..+++.+.. .+|+|. |...... .+.+..|..+++..| +.+++.++
T Consensus 39 ~~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~ 118 (128)
T 1jbe_A 39 VDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEK 118 (128)
T ss_dssp HHHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCccHHHHHHHHHhCcCceeecCCCHHHHHHH
Confidence 455455543 577776432234456778887764 467764 3322211 123445678999999 99999999
Q ss_pred HHHHHh
Q 044542 418 LELVIR 423 (465)
Q Consensus 418 i~~ll~ 423 (465)
+.+++.
T Consensus 119 i~~~~~ 124 (128)
T 1jbe_A 119 LNKIFE 124 (128)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988764
No 282
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=37.75 E-value=81 Score=23.37 Aligned_cols=66 Identities=11% Similarity=0.120 Sum_probs=40.1
Q ss_pred CeEEecccCCCCCcHHHHHHHH--c-----CC-eEE-ecCCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 359 DVFVNPTLRPQGLDLTLIEAMH--C-----GR-TVL-TPNYPSIV--RTVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 359 Dv~v~ps~~~eg~~~~~~EAma--~-----G~-PvI-~s~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
|++++-..-++.-|..+++.+. . .. |+| .|...... .+....|..+++..| +.+++.+++.+++..
T Consensus 52 dlvllD~~lp~~~g~~~~~~l~~~~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~~~~~ 129 (136)
T 1dcf_A 52 KVVFMDVCMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCMSFGLDGVLLKPVSLDNIRDVLSDLLEP 129 (136)
T ss_dssp SEEEEECCSSTTTTTHHHHHHHHHHC-CCSCCCEEEEEESCCSHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhhhhccCCCceEEEEeCCCCHHHHHHHHHcCCCeEEECCCCHHHHHHHHHHHhch
Confidence 7777632222334556666664 1 23 354 44443321 123345778999999 999999999988765
No 283
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=37.73 E-value=46 Score=26.57 Aligned_cols=36 Identities=19% Similarity=0.200 Sum_probs=26.3
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+|||++-+.. +|.+. =..+.+.|.+.||+|.=+...
T Consensus 3 ~MkIaigsDh-------aG~~l-K~~i~~~L~~~G~eV~D~G~~ 38 (162)
T 2vvp_A 3 GMRVYLGADH-------AGYEL-KQRIIEHLKQTGHEPIDCGAL 38 (162)
T ss_dssp CCEEEEEECH-------HHHHH-HHHHHHHHHHTTCEEEECSCC
T ss_pred CCEEEEEeCc-------hhHHH-HHHHHHHHHHCCCEEEEeCCC
Confidence 4899887753 55443 456888999999998877654
No 284
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=37.69 E-value=35 Score=31.37 Aligned_cols=92 Identities=14% Similarity=0.069 Sum_probs=49.3
Q ss_pred EEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHhc--CeEEecc
Q 044542 288 LVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNAL--DVFVNPT 365 (465)
Q Consensus 288 ~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~a--Dv~v~ps 365 (465)
+.++++|--.- |...++.++... ++++++-+-+ ...+..+++.+.. -+..-..++.++++.. |+++..+
T Consensus 6 ~rigiIG~G~~--g~~~~~~~l~~~----~~~~l~av~d-~~~~~~~~~a~~~--~~~~~~~~~~~ll~~~~vD~V~i~t 76 (359)
T 3m2t_A 6 IKVGLVGIGAQ--MQENLLPSLLQM----QDIRIVAACD-SDLERARRVHRFI--SDIPVLDNVPAMLNQVPLDAVVMAG 76 (359)
T ss_dssp EEEEEECCSHH--HHHTHHHHHHTC----TTEEEEEEEC-SSHHHHGGGGGTS--CSCCEESSHHHHHHHSCCSEEEECS
T ss_pred ceEEEECCCHH--HHHHHHHHHHhC----CCcEEEEEEc-CCHHHHHHHHHhc--CCCcccCCHHHHhcCCCCCEEEEcC
Confidence 56666764221 111234554443 6788774443 2334444443221 0101124677777765 8888755
Q ss_pred cCCCCCcHHHHHHHHcCCeEEecC
Q 044542 366 LRPQGLDLTLIEAMHCGRTVLTPN 389 (465)
Q Consensus 366 ~~~eg~~~~~~EAma~G~PvI~s~ 389 (465)
.. ..-.-.+.+|+..|++|++-+
T Consensus 77 p~-~~H~~~~~~al~aGkhVl~EK 99 (359)
T 3m2t_A 77 PP-QLHFEMGLLAMSKGVNVFVEK 99 (359)
T ss_dssp CH-HHHHHHHHHHHHTTCEEEECS
T ss_pred Cc-HHHHHHHHHHHHCCCeEEEEC
Confidence 32 222335678999999999854
No 285
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=37.60 E-value=22 Score=32.05 Aligned_cols=33 Identities=18% Similarity=0.357 Sum_probs=26.6
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|||+++.. | ....+++++.+.|++|.++....
T Consensus 2 ~m~Ililg~---------g---~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYAS---------H---SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESS---------T---THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECC---------h---hHHHHHHHHHhCCCEEEEEECCC
Confidence 579999863 2 45688999999999999988764
No 286
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=37.56 E-value=22 Score=32.83 Aligned_cols=32 Identities=25% Similarity=0.388 Sum_probs=23.4
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|||++|.. |.++ ..++..|.+.||+|+++...
T Consensus 16 ~kI~iIG~--------G~mG---~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 16 NKAVVFGS--------GAFG---TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEEECC--------SHHH---HHHHHHHTTTEEEEEEECSC
T ss_pred CeEEEECC--------CHHH---HHHHHHHHhCCCEEEEEECC
Confidence 39999853 4433 35788888999999988654
No 287
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=37.55 E-value=1.3e+02 Score=22.53 Aligned_cols=76 Identities=13% Similarity=0.222 Sum_probs=44.8
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH---cCCeEEec-CCCC--cceeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH---CGRTVLTP-NYPS--IVRTVVVNEELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~s-~~gg--~~~e~v~~~~~G~l~~~-d~~~la~~i~ 419 (465)
++....+.. .|++++-..-++.-|..+++.+. .+.|+|.. .... ...+.+..|..+++..| +.++|.++|.
T Consensus 39 ~~al~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~ 118 (141)
T 3cu5_A 39 INAIQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEIMDALK 118 (141)
T ss_dssp HHHHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEEECSSCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccEEEeCCCCHHHHHHHHH
Confidence 444444433 58877633223445667777664 46787753 2221 11134556778999999 9999999999
Q ss_pred HHHhC
Q 044542 420 LVIRD 424 (465)
Q Consensus 420 ~ll~~ 424 (465)
+++..
T Consensus 119 ~~~~~ 123 (141)
T 3cu5_A 119 QSIQT 123 (141)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 288
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=37.46 E-value=1.3e+02 Score=22.59 Aligned_cols=76 Identities=9% Similarity=0.075 Sum_probs=46.8
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH-------cCCeEEecCCCCcce---eeeeeCCceEEeCC-CHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH-------CGRTVLTPNYPSIVR---TVVVNEELGYTFSP-NVKSFV 415 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma-------~G~PvI~s~~gg~~~---e~v~~~~~G~l~~~-d~~~la 415 (465)
++..+.+.. .|++++-..-++.-|..+++.+. ...|+|........+ +....|..+++..| +.++|.
T Consensus 48 ~~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~ 127 (143)
T 3m6m_D 48 EQVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAKLL 127 (143)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCCCHHHHHHHHHcChhheeeCCCCHHHHH
Confidence 455555543 68877743333455777777774 236777543322221 22345778999999 999999
Q ss_pred HHHHHHHhC
Q 044542 416 EALELVIRD 424 (465)
Q Consensus 416 ~~i~~ll~~ 424 (465)
++|.++...
T Consensus 128 ~~l~~~~~~ 136 (143)
T 3m6m_D 128 DTLADLAVS 136 (143)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHHh
Confidence 999988654
No 289
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=37.45 E-value=34 Score=30.83 Aligned_cols=35 Identities=14% Similarity=0.142 Sum_probs=24.8
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|+|++.. ..|++++ .+++.|.+.|++|.++....
T Consensus 21 ~~~vlVTG-------atG~iG~---~l~~~L~~~g~~V~~~~r~~ 55 (333)
T 2q1w_A 21 MKKVFITG-------ICGQIGS---HIAELLLERGDKVVGIDNFA 55 (333)
T ss_dssp CCEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEECCS
T ss_pred CCEEEEeC-------CccHHHH---HHHHHHHHCCCEEEEEECCC
Confidence 45777653 3366654 67788889999999987653
No 290
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=37.43 E-value=40 Score=30.38 Aligned_cols=35 Identities=17% Similarity=0.120 Sum_probs=25.1
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|+|++.. ..||+++ .+++.|.+.|++|.++....
T Consensus 5 ~~~vlVTG-------atG~iG~---~l~~~L~~~G~~V~~~~r~~ 39 (341)
T 3enk_A 5 KGTILVTG-------GAGYIGS---HTAVELLAHGYDVVIADNLV 39 (341)
T ss_dssp SCEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEECCCS
T ss_pred CcEEEEec-------CCcHHHH---HHHHHHHHCCCcEEEEecCC
Confidence 45776653 3467655 67889999999999887554
No 291
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=37.32 E-value=35 Score=28.68 Aligned_cols=39 Identities=13% Similarity=0.165 Sum_probs=28.2
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
.++||++.... +........+++.|.+.| +|+++.+...
T Consensus 18 ~~k~IllgvTG-------siaa~k~~~ll~~L~~~g-~V~vv~T~~A 56 (209)
T 1mvl_A 18 RKPRVLLAASG-------SVAAIKFGNLCHCFTEWA-EVRAVVTKSS 56 (209)
T ss_dssp -CCEEEEEECS-------SGGGGGHHHHHHHHHTTS-EEEEEECTGG
T ss_pred CCCEEEEEEeC-------cHHHHHHHHHHHHHhcCC-CEEEEEcchH
Confidence 35688887753 222345788999999999 9999987754
No 292
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=37.23 E-value=31 Score=31.45 Aligned_cols=35 Identities=14% Similarity=0.065 Sum_probs=25.3
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.|+|++.. ..|+++. .+++.|.+.||+|.++....
T Consensus 9 ~~~vlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r~~ 43 (357)
T 1rkx_A 9 GKRVFVTG-------HTGFKGG---WLSLWLQTMGATVKGYSLTA 43 (357)
T ss_dssp TCEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEC-------CCchHHH---HHHHHHHhCCCeEEEEeCCC
Confidence 46777663 3366654 57788889999999988654
No 293
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=37.22 E-value=59 Score=23.88 Aligned_cols=38 Identities=16% Similarity=0.103 Sum_probs=25.0
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHH-HHHHHHHhCCcE-EEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHAS-TLYHALAARGHE-IHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~-~l~~~L~~~G~~-V~v~~~~ 122 (465)
++||+++|.. . =|....+. .+-+.+.+.|.+ +.+-...
T Consensus 18 ~~kIlvvC~s-----G-~gTS~m~~~kl~~~~~~~gi~~~~i~~~~ 57 (110)
T 3czc_A 18 MVKVLTACGN-----G-MGSSMVIKMKVENALRQLGVSDIESASCS 57 (110)
T ss_dssp CEEEEEECCC-----C-HHHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred CcEEEEECCC-----c-HHHHHHHHHHHHHHHHHcCCCeEEEEEee
Confidence 5689999863 1 24555555 777888888987 6554433
No 294
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=37.21 E-value=52 Score=24.74 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=24.3
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTA 121 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 121 (465)
.++||+++... ......+...|.+.|++|..+..
T Consensus 2 ~~~~ilivdd~----------~~~~~~l~~~l~~~g~~v~~~~~ 35 (143)
T 3jte_A 2 SLAKILVIDDE----------STILQNIKFLLEIDGNEVLTASS 35 (143)
T ss_dssp -CCEEEEECSC----------HHHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCEEEEEcCC----------HHHHHHHHHHHHhCCceEEEeCC
Confidence 45799999764 34566788888889998875543
No 295
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=37.18 E-value=74 Score=27.90 Aligned_cols=43 Identities=14% Similarity=0.036 Sum_probs=27.2
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDR 125 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 125 (465)
...++||+|++. | .-.+..+-.+...+.+.|++|++++.....
T Consensus 5 ~~~~rvLvv~aH-P-----DDe~lg~GGtia~~~~~G~~V~vv~~T~G~ 47 (273)
T 3dff_A 5 PGATRLLAISPH-L-----DDAVLSFGAGLAQAAQDGANVLVYTVFAGA 47 (273)
T ss_dssp ---CEEEEEESS-T-----THHHHHHHHHHHHHHHTTCEEEEEETTCCC
T ss_pred CCCCCEEEEEeC-C-----ChHHHhHHHHHHHHHHCCCcEEEEEEeCCC
Confidence 346799999975 3 222333334555566789999999987654
No 296
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=37.15 E-value=2e+02 Score=24.61 Aligned_cols=106 Identities=8% Similarity=0.052 Sum_probs=63.3
Q ss_pred CCeEEEEEeCCcchh-H----HHHhcCCeEEcCCCChhHHHHHHHh---cCeEEecccCCCCCcHHHHHHHHc-----CC
Q 044542 317 PGVYLLVAGTGPWGR-R----YAELGQNVKVLGALEAHQLSEFYNA---LDVFVNPTLRPQGLDLTLIEAMHC-----GR 383 (465)
Q Consensus 317 ~~~~l~ivG~g~~~~-~----~~~l~~~V~~~g~v~~~~~~~~~~~---aDv~v~ps~~~eg~~~~~~EAma~-----G~ 383 (465)
...+++++-+.+... . ++..+..|... -+.++..+.+.. .|++++--.-++.-|+.+++.+.. .+
T Consensus 123 ~~~~ILivDD~~~~~~~l~~~L~~~~~~v~~a--~~~~eal~~l~~~~~~dlvllD~~mP~~dG~~l~~~lr~~~~~~~~ 200 (259)
T 3luf_A 123 QQIEVLVVDDSRTSRHRTMAQLRKQLLQVHEA--SHAREALATLEQHPAIRLVLVDYYMPEIDGISLVRMLRERYSKQQL 200 (259)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHTTTCEEEEE--SSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHHHCCTTTS
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHcCcEEEEe--CCHHHHHHHHhcCCCCCEEEEcCCCCCCCHHHHHHHHHhccCCCCC
Confidence 357888888754322 1 22222333333 234666666654 477776333345557777777643 46
Q ss_pred eEEe-cCCCCc--ceeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 384 TVLT-PNYPSI--VRTVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 384 PvI~-s~~gg~--~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
|||+ |..... ..+.+..|..+++..| +.++|...+.++++.
T Consensus 201 ~ii~~s~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~l~~ 245 (259)
T 3luf_A 201 AIIGISVSDKRGLSARYLKQGANDFLNQPFEPEELQCRVSHNLEA 245 (259)
T ss_dssp EEEEEECSSSSSHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred eEEEEEccCCHHHHHHHHhcChhheEcCCCCHHHHHHHHHHHHHh
Confidence 8874 332221 1122456788999999 999999999988764
No 297
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=37.07 E-value=35 Score=31.64 Aligned_cols=43 Identities=26% Similarity=0.336 Sum_probs=28.4
Q ss_pred CceeEEEEeCCCCCCCCCChH-HHHHHHHHHHH-HhCCcEEEEEeCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGM-ERHASTLYHAL-AARGHEIHVFTAPS 123 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~-~~~~~~l~~~L-~~~G~~V~v~~~~~ 123 (465)
.+|||+++....- .-... -....+++++| .+.||+|..+....
T Consensus 2 ~k~~v~vl~gG~s---~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~~ 46 (377)
T 1ehi_A 2 TKKRVALIFGGNS---SEHDVSKRSAQNFYNAIEATGKYEIIVFAIAQ 46 (377)
T ss_dssp -CEEEEEEEECSS---TTHHHHHHHHHHHHHHHHHHSSEEEEEEEECT
T ss_pred CCcEEEEEeCCCC---CCcceeHHHHHHHHHHhCcccCcEEEEEEEcC
Confidence 3689999985420 00001 12357889999 99999999997654
No 298
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=37.01 E-value=49 Score=24.72 Aligned_cols=33 Identities=3% Similarity=0.010 Sum_probs=24.0
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEe
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT 120 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 120 (465)
+++||+++... ......+...|.+.|++|..+.
T Consensus 2 ~~~~ilivdd~----------~~~~~~l~~~L~~~g~~v~~~~ 34 (140)
T 2qr3_A 2 SLGTIIIVDDN----------KGVLTAVQLLLKNHFSKVITLS 34 (140)
T ss_dssp CCCEEEEECSC----------HHHHHHHHHHHTTTSSEEEEEC
T ss_pred CCceEEEEeCC----------HHHHHHHHHHHHhCCcEEEEeC
Confidence 35789999764 3456677888888899887543
No 299
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=36.91 E-value=52 Score=29.28 Aligned_cols=98 Identities=11% Similarity=0.091 Sum_probs=55.7
Q ss_pred eeccccccCHHHHHHHHHHhhhcCCCeEEEEEeC--Cc-------chhHHHHhc-CCeEEcCC-----CChhHHHHHHHh
Q 044542 293 AGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGT--GP-------WGRRYAELG-QNVKVLGA-----LEAHQLSEFYNA 357 (465)
Q Consensus 293 ~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~--g~-------~~~~~~~l~-~~V~~~g~-----v~~~~~~~~~~~ 357 (465)
+|.-....+-..+++.+-++... ++.++.++.. +. +.+.+++++ +.|..+.- .+.+++.+.+..
T Consensus 32 iGGgedk~~~~~i~~~~v~lagg-~~~~I~~IptAs~~~~~~~~~~~~~f~~lG~~~v~~L~i~~r~~a~~~~~~~~l~~ 110 (291)
T 3en0_A 32 IGGAEDKVHGREILQTFWSRSGG-NDAIIGIIPSASREPLLIGERYQTIFSDMGVKELKVLDIRDRAQGDDSGYRLFVEQ 110 (291)
T ss_dssp ECSSCCSSSCCHHHHHHHHHTTG-GGCEEEEECTTCSSHHHHHHHHHHHHHHHCCSEEEECCCCSGGGGGCHHHHHHHHH
T ss_pred EECCCCccChHHHHHHHHHHcCC-CCCeEEEEeCCCCChHHHHHHHHHHHHHcCCCeeEEEEecCccccCCHHHHHHHhc
Confidence 45433322333455555444332 3456777653 22 123344566 36666543 334678889999
Q ss_pred cCeEEeccc---------CCCCCcHHHHHHHHcC-CeEEecCCC
Q 044542 358 LDVFVNPTL---------RPQGLDLTLIEAMHCG-RTVLTPNYP 391 (465)
Q Consensus 358 aDv~v~ps~---------~~eg~~~~~~EAma~G-~PvI~s~~g 391 (465)
||+++++.- +..++--.+-|+...| +|++.+..|
T Consensus 111 ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAG 154 (291)
T 3en0_A 111 CTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAG 154 (291)
T ss_dssp CSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHH
T ss_pred CCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHH
Confidence 999998631 1122234677888899 899887655
No 300
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=36.72 E-value=54 Score=28.97 Aligned_cols=39 Identities=15% Similarity=0.089 Sum_probs=27.3
Q ss_pred ceeEEEEeCCCCCCCCCChHHH---HHHHHHHHHHhCCcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMER---HASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~---~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+|||+++.... ....+. ....+++++.+.||+|.++...
T Consensus 2 ~~~i~il~gg~-----s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGT-----SAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCS-----STTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCC-----CccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 47999997532 111122 3468999999999999998766
No 301
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=36.69 E-value=28 Score=30.38 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=27.6
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|++++.. .+.||- -.-.++.|...|++|+|+....
T Consensus 87 ~vlVlcG~----GNNGGD---Glv~AR~L~~~G~~V~v~~~~~ 122 (259)
T 3d3k_A 87 TVALLCGP----HVKGAQ---GISCGRHLANHDVQVILFLPNF 122 (259)
T ss_dssp EEEEEECS----SHHHHH---HHHHHHHHHHTTCEEEEECCBC
T ss_pred eEEEEECC----CCCHHH---HHHHHHHHHHCCCeEEEEEecC
Confidence 79998863 355665 3567899999999999987764
No 302
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=36.67 E-value=44 Score=24.91 Aligned_cols=33 Identities=15% Similarity=0.109 Sum_probs=23.7
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEe
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT 120 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 120 (465)
.++||+++... ......+...|.+.|++|..+.
T Consensus 6 ~~~~ilivdd~----------~~~~~~l~~~L~~~g~~v~~~~ 38 (136)
T 3hdv_A 6 ARPLVLVVDDN----------AVNREALILYLKSRGIDAVGAD 38 (136)
T ss_dssp -CCEEEEECSC----------HHHHHHHHHHHHHTTCCEEEES
T ss_pred CCCeEEEECCC----------HHHHHHHHHHHHHcCceEEEeC
Confidence 45689999765 3456677888888899887654
No 303
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=36.66 E-value=36 Score=30.35 Aligned_cols=27 Identities=15% Similarity=0.183 Sum_probs=20.3
Q ss_pred CChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 95 PGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 95 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
.|+++. .+++.|.+.|++|.++.....
T Consensus 21 tG~iG~---~l~~~L~~~G~~V~~~~r~~~ 47 (321)
T 2pk3_A 21 AGFVGK---YLANHLTEQNVEVFGTSRNNE 47 (321)
T ss_dssp TSHHHH---HHHHHHHHTTCEEEEEESCTT
T ss_pred CChHHH---HHHHHHHHCCCEEEEEecCCc
Confidence 366654 678888899999999876543
No 304
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=36.64 E-value=1.6e+02 Score=26.38 Aligned_cols=106 Identities=11% Similarity=-0.027 Sum_probs=61.8
Q ss_pred HHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCe-EEecCCCCcce-eeeee----CCceEEeCC-CHHHHHHHHHHHH
Q 044542 350 QLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRT-VLTPNYPSIVR-TVVVN----EELGYTFSP-NVKSFVEALELVI 422 (465)
Q Consensus 350 ~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~P-vI~s~~gg~~~-e~v~~----~~~G~l~~~-d~~~la~~i~~ll 422 (465)
.-..-++.||++|.-...-|+|--.++++.. +.+ +|.... ++.. ....+ ...-+..++ +...+++.|.+.+
T Consensus 80 ~d~~~l~~ADlvv~~G~~lE~w~~~~~~~~~-~~~~~v~~s~-~i~~~~~~~~~~~~~DPHvWldp~n~~~~a~~I~~~L 157 (313)
T 1toa_A 80 GDVEWLGNADLILYNGLHLETKMGEVFSKLR-GSRLVVAVSE-TIPVSQRLSLEEAEFDPHVWFDVKLWSYSVKAVYESL 157 (313)
T ss_dssp HHHHHHHHCSEEEECCTTCSTTCHHHHHHHT-TSSEEEEGGG-GSCGGGSCBSTTSCBCCCGGGSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEcCCCcHHHHHHHHHhcc-CCCeEEEeec-CcccccccccCCCCCCCceeCCHHHHHHHHHHHHHHH
Confidence 3346679999999865444888888888876 444 443221 2210 00000 112234444 5566666666555
Q ss_pred h-CChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 044542 423 R-DGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRM 460 (465)
Q Consensus 423 ~-~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~ 460 (465)
. -+|+......+++.++..+ ++..-+++.+.+..+
T Consensus 158 ~~~DP~~a~~Y~~N~~~~~~~---L~~Ld~~~~~~l~~~ 193 (313)
T 1toa_A 158 CKLLPGKTREFTQRYQAYQQQ---LDKLDAYVRRKAQSL 193 (313)
T ss_dssp HHHCGGGHHHHHHHHHHHHHH---HHHHHHHHHHHHHTS
T ss_pred HHHChhhHHHHHHHHHHHHHH---HHHHHHHHHHHHhhC
Confidence 4 1267777777787777665 566666776666654
No 305
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=36.61 E-value=20 Score=32.11 Aligned_cols=36 Identities=31% Similarity=0.386 Sum_probs=23.5
Q ss_pred CCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-----C-cEEEEEeC
Q 044542 75 PTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-----G-HEIHVFTA 121 (465)
Q Consensus 75 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-----G-~~V~v~~~ 121 (465)
|+..+|||+++.. |.++. .++..|.+. | |+|+++..
T Consensus 4 m~~~~m~I~iiG~--------G~mG~---~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGL--------GGVGG---YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECC--------SHHHH---HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECc--------CHHHH---HHHHHHHhCccccCCCCCEEEEEc
Confidence 4455689999853 44443 456677777 9 99998864
No 306
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=36.53 E-value=35 Score=30.30 Aligned_cols=32 Identities=25% Similarity=0.402 Sum_probs=23.2
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTA 121 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 121 (465)
|||++.. ..||+++ .+++.|.++|++|.++..
T Consensus 1 m~vlVTG-------atG~iG~---~l~~~L~~~G~~V~~~~r 32 (311)
T 2p5y_A 1 MRVLVTG-------GAGFIGS---HIVEDLLARGLEVAVLDN 32 (311)
T ss_dssp CEEEEET-------TTSHHHH---HHHHHHHTTTCEEEEECC
T ss_pred CEEEEEe-------CCcHHHH---HHHHHHHHCCCEEEEEEC
Confidence 6777653 3366654 678889999999988754
No 307
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=36.45 E-value=18 Score=31.79 Aligned_cols=33 Identities=18% Similarity=0.272 Sum_probs=24.4
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|||+++. ..|+.+. .+++.|.++||+|+++...
T Consensus 6 m~ilVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r~ 38 (287)
T 3sc6_A 6 ERVIITG-------ANGQLGK---QLQEELNPEEYDIYPFDKK 38 (287)
T ss_dssp EEEEEES-------TTSHHHH---HHHHHSCTTTEEEEEECTT
T ss_pred eEEEEEC-------CCCHHHH---HHHHHHHhCCCEEEEeccc
Confidence 6787763 2366544 6788999999999998763
No 308
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=36.33 E-value=1.3e+02 Score=25.98 Aligned_cols=92 Identities=16% Similarity=0.182 Sum_probs=60.5
Q ss_pred EEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCC-------cch---hHHHHhcCCeEEcCCC--ChhHHHHHHH
Q 044542 289 VMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTG-------PWG---RRYAELGQNVKVLGAL--EAHQLSEFYN 356 (465)
Q Consensus 289 ~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g-------~~~---~~~~~l~~~V~~~g~v--~~~~~~~~~~ 356 (465)
.++|+|-+.-.-|...+...++++++++ | ++++..+ -.. +.+.+++-.+.-+|.= ++.++..++.
T Consensus 2 ~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d--~vi~ngen~~~G~g~~~~~~~~l~~~G~D~~T~GNHefD~~~l~~~l~ 78 (252)
T 2z06_A 2 RVLFIGDVMAEPGLRAVGLHLPDIRDRY-D--LVIANGENAARGKGLDRRSYRLLREAGVDLVSLGNHAWDHKEVYALLE 78 (252)
T ss_dssp EEEEECCBCHHHHHHHHHHHHHHHGGGC-S--EEEEECTTTTTTSSCCHHHHHHHHHHTCCEEECCTTTTSCTTHHHHHH
T ss_pred EEEEEEecCCcccHHHHHHHHHHHHhhC-C--EEEEeCCCccCCCCcCHHHHHHHHhCCCCEEEeccEeeECchHHHHhc
Confidence 3678999988889889999999999887 5 4444322 112 2344555555555642 5568999999
Q ss_pred hcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCc
Q 044542 357 ALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSI 393 (465)
Q Consensus 357 ~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~ 393 (465)
..+ .+.|..++++.| |+|...-+.+|.
T Consensus 79 ~~~-~vrpaN~~~~~p---------g~~~~i~~~~G~ 105 (252)
T 2z06_A 79 SEP-VVRPLNYPPGTP---------GKGFWRLEVGGE 105 (252)
T ss_dssp HSS-EECCTTSCSSCS---------SCSEEEEEETTE
T ss_pred cCC-ceEeecCCCCCC---------CCCeEEEEECCE
Confidence 999 777776544433 566555555554
No 309
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=36.32 E-value=49 Score=25.01 Aligned_cols=38 Identities=5% Similarity=0.065 Sum_probs=24.3
Q ss_pred CCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 75 PTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 75 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|++.++||+++... ......+...|.+.|+++.+.+..
T Consensus 1 M~~~~~~ILivdd~----------~~~~~~l~~~L~~~~~~~~v~~~~ 38 (144)
T 3kht_A 1 MSLRSKRVLVVEDN----------PDDIALIRRVLDRKDIHCQLEFVD 38 (144)
T ss_dssp ----CEEEEEECCC----------HHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CCCCCCEEEEEeCC----------HHHHHHHHHHHHhcCCCeeEEEEC
Confidence 34567899999764 345667888888899885444433
No 310
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=36.21 E-value=40 Score=28.61 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=23.9
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC--CcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR--GHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~ 122 (465)
+|+|++.. ..||.++ .+++.|.+. |++|.++...
T Consensus 4 ~~~ilVtG-------asG~iG~---~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 4 LPTVLVTG-------ASGRTGQ---IVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp CCEEEEES-------TTSHHHH---HHHHHHHHTTTTCEEEEEESC
T ss_pred CCEEEEEc-------CCcHHHH---HHHHHHHhcCCCcEEEEEEcC
Confidence 45666653 3366654 678888888 8999998764
No 311
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=36.18 E-value=59 Score=26.15 Aligned_cols=41 Identities=7% Similarity=0.027 Sum_probs=31.4
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
+|+++.++.. ...|-.+.+..|+..|.++|+.|.++.....
T Consensus 3 ~~~~i~i~G~-----sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~~ 43 (169)
T 1xjc_A 3 AMNVWQVVGY-----KHSGKTTLMEKWVAAAVREGWRVGTVKHHGH 43 (169)
T ss_dssp -CCEEEEECC-----TTSSHHHHHHHHHHHHHHTTCCEEEEECCC-
T ss_pred CCEEEEEECC-----CCCCHHHHHHHHHHhhHhcCCeeeEEEeCCC
Confidence 4677777652 3467788999999999999999999886654
No 312
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=35.95 E-value=32 Score=29.16 Aligned_cols=34 Identities=26% Similarity=0.380 Sum_probs=25.4
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
||+++|+. ..||+++ .+++.|.++|++|.+....
T Consensus 2 ~k~vlITG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITG------ASRGIGE---AIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEES------CSSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC------CCcHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 57777774 3467654 7889999999998887654
No 313
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=35.87 E-value=41 Score=28.65 Aligned_cols=35 Identities=11% Similarity=0.118 Sum_probs=25.2
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.|+++|+. ..||+++ .+++.|.++|++|.++....
T Consensus 7 ~k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~~ 41 (241)
T 1dhr_A 7 ARRVLVYG------GRGALGS---RCVQAFRARNWWVASIDVVE 41 (241)
T ss_dssp CCEEEEET------TTSHHHH---HHHHHHHTTTCEEEEEESSC
T ss_pred CCEEEEEC------CCcHHHH---HHHHHHHhCCCEEEEEeCCh
Confidence 35566664 3467654 68899999999999887654
No 314
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=35.87 E-value=18 Score=33.55 Aligned_cols=96 Identities=22% Similarity=0.217 Sum_probs=50.3
Q ss_pred cEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcc---hhHHHHhcCCeEEcCCCChhHHHHHHHh--cCeE
Q 044542 287 SLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPW---GRRYAELGQNVKVLGALEAHQLSEFYNA--LDVF 361 (465)
Q Consensus 287 ~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~---~~~~~~l~~~V~~~g~v~~~~~~~~~~~--aDv~ 361 (465)
++.++.+|-=.-.+.+-..+.++..+....++++++-+-+... ++..++++.. .. ..++.++++. .|++
T Consensus 25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~-~~-----y~d~~ell~~~~iDaV 98 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFE-KA-----TADWRALIADPEVDVV 98 (393)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCS-EE-----ESCHHHHHHCTTCCEE
T ss_pred CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCC-ee-----cCCHHHHhcCCCCcEE
Confidence 4777777742222222222222333333446778776665322 1222333311 11 1456677764 6888
Q ss_pred EecccCCCCCcHHHHHHHHcCCeEEecC
Q 044542 362 VNPTLRPQGLDLTLIEAMHCGRTVLTPN 389 (465)
Q Consensus 362 v~ps~~~eg~~~~~~EAma~G~PvI~s~ 389 (465)
+..+.. ..-.-.+.+|+.+|++|++=+
T Consensus 99 ~IatP~-~~H~~~a~~al~aGkhVl~EK 125 (393)
T 4fb5_A 99 SVTTPN-QFHAEMAIAALEAGKHVWCEK 125 (393)
T ss_dssp EECSCG-GGHHHHHHHHHHTTCEEEECS
T ss_pred EECCCh-HHHHHHHHHHHhcCCeEEEcc
Confidence 876542 222346788999999999854
No 315
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=35.72 E-value=51 Score=28.42 Aligned_cols=40 Identities=20% Similarity=0.256 Sum_probs=29.4
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
||++.|+.. ...-|-...+.+|+.+|++.|++|.++-.+.
T Consensus 2 ~~~I~v~s~----kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 2 VRTITVASG----KGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp CEEEEEEES----SSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECC----CCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 355555442 2334677889999999999999999987665
No 316
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=35.51 E-value=45 Score=24.96 Aligned_cols=34 Identities=15% Similarity=0.090 Sum_probs=23.0
Q ss_pred CCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEE
Q 044542 75 PTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHV 118 (465)
Q Consensus 75 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v 118 (465)
+...++||+++... ......+...|.+.|++|..
T Consensus 5 ~~~~~~~iLivdd~----------~~~~~~l~~~L~~~g~~v~~ 38 (140)
T 3cg0_A 5 ASDDLPGVLIVEDG----------RLAAATLRIQLESLGYDVLG 38 (140)
T ss_dssp ---CCCEEEEECCB----------HHHHHHHHHHHHHHTCEEEE
T ss_pred cCCCCceEEEEECC----------HHHHHHHHHHHHHCCCeeEE
Confidence 34456899999765 34556677778778998874
No 317
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=35.50 E-value=28 Score=28.86 Aligned_cols=38 Identities=16% Similarity=-0.048 Sum_probs=27.8
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
..||++.... +.+......+++.|.+.|++|+++.+..
T Consensus 8 ~k~IllgvTG-------s~aa~k~~~l~~~L~~~g~~V~vv~T~~ 45 (194)
T 1p3y_1 8 DKKLLIGICG-------SISSVGISSYLLYFKSFFKEIRVVMTKT 45 (194)
T ss_dssp GCEEEEEECS-------CGGGGGTHHHHHHHTTTSSEEEEEECHH
T ss_pred CCEEEEEEEC-------HHHHHHHHHHHHHHHHCCCEEEEEEchh
Confidence 3478877653 2223357889999999999999998764
No 318
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=35.41 E-value=41 Score=30.15 Aligned_cols=42 Identities=19% Similarity=0.098 Sum_probs=28.6
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+|||+++....- ......-.....++++|.+.||+|..+...
T Consensus 13 ~~~v~vl~gg~s--~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGES--AEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSS--TTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCC--CcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 579999986431 111111134678999999999999999743
No 319
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=35.33 E-value=27 Score=31.56 Aligned_cols=93 Identities=14% Similarity=0.051 Sum_probs=46.7
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC----------c--ccCCcceEEEeecCC-
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDRKPHN----------D--VHQGNLHVHFAANDH- 145 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~----------~--~~~~~~~v~~~~~~~- 145 (465)
+|||+|+... .+.....++|.+.||+|..+.+.++..... + ...+.+ +.......
T Consensus 2 ~mrivf~Gtp-----------~fa~~~L~~L~~~~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIp-v~~~~~~~~ 69 (314)
T 3tqq_A 2 SLKIVFAGTP-----------QFAVPTLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIP-IIQPFSLRD 69 (314)
T ss_dssp CCEEEEEECS-----------GGGHHHHHHHHHSSSEEEEEECCCC----------CCHHHHHHHHTTCC-EECCSCSSS
T ss_pred CcEEEEECCC-----------HHHHHHHHHHHHCCCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCC-EECcccCCC
Confidence 5899999762 123345577778899987776654322110 0 122222 22111110
Q ss_pred -CccccCCCCCCcEEEecCCc--hhHHhhhcCCcEEEEecc
Q 044542 146 -GSVNLNNDGAFDYVHTESVS--LPHWRAKMVPNVAVTWHG 183 (465)
Q Consensus 146 -~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 183 (465)
......+..+||++++-.+. ++..+....+.-.+.+|.
T Consensus 70 ~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHp 110 (314)
T 3tqq_A 70 EVEQEKLIAMNADVMVVVAYGLILPKKALNAFRLGCVNVHA 110 (314)
T ss_dssp HHHHHHHHTTCCSEEEEESCCSCCCHHHHTSSTTCEEEEES
T ss_pred HHHHHHHHhcCCCEEEEcCcccccCHHHHhhCcCCEEEecC
Confidence 01122267899999987652 222222222224778885
No 320
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=35.33 E-value=63 Score=27.85 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=23.7
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|+++|+. ..||+++ .+++.|.++|++|.++...
T Consensus 8 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 8 KVAVITG------SSSGIGL---AIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp CEEEEES------CSSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCchHHH---HHHHHHHHCCCEEEEEcCC
Confidence 4555653 3477755 6888999999999887654
No 321
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=35.28 E-value=1.4e+02 Score=22.21 Aligned_cols=76 Identities=9% Similarity=0.151 Sum_probs=46.2
Q ss_pred hHHHHHHH--hcCeEEecccCCCCCcHHHHHHHH---cCCeEEec-CCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542 349 HQLSEFYN--ALDVFVNPTLRPQGLDLTLIEAMH---CGRTVLTP-NYPSIV--RTVVVNEELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 349 ~~~~~~~~--~aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~ 419 (465)
++....+. ..|++++-..-++.-|..+++.+. ...|+|.. ...... .+.+..|..+++..| +.++|...|.
T Consensus 38 ~~a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~ 117 (137)
T 3cfy_A 38 RDAIQFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHGSVDLAVNLIQKGAEDFLEKPINADRLKTSVA 117 (137)
T ss_dssp HHHHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecCcHHHHHHHHHCCccEEEeCCCCHHHHHHHHH
Confidence 44444443 368887743223344666776664 35677643 322211 123345778899999 9999999998
Q ss_pred HHHhC
Q 044542 420 LVIRD 424 (465)
Q Consensus 420 ~ll~~ 424 (465)
.++..
T Consensus 118 ~~~~~ 122 (137)
T 3cfy_A 118 LHLKR 122 (137)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
No 322
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=35.18 E-value=36 Score=31.38 Aligned_cols=36 Identities=22% Similarity=0.297 Sum_probs=25.2
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCC-cEEEEEeCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARG-HEIHVFTAPS 123 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~ 123 (465)
+.|+|++.. ..|+++ ..+++.|.+.| ++|.++....
T Consensus 31 ~~~~ilVtG-------atG~iG---~~l~~~L~~~g~~~V~~~~r~~ 67 (377)
T 2q1s_A 31 ANTNVMVVG-------GAGFVG---SNLVKRLLELGVNQVHVVDNLL 67 (377)
T ss_dssp TTCEEEEET-------TTSHHH---HHHHHHHHHTTCSEEEEECCCT
T ss_pred CCCEEEEEC-------CccHHH---HHHHHHHHHcCCceEEEEECCC
Confidence 346777663 236654 46788899999 9999987553
No 323
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=35.10 E-value=52 Score=25.19 Aligned_cols=75 Identities=15% Similarity=0.158 Sum_probs=48.2
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH-----cCCeEEecCCCCcce---eeeeeCCceEEeCC-CHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH-----CGRTVLTPNYPSIVR---TVVVNEELGYTFSP-NVKSFVEA 417 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma-----~G~PvI~s~~gg~~~---e~v~~~~~G~l~~~-d~~~la~~ 417 (465)
++..+.++. .|++++=-.-++--|.-+++.+- ..+|||.-...+..+ +....|..+++..| ++++|.++
T Consensus 47 ~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~ 126 (134)
T 3to5_A 47 LTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEK 126 (134)
T ss_dssp HHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCCHHHHHHHHHTTCCEEEESSCCHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHH
Confidence 444444443 57777633334555778888874 457887533222221 22345778999999 99999999
Q ss_pred HHHHHh
Q 044542 418 LELVIR 423 (465)
Q Consensus 418 i~~ll~ 423 (465)
|.++++
T Consensus 127 i~~~l~ 132 (134)
T 3to5_A 127 LDKIFE 132 (134)
T ss_dssp HHHHCC
T ss_pred HHHHHh
Confidence 998764
No 324
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=35.10 E-value=47 Score=28.17 Aligned_cols=25 Identities=24% Similarity=0.325 Sum_probs=19.2
Q ss_pred CChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 95 PGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 95 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.||+++ .+++.|.++|++|.++...
T Consensus 16 sggiG~---~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 16 GKGIGR---GTVQALHATGARVVAVSRT 40 (244)
T ss_dssp TSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CcHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 477655 6788899999999887654
No 325
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=35.05 E-value=1.3e+02 Score=26.97 Aligned_cols=108 Identities=12% Similarity=-0.000 Sum_probs=60.3
Q ss_pred hHHHHHHHhcCeEEecccCCCCCcHHHHHHHHc-CCeEEecCCCCcce-eeee--e-------------CCceEEeCC-C
Q 044542 349 HQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHC-GRTVLTPNYPSIVR-TVVV--N-------------EELGYTFSP-N 410 (465)
Q Consensus 349 ~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~-G~PvI~s~~gg~~~-e~v~--~-------------~~~G~l~~~-d 410 (465)
..-...++.||++|.-...-|+|--.+++++.. ++++|.... ++.- ..-. + ...-+..++ +
T Consensus 62 p~d~~~l~~ADlvv~~G~~lE~w~~k~~~~~~~~~~~~v~~s~-~i~~~~~~~~~~~~~~~~~~~~~~~~DPHvWldp~n 140 (312)
T 2o1e_A 62 PKDIANIQDADLFVYNSEYMETWVPSAEKSMGQGHAVFVNASK-GIDLMEGSEEEHEEHDHGEHEHSHAMDPHVWLSPVL 140 (312)
T ss_dssp HHHHHHHHHSSEEEESCTTTSTTHHHHHHTTCSSSCEEEETTT-TCCCCCC----------------CCCCCGGGGSHHH
T ss_pred HHHHHHHhcCCEEEEcCCChHhHHHHHHHhcccCCCeEEEecC-CcccccCcccccccccccccccCCCCCCCcccCHHH
Confidence 344567889999998654347777777776643 355554332 2210 0000 0 011133344 4
Q ss_pred HHHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHh
Q 044542 411 VKSFVEALELVIRD-GPKVLQRKGLACKEHALSMFTATKMASAYERFFLRM 460 (465)
Q Consensus 411 ~~~la~~i~~ll~~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~ 460 (465)
...+++.|.+.+.. +|+......+++.++..+ ++.+-+++.+.+..+
T Consensus 141 ~~~~a~~I~~~L~~~DP~~a~~Y~~N~~~~~~~---L~~Ld~~~~~~l~~~ 188 (312)
T 2o1e_A 141 AQKEVKNITAQIVKQDPDNKEYYEKNSKEYIAK---LQDLDKLYRTTAKKA 188 (312)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH---HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH---HHHHHHHHHHHhhcc
Confidence 55666666655541 266667777777777665 566666666666654
No 326
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=35.00 E-value=34 Score=26.30 Aligned_cols=34 Identities=18% Similarity=0.044 Sum_probs=25.6
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+.+|+++.. ++.-..+++.|.+.|++|.++....
T Consensus 7 ~~~viIiG~-----------G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGY-----------GRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECC-----------SHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECc-----------CHHHHHHHHHHHHCCCCEEEEECCH
Confidence 347888742 2345678899999999999998764
No 327
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=34.92 E-value=60 Score=23.92 Aligned_cols=33 Identities=9% Similarity=0.198 Sum_probs=23.1
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEe
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT 120 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 120 (465)
.++||+++... ......+.+.|.+.|++|..+.
T Consensus 5 ~~~~ilivdd~----------~~~~~~l~~~L~~~g~~v~~~~ 37 (132)
T 3lte_A 5 QSKRILVVDDD----------QAMAAAIERVLKRDHWQVEIAH 37 (132)
T ss_dssp --CEEEEECSC----------HHHHHHHHHHHHHTTCEEEEES
T ss_pred CCccEEEEECC----------HHHHHHHHHHHHHCCcEEEEeC
Confidence 45799999765 3455667788888999887554
No 328
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=34.79 E-value=57 Score=26.02 Aligned_cols=38 Identities=21% Similarity=0.089 Sum_probs=25.5
Q ss_pred HHHHHhcCeEEeccc--C-CCCCcHHHHH---HHHcCCeEEecC
Q 044542 352 SEFYNALDVFVNPTL--R-PQGLDLTLIE---AMHCGRTVLTPN 389 (465)
Q Consensus 352 ~~~~~~aDv~v~ps~--~-~eg~~~~~~E---Ama~G~PvI~s~ 389 (465)
...+..||++|.--. + .+.-+.+..| |.+.|+|||+-.
T Consensus 62 ~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 62 IQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp HHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHCCCEEEEEE
Confidence 688999999987411 1 1223346666 679999999854
No 329
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=34.64 E-value=44 Score=29.22 Aligned_cols=31 Identities=26% Similarity=0.440 Sum_probs=23.6
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEe
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT 120 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 120 (465)
|+++|+. ..||+++ .+++.|.+.|++|.++.
T Consensus 32 k~~lVTG------as~GIG~---aia~~la~~G~~V~~~~ 62 (273)
T 3uf0_A 32 RTAVVTG------AGSGIGR---AIAHGYARAGAHVLAWG 62 (273)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEE
T ss_pred CEEEEeC------CCcHHHH---HHHHHHHHCCCEEEEEc
Confidence 5666764 3477755 68899999999998877
No 330
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=34.60 E-value=1.8e+02 Score=24.24 Aligned_cols=76 Identities=13% Similarity=0.143 Sum_probs=46.3
Q ss_pred hHHHHHHH--hcCeEEecccCCCCCcHHHHHHHHc--CCeEEec-CCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHHH
Q 044542 349 HQLSEFYN--ALDVFVNPTLRPQGLDLTLIEAMHC--GRTVLTP-NYPSIV--RTVVVNEELGYTFSP-NVKSFVEALEL 420 (465)
Q Consensus 349 ~~~~~~~~--~aDv~v~ps~~~eg~~~~~~EAma~--G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~~ 420 (465)
++....+. ..|++++-..-++.-|..+++.+.. ++|+|.. ...... ...+..|..|++..| ++++|..+|..
T Consensus 39 ~~al~~l~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~L~~~i~~ 118 (238)
T 2gwr_A 39 TQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRA 118 (238)
T ss_dssp GGHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEEEETTCCSCHHHHHHTTCCEEEEESCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHH
Confidence 34444443 3577776432234456677776643 6787743 222211 123455778999999 99999999998
Q ss_pred HHhC
Q 044542 421 VIRD 424 (465)
Q Consensus 421 ll~~ 424 (465)
++..
T Consensus 119 ~~~~ 122 (238)
T 2gwr_A 119 RLRR 122 (238)
T ss_dssp HCCC
T ss_pred HHhh
Confidence 8754
No 331
>3s2y_A Chromate reductase; uranium reductase, oxidoreductase; HET: FMN PG4; 2.24A {Gluconacetobacter hansenii}
Probab=40.82 E-value=8.3 Score=32.26 Aligned_cols=41 Identities=12% Similarity=0.105 Sum_probs=25.2
Q ss_pred CCceeEEEEeCCCCCCCCCChHHH-HHHHHHHHHHhCCcEEEEE-eCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMER-HASTLYHALAARGHEIHVF-TAP 122 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~-~~~~l~~~L~~~G~~V~v~-~~~ 122 (465)
..+|||++|..+ +..+|... .+..+++.+.+ |++|.++ ...
T Consensus 4 ~~~mkIliI~gS----~r~~s~t~~la~~~~~~~~~-g~~v~~i~dl~ 46 (199)
T 3s2y_A 4 TSPLHFVTLLGS----LRKASFNAAVARALPEIAPE-GIAITPLGSIG 46 (199)
Confidence 357899999876 23344333 34445555554 8888888 543
No 332
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=34.50 E-value=60 Score=25.73 Aligned_cols=38 Identities=21% Similarity=0.255 Sum_probs=27.9
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.|||+++... |-...-+....+.|.+.|++|.+++...
T Consensus 2 ~~ki~il~~~-------g~~~~e~~~~~~~l~~ag~~v~~vs~~~ 39 (168)
T 3l18_A 2 SMKVLFLSAD-------GFEDLELIYPLHRIKEEGHEVYVASFQR 39 (168)
T ss_dssp CCEEEEECCT-------TBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcEEEEEeCC-------CccHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 5799998753 2223445667788888999999998765
No 333
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=34.48 E-value=24 Score=31.49 Aligned_cols=41 Identities=15% Similarity=0.165 Sum_probs=28.0
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|||++++..... ....+ .....+++++.+.|++|.++...+
T Consensus 2 m~i~il~~~~~~-~~~~~--~s~~~l~~a~~~~G~~v~~~d~~~ 42 (316)
T 1gsa_A 2 IKLGIVMDPIAN-INIKK--DSSFAMLLEAQRRGYELHYMEMGD 42 (316)
T ss_dssp CEEEEECSCGGG-CCTTT--CHHHHHHHHHHHTTCEEEEECGGG
T ss_pred ceEEEEeCcHHh-CCcCC--ChHHHHHHHHHHCCCEEEEEchhH
Confidence 699999875311 01111 234579999999999999998753
No 334
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=34.43 E-value=66 Score=28.67 Aligned_cols=43 Identities=16% Similarity=0.245 Sum_probs=29.6
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.++|+++|.+-. ...|-.......+...|.+.|+++.++....
T Consensus 7 ~m~~~~vi~Np~---sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~ 49 (304)
T 3s40_A 7 KFEKVLLIVNPK---AGQGDLHTNLTKIVPPLAAAFPDLHILHTKE 49 (304)
T ss_dssp SCSSEEEEECTT---CSSSCHHHHHHHHHHHHHHHCSEEEEEECCS
T ss_pred CCCEEEEEECcc---cCCCchHHHHHHHHHHHHHcCCeEEEEEccC
Confidence 345788887632 2233345666788889999999999886554
No 335
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=34.40 E-value=33 Score=30.86 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=27.6
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|++++.. .+.||- -..+++.|...|++|.|+....
T Consensus 134 ~vlVlcG~----GNNGGD---Glv~AR~L~~~G~~V~V~~~~~ 169 (306)
T 3d3j_A 134 TVALLCGP----HVKGAQ---GISCGRHLANHDVQVILFLPNF 169 (306)
T ss_dssp EEEEEECS----SHHHHH---HHHHHHHHHHTTCEEEEECCCC
T ss_pred eEEEEECC----CCCHHH---HHHHHHHHHHCCCcEEEEEecC
Confidence 79998863 355555 3567899999999999987764
No 336
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=34.26 E-value=33 Score=30.99 Aligned_cols=32 Identities=22% Similarity=0.257 Sum_probs=22.7
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTA 121 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 121 (465)
|+|++.. ..|+++. .+++.|.+.|++|.++..
T Consensus 2 ~~vlVTG-------atG~iG~---~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 2 AKLLITG-------GCGFLGS---NLASFALSQGIDLIVFDN 33 (347)
T ss_dssp CEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEEC
T ss_pred cEEEEeC-------CCchhHH---HHHHHHHhCCCEEEEEeC
Confidence 4666553 3366654 678888899999998865
No 337
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=34.09 E-value=50 Score=28.33 Aligned_cols=35 Identities=6% Similarity=0.085 Sum_probs=25.7
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
|+++|+. ..||+++ .+++.|.++|++|.++.....
T Consensus 23 k~vlITG------as~gIG~---~la~~l~~~G~~V~~~~r~~~ 57 (251)
T 3orf_A 23 KNILVLG------GSGALGA---EVVKFFKSKSWNTISIDFREN 57 (251)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEeCCcc
Confidence 6666664 3467654 788999999999988876653
No 338
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=33.92 E-value=38 Score=30.79 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=24.7
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.|||+++.. |.++. .++..|++.|++|+++...
T Consensus 3 ~mkI~IiGa--------G~~G~---~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGA--------GAVGG---YLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESC--------CHHHH---HHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECc--------CHHHH---HHHHHHHHCCCEEEEEECh
Confidence 589999953 44433 5678888899999998753
No 339
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=33.87 E-value=69 Score=28.84 Aligned_cols=90 Identities=14% Similarity=0.146 Sum_probs=48.0
Q ss_pred EEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCC-ChhHHHHHHH--hcCeEEec
Q 044542 288 LVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGAL-EAHQLSEFYN--ALDVFVNP 364 (465)
Q Consensus 288 ~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v-~~~~~~~~~~--~aDv~v~p 364 (465)
+.++++|--.- | ..+++++... ++++++-+-+.. .+..+++.+.. |-. ...++.+++. ..|+++..
T Consensus 6 ~rigiiG~G~i--g-~~~~~~l~~~----~~~~~~av~d~~-~~~~~~~a~~~---~~~~~~~~~~~ll~~~~~D~V~i~ 74 (329)
T 3evn_A 6 VRYGVVSTAKV--A-PRFIEGVRLA----GNGEVVAVSSRT-LESAQAFANKY---HLPKAYDKLEDMLADESIDVIYVA 74 (329)
T ss_dssp EEEEEEBCCTT--H-HHHHHHHHHH----CSEEEEEEECSC-SSTTCC---CC---CCSCEESCHHHHHTCTTCCEEEEC
T ss_pred eEEEEEechHH--H-HHHHHHHHhC----CCcEEEEEEcCC-HHHHHHHHHHc---CCCcccCCHHHHhcCCCCCEEEEC
Confidence 55666664211 1 2345665544 577777554322 11122222110 100 1256777787 78999886
Q ss_pred ccCCCCCcHHHHHHHHcCCeEEecC
Q 044542 365 TLRPQGLDLTLIEAMHCGRTVLTPN 389 (465)
Q Consensus 365 s~~~eg~~~~~~EAma~G~PvI~s~ 389 (465)
+.. ..-.-.+.+|+..|++|++-+
T Consensus 75 tp~-~~h~~~~~~al~aGk~Vl~EK 98 (329)
T 3evn_A 75 TIN-QDHYKVAKAALLAGKHVLVEK 98 (329)
T ss_dssp SCG-GGHHHHHHHHHHTTCEEEEES
T ss_pred CCc-HHHHHHHHHHHHCCCeEEEcc
Confidence 542 222345678999999999855
No 340
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=33.83 E-value=68 Score=23.96 Aligned_cols=33 Identities=12% Similarity=0.173 Sum_probs=23.9
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEe
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT 120 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 120 (465)
.++||+++... ......+...|.+.|++|..+.
T Consensus 5 ~~~~iLivdd~----------~~~~~~l~~~l~~~g~~v~~~~ 37 (140)
T 3grc_A 5 PRPRILICEDD----------PDIARLLNLMLEKGGFDSDMVH 37 (140)
T ss_dssp CCSEEEEECSC----------HHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCEEEEcCC----------HHHHHHHHHHHHHCCCeEEEEC
Confidence 35699999764 3456677788888999976554
No 341
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=33.64 E-value=2e+02 Score=23.67 Aligned_cols=76 Identities=13% Similarity=0.087 Sum_probs=47.9
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH---cCCeEEec-CCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH---CGRTVLTP-NYPSIV--RTVVVNEELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~ 419 (465)
++....+.. .|++++--.-++.-|..+++.+. .++|||.. ...... .+.+..|..+++..| +.++|..+|.
T Consensus 41 ~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~ 120 (233)
T 1ys7_A 41 AEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120 (233)
T ss_dssp HHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECCCTTTCCCTTTTTTCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHH
Confidence 454444443 58877743223445677777774 36788753 222211 133455778999999 9999999999
Q ss_pred HHHhC
Q 044542 420 LVIRD 424 (465)
Q Consensus 420 ~ll~~ 424 (465)
.++..
T Consensus 121 ~~~~~ 125 (233)
T 1ys7_A 121 ALLRR 125 (233)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 88753
No 342
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=33.63 E-value=1.4e+02 Score=21.94 Aligned_cols=77 Identities=10% Similarity=0.048 Sum_probs=46.9
Q ss_pred hhHHHHHHHh--cCeEEecccCC-----CCCcHHHHHHHH---cCCeEEecCCCCcc---eeeeeeCCceEEeCC-CHHH
Q 044542 348 AHQLSEFYNA--LDVFVNPTLRP-----QGLDLTLIEAMH---CGRTVLTPNYPSIV---RTVVVNEELGYTFSP-NVKS 413 (465)
Q Consensus 348 ~~~~~~~~~~--aDv~v~ps~~~-----eg~~~~~~EAma---~G~PvI~s~~gg~~---~e~v~~~~~G~l~~~-d~~~ 413 (465)
.++....+.. .|++++-..-+ +.-|..+++.+. .++|+|........ .+.+..+..+++..+ +.++
T Consensus 36 ~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~ 115 (140)
T 2qr3_A 36 PVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKEGASDFVVKPWDNQK 115 (140)
T ss_dssp HHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHTTCCEEEEESCCHHH
T ss_pred HHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCCHHHHHHHHHcCchheeeCCCCHHH
Confidence 3555555554 47777633222 334566666654 36777753221111 123345677899999 9999
Q ss_pred HHHHHHHHHhC
Q 044542 414 FVEALELVIRD 424 (465)
Q Consensus 414 la~~i~~ll~~ 424 (465)
|.++|.+++..
T Consensus 116 l~~~l~~~~~~ 126 (140)
T 2qr3_A 116 LLETLLNAASQ 126 (140)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 99999999886
No 343
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=33.51 E-value=38 Score=27.40 Aligned_cols=64 Identities=14% Similarity=0.190 Sum_probs=38.9
Q ss_pred HHHHHHhcCeEEecccCCCCCcHH--HHHHHH-------cCCeEEecCCCCcceeeeeeC-------CceEEeCCCHHHH
Q 044542 351 LSEFYNALDVFVNPTLRPQGLDLT--LIEAMH-------CGRTVLTPNYPSIVRTVVVNE-------ELGYTFSPNVKSF 414 (465)
Q Consensus 351 ~~~~~~~aDv~v~ps~~~eg~~~~--~~EAma-------~G~PvI~s~~gg~~~e~v~~~-------~~G~l~~~d~~~l 414 (465)
-.-+...||.+|.- +.|+|+- +.|++. .++| +..+ +... .++.+. ..-+.+..|++++
T Consensus 91 k~~~~~~sda~ivl---pGG~GTl~El~e~lt~~q~g~~~~kP-vll~-g~~~-~l~~~~gfi~~~~~~~~~~~~~~~e~ 164 (171)
T 1weh_A 91 IGRLLDLGAGYLAL---PGGVGTLAELVLAWNLLYLRRGVGRP-LAVD-PYWL-GLLKAHGEIAPEDVGLLRVVADEEDL 164 (171)
T ss_dssp HHHHHHHEEEEEEC---SCCHHHHHHHHHHHHHHHTCSSCSCC-EEEC-GGGG-GTCCCBTTBCHHHHTTSEECCSHHHH
T ss_pred HHHHHHhCCEEEEe---CCCccHHHHHHHHHHHHHhCccCCCe-EEEC-cchh-hhHhhcCCCChhhcCeEEEeCCHHHH
Confidence 34456679998872 3567765 889998 7899 7777 4333 333111 1123444478888
Q ss_pred HHHHHH
Q 044542 415 VEALEL 420 (465)
Q Consensus 415 a~~i~~ 420 (465)
.+.|.+
T Consensus 165 ~~~l~~ 170 (171)
T 1weh_A 165 RRFLRS 170 (171)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 777653
No 344
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=33.50 E-value=32 Score=30.23 Aligned_cols=36 Identities=14% Similarity=0.259 Sum_probs=25.0
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
...|||++... .|+.+. .+++.|.++|++|.++...
T Consensus 10 ~~~~~vlVtGa-------tG~iG~---~l~~~L~~~g~~V~~~~r~ 45 (292)
T 1vl0_A 10 HHHMKILITGA-------NGQLGR---EIQKQLKGKNVEVIPTDVQ 45 (292)
T ss_dssp --CEEEEEEST-------TSHHHH---HHHHHHTTSSEEEEEECTT
T ss_pred cccceEEEECC-------CChHHH---HHHHHHHhCCCeEEeccCc
Confidence 34678887642 366544 6788899999999988754
No 345
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=33.41 E-value=55 Score=30.21 Aligned_cols=82 Identities=10% Similarity=0.004 Sum_probs=50.3
Q ss_pred hHHHHHHHhcCeEEec--ccCCCCCcHHHHHHHHcCCeEEecCCCCcceeeeeeCCceEEeCC--CHHHHHHHHHHHHhC
Q 044542 349 HQLSEFYNALDVFVNP--TLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVVVNEELGYTFSP--NVKSFVEALELVIRD 424 (465)
Q Consensus 349 ~~~~~~~~~aDv~v~p--s~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v~~~~~G~l~~~--d~~~la~~i~~ll~~ 424 (465)
++..++++.....+.- |...+=.-=++.+|+.+|+-.|.-..+... +++. ...-+-++. ++++||+-|..+.+|
T Consensus 223 ~~~~~~l~~YKFyLafENs~c~dYvTEK~~~al~~g~VPI~~G~~~~~-~~~P-p~SfI~~~dF~s~~~La~yL~~L~~n 300 (371)
T 2nzw_A 223 KNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVA-KDFN-PKSFVNVHDFKNFDEAIDYIKYLHTH 300 (371)
T ss_dssp SCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCTTGG-GTSC-GGGSEEGGGSSSHHHHHHHHHHHHTC
T ss_pred ccHHHHHhcCcEEEEEeccCCCCcccHHHHHHHhCCeEEEEECCCchh-hhCC-CCceEEcccCCCHHHHHHHHHHHhcC
Confidence 3455667777766652 322122234888999999755544444444 4443 222333433 899999999999998
Q ss_pred ChHHHHHHH
Q 044542 425 GPKVLQRKG 433 (465)
Q Consensus 425 ~~~~~~~~~ 433 (465)
++.+.++-
T Consensus 301 -~~~Y~~y~ 308 (371)
T 2nzw_A 301 -KNAYLDML 308 (371)
T ss_dssp -HHHHHHHH
T ss_pred -HHHHHHHH
Confidence 76666544
No 346
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=33.41 E-value=46 Score=29.46 Aligned_cols=33 Identities=12% Similarity=0.335 Sum_probs=23.5
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|.++|+. ..||+++ .+++.|.++|++|.++...
T Consensus 19 k~vlVTG------asggIG~---~la~~l~~~G~~V~~~~r~ 51 (303)
T 1yxm_A 19 QVAIVTG------GATGIGK---AIVKELLELGSNVVIASRK 51 (303)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCcHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 4555553 3477655 6888999999999888654
No 347
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=33.38 E-value=50 Score=30.38 Aligned_cols=42 Identities=12% Similarity=0.192 Sum_probs=30.4
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDR 125 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 125 (465)
|||+.|+.. ...-|-.+.+.+|+.+|++.|.+|.++-.+...
T Consensus 1 MkvIav~s~----KGGvGKTT~a~nLA~~LA~~G~rVLlID~D~q~ 42 (361)
T 3pg5_A 1 MRTISFFNN----KGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQC 42 (361)
T ss_dssp CEEEEBCCS----SCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CeEEEEEcC----CCCCcHHHHHHHHHHHHHhCCCcEEEEEcCCCC
Confidence 677777653 122244457889999999999999999877653
No 348
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=33.28 E-value=54 Score=28.13 Aligned_cols=45 Identities=13% Similarity=0.196 Sum_probs=28.9
Q ss_pred eeEEEEeCC----CCCCCC-CChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 80 LKLAVFSKT----WPIGAA-PGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 80 mkIl~v~~~----~p~~~~-~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
+|||++... +..... .|=...-+......|.+.|++|+++++...
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g~ 53 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGK 53 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 489999863 211001 222223455677788899999999998764
No 349
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=33.23 E-value=2.5e+02 Score=24.55 Aligned_cols=114 Identities=16% Similarity=0.109 Sum_probs=63.4
Q ss_pred HHHHHhhhcCCCeEEEEEeCCcch-----hHHHHhcCCeE-EcCCCChhHHHHHHHh--cCeEEecccCC---CCCc-HH
Q 044542 307 EAFSSITRDHPGVYLLVAGTGPWG-----RRYAELGQNVK-VLGALEAHQLSEFYNA--LDVFVNPTLRP---QGLD-LT 374 (465)
Q Consensus 307 ~a~~~l~~~~~~~~l~ivG~g~~~-----~~~~~l~~~V~-~~g~v~~~~~~~~~~~--aDv~v~ps~~~---eg~~-~~ 374 (465)
.+...+... ...+++++.+.+.. ..++..+-.|. .. -+.++..+.+.. .|++++=-.-+ .|+- ..
T Consensus 150 rA~~~Lr~~-l~~rILvVdD~~~~~~~l~~~L~~~g~~v~~~a--~~g~eAl~~~~~~~~dlvl~D~~MPd~mdG~e~~~ 226 (286)
T 3n0r_A 150 DAQAEIDAE-LATEVLIIEDEPVIAADIEALVRELGHDVTDIA--ATRGEALEAVTRRTPGLVLADIQLADGSSGIDAVK 226 (286)
T ss_dssp HHHHHHHTS-CCCEEEEECCSHHHHHHHHHHHHHTTCEEEEEE--SSHHHHHHHHHHCCCSEEEEESCCTTSCCTTTTTH
T ss_pred HHHhhhhcc-CCCcEEEEcCCHHHHHHHHHHhhccCceEEEEe--CCHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHH
Confidence 344444433 34567777765432 22333333333 22 234666666654 58888722112 2322 12
Q ss_pred HHHHHHcCCeEEec-CCCCcceeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 375 LIEAMHCGRTVLTP-NYPSIVRTVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 375 ~~EAma~G~PvI~s-~~gg~~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
.+-+.. .+|||.- ..+......+..|..+++..| ++++|...|.+++..
T Consensus 227 ~ir~~~-~~piI~lT~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~i~~~l~~ 277 (286)
T 3n0r_A 227 DILGRM-DVPVIFITAFPERLLTGERPEPTFLITKPFQPETVKAAIGQALFF 277 (286)
T ss_dssp HHHHHT-TCCEEEEESCGGGGCCSSSCCCSSEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHhcC-CCCEEEEeCCHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHHHHHh
Confidence 223333 8999853 322222234455778899999 999999999999875
No 350
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=33.18 E-value=1.3e+02 Score=21.52 Aligned_cols=75 Identities=8% Similarity=0.119 Sum_probs=44.8
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH--cCCeEEecCCCCcce---eeeeeCCceEEeCC-CHHHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH--CGRTVLTPNYPSIVR---TVVVNEELGYTFSP-NVKSFVEALEL 420 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma--~G~PvI~s~~gg~~~---e~v~~~~~G~l~~~-d~~~la~~i~~ 420 (465)
++..+.+.. .|++++-..-++.-|..+++.+. .+.|+|........+ +.+..|..+++..| +.+++..++.+
T Consensus 36 ~~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~ 115 (120)
T 3f6p_A 36 NEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKA 115 (120)
T ss_dssp HHHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSCHHHHHHHHHTTCCEEEEESCCHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCChHHHHHHHhCCcceeEcCCCCHHHHHHHHHH
Confidence 444444433 57777633223444566666654 356776432222111 23445778999999 99999999988
Q ss_pred HHh
Q 044542 421 VIR 423 (465)
Q Consensus 421 ll~ 423 (465)
++.
T Consensus 116 ~l~ 118 (120)
T 3f6p_A 116 NLR 118 (120)
T ss_dssp HHT
T ss_pred HHh
Confidence 775
No 351
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=33.16 E-value=68 Score=25.77 Aligned_cols=39 Identities=23% Similarity=0.300 Sum_probs=27.2
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
..+|||++-+.. +|.+ .-..+.+.|.+.||+|.=+....
T Consensus 18 ~~~MkIaIgsDh-------aG~~-lK~~i~~~L~~~G~eV~D~G~~~ 56 (169)
T 3ph3_A 18 GSHMKIGIGSDH-------GGYN-LKREIADFLKKRGYEVIDFGTHG 56 (169)
T ss_dssp ---CEEEEEECG-------GGHH-HHHHHHHHHHHTTCEEEECCCCS
T ss_pred CCCCEEEEEeCc-------hHHH-HHHHHHHHHHHCCCEEEEcCCCC
Confidence 346899988764 6655 35578899999999988765543
No 352
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=33.12 E-value=52 Score=26.82 Aligned_cols=40 Identities=10% Similarity=0.081 Sum_probs=0.0
Q ss_pred CCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHH-HhCCcEEEEEe
Q 044542 75 PTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHAL-AARGHEIHVFT 120 (465)
Q Consensus 75 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L-~~~G~~V~v~~ 120 (465)
|...+|||||||. ..-.-...+..+.+.+ .+.|.++.+.+
T Consensus 30 m~~~~mkVLFVC~------GNiCRSpmAE~l~r~~~~~~g~~~~v~S 70 (180)
T 4egs_A 30 MGRGSMRVLFVCT------GNTCRSPMAEGIFNAKSKALGKDWEAKS 70 (180)
T ss_dssp ----CCEEEEEES------SSSSHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCCCeEEEEEeC------CCcccCHHHHHHHHHHHHhcCCceEEEE
No 353
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=33.06 E-value=1.5e+02 Score=21.88 Aligned_cols=76 Identities=9% Similarity=0.146 Sum_probs=46.6
Q ss_pred hHHHHHHH--hcCeEEecccCC-CCCcHHHHHHHH--cCCeEEec-CCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542 349 HQLSEFYN--ALDVFVNPTLRP-QGLDLTLIEAMH--CGRTVLTP-NYPSIV--RTVVVNEELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 349 ~~~~~~~~--~aDv~v~ps~~~-eg~~~~~~EAma--~G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~ 419 (465)
++....+. ..|++++-...+ +.-|..+++.+. .++|+|.. ...... .+.+..+..+++..| +.++|..+|.
T Consensus 44 ~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~ 123 (140)
T 3cg0_A 44 EEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQDVETFQRAKRVNPFGYLAKPVAADTLHRSIE 123 (140)
T ss_dssp HHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCCHHHHHHHHTTCCSEEEEESCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHhcCCCEEEeCCCCHHHHHHHHH
Confidence 45545443 368877743222 234566666654 47888753 332211 023345667899999 9999999999
Q ss_pred HHHhC
Q 044542 420 LVIRD 424 (465)
Q Consensus 420 ~ll~~ 424 (465)
+++..
T Consensus 124 ~~~~~ 128 (140)
T 3cg0_A 124 MAIHK 128 (140)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88765
No 354
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=33.02 E-value=29 Score=31.22 Aligned_cols=34 Identities=15% Similarity=0.143 Sum_probs=23.4
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCC--cEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARG--HEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~ 122 (465)
.|||++.. ..|+++. .+++.|.+.| ++|.++...
T Consensus 3 ~m~vlVTG-------atG~iG~---~l~~~L~~~g~~~~V~~~~r~ 38 (336)
T 2hun_A 3 SMKLLVTG-------GMGFIGS---NFIRYILEKHPDWEVINIDKL 38 (336)
T ss_dssp CCEEEEET-------TTSHHHH---HHHHHHHHHCTTCEEEEEECC
T ss_pred CCeEEEEC-------CCchHHH---HHHHHHHHhCCCCEEEEEecC
Confidence 57877663 3366655 5677888776 899888654
No 355
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=32.99 E-value=39 Score=30.02 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=24.9
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTA 121 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 121 (465)
+||+++.+. ..+.....+..+.+.|.++|++|.+...
T Consensus 6 kki~ii~np-----~~~~~~~~~~~i~~~l~~~g~~v~~~~~ 42 (292)
T 2an1_A 6 KCIGIVGHP-----RHPTALTTHEMLYRWLCDQGYEVIVEQQ 42 (292)
T ss_dssp CEEEEECC------------CHHHHHHHHHHHTTCEEEEEHH
T ss_pred cEEEEEEcC-----CCHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 579988763 2345556788899999999999887643
No 356
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=32.90 E-value=31 Score=32.18 Aligned_cols=51 Identities=16% Similarity=0.208 Sum_probs=30.5
Q ss_pred cccCCCCCceeEEEEeCCCCCCCCCChHH-HHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 71 LCFGPTFEKLKLAVFSKTWPIGAAPGGME-RHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 71 l~~~~~~~~mkIl~v~~~~p~~~~~gG~~-~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
+.+-..|.+|||+++....- .. ..+. .....++++|.+.||+|+.+.....
T Consensus 14 ~~~~~~m~~~~v~vl~GG~S--~E-~evSl~Sa~~v~~al~~~~~~v~~i~i~~~ 65 (386)
T 3e5n_A 14 LYFQGHMRKIRVGLIFGGKS--AE-HEVSLQSARNILDALDPQRFEPVLIGIDKQ 65 (386)
T ss_dssp -------CCEEEEEEEECSS--TT-HHHHHHHHHHHHHHSCTTTEEEEEEEECTT
T ss_pred chhhhhcCCceEEEEeccCC--CC-chhHHHHHHHHHHHhCccCCEEEEEEECCC
Confidence 34433556899999986531 11 1111 3456888999999999999886643
No 357
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=32.84 E-value=95 Score=27.33 Aligned_cols=108 Identities=10% Similarity=0.043 Sum_probs=60.1
Q ss_pred HHHHHHHhcCeEEecccCCCCCcHHHHHHHHc-CCeEEecCCCCcce-ee--ee-------eC-----CceEEeCC-CHH
Q 044542 350 QLSEFYNALDVFVNPTLRPQGLDLTLIEAMHC-GRTVLTPNYPSIVR-TV--VV-------NE-----ELGYTFSP-NVK 412 (465)
Q Consensus 350 ~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~-G~PvI~s~~gg~~~-e~--v~-------~~-----~~G~l~~~-d~~ 412 (465)
.-..-++.||++|.-...-|+|--.+++++.. +.++|.... ++.- +. .. ++ ..-+..++ +..
T Consensus 51 ~d~~~l~~Adlvv~~G~~lE~w~~~~~~~~~~~~~~~v~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~dPH~Wldp~~~~ 129 (284)
T 3cx3_A 51 NDIAAIYDADVFVYHSHTLESWAGSLDPNLKKSKVKVLEASE-GMTLERVPGLEDVEAGDGVDEKTLYDPHTWLDPEKAG 129 (284)
T ss_dssp HHHHHHHHSSEEEESCTTTSCTTTTCCTTTTTCCCEEEETTT-TCCCCBCCC-------------CCBCCCGGGSHHHHH
T ss_pred HHHHHHHhCCEEEEcCCCcHhHHHHHHHhcccCCCeEEEccC-CccccccCCcccccccccccCCCCCCCCcccCHHHHH
Confidence 34467899999998654347776677776643 455554332 2210 00 00 00 11233344 455
Q ss_pred HHHHHHHHHHh-CChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhc
Q 044542 413 SFVEALELVIR-DGPKVLQRKGLACKEHALSMFTATKMASAYERFFLRMK 461 (465)
Q Consensus 413 ~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~ 461 (465)
.+++.|.+.+. -+|+......+++.++..+ ++.+-+++.+.+..+.
T Consensus 130 ~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~---L~~Ld~~~~~~l~~~~ 176 (284)
T 3cx3_A 130 EEAQIIADKLSEVDSEHKETYQKNAQAFIKK---AQELTKKFQPKFEKAT 176 (284)
T ss_dssp HHHHHHHHHHHHHSGGGHHHHHHHHHHHHHH---HHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHH---HHHHHHHHHHHHhcCC
Confidence 66666665554 1266677777777777665 5666666666666543
No 358
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=32.67 E-value=33 Score=31.36 Aligned_cols=33 Identities=18% Similarity=0.246 Sum_probs=23.8
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+|||+++.. |.++. .++..|.+.||+|+++...
T Consensus 4 ~mki~iiG~--------G~~G~---~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGL--------GNGGH---AFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECC--------SHHHH---HHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECC--------CHHHH---HHHHHHHhCCCEEEEEeCC
Confidence 589999843 44443 4677888899999888543
No 359
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=32.59 E-value=1.3e+02 Score=27.54 Aligned_cols=90 Identities=14% Similarity=0.146 Sum_probs=49.7
Q ss_pred cEEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHH--hcCeEEec
Q 044542 287 SLVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYN--ALDVFVNP 364 (465)
Q Consensus 287 ~~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~--~aDv~v~p 364 (465)
++.++++|--.- |....+.++.. .++++++-+-+... +..++....+... .++.+++. ..|+++..
T Consensus 7 ~~rvgiiG~G~~--g~~~~~~~l~~----~~~~~l~av~d~~~-~~~~~~~~~~~~~-----~~~~~ll~~~~~D~V~i~ 74 (364)
T 3e82_A 7 TINIALIGYGFV--GKTFHAPLIRS----VPGLNLAFVASRDE-EKVKRDLPDVTVI-----ASPEAAVQHPDVDLVVIA 74 (364)
T ss_dssp CEEEEEECCSHH--HHHTHHHHHHT----STTEEEEEEECSCH-HHHHHHCTTSEEE-----SCHHHHHTCTTCSEEEEC
T ss_pred cceEEEECCCHH--HHHHHHHHHhh----CCCeEEEEEEcCCH-HHHHhhCCCCcEE-----CCHHHHhcCCCCCEEEEe
Confidence 366777774211 11113344433 36788875554332 2333222223222 45667777 68998886
Q ss_pred ccCCCCCcHHHHHHHHcCCeEEecC
Q 044542 365 TLRPQGLDLTLIEAMHCGRTVLTPN 389 (465)
Q Consensus 365 s~~~eg~~~~~~EAma~G~PvI~s~ 389 (465)
+.. ..-.-.+.+|+..|++|++-+
T Consensus 75 tp~-~~H~~~~~~al~aGk~Vl~EK 98 (364)
T 3e82_A 75 SPN-ATHAPLARLALNAGKHVVVDK 98 (364)
T ss_dssp SCG-GGHHHHHHHHHHTTCEEEECS
T ss_pred CCh-HHHHHHHHHHHHCCCcEEEeC
Confidence 542 222335678999999999854
No 360
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=32.58 E-value=1.1e+02 Score=27.17 Aligned_cols=88 Identities=13% Similarity=0.151 Sum_probs=49.1
Q ss_pred EEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHH--hcCeEEecc
Q 044542 288 LVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYN--ALDVFVNPT 365 (465)
Q Consensus 288 ~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~--~aDv~v~ps 365 (465)
+.++++|--.-.+ .+++++.+. ++++++.+-+ ...+..+++.+.+... .++.++++ .+|+++..+
T Consensus 11 ~~igiIG~G~~g~---~~~~~l~~~----~~~~~v~v~d-~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~D~V~i~t 77 (315)
T 3c1a_A 11 VRLALIGAGRWGK---NYIRTIAGL----PGAALVRLAS-SNPDNLALVPPGCVIE-----SDWRSVVSAPEVEAVIIAT 77 (315)
T ss_dssp EEEEEEECTTTTT---THHHHHHHC----TTEEEEEEEE-SCHHHHTTCCTTCEEE-----SSTHHHHTCTTCCEEEEES
T ss_pred ceEEEECCcHHHH---HHHHHHHhC----CCcEEEEEEe-CCHHHHHHHHhhCccc-----CCHHHHhhCCCCCEEEEeC
Confidence 6666776422222 234555443 5677664433 2334444444333321 34556675 789998865
Q ss_pred cCCCCCcHHHHHHHHcCCeEEecC
Q 044542 366 LRPQGLDLTLIEAMHCGRTVLTPN 389 (465)
Q Consensus 366 ~~~eg~~~~~~EAma~G~PvI~s~ 389 (465)
.. ....-.+.+|+..|++|++-+
T Consensus 78 p~-~~h~~~~~~al~~Gk~v~~eK 100 (315)
T 3c1a_A 78 PP-ATHAEITLAAIASGKAVLVEK 100 (315)
T ss_dssp CG-GGHHHHHHHHHHTTCEEEEES
T ss_pred Ch-HHHHHHHHHHHHCCCcEEEcC
Confidence 32 223345668899999999754
No 361
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=32.49 E-value=29 Score=30.07 Aligned_cols=36 Identities=19% Similarity=0.155 Sum_probs=27.5
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|++++.. .+.||- -...++.|.+.|++|+|+....
T Consensus 60 ~v~VlcG~----GNNGGD---Glv~AR~L~~~G~~V~v~~~~~ 95 (246)
T 1jzt_A 60 HVFVIAGP----GNNGGD---GLVCARHLKLFGYNPVVFYPKR 95 (246)
T ss_dssp EEEEEECS----SHHHHH---HHHHHHHHHHTTCCEEEECCCC
T ss_pred eEEEEECC----CCCHHH---HHHHHHHHHHCCCeEEEEEcCC
Confidence 89998863 355555 3567899999999999987654
No 362
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=32.36 E-value=36 Score=29.83 Aligned_cols=36 Identities=14% Similarity=0.154 Sum_probs=27.5
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|++++.. .+.||- -...++.|.+.|++|.|+....
T Consensus 81 ~VlVlcG~----GNNGGD---Glv~AR~L~~~G~~V~V~~~~~ 116 (265)
T 2o8n_A 81 TVLVICGP----GNNGGD---GLVCARHLKLFGYQPTIYYPKR 116 (265)
T ss_dssp EEEEEECS----SHHHHH---HHHHHHHHHHTTCEEEEECCSC
T ss_pred eEEEEECC----CCCHHH---HHHHHHHHHHCCCcEEEEEeCC
Confidence 89998863 355555 3567899999999999987654
No 363
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=32.34 E-value=73 Score=25.84 Aligned_cols=42 Identities=17% Similarity=0.222 Sum_probs=28.9
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
++.+|||+++... |-...-+......|.+.|++|.+++....
T Consensus 6 ~~~~~~v~il~~~-------g~~~~e~~~~~~~l~~ag~~v~~vs~~~~ 47 (190)
T 2vrn_A 6 DLTGKKIAILAAD-------GVEEIELTSPRAAIEAAGGTTELISLEPG 47 (190)
T ss_dssp CCTTCEEEEECCT-------TCBHHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCCCEEEEEeCC-------CCCHHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 3456799998642 22233455677888889999999997753
No 364
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=32.15 E-value=38 Score=30.53 Aligned_cols=32 Identities=16% Similarity=0.338 Sum_probs=23.2
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTA 121 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 121 (465)
|||++.. ..|+++. .+++.|.++|++|.++..
T Consensus 1 m~vlVTG-------atG~iG~---~l~~~L~~~G~~V~~~~~ 32 (338)
T 1udb_A 1 MRVLVTG-------GSGYIGS---HTCVQLLQNGHDVIILDN 32 (338)
T ss_dssp CEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEC-------CCCHHHH---HHHHHHHHCCCEEEEEec
Confidence 6776653 3366655 678889999999998764
No 365
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=32.09 E-value=71 Score=27.87 Aligned_cols=34 Identities=12% Similarity=0.157 Sum_probs=25.2
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.|+++|+. ..||+++ .+++.|.++|++|.+....
T Consensus 27 ~k~~lVTG------as~GIG~---aia~~l~~~G~~V~~~~r~ 60 (277)
T 4fc7_A 27 DKVAFITG------GGSGIGF---RIAEIFMRHGCHTVIASRS 60 (277)
T ss_dssp TCEEEEET------TTSHHHH---HHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEeC------CCchHHH---HHHHHHHHCCCEEEEEeCC
Confidence 36777774 3467654 6889999999999887654
No 366
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=31.97 E-value=41 Score=29.69 Aligned_cols=35 Identities=23% Similarity=0.360 Sum_probs=24.1
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCC-cEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARG-HEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~ 123 (465)
+|+|+++. ..|+.++ .+++.|.+.| ++|.+++...
T Consensus 5 ~~~ilVtG-------atG~iG~---~l~~~L~~~g~~~V~~~~R~~ 40 (299)
T 2wm3_A 5 KKLVVVFG-------GTGAQGG---SVARTLLEDGTFKVRVVTRNP 40 (299)
T ss_dssp CCEEEEET-------TTSHHHH---HHHHHHHHHCSSEEEEEESCT
T ss_pred CCEEEEEC-------CCchHHH---HHHHHHHhcCCceEEEEEcCC
Confidence 35676653 3366554 5777888888 9999988754
No 367
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=31.95 E-value=79 Score=23.16 Aligned_cols=41 Identities=20% Similarity=0.151 Sum_probs=26.8
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHH--HHHHHHHHhCCcEEEEEeCCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHA--STLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~--~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
+|||+.|+.. | .|=+..++ ..|-++-+++||++.|=+....
T Consensus 2 ~mkivaVtaC-p----tGiAhTymAAeaLekaA~~~G~~ikVEtqgs~ 44 (106)
T 2m1z_A 2 KRKIIAVTAC-A----TGVAHTYMAAQALKKGAKKMGNLIKVETQGAT 44 (106)
T ss_dssp CCEEEEEEEC-S----SCHHHHHHHHHHHHHHHHHHTCEEEEEEEETT
T ss_pred CccEEEEEEC-C----CcHHHHHHHHHHHHHHHHHCCCEEEEEEecCc
Confidence 4799999764 2 23333333 3555666678999999987654
No 368
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=31.93 E-value=1.1e+02 Score=26.73 Aligned_cols=42 Identities=12% Similarity=0.156 Sum_probs=28.2
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSDR 125 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 125 (465)
..||||+|++. | .-.+..+-.+...+.+.|++|++++.....
T Consensus 6 ~~~rvLvv~aH-P-----DDe~l~~GGtia~~~~~G~~V~vv~~T~Ge 47 (270)
T 3dfi_A 6 DRTRILAISPH-L-----DDAVLSVGASLAQAEQDGGKVTVFTVFAGS 47 (270)
T ss_dssp CCSEEEEEESS-T-----THHHHHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred CCCCEEEEEeC-C-----chHHHhhHHHHHHHHhCCCeEEEEEEeCCC
Confidence 45799999975 3 223333344555566789999999987654
No 369
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=31.89 E-value=42 Score=29.47 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=24.8
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+.|+++|+. ..||+++ .+++.|.++|++|.++...
T Consensus 23 ~~k~~lVTG------as~GIG~---aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 23 RPQTAFVTG------VSSGIGL---AVARTLAARGIAVYGCARD 57 (279)
T ss_dssp --CEEEEES------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeC------CCCHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 347777775 3477755 6888999999998877654
No 370
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=31.81 E-value=42 Score=28.97 Aligned_cols=36 Identities=17% Similarity=0.289 Sum_probs=26.8
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+||.++|+. ..||+++ .+++.|.+.|++|.++....
T Consensus 6 ~~k~vlVTG------as~gIG~---~~a~~l~~~G~~v~~~~~~~ 41 (264)
T 3i4f_A 6 FVRHALITA------GTKGLGK---QVTEKLLAKGYSVTVTYHSD 41 (264)
T ss_dssp CCCEEEETT------TTSHHHH---HHHHHHHHTTCEEEEEESSC
T ss_pred ccCEEEEeC------CCchhHH---HHHHHHHHCCCEEEEEcCCC
Confidence 467777774 3467654 78899999999999886554
No 371
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=31.65 E-value=1.1e+02 Score=24.26 Aligned_cols=76 Identities=21% Similarity=0.262 Sum_probs=46.7
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH---cCCeEEec-CCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH---CGRTVLTP-NYPSIV--RTVVVNEELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~ 419 (465)
++..+.+.. .|++++-..-++.-|+.+++.+. ...|||.. ...... .+.+..|..+++..| +.++|..+|.
T Consensus 41 ~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~a~~~Ga~~~l~KP~~~~~L~~~i~ 120 (184)
T 3rqi_A 41 DEALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYASIATAVQAVKDGADNYLAKPANVESILAALQ 120 (184)
T ss_dssp HHHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHTS
T ss_pred HHHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHhCHHHheeCCCCHHHHHHHHH
Confidence 444444433 47777633223445667777664 36788753 332211 123456778999999 9999999998
Q ss_pred HHHhC
Q 044542 420 LVIRD 424 (465)
Q Consensus 420 ~ll~~ 424 (465)
.++..
T Consensus 121 ~~~~~ 125 (184)
T 3rqi_A 121 TNASE 125 (184)
T ss_dssp TTHHH
T ss_pred HHHHH
Confidence 87764
No 372
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=31.58 E-value=49 Score=29.09 Aligned_cols=34 Identities=9% Similarity=0.229 Sum_probs=23.7
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+|||+++... |- .-..+++.|.+.||+|.++...
T Consensus 11 mm~I~iIG~t-------G~---mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAG-------GK---MGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CCEEEEETTT-------SH---HHHHHHHHHHHSSSEEEEECCS
T ss_pred CCEEEEECCC-------CH---HHHHHHHHHHhCCCEEEEEECC
Confidence 4799998431 33 3446788889999999877543
No 373
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=31.57 E-value=1e+02 Score=27.05 Aligned_cols=49 Identities=12% Similarity=0.137 Sum_probs=35.0
Q ss_pred CCCCCceeEEEEeC--CCC---CCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 74 GPTFEKLKLAVFSK--TWP---IGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 74 ~~~~~~mkIl~v~~--~~p---~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.|..++.++++|.. .|. ..+..-|...=+..|.+.|.+.|++|.+...-
T Consensus 15 ~m~~~~rg~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~V~~~~dl 68 (278)
T 3od5_A 15 KMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDL 68 (278)
T ss_dssp CCCSSBCCEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCcCEEEEEeccccCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCC
Confidence 44555556666653 343 12466788899999999999999999988643
No 374
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=31.57 E-value=1.8e+02 Score=23.72 Aligned_cols=66 Identities=6% Similarity=0.040 Sum_probs=40.7
Q ss_pred hcCeEEecccCCCCCcHHHHHHHH-------cCCeEEec-CCCCcc---eeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 357 ALDVFVNPTLRPQGLDLTLIEAMH-------CGRTVLTP-NYPSIV---RTVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 357 ~aDv~v~ps~~~eg~~~~~~EAma-------~G~PvI~s-~~gg~~---~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
..|++|+-..-++.-|..+++.+. ..+|||.. ...... .+.+..+..+++..| + +|.++|.+++..
T Consensus 119 ~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~KP~~--~L~~~i~~~l~~ 196 (206)
T 3mm4_A 119 PFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDKSLN--QLANVIREIESK 196 (206)
T ss_dssp SCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEETTCT--THHHHHHHHC--
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEcCcHH--HHHHHHHHHHhh
Confidence 368887743333455777777764 45788753 322121 123445778899998 7 899999888775
No 375
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=31.53 E-value=25 Score=31.54 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=24.7
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|+|+++.. .|+.+. .+++.|.+.||+|.+++...
T Consensus 4 ~~~ilVtGa-------tG~iG~---~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYGG-------TGYIGK---FMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEETT-------TSTTHH---HHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEEcC-------CchhHH---HHHHHHHhCCCcEEEEECCc
Confidence 457777643 355544 57788888999999988764
No 376
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=31.46 E-value=29 Score=31.34 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=25.1
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.+..|||++|... .++ ..++..|.+.||+|.++...
T Consensus 28 ~~~~~~I~iIG~G--------~mG---~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 28 DPYARKITFLGTG--------SMG---LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp -CCCSEEEEECCT--------TTH---HHHHHHHHHTTCEEEEECSC
T ss_pred ccCCCEEEEECcc--------HHH---HHHHHHHHhCCCeEEEEcCC
Confidence 3456899999642 222 35788888999999887544
No 377
>1fjk_A Cardiac phospholamban; helix, membrane protein; NMR {Sus scrofa} SCOP: j.37.1.1 PDB: 1fjp_A 2kyv_A 1zll_A 2hyn_A 1n7l_A 2kb7_P 1plp_A
Probab=31.46 E-value=26 Score=20.72 Aligned_cols=16 Identities=6% Similarity=-0.066 Sum_probs=9.6
Q ss_pred chhhHHHHHHHHHHHh
Q 044542 17 LSLRYSTVLISALFFT 32 (465)
Q Consensus 17 ~~~~~~~~~~~~~~~~ 32 (465)
|.+||-+|+.++++-|
T Consensus 32 fvnfclilicllli~i 47 (52)
T 1fjk_A 32 FINFCLILIFLLLICI 47 (52)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5667777765555443
No 378
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=31.42 E-value=23 Score=31.51 Aligned_cols=35 Identities=20% Similarity=0.333 Sum_probs=24.8
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|+|+++.. .|+.++ .+++.|.+.|++|.+++...
T Consensus 4 ~~~ilVtGa-------tG~iG~---~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIVGG-------TGYIGK---RIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEEST-------TSTTHH---HHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEEcC-------CcHHHH---HHHHHHHhCCCcEEEEECCC
Confidence 467887743 255443 57788888999999987764
No 379
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=31.30 E-value=26 Score=28.84 Aligned_cols=34 Identities=21% Similarity=0.174 Sum_probs=23.4
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEE
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEI 116 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V 116 (465)
.+|||+++..+ ..|-.+..+..+++.+.+.+++|
T Consensus 5 ~~~kiliiy~S-----~~GnT~~lA~~ia~~l~~~~~~v 38 (193)
T 3d7n_A 5 SSSNTVVVYHS-----GYGHTHRMAEAVAEGAEATLHAI 38 (193)
T ss_dssp -CCCEEEEECC-----SSSHHHHHHHHHHHHHTCEEEEC
T ss_pred CCCEEEEEEEC-----CChHHHHHHHHHHHHhhhcceEe
Confidence 45799999764 34777777888888887655443
No 380
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=31.21 E-value=23 Score=31.40 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=24.5
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|+|+++.. .|+.+. .+++.|.+.||+|.+++...
T Consensus 4 ~~~ilVtGa-------tG~iG~---~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLIGA-------TGYIGR---HVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEEST-------TSTTHH---HHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEEcC-------CcHHHH---HHHHHHHhCCCCEEEEECCc
Confidence 457777643 255443 57788889999999887654
No 381
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=31.20 E-value=98 Score=27.12 Aligned_cols=49 Identities=10% Similarity=0.013 Sum_probs=34.9
Q ss_pred CCCCCceeEEEEeCC--CCC----------CCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 74 GPTFEKLKLAVFSKT--WPI----------GAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 74 ~~~~~~mkIl~v~~~--~p~----------~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.|..++..+++|.+. |.. .+..-|.+.=+..|.+.|.+.|++|.+...-
T Consensus 11 ~m~~~~rG~aLIInn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~V~~~~dl 71 (271)
T 3h11_B 11 QMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHDDC 71 (271)
T ss_dssp CCCSSSCCEEEEEECCCCSHHHHTCGGGTTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCCCEEEEEEchhcCcccccccccccCCCCCCcHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 444455566666543 321 2456788889999999999999999988654
No 382
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=31.06 E-value=59 Score=30.00 Aligned_cols=43 Identities=16% Similarity=0.196 Sum_probs=32.4
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
..++||++.|+.. ...-|-...+.+|+.+|+++|.+|.++-.+
T Consensus 139 ~~~~~kvIav~s~----KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 139 ENDKSSVVIFTSP----CGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp CTTSCEEEEEECS----STTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred cCCCceEEEEECC----CCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 3456787777653 234466778899999999999999998877
No 383
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=31.04 E-value=61 Score=29.09 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=24.7
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|||+++.. |.++. .++..|++.|++|+++....
T Consensus 3 mkI~IiGa--------GaiG~---~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGT--------GAIGS---FYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESC--------CHHHH---HHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECc--------CHHHH---HHHHHHHhCCCeEEEEeCCh
Confidence 79999853 44443 46778888999999998753
No 384
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=30.98 E-value=41 Score=29.50 Aligned_cols=33 Identities=24% Similarity=0.455 Sum_probs=24.1
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|||+++.. |.++ ..++..|.+.||+|+++....
T Consensus 1 m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGC--------GALG---QLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECc--------CHHH---HHHHHHHHhCCCCEEEEEcCc
Confidence 68998843 4443 367888889999999986543
No 385
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=30.86 E-value=1.7e+02 Score=22.04 Aligned_cols=76 Identities=13% Similarity=0.149 Sum_probs=47.1
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHHc---CCeEEec-CCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMHC---GRTVLTP-NYPSIV--RTVVVNEELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma~---G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~ 419 (465)
++....+.. .|++++-..-++.-|..+++.+.. ++|+|.. ...... .+.+..|..+++..+ +.++|.++|.
T Consensus 41 ~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~i~ 120 (153)
T 3cz5_A 41 GEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTKSSDPAELVQAIE 120 (153)
T ss_dssp HHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHHTTCSEEEETTSCTTHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHH
Confidence 455555543 577776432234446666666643 5677753 332211 123345678899999 9999999999
Q ss_pred HHHhC
Q 044542 420 LVIRD 424 (465)
Q Consensus 420 ~ll~~ 424 (465)
.++..
T Consensus 121 ~~~~~ 125 (153)
T 3cz5_A 121 AILAG 125 (153)
T ss_dssp HHTTT
T ss_pred HHHhC
Confidence 99875
No 386
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=30.68 E-value=60 Score=23.51 Aligned_cols=32 Identities=25% Similarity=0.317 Sum_probs=22.4
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEe
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT 120 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 120 (465)
++||+++... ......+...|.+.|++|....
T Consensus 5 ~~~ilivdd~----------~~~~~~l~~~L~~~g~~v~~~~ 36 (127)
T 2gkg_A 5 SKKILIVESD----------TALSATLRSALEGRGFTVDETT 36 (127)
T ss_dssp -CEEEEECSC----------HHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCeEEEEeCC----------HHHHHHHHHHHHhcCceEEEec
Confidence 3589998764 3456677788888899887544
No 387
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=30.58 E-value=68 Score=28.03 Aligned_cols=34 Identities=32% Similarity=0.391 Sum_probs=24.5
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|+++|+. ..||+++ .+++.|.++|++|.+.....
T Consensus 30 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~~ 63 (283)
T 1g0o_A 30 KVALVTG------AGRGIGR---EMAMELGRRGCKVIVNYANS 63 (283)
T ss_dssp CEEEETT------TTSHHHH---HHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeC------CCcHHHH---HHHHHHHHCCCEEEEEeCCc
Confidence 5666664 3467654 68889999999998876543
No 388
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=30.48 E-value=37 Score=31.66 Aligned_cols=46 Identities=11% Similarity=0.084 Sum_probs=30.4
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.|.+|||+++....- ....-.-....+++++|.+.||+|+.+....
T Consensus 34 ~m~~~~v~vl~GG~S--~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~ 79 (383)
T 3k3p_A 34 SMSKETLVLLYGGRS--AERDVSVLSAESVMRAINYDNFLVKTYFITQ 79 (383)
T ss_dssp ---CEEEEEEEECSS--TTHHHHHHHHHHHHHHSCTTTEEEEEEEECT
T ss_pred cccCCeEEEEeCCCC--CcchHHHHHHHHHHHHhhhcCCEEEEEEecC
Confidence 456789999986531 1212222457788899999999999988664
No 389
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=30.40 E-value=1.3e+02 Score=26.43 Aligned_cols=50 Identities=10% Similarity=0.128 Sum_probs=36.4
Q ss_pred CCCCCceeEEEEeC--CCC---CCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 74 GPTFEKLKLAVFSK--TWP---IGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 74 ~~~~~~mkIl~v~~--~~p---~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.|..++.++++|.. .|. ..+..-|...=+..|.+.|.+.|++|++...-.
T Consensus 38 ~m~~~~rg~aLIInN~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~V~~~~dlt 92 (277)
T 4ehd_A 38 KMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLT 92 (277)
T ss_dssp CCCSSEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred cCCCCCCCEEEEEEchhcCCcCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCCC
Confidence 55666677777764 342 113567888889999999999999999876543
No 390
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=30.32 E-value=1.5e+02 Score=24.07 Aligned_cols=111 Identities=10% Similarity=0.141 Sum_probs=60.6
Q ss_pred CChhHHHHHHHhcCeEEecccCCC--CCcHH-HHHHHHcCCeEEe-cCCCCcceeeee---eCCc-eEEeCCCHHHHHHH
Q 044542 346 LEAHQLSEFYNALDVFVNPTLRPQ--GLDLT-LIEAMHCGRTVLT-PNYPSIVRTVVV---NEEL-GYTFSPNVKSFVEA 417 (465)
Q Consensus 346 v~~~~~~~~~~~aDv~v~ps~~~e--g~~~~-~~EAma~G~PvI~-s~~gg~~~e~v~---~~~~-G~l~~~d~~~la~~ 417 (465)
++.++..+..+.-.++-....++. |.+.. +-+.+..|+.||. .+..|.. .+-. .... -++.+++.+.|.+.
T Consensus 53 vs~~eF~~~i~~g~flE~~~~~g~~YGt~~~~v~~~l~~g~~vil~id~~g~~-~~k~~~~~~~~~Ifi~pps~e~L~~R 131 (186)
T 1ex7_A 53 VSVDEFKSMIKNNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVK-SVKAIPELNARFLFIAPPSVEDLKKR 131 (186)
T ss_dssp CCHHHHHHHHHTTCEEEEEEETTEEEEEEHHHHHHHHHHTSEEEEECCHHHHH-HHHTCGGGCCEEEEEECSCHHHHHHH
T ss_pred ecHHHHHHHHHcCCEEEEEEEcCceeeeecceeeehhhCCCEEEecCCHHHHH-HHHHhcccCceEEEEeCCCHHHHHHH
Confidence 456888888887777666443322 33433 5677889998876 3333332 2211 0112 23334599999988
Q ss_pred HHHHHhCChHHHHHHHHHHHHHHHh----hC-------CHHHHHHHHHHHH
Q 044542 418 LELVIRDGPKVLQRKGLACKEHALS----MF-------TATKMASAYERFF 457 (465)
Q Consensus 418 i~~ll~~~~~~~~~~~~~~~~~~~~----~f-------s~~~~~~~~~~~~ 457 (465)
+..--.+.++..++.-.++.+-+.. .| +++...+++.+++
T Consensus 132 L~~Rg~e~~e~i~~Rl~~a~~e~~~~~~~~fD~vIvNddle~a~~~l~~iI 182 (186)
T 1ex7_A 132 LEGRGTETEESINKRLSAAQAELAYAETGAHDKVIVNDDLDKAYKELKDFI 182 (186)
T ss_dssp HHHHCCSCHHHHHHHHHHHHHHHHHHTTTCSSEEEECSSHHHHHHHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHhhccccCCcEEEECcCHHHHHHHHHHHH
Confidence 8876555444443322333322211 12 5666666666654
No 391
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=30.31 E-value=47 Score=27.90 Aligned_cols=98 Identities=10% Similarity=0.037 Sum_probs=50.6
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC--CcEEEEEeCCCCCCCCCc-ccCCcceEEEeecCC--C-----
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAAR--GHEIHVFTAPSDRKPHND-VHQGNLHVHFAANDH--G----- 146 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~-~~~~~~~v~~~~~~~--~----- 146 (465)
|.++||+++... + +..+..+.+++.+. +++|..+.++..+....+ -...+..+....... .
T Consensus 5 m~~~ri~vl~SG-------~--gsnl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~~~~~~r~~~d 75 (209)
T 4ds3_A 5 MKRNRVVIFISG-------G--GSNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKRKDFASKEAHE 75 (209)
T ss_dssp -CCEEEEEEESS-------C--CHHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCGGGSSSHHHHH
T ss_pred CCCccEEEEEEC-------C--cHHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCccccCCHHHHH
Confidence 456789988653 2 23467788887664 368776666543332221 122233333332211 1
Q ss_pred --ccccCCCCCCcEEEecCCc--hhHHhhhcCCcEEEEecc
Q 044542 147 --SVNLNNDGAFDYVHTESVS--LPHWRAKMVPNVAVTWHG 183 (465)
Q Consensus 147 --~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 183 (465)
.....+..+||+|++-.+. ++..+-...+.-++.+|.
T Consensus 76 ~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 116 (209)
T 4ds3_A 76 DAILAALDVLKPDIICLAGYMRLLSGRFIAPYEGRILNIHP 116 (209)
T ss_dssp HHHHHHHHHHCCSEEEESSCCSCCCHHHHGGGTTCEEEEES
T ss_pred HHHHHHHHhcCCCEEEEeccccCcCHHHHhhccCCeEEECC
Confidence 1112267789999987652 222222222335778885
No 392
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=30.30 E-value=1.5e+02 Score=21.15 Aligned_cols=75 Identities=13% Similarity=0.176 Sum_probs=46.2
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH--cCCeEEe-cCCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH--CGRTVLT-PNYPSIV--RTVVVNEELGYTFSP-NVKSFVEALEL 420 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma--~G~PvI~-s~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~~ 420 (465)
++....+.. .|++++-..-++.-|..+++.+. ...|+|. +...... .+.+..|..+++..| +.+++...+.+
T Consensus 36 ~~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~ 115 (122)
T 1zgz_A 36 AGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKN 115 (122)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCCChhhHHHHHHhCHHHHccCCCCHHHHHHHHHH
Confidence 455555543 57877643223445677777774 3567764 3332211 123445778999999 99999999988
Q ss_pred HHh
Q 044542 421 VIR 423 (465)
Q Consensus 421 ll~ 423 (465)
++.
T Consensus 116 ~~~ 118 (122)
T 1zgz_A 116 LLW 118 (122)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 393
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=30.28 E-value=77 Score=27.16 Aligned_cols=33 Identities=12% Similarity=0.045 Sum_probs=24.6
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|+++|+. ..||+++ .+++.|.++|++|.++...
T Consensus 8 k~vlVTG------as~GIG~---aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 8 ATVAVIG------AGDYIGA---EIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp CEEEEEC------CSSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEC------CCchHHH---HHHHHHHHCCCEEEEEeCC
Confidence 6666764 3477754 7889999999998887654
No 394
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=30.27 E-value=67 Score=27.71 Aligned_cols=40 Identities=18% Similarity=0.181 Sum_probs=29.6
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
|||+.|+. ...-|-.+.+.+|+.+|++.|++|.++-.+..
T Consensus 1 M~vI~vs~-----KGGvGKTT~a~nLA~~la~~G~~VlliD~D~q 40 (269)
T 1cp2_A 1 MRQVAIYG-----KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK 40 (269)
T ss_dssp CEEEEEEE-----CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred CcEEEEec-----CCCCcHHHHHHHHHHHHHHCCCcEEEEcCCCC
Confidence 56655553 23346667888999999999999999877654
No 395
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=30.18 E-value=37 Score=30.37 Aligned_cols=35 Identities=14% Similarity=0.364 Sum_probs=25.2
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
...|||++|.. |-+ -..+++.|.+.||+|.++...
T Consensus 7 ~~~~~IgiIG~--------G~m---G~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 7 SFEFDVSVIGL--------GAM---GTIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp CCSCSEEEECC--------SHH---HHHHHHHHHHTTCCEEEECSS
T ss_pred cCCCeEEEECC--------CHH---HHHHHHHHHHCCCEEEEEeCC
Confidence 34679999953 333 346888899999999887543
No 396
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=30.06 E-value=51 Score=28.06 Aligned_cols=86 Identities=12% Similarity=0.081 Sum_probs=50.2
Q ss_pred HHHHHHHHHHhhhcCCCeEEEEEeCC----cch-------hHHHHhcCCeEEcCCCChhHHHHHHHhcCeEEeccc----
Q 044542 302 HPLLYEAFSSITRDHPGVYLLVAGTG----PWG-------RRYAELGQNVKVLGALEAHQLSEFYNALDVFVNPTL---- 366 (465)
Q Consensus 302 ~~~ll~a~~~l~~~~~~~~l~ivG~g----~~~-------~~~~~l~~~V~~~g~v~~~~~~~~~~~aDv~v~ps~---- 366 (465)
++...+++..+.+. +-++.++..+ +.. +.+++++-.+..+-.. ++..+.+..||.+++|.-
T Consensus 17 l~~~~~~l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v~~~--~d~~~~l~~ad~I~lpGG~~~~ 92 (229)
T 1fy2_A 17 LEHALPLIANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRV--ADPLAAIEKAEIIIVGGGNTFQ 92 (229)
T ss_dssp TTTTHHHHHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEETTSS--SCHHHHHHHCSEEEECCSCHHH
T ss_pred HHHHHHHHHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEecc--ccHHHHHhcCCEEEECCCcHHH
Confidence 44445666665543 3456666533 111 2234444444444322 356678899999999851
Q ss_pred -----CCCCCcHHHHHHHHcCCeEEecCCC
Q 044542 367 -----RPQGLDLTLIEAMHCGRTVLTPNYP 391 (465)
Q Consensus 367 -----~~eg~~~~~~EAma~G~PvI~s~~g 391 (465)
..-++--.+-|+...|+|++.+..|
T Consensus 93 ~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG 122 (229)
T 1fy2_A 93 LLKESRERGLLAPMADRVKRGALYIGWSAG 122 (229)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCEEEEETHH
T ss_pred HHHHHHHCChHHHHHHHHHcCCEEEEECHH
Confidence 1124555778888899999987543
No 397
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=29.98 E-value=1.4e+02 Score=21.95 Aligned_cols=67 Identities=7% Similarity=0.087 Sum_probs=43.3
Q ss_pred cCeEEecccCCCCCcHHHHHHHHc----CCeEEe-cCCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 358 LDVFVNPTLRPQGLDLTLIEAMHC----GRTVLT-PNYPSIV--RTVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 358 aDv~v~ps~~~eg~~~~~~EAma~----G~PvI~-s~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
.|++++--.-++.-|..+++.+.. ..|||. |...... .+....|..+++..| +.++|.+++.+++..
T Consensus 53 ~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~~~~~ 127 (133)
T 2r25_B 53 YNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMNGFLSKPIKRPKLKTILTEFCAA 127 (133)
T ss_dssp CSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHCTT
T ss_pred CCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHh
Confidence 588887432234456777777742 457764 4333221 123445778999999 999999999988654
No 398
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=29.97 E-value=90 Score=23.78 Aligned_cols=34 Identities=12% Similarity=0.101 Sum_probs=24.7
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEe
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT 120 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 120 (465)
..++||+++... ......+...|.+.|++|..+.
T Consensus 12 ~~~~~ILivdd~----------~~~~~~l~~~L~~~g~~v~~~~ 45 (153)
T 3hv2_A 12 TRRPEILLVDSQ----------EVILQRLQQLLSPLPYTLHFAR 45 (153)
T ss_dssp CSCCEEEEECSC----------HHHHHHHHHHHTTSSCEEEEES
T ss_pred cCCceEEEECCC----------HHHHHHHHHHhcccCcEEEEEC
Confidence 346799999764 3456677888888899887554
No 399
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=29.75 E-value=81 Score=27.10 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=24.1
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|+++|+. ..||+++ .+++.|.++|++|.++...
T Consensus 9 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 41 (259)
T 4e6p_A 9 KSALITG------SARGIGR---AFAEAYVREGATVAIADID 41 (259)
T ss_dssp CEEEEET------CSSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCcHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 5666664 3477755 6889999999999887643
No 400
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=29.75 E-value=1.7e+02 Score=22.76 Aligned_cols=49 Identities=10% Similarity=0.120 Sum_probs=33.8
Q ss_pred CCCCCceeEEEEeCC--CC---CCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 74 GPTFEKLKLAVFSKT--WP---IGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 74 ~~~~~~mkIl~v~~~--~p---~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.|..++..+++|.+. |. .....-|.+.=+..|.+.|.+.|++|.+....
T Consensus 10 ~m~~~~rG~alIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dl 63 (146)
T 2dko_A 10 KMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDL 63 (146)
T ss_dssp CCCSSEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCceEEEEEeccccCCCCCcccCCCCHHHHHHHHHHHHHCCCEEEEeeCC
Confidence 334445556665543 32 11345788889999999999999999988754
No 401
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=29.72 E-value=1.5e+02 Score=26.47 Aligned_cols=105 Identities=8% Similarity=-0.017 Sum_probs=59.4
Q ss_pred hHHHHHHHhcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCcceeee-ee------CCceEEeCC-CHHHHHHHHHH
Q 044542 349 HQLSEFYNALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSIVRTVV-VN------EELGYTFSP-NVKSFVEALEL 420 (465)
Q Consensus 349 ~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~~~e~v-~~------~~~G~l~~~-d~~~la~~i~~ 420 (465)
..-..-++.||++|.-...-|+|=-.+++... +.++|.... ++. .+- .+ ...-+..++ +...+++.|.+
T Consensus 72 p~d~~~l~~ADlvv~nG~~lE~wl~k~~~~~~-~~~~v~~s~-gi~-~~~~~~~~~~~~~DPHvWldp~n~~~~a~~I~~ 148 (307)
T 3ujp_A 72 PSDIVKAQDADLILYNGMNLERWFEQFLGNVK-DVPSVVLTE-GIE-PIPIADGPYTDKPNPHAWMSPRNALVYVENIRQ 148 (307)
T ss_dssp HHHHHHHHHCSEEEECCTTSSTTHHHHHHTSC-SCCEEETTT-TCC-CCBCCSSSSTTSBCCCCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCEEEEcCCChHHHHHHHHHhCC-CCCEEEeeC-Ccc-ccccccccCCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 44457788899999865434777667776553 456654332 222 110 00 011234444 56666666666
Q ss_pred HHh-CChHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 044542 421 VIR-DGPKVLQRKGLACKEHALSMFTATKMASAYERFFLR 459 (465)
Q Consensus 421 ll~-~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 459 (465)
.+. -+|+......+++.++..+ ++.+-+++.+.+..
T Consensus 149 ~L~~~DP~~a~~Y~~Na~~~~~~---L~~Ld~~~~~~l~~ 185 (307)
T 3ujp_A 149 AFVELDPDNAKYYNANAAVYSEQ---LKAIDRQLGADLEQ 185 (307)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHH---HHHHHHHHHHHHSS
T ss_pred HHHHhCchhHHHHHHHHHHHHHH---HHHHHHHHHHHHhh
Confidence 554 1266667777777777655 55555666555543
No 402
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=29.71 E-value=43 Score=31.09 Aligned_cols=34 Identities=12% Similarity=0.112 Sum_probs=23.1
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTA 121 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 121 (465)
..|+|++... .|.+ =..+++.|.++|++|.++..
T Consensus 10 ~~~~vlVTG~-------tGfI---G~~l~~~L~~~G~~V~~~~r 43 (404)
T 1i24_A 10 HGSRVMVIGG-------DGYC---GWATALHLSKKNYEVCIVDN 43 (404)
T ss_dssp --CEEEEETT-------TSHH---HHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEEeCC-------CcHH---HHHHHHHHHhCCCeEEEEEe
Confidence 3568887632 2444 44678889999999998864
No 403
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=29.62 E-value=51 Score=27.83 Aligned_cols=36 Identities=14% Similarity=0.265 Sum_probs=25.4
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCc--EEEEEeCCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGH--EIHVFTAPSD 124 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~--~V~v~~~~~~ 124 (465)
.|+|++.. ..||+++ .+++.|.+.|+ +|.++.....
T Consensus 18 ~~~vlVtG-------asg~iG~---~l~~~L~~~G~~~~V~~~~r~~~ 55 (242)
T 2bka_A 18 NKSVFILG-------ASGETGR---VLLKEILEQGLFSKVTLIGRRKL 55 (242)
T ss_dssp CCEEEEEC-------TTSHHHH---HHHHHHHHHTCCSEEEEEESSCC
T ss_pred CCeEEEEC-------CCcHHHH---HHHHHHHcCCCCCEEEEEEcCCC
Confidence 45666653 3477655 57888889999 9999876543
No 404
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=29.62 E-value=70 Score=29.20 Aligned_cols=40 Identities=13% Similarity=0.144 Sum_probs=29.5
Q ss_pred cee-EEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLK-LAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mk-Il~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|| |++++.. ..-|-...+.+++..|++.|++|.++..+.
T Consensus 24 ~~~~i~v~sgK-----GGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 24 DGTKYIMFGGK-----GGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp CSCEEEEEECS-----SSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred CCCEEEEEeCC-----CCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 445 5555442 334566778899999999999999999876
No 405
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=29.57 E-value=42 Score=29.82 Aligned_cols=33 Identities=12% Similarity=0.059 Sum_probs=22.9
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|+|++.. ..|+++. .+++.|.++||+|.++...
T Consensus 3 ~~vlVtG-------atG~iG~---~l~~~L~~~g~~V~~~~r~ 35 (315)
T 2ydy_A 3 RRVLVTG-------ATGLLGR---AVHKEFQQNNWHAVGCGFR 35 (315)
T ss_dssp CEEEEET-------TTSHHHH---HHHHHHHTTTCEEEEEC--
T ss_pred CeEEEEC-------CCcHHHH---HHHHHHHhCCCeEEEEccC
Confidence 5777663 3366654 6788899999999988743
No 406
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=29.50 E-value=57 Score=30.12 Aligned_cols=35 Identities=14% Similarity=0.280 Sum_probs=24.8
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHH-hCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALA-ARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~-~~G~~V~v~~~~~ 123 (465)
.|+|++.. ..|+++. .+++.|. +.|++|.++....
T Consensus 2 ~m~vlVTG-------atG~iG~---~l~~~L~~~~g~~V~~~~r~~ 37 (397)
T 1gy8_A 2 HMRVLVCG-------GAGYIGS---HFVRALLRDTNHSVVIVDSLV 37 (397)
T ss_dssp CCEEEEET-------TTSHHHH---HHHHHHHHHCCCEEEEEECCT
T ss_pred CCEEEEEC-------CCCHHHH---HHHHHHHHhCCCEEEEEecCC
Confidence 36877663 3366654 6778888 8999999987543
No 407
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=29.44 E-value=37 Score=30.49 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=23.3
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|||+++... ..|+ .++..|++.|++|+++....
T Consensus 3 mkI~IiGaG-----aiG~------~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAG-----ALGL------YYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCS-----TTHH------HHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcC-----HHHH------HHHHHHHHCCCeEEEEEcCc
Confidence 799999642 2333 36778888999999988653
No 408
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=29.44 E-value=57 Score=29.26 Aligned_cols=35 Identities=17% Similarity=0.189 Sum_probs=23.9
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.|||++.. ..|+++. .+++.|.++||+|.++....
T Consensus 9 ~~~vlVTG-------atGfIG~---~l~~~Ll~~G~~V~~~~r~~ 43 (338)
T 2rh8_A 9 KKTACVVG-------GTGFVAS---LLVKLLLQKGYAVNTTVRDP 43 (338)
T ss_dssp CCEEEEEC-------TTSHHHH---HHHHHHHHTTCEEEEEESCT
T ss_pred CCEEEEEC-------CchHHHH---HHHHHHHHCCCEEEEEEcCc
Confidence 35666553 3366654 57888889999998876543
No 409
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=29.38 E-value=39 Score=31.16 Aligned_cols=45 Identities=11% Similarity=0.111 Sum_probs=30.2
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
.+|||+++....- ....-.-.....++++|.+.||+|+.+.....
T Consensus 2 ~~~~v~vl~GG~S--~E~evSl~S~~~v~~al~~~~~~v~~i~i~~~ 46 (364)
T 3i12_A 2 AKLRVGIVFGGKS--AEHEVSLQSAKNIVDAIDKTRFDVVLLGIDKA 46 (364)
T ss_dssp CCEEEEEEEECSS--TTHHHHHHHHHHHHHHSCTTTEEEEEEEECTT
T ss_pred CccEEEEEeccCC--CCccchHHHHHHHHHHHhhcCCeEEEEEECCC
Confidence 5789999986531 11111113456788999999999999886543
No 410
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=29.37 E-value=35 Score=29.63 Aligned_cols=34 Identities=12% Similarity=0.081 Sum_probs=24.7
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|+++|+. ..||+++ .+++.|.+.|++|.++....
T Consensus 28 k~vlVTG------as~gIG~---aia~~l~~~G~~V~~~~r~~ 61 (260)
T 3gem_A 28 APILITG------ASQRVGL---HCALRLLEHGHRVIISYRTE 61 (260)
T ss_dssp CCEEESS------TTSHHHH---HHHHHHHHTTCCEEEEESSC
T ss_pred CEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEeCCh
Confidence 5566654 3477654 68899999999998887654
No 411
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=29.20 E-value=37 Score=29.89 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=22.9
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|||++... .|+.+. .+++.|. +||+|.++....
T Consensus 1 m~ilVtGa-------tG~iG~---~l~~~L~-~g~~V~~~~r~~ 33 (299)
T 1n2s_A 1 MNILLFGK-------TGQVGW---ELQRSLA-PVGNLIALDVHS 33 (299)
T ss_dssp CEEEEECT-------TSHHHH---HHHHHTT-TTSEEEEECTTC
T ss_pred CeEEEECC-------CCHHHH---HHHHHhh-cCCeEEEecccc
Confidence 68877632 355544 5778888 799999987543
No 412
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=29.19 E-value=1e+02 Score=27.69 Aligned_cols=89 Identities=13% Similarity=0.142 Sum_probs=49.1
Q ss_pred EEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc--CCeEEcCCCChhHHHHHHH--hcCeEEe
Q 044542 288 LVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG--QNVKVLGALEAHQLSEFYN--ALDVFVN 363 (465)
Q Consensus 288 ~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~--~~V~~~g~v~~~~~~~~~~--~aDv~v~ 363 (465)
+.++++|--.- | ..+++++... ++++++-+-+.. .+..+++. -.+ . .-..++.+++. ..|+++.
T Consensus 6 ~~igiiG~G~~--g-~~~~~~l~~~----~~~~l~av~d~~-~~~~~~~~~~~~~---~-~~~~~~~~ll~~~~~D~V~i 73 (330)
T 3e9m_A 6 IRYGIMSTAQI--V-PRFVAGLRES----AQAEVRGIASRR-LENAQKMAKELAI---P-VAYGSYEELCKDETIDIIYI 73 (330)
T ss_dssp EEEEECSCCTT--H-HHHHHHHHHS----SSEEEEEEBCSS-SHHHHHHHHHTTC---C-CCBSSHHHHHHCTTCSEEEE
T ss_pred EEEEEECchHH--H-HHHHHHHHhC----CCcEEEEEEeCC-HHHHHHHHHHcCC---C-ceeCCHHHHhcCCCCCEEEE
Confidence 56666664211 1 2345555544 677777554422 22222222 111 0 11256777787 7899888
Q ss_pred cccCCCCCcHHHHHHHHcCCeEEecC
Q 044542 364 PTLRPQGLDLTLIEAMHCGRTVLTPN 389 (465)
Q Consensus 364 ps~~~eg~~~~~~EAma~G~PvI~s~ 389 (465)
.+.. ..-.-.+.+|+..|++|++-+
T Consensus 74 ~tp~-~~h~~~~~~al~~gk~vl~EK 98 (330)
T 3e9m_A 74 PTYN-QGHYSAAKLALSQGKPVLLEK 98 (330)
T ss_dssp CCCG-GGHHHHHHHHHHTTCCEEECS
T ss_pred cCCC-HHHHHHHHHHHHCCCeEEEeC
Confidence 6542 222335678999999999855
No 413
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=29.10 E-value=72 Score=24.13 Aligned_cols=35 Identities=17% Similarity=0.304 Sum_probs=21.0
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEe
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFT 120 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~ 120 (465)
..+.|||+++-.. ......+...|.+.|++|..+.
T Consensus 11 ~~~~~~iLivdd~----------~~~~~~l~~~L~~~g~~v~~~~ 45 (143)
T 3m6m_D 11 RVRSMRMLVADDH----------EANRMVLQRLLEKAGHKVLCVN 45 (143)
T ss_dssp ----CEEEEECSS----------HHHHHHHHHHHHC--CEEEEES
T ss_pred ccccceEEEEeCC----------HHHHHHHHHHHHHcCCeEEEeC
Confidence 3456899999764 3445667777888899887643
No 414
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=29.09 E-value=59 Score=29.30 Aligned_cols=38 Identities=11% Similarity=0.101 Sum_probs=29.2
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|++++.. ..-|-...+.+++.+|++.|++|.++..+.
T Consensus 15 ~i~v~sgK-----GGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 15 TFVFIGGK-----GGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp EEEEEEES-----TTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred EEEEEeCC-----CCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 45555542 334666788999999999999999999876
No 415
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=29.06 E-value=77 Score=28.79 Aligned_cols=41 Identities=12% Similarity=0.150 Sum_probs=32.0
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.+++|++++.. ..-|-.....+++.+|++.|.+|.++..+.
T Consensus 14 ~~~~i~~~sgk-----GGvGKTt~a~~lA~~la~~g~~vllid~D~ 54 (334)
T 3iqw_A 14 RSLRWIFVGGK-----GGVGKTTTSCSLAIQLAKVRRSVLLLSTDP 54 (334)
T ss_dssp TTCCEEEEECS-----TTSSHHHHHHHHHHHHTTSSSCEEEEECCS
T ss_pred CCeEEEEEeCC-----CCccHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 34688887753 334556778899999999999999999874
No 416
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=28.97 E-value=54 Score=25.75 Aligned_cols=34 Identities=21% Similarity=0.121 Sum_probs=24.8
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTA 121 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 121 (465)
|||++-+.. +|.+. =..+.+.|.+.||+|.=+-+
T Consensus 2 MkIaigsDh-------aG~~l-K~~i~~~L~~~G~eV~D~G~ 35 (149)
T 2vvr_A 2 KKIAFGCDH-------VGFIL-KHEIVAHLVERGVEVIDKGT 35 (149)
T ss_dssp CEEEEEECT-------TGGGG-HHHHHHHHHHTTCEEEECCC
T ss_pred cEEEEEeCc-------hhHHH-HHHHHHHHHHCCCEEEEeCC
Confidence 899887754 55443 34588899999999887744
No 417
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=28.84 E-value=43 Score=30.86 Aligned_cols=34 Identities=21% Similarity=0.442 Sum_probs=24.9
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+.|||++|.. |-+ -..++..|.+.||+|.++...
T Consensus 21 ~~mkIgiIGl--------G~m---G~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 21 QSMQIGMIGL--------GRM---GADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp -CCEEEEECC--------SHH---HHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECc--------hHH---HHHHHHHHHhCCCEEEEEeCC
Confidence 4589999953 333 346888999999999988654
No 418
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=28.84 E-value=49 Score=29.67 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=27.9
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+||+++.+. ..+.....+..+.+.|.++|++|.+....
T Consensus 5 ~ki~iI~n~-----~~~~~~~~~~~l~~~L~~~g~~v~~~~~~ 42 (307)
T 1u0t_A 5 RSVLLVVHT-----GRDEATETARRVEKVLGDNKIALRVLSAE 42 (307)
T ss_dssp CEEEEEESS-----SGGGGSHHHHHHHHHHHTTTCEEEEEC--
T ss_pred CEEEEEEeC-----CCHHHHHHHHHHHHHHHHCCCEEEEecch
Confidence 479999873 23444567889999999999998876544
No 419
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=28.76 E-value=62 Score=28.70 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=24.3
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|+++|+. ..||+++ .+++.|.++|++|.+....
T Consensus 32 k~vlVTG------as~gIG~---~la~~l~~~G~~V~~~~r~ 64 (301)
T 3tjr_A 32 RAAVVTG------GASGIGL---ATATEFARRGARLVLSDVD 64 (301)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeC------CCCHHHH---HHHHHHHHCCCEEEEEECC
Confidence 5666664 3477654 6889999999998887654
No 420
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=28.74 E-value=54 Score=28.56 Aligned_cols=33 Identities=24% Similarity=0.349 Sum_probs=24.7
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|+++|+. ..||+++ .+++.|.++|++|.++...
T Consensus 29 k~~lVTG------as~GIG~---aia~~la~~G~~V~~~~r~ 61 (270)
T 3ftp_A 29 QVAIVTG------ASRGIGR---AIALELARRGAMVIGTATT 61 (270)
T ss_dssp CEEEETT------CSSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 6777764 3477754 6889999999999887654
No 421
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=28.65 E-value=1.6e+02 Score=23.92 Aligned_cols=49 Identities=12% Similarity=0.135 Sum_probs=34.4
Q ss_pred CCCCCceeEEEEe-C-CCC---CCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 74 GPTFEKLKLAVFS-K-TWP---IGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 74 ~~~~~~mkIl~v~-~-~~p---~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.|..++..+++|. + .|. ..+...|.+.-...|.+.|.+.|++|.+...-
T Consensus 38 ~m~~~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LGF~V~~~~dl 91 (179)
T 3p45_A 38 KMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDL 91 (179)
T ss_dssp CCCSSBCCEEEEEECCSCCGGGCCCCCTTHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCccCEEEEEeCcccCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4444555555554 3 232 22467788999999999999999999988743
No 422
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=28.51 E-value=44 Score=30.07 Aligned_cols=26 Identities=19% Similarity=0.172 Sum_probs=19.2
Q ss_pred CChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 95 PGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 95 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.|+++. .+++.|.++||+|.++....
T Consensus 14 tGfIG~---~l~~~L~~~G~~V~~~~r~~ 39 (337)
T 2c29_D 14 SGFIGS---WLVMRLLERGYTVRATVRDP 39 (337)
T ss_dssp TSHHHH---HHHHHHHHTTCEEEEEESCT
T ss_pred chHHHH---HHHHHHHHCCCEEEEEECCc
Confidence 466654 57788889999998876543
No 423
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=28.45 E-value=1.2e+02 Score=28.05 Aligned_cols=88 Identities=16% Similarity=0.189 Sum_probs=48.5
Q ss_pred EEEEEeecc-ccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhc--CCeEEcCCCChhHHHHHHHh--cCeEE
Q 044542 288 LVMGVAGRL-VRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELG--QNVKVLGALEAHQLSEFYNA--LDVFV 362 (465)
Q Consensus 288 ~~l~~~Grl-~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~--~~V~~~g~v~~~~~~~~~~~--aDv~v 362 (465)
+.++++|-- .-.+ ..+.++... ++++++-+-+.. .+..+++. -.+.. ..++.++++. .|+++
T Consensus 3 ~rigiiG~G~~~~~---~~~~~l~~~----~~~~l~av~d~~-~~~~~~~a~~~g~~~-----~~~~~ell~~~~vD~V~ 69 (387)
T 3moi_A 3 IRFGICGLGFAGSV---LMAPAMRHH----PDAQIVAACDPN-EDVRERFGKEYGIPV-----FATLAEMMQHVQMDAVY 69 (387)
T ss_dssp EEEEEECCSHHHHT---THHHHHHHC----TTEEEEEEECSC-HHHHHHHHHHHTCCE-----ESSHHHHHHHSCCSEEE
T ss_pred eEEEEEeCCHHHHH---HHHHHHHhC----CCeEEEEEEeCC-HHHHHHHHHHcCCCe-----ECCHHHHHcCCCCCEEE
Confidence 556666643 1122 234454443 677777555432 22222222 12221 2456677765 89999
Q ss_pred ecccCCCCCcHHHHHHHHcCCeEEecC
Q 044542 363 NPTLRPQGLDLTLIEAMHCGRTVLTPN 389 (465)
Q Consensus 363 ~ps~~~eg~~~~~~EAma~G~PvI~s~ 389 (465)
..+.. ..-.-.+.+|+..|++|++-+
T Consensus 70 i~tp~-~~H~~~~~~al~aGk~Vl~EK 95 (387)
T 3moi_A 70 IASPH-QFHCEHVVQASEQGLHIIVEK 95 (387)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEEECS
T ss_pred EcCCc-HHHHHHHHHHHHCCCceeeeC
Confidence 86542 222346778999999999855
No 424
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=28.37 E-value=48 Score=28.96 Aligned_cols=35 Identities=26% Similarity=0.304 Sum_probs=25.5
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
..|+++|+. ..||+++ .+++.|.++|++|.+....
T Consensus 27 ~~k~~lVTG------as~GIG~---aia~~la~~G~~V~~~~r~ 61 (272)
T 4dyv_A 27 GKKIAIVTG------AGSGVGR---AVAVALAGAGYGVALAGRR 61 (272)
T ss_dssp -CCEEEETT------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeC------CCcHHHH---HHHHHHHHCCCEEEEEECC
Confidence 347888874 3467655 7889999999998887654
No 425
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=28.28 E-value=1.7e+02 Score=21.24 Aligned_cols=68 Identities=9% Similarity=0.113 Sum_probs=43.2
Q ss_pred hcCeEEecccCCCCCcHHHHHHHHc---CCeEEec-CCCCc--ceeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 357 ALDVFVNPTLRPQGLDLTLIEAMHC---GRTVLTP-NYPSI--VRTVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 357 ~aDv~v~ps~~~eg~~~~~~EAma~---G~PvI~s-~~gg~--~~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
..|++++-...++.-|..+++.+.. ..|+|.. ..... ..+....|..+++..| +.+++.++|..++..
T Consensus 46 ~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~~ 120 (134)
T 3f6c_A 46 KPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKNG 120 (134)
T ss_dssp CCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSEEEEGGGCTHHHHHHHHHHHTT
T ss_pred CCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCCCChHHHHHHHHhCCCEEEeCCCCHHHHHHHHHHHHCC
Confidence 3677776433334556677776653 5677643 22211 1123455778899999 999999999999875
No 426
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=28.19 E-value=89 Score=29.39 Aligned_cols=36 Identities=11% Similarity=0.141 Sum_probs=26.4
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
.+|||+++.. |. ....+++++++.|++|.++.....
T Consensus 18 ~~~~ili~g~--------g~---~g~~~~~a~~~~G~~v~~v~~~~~ 53 (433)
T 2dwc_A 18 SAQKILLLGS--------GE---LGKEIAIEAQRLGVEVVAVDRYAN 53 (433)
T ss_dssp TCCEEEEESC--------SH---HHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECC--------CH---HHHHHHHHHHHCCCEEEEEECCCC
Confidence 4578998842 21 345778999999999999887653
No 427
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=28.14 E-value=83 Score=29.34 Aligned_cols=40 Identities=20% Similarity=0.207 Sum_probs=32.1
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
++|||+++..+ ..|..+..+..+++.+.+.|++|.++...
T Consensus 255 ~~~kv~iiy~S-----~~GnT~~la~~i~~~l~~~g~~v~~~~l~ 294 (414)
T 2q9u_A 255 CQKKVTVVLDS-----MYGTTHRMALALLDGARSTGCETVLLEMT 294 (414)
T ss_dssp CCSEEEEEECC-----SSSHHHHHHHHHHHHHHHTTCEEEEEEGG
T ss_pred cCCeEEEEEEC-----CCchHHHHHHHHHHHHHhCCCeEEEEEcC
Confidence 35789888764 45888888999999999899999888654
No 428
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=28.06 E-value=24 Score=30.43 Aligned_cols=34 Identities=12% Similarity=0.082 Sum_probs=24.1
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
||+++|+. ..||+++ .+++.|.++|++|.++...
T Consensus 1 Mk~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 34 (254)
T 1zmt_A 1 MSTAIVTN------VKHFGGM---GSALRLSEAGHTVACHDES 34 (254)
T ss_dssp -CEEEESS------TTSTTHH---HHHHHHHHTTCEEEECCGG
T ss_pred CeEEEEeC------CCchHHH---HHHHHHHHCCCEEEEEeCC
Confidence 67777774 3466654 6888999999998876543
No 429
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=28.04 E-value=65 Score=27.84 Aligned_cols=33 Identities=24% Similarity=0.315 Sum_probs=25.8
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|+++|+. ..+|+.+ .+++.|++.|.+|.+....
T Consensus 10 KvalVTG------as~GIG~---aiA~~la~~Ga~Vvi~~r~ 42 (247)
T 4hp8_A 10 RKALVTG------ANTGLGQ---AIAVGLAAAGAEVVCAARR 42 (247)
T ss_dssp CEEEETT------TTSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeC------cCCHHHH---HHHHHHHHcCCEEEEEeCC
Confidence 7899985 3467755 6889999999999887654
No 430
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=27.84 E-value=69 Score=26.09 Aligned_cols=37 Identities=19% Similarity=0.224 Sum_probs=26.6
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCC--cEEEEEeCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARG--HEIHVFTAP 122 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~ 122 (465)
.+|||.+=+.. +|.+. =..+.+.|.+.| |+|.=+...
T Consensus 28 ~~MkIaIgsDH-------aG~~L-K~~i~~~L~~~G~g~eV~D~G~~ 66 (184)
T 3sgw_A 28 PPLRLAIACDD-------AGVSY-KEALKAHLSDNPLVSSITDVGVT 66 (184)
T ss_dssp CCEEEEEEECG-------GGHHH-HHHHHHHHTTCTTEEEEEECSCC
T ss_pred CCcEEEEEECc-------hhHHH-HHHHHHHHHhCCCCcEEEEcCCC
Confidence 57999988764 56543 457888899999 687766543
No 431
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=27.80 E-value=94 Score=23.64 Aligned_cols=35 Identities=3% Similarity=0.048 Sum_probs=23.2
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHh-CCcEEEEEe
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAA-RGHEIHVFT 120 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~ 120 (465)
++.+|||+++... ......+...|.+ .|++|...+
T Consensus 2 ~~~~~~ILivdd~----------~~~~~~l~~~L~~~~~~~v~~~~ 37 (153)
T 3cz5_A 2 SLSTARIMLVDDH----------PIVREGYRRLIERRPGYAVVAEA 37 (153)
T ss_dssp --CCEEEEEECSC----------HHHHHHHHHHHTTSTTEEEEEEE
T ss_pred CCcccEEEEECCc----------HHHHHHHHHHHhhCCCcEEEEEe
Confidence 4567899999764 3455667777877 688876333
No 432
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=27.76 E-value=89 Score=26.90 Aligned_cols=42 Identities=17% Similarity=0.063 Sum_probs=25.8
Q ss_pred HHHHHH-hcCeEEecccCCCCCcHHHHHHHHcCCeEEecCCCCc
Q 044542 351 LSEFYN-ALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPNYPSI 393 (465)
Q Consensus 351 ~~~~~~-~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~~gg~ 393 (465)
+.+++. .+|++|--+. ++..--.+..+...|+|+|...+|-.
T Consensus 38 l~~~~~~~~DvvIDfT~-p~a~~~~~~~a~~~g~~~VigTTG~~ 80 (245)
T 1p9l_A 38 LSLLTDGNTEVVIDFTH-PDVVMGNLEFLIDNGIHAVVGTTGFT 80 (245)
T ss_dssp THHHHHTTCCEEEECSC-TTTHHHHHHHHHHTTCEEEECCCCCC
T ss_pred HHHHhccCCcEEEEccC-hHHHHHHHHHHHHcCCCEEEcCCCCC
Confidence 444444 7899885442 35443344456888999988665533
No 433
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=27.76 E-value=1.4e+02 Score=26.16 Aligned_cols=50 Identities=8% Similarity=-0.022 Sum_probs=35.5
Q ss_pred CCCCCceeEEEEeC--CCCC---CCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 74 GPTFEKLKLAVFSK--TWPI---GAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 74 ~~~~~~mkIl~v~~--~~p~---~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.|..++..+++|.. .|.. -+..-|...=+..|.+.|.+.|++|++...-.
T Consensus 15 ~m~~~~rg~aLIInn~~f~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt 69 (277)
T 1nw9_B 15 ILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLT 69 (277)
T ss_dssp CCCCSSCEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTEEEEEEESCC
T ss_pred eCCCCcccEEEEEeCcccCCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 45555556666654 3421 13567888999999999999999999876543
No 434
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=27.74 E-value=59 Score=27.58 Aligned_cols=25 Identities=20% Similarity=0.377 Sum_probs=19.1
Q ss_pred CChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 95 PGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 95 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.||+++ .+++.|.++|++|.++...
T Consensus 14 sggiG~---~~a~~l~~~G~~V~~~~~r 38 (247)
T 2hq1_A 14 SRGLGK---AIAWKLGNMGANIVLNGSP 38 (247)
T ss_dssp SSHHHH---HHHHHHHHTTCEEEEEECT
T ss_pred CchHHH---HHHHHHHHCCCEEEEEcCc
Confidence 477654 6888999999999887543
No 435
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=27.73 E-value=43 Score=30.47 Aligned_cols=36 Identities=22% Similarity=0.276 Sum_probs=23.8
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCC-cEEEEEeCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARG-HEIHVFTAPS 123 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~ 123 (465)
..|+|++.. ..|+++. .+++.|.+.| ++|.++....
T Consensus 45 ~~~~vlVtG-------atG~iG~---~l~~~L~~~g~~~V~~~~r~~ 81 (357)
T 2x6t_A 45 EGRMIIVTG-------GAGFIGS---NIVKALNDKGITDILVVDNLK 81 (357)
T ss_dssp ---CEEEET-------TTSHHHH---HHHHHHHHTTCCCEEEEECCS
T ss_pred CCCEEEEEC-------CCcHHHH---HHHHHHHHCCCcEEEEEecCC
Confidence 457787763 2366554 6788899999 9999887653
No 436
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=27.69 E-value=39 Score=28.38 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=23.5
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
..|||+++.. |.++ ..+++.|.+.|++|.++...
T Consensus 27 ~~~~I~iiG~--------G~~G---~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGS--------GDFA---RSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECC--------SHHH---HHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEcc--------CHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 4679999842 4443 45778888899999887654
No 437
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=27.61 E-value=55 Score=33.24 Aligned_cols=38 Identities=16% Similarity=0.033 Sum_probs=24.8
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.+..|+|++.. ..|+++. .+++.|.+.|++|.++....
T Consensus 8 ~~~~~~ilVTG-------atG~IG~---~l~~~L~~~G~~V~~~~r~~ 45 (699)
T 1z45_A 8 ESTSKIVLVTG-------GAGYIGS---HTVVELIENGYDCVVADNLS 45 (699)
T ss_dssp ---CCEEEEET-------TTSHHHH---HHHHHHHHTTCEEEEEECCS
T ss_pred ccCCCEEEEEC-------CCCHHHH---HHHHHHHHCcCEEEEEECCC
Confidence 34456777653 3366654 67888889999999987543
No 438
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=27.60 E-value=54 Score=27.82 Aligned_cols=33 Identities=18% Similarity=0.382 Sum_probs=23.3
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|+++|+. ..||+++ .+++.|.++|++|.++...
T Consensus 8 ~~vlVtG------asggiG~---~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 8 KVSLVTG------STRGIGR---AIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp CEEEETT------CSSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEC------CCchHHH---HHHHHHHHCCCEEEEEeCC
Confidence 4555553 3467655 6788899999999888654
No 439
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=27.54 E-value=55 Score=27.28 Aligned_cols=34 Identities=24% Similarity=0.606 Sum_probs=23.6
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
..|||+++.. |.+ -..++..|.+.|++|.++...
T Consensus 18 ~~~~I~iiG~--------G~m---G~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 18 QGMEITIFGK--------GNM---GQAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp --CEEEEECC--------SHH---HHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECC--------CHH---HHHHHHHHHHCCCEEEEEcCC
Confidence 4679999853 333 346788889999999988543
No 440
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=27.52 E-value=78 Score=27.73 Aligned_cols=40 Identities=15% Similarity=0.209 Sum_probs=30.2
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
||++.|+. ...-|-.+.+.+|+.+|++.|++|.++-.+..
T Consensus 2 MkvIavs~-----KGGvGKTT~a~nLA~~La~~G~rVlliD~D~q 41 (289)
T 2afh_E 2 MRQCAIYG-----KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK 41 (289)
T ss_dssp CEEEEEEE-----CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred ceEEEEeC-----CCcCcHHHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 67666653 23346677889999999999999999877654
No 441
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=27.49 E-value=1.6e+02 Score=25.32 Aligned_cols=49 Identities=10% Similarity=0.137 Sum_probs=35.2
Q ss_pred CCCCCceeEEEEeCC--CCC---CCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 74 GPTFEKLKLAVFSKT--WPI---GAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 74 ~~~~~~mkIl~v~~~--~p~---~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.|..++.++++|... |.. .+..-|...=+..|.+.|.+.|++|++...-
T Consensus 10 ~m~~~~rg~aLIInn~~f~~~~~l~~r~g~~~D~~~l~~~f~~LgF~V~~~~dl 63 (250)
T 2j32_A 10 KMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDL 63 (250)
T ss_dssp CCCSSEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCccEEEEEechhcCCCCCCcCCCCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 445556677766543 421 1356788888999999999999999988644
No 442
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=27.46 E-value=26 Score=29.58 Aligned_cols=98 Identities=10% Similarity=0.013 Sum_probs=48.9
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHh-CCcEEEEEeCCCCCCCCCc-ccCCcceEEEeecCCC-------
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAA-RGHEIHVFTAPSDRKPHND-VHQGNLHVHFAANDHG------- 146 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~~~~~~~~~-~~~~~~~v~~~~~~~~------- 146 (465)
+..+|||+++... +| ..+..+.+++.+ .+++|..+.++.. ....+ -...+..+........
T Consensus 9 ~~~~~ri~vl~SG-------~g--snl~all~~~~~~~~~eI~~Vis~~~-a~~~~~A~~~gIp~~~~~~~~~~~r~~~d 78 (215)
T 3da8_A 9 PSAPARLVVLASG-------TG--SLLRSLLDAAVGDYPARVVAVGVDRE-CRAAEIAAEASVPVFTVRLADHPSRDAWD 78 (215)
T ss_dssp CCSSEEEEEEESS-------CC--HHHHHHHHHSSTTCSEEEEEEEESSC-CHHHHHHHHTTCCEEECCGGGSSSHHHHH
T ss_pred CCCCcEEEEEEeC-------Ch--HHHHHHHHHHhccCCCeEEEEEeCCc-hHHHHHHHHcCCCEEEeCcccccchhhhh
Confidence 4457899998653 22 345666666644 3468776666653 21111 1222333333322110
Q ss_pred --ccccCCCCCCcEEEecCCc--hhHHhhhcCCcEEEEecc
Q 044542 147 --SVNLNNDGAFDYVHTESVS--LPHWRAKMVPNVAVTWHG 183 (465)
Q Consensus 147 --~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 183 (465)
.....++.++|+|++-.+. ++..+-...+.-++.+|.
T Consensus 79 ~~~~~~l~~~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHp 119 (215)
T 3da8_A 79 VAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHP 119 (215)
T ss_dssp HHHHHHHHTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEES
T ss_pred HHHHHHHHhhCCCEEEEcCchhhCCHHHHhhccCCeEEeCc
Confidence 1112268899999986652 222222222224677775
No 443
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=27.45 E-value=1.5e+02 Score=25.86 Aligned_cols=49 Identities=14% Similarity=0.205 Sum_probs=35.1
Q ss_pred CCCCCceeEEEEeC--CCC--CCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 74 GPTFEKLKLAVFSK--TWP--IGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 74 ~~~~~~mkIl~v~~--~~p--~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.|..++.++++|.. .|. ..+..-|...=+..|.+.|.+.|++|++...-
T Consensus 26 ~m~~~~rg~aLIInn~~f~~~~l~~R~g~~~Da~~L~~~f~~LGF~V~~~~dl 78 (272)
T 1m72_A 26 NMNHKHRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFKVTVFPNL 78 (272)
T ss_dssp CCCSSEEEEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCCCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCEEEEecCc
Confidence 44445556766654 343 12356788999999999999999999988644
No 444
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=27.41 E-value=35 Score=31.50 Aligned_cols=91 Identities=18% Similarity=0.126 Sum_probs=49.0
Q ss_pred EEEEEeeccccccCHHHHHHHHHHhhh---cCCCeEEEEEeCCcchhHHHH----hcCCeEEcCCCChhHHHHHHHh--c
Q 044542 288 LVMGVAGRLVRDKGHPLLYEAFSSITR---DHPGVYLLVAGTGPWGRRYAE----LGQNVKVLGALEAHQLSEFYNA--L 358 (465)
Q Consensus 288 ~~l~~~Grl~~~Kg~~~ll~a~~~l~~---~~~~~~l~ivG~g~~~~~~~~----l~~~V~~~g~v~~~~~~~~~~~--a 358 (465)
+.++.+|--.-.+. .++++..+.. ...+.+++-+.+.. .+..++ ++.. .. +.++.++++. .
T Consensus 7 lrvgiIG~G~ig~~---h~~~~~~~~~~~~~~~~~~l~av~d~~-~~~a~~~a~~~g~~-~~-----~~d~~~ll~~~~i 76 (390)
T 4h3v_A 7 LGIGLIGYAFMGAA---HSQAWRSAPRFFDLPLHPDLNVLCGRD-AEAVRAAAGKLGWS-TT-----ETDWRTLLERDDV 76 (390)
T ss_dssp EEEEEECHHHHHHH---HHHHHHHHHHHSCCSSEEEEEEEECSS-HHHHHHHHHHHTCS-EE-----ESCHHHHTTCTTC
T ss_pred CcEEEEcCCHHHHH---HHHHHHhCccccccccCceEEEEEcCC-HHHHHHHHHHcCCC-cc-----cCCHHHHhcCCCC
Confidence 77777774222222 3445544432 22245666665532 333333 3311 11 1456666754 6
Q ss_pred CeEEecccCCCCCcHHHHHHHHcCCeEEecC
Q 044542 359 DVFVNPTLRPQGLDLTLIEAMHCGRTVLTPN 389 (465)
Q Consensus 359 Dv~v~ps~~~eg~~~~~~EAma~G~PvI~s~ 389 (465)
|+++..+.. ..-.-.+.+|+.+|++|++=+
T Consensus 77 DaV~I~tP~-~~H~~~~~~al~aGkhVl~EK 106 (390)
T 4h3v_A 77 QLVDVCTPG-DSHAEIAIAALEAGKHVLCEK 106 (390)
T ss_dssp SEEEECSCG-GGHHHHHHHHHHTTCEEEEES
T ss_pred CEEEEeCCh-HHHHHHHHHHHHcCCCceeec
Confidence 888876542 223346788999999999854
No 445
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=27.39 E-value=1e+02 Score=23.82 Aligned_cols=37 Identities=24% Similarity=0.362 Sum_probs=26.5
Q ss_pred eEEEEeCCCCCCCCCChHHH--HHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMER--HASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~--~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
|+++|... |..++ ....++...+..|++|.+|.....
T Consensus 9 kl~II~~s-------g~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~g 47 (144)
T 2qs7_A 9 KLSIIVFS-------GTIDKLMPVGILTSGAAASGYEVNLFFTFWG 47 (144)
T ss_dssp EEEEEECC-------CSHHHHHHHHHHHHHHHHTTCEEEEEECHHH
T ss_pred CEEEEEEc-------CCHHHHHHHHHHHHHHHHcCCcEEEEEehHH
Confidence 67777764 33444 455677777888999999987753
No 446
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=27.30 E-value=53 Score=29.54 Aligned_cols=34 Identities=15% Similarity=0.176 Sum_probs=23.9
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-CcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~ 123 (465)
|||++.. ..|+++. .+++.|.+. |++|.++....
T Consensus 1 m~vlVtG-------atG~iG~---~l~~~L~~~~g~~V~~~~r~~ 35 (345)
T 2bll_A 1 MRVLILG-------VNGFIGN---HLTERLLREDHYEVYGLDIGS 35 (345)
T ss_dssp CEEEEET-------CSSHHHH---HHHHHHHHSTTCEEEEEESCC
T ss_pred CeEEEEC-------CCcHHHH---HHHHHHHHhCCCEEEEEeCCc
Confidence 5777663 2366544 677888887 89999987653
No 447
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=27.30 E-value=53 Score=27.67 Aligned_cols=25 Identities=16% Similarity=0.296 Sum_probs=19.3
Q ss_pred CChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 95 PGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 95 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.||+++ .+++.|.++|++|.++...
T Consensus 14 sggiG~---~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 14 SRGIGE---ATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp TSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CcHHHH---HHHHHHHHCCCEEEEEECC
Confidence 466654 6888999999999887654
No 448
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=27.25 E-value=66 Score=29.17 Aligned_cols=37 Identities=16% Similarity=0.186 Sum_probs=25.2
Q ss_pred CCCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCc-EEEEEeCC
Q 044542 75 PTFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGH-EIHVFTAP 122 (465)
Q Consensus 75 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~-~V~v~~~~ 122 (465)
|..++|||+++.. |..+ ..++..|+..|+ +|.++-..
T Consensus 5 ~~~~~~kI~VIGa--------G~vG---~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 5 LVQRRKKVAMIGS--------GMIG---GTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CCSCCCEEEEECC--------SHHH---HHHHHHHHHHTCCEEEEECSS
T ss_pred cCCCCCEEEEECC--------CHHH---HHHHHHHHhCCCCeEEEEECC
Confidence 4555789999842 4433 348888888898 87666554
No 449
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=27.24 E-value=77 Score=27.23 Aligned_cols=33 Identities=27% Similarity=0.378 Sum_probs=23.9
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|+++|+. ..||+++ .+++.|.++|++|.++...
T Consensus 8 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 8 KLAVVTA------GSSGLGF---ASALELARNGARLLLFSRN 40 (260)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCchHHH---HHHHHHHHCCCEEEEEeCC
Confidence 5566664 3477754 6888999999999887654
No 450
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=27.23 E-value=41 Score=29.61 Aligned_cols=35 Identities=11% Similarity=0.199 Sum_probs=27.5
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+.|+|+++. | +......++.|.+.|++|+|+.+..
T Consensus 12 ~~k~VLVVG----------g-G~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIG----------G-GEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEE----------E-SHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEEC----------C-cHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 456899883 3 2467788899999999999998765
No 451
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=27.22 E-value=1e+02 Score=26.02 Aligned_cols=39 Identities=13% Similarity=0.142 Sum_probs=29.7
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+++|+|+-. ...|-.+.++..+++.| +.|+++.++....
T Consensus 40 ~~kv~IlYg-----S~tGnte~~A~~La~~l-~~g~~v~v~~l~~ 78 (219)
T 3hr4_A 40 RVRVTILFA-----TETGKSEALAWDLGALF-SCAFNPKVVCMDK 78 (219)
T ss_dssp SCEEEEEEE-----CSSSHHHHHHHHHHHHH-TTTSEEEEEEGGG
T ss_pred CCcEEEEEE-----CCchHHHHHHHHHHHHH-HcCCCeEEEEccc
Confidence 346666644 35699999999999988 5799999887654
No 452
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=27.08 E-value=49 Score=25.16 Aligned_cols=30 Identities=13% Similarity=0.374 Sum_probs=25.5
Q ss_pred CCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 94 APGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 94 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
..|..+..+..+++.|.+.|++|.++....
T Consensus 8 ~tGnT~~iA~~ia~~l~~~g~~v~~~~~~~ 37 (138)
T 5nul_A 8 GTGNTEKMAELIAKGIIESGKDVNTINVSD 37 (138)
T ss_dssp SSSHHHHHHHHHHHHHHHTTCCCEEEEGGG
T ss_pred CCchHHHHHHHHHHHHHHCCCeEEEEEhhh
Confidence 458888999999999999999999887654
No 453
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=27.00 E-value=1.6e+02 Score=24.08 Aligned_cols=76 Identities=11% Similarity=0.037 Sum_probs=47.1
Q ss_pred hHHHHHHHhcCeEEecccCCCCCcHHHHHHHH---cCCeEEec-CCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHHHH
Q 044542 349 HQLSEFYNALDVFVNPTLRPQGLDLTLIEAMH---CGRTVLTP-NYPSIV--RTVVVNEELGYTFSP-NVKSFVEALELV 421 (465)
Q Consensus 349 ~~~~~~~~~aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~~l 421 (465)
++....+...|++++--.-++.-|..+++.+. ..+|+|.. ...... .+.+..|..|++..| +.++|.++|..+
T Consensus 35 ~~al~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~ 114 (220)
T 1p2f_A 35 EDFLNDEEAFHVVVLDVMLPDYSGYEICRMIKETRPETWVILLTLLSDDESVLKGFEAGADDYVTKPFNPEILLARVKRF 114 (220)
T ss_dssp HHHHHCCSCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHH
Confidence 33333335678888743223445666776664 46788754 322211 123445778999999 999999999988
Q ss_pred HhC
Q 044542 422 IRD 424 (465)
Q Consensus 422 l~~ 424 (465)
+..
T Consensus 115 ~~~ 117 (220)
T 1p2f_A 115 LER 117 (220)
T ss_dssp HHH
T ss_pred Hcc
Confidence 753
No 454
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=26.99 E-value=1.9e+02 Score=23.02 Aligned_cols=67 Identities=16% Similarity=0.190 Sum_probs=40.5
Q ss_pred hcCeEEecccCCCCCcHHHHHHHH---cCCeEEe-cCCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 357 ALDVFVNPTLRPQGLDLTLIEAMH---CGRTVLT-PNYPSIV--RTVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 357 ~aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~-s~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
..|++++-..-++.-|. +.+.+. ..+|||. |..+... .+.+..|..+++..| +.++|..++..++..
T Consensus 52 ~~dlvl~D~~mp~~~g~-l~~~~~~~~~~~~ii~lt~~~~~~~~~~a~~~ga~~~l~KP~~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 52 PVDVVFTSIFQNRHHDE-IAALLAAGTPRTTLVALVEYESPAVLSQIIELECHGVITQPLDAHRVLPVLVSARRI 125 (196)
T ss_dssp CCSEEEEECCSSTHHHH-HHHHHHHSCTTCEEEEEECCCSHHHHHHHHHHTCSEEEESSCCGGGHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCccchH-HHHHHhccCCCCCEEEEEcCCChHHHHHHHHcCCCeeEecCcCHHHHHHHHHHHHHH
Confidence 46777763222121144 555554 4578875 3332211 123445778999999 999999999888765
No 455
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=26.99 E-value=51 Score=28.54 Aligned_cols=36 Identities=17% Similarity=0.209 Sum_probs=26.0
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
||.++|+. ..||+++ .+++.|.++|++|.++.....
T Consensus 3 ~k~vlVTG------asg~IG~---~la~~L~~~G~~V~~~~r~~~ 38 (267)
T 3rft_A 3 MKRLLVTG------AAGQLGR---VMRERLAPMAEILRLADLSPL 38 (267)
T ss_dssp EEEEEEES------TTSHHHH---HHHHHTGGGEEEEEEEESSCC
T ss_pred CCEEEEEC------CCCHHHH---HHHHHHHhcCCEEEEEecCCc
Confidence 56566653 3477765 578899999999998876653
No 456
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=26.95 E-value=85 Score=26.13 Aligned_cols=34 Identities=15% Similarity=0.181 Sum_probs=23.0
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEE
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVF 119 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~ 119 (465)
.+.+|||+++... ......+...|.+.|++|..+
T Consensus 4 ~~~~~~ilivdd~----------~~~~~~l~~~L~~~g~~v~~~ 37 (233)
T 1ys7_A 4 GVTSPRVLVVDDD----------SDVLASLERGLRLSGFEVATA 37 (233)
T ss_dssp ---CCEEEEECSC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCeEEEEeCC----------HHHHHHHHHHHHhCCCEEEEE
Confidence 4456899999765 344566777888889987644
No 457
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=26.94 E-value=1.4e+02 Score=26.58 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=32.1
Q ss_pred eeEEEEe-C-CCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 80 LKLAVFS-K-TWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 80 mkIl~v~-~-~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.++++|. + .|...+...|...=+..|.+.|.+.|++|.+...-
T Consensus 60 ~r~aLII~N~~f~~l~~R~G~~~Da~~L~~~f~~LGF~V~~~~dl 104 (302)
T 3e4c_A 60 TRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVKKNL 104 (302)
T ss_dssp CCEEEEEECCSCSSSCCCTTHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccEEEEEECcCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEeeCC
Confidence 4555554 3 34433467788999999999999999999988754
No 458
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=26.72 E-value=1.4e+02 Score=27.15 Aligned_cols=89 Identities=17% Similarity=0.202 Sum_probs=49.0
Q ss_pred EEEEEeeccccccCHHHHHHHHHHhhhcCCCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHHh--cCeEEecc
Q 044542 288 LVMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYNA--LDVFVNPT 365 (465)
Q Consensus 288 ~~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~~--aDv~v~ps 365 (465)
+.++.+|--.-.+ ...+.++... ++++++-+-+.. .+..++....+.. ..++.+++.. .|+++..+
T Consensus 8 ~rvgiiG~G~~g~--~~~~~~~~~~----~~~~l~av~d~~-~~~~~~~~~~~~~-----~~~~~~ll~~~~vD~V~i~t 75 (352)
T 3kux_A 8 IKVGLLGYGYASK--TFHAPLIMGT----PGLELAGVSSSD-ASKVHADWPAIPV-----VSDPQMLFNDPSIDLIVIPT 75 (352)
T ss_dssp EEEEEECCSHHHH--HTHHHHHHTS----TTEEEEEEECSC-HHHHHTTCSSCCE-----ESCHHHHHHCSSCCEEEECS
T ss_pred ceEEEECCCHHHH--HHHHHHHhhC----CCcEEEEEECCC-HHHHHhhCCCCce-----ECCHHHHhcCCCCCEEEEeC
Confidence 6677777421111 1133444333 678877555432 2223221122221 2466777776 89988866
Q ss_pred cCCCCCcHHHHHHHHcCCeEEecC
Q 044542 366 LRPQGLDLTLIEAMHCGRTVLTPN 389 (465)
Q Consensus 366 ~~~eg~~~~~~EAma~G~PvI~s~ 389 (465)
.. ..-.-.+.+|+..|++|++-+
T Consensus 76 p~-~~H~~~~~~al~aGkhV~~EK 98 (352)
T 3kux_A 76 PN-DTHFPLAQSALAAGKHVVVDK 98 (352)
T ss_dssp CT-TTHHHHHHHHHHTTCEEEECS
T ss_pred Ch-HHHHHHHHHHHHCCCcEEEEC
Confidence 43 333345678999999999844
No 459
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=26.71 E-value=80 Score=27.04 Aligned_cols=35 Identities=14% Similarity=0.264 Sum_probs=25.8
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
|+++|+. ..||+++ .+++.|.+.|++|.++.....
T Consensus 8 k~~lVTG------as~gIG~---aia~~l~~~G~~V~~~~r~~~ 42 (257)
T 3tpc_A 8 RVFIVTG------ASSGLGA---AVTRMLAQEGATVLGLDLKPP 42 (257)
T ss_dssp CEEEEES------TTSHHHH---HHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEeC------CCCHHHH---HHHHHHHHCCCEEEEEeCChH
Confidence 6677764 3477754 688999999999988876543
No 460
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=26.71 E-value=80 Score=26.85 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=23.6
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|.++|+. ..||+++ .+++.|.++|++|.++...
T Consensus 12 k~vlITG------asggiG~---~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 12 ACAAVTG------AGSGIGL---EICRAFAASGARLILIDRE 44 (254)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCcHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 4555553 3477655 6889999999999888654
No 461
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=26.67 E-value=62 Score=27.63 Aligned_cols=26 Identities=19% Similarity=0.346 Sum_probs=21.1
Q ss_pred CChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 95 PGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 95 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.|+++ ..+++++.++|++|+++....
T Consensus 28 SG~mG---~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHLG---KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHHH---HHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCCc
Confidence 46664 468999999999999998764
No 462
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=26.58 E-value=55 Score=24.59 Aligned_cols=35 Identities=9% Similarity=0.173 Sum_probs=23.3
Q ss_pred CCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCc--EEEEEeC
Q 044542 77 FEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGH--EIHVFTA 121 (465)
Q Consensus 77 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~--~V~v~~~ 121 (465)
.+++||+++... ......+.+.|.+.|+ +|..+..
T Consensus 5 ~~~~~ILivdd~----------~~~~~~l~~~L~~~g~~~~v~~~~~ 41 (143)
T 2qvg_A 5 ADKVDILYLEDD----------EVDIQSVERVFHKISSLIKIEIAKS 41 (143)
T ss_dssp --CCSEEEECCC----------HHHHHHHHHHHHHHCTTCCEEEESS
T ss_pred cCCCeEEEEeCC----------HHHHHHHHHHHHHhCCCceEEEECC
Confidence 356799999765 3456677788888887 6665543
No 463
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=26.53 E-value=27 Score=30.93 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=24.1
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|+|+++.. .|+.++ .+++.|.+.||+|.+++...
T Consensus 2 ~~~vlVtGa-------tG~iG~---~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGP-------TGAIGR---HIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEEST-------TSTTHH---HHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECC-------CchHHH---HHHHHHHhCCCcEEEEECCC
Confidence 357777643 355544 56788888899999987654
No 464
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=26.50 E-value=1.8e+02 Score=20.92 Aligned_cols=75 Identities=12% Similarity=0.081 Sum_probs=47.5
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHHc-----CCeEEecCCCCcce---eeeeeCCceEEeCC-CHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMHC-----GRTVLTPNYPSIVR---TVVVNEELGYTFSP-NVKSFVEA 417 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma~-----G~PvI~s~~gg~~~---e~v~~~~~G~l~~~-d~~~la~~ 417 (465)
++....+.. .|++++-..-++.-|..+++.+.. ..|+|.....+..+ +.+..|..+++..| +.+++.++
T Consensus 41 ~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 120 (129)
T 1p6q_A 41 EQGMKIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQGDRALVQKAAALGANNVLAKPFTIEKMKAA 120 (129)
T ss_dssp HHHHHHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSCCCHHHHHHHHHHTCSCEECCCSSHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHHHHHHH
Confidence 555555543 578776432234456777887753 56777543222211 23345778999999 99999999
Q ss_pred HHHHHh
Q 044542 418 LELVIR 423 (465)
Q Consensus 418 i~~ll~ 423 (465)
+.+++.
T Consensus 121 i~~~~~ 126 (129)
T 1p6q_A 121 IEAVFG 126 (129)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988765
No 465
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=26.46 E-value=67 Score=27.47 Aligned_cols=25 Identities=16% Similarity=0.150 Sum_probs=19.6
Q ss_pred CChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 95 PGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 95 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.||+++ .+++.|.++|++|.++...
T Consensus 22 sggiG~---~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 22 AQNIGL---ACVTALAEAGARVIIADLD 46 (260)
T ss_dssp TSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CchHHH---HHHHHHHHCCCEEEEEeCC
Confidence 477654 6888999999999888654
No 466
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=26.42 E-value=74 Score=26.02 Aligned_cols=32 Identities=6% Similarity=0.217 Sum_probs=23.3
Q ss_pred hcccCEEEEeChhHHHHHHHHhCCCCCCEEEe
Q 044542 226 FSSYNQHICISNSAAEVLVKIYQLPQRNVHVI 257 (465)
Q Consensus 226 ~~~~d~ii~~S~~~~~~~~~~~~~~~~ki~vi 257 (465)
+..+|.|++..+...+.+.+.++....|+..+
T Consensus 108 ~~~~DlIltMd~~~~~~l~~~~P~~~~Kv~lL 139 (184)
T 4etn_A 108 MESADLVLAMTHQHKQIIASQFGRYRDKVFTL 139 (184)
T ss_dssp HHHCSEEEESSHHHHHHHHHHCGGGGGGEEEH
T ss_pred cCCCCEEEEcCcHHHHHHHHHCCCccceEEEh
Confidence 45789999999988888887665334566554
No 467
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=26.37 E-value=38 Score=29.65 Aligned_cols=35 Identities=11% Similarity=0.182 Sum_probs=24.9
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC-CcEEEEEeCCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAAR-GHEIHVFTAPSD 124 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~ 124 (465)
|||+++. ..|+.++ .+++.|.+. |++|.+++....
T Consensus 1 M~ilVtG-------atG~iG~---~l~~~L~~~~g~~V~~~~R~~~ 36 (289)
T 3e48_A 1 MNIMLTG-------ATGHLGT---HITNQAIANHIDHFHIGVRNVE 36 (289)
T ss_dssp CCEEEET-------TTSHHHH---HHHHHHHHTTCTTEEEEESSGG
T ss_pred CEEEEEc-------CCchHHH---HHHHHHhhCCCCcEEEEECCHH
Confidence 6888764 3366665 455668887 999999987653
No 468
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=26.36 E-value=1.4e+02 Score=27.10 Aligned_cols=66 Identities=15% Similarity=0.116 Sum_probs=39.8
Q ss_pred CCeEEEEEeCCcchhHHHHhcCCeEEcCCCChhHHHHHHH--hcCeEEecccCCCCCcHHHHHHHHcCCeEEecC
Q 044542 317 PGVYLLVAGTGPWGRRYAELGQNVKVLGALEAHQLSEFYN--ALDVFVNPTLRPQGLDLTLIEAMHCGRTVLTPN 389 (465)
Q Consensus 317 ~~~~l~ivG~g~~~~~~~~l~~~V~~~g~v~~~~~~~~~~--~aDv~v~ps~~~eg~~~~~~EAma~G~PvI~s~ 389 (465)
++++++-+-+..... ..+....+... .++.+++. ..|+++..+.. ..-.-.+.+|+..|++|++=+
T Consensus 29 ~~~~l~av~d~~~~~-~~~~~~~~~~~-----~~~~~ll~~~~vD~V~i~tp~-~~H~~~~~~al~aGkhVl~EK 96 (358)
T 3gdo_A 29 DEYQISKIMTSRTEE-VKRDFPDAEVV-----HELEEITNDPAIELVIVTTPS-GLHYEHTMACIQAGKHVVMEK 96 (358)
T ss_dssp TTEEEEEEECSCHHH-HHHHCTTSEEE-----SSTHHHHTCTTCCEEEECSCT-TTHHHHHHHHHHTTCEEEEES
T ss_pred CCeEEEEEEcCCHHH-HHhhCCCCceE-----CCHHHHhcCCCCCEEEEcCCc-HHHHHHHHHHHHcCCeEEEec
Confidence 678877655433322 32222233332 34556676 68999886643 333446678999999999844
No 469
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=26.17 E-value=1.8e+02 Score=23.19 Aligned_cols=49 Identities=18% Similarity=0.121 Sum_probs=33.7
Q ss_pred CCCCCceeEEEEeCC--CCC---CCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 74 GPTFEKLKLAVFSKT--WPI---GAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 74 ~~~~~~mkIl~v~~~--~p~---~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.|..++..+++|.+. |.. ....-|.+.=+..|.+.|.+.|++|.+...-
T Consensus 27 ~m~~~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dl 80 (167)
T 1pyo_A 27 RLQSRPRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYDVHVLCDQ 80 (167)
T ss_dssp CCCCSSSEEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTTEEEEEEESC
T ss_pred cCCCCCceEEEEEeCcccCCCCCCccCCCcHHHHHHHHHHHHHCCCEEEEeeCC
Confidence 444444566555432 321 1346788999999999999999999987654
No 470
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=26.03 E-value=63 Score=27.36 Aligned_cols=34 Identities=26% Similarity=0.451 Sum_probs=25.1
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
||+++|+. ..||+++ .+++.|.++|++|.+....
T Consensus 3 ~k~vlVTG------as~GIG~---a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 3 LGHIIVTG------AGSGLGR---ALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp CCEEEEES------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEECC
Confidence 46667764 3477755 6889999999998887654
No 471
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=25.97 E-value=66 Score=27.77 Aligned_cols=33 Identities=24% Similarity=0.391 Sum_probs=23.9
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|+++|+. ..||+++ .+++.|.++|++|.++...
T Consensus 8 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTG------AAQGIGR---AFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCCcHHH---HHHHHHHHCCCEEEEEECC
Confidence 5566664 3477755 6788999999999887654
No 472
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=25.91 E-value=1.8e+02 Score=20.74 Aligned_cols=76 Identities=12% Similarity=0.096 Sum_probs=45.9
Q ss_pred hHHHHHHH--hcCeEEecccCCCCCcHHHHHHHH---cCCeEEe-cCCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542 349 HQLSEFYN--ALDVFVNPTLRPQGLDLTLIEAMH---CGRTVLT-PNYPSIV--RTVVVNEELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 349 ~~~~~~~~--~aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~-s~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~ 419 (465)
++....+. ..|++++-..-++.-|..+++.+. ...|+|. |...... .+....|..+++..| +.+++.+++.
T Consensus 37 ~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~ 116 (124)
T 1srr_A 37 LQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVK 116 (124)
T ss_dssp HHHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCCCEEESSCCHHHHHHHHH
T ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccCchHHHHHHHhcChHhhccCCCCHHHHHHHHH
Confidence 44444443 368877633222334566666664 4678775 3332211 123345678999999 9999999998
Q ss_pred HHHhC
Q 044542 420 LVIRD 424 (465)
Q Consensus 420 ~ll~~ 424 (465)
+++..
T Consensus 117 ~~~~~ 121 (124)
T 1srr_A 117 KYLPL 121 (124)
T ss_dssp HHSCC
T ss_pred HHhcc
Confidence 87654
No 473
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=25.82 E-value=82 Score=27.53 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=25.6
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
.|+++|+. ..||+++ .+++.|.++|++|.++...
T Consensus 29 ~k~~lVTG------as~GIG~---aia~~la~~G~~V~~~~~~ 62 (280)
T 4da9_A 29 RPVAIVTG------GRRGIGL---GIARALAASGFDIAITGIG 62 (280)
T ss_dssp CCEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEec------CCCHHHH---HHHHHHHHCCCeEEEEeCC
Confidence 46777774 3477755 6889999999999888753
No 474
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=25.61 E-value=1.2e+02 Score=22.70 Aligned_cols=29 Identities=21% Similarity=0.288 Sum_probs=24.2
Q ss_pred CCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 94 APGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 94 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
..|..+..+..+++.+.+.|++|.++...
T Consensus 9 ~tGnT~~~a~~i~~~l~~~g~~v~~~~~~ 37 (137)
T 2fz5_A 9 GTGNTEAMANEIEAAVKAAGADVESVRFE 37 (137)
T ss_dssp SSSHHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CCChHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 45778888999999999999999988654
No 475
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=25.60 E-value=1.8e+02 Score=20.57 Aligned_cols=75 Identities=16% Similarity=0.219 Sum_probs=45.6
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH---cCCeEEec-CCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH---CGRTVLTP-NYPSIV--RTVVVNEELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~s-~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~ 419 (465)
++....+.. .|++++--.-++.-|..+++.+. ...|+|.. ..+... .+.+..|..+++..| +.+++...+.
T Consensus 34 ~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~ 113 (121)
T 2pl1_A 34 KEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQ 113 (121)
T ss_dssp HHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCCCHHHHHHHHHcCccceEECCCCHHHHHHHHH
Confidence 444444443 57777632223445667777765 34677643 332211 123445778999999 9999999998
Q ss_pred HHHh
Q 044542 420 LVIR 423 (465)
Q Consensus 420 ~ll~ 423 (465)
+++.
T Consensus 114 ~~~~ 117 (121)
T 2pl1_A 114 ALMR 117 (121)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
No 476
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=25.57 E-value=90 Score=26.59 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=24.2
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|+++|+. ..||+++ .+++.|.++|++|.++....
T Consensus 8 k~vlVTG------as~giG~---~ia~~l~~~G~~V~~~~r~~ 41 (250)
T 2fwm_X 8 KNVWVTG------AGKGIGY---ATALAFVEAGAKVTGFDQAF 41 (250)
T ss_dssp CEEEEES------TTSHHHH---HHHHHHHHTTCEEEEEESCC
T ss_pred CEEEEeC------CCcHHHH---HHHHHHHHCCCEEEEEeCch
Confidence 4555553 3477755 67899999999999887553
No 477
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=25.50 E-value=30 Score=31.57 Aligned_cols=45 Identities=9% Similarity=0.022 Sum_probs=30.1
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
.+|||+++....- ....=.-.....++++|.+.||+|+.+.....
T Consensus 2 ~~~~v~vl~GG~s--~e~~vSl~sa~~v~~al~~~g~~v~~i~~~~~ 46 (346)
T 3se7_A 2 SHMKIGIIFGGVS--EEHDISVKSAREVATHLGTGVFEPFYLGITKS 46 (346)
T ss_dssp CCEEEEEEEECSS--TTHHHHHHHHHHHHHHSCTTTEEEEEEEECTT
T ss_pred CCCEEEEEeeecC--CCccHHHHHHHHHHHHhcccCCEEEEEEECCC
Confidence 3789999986431 11111113566888999999999999887643
No 478
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=25.49 E-value=74 Score=28.55 Aligned_cols=36 Identities=19% Similarity=0.366 Sum_probs=25.1
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCC-------cEEEEEeCCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARG-------HEIHVFTAPS 123 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G-------~~V~v~~~~~ 123 (465)
..|+|++.. ..|+++. .+++.|.+.| ++|.++....
T Consensus 13 ~~~~vlVtG-------a~G~iG~---~l~~~L~~~g~~~~r~~~~V~~~~r~~ 55 (342)
T 2hrz_A 13 QGMHIAIIG-------AAGMVGR---KLTQRLVKDGSLGGKPVEKFTLIDVFQ 55 (342)
T ss_dssp SCEEEEEET-------TTSHHHH---HHHHHHHHHCEETTEEEEEEEEEESSC
T ss_pred cCCEEEEEC-------CCcHHHH---HHHHHHHhcCCcccCCCceEEEEEccC
Confidence 456777663 3366654 6778888889 8888887654
No 479
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=25.48 E-value=86 Score=26.81 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=23.5
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|+++|+. ..||+++ .+++.|.++|++|.++...
T Consensus 8 k~vlITG------asggiG~---~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 8 ALALVTG------AGSGIGR---AVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEC------CCChHHH---HHHHHHHHCCCEEEEEeCC
Confidence 4555553 3477654 6889999999999888654
No 480
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=25.45 E-value=86 Score=27.93 Aligned_cols=33 Identities=21% Similarity=0.257 Sum_probs=24.0
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
+|||+++.. |+++. .++..|. .|++|+++....
T Consensus 2 ~mkI~IiGa--------Ga~G~---~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGG--------GSVGL---LCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECC--------SHHHH---HHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECC--------CHHHH---HHHHHHh-cCCceEEEECCH
Confidence 479999853 55544 4667777 899999987654
No 481
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=25.42 E-value=70 Score=24.14 Aligned_cols=68 Identities=16% Similarity=0.139 Sum_probs=40.6
Q ss_pred hcCeEEecccCCCCCcHHHHHHHHc---CCeEEecCCCCcce---eeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 357 ALDVFVNPTLRPQGLDLTLIEAMHC---GRTVLTPNYPSIVR---TVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 357 ~aDv~v~ps~~~eg~~~~~~EAma~---G~PvI~s~~gg~~~---e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
..|++++-..-++.-|..+++.+.. ..|||........+ +.+..|..+++..| +.++|..+|.+++..
T Consensus 67 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~~ 141 (146)
T 4dad_A 67 AFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPLEPRALDDALKRAAAQ 141 (146)
T ss_dssp TCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTTTEEEEEESSCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCCCHHHHHHHHHHHHhh
Confidence 4577666332223334555555433 56776532222111 23345667899999 999999999998875
No 482
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=25.36 E-value=3.3e+02 Score=23.55 Aligned_cols=100 Identities=11% Similarity=0.162 Sum_probs=47.8
Q ss_pred EEEEeeccccccCHHHHHHHHHHhhhcCCCeEE----------------EEEeCCc-chhHHHHhcCCeEEcCCCChhHH
Q 044542 289 VMGVAGRLVRDKGHPLLYEAFSSITRDHPGVYL----------------LVAGTGP-WGRRYAELGQNVKVLGALEAHQL 351 (465)
Q Consensus 289 ~l~~~Grl~~~Kg~~~ll~a~~~l~~~~~~~~l----------------~ivG~g~-~~~~~~~l~~~V~~~g~v~~~~~ 351 (465)
-++.+|.+ ...-++.+++.+++.... +.+++ ++.|+|. .-+...+.+..+.++|.+.+.+.
T Consensus 135 g~G~ig~l-~~~t~~el~~~vk~~l~~-~~vr~~~~~~g~~~~~I~rVAv~~GsG~~~~~~a~~~gaD~~ITGd~~~h~~ 212 (267)
T 2fyw_A 135 GIGRIGNI-QPQTFWELAQQVKQVFDL-DSLRMVHYQEDDLQKPISRVAICGGSGQSFYKDALAKGADVYITGDIYYHTA 212 (267)
T ss_dssp EEEEEEEE-EEEEHHHHHHHHHHHTTC-SCCEEECSCTTGGGSEEEEEEEESSSCGGGHHHHHHTTCSEEEESCCCHHHH
T ss_pred CeEEEEEe-ccCCHHHHHHHHHHHcCC-CeEEEEeccCCCCCCceeEEEEEcCCCHHHHHHHHHcCCCEEEEccCcHHHH
Confidence 36677888 666677777766654321 11111 1122222 11122223466777777766665
Q ss_pred HHHHHhcCeEEecccCCCCCcH-HHHHHHHc-------CCeEEecCC
Q 044542 352 SEFYNALDVFVNPTLRPQGLDL-TLIEAMHC-------GRTVLTPNY 390 (465)
Q Consensus 352 ~~~~~~aDv~v~ps~~~eg~~~-~~~EAma~-------G~PvI~s~~ 390 (465)
......-=.++...++.|-+++ .+.|.+.- |++|+.++.
T Consensus 213 ~~A~e~gi~~i~~GH~tE~~~~~~l~~~L~~~~~~~~~~v~v~~~~~ 259 (267)
T 2fyw_A 213 QDMLSDGLLALDPGHYIEVIFVEKIAALLSQWKEDKGWSIDILPSQA 259 (267)
T ss_dssp HHHHHTTCEEEECCGGGGGHHHHHHHHHHHHHHHHHTCCCEEEECCC
T ss_pred HHHHHCCCeEEECCcHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEec
Confidence 5554433233444433454443 22222211 666666654
No 483
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=25.32 E-value=82 Score=26.94 Aligned_cols=26 Identities=23% Similarity=0.339 Sum_probs=20.2
Q ss_pred CChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 95 PGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 95 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
.||+++ .+++.|.++|++|.++....
T Consensus 23 sggiG~---~~a~~l~~~G~~V~~~~r~~ 48 (265)
T 1h5q_A 23 NRGIGL---AFTRAVAAAGANVAVIYRSA 48 (265)
T ss_dssp TSHHHH---HHHHHHHHTTEEEEEEESSC
T ss_pred CchHHH---HHHHHHHHCCCeEEEEeCcc
Confidence 477654 68899999999998887543
No 484
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=25.25 E-value=3.1e+02 Score=23.17 Aligned_cols=67 Identities=10% Similarity=0.124 Sum_probs=41.3
Q ss_pred cCeEEecccCCCCCcHHHHHHHH---cCCeEEecCCCCcc---eeeeeeCCceEEeCC-CHHHHHHHHHHHHhC
Q 044542 358 LDVFVNPTLRPQGLDLTLIEAMH---CGRTVLTPNYPSIV---RTVVVNEELGYTFSP-NVKSFVEALELVIRD 424 (465)
Q Consensus 358 aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~s~~gg~~---~e~v~~~~~G~l~~~-d~~~la~~i~~ll~~ 424 (465)
.|++++--.-++.-|..+++.+. ..+|||+....... ...+..|..+++..| +.++|.++|.+++..
T Consensus 174 ~dlvl~D~~mp~~~G~~l~~~ir~~~~~~piI~lt~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~~~~ 247 (254)
T 2ayx_A 174 IDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTLYAER 247 (254)
T ss_dssp CSEEEEEESSCSSCCHHHHHHHHHHHCCSCEEEEESSTTSHHHHHHHHCCCEEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHhcCCCCcEEEEECCCCHHHHHHHHHcCCceEEECCCCHHHHHHHHHHHHHH
Confidence 56766532222334556666553 46788753222211 123445778899999 999999999988764
No 485
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=25.21 E-value=91 Score=26.68 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=24.3
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|+++|+. ..||+++ .+++.|.+.|++|.++....
T Consensus 7 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~~ 40 (256)
T 2d1y_A 7 KGVLVTG------GARGIGR---AIAQAFAREGALVALCDLRP 40 (256)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESST
T ss_pred CEEEEeC------CCCHHHH---HHHHHHHHCCCEEEEEeCCh
Confidence 4555653 3477755 68889999999998886554
No 486
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=25.19 E-value=2.8e+02 Score=22.58 Aligned_cols=75 Identities=16% Similarity=0.160 Sum_probs=47.1
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH---cCCeEEecCCCCcc---eeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH---CGRTVLTPNYPSIV---RTVVVNEELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~s~~gg~~---~e~v~~~~~G~l~~~-d~~~la~~i~ 419 (465)
++....+.. .|++++--.-++.-|..+++.+. ..+|+|........ .+.+..|..|++..| ++++|..+|.
T Consensus 36 ~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~ 115 (225)
T 1kgs_A 36 EEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVR 115 (225)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSCHHHHHHHTCCCCCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHhCCccEEEeCCCCHHHHHHHHH
Confidence 444444433 57877643223445677777764 36788753322211 133456778999999 9999999999
Q ss_pred HHHh
Q 044542 420 LVIR 423 (465)
Q Consensus 420 ~ll~ 423 (465)
.++.
T Consensus 116 ~~~~ 119 (225)
T 1kgs_A 116 ALIR 119 (225)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8875
No 487
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=25.15 E-value=55 Score=29.64 Aligned_cols=33 Identities=15% Similarity=0.388 Sum_probs=24.6
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
+|||+++.. |.++ ..++..|.+.||+|+++...
T Consensus 14 ~~kI~iIG~--------G~mG---~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGA--------GSWG---TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECc--------CHHH---HHHHHHHHhCCCeEEEEeCC
Confidence 579999853 4433 35778888999999988754
No 488
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=25.15 E-value=1.1e+02 Score=24.91 Aligned_cols=39 Identities=15% Similarity=0.207 Sum_probs=27.1
Q ss_pred ceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCCC
Q 044542 79 KLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPSD 124 (465)
Q Consensus 79 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 124 (465)
+|||+++... ... ..-+....+.|.+.|++|.+++....
T Consensus 23 ~~kV~ill~~-----g~~--~~e~~~~~~~l~~ag~~v~~vs~~~~ 61 (193)
T 1oi4_A 23 SKKIAVLITD-----EFE--DSEFTSPADEFRKAGHEVITIEKQAG 61 (193)
T ss_dssp CCEEEEECCT-----TBC--THHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCEEEEEECC-----CCC--HHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 4689998752 112 22345677788889999999998753
No 489
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=25.15 E-value=1.1e+02 Score=25.26 Aligned_cols=38 Identities=24% Similarity=0.195 Sum_probs=28.3
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|.|++.+.. ..-|-...+.+|+.+|+++| +|.++-.+.
T Consensus 1 kvI~v~s~K-----GGvGKTT~a~~LA~~la~~g-~VlliD~D~ 38 (209)
T 3cwq_A 1 MIITVASFK-----GGVGKTTTAVHLSAYLALQG-ETLLIDGDP 38 (209)
T ss_dssp CEEEEEESS-----TTSSHHHHHHHHHHHHHTTS-CEEEEEECT
T ss_pred CEEEEEcCC-----CCCcHHHHHHHHHHHHHhcC-CEEEEECCC
Confidence 356666543 33466678899999999999 998887664
No 490
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=25.15 E-value=89 Score=26.60 Aligned_cols=34 Identities=26% Similarity=0.436 Sum_probs=24.3
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|+++|+. ..||+++ .+++.|.++|++|.++....
T Consensus 8 k~vlVTG------as~gIG~---~ia~~l~~~G~~V~~~~r~~ 41 (249)
T 2ew8_A 8 KLAVITG------GANGIGR---AIAERFAVEGADIAIADLVP 41 (249)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeC------CCcHHHH---HHHHHHHHCCCEEEEEcCCc
Confidence 4556653 3477655 68899999999998886543
No 491
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=25.14 E-value=62 Score=29.05 Aligned_cols=34 Identities=15% Similarity=0.246 Sum_probs=24.9
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|+++|+. ..||++. .+++.|.++|++|.+.....
T Consensus 9 k~vlVTG------as~gIG~---~la~~l~~~G~~Vv~~~r~~ 42 (319)
T 3ioy_A 9 RTAFVTG------GANGVGI---GLVRQLLNQGCKVAIADIRQ 42 (319)
T ss_dssp CEEEEET------TTSTHHH---HHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEcC------CchHHHH---HHHHHHHHCCCEEEEEECCH
Confidence 5666664 3477755 68899999999988876543
No 492
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=25.13 E-value=1.2e+02 Score=25.98 Aligned_cols=33 Identities=15% Similarity=0.198 Sum_probs=23.8
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|+++|+. ..||+++ .+++.|.++|++|.++...
T Consensus 10 k~vlVTG------as~giG~---~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 10 CTALVTG------GSRGIGY---GIVEELASLGASVYTCSRN 42 (260)
T ss_dssp CEEEEES------CSSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCcHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 4555654 3477755 6788999999999887654
No 493
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=25.12 E-value=1.4e+02 Score=26.30 Aligned_cols=40 Identities=13% Similarity=0.218 Sum_probs=30.8
Q ss_pred CceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCC-cEEEEEeCC
Q 044542 78 EKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARG-HEIHVFTAP 122 (465)
Q Consensus 78 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~ 122 (465)
++.|||+++... . .........|.+.|.+.| ++|++....
T Consensus 3 ~~~kvLiv~G~~----~-H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLITGQN----N-HNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEESCC----S-SCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEcCCC----C-CChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 467999998642 2 226777888999999998 999998754
No 494
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=25.11 E-value=48 Score=26.21 Aligned_cols=70 Identities=16% Similarity=0.102 Sum_probs=37.8
Q ss_pred HHHHHhcCeEEecccCCCCCcHHHHH---HHHcCCeEEecCCCCcce--e-ee---eeCCceEEeCC-CHHHHHHHHHHH
Q 044542 352 SEFYNALDVFVNPTLRPQGLDLTLIE---AMHCGRTVLTPNYPSIVR--T-VV---VNEELGYTFSP-NVKSFVEALELV 421 (465)
Q Consensus 352 ~~~~~~aDv~v~ps~~~eg~~~~~~E---Ama~G~PvI~s~~gg~~~--e-~v---~~~~~G~l~~~-d~~~la~~i~~l 421 (465)
.+.+..||++|.-- . +.-+-+..| |.+.|+||++--.+.... . ++ .++..-.+.+. + +++.+.|.++
T Consensus 63 ~~~i~~aD~vvA~l-~-~~d~Gt~~EiG~A~algkPV~~l~~~~~~~~ls~mi~G~~~~~~~~~~~Y~~-~el~~il~~f 139 (152)
T 4fyk_A 63 LNWLQQADVVVAEV-T-QPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAE-GEVETMLDRY 139 (152)
T ss_dssp HHHHHHCSEEEEEC-S-SCCHHHHHHHHHHHHTTCCEEEEECGGGSCCCCHHHHHHCCSSSEEEEECCT-TCHHHHHHHH
T ss_pred HHHHHHCCEEEEeC-C-CCCCCHHHHHHHHHHcCCeEEEEEeCCccchhHHHHcCCCCCCeEEEEEecH-HHHHHHHHHH
Confidence 46789999999832 2 222334444 789999999832211110 1 11 11112222333 5 7787888877
Q ss_pred HhC
Q 044542 422 IRD 424 (465)
Q Consensus 422 l~~ 424 (465)
++.
T Consensus 140 ~~~ 142 (152)
T 4fyk_A 140 FEA 142 (152)
T ss_dssp HC-
T ss_pred HHh
Confidence 765
No 495
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=24.92 E-value=45 Score=28.03 Aligned_cols=95 Identities=11% Similarity=0.041 Sum_probs=49.3
Q ss_pred eeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhC--CcEEEEEeCCCCCCCCCc-ccCCcceEEEeec-CCC--------c
Q 044542 80 LKLAVFSKTWPIGAAPGGMERHASTLYHALAAR--GHEIHVFTAPSDRKPHND-VHQGNLHVHFAAN-DHG--------S 147 (465)
Q Consensus 80 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~-~~~~~~~v~~~~~-~~~--------~ 147 (465)
|||+++... +| ..+..+.+++.+. +++|..+.+........+ ....+..+..... ... .
T Consensus 1 ~ri~vl~Sg-------~g--snl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~ 71 (212)
T 1jkx_A 1 MNIVVLISG-------NG--SNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDREL 71 (212)
T ss_dssp CEEEEEESS-------CC--HHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSSHHHHHHHH
T ss_pred CEEEEEEEC-------Cc--HHHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCcccccchhhccHHH
Confidence 588888753 23 2467788887765 578766665543322211 1223333333221 111 1
Q ss_pred cccCCCCCCcEEEecCCc--hhHHhhhcCCcEEEEecc
Q 044542 148 VNLNNDGAFDYVHTESVS--LPHWRAKMVPNVAVTWHG 183 (465)
Q Consensus 148 ~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~ 183 (465)
....+..+||+|++-.+. ++..+-...+.-++.+|.
T Consensus 72 ~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 109 (212)
T 1jkx_A 72 IHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHP 109 (212)
T ss_dssp HHHHGGGCCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred HHHHHhcCCCEEEEeChhhhCCHHHHhhccCCEEEEcc
Confidence 112267899999987762 222222222324777885
No 496
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=24.80 E-value=94 Score=26.57 Aligned_cols=34 Identities=18% Similarity=0.313 Sum_probs=24.1
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAPS 123 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 123 (465)
|+++|+. ..||+++ .+++.|.++|++|.++....
T Consensus 13 k~vlVTG------asggiG~---~~a~~l~~~G~~V~~~~r~~ 46 (265)
T 2o23_A 13 LVAVITG------GASGLGL---ATAERLVGQGASAVLLDLPN 46 (265)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEEC------CCChHHH---HHHHHHHHCCCEEEEEeCCc
Confidence 4555553 3467654 68899999999998887654
No 497
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=24.79 E-value=97 Score=25.45 Aligned_cols=42 Identities=21% Similarity=0.225 Sum_probs=26.6
Q ss_pred CCCceeEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 76 TFEKLKLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 76 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
...+|+|++++..-. ...-....+.++.+.|+++|+. +++..
T Consensus 10 ~~~~~~I~Vfg~s~~---~~~~~~~~A~~lg~~la~~g~~--lv~GG 51 (189)
T 3sbx_A 10 EPGRWTVAVYCAAAP---THPELLELAGAVGAAIAARGWT--LVWGG 51 (189)
T ss_dssp ---CCEEEEECCSSC---CCHHHHHHHHHHHHHHHHTTCE--EEECC
T ss_pred CCCCeEEEEEEeCCC---CChHHHHHHHHHHHHHHHCCCE--EEECC
Confidence 344589999986421 1123345688999999999985 45544
No 498
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=24.76 E-value=57 Score=27.81 Aligned_cols=26 Identities=12% Similarity=0.186 Sum_probs=20.1
Q ss_pred CCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 94 APGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 94 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
..||++. .+++.|.++|++|.++...
T Consensus 15 asggiG~---~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 15 SSQGIGL---ATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp CSSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CCChHHH---HHHHHHHHCCCEEEEECCC
Confidence 3477655 6888999999999888765
No 499
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=24.76 E-value=69 Score=27.51 Aligned_cols=33 Identities=21% Similarity=0.202 Sum_probs=24.6
Q ss_pred eEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCCcEEEEEeCC
Q 044542 81 KLAVFSKTWPIGAAPGGMERHASTLYHALAARGHEIHVFTAP 122 (465)
Q Consensus 81 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 122 (465)
|+++|+. ..||+++ .+++.|.++|++|.+....
T Consensus 9 k~~lVTG------as~gIG~---a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 9 KKAIVIG------GTHGMGL---ATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp CEEEEET------CSSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 6667764 3477755 6889999999999887654
No 500
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=24.75 E-value=2e+02 Score=20.89 Aligned_cols=76 Identities=14% Similarity=0.188 Sum_probs=46.0
Q ss_pred hHHHHHHHh--cCeEEecccCCCCCcHHHHHHHH---cCCeEEe-cCCCCcc--eeeeeeCCceEEeCC-CHHHHHHHHH
Q 044542 349 HQLSEFYNA--LDVFVNPTLRPQGLDLTLIEAMH---CGRTVLT-PNYPSIV--RTVVVNEELGYTFSP-NVKSFVEALE 419 (465)
Q Consensus 349 ~~~~~~~~~--aDv~v~ps~~~eg~~~~~~EAma---~G~PvI~-s~~gg~~--~e~v~~~~~G~l~~~-d~~~la~~i~ 419 (465)
++....+.. .|++++-..-++.-|..+++.+. .+.|+|. |...... .+.+..|..+++..| +.++|.++|.
T Consensus 37 ~~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~ 116 (132)
T 3crn_A 37 GEGLAKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYASLENSVFSLNAGADAYIMKPVNPRDLLEKIK 116 (132)
T ss_dssp HHHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccccHHHHHHHHhccchhhccCCCCHHHHHHHHH
Confidence 444444433 57777633222334566666653 3577774 3332211 123445778999999 9999999999
Q ss_pred HHHhC
Q 044542 420 LVIRD 424 (465)
Q Consensus 420 ~ll~~ 424 (465)
+++..
T Consensus 117 ~~~~~ 121 (132)
T 3crn_A 117 EKLDE 121 (132)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88764
Done!