Query 044543
Match_columns 962
No_of_seqs 559 out of 3707
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 04:18:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044543.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044543hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0205 Plasma membrane H+-tra 100.0 5E-193 1E-197 1581.9 48.5 935 17-962 8-942 (942)
2 KOG0202 Ca2+ transporting ATPa 100.0 5E-138 1E-142 1182.0 58.7 824 26-858 3-970 (972)
3 TIGR01647 ATPase-IIIA_H plasma 100.0 9E-131 2E-135 1206.0 86.6 752 45-816 1-754 (755)
4 TIGR01523 ATPase-IID_K-Na pota 100.0 2E-129 4E-134 1222.0 90.2 819 24-858 4-1049(1053)
5 COG0474 MgtA Cation transport 100.0 3E-130 6E-135 1218.7 80.8 806 23-840 19-898 (917)
6 PRK10517 magnesium-transportin 100.0 8E-129 2E-133 1201.4 91.0 805 26-855 48-896 (902)
7 PRK15122 magnesium-transportin 100.0 2E-128 3E-133 1201.1 91.1 815 26-857 26-898 (903)
8 TIGR01524 ATPase-IIIB_Mg magne 100.0 1E-127 2E-132 1192.5 91.8 808 25-857 13-863 (867)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1E-124 3E-129 1181.8 91.8 832 23-857 13-986 (997)
10 TIGR01522 ATPase-IIA2_Ca golgi 100.0 6E-123 1E-127 1157.1 91.5 800 26-857 3-883 (884)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 7E-123 2E-127 1163.0 90.9 816 31-853 43-938 (941)
12 KOG0204 Calcium transporting A 100.0 2E-123 5E-128 1059.8 52.2 816 31-853 102-1005(1034)
13 TIGR01116 ATPase-IIA1_Ca sarco 100.0 9E-115 2E-119 1085.5 85.5 779 74-855 1-917 (917)
14 TIGR01657 P-ATPase-V P-type AT 100.0 4E-111 8E-116 1066.2 76.6 752 43-809 137-1021(1054)
15 KOG0203 Na+/K+ ATPase, alpha s 100.0 5E-115 1E-119 990.2 32.3 845 12-858 23-1009(1019)
16 TIGR01652 ATPase-Plipid phosph 100.0 2E-104 4E-109 1008.6 72.9 787 58-864 1-1053(1057)
17 PLN03190 aminophospholipid tra 100.0 6E-102 1E-106 974.9 74.3 785 56-868 85-1152(1178)
18 PRK14010 potassium-transportin 100.0 1.8E-94 4E-99 857.2 58.8 545 76-678 28-588 (673)
19 KOG0206 P-type ATPase [General 100.0 4.8E-97 1E-101 898.3 29.4 786 54-861 28-1081(1151)
20 PRK01122 potassium-transportin 100.0 1.7E-91 3.6E-96 832.7 63.0 537 75-667 28-581 (679)
21 KOG0208 Cation transport ATPas 100.0 2.1E-89 4.5E-94 791.7 54.7 679 33-725 148-986 (1140)
22 TIGR01497 kdpB K+-transporting 100.0 4.1E-87 8.9E-92 793.1 61.3 543 75-672 27-587 (675)
23 COG2217 ZntA Cation transport 100.0 2.4E-84 5.2E-89 770.6 58.2 504 106-673 174-679 (713)
24 KOG0210 P-type ATPase [Inorgan 100.0 2.9E-81 6.2E-86 696.3 42.8 762 53-861 74-1045(1051)
25 PRK11033 zntA zinc/cadmium/mer 100.0 2E-79 4.3E-84 749.9 60.9 499 105-671 205-706 (741)
26 KOG0207 Cation transport ATPas 100.0 4.8E-80 1E-84 715.8 41.6 538 106-698 341-890 (951)
27 TIGR01494 ATPase_P-type ATPase 100.0 1E-77 2.3E-82 711.5 55.6 475 113-675 3-483 (499)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 4.2E-75 9.2E-80 695.8 60.0 516 85-671 4-525 (556)
29 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.9E-75 4.2E-80 694.5 55.4 498 85-671 4-504 (536)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 8.9E-75 1.9E-79 691.0 58.8 506 105-687 53-560 (562)
31 PRK10671 copA copper exporting 100.0 1.2E-73 2.5E-78 712.4 61.3 520 107-689 287-809 (834)
32 KOG0209 P-type ATPase [Inorgan 100.0 2.1E-72 4.5E-77 636.3 50.6 569 30-619 148-832 (1160)
33 COG2216 KdpB High-affinity K+ 100.0 3.3E-62 7.1E-67 532.3 34.9 521 77-653 29-569 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 3.3E-35 7.1E-40 314.1 25.0 221 111-332 1-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 4.7E-26 1E-30 239.9 12.0 211 336-613 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.6 5.1E-15 1.1E-19 136.1 11.0 123 491-644 20-145 (152)
37 KOG4383 Uncharacterized conser 99.4 7.7E-10 1.7E-14 125.5 33.8 209 489-697 814-1129(1354)
38 PF00690 Cation_ATPase_N: Cati 99.3 4.3E-12 9.2E-17 108.7 7.4 67 27-93 1-69 (69)
39 PF00689 Cation_ATPase_C: Cati 99.2 6.4E-10 1.4E-14 114.4 15.4 166 681-853 1-182 (182)
40 smart00831 Cation_ATPase_N Cat 99.0 8E-10 1.7E-14 93.2 6.6 60 38-97 2-63 (64)
41 TIGR02137 HSK-PSP phosphoserin 98.9 9.9E-09 2.2E-13 107.3 11.4 131 501-648 68-198 (203)
42 PRK11133 serB phosphoserine ph 98.8 8.3E-09 1.8E-13 115.1 9.9 132 501-646 181-316 (322)
43 TIGR00338 serB phosphoserine p 98.8 1.7E-08 3.7E-13 107.0 10.0 129 501-644 85-218 (219)
44 PRK01158 phosphoglycolate phos 98.8 3.8E-08 8.2E-13 105.1 11.9 153 494-646 12-226 (230)
45 TIGR01487 SPP-like sucrose-pho 98.8 2.5E-08 5.3E-13 105.6 9.6 144 501-644 18-214 (215)
46 PF13246 Hydrolase_like2: Puta 98.7 1.5E-08 3.2E-13 91.7 6.1 65 383-448 20-90 (91)
47 PRK10513 sugar phosphate phosp 98.7 7.5E-08 1.6E-12 105.5 11.9 66 581-646 196-265 (270)
48 COG0561 Cof Predicted hydrolas 98.7 9.8E-08 2.1E-12 104.3 11.6 154 494-647 12-259 (264)
49 TIGR02726 phenyl_P_delta pheny 98.7 8.3E-08 1.8E-12 97.1 9.4 100 508-637 41-142 (169)
50 TIGR01482 SPP-subfamily Sucros 98.6 2.3E-07 5E-12 98.7 11.8 146 501-646 15-222 (225)
51 TIGR01670 YrbI-phosphatas 3-de 98.6 1.1E-07 2.3E-12 95.2 8.5 97 509-637 36-136 (154)
52 PRK15126 thiamin pyrimidine py 98.6 1.2E-07 2.6E-12 104.1 9.5 66 581-646 188-259 (272)
53 COG0560 SerB Phosphoserine pho 98.6 2.4E-07 5.2E-12 97.4 9.8 119 500-633 76-199 (212)
54 PRK10976 putative hydrolase; P 98.5 2.6E-07 5.7E-12 101.0 9.7 66 581-646 190-261 (266)
55 PF08282 Hydrolase_3: haloacid 98.5 4.5E-07 9.7E-12 97.4 8.8 146 500-645 14-254 (254)
56 PRK13582 thrH phosphoserine ph 98.4 1.1E-06 2.3E-11 92.1 11.1 127 501-645 68-195 (205)
57 PLN02887 hydrolase family prot 98.4 6.8E-07 1.5E-11 106.7 10.2 52 595-646 525-576 (580)
58 PRK09484 3-deoxy-D-manno-octul 98.4 6.4E-07 1.4E-11 92.3 8.0 96 508-635 55-154 (183)
59 PRK10530 pyridoxal phosphate ( 98.4 1.6E-06 3.4E-11 95.1 11.6 66 581-646 199-268 (272)
60 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.3 1E-06 2.3E-11 91.7 8.2 117 501-630 80-200 (201)
61 PRK08238 hypothetical protein; 98.3 0.00013 2.8E-09 85.9 25.9 101 501-626 72-172 (479)
62 TIGR01486 HAD-SF-IIB-MPGP mann 98.3 3.7E-06 8E-11 91.5 12.3 66 581-646 176-253 (256)
63 TIGR03333 salvage_mtnX 2-hydro 98.3 5.7E-06 1.2E-10 87.5 11.3 135 500-646 69-209 (214)
64 PF12710 HAD: haloacid dehalog 98.2 1.1E-06 2.5E-11 90.7 5.7 92 504-610 92-192 (192)
65 TIGR00099 Cof-subfamily Cof su 98.2 1.5E-06 3.2E-11 94.5 6.6 64 581-644 188-255 (256)
66 PRK03669 mannosyl-3-phosphogly 98.2 9.7E-06 2.1E-10 89.0 12.5 66 581-646 187-265 (271)
67 KOG1615 Phosphoserine phosphat 98.2 5E-06 1.1E-10 82.8 7.6 108 502-619 89-199 (227)
68 PLN02954 phosphoserine phospha 98.1 1.3E-05 2.8E-10 85.2 11.2 130 502-643 85-221 (224)
69 PRK00192 mannosyl-3-phosphogly 98.1 1.9E-05 4.1E-10 86.8 12.5 66 581-646 190-267 (273)
70 COG1778 Low specificity phosph 98.1 8.2E-06 1.8E-10 78.8 7.7 111 508-650 42-160 (170)
71 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 1.6E-05 3.4E-10 81.9 8.8 113 501-617 72-186 (188)
72 PRK09552 mtnX 2-hydroxy-3-keto 97.9 3.9E-05 8.4E-10 81.5 9.8 132 501-645 74-212 (219)
73 TIGR01488 HAD-SF-IB Haloacid D 97.9 1.8E-05 3.8E-10 80.7 6.6 100 502-612 74-177 (177)
74 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.8 4.2E-05 9.1E-10 79.9 7.9 108 500-619 86-197 (202)
75 PRK13222 phosphoglycolate phos 97.8 8E-05 1.7E-09 79.1 10.0 125 500-647 92-223 (226)
76 TIGR02471 sucr_syn_bact_C sucr 97.8 0.00012 2.7E-09 78.5 11.4 66 581-646 159-232 (236)
77 cd01427 HAD_like Haloacid deha 97.7 8.2E-05 1.8E-09 71.3 7.3 118 497-617 20-138 (139)
78 COG0546 Gph Predicted phosphat 97.6 0.00021 4.5E-09 76.0 9.6 126 499-645 87-217 (220)
79 TIGR01454 AHBA_synth_RP 3-amin 97.6 0.00026 5.6E-09 74.2 9.2 124 501-645 75-203 (205)
80 TIGR02461 osmo_MPG_phos mannos 97.5 0.00036 7.9E-09 74.3 9.4 43 499-541 13-55 (225)
81 TIGR01485 SPP_plant-cyano sucr 97.5 0.00033 7.2E-09 75.9 8.9 147 500-646 20-244 (249)
82 PRK13223 phosphoglycolate phos 97.3 0.00068 1.5E-08 74.5 9.1 125 500-645 100-229 (272)
83 TIGR02463 MPGP_rel mannosyl-3- 97.3 0.0018 3.8E-08 68.7 11.4 38 504-541 19-56 (221)
84 PRK13288 pyrophosphatase PpaX; 97.3 0.00088 1.9E-08 70.7 8.7 123 502-645 83-210 (214)
85 PLN02382 probable sucrose-phos 97.2 0.0017 3.6E-08 75.5 11.2 142 505-646 32-257 (413)
86 TIGR01449 PGP_bact 2-phosphogl 97.2 0.00093 2E-08 70.2 8.1 122 501-643 85-211 (213)
87 PRK10187 trehalose-6-phosphate 97.2 0.0023 4.9E-08 70.1 10.9 139 501-645 36-240 (266)
88 PRK10826 2-deoxyglucose-6-phos 97.0 0.0021 4.5E-08 68.3 8.3 118 501-642 92-216 (222)
89 PRK13226 phosphoglycolate phos 97.0 0.0022 4.9E-08 68.5 8.4 124 501-645 95-224 (229)
90 PRK13225 phosphoglycolate phos 97.0 0.005 1.1E-07 67.6 11.0 121 501-645 142-267 (273)
91 TIGR01422 phosphonatase phosph 96.9 0.0037 8E-08 67.8 9.9 100 501-618 99-200 (253)
92 TIGR03351 PhnX-like phosphonat 96.9 0.0041 9E-08 65.8 9.3 124 500-643 86-217 (220)
93 TIGR01544 HAD-SF-IE haloacid d 96.9 0.0088 1.9E-07 65.1 11.7 133 500-646 120-274 (277)
94 PRK12702 mannosyl-3-phosphogly 96.8 0.011 2.3E-07 64.5 11.5 43 500-542 17-59 (302)
95 PRK11590 hypothetical protein; 96.7 0.0061 1.3E-07 64.3 9.2 108 501-621 95-204 (211)
96 PRK13478 phosphonoacetaldehyde 96.7 0.01 2.2E-07 65.0 10.6 93 501-614 101-197 (267)
97 PRK14502 bifunctional mannosyl 96.6 0.0099 2.2E-07 71.6 11.0 48 494-541 425-473 (694)
98 TIGR01548 HAD-SF-IA-hyp1 haloa 96.6 0.0028 6E-08 66.0 5.5 94 499-612 104-197 (197)
99 PLN03243 haloacid dehalogenase 96.5 0.01 2.3E-07 64.6 9.0 120 501-641 109-230 (260)
100 TIGR01484 HAD-SF-IIB HAD-super 96.4 0.01 2.2E-07 62.0 8.5 39 501-539 17-55 (204)
101 TIGR01545 YfhB_g-proteo haloac 96.4 0.0095 2.1E-07 62.8 8.1 107 501-620 94-202 (210)
102 PRK06698 bifunctional 5'-methy 96.4 0.008 1.7E-07 71.2 8.0 123 501-647 330-455 (459)
103 PLN02770 haloacid dehalogenase 96.3 0.015 3.3E-07 62.9 9.5 116 501-635 108-227 (248)
104 COG4030 Uncharacterized protei 96.3 0.024 5.3E-07 58.2 9.5 144 502-646 84-262 (315)
105 PRK11587 putative phosphatase; 96.2 0.016 3.4E-07 61.4 8.6 114 501-634 83-198 (218)
106 PRK06769 hypothetical protein; 96.2 0.015 3.2E-07 59.4 7.7 123 502-644 29-170 (173)
107 TIGR01672 AphA HAD superfamily 96.1 0.0081 1.8E-07 64.3 5.7 91 502-618 115-210 (237)
108 PRK11009 aphA acid phosphatase 96.1 0.0097 2.1E-07 63.7 6.0 92 501-618 114-210 (237)
109 PRK14501 putative bifunctional 96.0 0.034 7.3E-07 69.8 11.2 171 457-646 481-721 (726)
110 TIGR02253 CTE7 HAD superfamily 95.9 0.016 3.4E-07 61.3 6.7 98 501-619 94-195 (221)
111 PHA02530 pseT polynucleotide k 95.8 0.021 4.6E-07 63.6 7.6 108 497-615 183-291 (300)
112 PLN02779 haloacid dehalogenase 95.8 0.023 4.9E-07 63.0 7.5 116 501-633 144-262 (286)
113 PLN02575 haloacid dehalogenase 95.7 0.033 7.1E-07 63.6 8.4 120 501-641 216-337 (381)
114 PRK08942 D,D-heptose 1,7-bisph 95.7 0.046 9.9E-07 56.1 8.8 128 501-646 29-177 (181)
115 TIGR01428 HAD_type_II 2-haloal 95.4 0.037 8E-07 57.5 7.4 94 501-615 92-187 (198)
116 TIGR01990 bPGM beta-phosphoglu 95.4 0.024 5.3E-07 58.0 5.8 93 501-614 87-179 (185)
117 TIGR01662 HAD-SF-IIIA HAD-supe 95.3 0.052 1.1E-06 52.4 7.3 92 500-614 24-125 (132)
118 PF13419 HAD_2: Haloacid dehal 95.3 0.017 3.6E-07 57.9 3.9 96 501-615 77-172 (176)
119 PTZ00174 phosphomannomutase; P 95.2 0.019 4.1E-07 62.2 4.3 54 580-633 187-245 (247)
120 PF05116 S6PP: Sucrose-6F-phos 95.1 0.041 8.9E-07 59.5 6.7 45 580-624 164-212 (247)
121 PRK14988 GMP/IMP nucleotidase; 95.1 0.045 9.7E-07 58.3 6.8 99 501-620 93-195 (224)
122 TIGR02254 YjjG/YfnB HAD superf 95.0 0.049 1.1E-06 57.5 6.7 121 501-643 97-222 (224)
123 COG4359 Uncharacterized conser 94.9 0.045 9.7E-07 54.8 5.4 110 502-617 74-183 (220)
124 TIGR01509 HAD-SF-IA-v3 haloaci 94.7 0.08 1.7E-06 53.8 7.3 94 501-614 85-178 (183)
125 smart00775 LNS2 LNS2 domain. T 94.7 0.16 3.5E-06 50.9 9.1 102 499-614 25-140 (157)
126 PLN02940 riboflavin kinase 94.6 0.073 1.6E-06 61.5 7.3 114 501-633 93-210 (382)
127 TIGR02009 PGMB-YQAB-SF beta-ph 94.5 0.05 1.1E-06 55.6 5.2 92 501-615 88-181 (185)
128 TIGR01685 MDP-1 magnesium-depe 94.5 0.081 1.8E-06 53.9 6.5 104 499-618 43-155 (174)
129 PRK09449 dUMP phosphatase; Pro 94.2 0.11 2.4E-06 55.0 7.1 123 501-645 95-222 (224)
130 PLN02811 hydrolase 94.1 0.13 2.8E-06 54.5 7.3 116 501-633 78-200 (220)
131 TIGR00213 GmhB_yaeD D,D-heptos 93.9 0.17 3.7E-06 51.7 7.5 26 502-527 27-52 (176)
132 TIGR01656 Histidinol-ppas hist 93.4 0.13 2.8E-06 50.9 5.5 96 501-614 27-139 (147)
133 TIGR01549 HAD-SF-IA-v1 haloaci 93.4 0.089 1.9E-06 52.1 4.3 90 502-613 65-154 (154)
134 COG2179 Predicted hydrolase of 93.3 0.6 1.3E-05 46.5 9.6 110 459-614 19-132 (175)
135 TIGR01668 YqeG_hyp_ppase HAD s 93.2 0.2 4.3E-06 50.9 6.7 92 500-619 42-136 (170)
136 TIGR02252 DREG-2 REG-2-like, H 93.0 0.2 4.2E-06 52.2 6.4 94 501-614 105-199 (203)
137 TIGR01533 lipo_e_P4 5'-nucleot 92.5 0.5 1.1E-05 51.5 8.8 86 499-609 116-204 (266)
138 TIGR01261 hisB_Nterm histidino 92.3 0.19 4.2E-06 50.6 5.0 97 501-615 29-142 (161)
139 PF06888 Put_Phosphatase: Puta 92.3 0.35 7.7E-06 51.6 7.2 105 501-609 71-186 (234)
140 PRK05446 imidazole glycerol-ph 92.2 0.26 5.6E-06 55.9 6.4 96 500-615 29-143 (354)
141 TIGR00685 T6PP trehalose-phosp 92.2 0.17 3.6E-06 54.7 4.8 65 577-645 163-239 (244)
142 smart00577 CPDc catalytic doma 91.6 0.21 4.5E-06 49.5 4.2 94 500-618 44-140 (148)
143 TIGR01459 HAD-SF-IIA-hyp4 HAD- 91.4 0.82 1.8E-05 49.2 9.0 94 494-613 17-115 (242)
144 TIGR01681 HAD-SF-IIIC HAD-supe 90.8 0.58 1.2E-05 45.1 6.4 39 501-539 29-68 (128)
145 PRK10563 6-phosphogluconate ph 90.7 0.26 5.7E-06 52.0 4.2 96 501-617 88-183 (221)
146 TIGR01675 plant-AP plant acid 90.2 1.2 2.5E-05 47.4 8.5 87 500-606 119-209 (229)
147 PLN02919 haloacid dehalogenase 90.1 0.92 2E-05 59.2 9.2 114 502-635 162-281 (1057)
148 TIGR01691 enolase-ppase 2,3-di 89.9 0.59 1.3E-05 49.6 6.0 98 499-617 93-193 (220)
149 TIGR02247 HAD-1A3-hyp Epoxide 89.9 0.43 9.3E-06 50.0 5.1 103 500-621 93-198 (211)
150 TIGR01664 DNA-3'-Pase DNA 3'-p 88.7 1 2.2E-05 45.6 6.5 40 502-541 43-94 (166)
151 PLN02580 trehalose-phosphatase 87.9 0.63 1.4E-05 53.3 4.8 67 575-645 292-373 (384)
152 PF09419 PGP_phosphatase: Mito 87.6 1.8 3.9E-05 43.8 7.4 105 463-611 36-155 (168)
153 PRK09456 ?-D-glucose-1-phospha 87.2 1.5 3.3E-05 45.5 6.9 100 501-621 84-187 (199)
154 PLN02205 alpha,alpha-trehalose 86.8 2.4 5.3E-05 53.9 9.6 67 458-537 586-653 (854)
155 KOG3120 Predicted haloacid deh 86.6 3.1 6.7E-05 43.3 8.3 108 501-618 84-208 (256)
156 COG3769 Predicted hydrolase (H 86.3 4.6 0.0001 42.0 9.4 37 505-541 27-63 (274)
157 TIGR01517 ATPase-IIB_Ca plasma 86.1 1.2E+02 0.0027 39.5 46.7 200 107-314 133-358 (941)
158 PLN03017 trehalose-phosphatase 84.7 15 0.00032 42.0 13.4 61 581-645 283-355 (366)
159 PLN02645 phosphoglycolate phos 83.2 2.2 4.9E-05 47.8 6.3 47 494-540 37-86 (311)
160 TIGR01993 Pyr-5-nucltdase pyri 82.9 1.4 3.1E-05 44.9 4.3 97 501-615 84-180 (184)
161 PHA02597 30.2 hypothetical pro 82.4 2 4.3E-05 44.4 5.2 97 501-622 74-177 (197)
162 TIGR01686 FkbH FkbH-like domai 82.3 2.8 6E-05 47.2 6.6 91 501-619 31-129 (320)
163 PLN03190 aminophospholipid tra 82.0 50 0.0011 43.9 18.7 116 53-171 90-212 (1178)
164 PRK10725 fructose-1-P/6-phosph 79.0 3.5 7.6E-05 42.1 5.6 89 506-614 92-180 (188)
165 PF13344 Hydrolase_6: Haloacid 77.0 1.4 3E-05 40.7 1.7 48 494-541 7-57 (101)
166 cd04728 ThiG Thiazole synthase 69.4 74 0.0016 34.2 12.4 53 485-537 88-143 (248)
167 COG0474 MgtA Cation transport 68.7 1.5E+02 0.0032 38.6 17.6 269 27-314 42-330 (917)
168 TIGR01458 HAD-SF-IIA-hyp3 HAD- 68.5 7.5 0.00016 42.3 5.2 118 504-644 123-253 (257)
169 COG0241 HisB Histidinol phosph 67.9 9.1 0.0002 39.2 5.2 98 502-618 32-146 (181)
170 PF03767 Acid_phosphat_B: HAD 67.9 7.6 0.00017 41.5 5.0 89 501-608 115-207 (229)
171 PRK10444 UMP phosphatase; Prov 67.3 5.5 0.00012 43.1 3.8 45 494-538 10-54 (248)
172 COG0637 Predicted phosphatase/ 66.0 14 0.0003 39.2 6.4 98 500-616 85-182 (221)
173 TIGR01680 Veg_Stor_Prot vegeta 65.9 27 0.00059 38.1 8.6 88 499-606 143-235 (275)
174 TIGR01684 viral_ppase viral ph 65.6 9.7 0.00021 41.9 5.2 41 502-542 146-187 (301)
175 TIGR01458 HAD-SF-IIA-hyp3 HAD- 65.5 7.4 0.00016 42.3 4.4 48 494-541 10-64 (257)
176 PLN02423 phosphomannomutase 64.7 9 0.0002 41.3 4.8 43 580-623 188-235 (245)
177 PRK00208 thiG thiazole synthas 64.6 1.1E+02 0.0025 32.9 12.7 54 484-537 87-143 (250)
178 KOG3040 Predicted sugar phosph 64.4 13 0.00028 38.6 5.3 47 491-537 13-59 (262)
179 TIGR01457 HAD-SF-IIA-hyp2 HAD- 63.2 12 0.00027 40.4 5.5 48 494-541 10-60 (249)
180 PHA03398 viral phosphatase sup 62.9 11 0.00024 41.5 5.1 41 502-542 148-189 (303)
181 TIGR01647 ATPase-IIIA_H plasma 61.3 74 0.0016 40.4 12.7 193 113-315 59-261 (755)
182 TIGR01493 HAD-SF-IA-v2 Haloaci 61.0 12 0.00026 37.7 4.7 86 501-612 90-175 (175)
183 PRK10748 flavin mononucleotide 60.8 15 0.00033 39.2 5.7 90 501-617 113-205 (238)
184 TIGR01663 PNK-3'Pase polynucle 60.3 28 0.0006 42.0 8.2 40 502-541 198-249 (526)
185 PLN02177 glycerol-3-phosphate 60.2 27 0.00058 41.8 8.0 104 502-620 111-215 (497)
186 PF08235 LNS2: LNS2 (Lipin/Ned 59.6 43 0.00093 33.5 8.1 103 500-615 26-141 (157)
187 COG3700 AphA Acid phosphatase 54.8 19 0.00042 36.3 4.6 90 502-618 115-210 (237)
188 COG1011 Predicted hydrolase (H 54.5 36 0.00079 35.6 7.3 96 501-619 99-199 (229)
189 PF13380 CoA_binding_2: CoA bi 54.2 14 0.0003 35.0 3.5 79 458-540 18-103 (116)
190 TIGR02251 HIF-SF_euk Dullard-l 52.8 8.5 0.00018 38.7 2.0 42 499-541 40-81 (162)
191 TIGR01652 ATPase-Plipid phosph 51.4 3.8E+02 0.0082 35.6 17.2 63 680-742 871-939 (1057)
192 TIGR02244 HAD-IG-Ncltidse HAD 48.6 57 0.0012 37.1 7.8 106 503-614 186-317 (343)
193 TIGR01689 EcbF-BcbF capsule bi 48.0 19 0.00041 34.7 3.4 32 500-531 23-54 (126)
194 TIGR01657 P-ATPase-V P-type AT 47.4 5.6E+02 0.012 34.0 17.8 214 112-354 196-450 (1054)
195 PRK14194 bifunctional 5,10-met 46.7 48 0.0011 36.9 6.7 138 498-635 12-209 (301)
196 PTZ00174 phosphomannomutase; P 46.5 26 0.00056 37.7 4.6 41 494-534 14-55 (247)
197 PF05975 EcsB: Bacterial ABC t 45.7 5.3E+02 0.012 29.8 18.5 22 652-673 13-34 (386)
198 PTZ00445 p36-lilke protein; Pr 45.3 43 0.00092 35.2 5.6 64 453-529 28-103 (219)
199 TIGR01524 ATPase-IIIB_Mg magne 45.0 5.1E+02 0.011 33.5 16.6 196 111-312 97-316 (867)
200 PF10777 YlaC: Inner membrane 43.2 55 0.0012 32.1 5.6 49 793-848 33-81 (155)
201 PF03120 DNA_ligase_OB: NAD-de 42.1 14 0.0003 32.7 1.3 22 156-177 45-67 (82)
202 TIGR01106 ATPase-IIC_X-K sodiu 41.5 4.3E+02 0.0094 34.8 15.4 35 150-185 161-195 (997)
203 PF05822 UMPH-1: Pyrimidine 5' 41.1 90 0.002 33.7 7.5 130 501-646 90-242 (246)
204 TIGR01452 PGP_euk phosphoglyco 40.2 28 0.0006 38.3 3.7 48 494-541 11-61 (279)
205 PF06738 DUF1212: Protein of u 40.0 1.2E+02 0.0027 31.1 8.4 51 20-75 57-108 (193)
206 TIGR01522 ATPase-IIA2_Ca golgi 39.7 5.1E+02 0.011 33.6 15.5 198 112-314 90-306 (884)
207 PRK11507 ribosome-associated p 39.3 33 0.00072 29.4 3.1 26 146-171 38-63 (70)
208 COG0647 NagD Predicted sugar p 37.9 35 0.00077 37.3 4.0 46 493-538 16-61 (269)
209 TIGR01494 ATPase_P-type ATPase 37.0 2E+02 0.0044 34.4 10.7 147 149-314 53-212 (499)
210 TIGR01456 CECR5 HAD-superfamil 36.7 1.3E+02 0.0029 33.7 8.6 49 493-541 8-64 (321)
211 PRK09140 2-dehydro-3-deoxy-6-p 35.4 2E+02 0.0043 30.2 9.0 146 454-621 22-181 (206)
212 PF00122 E1-E2_ATPase: E1-E2 A 35.3 93 0.002 32.8 6.7 61 115-184 2-62 (230)
213 PF06570 DUF1129: Protein of u 34.4 5.6E+02 0.012 26.7 13.9 9 794-802 142-150 (206)
214 PF13275 S4_2: S4 domain; PDB: 33.9 23 0.00049 29.9 1.3 24 146-169 34-57 (65)
215 PF00389 2-Hacid_dh: D-isomer 33.3 3.3E+02 0.0072 25.9 9.7 45 574-619 43-89 (133)
216 PF13242 Hydrolase_like: HAD-h 32.6 33 0.00071 29.4 2.2 49 585-633 13-69 (75)
217 PF14336 DUF4392: Domain of un 32.4 81 0.0018 35.0 5.8 37 504-540 63-100 (291)
218 PLN02591 tryptophan synthase 32.3 2.1E+02 0.0044 31.1 8.7 43 579-621 174-220 (250)
219 COG5547 Small integral membran 32.1 2.1E+02 0.0045 23.5 6.2 48 74-129 3-52 (62)
220 TIGR00262 trpA tryptophan synt 31.9 1.8E+02 0.0038 31.7 8.2 39 500-538 123-163 (256)
221 KOG0210 P-type ATPase [Inorgan 31.6 2.5E+02 0.0054 34.6 9.6 102 68-172 96-205 (1051)
222 PF12368 DUF3650: Protein of u 31.5 38 0.00082 23.5 1.8 15 43-57 13-27 (28)
223 TIGR01116 ATPase-IIA1_Ca sarco 30.7 1.3E+03 0.029 30.0 21.1 163 149-314 92-271 (917)
224 CHL00200 trpA tryptophan synth 30.6 2.1E+02 0.0046 31.3 8.5 30 579-608 187-216 (263)
225 PF12710 HAD: haloacid dehalog 30.4 26 0.00056 35.6 1.4 14 339-352 1-14 (192)
226 TIGR01459 HAD-SF-IIA-hyp4 HAD- 29.4 45 0.00099 35.7 3.1 91 503-615 140-236 (242)
227 PRK09479 glpX fructose 1,6-bis 29.1 1.4E+02 0.0031 33.1 6.7 104 496-610 161-282 (319)
228 PRK10517 magnesium-transportin 28.9 1.4E+03 0.031 29.7 17.4 88 109-201 122-211 (902)
229 PF12689 Acid_PPase: Acid Phos 28.8 93 0.002 31.6 5.0 40 502-541 46-86 (169)
230 TIGR02854 spore_II_GA sigma-E 28.5 3.7E+02 0.008 29.8 10.1 25 832-856 127-151 (288)
231 PRK14179 bifunctional 5,10-met 28.1 1.5E+02 0.0032 32.9 6.7 138 498-635 10-208 (284)
232 PF03419 Peptidase_U4: Sporula 27.8 5.1E+02 0.011 28.7 11.2 28 832-859 126-153 (293)
233 PF15584 Imm44: Immunity prote 27.6 29 0.00062 31.1 0.9 19 163-181 13-31 (94)
234 PF06506 PrpR_N: Propionate ca 27.6 2.1E+02 0.0045 29.0 7.4 67 573-657 105-172 (176)
235 cd01573 modD_like ModD; Quinol 27.5 2.8E+02 0.006 30.5 8.8 57 574-633 209-270 (272)
236 PRK15122 magnesium-transportin 26.3 1.6E+03 0.034 29.4 27.3 196 111-314 119-351 (903)
237 COG0279 GmhA Phosphoheptose is 26.1 1.7E+02 0.0037 29.6 6.1 57 449-529 92-148 (176)
238 PRK14188 bifunctional 5,10-met 26.1 1.9E+02 0.0042 32.2 7.3 45 498-542 10-64 (296)
239 PRK14174 bifunctional 5,10-met 26.0 2E+02 0.0044 31.9 7.4 45 498-542 9-63 (295)
240 PRK05585 yajC preprotein trans 25.6 4.3E+02 0.0093 24.6 8.4 44 106-149 18-61 (106)
241 PLN02151 trehalose-phosphatase 25.2 83 0.0018 35.9 4.3 61 581-645 269-341 (354)
242 TIGR02250 FCP1_euk FCP1-like p 24.8 98 0.0021 30.9 4.3 41 500-541 57-97 (156)
243 COG2179 Predicted hydrolase of 24.7 1.2E+02 0.0027 30.6 4.8 82 454-541 49-133 (175)
244 PF01455 HupF_HypC: HupF/HypC 24.5 1.9E+02 0.0041 24.7 5.3 33 142-174 16-51 (68)
245 TIGR00612 ispG_gcpE 1-hydroxy- 24.1 1.6E+02 0.0035 33.1 6.0 150 451-622 148-319 (346)
246 PRK05742 nicotinate-nucleotide 23.8 2.7E+02 0.0058 30.7 7.8 171 428-633 80-274 (277)
247 PRK14175 bifunctional 5,10-met 22.8 1.4E+02 0.0031 33.0 5.4 45 498-542 11-64 (286)
248 PRK15424 propionate catabolism 22.7 7.7E+02 0.017 30.0 12.1 70 505-604 95-165 (538)
249 cd01516 FBPase_glpX Bacterial 22.7 2.3E+02 0.005 31.4 6.8 38 496-535 158-195 (309)
250 COG1188 Ribosome-associated he 22.5 99 0.0022 28.4 3.4 30 145-175 34-63 (100)
251 PF10011 DUF2254: Predicted me 22.4 1.2E+03 0.026 26.7 14.6 26 792-817 88-113 (371)
252 PRK14170 bifunctional 5,10-met 22.0 1.6E+02 0.0034 32.6 5.6 45 498-542 10-63 (284)
253 cd05017 SIS_PGI_PMI_1 The memb 21.6 1.3E+02 0.0029 28.2 4.4 37 502-540 55-91 (119)
254 PRK11840 bifunctional sulfur c 21.3 4.8E+02 0.01 29.4 9.1 54 484-537 161-217 (326)
255 PRK14169 bifunctional 5,10-met 21.3 1.7E+02 0.0037 32.3 5.6 45 498-542 9-62 (282)
256 cd02067 B12-binding B12 bindin 20.9 1.1E+02 0.0023 28.7 3.6 78 462-540 22-103 (119)
257 TIGR00676 fadh2 5,10-methylene 20.8 2E+02 0.0044 31.5 6.2 42 488-529 57-99 (272)
258 PF02699 YajC: Preprotein tran 20.7 1.2E+02 0.0026 26.8 3.6 13 160-172 36-48 (82)
259 KOG3085 Predicted hydrolase (H 20.7 2.7E+02 0.0058 29.9 6.8 105 504-628 116-222 (237)
260 cd02071 MM_CoA_mut_B12_BD meth 20.5 1.1E+02 0.0024 29.0 3.6 79 462-541 22-104 (122)
261 PRK12415 fructose 1,6-bisphosp 20.3 2.7E+02 0.0058 31.2 6.8 106 496-611 159-281 (322)
262 TIGR01460 HAD-SF-IIA Haloacid 20.2 1E+02 0.0022 32.9 3.7 34 494-527 7-40 (236)
263 cd00860 ThrRS_anticodon ThrRS 20.1 2E+02 0.0043 25.0 5.0 47 495-541 6-53 (91)
No 1
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-193 Score=1581.88 Aligned_cols=935 Identities=86% Similarity=1.320 Sum_probs=921.2
Q ss_pred hhhhhhcccccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccccchHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 044543 17 LEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEIAAIMAIAL 96 (962)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l 96 (962)
++++++|.+|++.+|.|||+++|+|+.+|||++|+++|+++||+|+++++|++.+++|+.+||+|++|+|+.+|++++.+
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~L 87 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGL 87 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeee
Q 044543 97 ANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIP 176 (962)
Q Consensus 97 ~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VP 176 (962)
.++++.+++|.|+++|+.++++|++++|+||++++++.++|++.++++++|+|||+|.++++++||||||+.|+.||+||
T Consensus 88 ang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiP 167 (942)
T KOG0205|consen 88 ANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIP 167 (942)
T ss_pred hcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEecCCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhccCCCChHHHHHHHH
Q 044543 177 ADARLLDGDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAI 256 (962)
Q Consensus 177 aD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l~~~~~~i 256 (962)
||++|++|+.++||+|+|||||.|++|++||.+|+||+|++|++.++|++||.+|++||.+++++++++.+|||+.++.|
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGI 247 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCc
Q 044543 257 GNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 336 (962)
Q Consensus 257 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v 336 (962)
+++|++++++++++.++++|+.+++.|+..+.+.+++++..||++||.++++++++|+++|+++|+++|+++++|+|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCC
Q 044543 337 DVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPV 416 (962)
Q Consensus 337 ~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~ 416 (962)
|++|+|||||||.|+++|.+..++.+.++.++++++..|+++++.+++|++|.|++++++||++++.+|++++++||||+
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV 407 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPV 407 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCcc
Confidence 99999999999999999999888889999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEe
Q 044543 417 EKRTAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLL 496 (962)
Q Consensus 417 ~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i 496 (962)
.||.+.+|.++||++++++||||++|+++|+.+.++++++++.+++|+++|+|.|++|++.++++..+..+..|+|+|+.
T Consensus 408 ~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gll 487 (942)
T KOG0205|consen 408 DKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLL 487 (942)
T ss_pred ccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe
Q 044543 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG 576 (962)
Q Consensus 497 ~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 576 (962)
.+.||||+|+.++|++....|++|+|+|||....++++++++|+.+|++++..+.|...++.+.+.++++++++++.||.
T Consensus 488 p~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred ccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHH
Q 044543 577 VFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMK 656 (962)
Q Consensus 577 vsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~ 656 (962)
+.|+||+++|+.||++||.|+|+|||+||+||||+||+|||+.+++|+||.+||+||++|+++.|+.++..+|.+|+||+
T Consensus 568 VfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmk 647 (942)
T KOG0205|consen 568 VFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (942)
T ss_pred cCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHhhhchhccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHH
Q 044543 657 NYTIYAVSITIRIVLGFLLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVM 736 (962)
Q Consensus 657 ~~i~~~~~~ni~~~l~~~~~~~~~~~~~~p~~il~i~l~~~~~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 736 (962)
+|.+|+++.++.++++++...+.|.|.|+|++++++.+++|++.|++++|+++|+|.|++|+++++|..++++|.|++++
T Consensus 648 nytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~~ 727 (942)
T KOG0205|consen 648 NYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAIM 727 (942)
T ss_pred hheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccccccccccCCChhHHHHHHHHHHHHHHHHHHhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHH
Q 044543 737 TVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLERPGLLLIAAFIIAQLVATLIAV 816 (962)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 816 (962)
+..+||..+.+.||+..||+.....+..+...+.|+++++.+++++|++|+++|+|.++|+++++.+++.++++++++++
T Consensus 728 tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliatliav 807 (942)
T KOG0205|consen 728 TVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIATLIAV 807 (942)
T ss_pred HHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888888999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhhhcccccccccCCchhhhhhHHHhhhhhc
Q 044543 817 YANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLH 896 (962)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (962)
|++|.+.+..++.|.|..++|+++++.+++.++.||..|+.+++++|+++++++++++.+++|++++|+.||+.+||++|
T Consensus 808 ya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a~~~~~qrt~~ 887 (942)
T KOG0205|consen 808 YANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREAQWALAQRTLH 887 (942)
T ss_pred HheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhhHHHHhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccccccccchhhhhHHHHHHHHHhHHHHHhhhhcccccchhhHHhcCCChhhhhhcccC
Q 044543 897 GLHPPETSELLNDKNNYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962 (962)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 962 (962)
|.+.+++ +++++++++++||+|++||||+|+++||++|++++||+|+|++ |||||
T Consensus 888 ~lq~~~~----------~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 888 GLQPPEG----------RELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred ccCCCcc----------chhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 9999851 7899999999999999999999999999999999999999999 89986
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-138 Score=1181.96 Aligned_cols=824 Identities=29% Similarity=0.419 Sum_probs=680.2
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCc-cccchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCC
Q 044543 26 DLERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKLEE-KKESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKP 103 (962)
Q Consensus 26 ~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~-~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~ 103 (962)
+.|..+.+|++..|.++ ++|||++|+.+|+++||+|+++. ...+.|+++++||.|++..+|+++|++|+++.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 45678999999999998 77999999999999999999985 45899999999999999999999999999997
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEe
Q 044543 104 PDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLD 183 (962)
Q Consensus 104 ~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~ 183 (962)
.|.+++.|.+++++|++++++||||++|++++|+++.++.++|+|+|+.+.+++++|||||||.++.||+||||.||++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeEecccccCCCeeeecCC--------------CCcccccceeecceEEEEEEEecchhHHHhHHHhhhccC-CCCh
Q 044543 184 GDPLKIDQSALTGESLPVTKMP--------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QEGH 248 (962)
Q Consensus 184 g~~~~Vdes~LTGEs~pv~K~~--------------g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~ 248 (962)
..++.||||.|||||.|+.|.. .|++|+||.|..|.+.|+|+.||.+|.+|++.+.++..+ .++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9889999999999999999954 257999999999999999999999999999999998875 6899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--Hhh---cc-c---cchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhc
Q 044543 249 FQKVLTAIGNFCICSIAIGMVIEIIV--MYP---IQ-H---RAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 319 (962)
Q Consensus 249 l~~~~~~i~~~~~~~i~~~~~~~~~~--~~~---~~-~---~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~ 319 (962)
+|+.++.++..+.-.+.++++..++. .|+ .. + ..+.+.|..++++.+++||++||.+++++++.|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999987653332222222222 221 11 2 334456777899999999999999999999999999999
Q ss_pred CCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecc-----------cCCC------------------hH-
Q 044543 320 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFV-----------KDMD------------------KD- 369 (962)
Q Consensus 320 ~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~-----------~~~~------------------~~- 369 (962)
++++||++.++|+||.+++||||||||||+|+|++.+.++.... .+++ .+
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 99999999999999999999999999999999999997753111 0011 11
Q ss_pred --HHHHHHHHhccc------c-----CCChHHHHHHHhhc-----Chh---h-----------hhcCceEeeecCCCCCC
Q 044543 370 --TVILYGARASRV------E-----NQDAIDACIVGMLG-----DAK---E-----------ARAGITELHFLPFNPVE 417 (962)
Q Consensus 370 --~~l~~a~~~~~~------~-----~~~~~~~al~~~~~-----~~~---~-----------~~~~~~~l~~~pF~s~~ 417 (962)
+++..++.|+.. . -+.|.|.|+...+. +.. . ....++....+||++++
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 233444444321 1 24788888876552 111 0 11123445889999999
Q ss_pred ceEEEEEEcCCCC--EEEEEeCcHHHHHHHhcc------------chHHHHHHHHHHHHHHhcCCeEEEEEeecCCC-C-
Q 044543 418 KRTAITYIDSDGS--WHRISKGAPEQIIELCNL------------REDVRNKAHTIIDKFADRGLRSLAVAEQSVPE-K- 481 (962)
Q Consensus 418 kr~sv~~~~~~g~--~~~~~KGa~e~il~~~~~------------~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~-~- 481 (962)
|+|++.+.++.|+ +..|.|||+|.|+++|+. ++..++.+.+...+++++|||+|++|+++.+. .
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999876664 789999999999999953 34668889999999999999999999998763 1
Q ss_pred ---------CCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--Ccccc
Q 044543 482 ---------TKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL 550 (962)
Q Consensus 482 ---------~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~--~~~~l 550 (962)
.+...|.+|+|+|++++.||||++++++|+.|+++||+|+|||||+.+||.+||+++|+..+.. ....+
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 2456789999999999999999999999999999999999999999999999999999976533 44667
Q ss_pred cccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc-CchHHHHhcc
Q 044543 551 LGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGAS 629 (962)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg-~gt~~a~~aa 629 (962)
+|.+.+ .++++++++...+..+|+|++|.||.+||+.||++|.+|+|||||+||+||||.|||||||| +|||+||+||
T Consensus 636 TG~efD-~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 636 TGSEFD-DLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred chhhhh-cCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 777665 78889999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhcCCchHHHHHHHHHHhhhc-hhccccCC
Q 044543 630 DIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF-LLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDR 707 (962)
Q Consensus 630 Divl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~-~~~~~~~~~~~~p~~il~i~l~~~~~-~~~l~~d~ 707 (962)
|+||.||||++|+.||++||.+|+||++|+.|.++.|+..+..+ +...|..++++.|+|+||+|+++|++ ++++|+++
T Consensus 715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep 794 (972)
T KOG0202|consen 715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEP 794 (972)
T ss_pred hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCC
Confidence 99999999999999999999999999999999999999776654 44567789999999999999999997 69999988
Q ss_pred CCCC---CCCCc----cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----ccc-cccc--------ccccCCChhHH
Q 044543 708 VKPS---PVPDT----WKLKEIFATGIVLGTYLAVMTVLFFWAIHSST-----FFS-EKFG--------VRSIRDSPHEL 766 (962)
Q Consensus 708 ~~~~---~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~~-~~~g--------~~~~~~~~~~~ 766 (962)
++++ ++|++ ...+.++..++.+|.|+.+.++..|++-+... +.. .+|. .+.-.-.....
T Consensus 795 ~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~ 874 (972)
T KOG0202|consen 795 VDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCP 874 (972)
T ss_pred CChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhccccc
Confidence 7654 22332 33455666667789999998886554433211 000 0000 00000000112
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCcccch---hHHHHHHHHHHHHHHHHHHHhhc--cccccccchhHHHHHHHHHHHH
Q 044543 767 TAAVYLQVSIVSQALIFVTRSRSWSFLERP---GLLLIAAFIIAQLVATLIAVYAN--FGFARIHGIGWGWVGVIWLYSI 841 (962)
Q Consensus 767 ~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 841 (962)
.|+.|..++++..++.++.++++.+.+..| |.|+++++.++.+...++ +|.+ ...+++.+++|.-|++++.+++
T Consensus 875 ~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~i-lYvp~l~~iFq~~~l~~~ew~~vl~~s~ 953 (972)
T KOG0202|consen 875 LTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLV-LYVPPLQRIFQTEPLSLAEWLLVLAISS 953 (972)
T ss_pred ceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheE-EEechhhhhheecCCcHHHHHHHHHHhh
Confidence 377788888999999999999886644332 448888888887655443 6654 2345677888877777789999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 044543 842 VFYIPLDVLKFIVRYAL 858 (962)
Q Consensus 842 ~~~~~~~~~K~~~r~~~ 858 (962)
..++++|++|++.|++.
T Consensus 954 ~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 954 PVIIVDEILKFIARNYF 970 (972)
T ss_pred hhhhHHHHHHHHHHhcc
Confidence 99999999999999875
No 3
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=8.7e-131 Score=1205.99 Aligned_cols=752 Identities=59% Similarity=0.946 Sum_probs=675.5
Q ss_pred CCCHHHHHHHHhhcCCCccCccccchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHH
Q 044543 45 GLSNEEGQKRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISF 124 (962)
Q Consensus 45 GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~ 124 (962)
|||++|+++|+++||+|+++.++++.|+.|+++|++|++|+++++++++++++ +|.+++.|++++++++.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999888888999999999999999999999999975 89999999999999999999
Q ss_pred HHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecC
Q 044543 125 IEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKM 204 (962)
Q Consensus 125 ~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~ 204 (962)
+||++++++.++|++..+++++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999977999999999999999999
Q ss_pred CCCcccccceeecceEEEEEEEecchhHHHhHHHhhhccC-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccch
Q 044543 205 PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAY 283 (962)
Q Consensus 205 ~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~ 283 (962)
+||.+|+||.+.+|+++++|++||.+|.+||+++++++++ +++++|+.+++++.+++.++++++++.+++++...+.++
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998875 677999999999988766555544444443433356778
Q ss_pred HhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecc
Q 044543 284 RNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFV 363 (962)
Q Consensus 284 ~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~ 363 (962)
..++..++++++++|||+||++++++++.|+++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+... ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999998763 22
Q ss_pred cCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEEEEEcCC-CCEEEEEeCcHHHH
Q 044543 364 KDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSD-GSWHRISKGAPEQI 442 (962)
Q Consensus 364 ~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~-g~~~~~~KGa~e~i 442 (962)
.+.++++++.+++.++....+||+|.|+++++.+....+..++.++.+||+|.+|+|++++.+++ |+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 23667788888887765566799999999988765545667888999999999999999987654 77888999999999
Q ss_pred HHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEE
Q 044543 443 IELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKM 522 (962)
Q Consensus 443 l~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~m 522 (962)
+++|++..+.++++++.+++++.+|+|++++||++ .|++|+|+|+++++||||+|++++|++||++||+|+|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998777777888899999999999999999973 2678999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCC
Q 044543 523 ITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDG 602 (962)
Q Consensus 523 iTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG 602 (962)
+|||++.||.++|+++||..+......+......+.++++++++.+++.++|||++|+||+++|+.||++|++|+|+|||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDG 543 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 543 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 99999999999999999976443333333333334677889999999999999999999999999999999999999999
Q ss_pred cCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 044543 603 VNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWKF 682 (962)
Q Consensus 603 ~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~~~~ 682 (962)
+||+|||++||||||||+|+|+||++||+||++|+|++|+.++++||++|+||++|+.|.++.|+..++.++...+++++
T Consensus 544 vNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~ 623 (755)
T TIGR01647 544 VNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF 623 (755)
T ss_pred cccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988777777777788
Q ss_pred CchHHHHHHHHHHhhhchhccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCCC
Q 044543 683 DFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGVRSIRDS 762 (962)
Q Consensus 683 ~~~p~~il~i~l~~~~~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 762 (962)
+++|+|++|+|+++|++.+++++|+++|+++|++|...+++..+++.|+++++.++++||+.+.+.++...++. ...
T Consensus 624 ~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 700 (755)
T TIGR01647 624 YFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGL---QLL 700 (755)
T ss_pred chhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccc---ccc
Confidence 89999999999999999999999999999999999999999999999999999999888776642222111111 113
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHH
Q 044543 763 PHELTAAVYLQVSIVSQALIFVTRSRSWSFLERPGLLLIAAFIIAQLVATLIAV 816 (962)
Q Consensus 763 ~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 816 (962)
..+.+|++|+.+++.+++++|+.|+++.+|.++|++++++++++.++++++++.
T Consensus 701 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~ 754 (755)
T TIGR01647 701 HGNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAV 754 (755)
T ss_pred HhhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhh
Confidence 456889999999999999999999999999999999999999999988877754
No 4
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.6e-129 Score=1222.01 Aligned_cols=819 Identities=26% Similarity=0.389 Sum_probs=673.7
Q ss_pred ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCC
Q 044543 24 NVDLERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGG 101 (962)
Q Consensus 24 ~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~ 101 (962)
--|+|..+.+|+++.|+++ .+|||++|+++|+++||+|+++.++ .++|+.|++||++|+.++++++++++++++
T Consensus 4 ~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~---- 79 (1053)
T TIGR01523 4 FNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH---- 79 (1053)
T ss_pred CCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh----
Confidence 3578999999999999998 5899999999999999999999765 688999999999999999999999999975
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEE
Q 044543 102 KPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARL 181 (962)
Q Consensus 102 ~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~l 181 (962)
+|.++++|++++++|++++++||+++++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||+|
T Consensus 80 ---~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL 156 (1053)
T TIGR01523 80 ---DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRL 156 (1053)
T ss_pred ---hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeeEecccccCCCeeeecCCC---------------CcccccceeecceEEEEEEEecchhHHHhHHHhhhccC--
Q 044543 182 LDGDPLKIDQSALTGESLPVTKMPG---------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-- 244 (962)
Q Consensus 182 l~g~~~~Vdes~LTGEs~pv~K~~g---------------~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-- 244 (962)
++++++.||||+|||||.|+.|.+. |++|+||.|.+|++.++|++||.+|++||+++++++..
T Consensus 157 i~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~ 236 (1053)
T TIGR01523 157 IETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL 236 (1053)
T ss_pred EEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhc
Confidence 9998899999999999999999742 57899999999999999999999999999999886432
Q ss_pred ----------------------------------CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHH
Q 044543 245 ----------------------------------QEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNL 290 (962)
Q Consensus 245 ----------------------------------~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (962)
.++|+|+.+++++.++..+.++++++.+++.+. ..+...+..+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---~~~~~~~~~a 313 (1053)
T TIGR01523 237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---DVDKEVAIYA 313 (1053)
T ss_pred cccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhHHHHHHH
Confidence 138999999999887554433322222221111 1124566778
Q ss_pred HHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeee---c-----
Q 044543 291 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEV---F----- 362 (962)
Q Consensus 291 l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~---~----- 362 (962)
++++++++|++||+++++++++|++||++++++||+++++|+||++++||+|||||||+|+|+|++.+... +
T Consensus 314 v~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~ 393 (1053)
T TIGR01523 314 ICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNS 393 (1053)
T ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999876421 0
Q ss_pred ccCC---------------------------------------C---------hHHHHHHHHHhccc------------c
Q 044543 363 VKDM---------------------------------------D---------KDTVILYGARASRV------------E 382 (962)
Q Consensus 363 ~~~~---------------------------------------~---------~~~~l~~a~~~~~~------------~ 382 (962)
..++ + ...++..++.|+.. .
T Consensus 394 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~ 473 (1053)
T TIGR01523 394 DDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKA 473 (1053)
T ss_pred CCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceee
Confidence 0000 0 01245555555421 1
Q ss_pred CCChHHHHHHHhhcChh----------hh-------------------hcCceEeeecCCCCCCceEEEEEEcCCC-CEE
Q 044543 383 NQDAIDACIVGMLGDAK----------EA-------------------RAGITELHFLPFNPVEKRTAITYIDSDG-SWH 432 (962)
Q Consensus 383 ~~~~~~~al~~~~~~~~----------~~-------------------~~~~~~l~~~pF~s~~kr~sv~~~~~~g-~~~ 432 (962)
.+||+|.|++.++.... +. +..|+.++.+||+|.+|||++++++++| +++
T Consensus 474 ~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~ 553 (1053)
T TIGR01523 474 HGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYN 553 (1053)
T ss_pred CcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEE
Confidence 25999999988763111 11 2347789999999999999999987655 478
Q ss_pred EEEeCcHHHHHHHhcc------------chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCC------------CCCCCC
Q 044543 433 RISKGAPEQIIELCNL------------REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKT------------KESPGG 488 (962)
Q Consensus 433 ~~~KGa~e~il~~~~~------------~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~------------~~~~e~ 488 (962)
+|+|||||.|+++|+. +++.++++.+.+++|+++|+|||++|||.+++++ ++..|+
T Consensus 554 ~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~ 633 (1053)
T TIGR01523 554 IYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAES 633 (1053)
T ss_pred EEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhcc
Confidence 9999999999999963 2345677888899999999999999999886532 234688
Q ss_pred CceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--------CcccccccchhccCC
Q 044543 489 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--------PSSALLGQIKDANIS 560 (962)
Q Consensus 489 ~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~--------~~~~l~~~~~~~~~~ 560 (962)
+|+|+|+++++||||+|++++|++|+++||+|+|+|||++.||.+||++|||.++.. ...+++|.+.+ .++
T Consensus 634 ~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~-~l~ 712 (1053)
T TIGR01523 634 DLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD-ALS 712 (1053)
T ss_pred CCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhh-hcC
Confidence 999999999999999999999999999999999999999999999999999974311 12456666554 577
Q ss_pred cchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc-CchHHHHhcccccccCCCch
Q 044543 561 ALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLS 639 (962)
Q Consensus 561 ~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg-~gt~~a~~aaDivl~~~~~~ 639 (962)
++++++++++..||||++|+||.++|+.+|++|++|+|||||+||+||||+|||||||| +|+|+|+++||++|++++|+
T Consensus 713 ~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~ 792 (1053)
T TIGR01523 713 DEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFA 792 (1053)
T ss_pred HHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHH
Confidence 78889999999999999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCchHHHHHHHHHHhhhc-hhccccCCCCCC-
Q 044543 640 VIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIW------KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS- 711 (962)
Q Consensus 640 ~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~~------~~~~~p~~il~i~l~~~~~-~~~l~~d~~~~~- 711 (962)
+|+.++.+||++|+|++|++.|.+++|+..++.+++..++. ++||+|+|++|+|+++|++ ++++++|++.+.
T Consensus 793 ~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~ 872 (1053)
T TIGR01523 793 SILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDL 872 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhH
Confidence 99999999999999999999999999998887776665542 3689999999999999975 699999876543
Q ss_pred ----CC--CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--------cccccccCCChhHHHHHHHHHHHHH
Q 044543 712 ----PV--PDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSE--------KFGVRSIRDSPHELTAAVYLQVSIV 777 (962)
Q Consensus 712 ----~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~~t~~~~~~~~~ 777 (962)
|+ .++...+.++..++++|+++++++++.|++.+.. +..+ .++.. . ....+.+|+.|.+++++
T Consensus 873 m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~-~-~~~~~a~t~~f~~l~~~ 949 (1053)
T TIGR01523 873 MDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG-FGSGNLGHDCDAHYHAG-C-NDVFKARSAAFATMTFC 949 (1053)
T ss_pred HhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccccccccccccc-c-cchhhhHHHHHHHHHHH
Confidence 12 1233345566667888999999888776654321 1000 01100 0 12456789999999999
Q ss_pred HHHHHhhhccCCCCccc------------------chhHHHHHHHHHHHHHHHHHHHhhc-c--ccccccchhHHHHHHH
Q 044543 778 SQALIFVTRSRSWSFLE------------------RPGLLLIAAFIIAQLVATLIAVYAN-F--GFARIHGIGWGWVGVI 836 (962)
Q Consensus 778 ~~~~~~~~r~~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~ 836 (962)
+.+++|++|+.+.+.+. ..|.+++++++++.++..++ +|.+ . .++.+.+++|.|++ +
T Consensus 950 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~-~~~p~~~~~~f~~~~l~~~w~~-~ 1027 (1053)
T TIGR01523 950 ALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPT-IYIPVINDDVFKHKPIGAEWGL-A 1027 (1053)
T ss_pred HHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHH-HhhhhhhhhhhccCCcchHHHH-H
Confidence 99999999997633221 13457777777766654333 4543 2 26677788886655 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc
Q 044543 837 WLYSIVFYIPLDVLKFIVRYAL 858 (962)
Q Consensus 837 ~~~~~~~~~~~~~~K~~~r~~~ 858 (962)
++++++.++..|++|++.|++.
T Consensus 1028 ~~~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1028 AAATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 7888888999999999877664
No 5
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-130 Score=1218.66 Aligned_cols=806 Identities=31% Similarity=0.489 Sum_probs=675.6
Q ss_pred cccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHHHHHHHHHHHc
Q 044543 23 ENVDLERIPIN--EVFEQLKCT-REGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEIAAIMAIALAN 98 (962)
Q Consensus 23 ~~~~~~~~~~~--~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~ 98 (962)
....+|..+.+ ++...+.++ .+||+++|+.+|+++||+|++++.+ .+.|..|+.+|++|+.++++++++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~- 97 (917)
T COG0474 19 TSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG- 97 (917)
T ss_pred CcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 34567777777 999999887 7799999999999999999999654 688999999999999999999999999986
Q ss_pred CCCCCCCh----hhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCe
Q 044543 99 GGGKPPDW----QDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDI 174 (962)
Q Consensus 99 ~~~~~~~~----~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~ 174 (962)
.| .++..|+.++++|++++++||+++++++++|++..+++++|+|||++++|++++|||||||.+++||+
T Consensus 98 ------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~ 171 (917)
T COG0474 98 ------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDV 171 (917)
T ss_pred ------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCc
Confidence 66 56678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecceEEEecCCeeEecccccCCCeeeecCC--------------CCcccccceeecceEEEEEEEecchhHHHhHHHhh
Q 044543 175 IPADARLLDGDPLKIDQSALTGESLPVTKMP--------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 240 (962)
Q Consensus 175 VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~--------------g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~ 240 (962)
||||++|+++++++||||+|||||.|+.|.+ .|++|+||.+++|++.++|++||.+|++||++.++
T Consensus 172 vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~ 251 (917)
T COG0474 172 VPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLL 251 (917)
T ss_pred cccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhh
Confidence 9999999999888999999999999999963 47899999999999999999999999999999999
Q ss_pred hcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhc
Q 044543 241 DST-NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 319 (962)
Q Consensus 241 ~~~-~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~ 319 (962)
... ...+++|+.+++++.+++.+.+++.++.+++.++..+..|...+..++++++++||++||+.++++++.|+.+|++
T Consensus 252 ~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 252 PTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 988 6899999999999988766655544444444433323448899999999999999999999999999999999999
Q ss_pred CCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCC---------hHHHHHHHHHhcccc--------
Q 044543 320 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMD---------KDTVILYGARASRVE-------- 382 (962)
Q Consensus 320 ~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~---------~~~~l~~a~~~~~~~-------- 382 (962)
+++++|+++++|+||++|+||||||||||+|+|+|+++++.....+.+ ...++..++.|+...
T Consensus 332 ~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~ 411 (917)
T COG0474 332 DNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQ 411 (917)
T ss_pred ccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCcee
Confidence 999999999999999999999999999999999999998752111222 112456666666322
Q ss_pred CCChHHHHHHHhhcC------hhhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhcc-------c
Q 044543 383 NQDAIDACIVGMLGD------AKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNL-------R 449 (962)
Q Consensus 383 ~~~~~~~al~~~~~~------~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-------~ 449 (962)
.+||+|.|++..+.+ .......+++++.+||+|+||||++++++.+|+++.++|||||.|+++|+. .
T Consensus 412 ~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 412 AGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 359999999998853 333455667799999999999999999977888999999999999999973 4
Q ss_pred hHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC----CCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcC
Q 044543 450 EDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK----ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITG 525 (962)
Q Consensus 450 ~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~----~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTG 525 (962)
++.++.+.+..++|+++|+|+|++|||..+..+. +..|++|+|+|+++|+||||+|+++||+.|++|||+||||||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 5677889999999999999999999998766544 578999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCC
Q 044543 526 DQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVND 605 (962)
Q Consensus 526 D~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND 605 (962)
||+.||++||++||+..+.....+++|.+.+ .++++++.+.+++.+||||+||+||+++|+.||++||+|+|||||+||
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~-~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvND 650 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELD-ALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVND 650 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhh-hcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchh
Confidence 9999999999999997664334466776655 667778999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCeeEEcc-CchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hc-C
Q 044543 606 APALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALI-WK-F 682 (962)
Q Consensus 606 ~~aLk~AdVGIamg-~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~-~~-~ 682 (962)
+||||+|||||||| +|+|+||+|||+++++++|..|+.+|++||++|+|++|++.|.+++|+..++.++++.++ .+ +
T Consensus 651 apALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~ 730 (917)
T COG0474 651 APALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFL 730 (917)
T ss_pred HHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999998 899999999999999999999999999999999999999999999999877766666554 44 5
Q ss_pred CchHHHHHHHHHHhhhc-hhccccCCC------CCCCCCCc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 044543 683 DFSPFMVLIIAILNDGT-IMTISKDRV------KPSPVPDT--WKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEK 753 (962)
Q Consensus 683 ~~~p~~il~i~l~~~~~-~~~l~~d~~------~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 753 (962)
||.|+|++|+|+++|++ +++++.++. +|++.|.. |+.+.++.+++..|...++++++.|++.+.... ...
T Consensus 731 p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~-~~~ 809 (917)
T COG0474 731 PLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFI-ANT 809 (917)
T ss_pred cHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccc
Confidence 89999999999999996 688877642 22234555 777777777888788888888877766653211 111
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHHHHHhhhccCCCCcccc---hhHHHHHHHHHHHHHHHHHHHhhcc--ccccccch
Q 044543 754 FGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLER---PGLLLIAAFIIAQLVATLIAVYANF--GFARIHGI 828 (962)
Q Consensus 754 ~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 828 (962)
.+... ......++.|+.++++++++.+..|+.+.++++. +++.+++++++..++..++.++... ..+...++
T Consensus 810 ~~~~~---~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~ 886 (917)
T COG0474 810 LGLDL---FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPL 886 (917)
T ss_pred cchhh---HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCC
Confidence 11000 1566789999999999999999999987555544 4556666666655555444333221 23445555
Q ss_pred hHHHHHHHHHHH
Q 044543 829 GWGWVGVIWLYS 840 (962)
Q Consensus 829 ~~~~~~~~~~~~ 840 (962)
++.-|+++..+.
T Consensus 887 ~~~~~~~~~~~~ 898 (917)
T COG0474 887 SLFEWLIAIAVA 898 (917)
T ss_pred cHHHHHHHHHHH
Confidence 544333333333
No 6
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=8.4e-129 Score=1201.41 Aligned_cols=805 Identities=26% Similarity=0.412 Sum_probs=676.4
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccc-chHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCC
Q 044543 26 DLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPP 104 (962)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~ 104 (962)
..+..+.+|+++.|+++.+|||++|+++|+++||+|+++.+++ ++|+.|+++|++|++++++++++++++++
T Consensus 48 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------- 120 (902)
T PRK10517 48 KAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------- 120 (902)
T ss_pred HHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------
Confidence 4557899999999999999999999999999999999998765 57899999999999999999999999975
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEEC------CeEEEEECcCcCCCcEEEEeCCCeeecc
Q 044543 105 DWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRD------GAWREQEASILVPGDVISIKLGDIIPAD 178 (962)
Q Consensus 105 ~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rd------g~~~~i~~~~Lv~GDiI~l~~Gd~VPaD 178 (962)
+|.++++|+++++++.++++++|+|++++.++|+++.+++++|+|| |++++|++++|||||+|.|++||+||||
T Consensus 121 ~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 121 DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 8999999999999999999999999999999999999999999999 7899999999999999999999999999
Q ss_pred eEEEecCCeeEecccccCCCeeeecCCCC-------------cccccceeecceEEEEEEEecchhHHHhHHHhhhcc-C
Q 044543 179 ARLLDGDPLKIDQSALTGESLPVTKMPGD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-N 244 (962)
Q Consensus 179 ~~ll~g~~~~Vdes~LTGEs~pv~K~~g~-------------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~ 244 (962)
|+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|.+||++++++++ .
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999999874 799999999999999999999999999999999876 5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCccc
Q 044543 245 QEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 324 (962)
Q Consensus 245 ~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilv 324 (962)
+++++|+.+++++++++.+.++++.+.+++ +...+.+|..++..++++++++|||+||++++++++.|+.+|+++|+++
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i-~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilV 359 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLI-NGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIV 359 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhH-HHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEE
Confidence 789999999999887655444333332222 2223457888999999999999999999999999999999999999999
Q ss_pred ccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhcccc--CCChHHHHHHHhhcCh--hh
Q 044543 325 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVE--NQDAIDACIVGMLGDA--KE 400 (962)
Q Consensus 325 k~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~--~~~~~~~al~~~~~~~--~~ 400 (962)
|+++++|+||++|+||||||||||+|+|+|.+.. ...+.+.++++.+++.++... ..||+|.|++.++... ..
T Consensus 360 k~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~---~~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~ 436 (902)
T PRK10517 360 KRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHT---DISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARS 436 (902)
T ss_pred ecchhhhhccCCCEEEecCCCccccceEEEEEEe---cCCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhh
Confidence 9999999999999999999999999999998753 112345567777777655432 3699999999887532 22
Q ss_pred hhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhcc----------chHHHHHHHHHHHHHHhcCCeE
Q 044543 401 ARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNL----------REDVRNKAHTIIDKFADRGLRS 470 (962)
Q Consensus 401 ~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~ 470 (962)
....++.++.+||+|.+|||++++.+.++.+..++||+||.++++|+. +++.++++.+..++++++|+|+
T Consensus 437 ~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 516 (902)
T PRK10517 437 LASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRV 516 (902)
T ss_pred hhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 345678889999999999999998877777889999999999999963 2344566778889999999999
Q ss_pred EEEEeecCCCCCC---CCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCc
Q 044543 471 LAVAEQSVPEKTK---ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS 547 (962)
Q Consensus 471 L~~A~~~~~~~~~---~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~ 547 (962)
+++||++++..+. ...|++++|+|+++|+||||+|++++|++|+++||+|+|+||||+.||.++|+++||.. .
T Consensus 517 lavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~ 592 (902)
T PRK10517 517 VAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----G 592 (902)
T ss_pred EEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----c
Confidence 9999998764321 12478999999999999999999999999999999999999999999999999999952 3
Q ss_pred ccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHh
Q 044543 548 SALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARG 627 (962)
Q Consensus 548 ~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~ 627 (962)
.++.|.+.+ .++++++++.+++.+||||++|+||.++|+.||++|++|+|||||+||+||||+||||||||+|+|+||+
T Consensus 593 ~v~~G~el~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAke 671 (902)
T PRK10517 593 EVLIGSDIE-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIARE 671 (902)
T ss_pred CceeHHHHH-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHH
Confidence 566676554 6788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCchHHHHHHHHHHhhhchhccccC
Q 044543 628 ASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWK-FDFSPFMVLIIAILNDGTIMTISKD 706 (962)
Q Consensus 628 aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~~~-~~~~p~~il~i~l~~~~~~~~l~~d 706 (962)
+||+||++|+|++|++++++||++|+||+|++.|.++.|+..++.+++.+++++ +|+.|+|++|+|+++|++.+++++|
T Consensus 672 aADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d 751 (902)
T PRK10517 672 AADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFD 751 (902)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCC
Confidence 999999999999999999999999999999999999999988887777766667 6999999999999999878999999
Q ss_pred CCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCCChhHHHHHHHHHHHHHHHHHHhh
Q 044543 707 RVKPSP--VPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFV 784 (962)
Q Consensus 707 ~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 784 (962)
+++++. +|.+|+...+...+++.|++.+++++..|++++.. ++... .......++..|+.+.+++.+++++
T Consensus 752 ~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~F~~~~~~q~~~~~~ 824 (902)
T PRK10517 752 NVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHANT-PETQTLFQSGWFVVGLLSQTLIVHM 824 (902)
T ss_pred CCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccccc-hhhHhHHHHHHHHHHHHHHHHHHHh
Confidence 998874 67889888888888888999888887766654321 11110 0000124456699999999999999
Q ss_pred hccCC-CCcccchhHHHHHHHHHHHHHHHHHHHhhccccccccchh--HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 785 TRSRS-WSFLERPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIG--WGWVGVIWLYSIVFYIPLDVLKFIVR 855 (962)
Q Consensus 785 ~r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~K~~~r 855 (962)
.|+++ ++|.++|.+..+++.++.+++...+++..-.+++.+.+++ +..|+++++++.. ++.++.|..+.
T Consensus 825 ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~ 896 (902)
T PRK10517 825 IRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYS 896 (902)
T ss_pred hccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 99987 4555555555444444444433333211112345566666 4444443444433 56788776533
No 7
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.5e-128 Score=1201.09 Aligned_cols=815 Identities=24% Similarity=0.403 Sum_probs=678.0
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHHHHHHHHHHHcC----C
Q 044543 26 DLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEIAAIMAIALANG----G 100 (962)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~----~ 100 (962)
..|..+.+|+++.|+++.+|||++|+++|+++||+|+++.++ .++|+.|+++|++|+.++++++++++++++.. .
T Consensus 26 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~ 105 (903)
T PRK15122 26 REAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRR 105 (903)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccC
Confidence 456889999999999999999999999999999999999766 56889999999999999999999999987521 1
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEEC------CeEEEEECcCcCCCcEEEEeCCCe
Q 044543 101 GKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRD------GAWREQEASILVPGDVISIKLGDI 174 (962)
Q Consensus 101 ~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rd------g~~~~i~~~~Lv~GDiI~l~~Gd~ 174 (962)
+...+|.++++|+++++++++++++||++++++.++|+++.+++++|+|| |++++|++++|||||+|.|++||+
T Consensus 106 ~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~ 185 (903)
T PRK15122 106 GEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDM 185 (903)
T ss_pred CccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCE
Confidence 22358999999999999999999999999999999999999999999999 489999999999999999999999
Q ss_pred eecceEEEecCCeeEecccccCCCeeeecCC-----------------------CCcccccceeecceEEEEEEEecchh
Q 044543 175 IPADARLLDGDPLKIDQSALTGESLPVTKMP-----------------------GDEVFSGSTCKQGEIEAVVIATGVHT 231 (962)
Q Consensus 175 VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~-----------------------g~~v~~Gs~v~~G~~~~~V~~tG~~T 231 (962)
|||||+|++|+++.||||+|||||.|+.|.+ +|++|+||.|.+|+++++|++||.+|
T Consensus 186 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T 265 (903)
T PRK15122 186 IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265 (903)
T ss_pred EeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence 9999999999889999999999999999975 36899999999999999999999999
Q ss_pred HHHhHHHhhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHH
Q 044543 232 FFGKAAHLVDSTNQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMA 311 (962)
Q Consensus 232 ~~gki~~l~~~~~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~ 311 (962)
++||+++++.+.+.++++|+.++++++++..+..+++.+.+++. .....+|.+++..++++++++|||+||++++++++
T Consensus 266 ~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~-~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La 344 (903)
T PRK15122 266 YFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLIN-GFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLA 344 (903)
T ss_pred HhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 99999999987667789999999988765443332222222221 22345788899999999999999999999999999
Q ss_pred HHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccc--cCCChHHH
Q 044543 312 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRV--ENQDAIDA 389 (962)
Q Consensus 312 ~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~--~~~~~~~~ 389 (962)
.|+.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++.+++.++.. ..+||+|.
T Consensus 345 ~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~ 421 (903)
T PRK15122 345 KGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQ 421 (903)
T ss_pred HHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHH
Confidence 999999999999999999999999999999999999999999988642 2233456677776654332 24599999
Q ss_pred HHHHhhcChh--hhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhcc----------chHHHHHHH
Q 044543 390 CIVGMLGDAK--EARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNL----------REDVRNKAH 457 (962)
Q Consensus 390 al~~~~~~~~--~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~ 457 (962)
|++.++.+.. .....++.++.+||++.+|+|++++++.+|+++.++|||||.++++|.. +++.++++.
T Consensus 422 All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 501 (903)
T PRK15122 422 AVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLL 501 (903)
T ss_pred HHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHH
Confidence 9998875321 1234678889999999999999999877888999999999999999963 233456778
Q ss_pred HHHHHHHhcCCeEEEEEeecCCCCC-----CCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHH
Q 044543 458 TIIDKFADRGLRSLAVAEQSVPEKT-----KESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK 532 (962)
Q Consensus 458 ~~i~~~a~~GlR~L~~A~~~~~~~~-----~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~ 532 (962)
+.+++++.+|+|++++||++++.++ .+..|++++|+|+++++||||+|++++|++|+++||+|+|+||||+.||.
T Consensus 502 ~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~ 581 (903)
T PRK15122 502 ALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTA 581 (903)
T ss_pred HHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 8889999999999999999876532 12357899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcC
Q 044543 533 ETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKA 612 (962)
Q Consensus 533 ~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~A 612 (962)
+||+++||.. ..++.|.+.+ .++++++++.+++.+||||++|+||+++|+.||++|++|+|||||+||+||||+|
T Consensus 582 aIA~~lGI~~----~~vi~G~el~-~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~A 656 (903)
T PRK15122 582 KICREVGLEP----GEPLLGTEIE-AMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDA 656 (903)
T ss_pred HHHHHcCCCC----CCccchHhhh-hCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhC
Confidence 9999999953 3466666554 6788899999999999999999999999999999999999999999999999999
Q ss_pred CeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCchHHHHHH
Q 044543 613 DIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWK-FDFSPFMVLI 691 (962)
Q Consensus 613 dVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~~~-~~~~p~~il~ 691 (962)
|||||||+|+|+||++||+||++|+|++|+.++++||++|+|++|++.|.++.|+..++.+++..++.+ +|+.|+|++|
T Consensus 657 DVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~ 736 (903)
T PRK15122 657 DVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLL 736 (903)
T ss_pred CEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987776665555555 7999999999
Q ss_pred HHHHhhhchhccccCCCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCCChhHHHHH
Q 044543 692 IAILNDGTIMTISKDRVKPSP--VPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAA 769 (962)
Q Consensus 692 i~l~~~~~~~~l~~d~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~ 769 (962)
+|+++|++.+++++|+++++. +|++|+.+.+-..+++.|.+.+++++..|++.+.. + . .+. . ......++.
T Consensus 737 ~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~-~--~~~--~-~~~~~~~t~ 809 (903)
T PRK15122 737 QNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV-F-A--ANS--V-EMQALFQSG 809 (903)
T ss_pred HHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH-h-c--cCc--H-hhhhhhHHH
Confidence 999999888999999988765 77888766655566667887777777666553211 0 0 010 0 000124577
Q ss_pred HHHHHHHHHHHHHhhhccCC-CCcccchhHHHHHHHHHHHHHHHHHHH-hhccccccccchhHHHHHHHHHHHHHHHHHH
Q 044543 770 VYLQVSIVSQALIFVTRSRS-WSFLERPGLLLIAAFIIAQLVATLIAV-YANFGFARIHGIGWGWVGVIWLYSIVFYIPL 847 (962)
Q Consensus 770 ~~~~~~~~~~~~~~~~r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (962)
.|+.+++++.+++|+.|+++ ++|...+.+..+++.++.+++.+.+.+ .. -.++.+.++++..|++++.++++.+++.
T Consensus 810 ~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~ 888 (903)
T PRK15122 810 WFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPL-GAMVGLEPLPWSYFPWLAATLLGYCLVA 888 (903)
T ss_pred HHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHH-HHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999987 444433433333333333333332221 01 1345677788888888788888888889
Q ss_pred HHHHHHHHHh
Q 044543 848 DVLKFIVRYA 857 (962)
Q Consensus 848 ~~~K~~~r~~ 857 (962)
++.|.+.++.
T Consensus 889 e~~k~~~~r~ 898 (903)
T PRK15122 889 QGMKRFYIRR 898 (903)
T ss_pred HHHHHHHhhh
Confidence 9988554433
No 8
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.1e-127 Score=1192.54 Aligned_cols=808 Identities=25% Similarity=0.395 Sum_probs=670.9
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCC
Q 044543 25 VDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKP 103 (962)
Q Consensus 25 ~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~ 103 (962)
.+.|.++.+++++.|+++.+|||++|+++|+++||+|+++.++ .++|+.|+++|++|++++++++++++++++
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------ 86 (867)
T TIGR01524 13 LKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------ 86 (867)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh------
Confidence 3556889999999999999999999999999999999998876 468899999999999999999999999875
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEE------CCeEEEEECcCcCCCcEEEEeCCCeeec
Q 044543 104 PDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLR------DGAWREQEASILVPGDVISIKLGDIIPA 177 (962)
Q Consensus 104 ~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~R------dg~~~~i~~~~Lv~GDiI~l~~Gd~VPa 177 (962)
+|.++++|++++++++++++++|++++++.++|+++.+++++|+| ||++++|+++||||||+|.|++||+|||
T Consensus 87 -~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 -DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred -hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 899999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ceEEEecCCeeEecccccCCCeeeecCCCC-------------cccccceeecceEEEEEEEecchhHHHhHHHhhhccC
Q 044543 178 DARLLDGDPLKIDQSALTGESLPVTKMPGD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 244 (962)
Q Consensus 178 D~~ll~g~~~~Vdes~LTGEs~pv~K~~g~-------------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~ 244 (962)
||+|++|+++.||||+|||||.|+.|.+|+ ++|+||.+.+|+++++|++||.+|.+||+++++++.+
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~ 245 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERR 245 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCC
Confidence 999999988999999999999999999864 6999999999999999999999999999999998866
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCccc
Q 044543 245 QEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 324 (962)
Q Consensus 245 ~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilv 324 (962)
+++++|+.++++++++..+.++++.+.+++ +.+...+|.+++..++++++++|||+||++++++++.|+.+|+++|+++
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilv 324 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVVLMI-NGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIV 324 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHheeh-HHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEE
Confidence 778999999999988655444433332222 2223457888899999999999999999999999999999999999999
Q ss_pred ccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhcccc--CCChHHHHHHHhhcCh--hh
Q 044543 325 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVE--NQDAIDACIVGMLGDA--KE 400 (962)
Q Consensus 325 k~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~--~~~~~~~al~~~~~~~--~~ 400 (962)
|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++.+++.++... .+||+|.|++.++.+. ..
T Consensus 325 k~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~ 401 (867)
T TIGR01524 325 KELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQ 401 (867)
T ss_pred ccchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhh
Confidence 99999999999999999999999999999988541 22345566777776554432 3599999999887542 22
Q ss_pred hhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhcc----------chHHHHHHHHHHHHHHhcCCeE
Q 044543 401 ARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNL----------REDVRNKAHTIIDKFADRGLRS 470 (962)
Q Consensus 401 ~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~ 470 (962)
.+..++.++.+||+|.+|+|++++.+.++.++.++||+||.++++|+. +++.++++.+.+++++++|+|+
T Consensus 402 ~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 481 (867)
T TIGR01524 402 TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRV 481 (867)
T ss_pred HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 345678889999999999999998876666789999999999999963 2344567888899999999999
Q ss_pred EEEEeecCCCCCC---CCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCc
Q 044543 471 LAVAEQSVPEKTK---ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS 547 (962)
Q Consensus 471 L~~A~~~~~~~~~---~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~ 547 (962)
+++||++++.++. +..|++|+|+|+++++||||+|++++|++|+++||+|+|+|||++.||.++|+++||..+
T Consensus 482 lavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~---- 557 (867)
T TIGR01524 482 IAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN---- 557 (867)
T ss_pred EEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC----
Confidence 9999998765432 124789999999999999999999999999999999999999999999999999999632
Q ss_pred ccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHh
Q 044543 548 SALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARG 627 (962)
Q Consensus 548 ~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~ 627 (962)
.++.|.+.+ .++++++++.+++.++|||++|+||+++|+.||++|++|+|+|||+||+||||+||||||||+|+|+||+
T Consensus 558 ~v~~g~~l~-~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~ 636 (867)
T TIGR01524 558 DFLLGADIE-ELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKE 636 (867)
T ss_pred CeeecHhhh-hCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHH
Confidence 456665543 6678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCchHHHHHHHHHHhhhchhccccC
Q 044543 628 ASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWK-FDFSPFMVLIIAILNDGTIMTISKD 706 (962)
Q Consensus 628 aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~~~-~~~~p~~il~i~l~~~~~~~~l~~d 706 (962)
+||+||++++|++|+.++++||++|+||+|++.|.++.|+..++.+++..++.+ +|++|+|++|+|+++|++.+++++|
T Consensus 637 aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~ 716 (867)
T TIGR01524 637 ASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWD 716 (867)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999988877666666555 7999999999999999878999999
Q ss_pred CCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCCChhHHHHHHHHHHHHHHHHHHhh
Q 044543 707 RVKPSP--VPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFV 784 (962)
Q Consensus 707 ~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 784 (962)
+++++. +|++|+.+.+...+++.|++.+++++..|++.+... +..+. ......++..|+.+++++.+++|+
T Consensus 717 ~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~t~~f~~~~~~~~~~~~~ 789 (867)
T TIGR01524 717 KMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVF------SANTV-EEQALFQSGWFVVGLLSQTLVVHM 789 (867)
T ss_pred CCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHh------cccch-hhhhHHHHHHHHHHHHHHHHHHHh
Confidence 987773 566688777777788889988887776665543211 00000 012235678899999999999999
Q ss_pred hccCC-CCcccchhHHHHHHHHHHHHHHHHHHHhhccccccccchhHH--HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044543 785 TRSRS-WSFLERPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWG--WVGVIWLYSIVFYIPLDVLKFIVRYA 857 (962)
Q Consensus 785 ~r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~K~~~r~~ 857 (962)
.|+++ ++|..++.+..+++.++.+++.+.++..+--.++.+.++++. -|++++.++++ ++.++.|.+..+.
T Consensus 790 ~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~~~~ 863 (867)
T TIGR01524 790 IRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFYIRR 863 (867)
T ss_pred hCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHHHHh
Confidence 99987 444433333333333333332222211000123445554332 23333333333 6678888654443
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.2e-124 Score=1181.80 Aligned_cols=832 Identities=23% Similarity=0.365 Sum_probs=680.2
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHHHHHHHHHHHcC-
Q 044543 23 ENVDLERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEIAAIMAIALANG- 99 (962)
Q Consensus 23 ~~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~- 99 (962)
..+|+|.++.+|+++.|+++ .+|||++|+++|+++||+|+++.++ .++|+.|+++|++|+++++++++++++++...
T Consensus 13 ~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~ 92 (997)
T TIGR01106 13 VEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQ 92 (997)
T ss_pred ccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 46899999999999999998 6799999999999999999998655 56889999999999999999999998875321
Q ss_pred -----CCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCe
Q 044543 100 -----GGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDI 174 (962)
Q Consensus 100 -----~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~ 174 (962)
.....+|.++++|+++++++++++++||+++++++++|++..+++++|+|||++++|++++|||||+|.|++||+
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~ 172 (997)
T TIGR01106 93 ASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDR 172 (997)
T ss_pred hccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCE
Confidence 112347899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecceEEEecCCeeEecccccCCCeeeecCCCC----------cccccceeecceEEEEEEEecchhHHHhHHHhhhcc-
Q 044543 175 IPADARLLDGDPLKIDQSALTGESLPVTKMPGD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 243 (962)
Q Consensus 175 VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~----------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~- 243 (962)
|||||+|++|+.+.||||+|||||.|+.|.+++ ++|+||.+.+|++.++|++||.+|.+||+++++++.
T Consensus 173 IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 252 (997)
T TIGR01106 173 IPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLE 252 (997)
T ss_pred EeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcc
Confidence 999999999988999999999999999998864 699999999999999999999999999999988765
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcc
Q 044543 244 NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 323 (962)
Q Consensus 244 ~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~il 323 (962)
.+++++|+.++++.+++..+++++.++.++ .+...+..|.+.+..++++++++|||+||++++++++.++.+|+++|++
T Consensus 253 ~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~il 331 (997)
T TIGR01106 253 NGKTPIAIEIEHFIHIITGVAVFLGVSFFI-LSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCL 331 (997)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcE
Confidence 467999999999988765544333332222 2233456778888899999999999999999999999999999999999
Q ss_pred cccCchHHhhcCceEEEecccccccCCceEEEEEeeee--cc-c--------CCCh-----HHHHHHHHHhccc------
Q 044543 324 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEV--FV-K--------DMDK-----DTVILYGARASRV------ 381 (962)
Q Consensus 324 vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~-~--------~~~~-----~~~l~~a~~~~~~------ 381 (962)
+|+++++|+||++++||||||||||+|+|+|.++++.. +. . ..+. +.++..++.|+..
T Consensus 332 vk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~ 411 (997)
T TIGR01106 332 VKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQ 411 (997)
T ss_pred ecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeecccc
Confidence 99999999999999999999999999999999876421 10 0 0111 2455666666431
Q ss_pred ---------cCCChHHHHHHHhhc----ChhhhhcCceEeeecCCCCCCceEEEEEEc--CC-CCEEEEEeCcHHHHHHH
Q 044543 382 ---------ENQDAIDACIVGMLG----DAKEARAGITELHFLPFNPVEKRTAITYID--SD-GSWHRISKGAPEQIIEL 445 (962)
Q Consensus 382 ---------~~~~~~~~al~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~--~~-g~~~~~~KGa~e~il~~ 445 (962)
..+||+|.|++.++. +..+.+..++.++.+||+|++|||++++.. .+ +++++++|||||.|+++
T Consensus 412 ~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~ 491 (997)
T TIGR01106 412 ENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILER 491 (997)
T ss_pred CCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHH
Confidence 125899999998764 234456678899999999999999988763 22 46789999999999999
Q ss_pred hcc----------chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC-----------CCCCCCceEEEEeecCCCCCc
Q 044543 446 CNL----------REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK-----------ESPGGPWQFVGLLPLFDPPRH 504 (962)
Q Consensus 446 ~~~----------~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~-----------~~~e~~l~llG~i~i~D~lr~ 504 (962)
|+. +++.++.+.+.+++|+++|+||+++||+.+++++. +..|++|+|+|+++++||||+
T Consensus 492 c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~ 571 (997)
T TIGR01106 492 CSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRA 571 (997)
T ss_pred hhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChH
Confidence 962 23557778889999999999999999998865321 123789999999999999999
Q ss_pred cHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC----------------------cccccccchhccCCcc
Q 044543 505 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALLGQIKDANISAL 562 (962)
Q Consensus 505 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~----------------------~~~l~~~~~~~~~~~~ 562 (962)
|++++|++|+++||+|+|+|||++.||.++|+++|+.++... ..+++|.+.+ .++++
T Consensus 572 ~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~-~l~~~ 650 (997)
T TIGR01106 572 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK-DMTSE 650 (997)
T ss_pred HHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhh-hCCHH
Confidence 999999999999999999999999999999999999653211 1245555443 56677
Q ss_pred hHHHHhhhcc--eEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc-CchHHHHhcccccccCCCch
Q 044543 563 PVDELIEKAD--GFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLS 639 (962)
Q Consensus 563 ~~~~~~~~~~--v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg-~gt~~a~~aaDivl~~~~~~ 639 (962)
++++++++.. ||||++|+||+++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+|+++||++|++|+|+
T Consensus 651 el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~ 730 (997)
T TIGR01106 651 QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFA 730 (997)
T ss_pred HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHH
Confidence 8888888765 99999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCchHHHHHHHHHHhhhc-hhccccCCCCCC---CCC
Q 044543 640 VIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALI-WKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PVP 714 (962)
Q Consensus 640 ~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~-~~~~~~p~~il~i~l~~~~~-~~~l~~d~~~~~---~~~ 714 (962)
+|+.++++||++|+|+++++.|.+++|+..++..+++.++ .+.|++|+|++|+|+++|++ ++++++|++.+. ++|
T Consensus 731 ~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P 810 (997)
T TIGR01106 731 SIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCC
Confidence 9999999999999999999999999999877766666554 45689999999999999985 799999876543 123
Q ss_pred Ccc-----chHH-HHHHHHHHHHHHHHHHHHHHHHHHh-hccccc-cccc---------cccCCC-------------hh
Q 044543 715 DTW-----KLKE-IFATGIVLGTYLAVMTVLFFWAIHS-STFFSE-KFGV---------RSIRDS-------------PH 764 (962)
Q Consensus 715 ~~~-----~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~-~~g~---------~~~~~~-------------~~ 764 (962)
..+ ..+. ++.+.++.|+++++..++.|++.+. .+|... .++. .+..+. ..
T Consensus 811 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (997)
T TIGR01106 811 RNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEF 890 (997)
T ss_pred cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhh
Confidence 222 2222 3344556699999888877665442 122110 0110 000000 01
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCc--ccchhHHHHHHHHHHHHHHHHHHHhhc--cccccccchhHHHHHHHHHHH
Q 044543 765 ELTAAVYLQVSIVSQALIFVTRSRSWSF--LERPGLLLIAAFIIAQLVATLIAVYAN--FGFARIHGIGWGWVGVIWLYS 840 (962)
Q Consensus 765 ~~~t~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 840 (962)
+.+|++|..+++++.++++++|+.+.++ ...++++++.++++..++..++ .|.+ -.++.+.+++|.+|+++++++
T Consensus 891 ~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~ 969 (997)
T TIGR01106 891 TCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCPGMGVALRMYPLKPTWWFCAFPYS 969 (997)
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhhhhHHHhccccCCHHHHHHHHHHH
Confidence 4689999999999999999999976432 2345556776666655554444 3433 345677888899899888999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 044543 841 IVFYIPLDVLKFIVRYA 857 (962)
Q Consensus 841 ~~~~~~~~~~K~~~r~~ 857 (962)
++.++..++.|++.|++
T Consensus 970 ~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 970 LLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 99888999999887764
No 10
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=5.9e-123 Score=1157.07 Aligned_cols=800 Identities=27% Similarity=0.416 Sum_probs=674.8
Q ss_pred ccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHhhcCCCccCccc-cchHHHHHHhh-hhhHHHHHHHHHHHHHHHHcCCC
Q 044543 26 DLERIPINEVFEQLKCT-REGLS-NEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFM-WNPLSWVMEIAAIMAIALANGGG 101 (962)
Q Consensus 26 ~~~~~~~~~~~~~l~~~-~~GLt-~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~-~~~~~~~l~~~ail~~~l~~~~~ 101 (962)
++|.++.+++++.|+++ .+||| ++|+++|+++||+|+++.++ .++|+.|+++| ++|++++++++++++++++
T Consensus 3 ~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g---- 78 (884)
T TIGR01522 3 QYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG---- 78 (884)
T ss_pred chhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc----
Confidence 67899999999999998 56999 99999999999999999765 67889999999 9999999999999999975
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEE
Q 044543 102 KPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARL 181 (962)
Q Consensus 102 ~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~l 181 (962)
+|.+++.|++++++++.+++++|+++++++++|++..+++++|+|||++++|+++||||||+|.|++||+|||||+|
T Consensus 79 ---~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 ---NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred ---chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeeEecccccCCCeeeecCCCC--------------cccccceeecceEEEEEEEecchhHHHhHHHhhhcc-CCC
Q 044543 182 LDGDPLKIDQSALTGESLPVTKMPGD--------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQE 246 (962)
Q Consensus 182 l~g~~~~Vdes~LTGEs~pv~K~~g~--------------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~ 246 (962)
++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|.+||+++++++. ..+
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 99977999999999999999999863 799999999999999999999999999999999876 467
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCccccc
Q 044543 247 GHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKR 326 (962)
Q Consensus 247 ~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~ 326 (962)
+++|+.+++++.++....++.+++.+++.| ..+.++.+++..++++++++|||+||++++++++.++.+|+++|+++|+
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~ 314 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRK 314 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccc
Confidence 899999999998765443332222223333 3456788899999999999999999999999999999999999999999
Q ss_pred CchHHhhcCceEEEecccccccCCceEEEEEeeee-cc---c--CC-------------------ChHHHHHHHHHhccc
Q 044543 327 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEV-FV---K--DM-------------------DKDTVILYGARASRV 381 (962)
Q Consensus 327 ~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~-~~---~--~~-------------------~~~~~l~~a~~~~~~ 381 (962)
++++|+||++|+||||||||||+|+|+|.++.... .. . ++ ...+++..++.|+..
T Consensus 315 ~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 394 (884)
T TIGR01522 315 LPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA 394 (884)
T ss_pred hHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCC
Confidence 99999999999999999999999999999876421 00 0 00 013455556555432
Q ss_pred c--------CCChHHHHHHHhhcCh--hhhhcCceEeeecCCCCCCceEEEEEEcC-CCCEEEEEeCcHHHHHHHhcc--
Q 044543 382 E--------NQDAIDACIVGMLGDA--KEARAGITELHFLPFNPVEKRTAITYIDS-DGSWHRISKGAPEQIIELCNL-- 448 (962)
Q Consensus 382 ~--------~~~~~~~al~~~~~~~--~~~~~~~~~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~~~~-- 448 (962)
. .+||+|.|++.++... ...+..++.++.+||+|.+|||+++++.. +++++.++|||||.|+.+|..
T Consensus 395 ~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~ 474 (884)
T TIGR01522 395 KFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQ 474 (884)
T ss_pred eecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhh
Confidence 1 2479999999887532 22345678899999999999999988753 577899999999999999963
Q ss_pred ---------chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCc
Q 044543 449 ---------REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVN 519 (962)
Q Consensus 449 ---------~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~ 519 (962)
+++.++++.+.+++++++|+|++++||+++ +.+|+|+|+++++||||+|++++|++|+++||+
T Consensus 475 ~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~ 546 (884)
T TIGR01522 475 KKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVR 546 (884)
T ss_pred hcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCe
Confidence 134456778889999999999999999875 457999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEE
Q 044543 520 VKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMT 599 (962)
Q Consensus 520 v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~mi 599 (962)
++|+|||++.||.++|+++||..+. ...+.|.+.+ .++++++++.+.+..||||++|+||.++|+.+|++|++|+||
T Consensus 547 v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v~g~~l~-~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mv 623 (884)
T TIGR01522 547 IIMITGDSQETAVSIARRLGMPSKT--SQSVSGEKLD-AMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMT 623 (884)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCC--CceeEhHHhH-hCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEE
Confidence 9999999999999999999997542 3345555544 677888999999999999999999999999999999999999
Q ss_pred cCCcCChhhhhcCCeeEEcc-CchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 044543 600 GDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI-A 677 (962)
Q Consensus 600 GDG~ND~~aLk~AdVGIamg-~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~-~ 677 (962)
|||+||+|||++|||||||| +|+|+|+++||++|++|+|+.|+.++++||++|+|+++++.|.++.|+..++.+++. .
T Consensus 624 GDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~ 703 (884)
T TIGR01522 624 GDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATL 703 (884)
T ss_pred CCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999999999999999998 799999999999999999999999999999999999999999999999776655443 4
Q ss_pred HhhcCCchHHHHHHHHHHhhhc-hhccccCCCCCC---CCCC----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 044543 678 LIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PVPD----TWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTF 749 (962)
Q Consensus 678 ~~~~~~~~p~~il~i~l~~~~~-~~~l~~d~~~~~---~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 749 (962)
+..+.|++|+|++|+|+++|++ ++++++|++.+. ++|. +...+.++...+++|+++++++++.|++.+..
T Consensus 704 ~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-- 781 (884)
T TIGR01522 704 MGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD-- 781 (884)
T ss_pred HcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--
Confidence 4466799999999999999987 589999876543 1222 23345566777888999888877766643310
Q ss_pred ccccccccccCCChhHHHHHHHHHHHHHHHHHHhhhccCCCCccc---chhHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 044543 750 FSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLE---RPGLLLIAAFIIAQLVATLIAVYAN--FGFAR 824 (962)
Q Consensus 750 ~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 824 (962)
+ ....+.+|++|..+++++.++.+++|+++.+++. ..|.++++++++..++..++ +|.+ -.++.
T Consensus 782 -----~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~p~~~~~f~ 850 (884)
T TIGR01522 782 -----G-----VITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLV-IYFPPLQSVFQ 850 (884)
T ss_pred -----C-----cchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHc
Confidence 1 0234567999999999999999999997755433 23456666666665554333 4432 24556
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044543 825 IHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRYA 857 (962)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~ 857 (962)
+.+++|..|+++++++++.++..+++|++.|++
T Consensus 851 ~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 851 TEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 778889888888999999999999999887653
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=7e-123 Score=1163.02 Aligned_cols=816 Identities=22% Similarity=0.340 Sum_probs=665.2
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHhhcCCCccCcccc-chHHHHHHhhhhhHHHHHHHHHHHHHHHHc------CC
Q 044543 31 PINEVFEQLKCT-REGLS--NEEGQKRLVIFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEIAAIMAIALAN------GG 100 (962)
Q Consensus 31 ~~~~~~~~l~~~-~~GLt--~~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~~l~~~ail~~~l~~------~~ 100 (962)
+.+++++.|+++ ++||| ++||++|+++||+|+++.+++ ++|+.|+++|++|++++++++++++++++. ..
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 789999999998 66999 999999999999999998765 678899999999999999999999999762 12
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcC-CCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecce
Q 044543 101 GKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAG-LAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADA 179 (962)
Q Consensus 101 ~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~-~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~ 179 (962)
++..+|.+++.|+++++++.++++++|++++++.++|++. .+++++|+|||++++|++++|||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 3345899999999999999999999999999999999864 478999999999999999999999999999999999999
Q ss_pred EEEecCCeeEecccccCCCeeeecCCCCc--ccccceeecceEEEEEEEecchhHHHhHHHhhhccCCCChHHHHHHHHH
Q 044543 180 RLLDGDPLKIDQSALTGESLPVTKMPGDE--VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAIG 257 (962)
Q Consensus 180 ~ll~g~~~~Vdes~LTGEs~pv~K~~g~~--v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l~~~~~~i~ 257 (962)
+|++|+++.||||+|||||.|+.|.+++. +|+||.+.+|++.++|++||.+|.+||++++++.+++++++|+.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999789999999999999999998775 9999999999999999999999999999999987767789999999988
Q ss_pred HHHHHHHHHHHHHHHHHH---hhcc---c---------cchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCc
Q 044543 258 NFCICSIAIGMVIEIIVM---YPIQ---H---------RAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 322 (962)
Q Consensus 258 ~~~~~~i~~~~~~~~~~~---~~~~---~---------~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~i 322 (962)
+++..++++++++.++++ |... + .++.+.+..++++++++|||+||++++++++.++.+|+++|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 775443322222211111 1111 1 246677888999999999999999999999999999999999
Q ss_pred ccccCchHHhhcCceEEEecccccccCCceEEEEEeeeec--c-cC----CC--hHHHHHHH-HHhcccc----------
Q 044543 323 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVF--V-KD----MD--KDTVILYG-ARASRVE---------- 382 (962)
Q Consensus 323 lvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~--~-~~----~~--~~~~l~~a-~~~~~~~---------- 382 (962)
++|+++++|+||++|+||||||||||+|+|+|.++..... . .+ .+ ..+++..+ ++++...
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 9999999999999999999999999999999998764321 0 00 01 11223333 3333211
Q ss_pred -CCChHHHHHHHhhc----ChhhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccc--------
Q 044543 383 -NQDAIDACIVGMLG----DAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLR-------- 449 (962)
Q Consensus 383 -~~~~~~~al~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-------- 449 (962)
.+||+|.|++.++. +..+.+..++.++.+||+|.+|||+++++..+++++.++|||||.|+++|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 25899999998874 23334456777889999999999999998777788999999999999999631
Q ss_pred --hHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC---CCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEc
Q 044543 450 --EDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK---ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 524 (962)
Q Consensus 450 --~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~---~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miT 524 (962)
.+.++++.+.+++++++|+|++++||++++.++. +..|++|+|+|+++++||||+|++++|++|+++||+|+|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 0235677888999999999999999998864332 33478999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcC
Q 044543 525 GDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVN 604 (962)
Q Consensus 525 GD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~N 604 (962)
||++.||.++|++|||.++. ..++.|.+.+ .++++++++++++.+||||++|+||+++|+.||++|++|+|||||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~~--~~vi~G~~~~-~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTFG--GLAMEGKEFR-RLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCCC--ceEeeHHHhh-hCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 99999999999999997542 3456665544 56778899999999999999999999999999999999999999999
Q ss_pred ChhhhhcCCeeEEcc-CchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcC
Q 044543 605 DAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI-ALIWKF 682 (962)
Q Consensus 605 D~~aLk~AdVGIamg-~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~-~~~~~~ 682 (962)
|+||||+|||||||| +|+|+|+++||++|++|+|++|+.++++||++|+|+++++.|.+++|+..++..++. .+..++
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 999999999999999999999999999999999999999999999999766555444 444667
Q ss_pred CchHHHHHHHHHHhhhc-hhccccCCCCCC---CCCCcc----chHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 044543 683 DFSPFMVLIIAILNDGT-IMTISKDRVKPS---PVPDTW----KLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKF 754 (962)
Q Consensus 683 ~~~p~~il~i~l~~~~~-~~~l~~d~~~~~---~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 754 (962)
|++|+|++|+|+++|++ ++++++|++.+. .+|.+| ..+.++...+.+|+++++++++.|+.... ++.. .
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~-~ 836 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDV-S 836 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcc-c
Confidence 99999999999999975 799998876544 233332 23456677788899999888876665431 1110 0
Q ss_pred cccc-cCCChhHHHHHHHHHHHHHHHHHHhhhccCCC--Cccc-chhHHHHHHHHHHHHHHHHHHHhhccccccccchhH
Q 044543 755 GVRS-IRDSPHELTAAVYLQVSIVSQALIFVTRSRSW--SFLE-RPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGW 830 (962)
Q Consensus 755 g~~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~--~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (962)
+... ........+|++|.++++++.++.+++|+.+. +|.. ..+++++.++++..++..++..+. -.++++.+++|
T Consensus 837 ~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~-~~~f~~~~l~~ 915 (941)
T TIGR01517 837 GPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFG-GSFFSTVSLSI 915 (941)
T ss_pred CcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHHH-HHHhcccCCCH
Confidence 1000 00123467899999999999999999998653 2211 123355555555544443333332 23556778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 044543 831 GWVGVIWLYSIVFYIPLDVLKFI 853 (962)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~K~~ 853 (962)
..|+.+++++++.+++.++.|++
T Consensus 916 ~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 916 EQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 88888888998888888888875
No 12
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-123 Score=1059.75 Aligned_cols=816 Identities=23% Similarity=0.334 Sum_probs=651.2
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHhhcCCCccCcccc-chHHHHHHhhhhhHHHHHHHHHHHHHHHHcCC-CCCCC
Q 044543 31 PINEVFEQLKCT-REGLSN--EEGQKRLVIFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEIAAIMAIALANGG-GKPPD 105 (962)
Q Consensus 31 ~~~~~~~~l~~~-~~GLt~--~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~-~~~~~ 105 (962)
..+++++.|+|+ .+||+. +|.++|++.||.|.+|++++ ++|+..++.+.+.-.+++.++|++|+.++... +....
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 489999999998 679987 88999999999999998885 55666788888988899999999999987633 33569
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhc-CCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEec
Q 044543 106 WQDFVGIVVLLLINSTISFIEENNAGNAAAALMA-GLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDG 184 (962)
Q Consensus 106 ~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~-~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g 184 (962)
|++++.|++.+++..++....+|+.+++...|++ ....+..|+|||+.++|+..|||||||+.++.||.|||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 9999998876655545555555555555555543 235688999999999999999999999999999999999999999
Q ss_pred CCeeEecccccCCCeeeecCC--CCcccccceeecceEEEEEEEecchhHHHhHHHhhhccC-CCChHHHHHHHHHHHH-
Q 044543 185 DPLKIDQSALTGESLPVTKMP--GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QEGHFQKVLTAIGNFC- 260 (962)
Q Consensus 185 ~~~~Vdes~LTGEs~pv~K~~--g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~l~~~~~~i~~~~- 260 (962)
+++.||||+|||||.++.|.+ +.++++||++.+|.+.++|+++|.+|..|+++.++.... .++++|-.+++++..+
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 457999999999999999999999999999999988774 8899999888876542
Q ss_pred --HHHHHHHHHHHHHHHhhccc-----c---c--------hHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCc
Q 044543 261 --ICSIAIGMVIEIIVMYPIQH-----R---A--------YRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 322 (962)
Q Consensus 261 --~~~i~~~~~~~~~~~~~~~~-----~---~--------~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~i 322 (962)
.+.++...++.++..|+... . . +.+.+..++.++++++|++||+++++++++++++|.++++
T Consensus 342 k~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 342 KIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 11222222222233333211 1 1 1122333455688899999999999999999999999999
Q ss_pred ccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccC--------CChH--HHHHHH-HHhcc-----------
Q 044543 323 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKD--------MDKD--TVILYG-ARASR----------- 380 (962)
Q Consensus 323 lvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~--------~~~~--~~l~~a-~~~~~----------- 380 (962)
++|+++|+|+||..++||+|||||||+|+|+|.+.++...... .++. +++..+ +.++.
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 9999999999999999999999999999999999776422111 1111 111111 11111
Q ss_pred --ccCCChHHHHHHHhh----cChhhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhcc------
Q 044543 381 --VENQDAIDACIVGML----GDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNL------ 448 (962)
Q Consensus 381 --~~~~~~~~~al~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~------ 448 (962)
...++|.|+|++++. .+.+..|...+.++++||||++|+|+++++.++|..+.++|||.|.+++.|..
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 112489999998876 35667788889999999999999999999988877349999999999999964
Q ss_pred -----chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCC-------C-CCCCCCCceEEEEeecCCCCCccHHHHHHHHHh
Q 044543 449 -----REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEK-------T-KESPGGPWQFVGLLPLFDPPRHDSAETIRRALN 515 (962)
Q Consensus 449 -----~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~-------~-~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~ 515 (962)
+++.+..+.+.++.||.+|||++|+||++..+. + .+..+.+++++|+++|+||+|||++++|+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 345566889999999999999999999984322 1 246788999999999999999999999999999
Q ss_pred CCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCE
Q 044543 516 LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHI 595 (962)
Q Consensus 516 aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~ 595 (962)
|||+|.|+||||..||++||.+|||.++......+.|.+. ..+++++.++++++.+|+||.+|.||+.+|+.|+++||+
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eF-r~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~V 740 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEF-RELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEV 740 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhh-hhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcE
Confidence 9999999999999999999999999887655556666554 488999999999999999999999999999999999999
Q ss_pred EEEEcCCcCChhhhhcCCeeEEcc-CchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 044543 596 CGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIV-LGF 673 (962)
Q Consensus 596 v~miGDG~ND~~aLk~AdVGIamg-~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~-l~~ 673 (962)
||++|||.||+||||+||||.||| .||++||++|||+|+||||++|++++.|||..|.||+||++|+++.|+..+ +.|
T Consensus 741 VAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~f 820 (1034)
T KOG0204|consen 741 VAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNF 820 (1034)
T ss_pred EEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhh
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999998544 445
Q ss_pred HHHHHhhcCCchHHHHHHHHHHhhhc-hhccccCCCCCC-------CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 674 LLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-------PVPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIH 745 (962)
Q Consensus 674 ~~~~~~~~~~~~p~~il~i~l~~~~~-~~~l~~d~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 745 (962)
......-..|+..+|+||+|+++|.+ +++++.|++.+. .+...+..+.+|...+.+++|+-++.+.+.+...
T Consensus 821 v~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~ 900 (1034)
T KOG0204|consen 821 VSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK 900 (1034)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 44445556899999999999999987 799999887443 3345566778899999999999998886554432
Q ss_pred hhccccccccccccC-CChhHHHHHHHHHHHHHHHHHHhhhccCC--CCcccchhHHHHHHHHHHHHHHHHHHHhhcccc
Q 044543 746 SSTFFSEKFGVRSIR-DSPHELTAAVYLQVSIVSQALIFVTRSRS--WSFLERPGLLLIAAFIIAQLVATLIAVYANFGF 822 (962)
Q Consensus 746 ~~~~~~~~~g~~~~~-~~~~~~~t~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 822 (962)
. . |+..+.. ....+..|++|-++++++.|+-++.|.-. -.|......+++++++...++..++.+...-.+
T Consensus 901 ~--i----f~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~~ 974 (1034)
T KOG0204|consen 901 S--I----FGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGAF 974 (1034)
T ss_pred h--h----hccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCcc
Confidence 1 1 2222211 12345669999999999999999999855 222222222344444444444444444433456
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 823 ARIHGIGWGWVGVIWLYSIVFYIPLDVLKFI 853 (962)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 853 (962)
+.+.+++|.-|++++.+.+..++.--+.|.+
T Consensus 975 ~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 975 FSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred eeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 7788899988888777776666655555543
No 13
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=9.4e-115 Score=1085.53 Aligned_cols=779 Identities=27% Similarity=0.376 Sum_probs=628.1
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHcC---CCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEEC
Q 044543 74 FLGFMWNPLSWVMEIAAIMAIALANG---GGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRD 150 (962)
Q Consensus 74 ~l~~~~~~~~~~l~~~ail~~~l~~~---~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rd 150 (962)
+++||++|++++|+++++++++++.. .....+|.++++|++++++++.+++++|++++++.++|++..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 47899999999999999999997532 222358999999999999999999999999999999999999999999999
Q ss_pred CeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCC-------------Ccccccceeec
Q 044543 151 GAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPG-------------DEVFSGSTCKQ 217 (962)
Q Consensus 151 g~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g-------------~~v~~Gs~v~~ 217 (962)
|++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.++ +++|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999997899999999999999999875 78999999999
Q ss_pred ceEEEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----cccch----HhHH
Q 044543 218 GEIEAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI-----QHRAY----RNGI 287 (962)
Q Consensus 218 G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-----~~~~~----~~~~ 287 (962)
|+++++|++||.+|++||++++++.. .+++++|+.+++++.++..++++++++.+++.... .+.+| ...+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999988776 47899999999998776544333222222221111 11122 2344
Q ss_pred HHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeee------
Q 044543 288 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEV------ 361 (962)
Q Consensus 288 ~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~------ 361 (962)
..++++++++||++||+++++++++++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 45678899999999999999999999999999999999999999999999999999999999999999876421
Q ss_pred --c---ccCCC-------------------hHHHHHHHHHhcccc------------CCChHHHHHHHhhcChh------
Q 044543 362 --F---VKDMD-------------------KDTVILYGARASRVE------------NQDAIDACIVGMLGDAK------ 399 (962)
Q Consensus 362 --~---~~~~~-------------------~~~~l~~a~~~~~~~------------~~~~~~~al~~~~~~~~------ 399 (962)
+ ..+++ .+.++..++.|+... .+||+|.|++.++.+..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 0 00000 123455556665321 25999999998753211
Q ss_pred --------------hhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhcc-----------chHHHH
Q 044543 400 --------------EARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNL-----------REDVRN 454 (962)
Q Consensus 400 --------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-----------~~~~~~ 454 (962)
..++.++.++.+||+|.+|||++++++ ++++..|+|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 124557789999999999999999875 467899999999999999963 134567
Q ss_pred HHHHHHHHHHh-cCCeEEEEEeecCCCCC----------CCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEE
Q 044543 455 KAHTIIDKFAD-RGLRSLAVAEQSVPEKT----------KESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 523 (962)
Q Consensus 455 ~~~~~i~~~a~-~GlR~L~~A~~~~~~~~----------~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mi 523 (962)
++.+++++|++ +|+|||++|||.+++++ .+..|++|+|+|+++++||||+|++++|++||++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986432 24568899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhCCCCCCCC--cccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcC
Q 044543 524 TGDQLAIAKETGRRLGMGTNMYP--SSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGD 601 (962)
Q Consensus 524 TGD~~~tA~~ia~~~Gi~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGD 601 (962)
|||+++||.++|+++|+..+... ...+.|.+. ..+++++..+...+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l-~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREF-DEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHH-hhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999754221 123455443 356667777888888999999999999999999999999999999
Q ss_pred CcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh
Q 044543 602 GVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIAL-IW 680 (962)
Q Consensus 602 G~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~-~~ 680 (962)
|+||+||||+||||||||+|+++|+++||+++.+|+|++|++++++||++|+|+++++.|.+++|+..++..+++.+ .+
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 718 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI 718 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987776666544 45
Q ss_pred cCCchHHHHHHHHHHhhhc-hhccccCCCCCCC---CC----CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccc
Q 044543 681 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPSP---VP----DTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSS-TFFS 751 (962)
Q Consensus 681 ~~~~~p~~il~i~l~~~~~-~~~l~~d~~~~~~---~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~ 751 (962)
+.||+|+|++|+|+++|++ +++++.+++++.. +| ++...+..+...++.|+++++++++.|++.+.. ++..
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 798 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTG 798 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 6799999999999999965 6889887765431 12 223334556666788999998877666554321 2111
Q ss_pred c--cc--ccc---cc----CCChhHHHHHHHHHHHHHHHHHHhhhccCCCCccc---chhHHHHHHHHHHHHHHHHHHHh
Q 044543 752 E--KF--GVR---SI----RDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLE---RPGLLLIAAFIIAQLVATLIAVY 817 (962)
Q Consensus 752 ~--~~--g~~---~~----~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~ 817 (962)
. .. +.. +. .....+.+|+.|.++++++.++.|+.|+++.+++. ..|.++++++++..++.. +.+|
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~-~~~~ 877 (917)
T TIGR01116 799 CDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHF-LILY 877 (917)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHH-HHHH
Confidence 0 00 000 00 00234567999999999999999999997654332 234566666665555443 3344
Q ss_pred hc--cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 818 AN--FGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVR 855 (962)
Q Consensus 818 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r 855 (962)
.+ -.++++.+++|..|++++.++++.++..+++|++.|
T Consensus 878 v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 878 VPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 43 235667888999999989999999999999997753
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=3.7e-111 Score=1066.19 Aligned_cols=752 Identities=22% Similarity=0.272 Sum_probs=592.9
Q ss_pred CCCCCHHHHHHHHhhcCCCccCccccchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHH
Q 044543 43 REGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTI 122 (962)
Q Consensus 43 ~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i 122 (962)
.+|||++|+++|+++||+|+++.+++++|+.|++++++|+++++++++++ |++. .+|++++.|+++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l-~~~~------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVIL-WLLD------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHH-HHhh------hhHHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999888999999999999998777666444 4433 3789999999999999999
Q ss_pred HHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEe--CCCeeecceEEEecCCeeEecccccCCCee
Q 044543 123 SFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIK--LGDIIPADARLLDGDPLKIDQSALTGESLP 200 (962)
Q Consensus 123 ~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~--~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~p 200 (962)
++++++++.++++++.. .++.++|+|||+|++|+++||||||+|.|+ +||+|||||+|++| +|.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccc
Confidence 99999999988888654 567999999999999999999999999999 99999999999999 699999999999999
Q ss_pred eecCCC------------------Ccccccceeec-------ceEEEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHH
Q 044543 201 VTKMPG------------------DEVFSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLT 254 (962)
Q Consensus 201 v~K~~g------------------~~v~~Gs~v~~-------G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~ 254 (962)
+.|.+. +++|+||.+.+ |.+.++|++||.+|..|++++.+... +..+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 25999999985 78999999999999999999988665 45677888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhc
Q 044543 255 AIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 334 (962)
Q Consensus 255 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg 334 (962)
++..+++++.+++.++ .++.+...+.++...+..++.+++++||++||++++++++.++.||+++|++||++.++|.+|
T Consensus 368 ~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIY-TIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 7665543322221111 111222235678888999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecccccccCCceEEEEEeeeecccC----------CChHHHHHHHHHhccc------cCCChHHHHHHHhhcCh
Q 044543 335 GMDVLCSDKTGTLTLNKLTVDKNLVEVFVKD----------MDKDTVILYGARASRV------ENQDAIDACIVGMLGDA 398 (962)
Q Consensus 335 ~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~----------~~~~~~l~~a~~~~~~------~~~~~~~~al~~~~~~~ 398 (962)
++|++|||||||||+|+|+|.+......... ......+...+.|+.. ..+||+|.|++.+.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999998754211000 1112233444445432 23699999999986421
Q ss_pred hhh-------------------hcCceEeeecCCCCCCceEEEEEEcCC-CCEEEEEeCcHHHHHHHhccchHHHHHHHH
Q 044543 399 KEA-------------------RAGITELHFLPFNPVEKRTAITYIDSD-GSWHRISKGAPEQIIELCNLREDVRNKAHT 458 (962)
Q Consensus 399 ~~~-------------------~~~~~~l~~~pF~s~~kr~sv~~~~~~-g~~~~~~KGa~e~il~~~~~~~~~~~~~~~ 458 (962)
.+. ...+++++.+||+|.+|||+++++..+ ++++.++|||||.|+++|+. +..++.+.+
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHH
Confidence 100 245788999999999999999998654 56789999999999999984 345778889
Q ss_pred HHHHHHhcCCeEEEEEeecCCCC--------CCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHH
Q 044543 459 IIDKFADRGLRSLAVAEQSVPEK--------TKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 530 (962)
Q Consensus 459 ~i~~~a~~GlR~L~~A~~~~~~~--------~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t 530 (962)
.+++|+++|+|||++|||++++. +++..|.+|+|+|+++|+||+|+|++++|++|+++||+|+|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998642 2356789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCc---------------------------------------------------ccccccchhc--
Q 044543 531 AKETGRRLGMGTNMYPS---------------------------------------------------SALLGQIKDA-- 557 (962)
Q Consensus 531 A~~ia~~~Gi~~~~~~~---------------------------------------------------~~l~~~~~~~-- 557 (962)
|.++|++|||.++.... .+++|...+.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 99999999997532100 0111211110
Q ss_pred cCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCC
Q 044543 558 NISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 637 (962)
Q Consensus 558 ~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~ 637 (962)
.+.++++++++.+..||||++|+||.++|+.||+.|++|+|||||+||+||||+||||||||++ ||+ .|||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 1233467778888999999999999999999999999999999999999999999999999865 555 79999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHhhhc-hhccccCCCCCC----C
Q 044543 638 LSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS----P 712 (962)
Q Consensus 638 ~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~~~~~~~p~~il~i~l~~~~~-~~~l~~d~~~~~----~ 712 (962)
|++|+++|++||+++.++++.+.|.+.+++..++..+. ....+.+++++|++|++++++.+ .++++.+++.+. +
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 99999999999999999999999999988866554433 23456889999999999999987 688888776432 2
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc-cCCChhHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 044543 713 VPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGVRS-IRDSPHELTAAVYLQVSIVSQALIFVTRSRSWS 791 (962)
Q Consensus 713 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~ 791 (962)
++.+...+..+...+.+++++.++.+..|++.....|+........ .........|++| .++.++++..+..++.+..
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~p 1001 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPP 1001 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcc
Confidence 2344444566666677788888888877766655444321111000 0011233467777 5666677777777776533
Q ss_pred cccc--hhHHHHHHHHHHHH
Q 044543 792 FLER--PGLLLIAAFIIAQL 809 (962)
Q Consensus 792 ~~~~--~~~~l~~~~~~~~~ 809 (962)
|... .|.+++++++++.+
T Consensus 1002 f~~~~~~N~~~~~~~~~~~~ 1021 (1054)
T TIGR01657 1002 FREPIYKNKPFVYLLITGLG 1021 (1054)
T ss_pred hhhhHHHhHHHHHHHHHHHH
Confidence 3211 23345555554433
No 15
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-115 Score=990.24 Aligned_cols=845 Identities=24% Similarity=0.405 Sum_probs=697.6
Q ss_pred CCCCChhhhhhc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHH
Q 044543 12 NNGISLEEIKKE-NVDLERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEI 88 (962)
Q Consensus 12 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~ 88 (962)
+++.++++.++| .+|.|++|.+|+++++.++ .+|||.+++.+++.+-|+|.++++| .+.|.+|++|+++.+.+++++
T Consensus 23 ~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~ 102 (1019)
T KOG0203|consen 23 KKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWI 102 (1019)
T ss_pred chhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHH
Confidence 355578999999 8999999999999999998 7899999999999999999998776 567999999999999999999
Q ss_pred HHHHHHHHHcC-----CCCCCC-hhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcC
Q 044543 89 AAIMAIALANG-----GGKPPD-WQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILV 162 (962)
Q Consensus 89 ~ail~~~l~~~-----~~~~~~-~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv 162 (962)
+|+++++.+.. ..+..+ -+-+.++..++++..+..++|+.+..+-+++++++.|+.+.|+|||+...+.+++||
T Consensus 103 ~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelV 182 (1019)
T KOG0203|consen 103 GAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELV 182 (1019)
T ss_pred HHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcc
Confidence 99999874321 111122 233444556667788899999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCC----------CCcccccceeecceEEEEEEEecchhH
Q 044543 163 PGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMP----------GDEVFSGSTCKQGEIEAVVIATGVHTF 232 (962)
Q Consensus 163 ~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~----------g~~v~~Gs~v~~G~~~~~V~~tG~~T~ 232 (962)
|||+|.++-||+||||.|++++..+++|+|+|||||.|..+.+ .|+.|.+|.+.+|.++++|++||.+|.
T Consensus 183 vGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv 262 (1019)
T KOG0203|consen 183 VGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTV 262 (1019)
T ss_pred cccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceE
Confidence 9999999999999999999999999999999999999999987 367899999999999999999999999
Q ss_pred HHhHHHhhhc-cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHH
Q 044543 233 FGKAAHLVDS-TNQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMA 311 (962)
Q Consensus 233 ~gki~~l~~~-~~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~ 311 (962)
+|+++.+... ...++++++.++.+..+.....++ +.++++..-...+..|..++.+++.++++.+|++|+..++++++
T Consensus 263 ~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~-~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Lt 341 (1019)
T KOG0203|consen 263 MGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIF-LGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLT 341 (1019)
T ss_pred EeehhhhhccCCCCCCcchhhhhchHHHHHHHHHH-HHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHH
Confidence 9999998865 467889999888887664332222 22222222222367888888889999999999999999999999
Q ss_pred HHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeeccc----------------CCChHHHHHHH
Q 044543 312 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVK----------------DMDKDTVILYG 375 (962)
Q Consensus 312 ~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~----------------~~~~~~~l~~a 375 (962)
.-++||+++++++|++.++|+||..++||+|||||||+|+|+|.+.+.+.... +..-..++..+
T Consensus 342 ltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~ 421 (1019)
T KOG0203|consen 342 LTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIA 421 (1019)
T ss_pred HHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999876431110 11113456667
Q ss_pred HHhccc---------------cCCChHHHHHHHhh----cChhhhhcCceEeeecCCCCCCceEEEEEEcCC---CCEEE
Q 044543 376 ARASRV---------------ENQDAIDACIVGML----GDAKEARAGITELHFLPFNPVEKRTAITYIDSD---GSWHR 433 (962)
Q Consensus 376 ~~~~~~---------------~~~~~~~~al~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~---g~~~~ 433 (962)
..|++. ..+|+.|.|++++. ++..+.|+..+.+..+||||.+|+.-.+....+ .+..+
T Consensus 422 ~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l 501 (1019)
T KOG0203|consen 422 TLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLL 501 (1019)
T ss_pred HHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCcccee
Confidence 766643 23588999998875 455677888888999999999999887776544 57789
Q ss_pred EEeCcHHHHHHHhcc----------chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC-----------CCCCCCceE
Q 044543 434 ISKGAPEQIIELCNL----------REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK-----------ESPGGPWQF 492 (962)
Q Consensus 434 ~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~-----------~~~e~~l~l 492 (962)
..|||||.++++|+. ++...+.+++..+++...|-||++++++.++++++ .-...+|.|
T Consensus 502 ~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~F 581 (1019)
T KOG0203|consen 502 VMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRF 581 (1019)
T ss_pred eecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccc
Confidence 999999999999973 45667888889999999999999999999886542 234568999
Q ss_pred EEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC------------c----------ccc
Q 044543 493 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP------------S----------SAL 550 (962)
Q Consensus 493 lG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~------------~----------~~l 550 (962)
+|++++-||||..+|+++.+||.|||||+|+|||++.||+++|++.||..+... . .++
T Consensus 582 lGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~Vi 661 (1019)
T KOG0203|consen 582 LGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVI 661 (1019)
T ss_pred cchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEE
Confidence 999999999999999999999999999999999999999999999997653211 0 112
Q ss_pred cccchhccCCcchHHHHhhhcc--eEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc-CchHHHHh
Q 044543 551 LGQIKDANISALPVDELIEKAD--GFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARG 627 (962)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~--v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg-~gt~~a~~ 627 (962)
.|.++ ..++.+++++++.+.. ||||.||+||..||+..|++|.+|+++|||+||+||||+|||||||| .|+|++|+
T Consensus 662 hG~eL-~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKq 740 (1019)
T KOG0203|consen 662 HGSEL-PDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ 740 (1019)
T ss_pred ecccc-cccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHh
Confidence 33322 3677889999998665 99999999999999999999999999999999999999999999999 99999999
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcCCchHHHHHHHHHHhhhc-hhcccc
Q 044543 628 ASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI-ALIWKFDFSPFMVLIIAILNDGT-IMTISK 705 (962)
Q Consensus 628 aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~-~~~~~~~~~p~~il~i~l~~~~~-~~~l~~ 705 (962)
|||++|+||||++|+..|++||-+|+|+||.+.|.++.|++.+..++.+ .+..|.|+.++++|.|.+.+|++ +++++|
T Consensus 741 AADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAY 820 (1019)
T KOG0203|consen 741 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAY 820 (1019)
T ss_pred hcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhc
Confidence 9999999999999999999999999999999999999999877665554 55689999999999999999986 699999
Q ss_pred CCCCCC--------CCCCccchHHHHH-HHHHHHHHHHHHHHHHHHH-HHhhccccccc----------cccccCCCh--
Q 044543 706 DRVKPS--------PVPDTWKLKEIFA-TGIVLGTYLAVMTVLFFWA-IHSSTFFSEKF----------GVRSIRDSP-- 763 (962)
Q Consensus 706 d~~~~~--------~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~----------g~~~~~~~~-- 763 (962)
+..... |+.++.-..+++. .++..|+++++.+|+.|+. +...+|++... +++++.+++
T Consensus 821 E~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQ 900 (1019)
T KOG0203|consen 821 EKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQ 900 (1019)
T ss_pred cCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccc
Confidence 875322 2234443344444 4577899999999976655 55567766321 123333332
Q ss_pred -----------hHHHHHHHHHHHHHHHHHHhhhccCCCC--cccchhHHHHHHHHHHHHHHHHHHHhhc-cccccccchh
Q 044543 764 -----------HELTAAVYLQVSIVSQALIFVTRSRSWS--FLERPGLLLIAAFIIAQLVATLIAVYAN-FGFARIHGIG 829 (962)
Q Consensus 764 -----------~~~~t~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 829 (962)
.+.+|++|.++++.|.+..+.+.+++-+ -....|+.+++++++-.+++.++++-.. ...+++.++.
T Consensus 901 eWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~ 980 (1019)
T KOG0203|consen 901 EWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLK 980 (1019)
T ss_pred cccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCC
Confidence 2256888999999999887777776644 4466788999999888887777654322 2234678889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 044543 830 WGWVGVIWLYSIVFYIPLDVLKFIVRYAL 858 (962)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~K~~~r~~~ 858 (962)
|.||++.++++++.++.+|+.|+++|.+.
T Consensus 981 ~~~wl~a~P~~ilIfvydE~Rk~~IR~~P 1009 (1019)
T KOG0203|consen 981 FQWWLVAFPFGILIFVYDEVRKLFIRRYP 1009 (1019)
T ss_pred cEEEEecccceeeeeeHHHHHhHhhhhCC
Confidence 99999999999999999999999999886
No 16
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.6e-104 Score=1008.58 Aligned_cols=787 Identities=18% Similarity=0.242 Sum_probs=589.0
Q ss_pred cCCCccCccccchH----HHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhH
Q 044543 58 FGPNKLEEKKESKV----LKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNA 133 (962)
Q Consensus 58 ~G~N~i~~~~~~~~----~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~ 133 (962)
|..|.+.+.||++| +.|++||.++++++|+++++++++.. ..+...+...++++++++++++.+++|+++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~--~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPI--LSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCC--cCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999999876 78999999999999999999999832 2333345566677778889999999999999999
Q ss_pred HHHhhcCCCCeEEEEEC-CeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCC----eeEecccccCCCeeeecCCC--
Q 044543 134 AAALMAGLAPQTKVLRD-GAWREQEASILVPGDVISIKLGDIIPADARLLDGDP----LKIDQSALTGESLPVTKMPG-- 206 (962)
Q Consensus 134 ~~~l~~~~~~~~~V~Rd-g~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~----~~Vdes~LTGEs~pv~K~~g-- 206 (962)
+++.+ .+.++|+|+ |++++++|+||+|||+|.|++||+||||++|+++++ |+||||+|||||+|+.|.+.
T Consensus 79 d~~~n---~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEVN---NRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHHh---CcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 87654 589999997 899999999999999999999999999999998654 99999999999999998641
Q ss_pred ----------------------------------------------Ccccccceeec-ceEEEEEEEecchhHHHhHHHh
Q 044543 207 ----------------------------------------------DEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 239 (962)
Q Consensus 207 ----------------------------------------------~~v~~Gs~v~~-G~~~~~V~~tG~~T~~gki~~l 239 (962)
|.+|+||.+++ |+++|+|++||.+|++++...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~- 234 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNAT- 234 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCC-
Confidence 46899999999 899999999999998875321
Q ss_pred hhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc----cch---------------HhHHHHHHHHHHhccCC
Q 044543 240 VDSTNQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQH----RAY---------------RNGIDNLLVLLIGGIPI 300 (962)
Q Consensus 240 ~~~~~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~l~lli~~iP~ 300 (962)
....+.+++++.++++..+++++.++++++..++.+.... ..| ...+..+++++..++|+
T Consensus 235 -~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 235 -QAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred -CCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 2234789999999999877655444433333333222111 011 12566788999999999
Q ss_pred chHHHHHHHHHHHH------HHHhcC----CcccccCchHHhhcCceEEEecccccccCCceEEEEEeeee--cccCC--
Q 044543 301 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEV--FVKDM-- 366 (962)
Q Consensus 301 aL~~~~~i~~~~~~------~~l~~~----~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~~~~-- 366 (962)
+||+++++++++++ .+|.++ ++++|+++++|+||+|++||+|||||||+|+|+++++.+.. |..+.
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999 788864 59999999999999999999999999999999999997631 11000
Q ss_pred -----------------------------C----------------hHHHHHHHHHhccc--------------cCCChH
Q 044543 367 -----------------------------D----------------KDTVILYGARASRV--------------ENQDAI 387 (962)
Q Consensus 367 -----------------------------~----------------~~~~l~~a~~~~~~--------------~~~~~~ 387 (962)
+ ..+++..++.|+.. ..++|+
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 02344455555432 125899
Q ss_pred HHHHHHhhcChh------------------hhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhcc-
Q 044543 388 DACIVGMLGDAK------------------EARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNL- 448 (962)
Q Consensus 388 ~~al~~~~~~~~------------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~- 448 (962)
|.|++.++...+ .....|++++.+||+|.|||||+++++++|++++++|||||.|+++|..
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 999998764221 1224688899999999999999999998888999999999999999974
Q ss_pred chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC-------------------------CCCCCCceEEEEeecCCCCC
Q 044543 449 REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK-------------------------ESPGGPWQFVGLLPLFDPPR 503 (962)
Q Consensus 449 ~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~-------------------------~~~e~~l~llG~i~i~D~lr 503 (962)
+++.++.+.+++++|+.+|+|||++|||.+++++. +.+|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 34567788999999999999999999999876421 34689999999999999999
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcc-----------------------------------
Q 044543 504 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS----------------------------------- 548 (962)
Q Consensus 504 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~----------------------------------- 548 (962)
+|++++|+.|++|||+|||+|||+++||++||++|||.++.....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 999999999999999999999999999999999999976432111
Q ss_pred ----cccccchhccCCc---chHHHHhhhcc--eEEecCHhhHHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCeeEEc
Q 044543 549 ----ALLGQIKDANISA---LPVDELIEKAD--GFAGVFPEHKYEIVRKLQER-KHICGMTGDGVNDAPALKKADIGIAV 618 (962)
Q Consensus 549 ----~l~~~~~~~~~~~---~~~~~~~~~~~--v~arvsP~qK~~iV~~lq~~-g~~v~miGDG~ND~~aLk~AdVGIam 618 (962)
++.|...+..+++ ..+.+++..++ ||||++|+||+++|+.+|+. |++|+|||||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 2223222211111 12334454454 99999999999999999998 99999999999999999999999998
Q ss_pred -c-CchHHHHhcccccccCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CchHHHHHH
Q 044543 619 -A-DATDAARGASDIVLTEPGLSVIVSAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWKF----DFSPFMVLI 691 (962)
Q Consensus 619 -g-~gt~~a~~aaDivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~~~~----~~~p~~il~ 691 (962)
| +|.+ |+.+||+++.+ |+.+..++ .+||++|+|+++++.|.+++|+.+++..+++.++.+| ++.+++++|
T Consensus 794 ~g~eg~q-A~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 870 (1057)
T TIGR01652 794 SGKEGMQ-AVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVL 870 (1057)
T ss_pred cChHHHH-HHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 4 4555 55699999964 99999988 8899999999999999999999888888887776543 588889999
Q ss_pred HHHHhhhc-hhcccc-CCCCCC----CCCC---------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Q 044543 692 IAILNDGT-IMTISK-DRVKPS----PVPD---------TWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGV 756 (962)
Q Consensus 692 i~l~~~~~-~~~l~~-d~~~~~----~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 756 (962)
+|++++.+ +++++. |+..+. ..|. .++.+. |...++.|++++++++++.++.+...... .
T Consensus 871 ~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~-f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~--- 945 (1057)
T TIGR01652 871 YNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKT-FWGWMLDGIYQSLVIFFFPMFAYILGDFV-S--- 945 (1057)
T ss_pred HHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCccc-c---
Confidence 99999876 577764 332211 1121 223334 44446789999998886655444321111 1
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHH-HhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHHhh-c---cccccccchhHH
Q 044543 757 RSIRDSPHELTAAVYLQVSIVSQAL-IFVTRSRSWSFLERPGLLLIAAFIIAQLVATLIAVYA-N---FGFARIHGIGWG 831 (962)
Q Consensus 757 ~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~ 831 (962)
.+...+.....+++|+.+.+..++. .+.++ +|+|......| +++++..++..++..+. . ++.+......+.
T Consensus 946 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~wt~~~~~~~~--~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 1021 (1057)
T TIGR01652 946 SGSLDDFSSVGVIVFTALVVIVNLKIALEIN--RWNWISLITIW--GSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFG 1021 (1057)
T ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHHHHh--HhHHHHHHHHH--HHHHHHHHHHHHHHhhcccccHHHHHHHHHccHH
Confidence 1122245667778888877777665 34444 44432222111 11111111111111110 0 011111112455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhh
Q 044543 832 WVGVIWLYSIVFYIPLDVLKFIVRYALTGKAWD 864 (962)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~ 864 (962)
+|+.+++..+++++|+.++|++.|.+.| ..++
T Consensus 1022 f~l~~ll~~~~~l~p~~~~~~~~~~~~P-~~~~ 1053 (1057)
T TIGR01652 1022 FWLVLLVIVLISLLPRFTYKAIQRLFRP-PDYD 1053 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC-CHHH
Confidence 7777788888889999999998887775 4443
No 17
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=5.8e-102 Score=974.89 Aligned_cols=785 Identities=16% Similarity=0.175 Sum_probs=580.1
Q ss_pred hhcCCCccCccccchH----HHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh
Q 044543 56 VIFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAG 131 (962)
Q Consensus 56 ~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~ 131 (962)
.+|..|.+.+.||++| +.+++||.++.|++|++++|++++. ...+...+...++++++++++++.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip--~~s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLP--QLAVFGRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCC--CcccCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3699999999999876 7889999999999999999999873 233344667788899999999999999999999
Q ss_pred hHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCC----eeEecccccCCCeeeecCCC-
Q 044543 132 NAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDP----LKIDQSALTGESLPVTKMPG- 206 (962)
Q Consensus 132 ~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~----~~Vdes~LTGEs~pv~K~~g- 206 (962)
+++++.+ +.+++|+|+|++++++|++|+|||+|.|++||+||||++|+++++ |+||||+|||||+|+.|.++
T Consensus 163 k~d~~~N---~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIEN---NRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhhc---CcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 9987754 578999999999999999999999999999999999999998543 89999999999999999742
Q ss_pred --------------------------------------------Ccccccceeecc-eEEEEEEEecchhHHHhHHHhhh
Q 044543 207 --------------------------------------------DEVFSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 241 (962)
Q Consensus 207 --------------------------------------------~~v~~Gs~v~~G-~~~~~V~~tG~~T~~gki~~l~~ 241 (962)
+.+++||.+++. +++|+|++||.+|+... +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 457788888887 69999999999997422 1111
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhccc-c---------------------c---h----HhHHHHH
Q 044543 242 STNQEGHFQKVLTAIGNFCICSIAIGMVIEIIVM--YPIQH-R---------------------A---Y----RNGIDNL 290 (962)
Q Consensus 242 ~~~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~--~~~~~-~---------------------~---~----~~~~~~~ 290 (962)
...|.+++++.+|++..+++++.+++++++.++. |.... . + + ...+..+
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 1247899999999988775544443333332222 11100 0 0 0 1123334
Q ss_pred HHHHHhccCCchHHHHHHHHHHHHHHHhcCC----------cccccCchHHhhcCceEEEecccccccCCceEEEEEeee
Q 044543 291 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVE 360 (962)
Q Consensus 291 l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~----------ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~ 360 (962)
++++..+||++|++++++++..++.++.++. +.||+.+.+|+||+|++||+|||||||+|+|++++|.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 5777799999999999999998898887655 789999999999999999999999999999999999873
Q ss_pred e--ccc-----------------C----------C------------C-h-----HHHHHHHHHhccc------------
Q 044543 361 V--FVK-----------------D----------M------------D-K-----DTVILYGARASRV------------ 381 (962)
Q Consensus 361 ~--~~~-----------------~----------~------------~-~-----~~~l~~a~~~~~~------------ 381 (962)
. |.. + . + + .+++...+.|+..
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 1 110 0 0 0 0 1245555555532
Q ss_pred ------cCCChHHHHHHHhhcCh----------------hhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcH
Q 044543 382 ------ENQDAIDACIVGMLGDA----------------KEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAP 439 (962)
Q Consensus 382 ------~~~~~~~~al~~~~~~~----------------~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~ 439 (962)
...+|+|.|++.++.+. ...+..|++++.+||+|+|||||+++++++|++.+++||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 11379999999987532 23456789999999999999999999988899999999999
Q ss_pred HHHHHHhccc--hHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC-------------------------CCCCCCceE
Q 044543 440 EQIIELCNLR--EDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK-------------------------ESPGGPWQF 492 (962)
Q Consensus 440 e~il~~~~~~--~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~-------------------------~~~e~~l~l 492 (962)
|.|+++|+.. ++.++++.+++++|+++|+|||++|||.++++++ +.+|++|++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999742 4567788999999999999999999999976432 346899999
Q ss_pred EEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccc----------------------
Q 044543 493 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL---------------------- 550 (962)
Q Consensus 493 lG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l---------------------- 550 (962)
+|+++++||||+|++++|++|+++||+|||+|||+.+||++||++|||.++......+
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 9999999999999999999999999999999999999999999999997654321111
Q ss_pred -------------------------cccchhccCC---cchHHHHhhhcc--eEEecCHhhHHHHHHHHhhC-CCEEEEE
Q 044543 551 -------------------------LGQIKDANIS---ALPVDELIEKAD--GFAGVFPEHKYEIVRKLQER-KHICGMT 599 (962)
Q Consensus 551 -------------------------~~~~~~~~~~---~~~~~~~~~~~~--v~arvsP~qK~~iV~~lq~~-g~~v~mi 599 (962)
.|...+..++ .+.+.++..++. ||||++|+||+++|+.+|++ +++|+||
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 1111110011 123444555554 79999999999999999997 6899999
Q ss_pred cCCcCChhhhhcCCeeEEc-c-CchHHHHhcccccccCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 600 GDGVNDAPALKKADIGIAV-A-DATDAARGASDIVLTEPGLSVIVSAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFLLI 676 (962)
Q Consensus 600 GDG~ND~~aLk~AdVGIam-g-~gt~~a~~aaDivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~ 676 (962)
|||+||+||||+|||||++ | +|.+|++ |||+++.+ |..+..++ .|||++|+|+.+.+.|.+++|+.+++..+++
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~qA~~-aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f 954 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQAVM-ASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWY 954 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHHHHH-hhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 5 7888777 99999955 66676665 5799999999999999999999999999999
Q ss_pred HHhhcCC----chHHHHHHHHHHhhhc-hhccc-cCCCCCC-------------CCCCccchHHHHHHHHHHHHHHHHHH
Q 044543 677 ALIWKFD----FSPFMVLIIAILNDGT-IMTIS-KDRVKPS-------------PVPDTWKLKEIFATGIVLGTYLAVMT 737 (962)
Q Consensus 677 ~~~~~~~----~~p~~il~i~l~~~~~-~~~l~-~d~~~~~-------------~~~~~~~~~~~~~~~~~~g~~~~~~~ 737 (962)
.++.+|. |.++.+.++|++++.+ ++.++ +|+..+. .+...++.+. |+..++.|++++++.
T Consensus 955 ~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~-F~~w~~~~i~qs~ii 1033 (1178)
T PLN03190 955 VLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKL-FWLTMIDTLWQSAVV 1033 (1178)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHH-HHHHHHHHHHHHHHH
Confidence 9888774 6677788888776654 56664 4554332 1122334444 444577799999988
Q ss_pred HHHHHHHHhhccccccccccccCCChhHHHHHHHHHHHHHHHHH-HhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHH
Q 044543 738 VLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQAL-IFVTRSRSWSFLERPGLLLIAAFIIAQLVATLIAV 816 (962)
Q Consensus 738 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 816 (962)
|++.++.+.... .+ .....+++++.++++.++. ++.+++ |+|......| +++++..++..++..
T Consensus 1034 ff~~~~~~~~~~----~~-------~~~~~~~~~~~~v~~vnl~i~~~~~~--wt~~~~~~i~--~Si~~~~i~~~~~~~ 1098 (1178)
T PLN03190 1034 FFVPLFAYWAST----ID-------GSSIGDLWTLAVVILVNLHLAMDIIR--WNWITHAAIW--GSIVATFICVIVIDA 1098 (1178)
T ss_pred HHHHHHHhcCCC----cC-------ceeEhHhhhhHHHHHHHHHHHHHHhh--hhHHHHHHHH--HHHHHHHHHHHHHHh
Confidence 866555442211 11 0112234444444444443 344444 4433222111 111111111111100
Q ss_pred ---hhc-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhh
Q 044543 817 ---YAN-FGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRYALTGKAWDNLLE 868 (962)
Q Consensus 817 ---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~ 868 (962)
+.. +.+..+ ...+.+|+.+++..+++++|+.++|++.|.+.| ..++.+++
T Consensus 1099 ~~~~~~~~~~~~~-~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P-~~~~~~~~ 1152 (1178)
T PLN03190 1099 IPTLPGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTP-CDVQIARE 1152 (1178)
T ss_pred cccchhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CHHHHHHH
Confidence 000 111111 124557777788888899999999998888876 44554443
No 18
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.8e-94 Score=857.23 Aligned_cols=545 Identities=23% Similarity=0.369 Sum_probs=452.4
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHcCCC--CCCCh--hhHHHHHHHHHHHHHHHHHH----HHhhhhHHHHhhcCCCC-eEE
Q 044543 76 GFMWNPLSWVMEIAAIMAIALANGGG--KPPDW--QDFVGIVVLLLINSTISFIE----ENNAGNAAAALMAGLAP-QTK 146 (962)
Q Consensus 76 ~~~~~~~~~~l~~~ail~~~l~~~~~--~~~~~--~~~~~i~~~~~i~~~i~~~~----e~~~~~~~~~l~~~~~~-~~~ 146 (962)
.+++||+.|+++++++++++++.... ....| .+.+.|.++++++.+++.++ |+|+++++++|++..++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 46899999999999999998763210 11122 45667777777787777776 78999999999998886 776
Q ss_pred -EEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCC---CcccccceeecceEEE
Q 044543 147 -VLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPG---DEVFSGSTCKQGEIEA 222 (962)
Q Consensus 147 -V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g---~~v~~Gs~v~~G~~~~ 222 (962)
|.|||++++|++++|+|||+|.|++||+|||||+|++| ...||||+|||||.|+.|++| +.+|+||.+.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 77999999999999999999999999999999999999 469999999999999999999 8899999999999999
Q ss_pred EEEEecchhHHHhHHHhhhccC-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccchHhHHHHHHHHHHhccCC
Q 044543 223 VVIATGVHTFFGKAAHLVDSTN-QEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI-QHRAYRNGIDNLLVLLIGGIPI 300 (962)
Q Consensus 223 ~V~~tG~~T~~gki~~l~~~~~-~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~l~lli~~iP~ 300 (962)
+|+++|.+|++||+++++++++ +++|+|..+..+...+.+ ++++++ +..+.. ....+...+...+++++++|||
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i--i~l~~~--~~~~~~~~~~~~~~~~~~~val~V~~IP~ 262 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI--IFLVVI--LTMYPLAKFLNFNLSIAMLIALAVCLIPT 262 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH--HHHHHH--HHHHHHHhhccHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999998874 788888766554332211 111111 111111 1123444567778888899999
Q ss_pred chHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhcc
Q 044543 301 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASR 380 (962)
Q Consensus 301 aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~ 380 (962)
+||..++++.+.|+.+|+++|+++|+++++|+||++|++|||||||||+|++.+.+... ..+.+.++++..++.++.
T Consensus 263 aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~ 339 (673)
T PRK14010 263 TIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSI 339 (673)
T ss_pred hHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999998776665431 224456677777777765
Q ss_pred ccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccc-hHHHHHHHHH
Q 044543 381 VENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLR-EDVRNKAHTI 459 (962)
Q Consensus 381 ~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~~~ 459 (962)
. ..||++.|++.++...... ......++.||++.+|+|++.+ +|+ .+.||+++.++++|... ...+..+.+.
T Consensus 340 ~-s~~P~~~AIv~~a~~~~~~-~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~ 412 (673)
T PRK14010 340 A-DDTPEGRSIVKLAYKQHID-LPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDAL 412 (673)
T ss_pred C-CCChHHHHHHHHHHHcCCC-chhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHH
Confidence 4 4599999999877532110 0111235689999999999864 243 56699999999999742 1223446667
Q ss_pred HHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhC
Q 044543 460 IDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 539 (962)
Q Consensus 460 i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~G 539 (962)
+++++++|+|+++++. +++++|+++++||+|+|++++|++||++||+++|+||||+.||.++|+++|
T Consensus 413 ~~~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elG 479 (673)
T PRK14010 413 VKGVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG 479 (673)
T ss_pred HHHHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 7889999999999874 348999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc
Q 044543 540 MGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA 619 (962)
Q Consensus 540 i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg 619 (962)
|. ++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||||
T Consensus 480 I~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg 529 (673)
T PRK14010 480 VD------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN 529 (673)
T ss_pred Cc------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC
Confidence 84 379999999999999999999999999999999999999999999999
Q ss_pred CchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 620 DATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIAL 678 (962)
Q Consensus 620 ~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~ 678 (962)
+|+|+||++||+||++|+|++|++++++||++|.|+++++.|.++.|++.++..+...|
T Consensus 530 sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 530 SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987766554444
No 19
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=4.8e-97 Score=898.34 Aligned_cols=786 Identities=18% Similarity=0.221 Sum_probs=598.3
Q ss_pred HHhhcCCCccCccccchH----HHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 044543 54 RLVIFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENN 129 (962)
Q Consensus 54 r~~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~ 129 (962)
+...|-.|.+.+.||+++ +++++||.++.|++|++.++++++. .++...|...+++++++.++++.+.+|+++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip---~~~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP---LSPFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc---ccccCccceeeceeeeehHHHHHHHHhhhh
Confidence 555899999999999875 7899999999999999999999984 335668888999999999999999999999
Q ss_pred hhhHHHHhhcCCCCeEEEEECCe-EEEEECcCcCCCcEEEEeCCCeeecceEEEecCC----eeEecccccCCCeeeecC
Q 044543 130 AGNAAAALMAGLAPQTKVLRDGA-WREQEASILVPGDVISIKLGDIIPADARLLDGDP----LKIDQSALTGESLPVTKM 204 (962)
Q Consensus 130 ~~~~~~~l~~~~~~~~~V~Rdg~-~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~----~~Vdes~LTGEs~pv~K~ 204 (962)
+++.+..++ ..++.|.|++. +++..|++|+|||+|.+..++.+|||.+|+++++ |+|++++|+||++++.|+
T Consensus 105 R~~~D~~iN---~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEVN---NRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHhh---cceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 999987655 57899998644 8999999999999999999999999999998754 999999999999999886
Q ss_pred C-----------------------------------------------CCcccccceeecce-EEEEEEEecchhHHHhH
Q 044543 205 P-----------------------------------------------GDEVFSGSTCKQGE-IEAVVIATGVHTFFGKA 236 (962)
Q Consensus 205 ~-----------------------------------------------g~~v~~Gs~v~~G~-~~~~V~~tG~~T~~gki 236 (962)
. .+++++|+++++++ ++|+|++||++|++++.
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 4 13578999999975 89999999999987653
Q ss_pred HHhhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-------------c-----chHhHHHHHHHHHHhcc
Q 044543 237 AHLVDSTNQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQH-------------R-----AYRNGIDNLLVLLIGGI 298 (962)
Q Consensus 237 ~~l~~~~~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~-------------~-----~~~~~~~~~l~lli~~i 298 (962)
... ...+++.+++.++.+...+++++++.+++..+....... . .....+..+++++...+
T Consensus 262 ~~~--~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 SGK--PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred cCC--CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 322 335788899999988766555444433333322211110 0 11224566788899999
Q ss_pred CCchHHHHHHHHHHHHHHHh----------cCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCC--
Q 044543 299 PIAMPTVLSVTMAIGSHRLS----------QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDM-- 366 (962)
Q Consensus 299 P~aL~~~~~i~~~~~~~~l~----------~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~-- 366 (962)
|++|++++++...+++.... ...+.+|+.+..|+||+|++|++|||||||+|.|++++|.++....+.
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 99999999999999984433 457899999999999999999999999999999999999985322110
Q ss_pred C------------------------------------------hHHHHHHHHHhccc-------------cCCChHHHHH
Q 044543 367 D------------------------------------------KDTVILYGARASRV-------------ENQDAIDACI 391 (962)
Q Consensus 367 ~------------------------------------------~~~~l~~a~~~~~~-------------~~~~~~~~al 391 (962)
+ ..++....+.|+.. +.++|+|.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 0 01233444444421 2257999999
Q ss_pred HHhhcChhh----------------hhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhc-cchHHHH
Q 044543 392 VGMLGDAKE----------------ARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCN-LREDVRN 454 (962)
Q Consensus 392 ~~~~~~~~~----------------~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~-~~~~~~~ 454 (962)
+.++++..- ....|+.++.+||+|+||||||++++++|+..++||||+.+|++++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 998753211 24589999999999999999999999999999999999999999998 5567888
Q ss_pred HHHHHHHHHHhcCCeEEEEEeecCCCCC-------------------------CCCCCCCceEEEEeecCCCCCccHHHH
Q 044543 455 KAHTIIDKFADRGLRSLAVAEQSVPEKT-------------------------KESPGGPWQFVGLLPLFDPPRHDSAET 509 (962)
Q Consensus 455 ~~~~~i~~~a~~GlR~L~~A~~~~~~~~-------------------------~~~~e~~l~llG~i~i~D~lr~~~~~~ 509 (962)
+..+++++||.+||||||+|||++++++ ++.+|++|+++|.+++||++|+||||+
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 9999999999999999999999999865 256799999999999999999999999
Q ss_pred HHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccc-------------------------------------
Q 044543 510 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLG------------------------------------- 552 (962)
Q Consensus 510 I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~------------------------------------- 552 (962)
|+.|++||||+||+|||+.+||++||.+|++..+.+....+..
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 9999999999999999999999999999999876443222211
Q ss_pred --------cchhccCCcchHHHH-----hhhcceEEecCHhhHHHHHHHHhh-CCCEEEEEcCCcCChhhhhcCCeeEEc
Q 044543 553 --------QIKDANISALPVDEL-----IEKADGFAGVFPEHKYEIVRKLQE-RKHICGMTGDGVNDAPALKKADIGIAV 618 (962)
Q Consensus 553 --------~~~~~~~~~~~~~~~-----~~~~~v~arvsP~qK~~iV~~lq~-~g~~v~miGDG~ND~~aLk~AdVGIam 618 (962)
......++++..... -+++.+|||++|.||+.+|+..++ .+.++++||||+||++|+++|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 111111111111111 135679999999999999999985 489999999999999999999999999
Q ss_pred c--CchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC----chHHHHHHH
Q 044543 619 A--DATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWKFD----FSPFMVLII 692 (962)
Q Consensus 619 g--~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~~~~~----~~p~~il~i 692 (962)
+ +|.+|++ +||+.+.+++|.....++| |||.|.|+.+++.|.+++|+.+.+..+++.++.+|. +.++++.++
T Consensus 820 sG~EGmQAvm-sSD~AIaqFrfL~rLLLVH-GhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~ly 897 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQFRFLERLLLVH-GHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLY 897 (1151)
T ss_pred ccchhhhhhh-cccchHHHHHHHhhhheee-cceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEE
Confidence 4 7888887 9999998887776665555 999999999999999999999999999999998874 566677777
Q ss_pred HHHhhh-chhcccc-CCCCCC------C-------CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc
Q 044543 693 AILNDG-TIMTISK-DRVKPS------P-------VPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGVR 757 (962)
Q Consensus 693 ~l~~~~-~~~~l~~-d~~~~~------~-------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 757 (962)
|++.+. +++.+|. |+..+. | ....++.+ .|+..++.|+++++++|++++..+... . .+.+
T Consensus 898 Nv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~-~f~~~~~~g~~~sli~Ff~~~~~~~~~-~---~~~~ 972 (1151)
T KOG0206|consen 898 NVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWK-RFWGWMLDGFYQSLVIFFLPYLVFEEQ-A---VTSN 972 (1151)
T ss_pred eEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchH-HHHHHHHHHHHhheeeeeeeHhhheee-e---eccC
Confidence 776655 4678875 332221 1 11233444 455557779999999998777766432 1 1112
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHH-HhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHHhhc-----------cccccc
Q 044543 758 SIRDSPHELTAAVYLQVSIVSQAL-IFVTRSRSWSFLERPGLLLIAAFIIAQLVATLIAVYAN-----------FGFARI 825 (962)
Q Consensus 758 ~~~~~~~~~~t~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 825 (962)
+...++....+.+|+.+++...+. ++.+.+ |.|+. ++.+++.++..++..+ +|.. .+++..
T Consensus 973 G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~y--wT~i~---~i~i~gSi~~~f~f~~--iy~~~~~~~~~~~~~~~~~~~ 1045 (1151)
T KOG0206|consen 973 GLTADYWTLGTTVFTIIVIVVNLKIALETSY--WTWIN---HIVIWGSILLWFVFLF--IYSELTPAISTPDPFYGVAEH 1045 (1151)
T ss_pred CCcCChhhccceEEEEEEEEEEeeeeeeehh--eeHHH---HHHHHHHHHHHHHHHH--HHhccccccCCCccHHHHHHH
Confidence 222234445555666555554443 334444 44332 2333333333222222 2211 112223
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Q 044543 826 HGIGWGWVGVIWLYSIVFYIPLDVLKFIVRYALTGK 861 (962)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~ 861 (962)
......+|+++++.++++++|+.++|++.+.++|..
T Consensus 1046 ~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~ 1081 (1151)
T KOG0206|consen 1046 LLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTD 1081 (1151)
T ss_pred HhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcH
Confidence 334556888889999999999999999998888744
No 20
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.7e-91 Score=832.67 Aligned_cols=537 Identities=25% Similarity=0.329 Sum_probs=452.4
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHcCC----C---CCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCC-eEE
Q 044543 75 LGFMWNPLSWVMEIAAIMAIALANGG----G---KPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAP-QTK 146 (962)
Q Consensus 75 l~~~~~~~~~~l~~~ail~~~l~~~~----~---~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~-~~~ 146 (962)
..||+||+.++++++++++++++... + ....|...+.+++.+++...++.++|+|++++.++|++..+. +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 35789999999999999999876311 1 112344445555566667777889999999999999998775 799
Q ss_pred EEECCe-EEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCCCc---ccccceeecceEEE
Q 044543 147 VLRDGA-WREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPGDE---VFSGSTCKQGEIEA 222 (962)
Q Consensus 147 V~Rdg~-~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~---v~~Gs~v~~G~~~~ 222 (962)
|+|||+ +++|++++|+|||+|.|++||+|||||+|++| .+.||||+|||||.|+.|++|+. +|+||.+.+|++.+
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999988 99999999999999999999999999999999 57999999999999999999988 99999999999999
Q ss_pred EEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCc
Q 044543 223 VVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIA 301 (962)
Q Consensus 223 ~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~a 301 (962)
+|+++|.+|++||+.++++++ .+++++|..++.+..++...+++.++....+.++ .+.. .++..++++++++|||+
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~a 263 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTT 263 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccch
Confidence 999999999999999999887 4678999877776554433222222221111111 1222 36788899999999999
Q ss_pred hHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccc
Q 044543 302 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRV 381 (962)
Q Consensus 302 L~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~ 381 (962)
|+..++++...|+.+|+++|+++|++.++|+||++|++|||||||||+|+|++.+... ..+.++++++.+++.++..
T Consensus 264 lg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~ 340 (679)
T PRK01122 264 IGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLA 340 (679)
T ss_pred hhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999988652 2356677788888777765
Q ss_pred cCCChHHHHHHHhhcCh---hhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccc-hHHHHHHH
Q 044543 382 ENQDAIDACIVGMLGDA---KEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLR-EDVRNKAH 457 (962)
Q Consensus 382 ~~~~~~~~al~~~~~~~---~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~ 457 (962)
.+ ||.+.|++.++... ......++..++.||++.++++++.+ +| ..++||++|.+++.|+.. .+.+++++
T Consensus 341 s~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~ 414 (679)
T PRK01122 341 DE-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELD 414 (679)
T ss_pred CC-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHH
Confidence 54 89999999877531 11111244567899999988887653 34 578999999999999642 23456778
Q ss_pred HHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH
Q 044543 458 TIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR 537 (962)
Q Consensus 458 ~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~ 537 (962)
+.+++++++|+|++++|++ ++++|+++++||+|+|++++|++||++||+++|+||||+.||.+||++
T Consensus 415 ~~~~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e 481 (679)
T PRK01122 415 AAVDEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE 481 (679)
T ss_pred HHHHHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 8889999999999999973 489999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE
Q 044543 538 LGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIA 617 (962)
Q Consensus 538 ~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIa 617 (962)
+||. ++|||++||||.++|+.+|++|++|+|+|||+||+|||++||||||
T Consensus 482 lGId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIA 531 (679)
T PRK01122 482 AGVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVA 531 (679)
T ss_pred cCCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9984 2699999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 618 VADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITI 667 (962)
Q Consensus 618 mg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni 667 (962)
||+|||+||++||+|+++++|++|++++++||++.-.--....|++..-+
T Consensus 532 MgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 532 MNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred eCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 99999999999999999999999999999999998555555667665444
No 21
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-89 Score=791.71 Aligned_cols=679 Identities=23% Similarity=0.333 Sum_probs=517.8
Q ss_pred HHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccccchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHH
Q 044543 33 NEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGI 112 (962)
Q Consensus 33 ~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i 112 (962)
.+.++......+||+..++.+|+..||+|.+..+.++.+..++++..+|+ ++|.+.++.-|... .+++++..|
T Consensus 148 ~~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~d------~Y~~YA~cI 220 (1140)
T KOG0208|consen 148 PRWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLAD------SYYYYAFCI 220 (1140)
T ss_pred hhhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhcc------cchhhhhHH
Confidence 34444455557899999999999999999999999999999999999999 66776666666532 355566668
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeC-CCeeecceEEEecCCeeEec
Q 044543 113 VVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKL-GDIIPADARLLDGDPLKIDQ 191 (962)
Q Consensus 113 ~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~-Gd~VPaD~~ll~g~~~~Vde 191 (962)
+++.+.+...+.+|.++..+.++.+-+ ....++|+|||.|++|+++|||||||+.+.+ |-..|||++|++| +|.|||
T Consensus 221 ~iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNE 298 (1140)
T KOG0208|consen 221 VIISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNE 298 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeec
Confidence 888888999999999999988887654 4568999999999999999999999999988 9999999999999 689999
Q ss_pred ccccCCCeeeecCCC-------------------Ccccccceeec------ceEEEEEEEecchhHHHhHHHhhhccCCC
Q 044543 192 SALTGESLPVTKMPG-------------------DEVFSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQE 246 (962)
Q Consensus 192 s~LTGEs~pv~K~~g-------------------~~v~~Gs~v~~------G~~~~~V~~tG~~T~~gki~~l~~~~~~~ 246 (962)
|+|||||.|+.|.+- +.+|.||.+.+ |.+.++|++||.+|..|++.+.+-.. ++
T Consensus 299 smLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyP-kP 377 (1140)
T KOG0208|consen 299 SMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYP-KP 377 (1140)
T ss_pred ccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCC-CC
Confidence 999999999999873 46899999986 56999999999999999877666543 33
Q ss_pred ChHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccc
Q 044543 247 GHFQKVLTAIGNFCIC-SIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 325 (962)
Q Consensus 247 ~~l~~~~~~i~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk 325 (962)
.+++-..+.+..+... .+++..++..++.+...+.+....+..++.++...+|+|||.++++...++..||.|+||+|-
T Consensus 378 ~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCi 457 (1140)
T KOG0208|consen 378 VNFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCI 457 (1140)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEc
Confidence 4444444443222111 111111111122223456778888999999999999999999999999999999999999999
Q ss_pred cCchHHhhcCceEEEecccccccCCceEEEEEeeeecc-c-C----------------------CCh-HHHHHHHHHhcc
Q 044543 326 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFV-K-D----------------------MDK-DTVILYGARASR 380 (962)
Q Consensus 326 ~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~-~-~----------------------~~~-~~~l~~a~~~~~ 380 (962)
+++.+...|++|++|||||||||++.+.+-...+..-. . + ..+ ..+....+.|+.
T Consensus 458 sP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHS 537 (1140)
T KOG0208|consen 458 SPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHS 537 (1140)
T ss_pred CccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhce
Confidence 99999999999999999999999999988765431000 0 0 001 122233333432
Q ss_pred c------cCCChHHHHHHHhhc------------------------Chhh--------hh-cCceEeeecCCCCCCceEE
Q 044543 381 V------ENQDAIDACIVGMLG------------------------DAKE--------AR-AGITELHFLPFNPVEKRTA 421 (962)
Q Consensus 381 ~------~~~~~~~~al~~~~~------------------------~~~~--------~~-~~~~~l~~~pF~s~~kr~s 421 (962)
. ..+||+|.-+.+..+ +|.+ .. ..+.+++.+||+|.-+|||
T Consensus 538 L~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMS 617 (1140)
T KOG0208|consen 538 LTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMS 617 (1140)
T ss_pred eEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEE
Confidence 1 124666655443221 0100 01 1477889999999999999
Q ss_pred EEEEcC-CCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCC--------CCCCCCCCceE
Q 044543 422 ITYIDS-DGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEK--------TKESPGGPWQF 492 (962)
Q Consensus 422 v~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~--------~~~~~e~~l~l 492 (962)
|++.++ +.+...|+|||||.|.++|+. +.+++.+++.++.|+.+|+|++|+|+|.++.. .++..|.+|+|
T Consensus 618 VIv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~F 696 (1140)
T KOG0208|consen 618 VIVSTGGEDKMMVFTKGAPESIAEICKP-ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEF 696 (1140)
T ss_pred EEEecCCCCceEeeccCCHHHHHHhcCc-ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhcccee
Confidence 999975 467899999999999999984 67888999999999999999999999999876 36788999999
Q ss_pred EEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCccc-----------------------
Q 044543 493 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA----------------------- 549 (962)
Q Consensus 493 lG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~----------------------- 549 (962)
+|++.||+++|++++.+|++|++|+|+++|+||||..||..+||+|||.......-.
T Consensus 697 lGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~ 776 (1140)
T KOG0208|consen 697 LGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQT 776 (1140)
T ss_pred eEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCcc
Confidence 999999999999999999999999999999999999999999999999753211000
Q ss_pred -ccccch------------h--------ccCC-----------cchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEE
Q 044543 550 -LLGQIK------------D--------ANIS-----------ALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICG 597 (962)
Q Consensus 550 -l~~~~~------------~--------~~~~-----------~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~ 597 (962)
..+... + -.++ .+.+++++.+.+|||||+|+||.++|+.||+-|+.|+
T Consensus 777 ~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vg 856 (1140)
T KOG0208|consen 777 QFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVG 856 (1140)
T ss_pred ccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEE
Confidence 000000 0 0111 2235677789999999999999999999999999999
Q ss_pred EEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 598 MTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIA 677 (962)
Q Consensus 598 miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~ 677 (962)
|||||+||+.|||+|||||+++++. |.-||.+.-.-++.+.+++.|++||...-.--..+.|...+.+..++..++.
T Consensus 857 fCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~L- 933 (1140)
T KOG0208|consen 857 FCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFL- 933 (1140)
T ss_pred ecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhee-
Confidence 9999999999999999999998643 3447788877789999999999999987766666667655554333222111
Q ss_pred HhhcCCchHHHHHHHHHHhhhc-hhcccc----CCCCCCCCCCccchHHHHHH
Q 044543 678 LIWKFDFSPFMVLIIAILNDGT-IMTISK----DRVKPSPVPDTWKLKEIFAT 725 (962)
Q Consensus 678 ~~~~~~~~p~~il~i~l~~~~~-~~~l~~----d~~~~~~~~~~~~~~~~~~~ 725 (962)
..-+..+..+|.+++.++-..+ +..++. ++..+.|+|...-.++.+..
T Consensus 934 Y~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L~s~~~~~~ 986 (1140)
T KOG0208|consen 934 YLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNLLSKKILVP 986 (1140)
T ss_pred eeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccccccchhhh
Confidence 1123567788888888876544 344432 34445555555444444433
No 22
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=4.1e-87 Score=793.14 Aligned_cols=543 Identities=23% Similarity=0.325 Sum_probs=454.7
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHcC----C--CCCCChhhH---HHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCC-e
Q 044543 75 LGFMWNPLSWVMEIAAIMAIALANG----G--GKPPDWQDF---VGIVVLLLINSTISFIEENNAGNAAAALMAGLAP-Q 144 (962)
Q Consensus 75 l~~~~~~~~~~l~~~ail~~~l~~~----~--~~~~~~~~~---~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~-~ 144 (962)
..||.||+.++++++++++++++.. + +....|++. +.+++.+++...++.++|+|++++.++|++..++ .
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 3478999999999999999987531 1 111246664 3344456777888889999999999999998876 4
Q ss_pred EEEEE-CCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCCCc---ccccceeecceE
Q 044543 145 TKVLR-DGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPGDE---VFSGSTCKQGEI 220 (962)
Q Consensus 145 ~~V~R-dg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~---v~~Gs~v~~G~~ 220 (962)
++|+| ||++++|++++|+|||+|.+++||+|||||++++| .+.||||+|||||.|+.|++|+. +|+||.+.+|++
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~ 185 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWL 185 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEE
Confidence 88885 89999999999999999999999999999999999 68999999999999999999985 899999999999
Q ss_pred EEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccC
Q 044543 221 EAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIP 299 (962)
Q Consensus 221 ~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP 299 (962)
.++|+++|.+|++||+.++++.+ .+++|+|..++.+..++.+++++.++. +..+..+. ....++..++++++++||
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~aiP 262 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLIP 262 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhCc
Confidence 99999999999999999999876 467899988777665543222221111 11111111 112356777899999999
Q ss_pred CchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhc
Q 044543 300 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARAS 379 (962)
Q Consensus 300 ~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~ 379 (962)
|+|+...+.+...|+.+|+++|+++|++.++|+||++|++|||||||||+|+|++.++.. ..+.+.++++.+++.++
T Consensus 263 ~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~ 339 (675)
T TIGR01497 263 TTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLAS 339 (675)
T ss_pred hhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhc
Confidence 998888887777899999999999999999999999999999999999999999988652 23566778888888877
Q ss_pred cccCCChHHHHHHHhhcChhh--hhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccc-hHHHHHH
Q 044543 380 RVENQDAIDACIVGMLGDAKE--ARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLR-EDVRNKA 456 (962)
Q Consensus 380 ~~~~~~~~~~al~~~~~~~~~--~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~ 456 (962)
... +||.+.|++.++.+... ....++..++.||++.++++++.+. +| ..+.||++|.+++.|... ...++++
T Consensus 340 ~~s-~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~ 414 (675)
T TIGR01497 340 LAD-DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDL 414 (675)
T ss_pred CCC-CCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHH
Confidence 654 48999999987653211 1112345678999999877765443 45 578999999999988532 2334567
Q ss_pred HHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHH
Q 044543 457 HTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR 536 (962)
Q Consensus 457 ~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~ 536 (962)
++.+++++++|.|++++|++. +++|+++++||+|||++++|++||++||+++|+|||+..+|.++|+
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~ 481 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAA 481 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 788899999999999999853 8999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE
Q 044543 537 RLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI 616 (962)
Q Consensus 537 ~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGI 616 (962)
++|+. +++||++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||
T Consensus 482 ~lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGi 531 (675)
T TIGR01497 482 EAGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGV 531 (675)
T ss_pred HcCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeE
Confidence 99984 369999999999999999999999999999999999999999999
Q ss_pred EccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 617 AVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLG 672 (962)
Q Consensus 617 amg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~ 672 (962)
||++|+++|+++||+++++++|++|++++++||+++-+......|.++.+++-.+.
T Consensus 532 Am~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~ 587 (675)
T TIGR01497 532 AMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFA 587 (675)
T ss_pred EeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHH
Confidence 99999999999999999999999999999999999999999999998877754443
No 23
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-84 Score=770.61 Aligned_cols=504 Identities=27% Similarity=0.405 Sum_probs=439.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEE-CCeEEEEECcCcCCCcEEEEeCCCeeecceEEEec
Q 044543 106 WQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLR-DGAWREQEASILVPGDVISIKLGDIIPADARLLDG 184 (962)
Q Consensus 106 ~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~R-dg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g 184 (962)
|.++..+++++++...++.+...|+.+++++|.++.|.++++++ ||++++|+.++|+|||+|.|++||+||+||++++|
T Consensus 174 f~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G 253 (713)
T COG2217 174 FEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSG 253 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeC
Confidence 36777788888888888888899999999999999999997776 56699999999999999999999999999999999
Q ss_pred CCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHH
Q 044543 185 DPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCICS 263 (962)
Q Consensus 185 ~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~ 263 (962)
+ ..||||+|||||.|+.|.+||.|++||.+.+|.....|+++|.+|.+++|.++++++ .++++.|+..+++..++++.
T Consensus 254 ~-s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~ 332 (713)
T COG2217 254 S-SSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPV 332 (713)
T ss_pred c-EEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHH
Confidence 5 589999999999999999999999999999999999999999999999999999988 48899999999999998876
Q ss_pred HHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecc
Q 044543 264 IAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 343 (962)
Q Consensus 264 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DK 343 (962)
++++.++.++++++....+|..++..++++|+++|||+|.+++|++...+..+.+++|+++|+.+++|.++++|+++|||
T Consensus 333 vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDK 412 (713)
T COG2217 333 VLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDK 412 (713)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeC
Confidence 65555555554444444678889999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEEE
Q 044543 344 TGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAIT 423 (962)
Q Consensus 344 TGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~ 423 (962)
|||||+|+|+|.+... +. + ++++++.+++..+..++ ||+..|+++++.+.. ....+..+.+|-.. ...
T Consensus 413 TGTLT~G~p~v~~v~~--~~-~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~--~~~~~~~~~i~G~G----v~~- 480 (713)
T COG2217 413 TGTLTEGKPEVTDVVA--LD-G-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG--LPDVEDFEEIPGRG----VEA- 480 (713)
T ss_pred CCCCcCCceEEEEEec--CC-C-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC--CCCccceeeeccCc----EEE-
Confidence 9999999999998662 22 3 78899999998877665 999999999765322 11112222333111 111
Q ss_pred EEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCC
Q 044543 424 YIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPR 503 (962)
Q Consensus 424 ~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr 503 (962)
..+| ..+..|++..+.+.-. +... ..+..+.+.++|..++.++... +++|+++++|++|
T Consensus 481 --~v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~R 539 (713)
T COG2217 481 --EVDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADELR 539 (713)
T ss_pred --EECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCCC
Confidence 1255 6678899998654221 1111 4556778888999999999866 8999999999999
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHH
Q 044543 504 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKY 583 (962)
Q Consensus 504 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~ 583 (962)
+|++++|++||+.|+++.|+||||..+|.++|+++||. +++|.+.||||.
T Consensus 540 ~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~AellPedK~ 589 (713)
T COG2217 540 PDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRAELLPEDKA 589 (713)
T ss_pred hhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hheccCCcHHHH
Confidence 99999999999999999999999999999999999984 369999999999
Q ss_pred HHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 584 EIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAV 663 (962)
Q Consensus 584 ~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~ 663 (962)
++|+.||++|++|+|+|||+||+|||++||||||||+|+|+|+++||++|++++++.++.+++.+|+++++||+|+.|++
T Consensus 590 ~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~ 669 (713)
T COG2217 590 EIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAF 669 (713)
T ss_pred HHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 044543 664 SITIRIVLGF 673 (962)
Q Consensus 664 ~~ni~~~l~~ 673 (962)
.+|...+...
T Consensus 670 ~yn~~~iplA 679 (713)
T COG2217 670 GYNAIAIPLA 679 (713)
T ss_pred HHHHHHHHHH
Confidence 9998655433
No 24
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-81 Score=696.35 Aligned_cols=762 Identities=20% Similarity=0.257 Sum_probs=539.8
Q ss_pred HHHhhcCCCccCccccchH----HHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 044543 53 KRLVIFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEEN 128 (962)
Q Consensus 53 ~r~~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~ 128 (962)
.++++|.+|.+...||+++ ..+++||...+++++++.++-+++.....+... ....++.+++++..+.+.+++.
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~--ty~~pl~fvl~itl~keavdd~ 151 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLS--TYWGPLGFVLTITLIKEAVDDL 151 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchh--hhhHHHHHHHHHHHHHHHHHHH
Confidence 5677899999999998753 567889999999999998888887433332222 2233455666677777888888
Q ss_pred hhhhHHHHhhcCCCCeEEEE-ECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecC----CeeEecccccCCCeeeec
Q 044543 129 NAGNAAAALMAGLAPQTKVL-RDGAWREQEASILVPGDVISIKLGDIIPADARLLDGD----PLKIDQSALTGESLPVTK 203 (962)
Q Consensus 129 ~~~~~~~~l~~~~~~~~~V~-Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~----~~~Vdes~LTGEs~pv~K 203 (962)
++.+.+..+++ .+.+++ |||-..+ +++++++||+|.+..+++||||.++++++ +|.|-+-.|+||+.-+.|
T Consensus 152 ~r~~rd~~~Ns---e~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKLr 227 (1051)
T KOG0210|consen 152 KRRRRDRELNS---EKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKLR 227 (1051)
T ss_pred HHHHhhhhhhh---hhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccceee
Confidence 77777665543 444444 6765544 99999999999999999999999999754 489999999999977766
Q ss_pred CC-----------------------------------------------CCcccccceeecceEEEEEEEecchhHHHhH
Q 044543 204 MP-----------------------------------------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKA 236 (962)
Q Consensus 204 ~~-----------------------------------------------g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki 236 (962)
-| .|.++++|.+.+|.++|+|++||.+|+
T Consensus 228 l~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtR---- 303 (1051)
T KOG0210|consen 228 LPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTR---- 303 (1051)
T ss_pred ccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHH----
Confidence 54 367999999999999999999999995
Q ss_pred HHhhhcc---CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHH
Q 044543 237 AHLVDST---NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIG 313 (962)
Q Consensus 237 ~~l~~~~---~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~ 313 (962)
..++.+ .+.+.++..+|.+.+++.+.+++..++ ++.....+..|...+.+++.++...||++|-+.+.+++.+-
T Consensus 304 -svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~v--mv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~y 380 (1051)
T KOG0210|consen 304 -SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIV--MVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVY 380 (1051)
T ss_pred -HHhccCCcccccceeeeecccHHHHHHHHHHHHHHH--HHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhH
Confidence 233333 366778888888888766555443322 33333456788888999999999999999999999999999
Q ss_pred HHHHhcC----CcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCCh---------------------
Q 044543 314 SHRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDK--------------------- 368 (962)
Q Consensus 314 ~~~l~~~----~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~--------------------- 368 (962)
+.....+ |.++|+.+.-|+||+++++.+|||||||+|+|.+++++......+.+.
T Consensus 381 s~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~ 460 (1051)
T KOG0210|consen 381 SWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKG 460 (1051)
T ss_pred hhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccc
Confidence 8888765 578999999999999999999999999999999999876422211000
Q ss_pred -------------HHHHHHHHHhcccc------------CCChHHHHHHHhhc-----------------ChhhhhcCce
Q 044543 369 -------------DTVILYGARASRVE------------NQDAIDACIVGMLG-----------------DAKEARAGIT 406 (962)
Q Consensus 369 -------------~~~l~~a~~~~~~~------------~~~~~~~al~~~~~-----------------~~~~~~~~~~ 406 (962)
.+.....+.|+... ..+|+|.|+++... .+......|+
T Consensus 461 ~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yq 540 (1051)
T KOG0210|consen 461 ALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQ 540 (1051)
T ss_pred cchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEE
Confidence 12233334444321 13677777765321 1222345799
Q ss_pred EeeecCCCCCCceEEEEEEcC-CCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC--
Q 044543 407 ELHFLPFNPVEKRTAITYIDS-DGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK-- 483 (962)
Q Consensus 407 ~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~-- 483 (962)
+++.+||+|+.|||.++++++ .|++..|.|||+.++-.....+ +.+++.-..||++|+|+|.+|.|.++++++
T Consensus 541 IL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N----dWleEE~gNMAREGLRtLVvakK~Ls~~eye~ 616 (1051)
T KOG0210|consen 541 ILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN----DWLEEECGNMAREGLRTLVVAKKVLSEEEYEA 616 (1051)
T ss_pred EEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc----hhhhhhhhhhhhhcceEEEEEecccCHHHHHH
Confidence 999999999999999999986 6899999999999987766543 455666778999999999999999988752
Q ss_pred ------------------------CCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhC
Q 044543 484 ------------------------ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 539 (962)
Q Consensus 484 ------------------------~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~G 539 (962)
..+|.+|+++|+++.||++|+|++.+++-||+|||||||+|||+.+||+.||++.+
T Consensus 617 Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~ 696 (1051)
T KOG0210|consen 617 FEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSR 696 (1051)
T ss_pred HHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhcc
Confidence 14689999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccc-----ccchh------------ccCCcc-----------hHHHHhh--hcceEEecCHhhHHHHHHHH
Q 044543 540 MGTNMYPSSALL-----GQIKD------------ANISAL-----------PVDELIE--KADGFAGVFPEHKYEIVRKL 589 (962)
Q Consensus 540 i~~~~~~~~~l~-----~~~~~------------~~~~~~-----------~~~~~~~--~~~v~arvsP~qK~~iV~~l 589 (962)
+.+......++. |+... -.++++ ++-++.. .+.||||++|+||+++++.+
T Consensus 697 L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~ll 776 (1051)
T KOG0210|consen 697 LFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLL 776 (1051)
T ss_pred ceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHH
Confidence 976432221110 00000 012232 2233332 35699999999999999999
Q ss_pred hhC-CCEEEEEcCCcCChhhhhcCCeeEEc-c-CchHHHHhcccccccCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 044543 590 QER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARGASDIVLTEPGLSVIVSAV-LTSRAIFQRMKNYTIYAVSI 665 (962)
Q Consensus 590 q~~-g~~v~miGDG~ND~~aLk~AdVGIam-g-~gt~~a~~aaDivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~ 665 (962)
|++ |..|+++|||.||+.|+++||+||++ | +|.||.- |||+.+++ |+.+-+++ -|||.+|+|-.+..+|.+-.
T Consensus 777 q~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASL-AADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHR 853 (1051)
T KOG0210|consen 777 QKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASL-AADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHR 853 (1051)
T ss_pred HHhhCceEEEEcCCCccchheeecccceeeecccccccch-hccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhh
Confidence 985 89999999999999999999999999 6 7777666 99999955 88888776 55999999999988886544
Q ss_pred HHHHHHHHHHHHHhh---cC-CchHH-HHHHHHHHhhhchhccccCCCCCCC----CC---------CccchHHHHHHHH
Q 044543 666 TIRIVLGFLLIALIW---KF-DFSPF-MVLIIAILNDGTIMTISKDRVKPSP----VP---------DTWKLKEIFATGI 727 (962)
Q Consensus 666 ni~~~l~~~~~~~~~---~~-~~~p~-~il~i~l~~~~~~~~l~~d~~~~~~----~~---------~~~~~~~~~~~~~ 727 (962)
...+..+..+++..+ +. .+.-+ ++.+..+.+-.|..++-.|+...+. .| +....+.++.| +
T Consensus 854 GL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iw-v 932 (1051)
T KOG0210|consen 854 GLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIW-V 932 (1051)
T ss_pred hHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhh-h
Confidence 332222222221111 10 12222 2333333333455777777643221 12 22233444444 5
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccccccccCCChhHHHHHHHHHHHHHHHHH-HhhhccCCCCcccchhHHHHHHHHH
Q 044543 728 VLGTYLAVMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQAL-IFVTRSRSWSFLERPGLLLIAAFII 806 (962)
Q Consensus 728 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~ 806 (962)
++++|+..+.+.+++..+.+.|. ...++.|..+.+....+ ++.+++|.| .++.+-++
T Consensus 933 LISiYQG~vim~g~~~l~~~ef~--------------~ivaisFtaLi~tELiMVaLtv~tw~~--------~m~vae~l 990 (1051)
T KOG0210|consen 933 LISIYQGSVIMYGALLLFDTEFI--------------HIVAISFTALILTELIMVALTVRTWHW--------LMVVAELL 990 (1051)
T ss_pred hHHHHcccHHHHHHHHHhhhhhe--------------EeeeeeeHHHHHHHHHHHhhhhhhhhH--------HHHHHHHH
Confidence 55888888777655555443321 12345566666666544 566666554 33333333
Q ss_pred HHHHHH--HHH--HhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Q 044543 807 AQLVAT--LIA--VYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRYALTGK 861 (962)
Q Consensus 807 ~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~ 861 (962)
++.+.. +.. -|....| -.+|.+++-+.++.++..+|..+.|++.|++-||.
T Consensus 991 sL~~Yivsl~~l~~yfd~~f----~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpS 1045 (1051)
T KOG0210|consen 991 SLALYIVSLAFLHEYFDRYF----ILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPS 1045 (1051)
T ss_pred HHHHHHHHHHHHHhHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 332211 111 1111111 12455555556777788889999999988887764
No 25
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=2e-79 Score=749.89 Aligned_cols=499 Identities=26% Similarity=0.366 Sum_probs=438.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEec
Q 044543 105 DWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDG 184 (962)
Q Consensus 105 ~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g 184 (962)
.|.+++.++++++++..++.++++|+++.+++|++..+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 68888889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHH
Q 044543 185 DPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCICS 263 (962)
Q Consensus 185 ~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~ 263 (962)
...||||+|||||.|+.|.+||.||+||.+.+|.++++|+++|.+|.+||+.++++++ .+++++|+.+++++.++...
T Consensus 285 -~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 -FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred -cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999887 47899999999999988776
Q ss_pred HHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecc
Q 044543 264 IAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 343 (962)
Q Consensus 264 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DK 343 (962)
++++.++.+++++.+.+.+|..++..++++++++|||+|.++.|++...+..+++|+|+++|+.+++|.|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 66655555555444456678888999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEEE
Q 044543 344 TGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAIT 423 (962)
Q Consensus 344 TGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~ 423 (962)
|||||+|+|+|.+... ..+.++++++.+++..+.. ..||++.|+++++.+. +. .+||.+..+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~-s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQG-STHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 9999999999988652 2346677888887766543 4599999999876421 11 24666666655321
Q ss_pred -EE-cCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCC
Q 044543 424 -YI-DSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDP 501 (962)
Q Consensus 424 -~~-~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~ 501 (962)
++ ..+|+ .+..|+++.+.+ ..+...+.++++..+|.|+++++++. +++|+++++|+
T Consensus 511 Gv~~~~~g~--~~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGE--RVLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCE--EEEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 11 23554 345689988754 11234455678899999999999854 89999999999
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
+|+|++++|++|+++|++++|+|||+..+|.++|+++||. .+++++|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999983 267789999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 044543 582 KYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIY 661 (962)
Q Consensus 582 K~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 661 (962)
|.++|+.+|+. +.|+|+|||+||+|||++|||||+||+|+++++++||++++++++..++.++.+||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 044543 662 AVSITIRIVL 671 (962)
Q Consensus 662 ~~~~ni~~~l 671 (962)
++.+|+..+.
T Consensus 697 a~~~n~~~i~ 706 (741)
T PRK11033 697 ALGLKAIFLV 706 (741)
T ss_pred HHHHHHHHHH
Confidence 9999975443
No 26
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-80 Score=715.81 Aligned_cols=538 Identities=23% Similarity=0.332 Sum_probs=458.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCe-EEEEECcCcCCCcEEEEeCCCeeecceEEEec
Q 044543 106 WQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGA-WREQEASILVPGDVISIKLGDIIPADARLLDG 184 (962)
Q Consensus 106 ~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~-~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g 184 (962)
|.+..+++.++.+...++.....++..++..|+++.|.++.++.+|+ .++|+.+.|++||+|.|++|++||+||++++|
T Consensus 341 Fdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~G 420 (951)
T KOG0207|consen 341 FDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDG 420 (951)
T ss_pred ccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeC
Confidence 33445556667777888888888888999999999999999999997 89999999999999999999999999999999
Q ss_pred CCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhccC-CCChHHHHHHHHHHHHHHH
Q 044543 185 DPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QEGHFQKVLTAIGNFCICS 263 (962)
Q Consensus 185 ~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~l~~~~~~i~~~~~~~ 263 (962)
+++||||.+|||++||.|++|+.|.+||.+.+|.....++++|.||.+++|.+++++++ .+.|.|+.+|+++.++...
T Consensus 421 -ss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~ 499 (951)
T KOG0207|consen 421 -SSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPV 499 (951)
T ss_pred -ceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCch
Confidence 57999999999999999999999999999999999999999999999999999999985 8899999999999998777
Q ss_pred HHHHHHHHHHHHhhccc----------cchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhh
Q 044543 264 IAIGMVIEIIVMYPIQH----------RAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEM 333 (962)
Q Consensus 264 i~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~L 333 (962)
+++..++.+++|.++.. ..+..++..++++++++|||+|.++.|++.+.|....+++|+++|..+++|.+
T Consensus 500 Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~ 579 (951)
T KOG0207|consen 500 VIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKA 579 (951)
T ss_pred hhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHH
Confidence 76655555555444322 34566788889999999999999999999999999999999999999999999
Q ss_pred cCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCC
Q 044543 334 AGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPF 413 (962)
Q Consensus 334 g~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF 413 (962)
.++++++||||||||+|+++|.+..+ .....+..+++.+.+..+.. ..||+..|++.++............+++..|
T Consensus 580 hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~-SeHPig~AIv~yak~~~~~~~~~~~~~~~~~ 656 (951)
T KOG0207|consen 580 HKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESG-SEHPIGKAIVDYAKEKLVEPNPEGVLSFEYF 656 (951)
T ss_pred hcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcC-CcCchHHHHHHHHHhcccccCccccceeecc
Confidence 99999999999999999999998764 33336677777776665544 4599999999998754422222223333334
Q ss_pred CCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEE
Q 044543 414 NPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFV 493 (962)
Q Consensus 414 ~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~ll 493 (962)
....+...+. .+|+. ++-|.-+.+...- ....+.+...+++-...|..+.+++... +++
T Consensus 657 pg~g~~~~~~---~~~~~--i~iGN~~~~~r~~---~~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~l~ 715 (951)
T KOG0207|consen 657 PGEGIYVTVT---VDGNE--VLIGNKEWMSRNG---CSIPDDILDALTESERKGQTVVYVAVNG-------------QLV 715 (951)
T ss_pred cCCCcccceE---EeeeE--EeechHHHHHhcC---CCCchhHHHhhhhHhhcCceEEEEEECC-------------EEE
Confidence 3333221221 23433 7889988865532 2334457777888889999999999987 999
Q ss_pred EEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcce
Q 044543 494 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADG 573 (962)
Q Consensus 494 G~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v 573 (962)
|++.++|++|+|+..+|+.||+.||++.|+||||..+|.++|+++|+. +|
T Consensus 716 gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------------------------~V 765 (951)
T KOG0207|consen 716 GVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------------------------NV 765 (951)
T ss_pred EEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc------------------------------eE
Confidence 999999999999999999999999999999999999999999999963 47
Q ss_pred EEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHH
Q 044543 574 FAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQ 653 (962)
Q Consensus 574 ~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~ 653 (962)
+|.+.|+||.++|+.+|++++.|+|+|||+||+|||.+|||||+||.|+++|.++||+||+.+++..++.+++.+|+++.
T Consensus 766 ~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~ 845 (951)
T KOG0207|consen 766 YAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVK 845 (951)
T ss_pred EeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHhhh
Q 044543 654 RMKNYTIYAVSITIRIVLGFLLIALIWKFDFSPFMVLIIAILNDG 698 (962)
Q Consensus 654 ~i~~~i~~~~~~ni~~~l~~~~~~~~~~~~~~p~~il~i~l~~~~ 698 (962)
|+|.|+.|++.+|+..++...+.++.+++.++||+--..-.+++.
T Consensus 846 rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSv 890 (951)
T KOG0207|consen 846 RIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSV 890 (951)
T ss_pred hHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhH
Confidence 999999999999998777777777777788999876655555544
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1e-77 Score=711.50 Aligned_cols=475 Identities=36% Similarity=0.534 Sum_probs=417.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHhhc--CCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEe
Q 044543 113 VVLLLINSTISFIEENNAGNAAAALMA--GLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKID 190 (962)
Q Consensus 113 ~~~~~i~~~i~~~~e~~~~~~~~~l~~--~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vd 190 (962)
+++++++.+++.+++++++++.+.+++ ..+++++|+|+| +++|++++|+|||+|.+++||+|||||+|++| .+.||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEE
Confidence 345678888999999999999999998 788899999999 99999999999999999999999999999999 68999
Q ss_pred cccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhccC-CCChHHHHHHHHH-HHHHHHHHHHH
Q 044543 191 QSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QEGHFQKVLTAIG-NFCICSIAIGM 268 (962)
Q Consensus 191 es~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~l~~~~~~i~-~~~~~~i~~~~ 268 (962)
||+|||||.|+.|.+|+.+++||.+.+|.+.+.|+.+|.+|..+++..++.+.. .++++++..+++. .++++++++++
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998764 4788899999988 55544443333
Q ss_pred HHHHHHHhhcccc--chHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEeccccc
Q 044543 269 VIEIIVMYPIQHR--AYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 346 (962)
Q Consensus 269 ~~~~~~~~~~~~~--~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGT 346 (962)
++.+++++..... +|..++..++++++++|||+||+++++++..+..+++++|+++|+++++|+||++|++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 3333322222112 37788999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEEEEEc
Q 044543 347 LTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYID 426 (962)
Q Consensus 347 LT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~ 426 (962)
||+|+|+|.++.+. . . ....+||++.|+++++.. +.++..||++.+++|++++..
T Consensus 241 LT~~~~~v~~~~~~--~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSVL--G-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEec--C-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 99999999987631 1 0 123459999999988753 123567999999999998875
Q ss_pred CCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccH
Q 044543 427 SDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDS 506 (962)
Q Consensus 427 ~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~ 506 (962)
.++ .++||+++.+.+.|.. ..+.+++++.+|+|++++|++. +++|++.++|++|+|+
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 333 4789999999998752 2334556888999999999876 8999999999999999
Q ss_pred HHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHH
Q 044543 507 AETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIV 586 (962)
Q Consensus 507 ~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV 586 (962)
+++|+.|+++|++++|+|||++.+|..+|+++|+ +|+++|+||.++|
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999985 6899999999999
Q ss_pred HHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 587 RKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSIT 666 (962)
Q Consensus 587 ~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n 666 (962)
+.+|+.|+.|+|+|||+||+|||++|||||+|+ |+++||++|+++++..++.++.+||++++++++++.|++++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 688999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 044543 667 IRIVLGFLL 675 (962)
Q Consensus 667 i~~~l~~~~ 675 (962)
+..++..++
T Consensus 475 ~~~~~~a~~ 483 (499)
T TIGR01494 475 LILIPLAAL 483 (499)
T ss_pred HHHHHHHHH
Confidence 875554443
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=4.2e-75 Score=695.77 Aligned_cols=516 Identities=27% Similarity=0.406 Sum_probs=436.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECC-eEEEEECcCcCC
Q 044543 85 VMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDG-AWREQEASILVP 163 (962)
Q Consensus 85 ~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg-~~~~i~~~~Lv~ 163 (962)
.+.++++++++++ .|.++..|+++++++..++.++++++++.+++|.+..+++++|+||| +++++++++|+|
T Consensus 4 l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 4 LMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCC
Confidence 3455666677665 78899999999999999999999999999999999999999999996 999999999999
Q ss_pred CcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc
Q 044543 164 GDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 243 (962)
Q Consensus 164 GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~ 243 (962)
||+|.+++||+|||||+|++|+ +.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|++|++.++++++
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g~-~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~ 155 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISGE-SEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA 155 (556)
T ss_pred CCEEEECCCCEeccceEEEecc-eEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH
Confidence 9999999999999999999995 799999999999999999999999999999999999999999999999999999776
Q ss_pred -CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCc
Q 044543 244 -NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 322 (962)
Q Consensus 244 -~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~i 322 (962)
.+++++|+.+++++.+++..++++.++.+++++.. ... .++..++++++++|||+||++++++++.+..+++++|+
T Consensus 156 ~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~-~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gi 232 (556)
T TIGR01525 156 QSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL-GAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGI 232 (556)
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCc
Confidence 47889999999999887665555444444443322 222 78889999999999999999999999999999999999
Q ss_pred ccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCC--hHHHHHHHHHhccccCCChHHHHHHHhhcChhh
Q 044543 323 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMD--KDTVILYGARASRVENQDAIDACIVGMLGDAKE 400 (962)
Q Consensus 323 lvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~--~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~ 400 (962)
++|+++++|.||++|++|||||||||+|+|+|.+... . .+.+ +++++.+++.++.. ..||++.|+++++.....
T Consensus 233 lvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--~-~~~~~~~~~~l~~a~~~e~~-~~hp~~~Ai~~~~~~~~~ 308 (556)
T TIGR01525 233 LIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEP--L-DDASISEEELLALAAALEQS-SSHPLARAIVRYAKKRGL 308 (556)
T ss_pred eecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEe--c-CCCCccHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999988653 2 2233 66777777766554 459999999988753211
Q ss_pred hhcCce-EeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCC
Q 044543 401 ARAGIT-ELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVP 479 (962)
Q Consensus 401 ~~~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~ 479 (962)
.... + ....+| .+.....+ +|. ..+..|+++.+ +... .+ ....++.++.++.+|+|+++++...
T Consensus 309 ~~~~-~~~~~~~~----~~gi~~~~---~g~-~~~~lg~~~~~-~~~~--~~-~~~~~~~~~~~~~~g~~~~~v~~~~-- 373 (556)
T TIGR01525 309 ELPK-QEDVEEVP----GKGVEATV---DGQ-EEVRIGNPRLL-ELAA--EP-ISASPDLLNEGESQGKTVVFVAVDG-- 373 (556)
T ss_pred Cccc-ccCeeEec----CCeEEEEE---CCe-eEEEEecHHHH-hhcC--CC-chhhHHHHHHHhhCCcEEEEEEECC--
Confidence 0000 1 111111 11222221 342 35667888876 2111 11 1223455677889999999999754
Q ss_pred CCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCC-CcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhcc
Q 044543 480 EKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDAN 558 (962)
Q Consensus 480 ~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aG-I~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~ 558 (962)
+++|.+.++|++|||++++|++|+++| ++++|+|||+..++.++++++|+.
T Consensus 374 -----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~----------------- 425 (556)
T TIGR01525 374 -----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID----------------- 425 (556)
T ss_pred -----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC-----------------
Confidence 899999999999999999999999999 999999999999999999999983
Q ss_pred CCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCc
Q 044543 559 ISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGL 638 (962)
Q Consensus 559 ~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~ 638 (962)
.+|+++.|++|.++++.+++.++.|+|+|||.||+||+++|||||++|++++.++++||+++.++++
T Consensus 426 -------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~ 492 (556)
T TIGR01525 426 -------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDL 492 (556)
T ss_pred -------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 2589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 639 SVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVL 671 (962)
Q Consensus 639 ~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l 671 (962)
+.+..++++||++++|+++++.|++.+|+..+.
T Consensus 493 ~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~ 525 (556)
T TIGR01525 493 SSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIP 525 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999986553
No 29
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.9e-75 Score=694.48 Aligned_cols=498 Identities=29% Similarity=0.425 Sum_probs=428.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCC
Q 044543 85 VMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPG 164 (962)
Q Consensus 85 ~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~G 164 (962)
++.++++++++++ +|.++..|+++++++..++.++++|+.+.+++|++..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 4566777777765 799999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc-
Q 044543 165 DVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 243 (962)
Q Consensus 165 DiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~- 243 (962)
|+|.+++||+|||||+|++| .+.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|.+||+.+++++.
T Consensus 77 Div~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 99999999999999999999 5799999999999999999999999999999999999999999999999999999876
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcc
Q 044543 244 NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 323 (962)
Q Consensus 244 ~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~il 323 (962)
.+++++|+.+++++.+++..++++.++.+++++.... +..++..++++++++|||+||+++++++..+..+++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR--WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 4788999999999988776665545544444443222 23378889999999999999999999999999999999999
Q ss_pred cccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhc
Q 044543 324 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARA 403 (962)
Q Consensus 324 vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~ 403 (962)
+|+++++|++|+++++|||||||||+|+|++.+... .+++.+++..+. ...||++.|+++++.+.+
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQ-ASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhc-cCCCcHHHHHHHHHHhcC----
Confidence 999999999999999999999999999999987542 256777765544 445999999998875321
Q ss_pred CceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC
Q 044543 404 GITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK 483 (962)
Q Consensus 404 ~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~ 483 (962)
.+...+.+|. +.... ..+|+ .+..|+++.+.+.. .+.+..+|.+++.++...
T Consensus 300 ~~~~~~~~~g----~gi~~---~~~g~--~~~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~~------ 351 (536)
T TIGR01512 300 NVESVEEVPG----EGVRA---VVDGG--EVRIGNPRSLEAAV-------------GARPESAGKTIVHVARDG------ 351 (536)
T ss_pred CCcceEEecC----CeEEE---EECCe--EEEEcCHHHHhhcC-------------CcchhhCCCeEEEEEECC------
Confidence 1222222221 11111 12453 34578887653311 014566788888887543
Q ss_pred CCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCC-cEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcc
Q 044543 484 ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISAL 562 (962)
Q Consensus 484 ~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~ 562 (962)
+++|.+.++|++|||++++|++|+++|+ +++|+|||+..+|..+++++|+.
T Consensus 352 -------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--------------------- 403 (536)
T TIGR01512 352 -------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--------------------- 403 (536)
T ss_pred -------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh---------------------
Confidence 8999999999999999999999999999 99999999999999999999984
Q ss_pred hHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc-CchHHHHhcccccccCCCchHH
Q 044543 563 PVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVI 641 (962)
Q Consensus 563 ~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg-~gt~~a~~aaDivl~~~~~~~i 641 (962)
.+|+++.|++|.++++.++++++.|+|+|||.||+||+++||+||++| ++++.++++||+++.+++++.+
T Consensus 404 ---------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 404 ---------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ---------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 248889999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 642 VSAVLTSRAIFQRMKNYTIYAVSITIRIVL 671 (962)
Q Consensus 642 ~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l 671 (962)
.+++.+||++++++++++.|++.+|+..+.
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~ 504 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLIL 504 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999975443
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=8.9e-75 Score=691.04 Aligned_cols=506 Identities=26% Similarity=0.408 Sum_probs=425.1
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEEC-CeEEEEECcCcCCCcEEEEeCCCeeecceEEEe
Q 044543 105 DWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRD-GAWREQEASILVPGDVISIKLGDIIPADARLLD 183 (962)
Q Consensus 105 ~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rd-g~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~ 183 (962)
+|.....++++++++..++.+.++|+++++++|++..+.+++++|+ |++++|++++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4455555677777778888888889999999999999999999985 677999999999999999999999999999999
Q ss_pred cCCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHH
Q 044543 184 GDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCIC 262 (962)
Q Consensus 184 g~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~ 262 (962)
|+ +.||||+|||||.|+.|++||.+|+||.+.+|.++++|+++|.+|.+||+.++++++ .+++++|+..++++.+++.
T Consensus 133 g~-~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 GE-SEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred Cc-eEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 94 799999999999999999999999999999999999999999999999999999876 4789999999999988766
Q ss_pred HHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEec
Q 044543 263 SIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 342 (962)
Q Consensus 263 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~D 342 (962)
.++++.++.++ .| ..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|.|+++|++|||
T Consensus 212 ~v~~~a~~~~~-~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALITFV-IW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHHHH-HH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 55543333222 22 24788899999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEE
Q 044543 343 KTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAI 422 (962)
Q Consensus 343 KTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv 422 (962)
||||||+|+|++.+... + .+.++++++.+++..+... .||++.|+++++..........+..+.+| .+....
T Consensus 284 KTGTLT~g~~~v~~i~~--~-~~~~~~~~l~~aa~~e~~s-~HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHV--F-GDRDRTELLALAAALEAGS-EHPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEec--C-CCCCHHHHHHHHHHHhccC-CChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEE
Confidence 99999999999998652 2 2456778888887766554 49999999988753211111111112221 122222
Q ss_pred EEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCC
Q 044543 423 TYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPP 502 (962)
Q Consensus 423 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~l 502 (962)
. .+| ..+..|+++.+.+... + ++++.++|.+++.++... +++|.+.++|++
T Consensus 356 ~---~~g--~~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 T---VEG--TKIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred E---ECC--EEEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 2 245 4577899998643211 1 112457899999888754 899999999999
Q ss_pred CccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhH
Q 044543 503 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHK 582 (962)
Q Consensus 503 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK 582 (962)
|||++++|++|++.|++++|+|||+..+|..+++++|+. +|+++.|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999972 4788899999
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 583 YEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYA 662 (962)
Q Consensus 583 ~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 662 (962)
.++++.+|++++.|+|+|||.||+||+++|||||+||.|++.++++||+++.+++++.+..++++||++++++++++.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCchHH
Q 044543 663 VSITIRIVLGFLLIALIWKFDFSPF 687 (962)
Q Consensus 663 ~~~ni~~~l~~~~~~~~~~~~~~p~ 687 (962)
+.+|+..+...+...+.+++.++|+
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCCC
Confidence 9999876655554444555556553
No 31
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1.2e-73 Score=712.44 Aligned_cols=520 Identities=23% Similarity=0.319 Sum_probs=437.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCC
Q 044543 107 QDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDP 186 (962)
Q Consensus 107 ~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~ 186 (962)
..+..+++++.+...++.+.+.|+.+++++|.+..|++++|+|||++++|+.++|+|||+|.|++||+|||||+|++| .
T Consensus 287 ~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g-~ 365 (834)
T PRK10671 287 EASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG-E 365 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc-e
Confidence 446677888888888898989999999999999999999999999999999999999999999999999999999999 5
Q ss_pred eeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHHHH
Q 044543 187 LKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCICSIA 265 (962)
Q Consensus 187 ~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~ 265 (962)
+.||||+|||||.|+.|.+||.+|+||.+.+|.+.++|+++|.+|.+||+.++++++ .+++++|+..++++.+++.+++
T Consensus 366 ~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~ 445 (834)
T PRK10671 366 AWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVV 445 (834)
T ss_pred EEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999876 4788999999999988776655
Q ss_pred HHHHHHHHHHhhccc-cchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEeccc
Q 044543 266 IGMVIEIIVMYPIQH-RAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 344 (962)
Q Consensus 266 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKT 344 (962)
++.++.+++++.... ..+..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++|||||
T Consensus 446 ~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKT 525 (834)
T PRK10671 446 VIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKT 525 (834)
T ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCC
Confidence 544443333333211 1255678889999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEEEE
Q 044543 345 GTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITY 424 (962)
Q Consensus 345 GTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~ 424 (962)
||||+|+|+|.+... ..+.++++++.+++..+... .||++.|+++++.+. ... ...+|.....+ .+..
T Consensus 526 GTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s-~hp~a~Ai~~~~~~~-----~~~--~~~~~~~~~g~-Gv~~ 593 (834)
T PRK10671 526 GTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGS-SHPLARAILDKAGDM-----TLP--QVNGFRTLRGL-GVSG 593 (834)
T ss_pred CccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHhhC-----CCC--CcccceEecce-EEEE
Confidence 999999999987542 22456777888877766544 499999998876421 110 11122222211 1111
Q ss_pred EcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCc
Q 044543 425 IDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRH 504 (962)
Q Consensus 425 ~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~ 504 (962)
. .+| ..+.+|+++.+.+.... .+.+.+.+++++++|.++++++++. +++|.+.+.|++||
T Consensus 594 ~-~~g--~~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~r~ 653 (834)
T PRK10671 594 E-AEG--HALLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPLRS 653 (834)
T ss_pred E-ECC--EEEEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcchh
Confidence 1 245 35677999987542211 2345566778889999999999865 79999999999999
Q ss_pred cHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHH
Q 044543 505 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYE 584 (962)
Q Consensus 505 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~ 584 (962)
|++++|++|++.|++++|+|||+..+|..+++++|+. ++|+++.|++|.+
T Consensus 654 ~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~~~~~~~p~~K~~ 703 (834)
T PRK10671 654 DSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------EVIAGVLPDGKAE 703 (834)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------EEEeCCCHHHHHH
Confidence 9999999999999999999999999999999999984 2689999999999
Q ss_pred HHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 585 IVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVS 664 (962)
Q Consensus 585 iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~ 664 (962)
+++.+|++++.|+|+|||.||+|||++||+||+||+|++.++++||+++++++++.|..++++||+++++|++|+.|++.
T Consensus 704 ~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~ 783 (834)
T PRK10671 704 AIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFI 783 (834)
T ss_pred HHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-hcCCchHHHH
Q 044543 665 ITIRIVLGFLLIALI-WKFDFSPFMV 689 (962)
Q Consensus 665 ~ni~~~l~~~~~~~~-~~~~~~p~~i 689 (962)
+|+..+...++.... +++.++|+.-
T Consensus 784 yn~~~i~~a~g~~~p~~g~~l~p~~a 809 (834)
T PRK10671 784 YNSLGIPIAAGILWPFTGTLLNPVVA 809 (834)
T ss_pred HHHHHHHHHHhchhhhhhcccCHHHH
Confidence 998765544322221 2334677643
No 32
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-72 Score=636.33 Aligned_cols=569 Identities=24% Similarity=0.287 Sum_probs=427.0
Q ss_pred CCHHHHHHHcCCCCCCCCH-HHHHHHHhhcCCCccCccccchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhh
Q 044543 30 IPINEVFEQLKCTREGLSN-EEGQKRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQD 108 (962)
Q Consensus 30 ~~~~~~~~~l~~~~~GLt~-~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~ 108 (962)
.|.++.+-.++. .+|+.. +|+..-.++||.|+.+...+++-..|.+....|+ ++|.+..+..|.+. .+|+.
T Consensus 148 fp~~~~~g~~~k-~~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPf-FVFQVFcvgLWCLD------eyWYy 219 (1160)
T KOG0209|consen 148 FPTDEPFGYFQK-STGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPF-FVFQVFCVGLWCLD------EYWYY 219 (1160)
T ss_pred cCcCCcchhhhh-ccCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCce-eeHhHHhHHHHHhH------HHHHH
Confidence 345554444443 356663 3444444569999999999999899999999999 67777777777775 47888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeC---CCeeecceEEEecC
Q 044543 109 FVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKL---GDIIPADARLLDGD 185 (962)
Q Consensus 109 ~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~---Gd~VPaD~~ll~g~ 185 (962)
.+.-+++++..-.--..|..+.-+.... |...+..+.|+|+++|+.+..+||.|||+|.|.. ...||||.+|+.|
T Consensus 220 SlFtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G- 297 (1160)
T KOG0209|consen 220 SLFTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG- 297 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec-
Confidence 7776666555433333444433332222 2334567899999999999999999999999976 6689999999999
Q ss_pred CeeEecccccCCCeeeecCC-----------------CCcccccceeec-------------ceEEEEEEEecchhHHHh
Q 044543 186 PLKIDQSALTGESLPVTKMP-----------------GDEVFSGSTCKQ-------------GEIEAVVIATGVHTFFGK 235 (962)
Q Consensus 186 ~~~Vdes~LTGEs~pv~K~~-----------------g~~v~~Gs~v~~-------------G~~~~~V~~tG~~T~~gk 235 (962)
+|.|||++|||||.|..|.+ ...+|.||.+++ |-+.+.|++||.+|..|+
T Consensus 298 sciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 298 SCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred ceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCc
Confidence 58999999999999999986 136999999986 558999999999999998
Q ss_pred HHHhhhc-cCCCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc------cchHhHHHHHHHHHHhccCCchHHHH
Q 044543 236 AAHLVDS-TNQEG--HFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQH------RAYRNGIDNLLVLLIGGIPIAMPTVL 306 (962)
Q Consensus 236 i~~l~~~-~~~~~--~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~l~lli~~iP~aL~~~~ 306 (962)
+.+.+-- +++.+ ..+.. .++..+++++++ ...|.+.. ++-..-+.-+..++...+|..||+-+
T Consensus 378 LvRtilf~aervTaNn~Etf------~FILFLlVFAia--Aa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmEL 449 (1160)
T KOG0209|consen 378 LVRTILFSAERVTANNRETF------IFILFLLVFAIA--AAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMEL 449 (1160)
T ss_pred eeeeEEecceeeeeccHHHH------HHHHHHHHHHHH--hhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhh
Confidence 7665533 22222 12211 112222222222 22232211 12223455566678889999999999
Q ss_pred HHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecc-------cCCChHHHHHHHHHhc
Q 044543 307 SVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFV-------KDMDKDTVILYGARAS 379 (962)
Q Consensus 307 ~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~-------~~~~~~~~l~~a~~~~ 379 (962)
+++.-.+...|+|.+++|..+-.+.-.|++|+.|||||||||...|.|...--.... .....+.+..+|++.+
T Consensus 450 SmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHs 529 (1160)
T KOG0209|consen 450 SMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHS 529 (1160)
T ss_pred hHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999874310000 0112234444444433
Q ss_pred c-----ccCCChHHHHHHHhhcChhh----------hhcCceEeeecCCCCCCceEEEEEEcCC----CCEEEEEeCcHH
Q 044543 380 R-----VENQDAIDACIVGMLGDAKE----------ARAGITELHFLPFNPVEKRTAITYIDSD----GSWHRISKGAPE 440 (962)
Q Consensus 380 ~-----~~~~~~~~~al~~~~~~~~~----------~~~~~~~l~~~pF~s~~kr~sv~~~~~~----g~~~~~~KGa~e 440 (962)
- .--+||+|.|.+..++..-+ ...+.++.+.+.|+|.-|||+++....+ -+++..+|||||
T Consensus 530 Lv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPE 609 (1160)
T KOG0209|consen 530 LVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPE 609 (1160)
T ss_pred HHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHH
Confidence 1 12369999999998853221 1124677888999999999999876321 357888999999
Q ss_pred HHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCC--------CCCCCCCCCceEEEEeecCCCCCccHHHHHHH
Q 044543 441 QIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPE--------KTKESPGGPWQFVGLLPLFDPPRHDSAETIRR 512 (962)
Q Consensus 441 ~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~--------~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~ 512 (962)
.|-++.. ++++.+++...+|+++|.||||++||+++. -.+|+.|.+|+|.|++.|..|+|+|++++|+.
T Consensus 610 vi~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~e 686 (1160)
T KOG0209|consen 610 VIQEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKE 686 (1160)
T ss_pred HHHHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHH
Confidence 9999875 677888899999999999999999999873 23688999999999999999999999999999
Q ss_pred HHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccc---------------------------------------ccc
Q 044543 513 ALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL---------------------------------------LGQ 553 (962)
Q Consensus 513 l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l---------------------------------------~~~ 553 (962)
|++.+.+|+||||||+.||.++|+++||..+..+...+ +|.
T Consensus 687 l~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~ 766 (1160)
T KOG0209|consen 687 LNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGS 766 (1160)
T ss_pred HhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchh
Confidence 99999999999999999999999999996542111100 111
Q ss_pred chhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc
Q 044543 554 IKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA 619 (962)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg 619 (962)
..+.....+.+.+++..+.||||+.|.||..++..||+.|+.++|||||.||+.|||+||||||+-
T Consensus 767 ~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL 832 (1160)
T KOG0209|consen 767 ALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL 832 (1160)
T ss_pred HHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh
Confidence 111111222445666778899999999999999999999999999999999999999999999984
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-62 Score=532.28 Aligned_cols=521 Identities=25% Similarity=0.369 Sum_probs=404.6
Q ss_pred hhhhhHHHHHHHHHHHHHHHH----cCCCCCCChhhHHHHHHHHHHHHHH----HHHHHHhhhhHHHHhhcCC-CCeEEE
Q 044543 77 FMWNPLSWVMEIAAIMAIALA----NGGGKPPDWQDFVGIVVLLLINSTI----SFIEENNAGNAAAALMAGL-APQTKV 147 (962)
Q Consensus 77 ~~~~~~~~~l~~~ail~~~l~----~~~~~~~~~~~~~~i~~~~~i~~~i----~~~~e~~~~~~~~~l~~~~-~~~~~V 147 (962)
+.+||..++.++.++++.++. ..++...++.....|.+++++..++ +.+.|-|-+...++|++.. ...+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 467888877777777776332 1122122333333444444444333 4444544444455665432 235667
Q ss_pred EEC-CeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCC---CcccccceeecceEEEE
Q 044543 148 LRD-GAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPG---DEVFSGSTCKQGEIEAV 223 (962)
Q Consensus 148 ~Rd-g~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g---~~v~~Gs~v~~G~~~~~ 223 (962)
+++ |.++.+++.+|+.||+|.++.||.||+||.+++| ..+||||++||||.||.|.+| +-+-.||.+.+.+++..
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 775 8999999999999999999999999999999999 579999999999999999998 67899999999999999
Q ss_pred EEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cccchHhHHHHHHHHHHhccCC
Q 044543 224 VIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI--QHRAYRNGIDNLLVLLIGGIPI 300 (962)
Q Consensus 224 V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~l~lli~~iP~ 300 (962)
+++.-.+|++.|+..+++.+ ++++|-+--++.+..- +.++++++. .-.|++ +...-.-.+...++++++.||-
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~---LTliFL~~~-~Tl~p~a~y~~g~~~~i~~LiALlV~LIPT 263 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSG---LTLIFLLAV-ATLYPFAIYSGGGAASVTVLVALLVCLIPT 263 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHH---HHHHHHHHH-HhhhhHHHHcCCCCcCHHHHHHHHHHHhcc
Confidence 99999999999999999877 4666655444332111 111111111 112221 1101113466788999999999
Q ss_pred chHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhcc
Q 044543 301 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASR 380 (962)
Q Consensus 301 aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~ 380 (962)
...--++..-..|+.|+.+.|++.++..++|..|.+|++..|||||+|.|+-.-.+.. -..+.+.+++...+..++-
T Consensus 264 TIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl 340 (681)
T COG2216 264 TIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASL 340 (681)
T ss_pred cHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhh
Confidence 9988888888889999999999999999999999999999999999999876555544 2457788888777776654
Q ss_pred ccCCChHHHHHHHhhcChhh-hh-cCce-EeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccch-HHHHHH
Q 044543 381 VENQDAIDACIVGMLGDAKE-AR-AGIT-ELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLRE-DVRNKA 456 (962)
Q Consensus 381 ~~~~~~~~~al~~~~~~~~~-~~-~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~ 456 (962)
. .+.|--..++..+.+... .+ +... ...+.||+.+.+++.+-. ++| ..+.|||.+.+.+..+... ..++.+
T Consensus 341 ~-DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l 415 (681)
T COG2216 341 A-DETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDL 415 (681)
T ss_pred c-cCCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHH
Confidence 3 335555666666543211 11 1111 357899998776555432 234 6788999999999876433 367888
Q ss_pred HHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHH
Q 044543 457 HTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR 536 (962)
Q Consensus 457 ~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~ 536 (962)
+...++-++.|-..|+++... +++|.+.+.|-+++|.+|-+.+||+.|||++|+||||+.||..||+
T Consensus 416 ~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 416 DAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 899999999999999999866 9999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE
Q 044543 537 RLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI 616 (962)
Q Consensus 537 ~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGI 616 (962)
+.|.++ ..|.++||+|.++|+.-|.+|+.|+|||||.||+|||.+||||+
T Consensus 483 EAGVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~ 532 (681)
T COG2216 483 EAGVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 532 (681)
T ss_pred HhCchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhh
Confidence 999852 47899999999999999999999999999999999999999999
Q ss_pred EccCchHHHHhcccccccCCCchHHHHHHHHHHHHHH
Q 044543 617 AVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQ 653 (962)
Q Consensus 617 amg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~ 653 (962)
||.+||++||+|+.+|=+|.+...+.+.++.|++..-
T Consensus 533 AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLi 569 (681)
T COG2216 533 AMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLI 569 (681)
T ss_pred hhccccHHHHHhhcccccCCCccceehHhhhhhhhee
Confidence 9999999999999999999999999999999998643
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=3.3e-35 Score=314.05 Aligned_cols=221 Identities=35% Similarity=0.532 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCe-EEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEe-cCCee
Q 044543 111 GIVVLLLINSTISFIEENNAGNAAAALMAGLAPQ-TKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLD-GDPLK 188 (962)
Q Consensus 111 ~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~-~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~-g~~~~ 188 (962)
+|+++++++.++++++++++++..+++++..+++ ++|+|||+++++++++|+|||+|.|++||.+||||+|++ | .+.
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g-~~~ 79 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG-SAY 79 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS-EEE
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc-ccc
Confidence 3677788899999999999999999999988887 999999999999999999999999999999999999999 6 799
Q ss_pred EecccccCCCeeeecC-----CCCcccccceeecceEEEEEEEecchhHHHhHHHhhhccC-CCChHHHHHHHHHHHHHH
Q 044543 189 IDQSALTGESLPVTKM-----PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QEGHFQKVLTAIGNFCIC 262 (962)
Q Consensus 189 Vdes~LTGEs~pv~K~-----~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~l~~~~~~i~~~~~~ 262 (962)
||||+||||+.|+.|. .++.+|+||.+.+|++.++|++||.+|..|++.+.+.... +++++++.++++..+++.
T Consensus 80 vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (230)
T PF00122_consen 80 VDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILII 159 (230)
T ss_dssp EECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHh
Confidence 9999999999999999 9999999999999999999999999999999999887664 568999999999988766
Q ss_pred HHHHHHHHHHHHHhh-ccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHh
Q 044543 263 SIAIGMVIEIIVMYP-IQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 332 (962)
Q Consensus 263 ~i~~~~~~~~~~~~~-~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~ 332 (962)
.++++.++.+++++. ....++...+..++++++.+||++||+++++++..++++|+++|+++|+++++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 160 IILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred cccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 555544443333222 2466778889999999999999999999999999999999999999999999995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.93 E-value=4.7e-26 Score=239.93 Aligned_cols=211 Identities=31% Similarity=0.430 Sum_probs=152.0
Q ss_pred ceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCC
Q 044543 336 MDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNP 415 (962)
Q Consensus 336 v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s 415 (962)
|++||||||||||+|+|.+ . . .+.+.++..+...+.. ..||+..++..+....... ... .+|..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---~---~~~~~~~~~~~~~~~~-s~~p~~~~~~~~~~~~~~~-~~~-----~~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---P---PSNEAALAIAAALEQG-SEHPIGKAIVEFAKNHQWS-KSL-----ESFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---S---CSHHHHHHHHHHHHCT-STSHHHHHHHHHHHHHHHH-SCC-----EEEEE
T ss_pred CeEEEEecCCCcccCeEEE---E---e---ccHHHHHHHHHHhhhc-CCCcchhhhhhhhhhccch-hhh-----hhhee
Confidence 6899999999999999998 1 1 4455666666555443 4499999998877643222 111 11111
Q ss_pred CCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEE
Q 044543 416 VEKRTAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGL 495 (962)
Q Consensus 416 ~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~ 495 (962)
...++..... ++. +. |+++.+.+..... ... ..........|.+.+.++. +++++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV--ISP--DLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH--HHH--HHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc--ccc--chhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 1122221111 121 22 8888877655321 111 1112223445555565554 4599999
Q ss_pred eecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEE
Q 044543 496 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFA 575 (962)
Q Consensus 496 i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 575 (962)
+.+.|++|+|++++|+.|+++|++++|+|||+..+|.++++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999832 24799
Q ss_pred ec--CHhhH--HHHHHHHhhCCCEEEEEcCCcCChhhhhcCC
Q 044543 576 GV--FPEHK--YEIVRKLQERKHICGMTGDGVNDAPALKKAD 613 (962)
Q Consensus 576 rv--sP~qK--~~iV~~lq~~g~~v~miGDG~ND~~aLk~Ad 613 (962)
++ +|++| .++++.||.+++.|+|+|||+||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.60 E-value=5.1e-15 Score=136.08 Aligned_cols=123 Identities=27% Similarity=0.396 Sum_probs=108.5
Q ss_pred eEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhh
Q 044543 491 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEK 570 (962)
Q Consensus 491 ~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 570 (962)
...+.++---++=++++++|++|++. ++|++.|||...+-...|.-+||+.+
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 55778888888899999999999999 99999999999999999999998643
Q ss_pred cceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEc-c--CchHHHHhcccccccCCCchHHHHH
Q 044543 571 ADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARGASDIVLTEPGLSVIVSA 644 (962)
Q Consensus 571 ~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIam-g--~gt~~a~~aaDivl~~~~~~~i~~~ 644 (962)
.+|+..-|+.|+++++.|++++++|.|+|||+||.+||++||+||.. + +.++-+.++||+++-+ ...++++
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 57999999999999999999999999999999999999999999987 4 5667788999999944 4444444
No 37
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.39 E-value=7.7e-10 Score=125.49 Aligned_cols=209 Identities=18% Similarity=0.218 Sum_probs=144.1
Q ss_pred CceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCccccc-----------------
Q 044543 489 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALL----------------- 551 (962)
Q Consensus 489 ~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~----------------- 551 (962)
+-.|.|++....+++.+....|+.|-++-|+.+-.+-.+....+-.|.++||.........+.
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 346899999999999999999999999999999999999999999999999965221111110
Q ss_pred -c-------------------cchh-----------ccC--------CcchH-----------------HHHhhhcceEE
Q 044543 552 -G-------------------QIKD-----------ANI--------SALPV-----------------DELIEKADGFA 575 (962)
Q Consensus 552 -~-------------------~~~~-----------~~~--------~~~~~-----------------~~~~~~~~v~a 575 (962)
+ ...+ ..+ ++.++ |..-.-+..|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 0 0000 000 00001 11111122588
Q ss_pred ecCHhhHHHHHHHHhhCCCEEEEEcCCcCCh--hhhhcCCeeEEccC-------------chHH--HH------------
Q 044543 576 GVFPEHKYEIVRKLQERKHICGMTGDGVNDA--PALKKADIGIAVAD-------------ATDA--AR------------ 626 (962)
Q Consensus 576 rvsP~qK~~iV~~lq~~g~~v~miGDG~ND~--~aLk~AdVGIamg~-------------gt~~--a~------------ 626 (962)
.++|+.-.++++.+|+.|++|+.+|.-.|-. -..-+|||+|++.+ ++.. |+
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSg 1053 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISG 1053 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecc
Confidence 9999999999999999999999999999843 34578999999842 1111 11
Q ss_pred ----hcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCchHHHHHHHHHHhh
Q 044543 627 ----GASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL-IALIWKFDFSPFMVLIIAILND 697 (962)
Q Consensus 627 ----~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~-~~~~~~~~~~p~~il~i~l~~~ 697 (962)
-++|+-+.+..+-+|..+|+-+|....-+|+.++|.++......+..+. ..++.+..|+--+++|...|--
T Consensus 1054 qLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~ 1129 (1354)
T KOG4383|consen 1054 QLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCI 1129 (1354)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHH
Confidence 1233334334455678888999999999999999998877655544444 3445566677677777776653
No 38
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.31 E-value=4.3e-12 Score=108.72 Aligned_cols=67 Identities=36% Similarity=0.540 Sum_probs=61.2
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccC-ccccchHHHHHHhhhhhHHHHHHHHHHHH
Q 044543 27 LERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKLE-EKKESKVLKFLGFMWNPLSWVMEIAAIMA 93 (962)
Q Consensus 27 ~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~-~~~~~~~~~~l~~~~~~~~~~l~~~ail~ 93 (962)
+|.++.+++++.|+++ .+|||++||++|+++||+|+++ .+++++|..|+++|.+|+.+++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 5889999999999965 8899999999999999999995 55678899999999999999999999886
No 39
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.15 E-value=6.4e-10 Score=114.42 Aligned_cols=166 Identities=17% Similarity=0.216 Sum_probs=114.2
Q ss_pred cCCchHHHHHHHHHHhhhc-hhccccCCCCCC-----C--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 044543 681 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-----P--VPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSE 752 (962)
Q Consensus 681 ~~~~~p~~il~i~l~~~~~-~~~l~~d~~~~~-----~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 752 (962)
|.|++|+|++|+|+++|++ ++++++|+.+++ | +.++...++.+...+..|+++++++++.|+.....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 4689999999999999997 799999887553 2 22333456677777899999999999888776531
Q ss_pred cccccc--cCCChhHHHHHHHHHHHHHHHHHHhhhccCCCCccc----chhHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 044543 753 KFGVRS--IRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLE----RPGLLLIAAFIIAQLVATLIAVYAN--FGFAR 824 (962)
Q Consensus 753 ~~g~~~--~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 824 (962)
+|... ...+..+.+|++|..+++++.++.++.|+.+.+.+. ..|.+++.+++++.++..++ +|.+ -..++
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i-~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILI-VYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHH-HHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHH-hcchhhHhhhc
Confidence 22111 011245689999999999999999999996643222 23557777777666544443 5543 23456
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 825 IHGIGWGWVGVIWLYSIVFYIPLDVLKFI 853 (962)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 853 (962)
+.+.++..|+.+++++++.++..|++|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 77888888888899999999999999974
No 40
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=98.99 E-value=8e-10 Score=93.19 Aligned_cols=60 Identities=38% Similarity=0.651 Sum_probs=53.6
Q ss_pred HcCCCC-CCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 044543 38 QLKCTR-EGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEIAAIMAIALA 97 (962)
Q Consensus 38 ~l~~~~-~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~ 97 (962)
.|+++. .|||++|+++|+++||+|+++.++ .++|..|+++|++|+.++++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 366774 499999999999999999998775 788999999999999999999999998863
No 41
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.88 E-value=9.9e-09 Score=107.28 Aligned_cols=131 Identities=15% Similarity=0.122 Sum_probs=96.2
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..-..+...+.+. ...++ .--..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~---g~~tG------------~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS---DRVVG------------YQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecC---CeeEC------------eeecCcc
Confidence 57999999999999975 99999999999999999999986321111111000 00000 0114578
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTS 648 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~g 648 (962)
+|..+++.+++.|..+.|+|||.||.||++.||+||++.....+.+.+-|+-. -.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~-~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPA-VHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCc-ccCHHHHHHHHHHH
Confidence 99999999998888899999999999999999999999765555554444433 34677777777654
No 42
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.85 E-value=8.3e-09 Score=115.10 Aligned_cols=132 Identities=19% Similarity=0.266 Sum_probs=98.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|+.....+...+... ...+.... + -+..+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg----~ltg~v~g------~---iv~~k 247 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG----KLTGNVLG------D---IVDAQ 247 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC----EEEeEecC------c---cCCcc
Confidence 47899999999999999999999999988888999999985311000000000 00000000 0 02346
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|.+.++.+.++ | +.|.++|||.||.+|++.|++|||+ ++.+..++.||.++..+++..++.++-
T Consensus 248 ~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 248 YKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 899888888654 3 5799999999999999999999999 888999999999999889988887663
No 43
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.80 E-value=1.7e-08 Score=107.01 Aligned_cols=129 Identities=22% Similarity=0.290 Sum_probs=93.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe-cCH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG-VFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar-vsP 579 (962)
++++++.+.++.|++.|+++.++||.....+..+.+.+|+..- ........ +....+ .+.+. ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~---~~~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE---DGKLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE---CCEEEE----------EecCcccCC
Confidence 5899999999999999999999999999999999999998531 11000000 000000 00011 123
Q ss_pred hhHHHHHHHHhhCC----CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHH
Q 044543 580 EHKYEIVRKLQERK----HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSA 644 (962)
Q Consensus 580 ~qK~~iV~~lq~~g----~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~ 644 (962)
..|..+++.+.++. ..|.|+||+.||.+|+++|+++++++ +.+..+++||++|.+++|..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 34777777665542 35889999999999999999999985 457788899999999998887654
No 44
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.78 E-value=3.8e-08 Score=105.11 Aligned_cols=153 Identities=25% Similarity=0.306 Sum_probs=104.8
Q ss_pred EEeecCCC-CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--Ccccc-c---ccc-----h------
Q 044543 494 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-L---GQI-----K------ 555 (962)
Q Consensus 494 G~i~i~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~--~~~~l-~---~~~-----~------ 555 (962)
|.+.-.|+ +.+.+.++|++|++.|+++.+.||.....+..+.+.+|+..... +...+ . +.. .
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33333444 67899999999999999999999999999999999999853210 00000 0 000 0
Q ss_pred ------------------hc-----------cCCcchHHHHhhhcc---------eEEecCHhh--HHHHHHHHhhC-C-
Q 044543 556 ------------------DA-----------NISALPVDELIEKAD---------GFAGVFPEH--KYEIVRKLQER-K- 593 (962)
Q Consensus 556 ------------------~~-----------~~~~~~~~~~~~~~~---------v~arvsP~q--K~~iV~~lq~~-g- 593 (962)
+. ....+.+.+.+.+.. .+..+.|.. |..-++.+.+. |
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00 000011222222111 112334433 77777777653 2
Q ss_pred --CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 594 --HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 594 --~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
..++++||+.||.+|++.|++|+||+++.+.+|+.||+|..+++-.++.++++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 35899999999999999999999999999999999999998888888888775
No 45
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.76 E-value=2.5e-08 Score=105.57 Aligned_cols=144 Identities=22% Similarity=0.255 Sum_probs=99.1
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--Ccccccc--cc------hh--------------
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSALLG--QI------KD-------------- 556 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~--~~~~l~~--~~------~~-------------- 556 (962)
++.+++.++|++|++.|+++.+.||.....+..+++.+++..... +...+.. .. ..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 388999999999999999999999999999999999999853211 0000000 00 00
Q ss_pred c----c---------CCc---chHHHHhhhcc--e-----EEecCH--hhHHHHHHHHhhC-C---CEEEEEcCCcCChh
Q 044543 557 A----N---------ISA---LPVDELIEKAD--G-----FAGVFP--EHKYEIVRKLQER-K---HICGMTGDGVNDAP 607 (962)
Q Consensus 557 ~----~---------~~~---~~~~~~~~~~~--v-----~arvsP--~qK~~iV~~lq~~-g---~~v~miGDG~ND~~ 607 (962)
. . .+. +.+.+.+.... + +..++| ..|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0 0 000 01112222111 1 122333 4788888877663 3 35899999999999
Q ss_pred hhhcCCeeEEccCchHHHHhcccccccCCCchHHHHH
Q 044543 608 ALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSA 644 (962)
Q Consensus 608 aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~ 644 (962)
|++.|++|+||+++.+.+++.||++..+++-.++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999987776666554
No 46
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.74 E-value=1.5e-08 Score=91.74 Aligned_cols=65 Identities=26% Similarity=0.445 Sum_probs=54.4
Q ss_pred CCChHHHHHHHhhcC------hhhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhcc
Q 044543 383 NQDAIDACIVGMLGD------AKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNL 448 (962)
Q Consensus 383 ~~~~~~~al~~~~~~------~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~ 448 (962)
.++|+|.||+.++.. ....+..++.++.+||||.+|||+++++ .++.+.+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 458999999988743 3456788999999999999999999998 3345677999999999999973
No 47
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.71 E-value=7.5e-08 Score=105.52 Aligned_cols=66 Identities=21% Similarity=0.221 Sum_probs=55.2
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|..-++.|.+. | ..|+++|||.||.+||+.|++|+||++|.+.+|++||+|..+++-.++..+|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 455555555442 2 34899999999999999999999999999999999999998888888888875
No 48
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.68 E-value=9.8e-08 Score=104.31 Aligned_cols=154 Identities=21% Similarity=0.226 Sum_probs=107.5
Q ss_pred EEeecCCC-CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC---------ccccc------------
Q 044543 494 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP---------SSALL------------ 551 (962)
Q Consensus 494 G~i~i~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~---------~~~l~------------ 551 (962)
|.+.-.|. +.+.+.++|+++++.|+++.++||.....+..+.+++|+...... ...+.
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 899999999999999999999999999999999999999641100 00000
Q ss_pred ---------------c-c-----chh--------------------c----------cCCcchHHHH---hh-----hcc
Q 044543 552 ---------------G-Q-----IKD--------------------A----------NISALPVDEL---IE-----KAD 572 (962)
Q Consensus 552 ---------------~-~-----~~~--------------------~----------~~~~~~~~~~---~~-----~~~ 572 (962)
. . ... . ....+.++++ +. ...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0 0 000 0 0000111111 11 011
Q ss_pred eE-------EecCH--hhHHHHHHHHhh-CCC---EEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCch
Q 044543 573 GF-------AGVFP--EHKYEIVRKLQE-RKH---ICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLS 639 (962)
Q Consensus 573 v~-------arvsP--~qK~~iV~~lq~-~g~---~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~ 639 (962)
.+ ..+.| .+|..-++.+.+ .|- .|+++||+.||.+||+.|+.||||+++.+.+++.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 22 22333 368888887776 344 399999999999999999999999999999999999998899999
Q ss_pred HHHHHHHH
Q 044543 640 VIVSAVLT 647 (962)
Q Consensus 640 ~i~~~i~~ 647 (962)
++.+++++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99988864
No 49
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.66 E-value=8.3e-08 Score=97.06 Aligned_cols=100 Identities=19% Similarity=0.276 Sum_probs=80.4
Q ss_pred HHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEec--CHhhHHHH
Q 044543 508 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV--FPEHKYEI 585 (962)
Q Consensus 508 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv--sP~qK~~i 585 (962)
.+|+.|++.|+++.++|+.+...+..+.+.+|+..- |... .|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------------------------------f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------------------------------HEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------------------------------EecCCCCHHHHHHH
Confidence 589999999999999999999999999999998521 1111 24444444
Q ss_pred HHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCC
Q 044543 586 VRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 637 (962)
Q Consensus 586 V~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~ 637 (962)
++.++-....|+++||+.||.+|++.|++++||+++.+..+..||+|...++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCC
Confidence 4444333456999999999999999999999999999999999999986554
No 50
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.62 E-value=2.3e-07 Score=98.65 Aligned_cols=146 Identities=23% Similarity=0.304 Sum_probs=99.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--Ccccc-ccc--------chh---------c---
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-LGQ--------IKD---------A--- 557 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~--~~~~l-~~~--------~~~---------~--- 557 (962)
.+.+.+.++|+++++.|+++.+.||.+...+..+.+.+|+..... +...+ ... ... .
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 377889999999999999999999999999999999999643110 00000 000 000 0
Q ss_pred -------c-------------CCcchHHHHhhhcc---------eEEecCH--hhHHHHHHHHhhC-C---CEEEEEcCC
Q 044543 558 -------N-------------ISALPVDELIEKAD---------GFAGVFP--EHKYEIVRKLQER-K---HICGMTGDG 602 (962)
Q Consensus 558 -------~-------------~~~~~~~~~~~~~~---------v~arvsP--~qK~~iV~~lq~~-g---~~v~miGDG 602 (962)
. .+.+.+.+++.... .+..+.| ..|..-++.+.++ | ..|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 00011112222111 1223334 3788888777653 3 468999999
Q ss_pred cCChhhhhcCCeeEEccCchHHHHhcccccccCCCchH----HHHHHH
Q 044543 603 VNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSV----IVSAVL 646 (962)
Q Consensus 603 ~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~----i~~~i~ 646 (962)
.||.+|++.|++|+||+++.+.+|+.||+|..+++-.+ +...++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999988777777 555543
No 51
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.61 E-value=1.1e-07 Score=95.19 Aligned_cols=97 Identities=28% Similarity=0.410 Sum_probs=78.3
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHH
Q 044543 509 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRK 588 (962)
Q Consensus 509 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~ 588 (962)
+|++|++.|+++.++||+....+..+.+++|+... |... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 99999999999999999999999999999998521 1111 234444444
Q ss_pred Hhh----CCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCC
Q 044543 589 LQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 637 (962)
Q Consensus 589 lq~----~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~ 637 (962)
+.+ ....|.|+||+.||.+|++.|+++++|.++.+..+..||+++..+.
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCC
Confidence 332 3456999999999999999999999999888889999999997664
No 52
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.60 E-value=1.2e-07 Score=104.13 Aligned_cols=66 Identities=18% Similarity=0.183 Sum_probs=55.4
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccc--cccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDI--VLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDi--vl~~~~~~~i~~~i~ 646 (962)
.|..-++.|.+. | ..|+++|||.||.+||+.|+.||||++|.+.+|++||+ +..+++-.++..+|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 477777766553 2 35899999999999999999999999999999999997 666778888888775
No 53
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.56 E-value=2.4e-07 Score=97.45 Aligned_cols=119 Identities=20% Similarity=0.208 Sum_probs=85.7
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe-cC
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG-VF 578 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar-vs 578 (962)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+....-+......+ ..++ .+... +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG----~ltG----------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG----KLTG----------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC----EEec----------eeeeeecC
Confidence 578999999999999999999999999999999999999996532111111000 0000 12332 34
Q ss_pred HhhHHHHHHHHhh-CCC---EEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccc
Q 044543 579 PEHKYEIVRKLQE-RKH---ICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVL 633 (962)
Q Consensus 579 P~qK~~iV~~lq~-~g~---~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl 633 (962)
.+.|...++.+.+ .|. .+.++|||.||.|||+.|+.+|++...... +..|+...
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l-~~~a~~~~ 199 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKL-RALADVRI 199 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHH-HHHHHHhc
Confidence 5789988866665 354 489999999999999999999999754433 33555544
No 54
>PRK10976 putative hydrolase; Provisional
Probab=98.53 E-value=2.6e-07 Score=101.02 Aligned_cols=66 Identities=20% Similarity=0.226 Sum_probs=53.7
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhccc--ccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASD--IVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaD--ivl~~~~~~~i~~~i~ 646 (962)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.||||++|.+.+|+.|| .|..+++-.++..+|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 355555555442 2 3489999999999999999999999999999999988 6777777888888775
No 55
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.45 E-value=4.5e-07 Score=97.39 Aligned_cols=146 Identities=18% Similarity=0.228 Sum_probs=100.0
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--Ccccc-c--c----------------------
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-L--G---------------------- 552 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~--~~~~l-~--~---------------------- 552 (962)
..+.+.+.++|++++++|+++.+.||.....+..+..++++..... +...+ . +
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 3467999999999999999999999999999999999999862110 00000 0 0
Q ss_pred ----------------cc---hh-------c----------------------cCCcchHHHH-------hhhc-c----
Q 044543 553 ----------------QI---KD-------A----------------------NISALPVDEL-------IEKA-D---- 572 (962)
Q Consensus 553 ----------------~~---~~-------~----------------------~~~~~~~~~~-------~~~~-~---- 572 (962)
.. .. . ..+.+.++++ .... .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 00 00 0 0000111111 1111 0
Q ss_pred --eEEecCH--hhHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHH
Q 044543 573 --GFAGVFP--EHKYEIVRKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSA 644 (962)
Q Consensus 573 --v~arvsP--~qK~~iV~~lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~ 644 (962)
-+-.++| ..|..-++.|.+. ...++++||+.||.+||+.|+.|+||+++++..+..||++....+=.++.++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 1223344 5788888887752 3568999999999999999999999999999999999999987766777765
Q ss_pred H
Q 044543 645 V 645 (962)
Q Consensus 645 i 645 (962)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
No 56
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.44 E-value=1.1e-06 Score=92.13 Aligned_cols=127 Identities=20% Similarity=0.208 Sum_probs=90.6
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.+.++.|+++ +++.++|+-....+..+.+++|+..-. .. .+.... +....+ +.-..|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f-~~-~~~~~~-~~~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLF-CH-SLEVDE-DGMITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhh-cc-eEEECC-CCeEEC------------ccccccc
Confidence 3689999999999999 999999999999999999999985311 10 000000 000000 0012378
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccc-cccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDI-VLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDi-vl~~~~~~~i~~~i 645 (962)
.|...++.++..+..+.|+|||.||.+|.++|++|+..+...+.....+++ ++ +++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 899999999888889999999999999999999999887544444445665 44 4566665444
No 57
>PLN02887 hydrolase family protein
Probab=98.43 E-value=6.8e-07 Score=106.73 Aligned_cols=52 Identities=21% Similarity=0.374 Sum_probs=48.9
Q ss_pred EEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 595 ICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 595 ~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|+++|||.||.+||+.|+.||||++|.+.+|++||+|..+++-.++..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4899999999999999999999999999999999999998888888888876
No 58
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.40 E-value=6.4e-07 Score=92.28 Aligned_cols=96 Identities=26% Similarity=0.316 Sum_probs=77.3
Q ss_pred HHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHH
Q 044543 508 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVR 587 (962)
Q Consensus 508 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~ 587 (962)
.+|+.|++.|+++.++||.....+..+++++|+..- |. ..+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 699999999999999999999999999999997421 11 1133555554
Q ss_pred HHhh-CC---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccC
Q 044543 588 KLQE-RK---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTE 635 (962)
Q Consensus 588 ~lq~-~g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~ 635 (962)
.+.+ .| ..|+|+||+.||.+|++.|+++++++++.+..+..||+++..
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~ 154 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRI 154 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecC
Confidence 4433 33 469999999999999999999999998888888899999854
No 59
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.40 E-value=1.6e-06 Score=95.12 Aligned_cols=66 Identities=24% Similarity=0.343 Sum_probs=54.9
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|..-++.+.++ | ..|+++||+.||.+|++.|++|++||++.+..++.||++..+++-.++..+|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 455555544432 3 35899999999999999999999999999999999999998888888888875
No 60
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.34 E-value=1e-06 Score=91.71 Aligned_cols=117 Identities=26% Similarity=0.376 Sum_probs=83.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++++++.+.++.|++.|+++.++|+-....+..+.+.+|+.. .+........ .... +.+.+-...|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~--~g~~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDE--KGFI----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcC--CCeE----------ecceeeEEccc
Confidence 579999999999999999999999999999999999999742 1111111000 0000 00122234567
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhccc
Q 044543 581 HKYEIVRKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASD 630 (962)
Q Consensus 581 qK~~iV~~lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaD 630 (962)
.|.++++.+.++ ...+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 788787776543 24599999999999999999999999755555666665
No 61
>PRK08238 hypothetical protein; Validated
Probab=98.33 E-value=0.00013 Score=85.94 Aligned_cols=101 Identities=16% Similarity=0.182 Sum_probs=75.1
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
|+++++.+.++++++.|+++.++|+-....+..+++.+|+.+. ++ +.+. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vi-gsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VF-ASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EE-eCCC------------------ccccCCc
Confidence 4789999999999999999999999999999999999997321 11 1110 1135567
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 626 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~ 626 (962)
.|.+.++..... +-+.++||..||.|+++.|+-.++++.+...++
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 776654432222 225789999999999999999999985554443
No 62
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.33 E-value=3.7e-06 Score=91.51 Aligned_cols=66 Identities=21% Similarity=0.206 Sum_probs=52.4
Q ss_pred hHHHHHHHHhhC------CCEEEEEcCCcCChhhhhcCCeeEEccCch---HHHHhc---ccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER------KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARGA---SDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~------g~~v~miGDG~ND~~aLk~AdVGIamg~gt---~~a~~a---aDivl~~~~~~~i~~~i~ 646 (962)
.|..-++.+.+. ...|+++||+.||.+||+.|++||||+++. +..|+. +++|..+++-.++.++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 466555555442 456999999999999999999999999887 467875 458887888888888875
No 63
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.25 E-value=5.7e-06 Score=87.50 Aligned_cols=135 Identities=16% Similarity=0.107 Sum_probs=87.6
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCccc-ccccchhccCCcchHHHHhhhcceE--E-
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA-LLGQIKDANISALPVDELIEKADGF--A- 575 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~v~--a- 575 (962)
-+++||+.+.++.|++.|+++.++||.....+..+.+.++.....+.... ..+.......+. ...+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~---------~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH---------PCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC---------CCcccccc
Confidence 35899999999999999999999999999989888888754322211111 111110000000 0000 0
Q ss_pred ecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHH--hcccccccCCCchHHHHHHH
Q 044543 576 GVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--GASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 576 rvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~--~aaDivl~~~~~~~i~~~i~ 646 (962)
.+ ...|..+++.++.....|.|+|||.||.+|++.||++++-+.-.+-.+ .-+.+.+ ++|..+...+.
T Consensus 140 ~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 140 QC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 11 347999999998877889999999999999999999887652112111 1223333 56777766654
No 64
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.25 E-value=1.1e-06 Score=90.65 Aligned_cols=92 Identities=23% Similarity=0.310 Sum_probs=70.3
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh-h-
Q 044543 504 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE-H- 581 (962)
Q Consensus 504 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~-q- 581 (962)
+++.+.|+.++++|++++++||+....+..+++.+|++........+... . +.....+++|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~------~---------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDN------G---------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECT------T---------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeec------c---------cceeeeeECCCCCC
Confidence 78889999999999999999999999999999999996421111111000 0 12245666655 4
Q ss_pred -HHHHHHHH------hhCCCEEEEEcCCcCChhhhh
Q 044543 582 -KYEIVRKL------QERKHICGMTGDGVNDAPALK 610 (962)
Q Consensus 582 -K~~iV~~l------q~~g~~v~miGDG~ND~~aLk 610 (962)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 345789999999999999986
No 65
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.24 E-value=1.5e-06 Score=94.54 Aligned_cols=64 Identities=25% Similarity=0.295 Sum_probs=54.4
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSA 644 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~ 644 (962)
.|..-++.+.+. | ..++++||+.||.+|++.|+.|++|+++.+.+++.||+++.+++-.++..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 477777777653 2 459999999999999999999999999999999999999988777776654
No 66
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.21 E-value=9.7e-06 Score=89.02 Aligned_cols=66 Identities=21% Similarity=0.136 Sum_probs=50.7
Q ss_pred hHHHHHHHHhh-------CCCEEEEEcCCcCChhhhhcCCeeEEccCch-H--H---HHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQE-------RKHICGMTGDGVNDAPALKKADIGIAVADAT-D--A---ARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~-------~g~~v~miGDG~ND~~aLk~AdVGIamg~gt-~--~---a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|..-++.|.+ ....|+++|||.||.+||+.|++||||+++. + . .+..+|++....+-.++.++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 56665555544 2346999999999999999999999998444 2 1 3447999998888888888876
No 67
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.16 E-value=5e-06 Score=82.76 Aligned_cols=108 Identities=20% Similarity=0.239 Sum_probs=75.5
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccc-cccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL-LGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
+-||++|.++.|++.|.+|.++||--..-+..+|.++||+....-...+ .+.. ....+-...+ .-+...
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~--Gk~~gfd~~~--------ptsdsg 158 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKD--GKYLGFDTNE--------PTSDSG 158 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccC--CcccccccCC--------ccccCC
Confidence 5789999999999999999999999999999999999997532211111 1000 0000000000 001124
Q ss_pred hHHHHHHHHhhC--CCEEEEEcCCcCChhhhhcCCeeEEcc
Q 044543 581 HKYEIVRKLQER--KHICGMTGDGVNDAPALKKADIGIAVA 619 (962)
Q Consensus 581 qK~~iV~~lq~~--g~~v~miGDG~ND~~aLk~AdVGIamg 619 (962)
-|.++++.+++. -..++|||||+||.+|+.-||-=|+.+
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 799999999884 357899999999999999977666654
No 68
>PLN02954 phosphoserine phosphatase
Probab=98.14 E-value=1.3e-05 Score=85.19 Aligned_cols=130 Identities=18% Similarity=0.308 Sum_probs=83.4
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCC-CCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT-NMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++|++.++++.|++.|+++.++||.....+..+.+.+|+.. +.+........ +....+.. .....+ .+.
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~--~g~~~g~~------~~~~~~--~~~ 154 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGD--SGEYAGFD------ENEPTS--RSG 154 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcC--CCcEECcc------CCCccc--CCc
Confidence 78999999999999999999999999999999999999863 11110000000 00000000 000001 123
Q ss_pred hHHHHHHHHhhC-C-CEEEEEcCCcCChhhhhc--CCeeEEccCc--hHHHHhcccccccCCCchHHHH
Q 044543 581 HKYEIVRKLQER-K-HICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARGASDIVLTEPGLSVIVS 643 (962)
Q Consensus 581 qK~~iV~~lq~~-g-~~v~miGDG~ND~~aLk~--AdVGIamg~g--t~~a~~aaDivl~~~~~~~i~~ 643 (962)
.|.+.++.+.++ | ..+.|+||+.||..|.++ ++++++.+.. .+.....+|+++ +++..+..
T Consensus 155 ~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 155 GKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred cHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 477777776654 2 568899999999999887 5666666532 233345689988 45665554
No 69
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.13 E-value=1.9e-05 Score=86.85 Aligned_cols=66 Identities=29% Similarity=0.352 Sum_probs=52.0
Q ss_pred hHHHHHHHHhh----CC-CEEEEEcCCcCChhhhhcCCeeEEccCchHHHH----hcc-cccc--cCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQE----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----GAS-DIVL--TEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~----~g-~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~----~aa-Divl--~~~~~~~i~~~i~ 646 (962)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|++|.+.+| .+| +.+. ..++-.++..+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56655655543 24 789999999999999999999999999999888 666 6776 4555677777774
No 70
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.11 E-value=8.2e-06 Score=78.80 Aligned_cols=111 Identities=24% Similarity=0.434 Sum_probs=86.2
Q ss_pred HHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHH
Q 044543 508 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVR 587 (962)
Q Consensus 508 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~ 587 (962)
-.|+.|+++||+|-+|||.+......=|+++||.. +|-. -++|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------------------------------~~qG--~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------------------------------LYQG--ISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------------------------------eeec--hHhHHHHHH
Confidence 47999999999999999999999999999999842 1111 246776666
Q ss_pred HHhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCC----chHHHHHHHHHHH
Q 044543 588 KLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG----LSVIVSAVLTSRA 650 (962)
Q Consensus 588 ~lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~----~~~i~~~i~~gR~ 650 (962)
.|.++ -.-|+++||-.||.|+|++...++|+.++.+-.++.||+|+...+ +..+.++|..++.
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~ 160 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQG 160 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccC
Confidence 65543 346999999999999999999999999999999999999986654 3334444444443
No 71
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.03 E-value=1.6e-05 Score=81.87 Aligned_cols=113 Identities=18% Similarity=0.104 Sum_probs=75.1
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe-cCH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG-VFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar-vsP 579 (962)
++++++.+.++.|++.|+++.++|+........+.+..|+.... ..++........ .+ .+.-...+..+|.. ...
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~~~-~g-~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIYSNPASFDN-DG-RHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEeccCceECC-CC-cEEEecCCCCccCcCCCC
Confidence 68999999999999999999999999999999999999885321 011111000000 00 00000000001111 112
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCeeEE
Q 044543 580 EHKYEIVRKLQER-KHICGMTGDGVNDAPALKKADIGIA 617 (962)
Q Consensus 580 ~qK~~iV~~lq~~-g~~v~miGDG~ND~~aLk~AdVGIa 617 (962)
..|.++++.++++ ...+.++|||.||..|.++||+-.|
T Consensus 148 ~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 148 CCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 3599999999887 8889999999999999999987544
No 72
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.93 E-value=3.9e-05 Score=81.47 Aligned_cols=132 Identities=14% Similarity=0.094 Sum_probs=84.0
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC--cccccccchhccCCcchHHHHhhhcce--E-E
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SSALLGQIKDANISALPVDELIEKADG--F-A 575 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~v--~-a 575 (962)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +...... .....+.......+. ... + .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~---------p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPH---------PCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccC---------Cccccccc
Confidence 57999999999999999999999999999999999888 6432110 001111100000000 000 0 0
Q ss_pred ecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHH--hcccccccCCCchHHHHHH
Q 044543 576 GVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--GASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 576 rvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~--~aaDivl~~~~~~~i~~~i 645 (962)
++ ...|..+++.++.....|.|+|||.||.+|.++||+.++-+.-.+.++ .-+.+.+ ++|..+...+
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 00 124888999888777789999999999999999999777432112222 2233333 5576666655
No 73
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.91 E-value=1.8e-05 Score=80.74 Aligned_cols=100 Identities=22% Similarity=0.271 Sum_probs=69.7
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
+++++.+.++.+++.|+++.++||.....+..+++.+|+..- +.. .+... .+....+.. ..-....+..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~-~~~-~~~~~-~~g~~~g~~--------~~~~~~~~~~ 142 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV-FAN-RLEFD-DNGLLTGPI--------EGQVNPEGEC 142 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh-eee-eEEEC-CCCEEeCcc--------CCcccCCcch
Confidence 689999999999999999999999999999999999998521 110 01000 000000000 0001245688
Q ss_pred HHHHHHHHhhC----CCEEEEEcCCcCChhhhhcC
Q 044543 582 KYEIVRKLQER----KHICGMTGDGVNDAPALKKA 612 (962)
Q Consensus 582 K~~iV~~lq~~----g~~v~miGDG~ND~~aLk~A 612 (962)
|..+++.++++ ...+.++|||.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99999887654 34589999999999999876
No 74
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.83 E-value=4.2e-05 Score=79.88 Aligned_cols=108 Identities=17% Similarity=0.140 Sum_probs=76.3
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
.++++++.+.|+.+++.|+++.++||-....+..+++.+|+..- .......+. +....+.. . --.+.+
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~--~g~~~g~~--------~-~~~~~g 153 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESE--DGIYTGNI--------D-GNNCKG 153 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcC--CCEEeCCc--------c-CCCCCC
Confidence 45899999999999999999999999999999999999998531 111111000 00000000 0 012346
Q ss_pred hhHHHHHHHHhh-CC---CEEEEEcCCcCChhhhhcCCeeEEcc
Q 044543 580 EHKYEIVRKLQE-RK---HICGMTGDGVNDAPALKKADIGIAVA 619 (962)
Q Consensus 580 ~qK~~iV~~lq~-~g---~~v~miGDG~ND~~aLk~AdVGIamg 619 (962)
+.|...++.+.+ .+ ..+.++||+.||.||++.|+.++++.
T Consensus 154 ~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 154 EGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred hHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 788887876654 33 26889999999999999999999886
No 75
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.82 E-value=8e-05 Score=79.11 Aligned_cols=125 Identities=17% Similarity=0.157 Sum_probs=88.2
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecC-
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVF- 578 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs- 578 (962)
.++.||+.+.++.|++.|+++.++||........+.+++|+.... ..++.+.. +.+..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~-------------------~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDS-------------------LPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCC-------------------CCCCCc
Confidence 357899999999999999999999999999999999999985321 11111100 11112
Q ss_pred -HhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccC----chHHHHhcccccccCCCchHHHHHHHH
Q 044543 579 -PEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARGASDIVLTEPGLSVIVSAVLT 647 (962)
Q Consensus 579 -P~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~----gt~~a~~aaDivl~~~~~~~i~~~i~~ 647 (962)
|+--..+.+.++.....+.++||+.||+.|.++|++ +|++.. ..+.....+|+++ +++..+...+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 332234445554455679999999999999999999 666632 2344455788888 778888877754
No 76
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.81 E-value=0.00012 Score=78.51 Aligned_cols=66 Identities=21% Similarity=0.241 Sum_probs=55.3
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhccc----ccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASD----IVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaD----ivl~~~~~~~i~~~i~ 646 (962)
.|...++.+.++ | ..|+++||+.||.+|++.|+.||+|+++.+..++.|| +|...++-.++.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 677777777653 3 2488999999999999999999999999999999999 7776666677887775
No 77
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.71 E-value=8.2e-05 Score=71.33 Aligned_cols=118 Identities=14% Similarity=0.052 Sum_probs=77.7
Q ss_pred ecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe
Q 044543 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG 576 (962)
Q Consensus 497 ~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 576 (962)
.-..++++++.+.+++|++.|++++++||.....+....+++|+... ...++........ ..............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIY-YPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhh-cccccccccccccccCC
Confidence 34458999999999999999999999999999999999999987321 1111110000000 00000000111123445
Q ss_pred cCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhc-CCeeEE
Q 044543 577 VFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKK-ADIGIA 617 (962)
Q Consensus 577 vsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~-AdVGIa 617 (962)
-.|+.+..+.+.+......+.++||+.||..|++. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 56777777777776666789999999999999998 444554
No 78
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.63 E-value=0.00021 Score=75.98 Aligned_cols=126 Identities=18% Similarity=0.183 Sum_probs=91.9
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecC
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVF 578 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs 578 (962)
..++=++++++++.|+++|++..++|++....+..+.+..|+..-.. .+.|.... -...-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~---~i~g~~~~----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD---VIVGGDDV----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc---eEEcCCCC----------------CCCCcC
Confidence 44678999999999999999999999999999999999999865321 11110000 011124
Q ss_pred HhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCC---eeEEccC--chHHHHhcccccccCCCchHHHHHH
Q 044543 579 PEHKYEIVRKLQERKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 579 P~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~Ad---VGIamg~--gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
|+....+.+.+....+.++||||..+|..|=|+|+ ||+..|. ........+|+++ +++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 66666666666655447999999999999999998 5666663 4566776799999 6677766554
No 79
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.57 E-value=0.00026 Score=74.23 Aligned_cols=124 Identities=19% Similarity=0.138 Sum_probs=83.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+|+.+++++|++.|+++.++||.....+...-+..|+.... . .++.... ....+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-~-~i~~~~~-----------------~~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-D-HVIGSDE-----------------VPRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-e-eEEecCc-----------------CCCCCCChH
Confidence 57899999999999999999999999998888888889885311 0 1110000 001122233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE-Ec--c--CchHHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI-AV--A--DATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGI-am--g--~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
-=..+++.++-....|+|+||+.+|..+-++|++.. ++ | +..+..+..+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 334444445444567999999999999999999953 33 3 23344566799988 5566665543
No 80
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.51 E-value=0.00036 Score=74.34 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=38.6
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 541 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~ 541 (962)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4455667999999999999999999999999999999999984
No 81
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.49 E-value=0.00033 Score=75.85 Aligned_cols=147 Identities=16% Similarity=0.161 Sum_probs=95.2
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC----Ccccc-ccc-c-hhc---------------
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY----PSSAL-LGQ-I-KDA--------------- 557 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~----~~~~l-~~~-~-~~~--------------- 557 (962)
.+..+...++|+++++.|+.++.+||........+.+++++....+ ....+ .+. . .+.
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 4567899999999999999999999999999999999999754310 00000 000 0 000
Q ss_pred --------c-----------------CCcch----H---HHHhhhc--ce---EE-----ecCH--hhHHHHHHHHhhC-
Q 044543 558 --------N-----------------ISALP----V---DELIEKA--DG---FA-----GVFP--EHKYEIVRKLQER- 592 (962)
Q Consensus 558 --------~-----------------~~~~~----~---~~~~~~~--~v---~a-----rvsP--~qK~~iV~~lq~~- 592 (962)
. ...+. + .+.+... .+ ++ .+.| ..|..-++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0 00001 1 1111111 11 11 2344 4688888887663
Q ss_pred ---CCEEEEEcCCcCChhhhhc-CCeeEEccCchHHHHhccc-------ccccCCCchHHHHHHH
Q 044543 593 ---KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARGASD-------IVLTEPGLSVIVSAVL 646 (962)
Q Consensus 593 ---g~~v~miGDG~ND~~aLk~-AdVGIamg~gt~~a~~aaD-------ivl~~~~~~~i~~~i~ 646 (962)
...|+++||+.||.+|++. ++.||+|+++.+..++.+| ++.....-+++.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3569999999999999998 6799999999988886543 5444445566666664
No 82
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.34 E-value=0.00068 Score=74.49 Aligned_cols=125 Identities=14% Similarity=0.147 Sum_probs=80.9
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
.++.+++.++++.|++.|+++.++||-....+..+..+.|+.... + .++.+.... ...-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-~-~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-R-WIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-e-EEEecCCCC-----------------CCCCCc
Confidence 368899999999999999999999999998888888888874321 0 111110000 001111
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEc--c--CchHHHHhcccccccCCCchHHHHHH
Q 044543 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAV--A--DATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIam--g--~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
+-=..+.+.+.-....|+|+||+.||+.|.++|++ .+++ | ...+..+..+|+++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 11122333332234569999999999999999998 4555 3 22333455789988 5576666543
No 83
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.29 E-value=0.0018 Score=68.74 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=35.6
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 044543 504 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 541 (962)
Q Consensus 504 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~ 541 (962)
+.+.++|++|+++|+++.++||.....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999985
No 84
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.26 E-value=0.00088 Score=70.68 Aligned_cols=123 Identities=17% Similarity=0.122 Sum_probs=81.9
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
+.||+.+.++.|++.|+++.++||.....+..+-+..|+.... ..++...... ...-.|+-
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~p~~ 143 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE-----------------HAKPDPEP 143 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC-----------------CCCCCcHH
Confidence 6899999999999999999999999999999999999985321 1111110000 01112333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEc--cC-c-hHHHHhcccccccCCCchHHHHHH
Q 044543 582 KYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAV--AD-A-TDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 582 K~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iam--g~-g-t~~a~~aaDivl~~~~~~~i~~~i 645 (962)
-..+.+.+.-....++|+||..+|..|-++|++- |++ |. . .+.....+|+++ +++..+...+
T Consensus 144 ~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 3344444443445689999999999999999983 333 32 2 233445688887 5677776654
No 85
>PLN02382 probable sucrose-phosphatase
Probab=97.23 E-value=0.0017 Score=75.53 Aligned_cols=142 Identities=18% Similarity=0.152 Sum_probs=88.7
Q ss_pred cHHHHH-HHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC----cc-cccccc------------------------
Q 044543 505 DSAETI-RRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----SS-ALLGQI------------------------ 554 (962)
Q Consensus 505 ~~~~~I-~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~----~~-~l~~~~------------------------ 554 (962)
...+++ +++++.|+..+..||..+.....+.++.++....+. .. +..+..
T Consensus 32 ~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~ 111 (413)
T PLN02382 32 LRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEET 111 (413)
T ss_pred HHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHH
Confidence 345555 889999999999999999999999999998654210 00 000000
Q ss_pred --h-----hcc-----------CCcch-------HHHHhhh----cc------eEEecCHh--hHHHHHHHHhhC----C
Q 044543 555 --K-----DAN-----------ISALP-------VDELIEK----AD------GFAGVFPE--HKYEIVRKLQER----K 593 (962)
Q Consensus 555 --~-----~~~-----------~~~~~-------~~~~~~~----~~------v~arvsP~--qK~~iV~~lq~~----g 593 (962)
. ... .+... +.+.+.+ .. -+-.+.|. .|..-++.|.++ |
T Consensus 112 ~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g 191 (413)
T PLN02382 112 SKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG 191 (413)
T ss_pred hcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC
Confidence 0 000 00001 1111111 11 12345554 488888888664 3
Q ss_pred ---CEEEEEcCCcCChhhhhcCC-eeEEccCchHHHHhcc--------ccccc-CCCchHHHHHHH
Q 044543 594 ---HICGMTGDGVNDAPALKKAD-IGIAVADATDAARGAS--------DIVLT-EPGLSVIVSAVL 646 (962)
Q Consensus 594 ---~~v~miGDG~ND~~aLk~Ad-VGIamg~gt~~a~~aa--------Divl~-~~~~~~i~~~i~ 646 (962)
..|+++||+.||.+||+.|+ .||+|+++.+..++.+ |++.. +++-.+|.+++.
T Consensus 192 i~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 192 KAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred CChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 37899999999999999999 6999999999888643 33433 334455666654
No 86
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.21 E-value=0.00093 Score=70.25 Aligned_cols=122 Identities=13% Similarity=0.101 Sum_probs=78.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+|+.++++.|++.|+++.++|+-....+..+.++.|+.... . .++.+.... ...-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~~-----------------~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-S-VLIGGDSLA-----------------QRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-c-EEEecCCCC-----------------CCCCChH
Confidence 47899999999999999999999999999999999999985321 1 111110000 0011122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE-c--cCc--hHHHHhcccccccCCCchHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIA-V--ADA--TDAARGASDIVLTEPGLSVIVS 643 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIa-m--g~g--t~~a~~aaDivl~~~~~~~i~~ 643 (962)
-=..+.+.+.-....++|+||..||..|.++|++-.. + |.+ .......+|+++ +++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 2223333333334569999999999999999998543 4 322 122334688887 55655543
No 87
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.17 E-value=0.0023 Score=70.07 Aligned_cols=139 Identities=12% Similarity=0.111 Sum_probs=85.2
Q ss_pred CCCccHHHHHHHHHh-CCCcEEEEcCCCHHHHHHHHHHhCCC--C-C---CC--Ccc----ccc----------------
Q 044543 501 PPRHDSAETIRRALN-LGVNVKMITGDQLAIAKETGRRLGMG--T-N---MY--PSS----ALL---------------- 551 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~ia~~~Gi~--~-~---~~--~~~----~l~---------------- 551 (962)
.+-+++.++|++|++ .|+.++++||..........+.+++. . + .. ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999998 79999999999999998888766642 1 0 00 000 000
Q ss_pred ---ccchh----------ccCC--cchHHHHh----hhcc--------eEEecCH--hhHHHHHHHHhhC----CCEEEE
Q 044543 552 ---GQIKD----------ANIS--ALPVDELI----EKAD--------GFAGVFP--EHKYEIVRKLQER----KHICGM 598 (962)
Q Consensus 552 ---~~~~~----------~~~~--~~~~~~~~----~~~~--------v~arvsP--~qK~~iV~~lq~~----g~~v~m 598 (962)
|...+ ...+ .+.+.++. +... .+-.+.| .+|..-|+.+.+. ...+.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00000 0001 01111111 1111 1223344 3788888776553 356899
Q ss_pred EcCCcCChhhhhcC----CeeEEccCchHHHHhcccccccCCCchHHHHHH
Q 044543 599 TGDGVNDAPALKKA----DIGIAVADATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 599 iGDG~ND~~aLk~A----dVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
+||+.||.+|++.+ +.||+||++. ..|++.|. +...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHHH
Confidence 99999999999999 9999999765 35778874 444554444
No 88
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.99 E-value=0.0021 Score=68.27 Aligned_cols=118 Identities=14% Similarity=0.159 Sum_probs=76.4
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.++++.|++.|+++.++|+........+.+++|+..-.. .++.+... ....-.|+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~-----------------~~~Kp~~~ 152 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD--ALASAEKL-----------------PYSKPHPE 152 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc--EEEEcccC-----------------CCCCCCHH
Confidence 578999999999999999999999999999999999999754321 11111000 01111222
Q ss_pred hHHHHHHHHhhC---CCEEEEEcCCcCChhhhhcCCeeEEc-cC---chHHHHhcccccccCCCchHHH
Q 044543 581 HKYEIVRKLQER---KHICGMTGDGVNDAPALKKADIGIAV-AD---ATDAARGASDIVLTEPGLSVIV 642 (962)
Q Consensus 581 qK~~iV~~lq~~---g~~v~miGDG~ND~~aLk~AdVGIam-g~---gt~~a~~aaDivl~~~~~~~i~ 642 (962)
-+-+.+++. ...|+|+||..||+.+-++|++.... .. ..+.-...+|+++ .++..+.
T Consensus 153 ---~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 153 ---VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred ---HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 222333333 34589999999999999999985443 32 2222223577777 4455543
No 89
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.97 E-value=0.0022 Score=68.48 Aligned_cols=124 Identities=14% Similarity=0.107 Sum_probs=81.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+.... . .++.+... ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f-~-~i~~~~~~-----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC-A-VLIGGDTL-----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc-c-EEEecCcC-----------------CCCCCCHH
Confidence 47899999999999999999999999988888888888875321 1 11111100 01122233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEc--cCc--h-HHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAV--ADA--T-DAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iam--g~g--t-~~a~~aaDivl~~~~~~~i~~~i 645 (962)
-=..+.+.+.-....++|+||+.||..|-++|++- |++ |.. . ...+..+|+++ +++..+...+
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 33345555554456799999999999999999985 344 321 1 12234689988 5566665543
No 90
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.95 E-value=0.005 Score=67.63 Aligned_cols=121 Identities=13% Similarity=0.085 Sum_probs=79.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++-||+.++++.|++.|+++.++|+.....+..+-+.+|+..... .++.+.. +. ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~~~~------------------~~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQAGTP------------------IL--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEecCC------------------CC--CCHH
Confidence 468999999999999999999999999999999999999854211 1111100 00 0121
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCc--h--HHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADA--T--DAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~g--t--~~a~~aaDivl~~~~~~~i~~~i 645 (962)
-=..+++.++-....|+||||+.+|+.|-++|++- |++..| + +.....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 11122222222345699999999999999999984 333222 2 23344689988 6677776654
No 91
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.95 E-value=0.0037 Score=67.84 Aligned_cols=100 Identities=14% Similarity=0.078 Sum_probs=66.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.+.++.|++.|+++.++||.....+..+-+++|+..... ..++.+.... ...-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 367999999999999999999999999999999888888754211 1112111100 1111233
Q ss_pred hHHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCe-eEEc
Q 044543 581 HKYEIVRKLQER-KHICGMTGDGVNDAPALKKADI-GIAV 618 (962)
Q Consensus 581 qK~~iV~~lq~~-g~~v~miGDG~ND~~aLk~AdV-GIam 618 (962)
-=....+.+.-. ...|+||||..+|+.|-++|++ .|++
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEE
Confidence 222333333321 3459999999999999999997 3444
No 92
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.87 E-value=0.0041 Score=65.78 Aligned_cols=124 Identities=17% Similarity=0.145 Sum_probs=79.3
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCC-CCCCcccccccchhccCCcchHHHHhhhcceEEecC
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT-NMYPSSALLGQIKDANISALPVDELIEKADGFAGVF 578 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs 578 (962)
.++.+|+.+.++.|++.|+++.++|+-....+..+-+.+|+.. +..+ .++...... ..+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~-~i~~~~~~~-----------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD-AVVCPSDVA-----------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC-EEEcCCcCC-----------------CCCCC
Confidence 3689999999999999999999999999999999999999851 1111 111111100 01112
Q ss_pred HhhHHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCeeE--EccCc---h-HHHHhcccccccCCCchHHHH
Q 044543 579 PEHKYEIVRKLQER-KHICGMTGDGVNDAPALKKADIGI--AVADA---T-DAARGASDIVLTEPGLSVIVS 643 (962)
Q Consensus 579 P~qK~~iV~~lq~~-g~~v~miGDG~ND~~aLk~AdVGI--amg~g---t-~~a~~aaDivl~~~~~~~i~~ 643 (962)
|+-=....+.+.-. ...++|+||+.+|+.|-++|++.. ++..| . +.....+|.++ +++..+..
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 22212223333222 256999999999999999999976 34222 1 22234577777 45555544
No 93
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.85 E-value=0.0088 Score=65.13 Aligned_cols=133 Identities=12% Similarity=0.111 Sum_probs=83.8
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe---
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG--- 576 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar--- 576 (962)
-++|||+.+.++.|++.|+++.++||=....+..+.+++|+..... .++ .....-..+ .+...
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~--~Iv-SN~L~f~~d-----------GvltG~~~ 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV--KVV-SNFMDFDED-----------GVLKGFKG 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc--eEE-eeeEEECCC-----------CeEeCCCC
Confidence 3579999999999999999999999999999999999999853211 110 000000000 00101
Q ss_pred --cCHhhHHHHHHH-----Hh--hCCCEEEEEcCCcCChhhhhcC---CeeEEcc--C-c----hHHHHhcccccccCCC
Q 044543 577 --VFPEHKYEIVRK-----LQ--ERKHICGMTGDGVNDAPALKKA---DIGIAVA--D-A----TDAARGASDIVLTEPG 637 (962)
Q Consensus 577 --vsP~qK~~iV~~-----lq--~~g~~v~miGDG~ND~~aLk~A---dVGIamg--~-g----t~~a~~aaDivl~~~~ 637 (962)
+....|.+.+.. ++ .....|.++|||.||++|..-. +--+.+| + - .+.=+++=||||.+|.
T Consensus 186 P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~ 265 (277)
T TIGR01544 186 PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDE 265 (277)
T ss_pred CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCC
Confidence 001345554432 22 2235688999999999996544 2233333 2 1 3345678899999998
Q ss_pred chHHHHHHH
Q 044543 638 LSVIVSAVL 646 (962)
Q Consensus 638 ~~~i~~~i~ 646 (962)
=..++.+|.
T Consensus 266 t~~v~~~il 274 (277)
T TIGR01544 266 TLEVANSIL 274 (277)
T ss_pred CchHHHHHH
Confidence 777776664
No 94
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.78 E-value=0.011 Score=64.54 Aligned_cols=43 Identities=7% Similarity=-0.014 Sum_probs=38.6
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 542 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~ 542 (962)
+..-+.+.++|++|++.||.|++.||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999853
No 95
>PRK11590 hypothetical protein; Provisional
Probab=96.73 E-value=0.0061 Score=64.31 Aligned_cols=108 Identities=12% Similarity=0.032 Sum_probs=74.9
Q ss_pred CCCccHHHHH-HHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 501 PPRHDSAETI-RRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 501 ~lr~~~~~~I-~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
++.|++.++| +.+++.|+++.++|+-....+..+++.+|+.. ...+.+...+...++. . .-..|.-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~----~~~~i~t~l~~~~tg~--------~-~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP----RVNLIASQMQRRYGGW--------V-LTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc----cCceEEEEEEEEEccE--------E-CCccCCC
Confidence 3589999999 57888999999999999999999999999621 0011122111100000 0 0123566
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcCCcCChhhhhcCCeeEEccCc
Q 044543 580 EHKYEIVRKL-QERKHICGMTGDGVNDAPALKKADIGIAVADA 621 (962)
Q Consensus 580 ~qK~~iV~~l-q~~g~~v~miGDG~ND~~aLk~AdVGIamg~g 621 (962)
++|..-++.. .......-+=||..||.|||+.|+-.++++..
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 8888877654 33344566889999999999999999999743
No 96
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.66 E-value=0.01 Score=65.02 Aligned_cols=93 Identities=13% Similarity=0.042 Sum_probs=62.4
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..-.. ..++.+.. .....|
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~-------------------~~~~KP- 159 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDD-------------------VPAGRP- 159 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCc-------------------CCCCCC-
Confidence 467899999999999999999999999988877777777643211 11111110 001112
Q ss_pred hHHHHHHHHhhCC----CEEEEEcCCcCChhhhhcCCe
Q 044543 581 HKYEIVRKLQERK----HICGMTGDGVNDAPALKKADI 614 (962)
Q Consensus 581 qK~~iV~~lq~~g----~~v~miGDG~ND~~aLk~AdV 614 (962)
+..-+.+.+++.| ..++||||..+|+.|-++|++
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 1122333444332 469999999999999999997
No 97
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.64 E-value=0.0099 Score=71.62 Aligned_cols=48 Identities=10% Similarity=0.079 Sum_probs=39.5
Q ss_pred EEeecCCC-CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 044543 494 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 541 (962)
Q Consensus 494 G~i~i~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~ 541 (962)
|.+.-.|. .-+.+.++|++|+++|+.+++.||.....+..+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44443333 3457899999999999999999999999999999999974
No 98
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.61 E-value=0.0028 Score=66.03 Aligned_cols=94 Identities=18% Similarity=0.100 Sum_probs=66.9
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecC
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVF 578 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs 578 (962)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+..-. ..++.+. ++..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~------------------~~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWME------------------DCPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeec------------------CCCCCcC
Confidence 4556778899999999999999999999999999999999985321 1111110 1111334
Q ss_pred HhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcC
Q 044543 579 PEHKYEIVRKLQERKHICGMTGDGVNDAPALKKA 612 (962)
Q Consensus 579 P~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~A 612 (962)
|+--..+.+.+.-....|+||||+.+|+.|-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 5544555566555556799999999999887654
No 99
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.46 E-value=0.01 Score=64.63 Aligned_cols=120 Identities=16% Similarity=0.096 Sum_probs=77.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+|+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ..++.+.... ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 46899999999999999999999999999999999999985321 1122111110 0111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEc-cCchHHHHhcccccccCCCchHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAV-ADATDAARGASDIVLTEPGLSVI 641 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iam-g~gt~~a~~aaDivl~~~~~~~i 641 (962)
-=....+.+.-....++|+||..+|+.|-++|++- |++ |.........+|+++ ++++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 22233444443445699999999999999999983 344 322222233578877 445444
No 100
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.42 E-value=0.01 Score=61.98 Aligned_cols=39 Identities=31% Similarity=0.392 Sum_probs=35.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhC
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 539 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~G 539 (962)
++.+++.++|++|++.|+++.++||.....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999988754
No 101
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.41 E-value=0.0095 Score=62.79 Aligned_cols=107 Identities=11% Similarity=0.021 Sum_probs=73.9
Q ss_pred CCCccHHHHHH-HHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 501 PPRHDSAETIR-RALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~-~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
.++|++.++|+ .+++.|++++++|+=....+..+++..++... ..++ +...+.. ++-. + .=..|.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~~i-~t~le~~-~gg~----~----~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LNLI-ASQIERG-NGGW----V----LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---CcEE-EEEeEEe-CCce----E----cCccCCC
Confidence 46899999996 78889999999999999999999998655221 0111 2221110 0000 0 0123566
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcCCcCChhhhhcCCeeEEccC
Q 044543 580 EHKYEIVRKL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 620 (962)
Q Consensus 580 ~qK~~iV~~l-q~~g~~v~miGDG~ND~~aLk~AdVGIamg~ 620 (962)
++|..-++.. ......+-+=||..||.|||+.||-.+++..
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 8898877644 3233456689999999999999999999963
No 102
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.36 E-value=0.008 Score=71.19 Aligned_cols=123 Identities=12% Similarity=0.088 Sum_probs=81.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
+|.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ..++.+.... ..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 57899999999999999999999999999999999999985321 1111111100 011232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEcc--CchHHHHhcccccccCCCchHHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVA--DATDAARGASDIVLTEPGLSVIVSAVLT 647 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg--~gt~~a~~aaDivl~~~~~~~i~~~i~~ 647 (962)
-=....+.++ ...+.|+||..+|+.|-++|++ .|++. .+.+.....+|+++ +++..+...+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 1112222221 3469999999999999999998 45553 22222234588888 567777776643
No 103
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.34 E-value=0.015 Score=62.90 Aligned_cols=116 Identities=13% Similarity=0.126 Sum_probs=77.4
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.++++.|++.|+++.++|+-....+...-+.+|+.... ..++.+.... ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 46889999999999999999999999999999999999985321 1122111110 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCc---hHHHHhcccccccC
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADA---TDAARGASDIVLTE 635 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~g---t~~a~~aaDivl~~ 635 (962)
-=....+.++-....++|+||..+|+.|-++|++- |++..| .+.....+|+++.+
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 33344444444456699999999999999999984 334222 22223468888844
No 104
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.26 E-value=0.024 Score=58.22 Aligned_cols=144 Identities=19% Similarity=0.246 Sum_probs=94.4
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccc-------cccchhc------cCCcchHHHHh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL-------LGQIKDA------NISALPVDELI 568 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l-------~~~~~~~------~~~~~~~~~~~ 568 (962)
+-||+.+|.+.|++. ...+++|---.+-+.++|..+|++........+ ...+-.+ ..+..+-+++.
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 568999999999876 456667777778899999999996432211111 0000000 01111112222
Q ss_pred hhc-ceEEecCHhhHHHHHHHHhhC------------------CCEEEEEcCCcCChhhhhcCCe--eEEcc-CchHHHH
Q 044543 569 EKA-DGFAGVFPEHKYEIVRKLQER------------------KHICGMTGDGVNDAPALKKADI--GIAVA-DATDAAR 626 (962)
Q Consensus 569 ~~~-~v~arvsP~qK~~iV~~lq~~------------------g~~v~miGDG~ND~~aLk~AdV--GIamg-~gt~~a~ 626 (962)
++. ++|.|..|.+-.+|++..+.- ....+++||.+.|+.||+.+.= |+|++ +|.+-|.
T Consensus 163 e~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYal 242 (315)
T COG4030 163 EKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYAL 242 (315)
T ss_pred HHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcccc
Confidence 222 258888887655555444431 2346789999999999998853 58887 8888888
Q ss_pred hcccccccCCCchHHHHHHH
Q 044543 627 GASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 627 ~aaDivl~~~~~~~i~~~i~ 646 (962)
.-||+.+..++.+.....|.
T Consensus 243 ~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 243 KEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccceEEeccchhhhhHHHH
Confidence 89999999999888877775
No 105
>PRK11587 putative phosphatase; Provisional
Probab=96.22 E-value=0.016 Score=61.41 Aligned_cols=114 Identities=14% Similarity=0.110 Sum_probs=71.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.++++.|++.|+++.++|+.....+...-+..|+... ..++.+.... ...-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~---~~i~~~~~~~-----------------~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP---EVFVTAERVK-----------------RGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc---cEEEEHHHhc-----------------CCCCCcH
Confidence 4789999999999999999999999887766666666776321 1111111000 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccCch-HHHHhccccccc
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVADAT-DAARGASDIVLT 634 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~gt-~~a~~aaDivl~ 634 (962)
-=....+.+.-....++|+||..+|+.|-++|++ .|++..+. ......+|+++.
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 2223333333344679999999999999999998 46664322 223345777763
No 106
>PRK06769 hypothetical protein; Validated
Probab=96.16 E-value=0.015 Score=59.37 Aligned_cols=123 Identities=13% Similarity=0.026 Sum_probs=69.9
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHH--------HHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcce
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLA--------IAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADG 573 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~--------tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v 573 (962)
+-||+++++++|++.|+++.++|+.... .....-+..|+..- +......+... -
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI-YLCPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE-EECcCCCCCCC-----------------C
Confidence 6799999999999999999999987531 12222334454210 00000000000 0
Q ss_pred EEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEcc--CchH--------HHHhcccccccCCCchHHH
Q 044543 574 FAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVA--DATD--------AARGASDIVLTEPGLSVIV 642 (962)
Q Consensus 574 ~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg--~gt~--------~a~~aaDivl~~~~~~~i~ 642 (962)
...-.|+-=..+.+.+.-.-+.+.||||..+|+.|-++|++ +|++. .+.+ .....+|+++ +++..+.
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~--~~~~el~ 168 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIA--ENFEDAV 168 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchh--hCHHHHH
Confidence 11222333334444444344569999999999999999998 44443 2332 1123466776 4455555
Q ss_pred HH
Q 044543 643 SA 644 (962)
Q Consensus 643 ~~ 644 (962)
..
T Consensus 169 ~~ 170 (173)
T PRK06769 169 NW 170 (173)
T ss_pred HH
Confidence 43
No 107
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.11 E-value=0.0081 Score=64.30 Aligned_cols=91 Identities=21% Similarity=0.241 Sum_probs=62.9
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCC----CHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEec
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV 577 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv 577 (962)
+.+++.+.++.+++.|+++.++|+- ...++..+.+.+|+.... ..++.++... .-
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f--~~i~~~d~~~-------------------~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN--PVIFAGDKPG-------------------QY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe--eEEECCCCCC-------------------CC
Confidence 4556999999999999999999997 667999999999995311 1111111100 00
Q ss_pred CHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEc
Q 044543 578 FPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAV 618 (962)
Q Consensus 578 sP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIam 618 (962)
.| +|. ..+++.| +++|+||..||..+-++|++ +|++
T Consensus 174 Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 174 QY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 12 232 2445555 47899999999999999987 4555
No 108
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.08 E-value=0.0097 Score=63.67 Aligned_cols=92 Identities=21% Similarity=0.256 Sum_probs=64.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCC----CHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG 576 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 576 (962)
.|.+++.+.++.+++.|+++.++||. ...|+..+.+..|++.+.+-...+.|..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~---------------------- 171 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK---------------------- 171 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC----------------------
Confidence 36788999999999999999999995 4669999999999953221111221110
Q ss_pred cCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEc
Q 044543 577 VFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAV 618 (962)
Q Consensus 577 vsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIam 618 (962)
..-.+|.. .+++.| .++|+||..+|..+-++|++ +|++
T Consensus 172 ~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 172 PGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred CCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 00134444 334444 48899999999999999998 5655
No 109
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=95.97 E-value=0.034 Score=69.77 Aligned_cols=171 Identities=18% Similarity=0.197 Sum_probs=98.9
Q ss_pred HHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeec--CCCCCccHHHHHHHHHh-CCCcEEEEcCCCHHHHHH
Q 044543 457 HTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPL--FDPPRHDSAETIRRALN-LGVNVKMITGDQLAIAKE 533 (962)
Q Consensus 457 ~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i--~D~lr~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~ 533 (962)
+...+.|...-.|.+++-+.. +++....- ...+.+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 344556655556777766543 33332110 12367899999999999 699999999999988877
Q ss_pred HHHHhCCCC---CC---C-Cccc---cc----------------------ccchhc---------cCCcch--------H
Q 044543 534 TGRRLGMGT---NM---Y-PSSA---LL----------------------GQIKDA---------NISALP--------V 564 (962)
Q Consensus 534 ia~~~Gi~~---~~---~-~~~~---l~----------------------~~~~~~---------~~~~~~--------~ 564 (962)
.....++.- +- . +... .. |...+. ...+.+ +
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 665454310 00 0 0000 00 000000 000011 1
Q ss_pred HHHhhh----cc--e-----EEecCH--hhHHHHHHHHhhC--CCEEEEEcCCcCChhhhhcC---CeeEEccCchHHHH
Q 044543 565 DELIEK----AD--G-----FAGVFP--EHKYEIVRKLQER--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAAR 626 (962)
Q Consensus 565 ~~~~~~----~~--v-----~arvsP--~qK~~iV~~lq~~--g~~v~miGDG~ND~~aLk~A---dVGIamg~gt~~a~ 626 (962)
.+.+.. .. + +-.+.| -+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 00 1 123334 4798888888773 35799999999999999987 588888874 4
Q ss_pred hcccccccCCCchHHHHHHH
Q 044543 627 GASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 627 ~aaDivl~~~~~~~i~~~i~ 646 (962)
.+|++.|.++ ..+...++
T Consensus 704 s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 704 SRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CcceEeCCCH--HHHHHHHH
Confidence 5788998654 44554443
No 110
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=95.90 E-value=0.016 Score=61.33 Aligned_cols=98 Identities=16% Similarity=0.161 Sum_probs=65.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH-
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP- 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP- 579 (962)
++.||+.++++.|++.|+++.++|+-....+...-+.+|+.... . .++.+.. ..+..|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-~-~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF-D-AVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc-c-EEEEecc-------------------CCCCCCC
Confidence 47899999999999999999999998888888888888874321 1 1111100 111122
Q ss_pred -hhHHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCe-eEEcc
Q 044543 580 -EHKYEIVRKLQERKHICGMTGDGV-NDAPALKKADI-GIAVA 619 (962)
Q Consensus 580 -~qK~~iV~~lq~~g~~v~miGDG~-ND~~aLk~AdV-GIamg 619 (962)
+-=..+.+.+.-....++|+||.. +|+.+-++|++ .|.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 221222333322345699999998 99999999998 55554
No 111
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.81 E-value=0.021 Score=63.55 Aligned_cols=108 Identities=14% Similarity=0.094 Sum_probs=76.1
Q ss_pred ecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe
Q 044543 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG 576 (962)
Q Consensus 497 ~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 576 (962)
...+++.+++.++++.|++.|+++.++||.....+..+.+.+|+...... .+.+.. .....+.. ..--+
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~--------~~~~~~~~-~~~~k 251 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRP--------PDMHFQRE-QGDKR 251 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCc--------chhhhccc-CCCCC
Confidence 36788999999999999999999999999999999999999987531111 111111 00000000 00123
Q ss_pred cCHhhHHHHHHHHhh-CCCEEEEEcCCcCChhhhhcCCee
Q 044543 577 VFPEHKYEIVRKLQE-RKHICGMTGDGVNDAPALKKADIG 615 (962)
Q Consensus 577 vsP~qK~~iV~~lq~-~g~~v~miGDG~ND~~aLk~AdVG 615 (962)
-.|+-|....+.+-. .-..++|+||..+|+.+-++|++-
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~ 291 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLE 291 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCe
Confidence 446777777776543 347899999999999999999985
No 112
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.76 E-value=0.023 Score=62.96 Aligned_cols=116 Identities=17% Similarity=0.115 Sum_probs=69.2
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.+.++.|++.|+++.++|+-.......+-+..+...-......+.+.... ...-.|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~-----------------~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP-----------------KKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC-----------------CCCCCHH
Confidence 47899999999999999999999998877776665554321100000111110000 1111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEc-cCc--hHHHHhcccccc
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAV-ADA--TDAARGASDIVL 633 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIam-g~g--t~~a~~aaDivl 633 (962)
-=..+.+.+.-....++||||+.+|+.|-++|++.... ..| +.-....+|+++
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi 262 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF 262 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE
Confidence 22334444443445699999999999999999985443 222 111123578887
No 113
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.67 E-value=0.033 Score=63.55 Aligned_cols=120 Identities=18% Similarity=0.152 Sum_probs=78.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+|+.+.++.|++.|+++.++|+-....+..+-+..||.... ..++.+.... ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC-----------------CCCCCHH
Confidence 36799999999999999999999999999999999999985321 1111111000 0111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCchHHH-HhcccccccCCCchHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADATDAA-RGASDIVLTEPGLSVI 641 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~gt~~a-~~aaDivl~~~~~~~i 641 (962)
-=....+.+.-....|+|+||..+|+.|-++|++- |++..+.+.. ...+|+++ +++..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 22344444544566799999999999999999983 3444332222 23578877 445444
No 114
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.66 E-value=0.046 Score=56.10 Aligned_cols=128 Identities=20% Similarity=0.124 Sum_probs=70.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHH---------------HHHHHHHHhCCCCCCCCcccccccchhccCCcchHH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IAKETGRRLGMGTNMYPSSALLGQIKDANISALPVD 565 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~---------------tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 565 (962)
++.+|+.+++++|++.|+++.++|..... ....+-++.|+.-+ .++..... ..+.
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~----~~~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHH----PEDG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCC----CCCC--
Confidence 36799999999999999999999987621 11122233444110 00000000 0000
Q ss_pred HHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCch--H-HHHhcc--cccccCCCch
Q 044543 566 ELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT--D-AARGAS--DIVLTEPGLS 639 (962)
Q Consensus 566 ~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~gt--~-~a~~aa--Divl~~~~~~ 639 (962)
.....-.|+--..+.+.+.-..+.++|+||..+|+.+-++|++. |++..|. . .....+ |+++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 00112223333444454544456799999999999999999973 2332322 1 112235 7777 5566
Q ss_pred HHHHHHH
Q 044543 640 VIVSAVL 646 (962)
Q Consensus 640 ~i~~~i~ 646 (962)
.+...+.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 6665543
No 115
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.45 E-value=0.037 Score=57.48 Aligned_cols=94 Identities=15% Similarity=0.149 Sum_probs=63.6
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.+++++|++.|+++.++|+-+......+.+.+|+.... . .++.... .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f-d-~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF-D-AVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh-h-eeEehhh-------------------cCCCCCC
Confidence 47899999999999999999999998888888888889974221 1 1111100 0111222
Q ss_pred --hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 044543 581 --HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG 615 (962)
Q Consensus 581 --qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG 615 (962)
-=..+.+.+.-....++|+||+.+|+.+-++|++-
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 11223333333345689999999999999998874
No 116
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.42 E-value=0.024 Score=57.96 Aligned_cols=93 Identities=12% Similarity=0.030 Sum_probs=57.6
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.++++.|+++|+++.++|+... +...-+.+|+.... ..++.+... ...+-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEI-----------------KKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhc-----------------CCCCCChH
Confidence 5789999999999999999999997532 34567777774321 111111100 01111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI 614 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV 614 (962)
-=....+.+.-....++||||..+|+.+-++|++
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~ 179 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGM 179 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCC
Confidence 1122233332223458999999999999999987
No 117
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.29 E-value=0.052 Score=52.40 Aligned_cols=92 Identities=14% Similarity=0.144 Sum_probs=62.4
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCC--------HHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhc
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKA 571 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~--------~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 571 (962)
-++.+++.++++.|+++|+++.++|+.. .+...++.+++|+.... ....+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~--~---------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP--H---------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC--C----------------
Confidence 3578999999999999999999999988 77788888888874211 00000 0
Q ss_pred ceEEecCHhhHHHHHHHHh-hCCCEEEEEcC-CcCChhhhhcCCe
Q 044543 572 DGFAGVFPEHKYEIVRKLQ-ERKHICGMTGD-GVNDAPALKKADI 614 (962)
Q Consensus 572 ~v~arvsP~qK~~iV~~lq-~~g~~v~miGD-G~ND~~aLk~AdV 614 (962)
+..-.|+-=..+.+.++ -....++|+|| -.+|+.+-++|++
T Consensus 83 --~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 --CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred --CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 01111222223444442 33467999999 5899999998876
No 118
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.25 E-value=0.017 Score=57.95 Aligned_cols=96 Identities=18% Similarity=0.156 Sum_probs=66.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|++++++|+-.........+++|+... ...++...+.. ...-.|+
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~-----------------~~Kp~~~ 137 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVG-----------------SRKPDPD 137 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSS-----------------SSTTSHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhh-----------------hhhhHHH
Confidence 5789999999999999999999999999999999999998621 11222111100 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG 615 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG 615 (962)
-=..+.+.+.-....+++|||..+|+.+-++|++-
T Consensus 138 ~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 138 AYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 22344444444456799999999999999988873
No 119
>PTZ00174 phosphomannomutase; Provisional
Probab=95.20 E-value=0.019 Score=62.18 Aligned_cols=54 Identities=24% Similarity=0.284 Sum_probs=47.3
Q ss_pred hhHHHHHHHHhhCCCEEEEEcC----CcCChhhhhcC-CeeEEccCchHHHHhcccccc
Q 044543 580 EHKYEIVRKLQERKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARGASDIVL 633 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGD----G~ND~~aLk~A-dVGIamg~gt~~a~~aaDivl 633 (962)
-+|..-++.|.+...-|+++|| |-||.+||+.| -.|++++++.+..+..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4799999999887788999999 99999999987 688999999999998877654
No 120
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=95.15 E-value=0.041 Score=59.53 Aligned_cols=45 Identities=31% Similarity=0.359 Sum_probs=36.2
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHH
Q 044543 580 EHKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDA 624 (962)
Q Consensus 580 ~qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~ 624 (962)
..|..-|+.|+++ + ..|.++||..||.+||..++-||.++++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 5799999998875 2 3577799999999999999999999987766
No 121
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.10 E-value=0.045 Score=58.32 Aligned_cols=99 Identities=11% Similarity=0.025 Sum_probs=65.2
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH-
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP- 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP- 579 (962)
++.+|+.+.++.|++.|+++.++|+-....+...-+..|+.... ..++.+.. +.+-.|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeee-------------------CCCCCCC
Confidence 57899999999999999999999998888888777778874311 11111110 011112
Q ss_pred -hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee--EEccC
Q 044543 580 -EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG--IAVAD 620 (962)
Q Consensus 580 -~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG--Iamg~ 620 (962)
+-=..+.+.+.-....++|+||..+|+.+-++|++. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 211222233332345699999999999999999995 45543
No 122
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.01 E-value=0.049 Score=57.54 Aligned_cols=121 Identities=10% Similarity=0.023 Sum_probs=73.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+|+.+.+++|++. +++.++|+-....+..+-+++|+.... ..++...... ..+-.|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDAG-----------------IQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCccC-----------------CCCCCHH
Confidence 4789999999999999 999999998888888888889885321 1111110000 0111122
Q ss_pred hHHHHHHHH-hhCCCEEEEEcCCc-CChhhhhcCCe-eEEcc--CchHHHHhcccccccCCCchHHHH
Q 044543 581 HKYEIVRKL-QERKHICGMTGDGV-NDAPALKKADI-GIAVA--DATDAARGASDIVLTEPGLSVIVS 643 (962)
Q Consensus 581 qK~~iV~~l-q~~g~~v~miGDG~-ND~~aLk~AdV-GIamg--~gt~~a~~aaDivl~~~~~~~i~~ 643 (962)
-=....+.+ .-....++||||.. +|+.+=+++++ +|.+. ..+......+|+++ ++++.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 112333333 22335699999998 89999999997 44443 22211223456666 44555443
No 123
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=94.86 E-value=0.045 Score=54.76 Aligned_cols=110 Identities=14% Similarity=0.046 Sum_probs=66.3
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
++|+-++.++.+++.+++++++|+--.-....+=..++=-...+...+..... .......-.++-. .....--+
T Consensus 74 Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~---~ih~dg~h~i~~~---~ds~fG~d 147 (220)
T COG4359 74 IDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNND---YIHIDGQHSIKYT---DDSQFGHD 147 (220)
T ss_pred cCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCc---eEcCCCceeeecC---CccccCCC
Confidence 68999999999999999999999876555544444443111111111110000 0000000000000 01122358
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE
Q 044543 582 KYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIA 617 (962)
Q Consensus 582 K~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIa 617 (962)
|...|+.|++....+.|+|||+.|..|-+.+|+=.|
T Consensus 148 K~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 148 KSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 999999999999999999999999988777666444
No 124
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=94.73 E-value=0.08 Score=53.82 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=61.2
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... ..++.+... ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988777 5555557874311 111111000 01111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI 614 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV 614 (962)
-=..+.+.+.-....+.|+||...|+.+-++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 3333444444345679999999999999888877
No 125
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=94.69 E-value=0.16 Score=50.90 Aligned_cols=102 Identities=17% Similarity=0.211 Sum_probs=65.8
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHH---HHHHHh---C--CCCCCCCcccccccchhccCCcchHHHHhhh
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK---ETGRRL---G--MGTNMYPSSALLGQIKDANISALPVDELIEK 570 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~---~ia~~~---G--i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 570 (962)
+|.+.++++++++++++.|+++..+||.....+. ....++ | ++. ...+... +..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~-------g~~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSP-------DRLFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcC-------Ccchhh-hhc
Confidence 4678999999999999999999999999988774 444442 2 321 0111000 000000 000
Q ss_pred cceEEecCHh-hHHHHHHHHhh-----CCCEEEEEcCCcCChhhhhcCCe
Q 044543 571 ADGFAGVFPE-HKYEIVRKLQE-----RKHICGMTGDGVNDAPALKKADI 614 (962)
Q Consensus 571 ~~v~arvsP~-qK~~iV~~lq~-----~g~~v~miGDG~ND~~aLk~AdV 614 (962)
.+. .-.|+ .|.+.++.+++ ....++..||+.+|+.+-++++|
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 111 22343 48888887777 35778889999999999887765
No 126
>PLN02940 riboflavin kinase
Probab=94.60 E-value=0.073 Score=61.45 Aligned_cols=114 Identities=18% Similarity=0.149 Sum_probs=70.1
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHH-HhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR-RLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~-~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
++.+|+.+.++.|++.|+++.++|+-....+...-. ..|+.... ..++.+... ....-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v-----------------~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEV-----------------EKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhc-----------------CCCCCCH
Confidence 367999999999999999999999998887776554 56763211 111111000 0111122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCc--hHHHHhcccccc
Q 044543 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADA--TDAARGASDIVL 633 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~g--t~~a~~aaDivl 633 (962)
+-=..+.+.+.-..+.|+|+||..+|+.|-++|++. |++..+ .......+|.++
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 222233344433456799999999999999999985 444432 222333466655
No 127
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=94.54 E-value=0.05 Score=55.60 Aligned_cols=92 Identities=13% Similarity=0.101 Sum_probs=58.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.++++.|++.|+++.++|+- ..+..+-+.+|+..-. ..++.+.. ..+..|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~-------------------~~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE-------------------VKEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh-------------------CCCCCCC
Confidence 57999999999999999999999986 5566777778874211 11111000 0011222
Q ss_pred hH--HHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 044543 581 HK--YEIVRKLQERKHICGMTGDGVNDAPALKKADIG 615 (962)
Q Consensus 581 qK--~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG 615 (962)
.. ..+.+.+.-....++|+||..+|+.+-++|++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 11 122222222235688999999999999999874
No 128
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.52 E-value=0.081 Score=53.92 Aligned_cols=104 Identities=9% Similarity=-0.029 Sum_probs=66.0
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCC-CHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEec
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV 577 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv 577 (962)
+-++.||+.++++.|+++|+++.++|+- ....+..+-..+|+..... -..+..... ..+.+.-
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd-~iv~~~~ 106 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD-DRIEIYK 106 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce-eeeeccC
Confidence 3457899999999999999999999965 8888888888888741000 000000000 0111111
Q ss_pred CHhhH--HHHHHHHhhC------CCEEEEEcCCcCChhhhhcCCeeEEc
Q 044543 578 FPEHK--YEIVRKLQER------KHICGMTGDGVNDAPALKKADIGIAV 618 (962)
Q Consensus 578 sP~qK--~~iV~~lq~~------g~~v~miGDG~ND~~aLk~AdVGIam 618 (962)
.+..| ..+.+.+.+. -..|+|+||...|+.+-++|++-...
T Consensus 107 ~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 107 PNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred CchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 11112 2344544432 35699999999999999999885443
No 129
>PRK09449 dUMP phosphatase; Provisional
Probab=94.21 E-value=0.11 Score=55.04 Aligned_cols=123 Identities=14% Similarity=0.083 Sum_probs=73.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.++++.|+ .|+++.++|......+...-++.|+.... . .++.+.... ...-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f-d-~v~~~~~~~-----------------~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF-D-LLVISEQVG-----------------VAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc-C-EEEEECccC-----------------CCCCCHH
Confidence 36899999999999 68999999998888888777788874211 0 111110000 0011121
Q ss_pred hHHHHHHHHhhC-CCEEEEEcCCc-CChhhhhcCCee-EEcc-CchH-HHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQER-KHICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~-g~~v~miGDG~-ND~~aLk~AdVG-Iamg-~gt~-~a~~aaDivl~~~~~~~i~~~i 645 (962)
-=..+++.+.-. ...|+||||.. +|+.+-++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 112233333211 24699999998 799999999984 4543 2221 1112467777 5566665543
No 130
>PLN02811 hydrolase
Probab=94.08 E-value=0.13 Score=54.54 Aligned_cols=116 Identities=16% Similarity=0.154 Sum_probs=63.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHH-HHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKE-TGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~-ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
++.+|+.++|+.|++.|+++.++||-....... .-+..++.. .. ..++.+...+ + ....-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~f-~~i~~~~~~~-------~--------~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-LM-HHVVTGDDPE-------V--------KQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-hC-CEEEECChhh-------c--------cCCCCCc
Confidence 468999999999999999999999977653332 222223321 00 0111111000 0 0001112
Q ss_pred hhHHHHHHHHh---hCCCEEEEEcCCcCChhhhhcCCee-EEccCc--hHHHHhcccccc
Q 044543 580 EHKYEIVRKLQ---ERKHICGMTGDGVNDAPALKKADIG-IAVADA--TDAARGASDIVL 633 (962)
Q Consensus 580 ~qK~~iV~~lq---~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~g--t~~a~~aaDivl 633 (962)
+-=...++.+. -....|+||||...|+.|-++|++- |++..+ +......+|+++
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi 200 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVL 200 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHh
Confidence 21123333332 2235699999999999999999983 344322 211222567766
No 131
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=93.87 E-value=0.17 Score=51.66 Aligned_cols=26 Identities=12% Similarity=0.248 Sum_probs=23.8
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCC
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQ 527 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~ 527 (962)
+.|++.+++++|+++|+++.++|.-.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999999999999999999765
No 132
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=93.45 E-value=0.13 Score=50.87 Aligned_cols=96 Identities=17% Similarity=0.151 Sum_probs=57.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCcccccccchhccCCcchHH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVD 565 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 565 (962)
++.||+.++++.|++.|+++.++|.... .....+.+.+|+.....-.... +....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPH-HPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCC-CCCCC---------
Confidence 4789999999999999999999998652 3455667778874210000000 00000
Q ss_pred HHhhhcceEEecCHhhH--HHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe
Q 044543 566 ELIEKADGFAGVFPEHK--YEIVRKLQERKHICGMTGDGVNDAPALKKADI 614 (962)
Q Consensus 566 ~~~~~~~v~arvsP~qK--~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV 614 (962)
...+ .|+-+ ..+++.+.-..+.|.||||...|+.+-++|++
T Consensus 97 -------~~~~-KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi 139 (147)
T TIGR01656 97 -------CSCR-KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGL 139 (147)
T ss_pred -------CCCC-CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCC
Confidence 0000 22211 12222222233569999999999999998887
No 133
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=93.37 E-value=0.089 Score=52.11 Aligned_cols=90 Identities=21% Similarity=0.213 Sum_probs=55.7
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
..+|+.+.++.|++.|+++.++|+-....+...-+.. +... .. .++ +.. ++...-.|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f~-~i~-~~~-----------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-FD-LIL-GSD-----------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-Cc-EEE-ecC-----------------CCCCCcCHHH
Confidence 4579999999999999999999999988888777765 3221 11 111 100 0011111221
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCC
Q 044543 582 KYEIVRKLQERKHICGMTGDGVNDAPALKKAD 613 (962)
Q Consensus 582 K~~iV~~lq~~g~~v~miGDG~ND~~aLk~Ad 613 (962)
=..+.+.+.-.. .|+|+||..+|+.|-++|+
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 122223332234 7999999999998877764
No 134
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=93.26 E-value=0.6 Score=46.46 Aligned_cols=110 Identities=15% Similarity=0.197 Sum_probs=77.1
Q ss_pred HHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh
Q 044543 459 IIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 538 (962)
Q Consensus 459 ~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~ 538 (962)
..+.+..+|+|.+.+-..+ +++..- ....-|++.+=+++++.+|+++.++|.-++.-+...++.+
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 3567888999998775433 333221 1235678888899999999999999999999999999999
Q ss_pred CCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhC---CCEEEEEcCCc-CChhhhhcCCe
Q 044543 539 GMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQER---KHICGMTGDGV-NDAPALKKADI 614 (962)
Q Consensus 539 Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~---g~~v~miGDG~-ND~~aLk~AdV 614 (962)
|++- ++--..|--+ .+-+++++. -..|+||||-. .|+-+=+.|++
T Consensus 84 ~v~f------------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 84 GVPF------------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred CCce------------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 9852 0111123322 455666664 45799999986 68777666655
No 135
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=93.23 E-value=0.2 Score=50.89 Aligned_cols=92 Identities=12% Similarity=0.046 Sum_probs=61.5
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCC-HHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecC
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVF 578 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~-~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs 578 (962)
..+-+++.++++.|++.|+++.++|+-+ ...+..+.+.+|+... .+ ...-.
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~-------~~---------------------~~KP~ 93 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL-------PH---------------------AVKPP 93 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE-------cC---------------------CCCCC
Confidence 3578999999999999999999999987 5777777788876310 00 00011
Q ss_pred HhhHHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCe-eEEcc
Q 044543 579 PEHKYEIVRKLQERKHICGMTGDGV-NDAPALKKADI-GIAVA 619 (962)
Q Consensus 579 P~qK~~iV~~lq~~g~~v~miGDG~-ND~~aLk~AdV-GIamg 619 (962)
|+-=..+.+.+.-....++||||.. .|..+-++|++ +|.+.
T Consensus 94 p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~ 136 (170)
T TIGR01668 94 GCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVE 136 (170)
T ss_pred hHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEc
Confidence 1111122222222345599999998 79999999998 44553
No 136
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=93.00 E-value=0.2 Score=52.22 Aligned_cols=94 Identities=14% Similarity=0.069 Sum_probs=57.0
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++-||+.++++.|++.|+++.++|+-... ....-+.+|+.... ..++..... .+..-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~-----------------~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEV-----------------GAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeeccc-----------------CCCCCCHH
Confidence 57899999999999999999999975543 46666777763211 011100000 00111121
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCe
Q 044543 581 HKYEIVRKLQERKHICGMTGDGV-NDAPALKKADI 614 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~-ND~~aLk~AdV 614 (962)
-=..+.+.+.-....++||||.. +|+.+-++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 11222233322345799999997 89998888875
No 137
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=92.51 E-value=0.5 Score=51.54 Aligned_cols=86 Identities=15% Similarity=0.101 Sum_probs=57.6
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHH---HHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEE
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLA---IAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFA 575 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~---tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 575 (962)
..++-|++.+.++.|++.|+++.++|+.... .....-++.|+...... .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-------------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-------------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-------------------------eEEe
Confidence 3457899999999999999999999997643 33455566787532111 1122
Q ss_pred ecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhh
Q 044543 576 GVFPEHKYEIVRKLQERKHICGMTGDGVNDAPAL 609 (962)
Q Consensus 576 rvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aL 609 (962)
|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 2112245555556655566799999999998654
No 138
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=92.35 E-value=0.19 Score=50.58 Aligned_cols=97 Identities=14% Similarity=0.057 Sum_probs=56.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVD 565 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 565 (962)
++-+++.+++++|++.|+++.++|.- ....+..+-+.+|+.- . ..+.+.... .
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d-~ii~~~~~~----~---- 96 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---D-DVLICPHFP----D---- 96 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---e-EEEECCCCC----C----
Confidence 35689999999999999999999974 2345566677777641 0 011000000 0
Q ss_pred HHhhhcceEEecCHhhH--HHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 044543 566 ELIEKADGFAGVFPEHK--YEIVRKLQERKHICGMTGDGVNDAPALKKADIG 615 (962)
Q Consensus 566 ~~~~~~~v~arvsP~qK--~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG 615 (962)
.+..+| .|.-. ..+.+.+.-....+.||||+.+|+.+-++|++-
T Consensus 97 -----~~~~~~-KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~ 142 (161)
T TIGR01261 97 -----DNCDCR-KPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIR 142 (161)
T ss_pred -----CCCCCC-CCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCe
Confidence 000011 12211 112222221234599999999999999999884
No 139
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=92.31 E-value=0.35 Score=51.59 Aligned_cols=105 Identities=21% Similarity=0.196 Sum_probs=67.3
Q ss_pred CCCccHHHHHHHH--HhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecC
Q 044543 501 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVF 578 (962)
Q Consensus 501 ~lr~~~~~~I~~l--~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs 578 (962)
|+.|+.++.++.+ ++.|+.+.++|.=|.---..+=+.-|+.... ..+.+............+... ...-|.++.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f--~~I~TNpa~~~~~G~l~v~py--h~h~C~~C~ 146 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCF--SEIFTNPACFDADGRLRVRPY--HSHGCSLCP 146 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcccc--ceEEeCCceecCCceEEEeCc--cCCCCCcCC
Confidence 5688999999999 5689999999999988888888888875321 011111000000000000000 012355666
Q ss_pred H-hhHHHHHHHHhhC----C---CEEEEEcCCcCCh-hhh
Q 044543 579 P-EHKYEIVRKLQER----K---HICGMTGDGVNDA-PAL 609 (962)
Q Consensus 579 P-~qK~~iV~~lq~~----g---~~v~miGDG~ND~-~aL 609 (962)
| .=|..+++.+++. | ..|.++|||.||. |++
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 5 4799999988875 4 6899999999996 454
No 140
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=92.24 E-value=0.26 Score=55.94 Aligned_cols=96 Identities=13% Similarity=0.075 Sum_probs=57.4
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchH
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPV 564 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~ 564 (962)
-++.|++.+++++|+++|+++.++|+= ....+..+.+..|+..+ .++.+.... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd----~i~i~~~~~----sd-- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD----EVLICPHFP----ED-- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee----eEEEeCCcC----cc--
Confidence 357899999999999999999999982 13345556666776310 010000000 00
Q ss_pred HHHhhhcceEEecCHhhHHHHHHHH-hh---CCCEEEEEcCCcCChhhhhcCCee
Q 044543 565 DELIEKADGFAGVFPEHKYEIVRKL-QE---RKHICGMTGDGVNDAPALKKADIG 615 (962)
Q Consensus 565 ~~~~~~~~v~arvsP~qK~~iV~~l-q~---~g~~v~miGDG~ND~~aLk~AdVG 615 (962)
+..+| .|+ ..++..+ ++ ....+.||||+.+|..+-+.|++-
T Consensus 99 -------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 99 -------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred -------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 00111 222 2233222 22 236799999999999999988884
No 141
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=92.23 E-value=0.17 Score=54.66 Aligned_cols=65 Identities=17% Similarity=0.169 Sum_probs=47.1
Q ss_pred cCHhhHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcC--------CeeEEccCchHHHHhcccccccCCCchHHHHH
Q 044543 577 VFPEHKYEIVRKLQER----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARGASDIVLTEPGLSVIVSA 644 (962)
Q Consensus 577 vsP~qK~~iV~~lq~~----g~~v~miGDG~ND~~aLk~A--------dVGIamg~gt~~a~~aaDivl~~~~~~~i~~~ 644 (962)
-.+.+|...++.+.++ ...++|+||+.||.+|++.+ ..||+|+.|. .+..|++++ ++...+...
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~--~~~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHL--TGPQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeC--CCHHHHHHH
Confidence 3455788877776553 34789999999999999999 4788886443 355789988 455565555
Q ss_pred H
Q 044543 645 V 645 (962)
Q Consensus 645 i 645 (962)
+
T Consensus 239 L 239 (244)
T TIGR00685 239 L 239 (244)
T ss_pred H
Confidence 4
No 142
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=91.59 E-value=0.21 Score=49.52 Aligned_cols=94 Identities=16% Similarity=0.013 Sum_probs=64.2
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
-++|||+.+.++.|+ .++++.+.|.=....+..+-+.+|+... +...++.+.. +.+.-|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d-------------------~~~~KP 102 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDE-------------------CVFVKG 102 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcc-------------------ccccCC
Confidence 357999999999999 5799999999999999999999887431 1111121111 111112
Q ss_pred hhHHHHHHHHhh---CCCEEEEEcCCcCChhhhhcCCeeEEc
Q 044543 580 EHKYEIVRKLQE---RKHICGMTGDGVNDAPALKKADIGIAV 618 (962)
Q Consensus 580 ~qK~~iV~~lq~---~g~~v~miGDG~ND~~aLk~AdVGIam 618 (962)
. +.+.++. ....|.|+||..+|..|-++|.|-|..
T Consensus 103 ~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 103 K----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred e----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 1 3333433 346799999999999998877665543
No 143
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=91.39 E-value=0.82 Score=49.20 Aligned_cols=94 Identities=17% Similarity=0.230 Sum_probs=59.2
Q ss_pred EEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHH--HHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhc
Q 044543 494 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK--ETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKA 571 (962)
Q Consensus 494 G~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~--~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 571 (962)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. +..+++|+..+. ...++.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-~~~Ii~-------------------- 75 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-PEMIIS-------------------- 75 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-cceEEc--------------------
Confidence 556666788999999999999999999999985544333 455778875311 111111
Q ss_pred ceEEecCHhhHHHHHHHHhh---CCCEEEEEcCCcCChhhhhcCC
Q 044543 572 DGFAGVFPEHKYEIVRKLQE---RKHICGMTGDGVNDAPALKKAD 613 (962)
Q Consensus 572 ~v~arvsP~qK~~iV~~lq~---~g~~v~miGDG~ND~~aLk~Ad 613 (962)
+... ...-+.+.+++ .+..+.++||+.+|...+..++
T Consensus 76 ---s~~~--~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 76 ---SGEI--AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ---cHHH--HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 0000 01122222233 2466999999999998886443
No 144
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=90.84 E-value=0.58 Score=45.14 Aligned_cols=39 Identities=8% Similarity=0.050 Sum_probs=34.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCC-CHHHHHHHHHHhC
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLG 539 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~~G 539 (962)
++.+|+.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777766666
No 145
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=90.68 E-value=0.26 Score=52.04 Aligned_cols=96 Identities=10% Similarity=0.080 Sum_probs=59.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+|++++++.| ++++.++|+.....+...=+..|+..... ..++.+.... ...-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~-~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP-DKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc-ceEeeHHhcC-----------------CCCCChH
Confidence 4568999999988 59999999998888877777788753211 1111111100 0011122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIA 617 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIa 617 (962)
-=....+.+.-....|+|+||..+|+.+=++|++...
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 2222233332233459999999999999999998664
No 146
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=90.19 E-value=1.2 Score=47.43 Aligned_cols=87 Identities=20% Similarity=0.294 Sum_probs=54.2
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHH---HHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAK---ETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG 576 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~---~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 576 (962)
-|+-+++.+.++.|++.|++|+++||....... +--++.|+.. +....+.+. .+ . ..
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~-~d-----~------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGL-ED-----S------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCC-CC-----C------------Cc
Confidence 367899999999999999999999999875422 2234456542 111111110 00 0 00
Q ss_pred cCHhhHHHHHHHHhhCCC-EEEEEcCCcCCh
Q 044543 577 VFPEHKYEIVRKLQERKH-ICGMTGDGVNDA 606 (962)
Q Consensus 577 vsP~qK~~iV~~lq~~g~-~v~miGDG~ND~ 606 (962)
-.-+-|.+.-+.+.+.|+ +++.+||-.+|.
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 001226666667776765 678899998886
No 147
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=90.13 E-value=0.92 Score=59.24 Aligned_cols=114 Identities=15% Similarity=0.194 Sum_probs=75.5
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH--
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP-- 579 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP-- 579 (962)
+-||+.+.++.|+++|+++.++|+-....+..+-++.|+...... .++.+.. +.+..|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~-------------------~~~~KP~P 221 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADA-------------------FENLKPAP 221 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECcc-------------------cccCCCCH
Confidence 578999999999999999999999998888888888888521111 1111110 111122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccC---chHHHHhcccccccC
Q 044543 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVAD---ATDAARGASDIVLTE 635 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~---gt~~a~~aaDivl~~ 635 (962)
+-=....+.+.-....|+|+||..+|+.|-++|++ -|++.. ..+.....+|+++.+
T Consensus 222 e~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~ 281 (1057)
T PLN02919 222 DIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD 281 (1057)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 22223344444345679999999999999999998 455532 233344567888844
No 148
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=89.93 E-value=0.59 Score=49.62 Aligned_cols=98 Identities=12% Similarity=0.061 Sum_probs=62.6
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhC---CCCCCCCcccccccchhccCCcchHHHHhhhcceEE
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG---MGTNMYPSSALLGQIKDANISALPVDELIEKADGFA 575 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~G---i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 575 (962)
.-++.+|+.+++++|+++|+++.++|.........+-+..+ +..- + +... +..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------f--------------~~~f-d~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------F--------------SGYF-DTTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh------c--------------ceEE-EeCccc
Confidence 34689999999999999999999999988776666554442 2110 0 0000 001111
Q ss_pred ecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE
Q 044543 576 GVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIA 617 (962)
Q Consensus 576 rvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIa 617 (962)
.-.|+-=..+.+.+.-....++|+||...|+.|-++|++-..
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 112332234444444344669999999999999999998543
No 149
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=89.92 E-value=0.43 Score=50.00 Aligned_cols=103 Identities=16% Similarity=0.093 Sum_probs=57.8
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHH--HHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEec
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--AKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV 577 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t--A~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv 577 (962)
-++.|++.+.++.|++.|+++.++|...... ........++.... . .++..... ....-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-d-~v~~s~~~-----------------~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-D-AVVESCLE-----------------GLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-C-EEEEeeec-----------------CCCCC
Confidence 3578999999999999999999999865432 22222223332110 0 00000000 00111
Q ss_pred CHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccCc
Q 044543 578 FPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVADA 621 (962)
Q Consensus 578 sP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~g 621 (962)
.|+-=..+.+.+.-....++||||...|+.+=++|++ .|.+..+
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 2222222333333334568999999999999999998 4444443
No 150
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=88.72 E-value=1 Score=45.62 Aligned_cols=40 Identities=8% Similarity=0.029 Sum_probs=31.4
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCH------------HHHHHHHHHhCCC
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQL------------AIAKETGRRLGMG 541 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~------------~tA~~ia~~~Gi~ 541 (962)
+-+|+.+++++|+++|+++.++|.-.. .....+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 348999999999999999999996443 2345667778873
No 151
>PLN02580 trehalose-phosphatase
Probab=87.90 E-value=0.63 Score=53.26 Aligned_cols=67 Identities=24% Similarity=0.199 Sum_probs=47.6
Q ss_pred EecCHh---hHHHHHHHHhhC-C-----C-EEEEEcCCcCChhhhhc-----CCeeEEccCchHHHHhcccccccCCCch
Q 044543 575 AGVFPE---HKYEIVRKLQER-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARGASDIVLTEPGLS 639 (962)
Q Consensus 575 arvsP~---qK~~iV~~lq~~-g-----~-~v~miGDG~ND~~aLk~-----AdVGIamg~gt~~a~~aaDivl~~~~~~ 639 (962)
-.+.|. +|..-|+.+.+. | . .++++||+.||..|++. +++||+|++|.... .|++.| ++-.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L--~dp~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSL--RDPS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEc--CCHH
Confidence 345553 899888877653 2 1 35899999999999996 68999998765422 578888 4455
Q ss_pred HHHHHH
Q 044543 640 VIVSAV 645 (962)
Q Consensus 640 ~i~~~i 645 (962)
.+...+
T Consensus 368 eV~~~L 373 (384)
T PLN02580 368 EVMEFL 373 (384)
T ss_pred HHHHHH
Confidence 555555
No 152
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=87.64 E-value=1.8 Score=43.77 Aligned_cols=105 Identities=16% Similarity=0.192 Sum_probs=73.0
Q ss_pred HHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCc--EEEEcCC-------CHHHHHH
Q 044543 463 FADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVN--VKMITGD-------QLAIAKE 533 (962)
Q Consensus 463 ~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~--v~miTGD-------~~~tA~~ 533 (962)
+...|.|.+.+=... ++ ...=++.+-++..+.+++|++.+.. |.++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 567788887764332 11 1234677889999999999999875 9999976 4788999
Q ss_pred HHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhC-----CCEEEEEcCCc-CChh
Q 044543 534 TGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQER-----KHICGMTGDGV-NDAP 607 (962)
Q Consensus 534 ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~-----g~~v~miGDG~-ND~~ 607 (962)
+.+.+|+.- + .+..-.|.-..++.+.++.+ -+.++||||-. .|+-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999741 0 12233576666788887755 56799999974 4555
Q ss_pred hhhc
Q 044543 608 ALKK 611 (962)
Q Consensus 608 aLk~ 611 (962)
+=..
T Consensus 152 ~gN~ 155 (168)
T PF09419_consen 152 MGNR 155 (168)
T ss_pred Hhhc
Confidence 4333
No 153
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=87.16 E-value=1.5 Score=45.51 Aligned_cols=100 Identities=12% Similarity=0.033 Sum_probs=57.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHH-HHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG-RRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia-~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
++.||+.++++.|++.|+++.++|.-........- +..++.... . .++.... +....|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f-d-~v~~s~~-------------------~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA-D-HIYLSQD-------------------LGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc-C-EEEEecc-------------------cCCCCC
Confidence 46899999999999999999999987655433221 112321100 0 0000000 001112
Q ss_pred --hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCc
Q 044543 580 --EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADA 621 (962)
Q Consensus 580 --~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~g 621 (962)
+==..+.+.+.-....+.|+||...|+.+-++|++- |.+.++
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence 111233333333345689999999999999999884 444443
No 154
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=86.84 E-value=2.4 Score=53.88 Aligned_cols=67 Identities=7% Similarity=0.089 Sum_probs=44.5
Q ss_pred HHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHH-HhCCCcEEEEcCCCHHHHHHHHH
Q 044543 458 TIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIAKETGR 536 (962)
Q Consensus 458 ~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l-~~aGI~v~miTGD~~~tA~~ia~ 536 (962)
..++.|.....|.+++-|.. +|+-.....-.|-+++.+++++| ++.|+.|.++||....+....-.
T Consensus 586 ~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred HHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 34455555555666655533 33321112235667899999997 77899999999999998877664
Q ss_pred H
Q 044543 537 R 537 (962)
Q Consensus 537 ~ 537 (962)
.
T Consensus 653 ~ 653 (854)
T PLN02205 653 P 653 (854)
T ss_pred C
Confidence 4
No 155
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=86.61 E-value=3.1 Score=43.35 Aligned_cols=108 Identities=19% Similarity=0.202 Sum_probs=66.4
Q ss_pred CCCccHHHHHHHHHhCCC-cEEEEcCCCHHHHHHHHHHhCCCC-------CCCCcccccccchhccCCcchHHHHhhhcc
Q 044543 501 PPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGT-------NMYPSSALLGQIKDANISALPVDELIEKAD 572 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~~Gi~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 572 (962)
|.-|+..++|+.+++.|- .++++|--|.---.++-+..|+.+ |.-.... .|.- .+...- ...
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da-~G~L--------~v~pyH-~~h 153 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDA-SGRL--------LVRPYH-TQH 153 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCC-CCcE--------EeecCC-CCC
Confidence 567899999999999997 999999888777777777777632 2100000 0000 000000 112
Q ss_pred eEEecCHh-hHHHHHHHHhhCC-------CEEEEEcCCcCCh-hhhhcCCeeEEc
Q 044543 573 GFAGVFPE-HKYEIVRKLQERK-------HICGMTGDGVNDA-PALKKADIGIAV 618 (962)
Q Consensus 573 v~arvsP~-qK~~iV~~lq~~g-------~~v~miGDG~ND~-~aLk~AdVGIam 618 (962)
-|.++-|. =|..++..++..+ ..+.++|||.||. |+++...--+||
T Consensus 154 sC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~am 208 (256)
T KOG3120|consen 154 SCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAM 208 (256)
T ss_pred ccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceec
Confidence 25555443 4777776665431 2788999999995 777766555566
No 156
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=86.27 E-value=4.6 Score=42.04 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=32.5
Q ss_pred cHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 044543 505 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 541 (962)
Q Consensus 505 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~ 541 (962)
.+.+.+.+|+++|+.|+.+|--....-...-+++|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999998888778888888875
No 157
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=86.12 E-value=1.2e+02 Score=39.51 Aligned_cols=200 Identities=15% Similarity=0.162 Sum_probs=102.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCC-----Ce-EEE----EECCeEEEEECcCcCCCcEEEEeCCCeee
Q 044543 107 QDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLA-----PQ-TKV----LRDGAWREQEASILVPGDVISIKLGDIIP 176 (962)
Q Consensus 107 ~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~-----~~-~~V----~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VP 176 (962)
...+++++.++++.+.++.+++..++..+...+... .+ ..+ +.-|....+...|.+|.|.+.++ |+..=
T Consensus 133 ~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~-g~~l~ 211 (941)
T TIGR01517 133 AILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFIS-GLSLE 211 (941)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEE-cCcEE
Confidence 344556667788888888888877765543432211 12 222 24588999999999999999986 43444
Q ss_pred cceEEEecCCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhh-hccCCCChHHHHHHH
Q 044543 177 ADARLLDGDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQEGHFQKVLTA 255 (962)
Q Consensus 177 aD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~-~~~~~~~~l~~~~~~ 255 (962)
+|=-.+.|++.-++-. .|+.+- -..|..+.+|+...--...|.=+.-|.=. +..... .++.-...+.+..+.
T Consensus 212 VdES~LTGES~pv~K~--~~~~n~--v~~GT~v~~G~~~~iV~~tG~~T~~gki~---~~~~~~~~~t~l~~~~~~~~~~ 284 (941)
T TIGR01517 212 IDESSITGESDPIKKG--APKDSF--LLSGTVVNEGSGRMLVTAVGVNSFGGKLM---MELRAEGEDTPLQEKLSELAGL 284 (941)
T ss_pred EEecccCCCCCccccc--CCCCce--EEeCCeEEeeEEEEEEEEeCCCcHHHHHH---HhhccCCCCCcHHHHHHHHHHH
Confidence 5666666654323221 133221 23466666665332211222222223211 111111 112222233333334
Q ss_pred HHHHHHH---HHHHHHHHHHHHH------------hhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHH
Q 044543 256 IGNFCIC---SIAIGMVIEIIVM------------YPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 314 (962)
Q Consensus 256 i~~~~~~---~i~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~ 314 (962)
+..+.+. ++++..++..+.. .......+..++..+++..-.++|.++++++..+....+
T Consensus 285 ~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~ma 358 (941)
T TIGR01517 285 IGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMM 358 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHH
Confidence 4333221 1111111111110 011223455667777888888999999999998876655
No 158
>PLN03017 trehalose-phosphatase
Probab=84.66 E-value=15 Score=42.02 Aligned_cols=61 Identities=21% Similarity=0.192 Sum_probs=42.8
Q ss_pred hHHHHHHHHhhC-------CCEEEEEcCCcCChhhhhcC-----CeeEEccCchHHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQER-------KHICGMTGDGVNDAPALKKA-----DIGIAVADATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~-------g~~v~miGDG~ND~~aLk~A-----dVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
+|...|+.|.+. +..++++||...|-.|++.. ++||-+|.... ..+|++.| ++.+.+...+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL 355 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFL 355 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHH
Confidence 788888877652 23689999999999999865 46777774221 24688888 4555665555
No 159
>PLN02645 phosphoglycolate phosphatase
Probab=83.21 E-value=2.2 Score=47.77 Aligned_cols=47 Identities=19% Similarity=0.261 Sum_probs=39.0
Q ss_pred EEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHH---HHhCC
Q 044543 494 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG---RRLGM 540 (962)
Q Consensus 494 G~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~~Gi 540 (962)
|.+.-.+.+=+++.++|++|++.|++++++|+....+...+. +++|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 555566777799999999999999999999999977777776 45665
No 160
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=82.86 E-value=1.4 Score=44.95 Aligned_cols=97 Identities=13% Similarity=0.086 Sum_probs=60.3
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+++++|+ .++.++|.-....+...-+.+|+.... . .++........ ..++.-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-d-~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-D-GIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-C-eEEEeecccCc-------------cCCCCCCHH
Confidence 36789999999997 479999998888888888999974311 1 11111000000 000111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG 615 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG 615 (962)
-=..+++.+......++|+||...|+.+=++|++-
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 22344444444556789999999999998888764
No 161
>PHA02597 30.2 hypothetical protein; Provisional
Probab=82.39 E-value=2 Score=44.43 Aligned_cols=97 Identities=12% Similarity=0.078 Sum_probs=55.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCC--CCcccccccchhccCCcchHHHHhhhcceEEecC
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM--YPSSALLGQIKDANISALPVDELIEKADGFAGVF 578 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs 578 (962)
++.||+.+++++|++.+ +.+++|.-+..+....-+.+|+..-. +-..+ +.++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i-----------------------~~~~~~ 129 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEV-----------------------LMCGHD 129 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEE-----------------------EEeccC
Confidence 36899999999999975 66777764444443344556653110 00011 111111
Q ss_pred HhhHHHHHH-HHhhCC-CEEEEEcCCcCChhhhhcC--Cee-EEccCch
Q 044543 579 PEHKYEIVR-KLQERK-HICGMTGDGVNDAPALKKA--DIG-IAVADAT 622 (962)
Q Consensus 579 P~qK~~iV~-~lq~~g-~~v~miGDG~ND~~aLk~A--dVG-Iamg~gt 622 (962)
+. |-++++ .+++.| ..++|+||..+|+.+-++| ++- |.+..|.
T Consensus 130 ~~-kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 130 ES-KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred cc-cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 11 223333 333333 4588999999999999999 884 4444443
No 162
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=82.30 E-value=2.8 Score=47.24 Aligned_cols=91 Identities=14% Similarity=0.075 Sum_probs=65.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH----hCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR----LGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG 576 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~----~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 576 (962)
++.+++.++++.|++.|+++.++|.-+...|..+-+. +|+..... +..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~----------------------------~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD----------------------------ARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee----------------------------EEE
Confidence 4578999999999999999999999999999998877 66532110 111
Q ss_pred cCHhhHHHHHHHH-hh---CCCEEEEEcCCcCChhhhhcCCeeEEcc
Q 044543 577 VFPEHKYEIVRKL-QE---RKHICGMTGDGVNDAPALKKADIGIAVA 619 (962)
Q Consensus 577 vsP~qK~~iV~~l-q~---~g~~v~miGDG~ND~~aLk~AdVGIamg 619 (962)
..+.-|.+.++.+ ++ .-..++|+||...|..+.+++..++.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 1123344434333 22 3467999999999999999998887553
No 163
>PLN03190 aminophospholipid translocase; Provisional
Probab=82.04 E-value=50 Score=43.91 Aligned_cols=116 Identities=8% Similarity=0.064 Sum_probs=79.0
Q ss_pred HHHhhcCCCccCccccchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhh
Q 044543 53 KRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGN 132 (962)
Q Consensus 53 ~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~ 132 (962)
++.+..-+|.+.--+.++|.+|-+...-+|..+.++-.+-.+... ++...+...+.++++..+...++-+..+++.+
T Consensus 90 N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~---~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d~ 166 (1178)
T PLN03190 90 NSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF---GRGASILPLAFVLLVTAVKDAYEDWRRHRSDR 166 (1178)
T ss_pred CeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC---CcchHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 666666677777667788877766544444444444444333321 23457888889999999999999999998887
Q ss_pred HHHHhhcCC---CCeEEE----EECCeEEEEECcCcCCCcEEEEeC
Q 044543 133 AAAALMAGL---APQTKV----LRDGAWREQEASILVPGDVISIKL 171 (962)
Q Consensus 133 ~~~~l~~~~---~~~~~V----~Rdg~~~~i~~~~Lv~GDiI~l~~ 171 (962)
....-.... .....+ ++-|....+...|.+|-|.+.+..
T Consensus 167 ~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~S 212 (1178)
T PLN03190 167 IENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLST 212 (1178)
T ss_pred hhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEec
Confidence 776554331 111222 356888999999999999999973
No 164
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=79.02 E-value=3.5 Score=42.08 Aligned_cols=89 Identities=15% Similarity=0.117 Sum_probs=57.1
Q ss_pred HHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHH
Q 044543 506 SAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEI 585 (962)
Q Consensus 506 ~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~i 585 (962)
..++++.|++. +++.++||.....+..+-++.|+.... ..++...... ..+-.|+-=...
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~~~~~~ 151 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDVQ-----------------HHKPAPDTFLRC 151 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhcc-----------------CCCCChHHHHHH
Confidence 36899999875 899999999999999998999985321 1111111100 111122222233
Q ss_pred HHHHhhCCCEEEEEcCCcCChhhhhcCCe
Q 044543 586 VRKLQERKHICGMTGDGVNDAPALKKADI 614 (962)
Q Consensus 586 V~~lq~~g~~v~miGDG~ND~~aLk~AdV 614 (962)
.+.++-....|.|+||..+|+.+-++|++
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~ 180 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGM 180 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCC
Confidence 33343333458899999999999999987
No 165
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=77.01 E-value=1.4 Score=40.65 Aligned_cols=48 Identities=21% Similarity=0.281 Sum_probs=35.3
Q ss_pred EEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHH---HHhCCC
Q 044543 494 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG---RRLGMG 541 (962)
Q Consensus 494 G~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~~Gi~ 541 (962)
|++.-.+.+=|++.++|+.|+++|++++++|.....+...++ +++|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 445556778899999999999999999999998765544444 556764
No 166
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=69.42 E-value=74 Score=34.20 Aligned_cols=53 Identities=23% Similarity=0.204 Sum_probs=44.3
Q ss_pred CCCCCceEEEEeecCCCCCccHHHHHHHHHhC---CCcEEEEcCCCHHHHHHHHHH
Q 044543 485 SPGGPWQFVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIAKETGRR 537 (962)
Q Consensus 485 ~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~a---GI~v~miTGD~~~tA~~ia~~ 537 (962)
..+.+|.=+=+++=.+-+.||..++|+.++.. |..|+-.+-|++..|++++.-
T Consensus 88 ~~~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 88 ALGTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred HhCCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 34566766777777777899999999999999 999997888899999998765
No 167
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=68.67 E-value=1.5e+02 Score=38.59 Aligned_cols=269 Identities=17% Similarity=0.125 Sum_probs=151.6
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccccchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCC
Q 044543 27 LERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPD 105 (962)
Q Consensus 27 ~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~ 105 (962)
.+-++.+|+.++++.. .+.+..++-.....+ ++.+|...|...+.....+.+.+......+ .+
T Consensus 42 ~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~------------fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 42 TTGLSEEEVKRRLKKYGPNELPEEKKRSLLKK------------FLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred ccCCCHHHHHHHHhhcCCccccccccCcHHHH------------HHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 3356778888888742 444443333222322 333444444444444444444444443111 25
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeE------EE----EECCeEEEEECcCcCCCcEEEEeCCCee
Q 044543 106 WQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQT------KV----LRDGAWREQEASILVPGDVISIKLGDII 175 (962)
Q Consensus 106 ~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~------~V----~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~V 175 (962)
+...+.++++..+.....-++..++-++++++.......- .+ +.-|....+...|.+|-|...|+..+ .
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~-l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD-L 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-c
Confidence 5555556666666668888999888888888866554422 22 34688999999999999999999887 4
Q ss_pred ecceEEEecCCeeEeccc--ccCCCeeee---c---CCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhccCCCC
Q 044543 176 PADARLLDGDPLKIDQSA--LTGESLPVT---K---MPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEG 247 (962)
Q Consensus 176 PaD~~ll~g~~~~Vdes~--LTGEs~pv~---K---~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~ 247 (962)
-+|=-.|.|++.-|+=-. .++|..|.. + ..|..+.+|.-..--...|.-+.-|..+..-+..+. ..+.-..
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~-~~t~l~~ 263 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKE-VKTPLQR 263 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccc-cCCcHHH
Confidence 556666666543222211 122333322 2 347778877744333445555666665543332211 2222223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHH
Q 044543 248 HFQKVLTAIGNFCICSIAIGMVIEIIVM-YPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 314 (962)
Q Consensus 248 ~l~~~~~~i~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~ 314 (962)
.+.+....+..+++++.++..+.. +.. .......+..++..++++.--+.|..+-+++.+....-+
T Consensus 264 ~l~~~~~~l~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~ma 330 (917)
T COG0474 264 KLNKLGKFLLVLALVLGALVFVVG-LFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMA 330 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH
Confidence 344555555555444443333333 333 211234566777788888888999998888888777654
No 168
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=68.48 E-value=7.5 Score=42.29 Aligned_cols=118 Identities=18% Similarity=0.178 Sum_probs=66.3
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhh-----cceEEecC
Q 044543 504 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEK-----ADGFAGVF 578 (962)
Q Consensus 504 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~v~arvs 578 (962)
++..++++.|++.|.++.+.|+.........+...|+. .+-..+.. ..++..-.
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g---------------------~~~~~i~~~~~~~~~~~gKP~ 181 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG---------------------PFVTALEYATDTKATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch---------------------HHHHHHHHHhCCCceeecCCC
Confidence 67888999999999999999886654332222222221 01111110 11122223
Q ss_pred HhhHHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCe-eEEccCch---H---HHHhcccccccCCCchHHHHH
Q 044543 579 PEHKYEIVRKLQERKHICGMTGDGV-NDAPALKKADI-GIAVADAT---D---AARGASDIVLTEPGLSVIVSA 644 (962)
Q Consensus 579 P~qK~~iV~~lq~~g~~v~miGDG~-ND~~aLk~AdV-GIamg~gt---~---~a~~aaDivl~~~~~~~i~~~ 644 (962)
|+-=..+.+.+.-....++|+||.. +|+.+-+++++ +|.+..|. + .....+|+++ +++..+...
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 3322333444433456799999996 89999999988 45554331 1 1123467776 556666543
No 169
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=67.92 E-value=9.1 Score=39.20 Aligned_cols=98 Identities=15% Similarity=0.193 Sum_probs=61.0
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhh------cceEE
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEK------ADGFA 575 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~v~a 575 (962)
+.+++.+++..|+++|.+++|+|- +-||....++....... ..-+.+.+.+ ...+|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rgyf~~~~f~~~-------~~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRGYFTEADFDKL-------HNKMLKILASQGVKIDGILYC 93 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC-----------CCCccccCccHHHHHHH-------HHHHHHHHHHcCCccceEEEC
Confidence 478999999999999999999995 33554433322211100 0001111111 11344
Q ss_pred ecCHhh--------HHHHHHHHhhCC---CEEEEEcCCcCChhhhhcCCeeEEc
Q 044543 576 GVFPEH--------KYEIVRKLQERK---HICGMTGDGVNDAPALKKADIGIAV 618 (962)
Q Consensus 576 rvsP~q--------K~~iV~~lq~~g---~~v~miGDG~ND~~aLk~AdVGIam 618 (962)
.-.|++ ...+.+.+++.+ ....||||-..|..+-.+|+++ ++
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 444543 345666777654 5678999999999999988887 54
No 170
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=67.92 E-value=7.6 Score=41.48 Aligned_cols=89 Identities=20% Similarity=0.194 Sum_probs=54.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHH---HHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEec
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLA---IAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV 577 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~---tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv 577 (962)
++=|++.+.++.+++.|++|..|||.... ...+--++.|.... ....+.+..... ...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~~-----------------~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDPS-----------------KKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESSTS-----------------S--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhccccccccc-----------------ccc
Confidence 44578999999999999999999998743 22333455665321 111111110000 000
Q ss_pred CHhhHHHHHHHHhhCC-CEEEEEcCCcCChhh
Q 044543 578 FPEHKYEIVRKLQERK-HICGMTGDGVNDAPA 608 (962)
Q Consensus 578 sP~qK~~iV~~lq~~g-~~v~miGDG~ND~~a 608 (962)
..+-|...-+.++++| ++++++||-.+|...
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 1234888888888886 578889999999776
No 171
>PRK10444 UMP phosphatase; Provisional
Probab=67.30 E-value=5.5 Score=43.14 Aligned_cols=45 Identities=20% Similarity=0.288 Sum_probs=40.2
Q ss_pred EEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh
Q 044543 494 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 538 (962)
Q Consensus 494 G~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~ 538 (962)
|.+.-.+.+=|++.++|++|++.|++++++||....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999998888888775
No 172
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=66.02 E-value=14 Score=39.25 Aligned_cols=98 Identities=14% Similarity=0.130 Sum_probs=69.8
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
.++.+|+.+.++.|++.|+.+.+.|+-....+..+-..+|+.... ...+.+..... ..-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~~-----------------~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVAR-----------------GKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHhc-----------------CCCCC
Confidence 368999999999999999999999999999999999999986431 11121111110 12224
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE
Q 044543 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI 616 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGI 616 (962)
+-=..-.+.|.-....|..+.|..|.+.|-++|+.-+
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 4444444554444567999999999999999998743
No 173
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=65.95 E-value=27 Score=38.11 Aligned_cols=88 Identities=22% Similarity=0.246 Sum_probs=51.9
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHH----HHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceE
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLA----IAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGF 574 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~----tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ 574 (962)
+.|+=|++.+..+.+++.|++|+.+||.... |..+. ++.|.... ....+.+.. + ..
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~--~~LiLR~~~-D-----~~----------- 202 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTW--EKLILKDPQ-D-----NS----------- 202 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCc--ceeeecCCC-C-----Cc-----------
Confidence 3566789999999999999999999999854 33333 23566421 111111100 0 00
Q ss_pred EecCHhhHHHHHHHHhhCC-CEEEEEcCCcCCh
Q 044543 575 AGVFPEHKYEIVRKLQERK-HICGMTGDGVNDA 606 (962)
Q Consensus 575 arvsP~qK~~iV~~lq~~g-~~v~miGDG~ND~ 606 (962)
..-..+-|...-+.+.+.| .+++.+||-.+|.
T Consensus 203 ~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 203 AENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred cchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 0001233544445555565 4778899999885
No 174
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=65.63 E-value=9.7 Score=41.93 Aligned_cols=41 Identities=10% Similarity=0.073 Sum_probs=37.6
Q ss_pred CC-ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 044543 502 PR-HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 542 (962)
Q Consensus 502 lr-~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~ 542 (962)
+| |++.+++++|+++|+++.++|+-....+.+.-+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999888888889999999964
No 175
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=65.53 E-value=7.4 Score=42.34 Aligned_cols=48 Identities=27% Similarity=0.398 Sum_probs=36.6
Q ss_pred EEeecCCC----CCccHHHHHHHHHhCCCcEEEEcCCCHHHHH---HHHHHhCCC
Q 044543 494 GLLPLFDP----PRHDSAETIRRALNLGVNVKMITGDQLAIAK---ETGRRLGMG 541 (962)
Q Consensus 494 G~i~i~D~----lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~---~ia~~~Gi~ 541 (962)
|.+.-.+. +=|++.++|++|++.|+++.++||....+.. ..-+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555566 7889999999999999999999998766533 334456663
No 176
>PLN02423 phosphomannomutase
Probab=64.72 E-value=9 Score=41.33 Aligned_cols=43 Identities=26% Similarity=0.254 Sum_probs=35.6
Q ss_pred hhHHHHHHHHhhCCCEEEEEcC----CcCChhhhhc-CCeeEEccCchH
Q 044543 580 EHKYEIVRKLQERKHICGMTGD----GVNDAPALKK-ADIGIAVADATD 623 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGD----G~ND~~aLk~-AdVGIamg~gt~ 623 (962)
-+|..-++.|+ ...-|++.|| |-||.+||+. -=.||.+.+=.|
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 37999999999 6778999999 8999999997 666999964333
No 177
>PRK00208 thiG thiazole synthase; Reviewed
Probab=64.63 E-value=1.1e+02 Score=32.85 Aligned_cols=54 Identities=24% Similarity=0.209 Sum_probs=44.5
Q ss_pred CCCCCCceEEEEeecCCCCCccHHHHHHHHHhC---CCcEEEEcCCCHHHHHHHHHH
Q 044543 484 ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIAKETGRR 537 (962)
Q Consensus 484 ~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~a---GI~v~miTGD~~~tA~~ia~~ 537 (962)
|..+.+|.=+=+++=.+-+.+|..++|+.++.. |..|+-.+-|++..|++++.-
T Consensus 87 e~~~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 87 EALGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred HHhCCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 344667777777777777899999999999999 999997777888889888764
No 178
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=64.35 E-value=13 Score=38.56 Aligned_cols=47 Identities=21% Similarity=0.305 Sum_probs=41.1
Q ss_pred eEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH
Q 044543 491 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR 537 (962)
Q Consensus 491 ~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~ 537 (962)
.+-|.+.++|..-|++.|++++|++++.+|+.+|.-..+.-..+.++
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~r 59 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHER 59 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHH
Confidence 56799999999999999999999999999999998877766666554
No 179
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=63.18 E-value=12 Score=40.38 Aligned_cols=48 Identities=6% Similarity=-0.015 Sum_probs=38.8
Q ss_pred EEeecCCCCCccHHHHHHHHHhCCCcEEEEcC---CCHHHHHHHHHHhCCC
Q 044543 494 GLLPLFDPPRHDSAETIRRALNLGVNVKMITG---DQLAIAKETGRRLGMG 541 (962)
Q Consensus 494 G~i~i~D~lr~~~~~~I~~l~~aGI~v~miTG---D~~~tA~~ia~~~Gi~ 541 (962)
|.+.-.+.+=+++.++|++|++.|++++++|| .......+..+++|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 55555666778999999999999999999996 5677777777778874
No 180
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=62.93 E-value=11 Score=41.48 Aligned_cols=41 Identities=5% Similarity=-0.057 Sum_probs=36.4
Q ss_pred CC-ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 044543 502 PR-HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 542 (962)
Q Consensus 502 lr-~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~ 542 (962)
+| |++.+++++|+++|+++.++|+-....+....+.+|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 46 899999999999999999999777777888999999953
No 181
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=61.32 E-value=74 Score=40.36 Aligned_cols=193 Identities=15% Similarity=0.122 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEe-cCCeeEec
Q 044543 113 VVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLD-GDPLKIDQ 191 (962)
Q Consensus 113 ~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~-g~~~~Vde 191 (962)
++++++..+...+.-++..++.+++.++..... . .+.-++-|....|...|.+|=|.++++ |+.+-+|=
T Consensus 59 ~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~-----~-----~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg 128 (755)
T TIGR01647 59 VIILGLLLLNATIGFIEENKAGNAVEALKQSLA-----P-----KARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADC 128 (755)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCC-----C-----eEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceE
Confidence 344444455555666777777777766433221 1 111234588889999999999999997 44455666
Q ss_pred ccccCCCeeeecC--CCCcc----cccceeecceEEEEEEEecchhHHHhH---HHhhhccCCCChHHHHHHHHHHHHHH
Q 044543 192 SALTGESLPVTKM--PGDEV----FSGSTCKQGEIEAVVIATGVHTFFGKA---AHLVDSTNQEGHFQKVLTAIGNFCIC 262 (962)
Q Consensus 192 s~LTGEs~pv~K~--~g~~v----~~Gs~v~~G~~~~~V~~tG~~T~~gki---~~l~~~~~~~~~l~~~~~~i~~~~~~ 262 (962)
-.+.|+..-+.-. .|+.. ..|..+..|....-=..++.-+..|.- .++.+..++..+-...+.+....+..
T Consensus 129 ~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~ 208 (755)
T TIGR01647 129 RLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGL 208 (755)
T ss_pred EEEecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHH
Confidence 6666664333322 13321 245566666533221122222222210 11111111111111122332222222
Q ss_pred HHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Q 044543 263 SIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 315 (962)
Q Consensus 263 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~ 315 (962)
.++.++++..++.+..........+...+...+...-.+.|.+++++...+..
T Consensus 209 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la 261 (755)
T TIGR01647 209 FLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMA 261 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHH
Confidence 22222223222333222111223455566677777788889999998887764
No 182
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=61.03 E-value=12 Score=37.67 Aligned_cols=86 Identities=14% Similarity=0.038 Sum_probs=51.3
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.++++ ++.++|.-+.......-+++|+.... ..++.+... ....-.|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-----------------~~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDTV-----------------RAYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhhc-----------------CCCCCCHH
Confidence 47899999998 36788988888888888888874311 011111100 01111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcC
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKA 612 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~A 612 (962)
-=....+.+.-....|+||||...|+.+-++|
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 11333444443446699999999998776553
No 183
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=60.81 E-value=15 Score=39.24 Aligned_cols=90 Identities=13% Similarity=0.073 Sum_probs=52.2
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++-||+.++++.|++. +++.++|.-+... +..|+.... . .++.... +.+..|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~f-d-~i~~~~~-------------------~~~~KP~ 165 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDYF-E-FVLRAGP-------------------HGRSKPF 165 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHhh-c-eeEeccc-------------------CCcCCCc
Confidence 4568999999999875 8999999855431 456653210 0 0110000 0111122
Q ss_pred --hHHHHHHHHhhCCCEEEEEcCC-cCChhhhhcCCeeEE
Q 044543 581 --HKYEIVRKLQERKHICGMTGDG-VNDAPALKKADIGIA 617 (962)
Q Consensus 581 --qK~~iV~~lq~~g~~v~miGDG-~ND~~aLk~AdVGIa 617 (962)
-=....+.+.-....++||||. ..|+.+=++|++-..
T Consensus 166 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 166 SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEE
Confidence 1112223333234569999999 599999999987443
No 184
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=60.30 E-value=28 Score=41.95 Aligned_cols=40 Identities=15% Similarity=0.126 Sum_probs=32.1
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCH------------HHHHHHHHHhCCC
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQL------------AIAKETGRRLGMG 541 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~------------~tA~~ia~~~Gi~ 541 (962)
+-|+++++++.|++.|+++.++|.=.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997433 3466677777764
No 185
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=60.18 E-value=27 Score=41.82 Aligned_cols=104 Identities=17% Similarity=0.124 Sum_probs=61.8
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH-hCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR-LGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
+++++.+ .+++.|- ++++|+=....+..+|++ +|+.. +.|.+.+...++. +.-.+... ..+.=+
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~-------VIgTeLev~~~G~-~TG~i~g~---~~c~Ge 175 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADK-------VLGTELEVSKSGR-ATGFMKKP---GVLVGD 175 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCE-------EEecccEECcCCE-EeeeecCC---CCCccH
Confidence 4555444 4556774 599999999999999987 89752 1111111000000 00000000 012346
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccC
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVAD 620 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~ 620 (962)
+|.+-++..........+-||..||.|+|+.||-+..++.
T Consensus 176 ~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 176 HKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred HHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 7887776433212223689999999999999999999975
No 186
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=59.58 E-value=43 Score=33.54 Aligned_cols=103 Identities=19% Similarity=0.173 Sum_probs=66.8
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHH---HHHh-----CCCCCCCCcccccccchhccCCcchHHHHhhhc
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKET---GRRL-----GMGTNMYPSSALLGQIKDANISALPVDELIEKA 571 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~i---a~~~-----Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 571 (962)
|..++++.+..+.+++.|.+++-+|+...--|..+ -.+. +++.- .++. +...+-..+ ..
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G----pv~~--------sP~~l~~al-~r 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG----PVLL--------SPDSLFSAL-HR 92 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC----CEEE--------CCcchhhhh-hc
Confidence 68999999999999999999999999985443332 2222 33321 1110 000111100 01
Q ss_pred ceEEecCHhhHHHHHHHHhhC-----CCEEEEEcCCcCChhhhhcCCee
Q 044543 572 DGFAGVFPEHKYEIVRKLQER-----KHICGMTGDGVNDAPALKKADIG 615 (962)
Q Consensus 572 ~v~arvsP~qK~~iV~~lq~~-----g~~v~miGDG~ND~~aLk~AdVG 615 (962)
++..+-.-+.|....+.+++. ....+..|...+|+.+-++++|-
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 233444457899999988864 45788899999999999887663
No 187
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=54.82 E-value=19 Score=36.27 Aligned_cols=90 Identities=27% Similarity=0.365 Sum_probs=62.3
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCH----HHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEec
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQL----AIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV 577 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~----~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv 577 (962)
|++=+++.|..-++.|=++..+||..+ .+++..|+...|. ++.+ .+|+.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~-~m~p-------------------------v~f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHIT-NMNP-------------------------VIFAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccC-CCcc-------------------------eeeccC
Confidence 567778889988999999999999975 3556666666662 2211 234444
Q ss_pred CH-hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEc
Q 044543 578 FP-EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAV 618 (962)
Q Consensus 578 sP-~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIam 618 (962)
.| -.++.-...+|+++. -..-||.-||+-|-|+|++ ||-+
T Consensus 169 k~k~~qy~Kt~~i~~~~~-~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 KPKPGQYTKTQWIQDKNI-RIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCcccccccHHHHhcCc-eEEecCCchhhhHHHhcCccceeE
Confidence 33 123344556676664 4578999999999999988 7765
No 188
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=54.51 E-value=36 Score=35.61 Aligned_cols=96 Identities=13% Similarity=0.174 Sum_probs=58.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++-+++.++++++++. .++.++|--....+....+++||... .......+. +....|+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~v~~s~~--------------------~g~~KP~ 156 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDAVFISED--------------------VGVAKPD 156 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hheEEEecc--------------------cccCCCC
Confidence 4567888999999888 99999998777778888899996432 111111110 1122232
Q ss_pred hHHHHHHHHhhC---CCEEEEEcCCc-CChhhhhcCCe-eEEcc
Q 044543 581 HKYEIVRKLQER---KHICGMTGDGV-NDAPALKKADI-GIAVA 619 (962)
Q Consensus 581 qK~~iV~~lq~~---g~~v~miGDG~-ND~~aLk~AdV-GIamg 619 (962)
.+ -.-..+++. ...++||||.. ||+..-++++. +|-+.
T Consensus 157 ~~-~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~ 199 (229)
T COG1011 157 PE-IFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWIN 199 (229)
T ss_pred cH-HHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEEC
Confidence 22 233333333 45799999975 78454455555 45554
No 189
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=54.18 E-value=14 Score=34.99 Aligned_cols=79 Identities=20% Similarity=0.269 Sum_probs=46.2
Q ss_pred HHHHHHHhcCCeEEEEEeecCC--C-CCCCC---CCCCceEEEEeecCCCCCccHHHHHHHHHhCCCc-EEEEcCCCHHH
Q 044543 458 TIIDKFADRGLRSLAVAEQSVP--E-KTKES---PGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVN-VKMITGDQLAI 530 (962)
Q Consensus 458 ~~i~~~a~~GlR~L~~A~~~~~--~-~~~~~---~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~-v~miTGD~~~t 530 (962)
..++.+.+.|+++..+.-+.-+ . .-+.. ...+..++ +-=-+.+.+++.+++|.+.|++ +|+.+|...+.
T Consensus 18 ~v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDla----vv~~~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~ 93 (116)
T PF13380_consen 18 RVLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLA----VVCVPPDKVPEIVDEAAALGVKAVWLQPGAESEE 93 (116)
T ss_dssp HHHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEE----EE-S-HHHHHHHHHHHHHHT-SEEEE-TTS--HH
T ss_pred HHHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCCEE----EEEcCHHHHHHHHHHHHHcCCCEEEEEcchHHHH
Confidence 4455666689998887644311 0 00111 11222211 1112567899999999999997 99999999999
Q ss_pred HHHHHHHhCC
Q 044543 531 AKETGRRLGM 540 (962)
Q Consensus 531 A~~ia~~~Gi 540 (962)
+.+.|++.|+
T Consensus 94 ~~~~a~~~gi 103 (116)
T PF13380_consen 94 LIEAAREAGI 103 (116)
T ss_dssp HHHHHHHTT-
T ss_pred HHHHHHHcCC
Confidence 9999999987
No 190
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=52.78 E-value=8.5 Score=38.70 Aligned_cols=42 Identities=17% Similarity=0.113 Sum_probs=37.7
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 541 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~ 541 (962)
.=..||++.+.+++|.+. .++.+.|--....|..+...++..
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 335799999999999988 999999999999999999998853
No 191
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=51.39 E-value=3.8e+02 Score=35.59 Aligned_cols=63 Identities=8% Similarity=0.151 Sum_probs=35.2
Q ss_pred hcCCchHHHHHHHHHHhhhch--hccccCC----CCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 680 WKFDFSPFMVLIIAILNDGTI--MTISKDR----VKPSPVPDTWKLKEIFATGIVLGTYLAVMTVLFFW 742 (962)
Q Consensus 680 ~~~~~~p~~il~i~l~~~~~~--~~l~~d~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 742 (962)
+...++.++.+.+.++...+. ...-.++ ....+.-..+.+..++..++++|++...++++.+.
T Consensus 871 ~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~ 939 (1057)
T TIGR01652 871 YNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYI 939 (1057)
T ss_pred HHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 344455555566656543321 1111111 12234555555667788899999988887776654
No 192
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=48.58 E-value=57 Score=37.07 Aligned_cols=106 Identities=15% Similarity=0.146 Sum_probs=64.5
Q ss_pred CccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh-C-------CCCCCCCcccccccchh----------------cc
Q 044543 503 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL-G-------MGTNMYPSSALLGQIKD----------------AN 558 (962)
Q Consensus 503 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~-G-------i~~~~~~~~~l~~~~~~----------------~~ 558 (962)
-|++++++++|+++|+++.++|+-....+..+-+.+ | +.. .. ..++.+.... ..
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~-yF-D~IIt~a~KP~FF~~~~pf~~v~~~~g~ 263 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRD-YF-DVVIVDARKPGFFTEGRPFRQVDVETGS 263 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHh-hC-cEEEeCCCCCcccCCCCceEEEeCCCCc
Confidence 579999999999999999999999999999998886 6 221 11 1122211110 00
Q ss_pred CCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCc-CChhhhh-cCCe
Q 044543 559 ISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGV-NDAPALK-KADI 614 (962)
Q Consensus 559 ~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~-ND~~aLk-~AdV 614 (962)
+....... ++.-.|++.=+-. .+-+.+.-.+..|+++||-. .|+-.-+ .++.
T Consensus 264 ~~~~~~~~-l~~g~vY~gGn~~---~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 264 LKWGEVDG-LEPGKVYSGGSLK---QFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGW 317 (343)
T ss_pred ccCCcccc-ccCCCeEeCCCHH---HHHHHHCCCCCcEEEECCcchHHHHhhHHhcCc
Confidence 00011111 2233355544333 34445556788999999986 5877665 5544
No 193
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=48.03 E-value=19 Score=34.68 Aligned_cols=32 Identities=16% Similarity=0.223 Sum_probs=28.5
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHH
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIA 531 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA 531 (962)
+++.+++.++++++++.|++++.+||......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 67889999999999999999999999987543
No 194
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=47.36 E-value=5.6e+02 Score=34.01 Aligned_cols=214 Identities=14% Similarity=0.180 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEe---cCCee
Q 044543 112 IVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLD---GDPLK 188 (962)
Q Consensus 112 i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~---g~~~~ 188 (962)
-++++++..+.....-++.+++.++|++ +.. ......+ ++-|....+...|.+|=|.++++ |+.+-
T Consensus 196 ~~~i~~i~~~~~~~~~~~~~k~~~~L~~-~~~------~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iP 264 (1054)
T TIGR01657 196 SLCIVFMSSTSISLSVYQIRKQMQRLRD-MVH------KPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKTMP 264 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc------CCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCEec
Confidence 4455566666677777888888877764 221 1112222 34688999999999999999997 54455
Q ss_pred EecccccCCCeeeecC--CCCcc--cc--------c------------ceeecceEEEEEEEe-cchhHHHhHHHhhhcc
Q 044543 189 IDQSALTGESLPVTKM--PGDEV--FS--------G------------STCKQGEIEAVVIAT-GVHTFFGKAAHLVDST 243 (962)
Q Consensus 189 Vdes~LTGEs~pv~K~--~g~~v--~~--------G------------s~v~~G~~~~~V~~t-G~~T~~gki~~l~~~~ 243 (962)
.|=-.+.|+ .-|.=. .|+-. .. | ..+..|.....+... |. |.....+-.+
T Consensus 265 aD~~ll~g~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~----g~~~~vV~~T 339 (1054)
T TIGR01657 265 CDSVLLSGS-CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGD----TGCLAIVVRT 339 (1054)
T ss_pred ceEEEEeCc-EEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCC----CcEEEEEEeC
Confidence 666667774 222211 13321 11 1 112233322221111 11 1111112111
Q ss_pred ---CCCChHH----------HHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHH
Q 044543 244 ---NQEGHFQ----------KVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTM 310 (962)
Q Consensus 244 ---~~~~~l~----------~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~ 310 (962)
...+.+. ...++-...++..+++++++.+++.+. ........+...+...+..+=.+.|.++|+++
T Consensus 340 G~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~-~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ 418 (1054)
T TIGR01657 340 GFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTII-ELIKDGRPLGKIILRSLDIITIVVPPALPAEL 418 (1054)
T ss_pred CccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCcHHHHHHHHHHHHHhhcCchHHHHH
Confidence 1222222 222333322333333222222222221 11111123334445556666778899999999
Q ss_pred HHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEE
Q 044543 311 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV 354 (962)
Q Consensus 311 ~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v 354 (962)
.++.. .+.-.|++-.++|.+-.---|.|+..+
T Consensus 419 ti~l~------------~~~~rL~k~~il~~~~~~ie~lG~v~v 450 (1054)
T TIGR01657 419 SIGIN------------NSLARLKKKGIFCTSPFRINFAGKIDV 450 (1054)
T ss_pred HHHHH------------HHHHHHHHCCEEEcCcccceecceeeE
Confidence 98863 345566777888988887778787765
No 195
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=46.67 E-value=48 Score=36.85 Aligned_cols=138 Identities=16% Similarity=0.157 Sum_probs=75.3
Q ss_pred cCCCCCccHHHHHHHHHhCCCcE---EEEcCCCHHHHH------HHHHHhCCCCCCCCc-------------------cc
Q 044543 498 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIAK------ETGRRLGMGTNMYPS-------------------SA 549 (962)
Q Consensus 498 i~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~tA~------~ia~~~Gi~~~~~~~-------------------~~ 549 (962)
+.++++++.++.|+.+++.|++. .++-||+++... ..|+++||....... ..
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 91 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPS 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 45678889999999998888874 566688876543 357778885421100 00
Q ss_pred ccc----cchhccCC------------------cchHHHHhhhcceEEecCHhhHHHHHHHHhh--CCCEEEEEcCC-cC
Q 044543 550 LLG----QIKDANIS------------------ALPVDELIEKADGFAGVFPEHKYEIVRKLQE--RKHICGMTGDG-VN 604 (962)
Q Consensus 550 l~~----~~~~~~~~------------------~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~--~g~~v~miGDG-~N 604 (962)
+.| .+....++ ...+..+......|.=+||.-=.++++...- .|..|+++|-| .=
T Consensus 92 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~iv 171 (301)
T PRK14194 92 VNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIV 171 (301)
T ss_pred CCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 000 00000111 1112222222233555666655555555432 48999999997 43
Q ss_pred Chh---hhhcCCeeEEcc---Cc-hHHHHhcccccccC
Q 044543 605 DAP---ALKKADIGIAVA---DA-TDAARGASDIVLTE 635 (962)
Q Consensus 605 D~~---aLk~AdVGIamg---~g-t~~a~~aaDivl~~ 635 (962)
=.| +|.+++.-+.+- .. ...+-..||+++.-
T Consensus 172 G~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 172 GKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 333 566666666552 11 22223478999864
No 196
>PTZ00174 phosphomannomutase; Provisional
Probab=46.51 E-value=26 Score=37.74 Aligned_cols=41 Identities=20% Similarity=0.335 Sum_probs=32.4
Q ss_pred EEeecCC-CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHH
Q 044543 494 GLLPLFD-PPRHDSAETIRRALNLGVNVKMITGDQLAIAKET 534 (962)
Q Consensus 494 G~i~i~D-~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~i 534 (962)
|.+.=.| ++-+.+.++|+++++.|+++++.||.+.......
T Consensus 14 GTLL~~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~ 55 (247)
T PTZ00174 14 GTLTKPRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQ 55 (247)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 3333343 4788899999999999999999999998855443
No 197
>PF05975 EcsB: Bacterial ABC transporter protein EcsB; InterPro: IPR010288 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This family consists of several bacterial ABC transporter proteins which are homologous to the EcsB protein of Bacillus subtilis. EcsB is thought to encode a hydrophobic protein with six membrane-spanning helices in a pattern found in other hydrophobic components of ABC transporters [].
Probab=45.66 E-value=5.3e+02 Score=29.76 Aligned_cols=22 Identities=18% Similarity=0.294 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 044543 652 FQRMKNYTIYAVSITIRIVLGF 673 (962)
Q Consensus 652 ~~~i~~~i~~~~~~ni~~~l~~ 673 (962)
.+...||..|.+--++.+++.+
T Consensus 13 ~k~~~kYlr~v~ndh~~l~l~~ 34 (386)
T PF05975_consen 13 WKEQLKYLRYVFNDHFVLYLIF 34 (386)
T ss_pred HHHHHHHHHHHhccHHHHHHHH
Confidence 4455567777665555444433
No 198
>PTZ00445 p36-lilke protein; Provisional
Probab=45.30 E-value=43 Score=35.21 Aligned_cols=64 Identities=13% Similarity=0.176 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEE------------EeecCCCCCccHHHHHHHHHhCCCcE
Q 044543 453 RNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVG------------LLPLFDPPRHDSAETIRRALNLGVNV 520 (962)
Q Consensus 453 ~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG------------~i~i~D~lr~~~~~~I~~l~~aGI~v 520 (962)
.+.....++.+.+.|.|++++=... ++++ ...+--.++|+.++-+++|+++||+|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 3455566778899999998875433 3333 11111237999999999999999999
Q ss_pred EEEcCCCHH
Q 044543 521 KMITGDQLA 529 (962)
Q Consensus 521 ~miTGD~~~ 529 (962)
.++|=-.++
T Consensus 95 ~VVTfSd~~ 103 (219)
T PTZ00445 95 SVVTFSDKE 103 (219)
T ss_pred EEEEccchh
Confidence 999955443
No 199
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=45.04 E-value=5.1e+02 Score=33.54 Aligned_cols=196 Identities=15% Similarity=0.114 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCe------------EEE----EECCeEEEEECcCcCCCcEEEEeCCCe
Q 044543 111 GIVVLLLINSTISFIEENNAGNAAAALMAGLAPQ------------TKV----LRDGAWREQEASILVPGDVISIKLGDI 174 (962)
Q Consensus 111 ~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~------------~~V----~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~ 174 (962)
.+++..+++...++..+ ++.++++++....... ..| +.-|....+...|.+|-|.+.++ |.-
T Consensus 97 iv~~~~~i~~~~e~~a~-ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~-g~~ 174 (867)
T TIGR01524 97 MVLASGLLGFIQESRAE-RAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVIS-ARD 174 (867)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEe-cCc
Confidence 34444445555554443 6666666664432221 222 23477888888889999988886 333
Q ss_pred eecceEEEecCCeeEeccccc--CCCeee-----ecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc-CCC
Q 044543 175 IPADARLLDGDPLKIDQSALT--GESLPV-----TKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQE 246 (962)
Q Consensus 175 VPaD~~ll~g~~~~Vdes~LT--GEs~pv-----~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~ 246 (962)
+=+|=-.+.|++.-|+-..-+ .+..|. .-..|..+.+|+-...=...|.=+..|.=.. .+.. .+.. .-.
T Consensus 175 l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~--~v~~-~~~~t~lq 251 (867)
T TIGR01524 175 LFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAI--AATE-RRGQTAFD 251 (867)
T ss_pred eEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHH--HhhC-CCCCCcHH
Confidence 455666666654333222111 011111 1246777777764433222333333332111 1112 2222 212
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHH
Q 044543 247 GHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAI 312 (962)
Q Consensus 247 ~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~ 312 (962)
..+++....+..+.+.+..+..++..+.. .-+...+..++..+++..-.+.|.++++++..+...
T Consensus 252 ~~~~~i~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~ 316 (867)
T TIGR01524 252 KGVKSVSKLLIRFMLVMVPVVLMINGLMK-GDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAIN 316 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHheehHHHhc-CCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHH
Confidence 23334334443333222222112211111 111234455666677777788888888888887644
No 200
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=43.25 E-value=55 Score=32.13 Aligned_cols=49 Identities=20% Similarity=0.395 Sum_probs=28.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHHHHH
Q 044543 793 LERPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLD 848 (962)
Q Consensus 793 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (962)
...| +|+++++++.+...++..|. +..|.+|.|..+++++....+++.|
T Consensus 33 ~~HP--~L~~~M~~~y~~~~~lm~~s-----py~G~~s~~~ftv~fv~m~~~llfD 81 (155)
T PF10777_consen 33 RNHP--YLCLAMYAAYLAVAALMYYS-----PYFGLGSVWGFTVFFVVMAAFLLFD 81 (155)
T ss_pred HhCc--HHHHHHHHHHHHHHHHHHhc-----chhhhHHHHHHHHHHHHHHHHHHhh
Confidence 3456 67788887766554444442 3344566666665555555555555
No 201
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=42.05 E-value=14 Score=32.69 Aligned_cols=22 Identities=27% Similarity=0.518 Sum_probs=16.7
Q ss_pred EECcCcCCCcEEEE-eCCCeeec
Q 044543 156 QEASILVPGDVISI-KLGDIIPA 177 (962)
Q Consensus 156 i~~~~Lv~GDiI~l-~~Gd~VPa 177 (962)
+.-.+|.+||.|.| ++||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 34568999999998 79999995
No 202
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=41.46 E-value=4.3e+02 Score=34.79 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=20.4
Q ss_pred CCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecC
Q 044543 150 DGAWREQEASILVPGDVISIKLGDIIPADARLLDGD 185 (962)
Q Consensus 150 dg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~ 185 (962)
-|....+...|.+|.|.+.++..+ +=+|=-.|.|+
T Consensus 161 ~GDiv~l~~Gd~IPaD~~il~~~~-l~VdeS~LTGE 195 (997)
T TIGR01106 161 VGDLVEVKGGDRIPADLRIISAQG-CKVDNSSLTGE 195 (997)
T ss_pred CCCEEEECCCCEEeeeEEEEEccC-cEEEccccCCC
Confidence 466677777777777777766432 33444444443
No 203
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=41.14 E-value=90 Score=33.66 Aligned_cols=130 Identities=15% Similarity=0.153 Sum_probs=67.3
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccch---hcc---CCcchHHHHhhhcceE
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIK---DAN---ISALPVDELIEKADGF 574 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~---~~~---~~~~~~~~~~~~~~v~ 574 (962)
.+|+++.+.++.|++.+|.+.+.|+-=-....++=++-|...+. ..++..--. +.. ..++-+.
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~N--v~VvSN~M~Fd~~g~l~gF~~~lIH--------- 158 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPN--VKVVSNFMDFDEDGVLVGFKGPLIH--------- 158 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTT--EEEEEE-EEE-TTSBEEEE-SS------------
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCC--eEEEeeeEEECCcceEeecCCCceE---------
Confidence 47999999999999999999999976666666666666654321 111110000 000 0000000
Q ss_pred EecCHhhHHH-------HHHHHhhCCCEEEEEcCCcCChhhhhcC---CeeEEcc--C-c----hHHHHhcccccccCCC
Q 044543 575 AGVFPEHKYE-------IVRKLQERKHICGMTGDGVNDAPALKKA---DIGIAVA--D-A----TDAARGASDIVLTEPG 637 (962)
Q Consensus 575 arvsP~qK~~-------iV~~lq~~g~~v~miGDG~ND~~aLk~A---dVGIamg--~-g----t~~a~~aaDivl~~~~ 637 (962)
+--|-+ .-+.++. ...|+..||..-|+.|-.-. +.-+.+| + . .+.=+++=||||.+|.
T Consensus 159 ----~~NKn~~~l~~~~~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~ 233 (246)
T PF05822_consen 159 ----TFNKNESALEDSPYFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQ 233 (246)
T ss_dssp ----TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--
T ss_pred ----EeeCCcccccCchHHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCC
Confidence 011111 1123333 34688899999999997655 4444444 2 2 2234567899999987
Q ss_pred chHHHHHHH
Q 044543 638 LSVIVSAVL 646 (962)
Q Consensus 638 ~~~i~~~i~ 646 (962)
=-.++..|.
T Consensus 234 tm~v~~~il 242 (246)
T PF05822_consen 234 TMDVPNAIL 242 (246)
T ss_dssp B-HHHHHHH
T ss_pred CchHHHHHH
Confidence 666665553
No 204
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=40.25 E-value=28 Score=38.30 Aligned_cols=48 Identities=23% Similarity=0.239 Sum_probs=35.6
Q ss_pred EEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHH---HHHHhCCC
Q 044543 494 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKE---TGRRLGMG 541 (962)
Q Consensus 494 G~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~---ia~~~Gi~ 541 (962)
|.+.-.+.+=+++.++|++|++.|+++..+|+....+... --+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4555567778899999999999999999999976443333 23456764
No 205
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=40.00 E-value=1.2e+02 Score=31.06 Aligned_cols=51 Identities=22% Similarity=0.299 Sum_probs=30.9
Q ss_pred hhhcccccccCC-HHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccccchHHHHH
Q 044543 20 IKKENVDLERIP-INEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFL 75 (962)
Q Consensus 20 ~~~~~~~~~~~~-~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l 75 (962)
..+..+|++++. ++++.+++. ...++.+|+.+|+++--.. ++.++.|...+
T Consensus 57 v~~~~~nl~~l~~v~~l~~~~~--~~~~~~~ea~~~L~~I~~~---~~~y~~~~~~l 108 (193)
T PF06738_consen 57 VPPRGVNLDKLAAVNRLSRRIV--AGQLSLEEAIERLDEIDRE---PPRYPPWLVIL 108 (193)
T ss_pred eCCCCcCHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHhhC---CCCCCHHHHHH
Confidence 344556666653 455555544 4789999999999873221 12467665543
No 206
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=39.68 E-value=5.1e+02 Score=33.63 Aligned_cols=198 Identities=11% Similarity=0.058 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCC-----eEEEE-----ECCeEEEEECcCcCCCcEEEEeCCCeeecceEE
Q 044543 112 IVVLLLINSTISFIEENNAGNAAAALMAGLAP-----QTKVL-----RDGAWREQEASILVPGDVISIKLGDIIPADARL 181 (962)
Q Consensus 112 i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~-----~~~V~-----Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~l 181 (962)
+++.++++.+ .-+...++-+++.++...... +...+ .-|....+...|.+|-|.+.++..+ .=+|=-.
T Consensus 90 i~~~~~i~~~-qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~-l~VDES~ 167 (884)
T TIGR01522 90 ILIVVTVGFV-QEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD-LSIDESN 167 (884)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc-eEEEccc
Confidence 3333444444 334445555566655433222 22222 2477888888888888988887432 3355555
Q ss_pred EecCCeeEecccc--cCCC-ee--e---ecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhh-ccCCCChHHHH
Q 044543 182 LDGDPLKIDQSAL--TGES-LP--V---TKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD-STNQEGHFQKV 252 (962)
Q Consensus 182 l~g~~~~Vdes~L--TGEs-~p--v---~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~-~~~~~~~l~~~ 252 (962)
+.|++.-|+=..- .++. .+ - .-..|..+.+|+-..-=...|.=+.-|.=... +.+... .+.-...+.+.
T Consensus 168 LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~--v~~~~~~kt~lq~~l~~l 245 (884)
T TIGR01522 168 LTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKM--MQAIEKPKTPLQKSMDLL 245 (884)
T ss_pred ccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHH--hccCCCCCCcHHHHHHHH
Confidence 5554432222211 1110 00 0 12356666666543322222223333321111 111111 12222234444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHH
Q 044543 253 LTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 314 (962)
Q Consensus 253 ~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~ 314 (962)
...+..+.+.++++..++.++... .+...+..++..+++..-.+.|.++++++.++....+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~a 306 (884)
T TIGR01522 246 GKQLSLVSFGVIGVICLVGWFQGK-DWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMS 306 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHh
Confidence 444444332222222222222221 1123344556667777788888888888888776554
No 207
>PRK11507 ribosome-associated protein; Provisional
Probab=39.30 E-value=33 Score=29.36 Aligned_cols=26 Identities=27% Similarity=0.358 Sum_probs=23.2
Q ss_pred EEEECCeEEEEECcCcCCCcEEEEeC
Q 044543 146 KVLRDGAWREQEASILVPGDVISIKL 171 (962)
Q Consensus 146 ~V~Rdg~~~~i~~~~Lv~GDiI~l~~ 171 (962)
.|..||+.+.-.-..|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 57789999999999999999999854
No 208
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=37.94 E-value=35 Score=37.32 Aligned_cols=46 Identities=22% Similarity=0.214 Sum_probs=39.8
Q ss_pred EEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh
Q 044543 493 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 538 (962)
Q Consensus 493 lG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~ 538 (962)
=|.+.--+.+=|++.++|++|+++|++++.+|--...+....++++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 4788888889999999999999999999999998887777555554
No 209
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=37.00 E-value=2e+02 Score=34.40 Aligned_cols=147 Identities=18% Similarity=0.185 Sum_probs=86.5
Q ss_pred ECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCCCcccccceeecce---------
Q 044543 149 RDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGE--------- 219 (962)
Q Consensus 149 Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~--------- 219 (962)
+-|....+...|.+|-|.+.++. ..=+|--.+.|++.-+.-. .|+. -..|..++.|+....-.
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~--~g~~----v~~gs~~~~G~~~~~v~~~~~~s~~~ 124 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKT--AGDA----VFAGTYVFNGTLIVVVSATGPNTFGG 124 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeec--cCCc----cccCcEEeccEEEEEEEEeccccHHH
Confidence 45888999999999999999866 4556666677765433322 1443 24678888888655322
Q ss_pred EEEEEEEecchhHHHhHHHhhhccCCCChHHHHH-HHHHHHHHHHHHHHHHHHHHHHh-h--ccccchHhHHHHHHHHHH
Q 044543 220 IEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVL-TAIGNFCICSIAIGMVIEIIVMY-P--IQHRAYRNGIDNLLVLLI 295 (962)
Q Consensus 220 ~~~~V~~tG~~T~~gki~~l~~~~~~~~~l~~~~-~~i~~~~~~~i~~~~~~~~~~~~-~--~~~~~~~~~~~~~l~lli 295 (962)
..+.++++|.+|+ ..-.....+.. ..+..+.+.+.++ .++.++..+ . .+...+..++..++...-
T Consensus 125 ~i~~~v~~~~~~k----------~~~~~~~~~~~~~~~~~~~~~la~~-~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P 193 (499)
T TIGR01494 125 KIAVVVYTGFETK----------TPLQPKLDRLSDIIFILFVLLIALA-VFLFWAIGLWDPNSIFKIFLRALILLVIAIP 193 (499)
T ss_pred HHHHHHHhcCCCC----------CchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcccccHHHHHHHHHHHHHHhcC
Confidence 2334456666552 11112222222 3333333222222 222222222 1 123456677888888899
Q ss_pred hccCCchHHHHHHHHHHHH
Q 044543 296 GGIPIAMPTVLSVTMAIGS 314 (962)
Q Consensus 296 ~~iP~aL~~~~~i~~~~~~ 314 (962)
+++|.++|+++..+.....
T Consensus 194 ~aL~~~~~~~~~~~~~~~~ 212 (499)
T TIGR01494 194 IALPLAVTIALAVGDARLA 212 (499)
T ss_pred CcHHHHHHHHHHHHHHHHH
Confidence 9999999999999877655
No 210
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=36.69 E-value=1.3e+02 Score=33.73 Aligned_cols=49 Identities=22% Similarity=0.219 Sum_probs=39.0
Q ss_pred EEEeecCCCCCccHHHHHHHHHhC----CCcEEEEcCCC---H-HHHHHHHHHhCCC
Q 044543 493 VGLLPLFDPPRHDSAETIRRALNL----GVNVKMITGDQ---L-AIAKETGRRLGMG 541 (962)
Q Consensus 493 lG~i~i~D~lr~~~~~~I~~l~~a----GI~v~miTGD~---~-~tA~~ia~~~Gi~ 541 (962)
=|++.-.+++-+++.++++.|+.. |+++..+|-.. . ..+..+.+++|+.
T Consensus 8 DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 8 DGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred cCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 377778889999999999999998 99999999654 3 3355566777863
No 211
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=35.39 E-value=2e+02 Score=30.16 Aligned_cols=146 Identities=16% Similarity=0.249 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHhcCCeEEEEEeecCCCCC-----CCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCH
Q 044543 454 NKAHTIIDKFADRGLRSLAVAEQSVPEKT-----KESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL 528 (962)
Q Consensus 454 ~~~~~~i~~~a~~GlR~L~~A~~~~~~~~-----~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~ 528 (962)
+...+..+.+.+.|.|++=+.++.-...+ .+.... -..+|.=.+-+ .+.++.+.++|-+..+..+++.
T Consensus 22 ~~~~~~~~a~~~gGi~~iEvt~~~~~~~~~i~~l~~~~~~-~~~iGaGTV~~------~~~~~~a~~aGA~fivsp~~~~ 94 (206)
T PRK09140 22 DEALAHVGALIEAGFRAIEIPLNSPDPFDSIAALVKALGD-RALIGAGTVLS------PEQVDRLADAGGRLIVTPNTDP 94 (206)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCccHHHHHHHHHHHcCC-CcEEeEEecCC------HHHHHHHHHcCCCEEECCCCCH
Confidence 44566678888999999988876532111 011111 23455544443 4677888999999999999998
Q ss_pred HHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhh-hcceEEecCHhh--HHHHHHHHhhC---CCEEEEEcCC
Q 044543 529 AIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIE-KADGFAGVFPEH--KYEIVRKLQER---KHICGMTGDG 602 (962)
Q Consensus 529 ~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~v~arvsP~q--K~~iV~~lq~~---g~~v~miGDG 602 (962)
+.+.. ++..|+.- +.| ..+..++.+... .++... +.|.+ ..+.++.+++. .-.+..+| |
T Consensus 95 ~v~~~-~~~~~~~~-------~~G-----~~t~~E~~~A~~~Gad~vk-~Fpa~~~G~~~l~~l~~~~~~~ipvvaiG-G 159 (206)
T PRK09140 95 EVIRR-AVALGMVV-------MPG-----VATPTEAFAALRAGAQALK-LFPASQLGPAGIKALRAVLPPDVPVFAVG-G 159 (206)
T ss_pred HHHHH-HHHCCCcE-------Ecc-----cCCHHHHHHHHHcCCCEEE-ECCCCCCCHHHHHHHHhhcCCCCeEEEEC-C
Confidence 76655 55666531 111 122233333322 223222 44543 24456666653 36688888 7
Q ss_pred cC--ChhhhhcCCe-eEEccCc
Q 044543 603 VN--DAPALKKADI-GIAVADA 621 (962)
Q Consensus 603 ~N--D~~aLk~AdV-GIamg~g 621 (962)
+| +++.+.+|++ |++++++
T Consensus 160 I~~~n~~~~~~aGa~~vav~s~ 181 (206)
T PRK09140 160 VTPENLAPYLAAGAAGFGLGSA 181 (206)
T ss_pred CCHHHHHHHHHCCCeEEEEehH
Confidence 75 6676666654 7887654
No 212
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=35.34 E-value=93 Score=32.76 Aligned_cols=61 Identities=15% Similarity=0.186 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEec
Q 044543 115 LLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDG 184 (962)
Q Consensus 115 ~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g 184 (962)
++++..+..+++.+...++.+.+++....... + .+.-++-|....+...|.+|-|.++++.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~----~~~v~r~~~~~~i~~~~L~~GDiI~l~~ 62 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQ-----K----KVTVIRDGRWQKIPSSELVPGDIIILKA 62 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSS-----E----EEEEEETTEEEEEEGGGT-TTSEEEEET
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCC-----c----cEEEEeccccccchHhhccceeeeeccc
Confidence 34445555556666666666666554332211 1 1122233566667777777777776654
No 213
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=34.38 E-value=5.6e+02 Score=26.72 Aligned_cols=9 Identities=22% Similarity=0.331 Sum_probs=3.7
Q ss_pred cchhHHHHH
Q 044543 794 ERPGLLLIA 802 (962)
Q Consensus 794 ~~~~~~l~~ 802 (962)
.++++|..+
T Consensus 142 ~r~~~~k~~ 150 (206)
T PF06570_consen 142 KRPSWWKYI 150 (206)
T ss_pred cccHHHHHH
Confidence 344444433
No 214
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=33.88 E-value=23 Score=29.92 Aligned_cols=24 Identities=33% Similarity=0.542 Sum_probs=13.8
Q ss_pred EEEECCeEEEEECcCcCCCcEEEE
Q 044543 146 KVLRDGAWREQEASILVPGDVISI 169 (962)
Q Consensus 146 ~V~Rdg~~~~i~~~~Lv~GDiI~l 169 (962)
.|..||+.+.-.-..|.|||+|.+
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HHEETTB----SS----SSEEEEE
T ss_pred ceEECCEEccccCCcCCCCCEEEE
Confidence 366799999999999999999999
No 215
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=33.28 E-value=3.3e+02 Score=25.87 Aligned_cols=45 Identities=20% Similarity=0.271 Sum_probs=28.7
Q ss_pred EEecCHhhHHHHHHHHhhCCCEEEEEcCCcC--ChhhhhcCCeeEEcc
Q 044543 574 FAGVFPEHKYEIVRKLQERKHICGMTGDGVN--DAPALKKADIGIAVA 619 (962)
Q Consensus 574 ~arvsP~qK~~iV~~lq~~g~~v~miGDG~N--D~~aLk~AdVGIamg 619 (962)
+++..+.=-.++++.+.+ =..+...|-|.| |..++++-+|-++-.
T Consensus 43 i~~~~~~~~~~~l~~~~~-Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 43 IVGSGTPLTAEVLEAAPN-LKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp EESTTSTBSHHHHHHHTT--SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred EEcCCCCcCHHHHhccce-eEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 444444222455666633 347889999998 888999888888774
No 216
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=32.58 E-value=33 Score=29.38 Aligned_cols=49 Identities=31% Similarity=0.387 Sum_probs=32.3
Q ss_pred HHHHHhhCCCEEEEEcCC-cCChhhhhcCCe-eEEccCc----hHHH--Hhcccccc
Q 044543 585 IVRKLQERKHICGMTGDG-VNDAPALKKADI-GIAVADA----TDAA--RGASDIVL 633 (962)
Q Consensus 585 iV~~lq~~g~~v~miGDG-~ND~~aLk~AdV-GIamg~g----t~~a--~~aaDivl 633 (962)
..+.+.-....+.||||. ..|+.+=+++++ +|.+..| .+.. ...+|+|+
T Consensus 13 a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv 69 (75)
T PF13242_consen 13 ALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVV 69 (75)
T ss_dssp HHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEE
T ss_pred HHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEE
Confidence 344443334569999999 999999999998 5555322 2221 24778877
No 217
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=32.40 E-value=81 Score=35.00 Aligned_cols=37 Identities=27% Similarity=0.330 Sum_probs=26.4
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCCHHHH-HHHHHHhCC
Q 044543 504 HDSAETIRRALNLGVNVKMITGDQLAIA-KETGRRLGM 540 (962)
Q Consensus 504 ~~~~~~I~~l~~aGI~v~miTGD~~~tA-~~ia~~~Gi 540 (962)
+|+...=+.|+..|.+++++|.+....+ ++..+.++.
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 4666677888899999999998765544 344455555
No 218
>PLN02591 tryptophan synthase
Probab=32.33 E-value=2.1e+02 Score=31.11 Aligned_cols=43 Identities=19% Similarity=0.201 Sum_probs=27.6
Q ss_pred HhhHHHHHHHHhhCCCEEEEEcCCcC---ChhhhhcC-CeeEEccCc
Q 044543 579 PEHKYEIVRKLQERKHICGMTGDGVN---DAPALKKA-DIGIAVADA 621 (962)
Q Consensus 579 P~qK~~iV~~lq~~g~~v~miGDG~N---D~~aLk~A-dVGIamg~g 621 (962)
|++=.+.++.+++....-.++|=|++ |+..+.+. -=|+-+|++
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~~GADGvIVGSa 220 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAGWGADGVIVGSA 220 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHhcCCCEEEECHH
Confidence 55556778888886566677899998 55555443 224555543
No 219
>COG5547 Small integral membrane protein [Function unknown]
Probab=32.15 E-value=2.1e+02 Score=23.45 Aligned_cols=48 Identities=21% Similarity=0.444 Sum_probs=28.3
Q ss_pred HHHhhhhhHH--HHHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 044543 74 FLGFMWNPLS--WVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENN 129 (962)
Q Consensus 74 ~l~~~~~~~~--~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~ 129 (962)
|+++|+-|.. ++.++.|++-+.++ -|-+ +.++++.++...++++.+++
T Consensus 3 flk~fkypIIgglvglliAili~t~G-------fwKt-ilviil~~lGv~iGl~~~r~ 52 (62)
T COG5547 3 FLKKFKYPIIGGLVGLLIAILILTFG-------FWKT-ILVIILILLGVYIGLYKKRT 52 (62)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHH-------HHHH-HHHHHHHHHHHHHHHHHHhh
Confidence 5677777765 34444555544443 4544 34445566677778777765
No 220
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=31.93 E-value=1.8e+02 Score=31.68 Aligned_cols=39 Identities=18% Similarity=0.250 Sum_probs=24.5
Q ss_pred CCCCccHHHHHHHHHhCCCcEE-EEcCCCH-HHHHHHHHHh
Q 044543 500 DPPRHDSAETIRRALNLGVNVK-MITGDQL-AIAKETGRRL 538 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~-miTGD~~-~tA~~ia~~~ 538 (962)
|.+-++..+.++.+++.|++.. +++=..+ +....+++..
T Consensus 123 Dlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 123 DLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred CCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 4455677788888888888744 5555442 3445555554
No 221
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=31.65 E-value=2.5e+02 Score=34.63 Aligned_cols=102 Identities=10% Similarity=0.096 Sum_probs=64.0
Q ss_pred cchHHHHHHhhhhhHHHHHHHHHHHHHHH-HcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhh-cCCCC--
Q 044543 68 ESKVLKFLGFMWNPLSWVMEIAAIMAIAL-ANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALM-AGLAP-- 143 (962)
Q Consensus 68 ~~~~~~~l~~~~~~~~~~l~~~ail~~~l-~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~-~~~~~-- 143 (962)
+..+..-+++|.|.+.+++.+..++-.+. +.......+| +.++.+.++-..++.++++++.+..+.-+ ..+..
T Consensus 96 p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl---~fvl~itl~keavdd~~r~~rd~~~Nse~y~~ltr~~ 172 (1051)
T KOG0210|consen 96 PAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPL---GFVLTITLIKEAVDDLKRRRRDRELNSEKYTKLTRDG 172 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHH---HHHHHHHHHHHHHHHHHHHHhhhhhhhhhheeeccCC
Confidence 44555567788888888877766655431 0000011244 45667778888999999988876654432 22211
Q ss_pred ----eEEEEECCeEEEEECcCcCCCcEEEEeCC
Q 044543 144 ----QTKVLRDGAWREQEASILVPGDVISIKLG 172 (962)
Q Consensus 144 ----~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~G 172 (962)
+..-+.-|....+.-.+=+|-|.|.++.-
T Consensus 173 ~~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTs 205 (1051)
T KOG0210|consen 173 TRREPSSDIKVGDVIIVHKDERVPADMILLRTS 205 (1051)
T ss_pred cccccccccccccEEEEecCCcCCcceEEEEcc
Confidence 12234457788888889999999999743
No 222
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=31.51 E-value=38 Score=23.52 Aligned_cols=15 Identities=47% Similarity=0.609 Sum_probs=13.2
Q ss_pred CCCCCHHHHHHHHhh
Q 044543 43 REGLSNEEGQKRLVI 57 (962)
Q Consensus 43 ~~GLt~~e~~~r~~~ 57 (962)
+.|||.+|+++|++.
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 579999999999875
No 223
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=30.72 E-value=1.3e+03 Score=30.00 Aligned_cols=163 Identities=13% Similarity=0.113 Sum_probs=79.2
Q ss_pred ECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEeccc--ccCCCe-ee----ecCCCCcccccceeecceEE
Q 044543 149 RDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSA--LTGESL-PV----TKMPGDEVFSGSTCKQGEIE 221 (962)
Q Consensus 149 Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~--LTGEs~-pv----~K~~g~~v~~Gs~v~~G~~~ 221 (962)
.-|....+...|.+|-|.+.++.. .+=+|=-.+.|++.-|.-.. ..++.. +. .-..|..+.+|....--...
T Consensus 92 v~GDiv~l~~Gd~IPaD~~ll~~~-~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~t 170 (917)
T TIGR01116 92 VPGDIVELAVGDKVPADIRVLSLK-TLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRT 170 (917)
T ss_pred CCCCEEEECCCCEeeccEEEEEec-ceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEe
Confidence 358889999999999999999765 23345555555443222211 111111 10 12457777777643332233
Q ss_pred EEEEEecchhHHHhHHHhhh-ccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH--------Hhh-ccccchHhHHHHHH
Q 044543 222 AVVIATGVHTFFGKAAHLVD-STNQEGHFQKVLTAIGNFCICSIAIGMVIEIIV--------MYP-IQHRAYRNGIDNLL 291 (962)
Q Consensus 222 ~~V~~tG~~T~~gki~~l~~-~~~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~--------~~~-~~~~~~~~~~~~~l 291 (962)
|.=+..|.-... +...-. .+.-...+.+....+..+.+++.++..++.... .|. .....+..++..++
T Consensus 171 G~~T~~gki~~~--~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v 248 (917)
T TIGR01116 171 GMSTEIGKIRDE--MRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAV 248 (917)
T ss_pred CCCCHHHHHHHH--hhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHhhhh
Confidence 333444431111 111112 222223444544444443222211111111110 011 11123344555667
Q ss_pred HHHHhccCCchHHHHHHHHHHHH
Q 044543 292 VLLIGGIPIAMPTVLSVTMAIGS 314 (962)
Q Consensus 292 ~lli~~iP~aL~~~~~i~~~~~~ 314 (962)
+..-.+.|..+++++.++....+
T Consensus 249 ~~iP~~Lp~~vti~l~~~~~~m~ 271 (917)
T TIGR01116 249 AAIPEGLPAVITTCLALGTRKMA 271 (917)
T ss_pred hccccccHHHHHHHHHHHHHHHH
Confidence 77788899999888888877654
No 224
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=30.62 E-value=2.1e+02 Score=31.26 Aligned_cols=30 Identities=7% Similarity=0.160 Sum_probs=20.3
Q ss_pred HhhHHHHHHHHhhCCCEEEEEcCCcCChhh
Q 044543 579 PEHKYEIVRKLQERKHICGMTGDGVNDAPA 608 (962)
Q Consensus 579 P~qK~~iV~~lq~~g~~v~miGDG~ND~~a 608 (962)
|++-.++++.+++.-..-.++|=|+|+..-
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~ 216 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSEQ 216 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHHH
Confidence 455567788888764455567999985433
No 225
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=30.35 E-value=26 Score=35.56 Aligned_cols=14 Identities=36% Similarity=0.245 Sum_probs=12.6
Q ss_pred EEecccccccCCce
Q 044543 339 LCSDKTGTLTLNKL 352 (962)
Q Consensus 339 i~~DKTGTLT~n~m 352 (962)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999983
No 226
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=29.44 E-value=45 Score=35.68 Aligned_cols=91 Identities=16% Similarity=0.132 Sum_probs=49.8
Q ss_pred CccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhh---h-cceEEecC
Q 044543 503 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIE---K-ADGFAGVF 578 (962)
Q Consensus 503 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~-~~v~arvs 578 (962)
-++..++++.|++.|++. ++|......+.......|.. .+...++ . ...+..-.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g---------------------~~~~~i~~~g~~~~~~gKP~ 197 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG---------------------YYAELIKQLGGKVIYSGKPY 197 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc---------------------HHHHHHHHhCCcEecCCCCC
Confidence 478889999998899997 77876554443322222221 0111110 0 00112222
Q ss_pred HhhHHHHHHHHhhC-CCEEEEEcCC-cCChhhhhcCCee
Q 044543 579 PEHKYEIVRKLQER-KHICGMTGDG-VNDAPALKKADIG 615 (962)
Q Consensus 579 P~qK~~iV~~lq~~-g~~v~miGDG-~ND~~aLk~AdVG 615 (962)
|+-=..+.+.+... ...++|+||. .+|..+=++|++-
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGID 236 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence 22222333444322 3469999999 5999998888763
No 227
>PRK09479 glpX fructose 1,6-bisphosphatase II; Reviewed
Probab=29.07 E-value=1.4e+02 Score=33.10 Aligned_cols=104 Identities=25% Similarity=0.338 Sum_probs=58.8
Q ss_pred eecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH-hCCCCCCCCcccc--cccchhccCCcchHHHHhhhcc
Q 044543 496 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR-LGMGTNMYPSSAL--LGQIKDANISALPVDELIEKAD 572 (962)
Q Consensus 496 i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~ 572 (962)
+.+-|+||++ +.|+++|++|.+|+++|--...-|...+.. .|+ ..+ .|...+..+....+. +..-+
T Consensus 161 V~vLdRpRH~--~lI~eiR~~Gari~Li~DGDVa~ai~~~~~~s~v-------D~~~GiGGaPEGVlaAaAlk--clGG~ 229 (319)
T PRK09479 161 VVVLDRPRHE--ELIAEIREAGARVKLISDGDVAGAIATAFPDTGV-------DILMGIGGAPEGVLAAAALK--CLGGE 229 (319)
T ss_pred EEEEcCchHH--HHHHHHHHcCCeEEEeccccHHHHHHHhcCCCCe-------eEEEEcCcChHHHHHHHHHH--hcCce
Confidence 4566888874 899999999999999996566666665521 111 111 111111110000111 11224
Q ss_pred eEEecCHhhHHHHHHHHhh---------------CCCEEEEEcCCcCChhhhh
Q 044543 573 GFAGVFPEHKYEIVRKLQE---------------RKHICGMTGDGVNDAPALK 610 (962)
Q Consensus 573 v~arvsP~qK~~iV~~lq~---------------~g~~v~miGDG~ND~~aLk 610 (962)
+.+|.-|....+.-+..+. +|.-|.++.-|+.|-..|+
T Consensus 230 mqgRL~~~~~~e~~r~~~~Gi~D~~kv~~~~dLv~gddv~F~ATGVTdG~lL~ 282 (319)
T PRK09479 230 MQGRLLPRNEEERARAKKMGITDLDKVLTLDDLVRGDDVIFAATGVTDGDLLK 282 (319)
T ss_pred eEEeECCCCHHHHHHHHHcCCcChhheeEHHHcccCCCEEEEEeCCCCCCCcC
Confidence 5677766554433332221 2346889999999999987
No 228
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=28.91 E-value=1.4e+03 Score=29.73 Aligned_cols=88 Identities=16% Similarity=0.115 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEEC-cCcCCCcEEEEeCCCeeecceEEEec-CC
Q 044543 109 FVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEA-SILVPGDVISIKLGDIIPADARLLDG-DP 186 (962)
Q Consensus 109 ~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~-~~Lv~GDiI~l~~Gd~VPaD~~ll~g-~~ 186 (962)
+..-++++++..+-.++..+...|+.+++.++..... .+-..+.- ++-.-|....|...|.+|=|.++++. +.
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~-----~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~ 196 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVS-----NTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDM 196 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-----CeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCE
Confidence 3333444444555556666677777777766443221 11111111 00001567888888888888888864 33
Q ss_pred eeEecccccCCCeee
Q 044543 187 LKIDQSALTGESLPV 201 (962)
Q Consensus 187 ~~Vdes~LTGEs~pv 201 (962)
+-+|=-.+.|+..-+
T Consensus 197 IPaDg~li~g~~l~V 211 (902)
T PRK10517 197 IPADLRILQARDLFV 211 (902)
T ss_pred EeeeEEEEEcCceEE
Confidence 555666666665433
No 229
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=28.83 E-value=93 Score=31.61 Aligned_cols=40 Identities=20% Similarity=0.223 Sum_probs=31.8
Q ss_pred CCccHHHHHHHHHhCCCcEEEEc-CCCHHHHHHHHHHhCCC
Q 044543 502 PRHDSAETIRRALNLGVNVKMIT-GDQLAIAKETGRRLGMG 541 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miT-GD~~~tA~~ia~~~Gi~ 541 (962)
+-||+++.++.|++.|+++.+.| -|.+..|+++=+.+++.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 56899999999999999999999 58899999999999987
No 230
>TIGR02854 spore_II_GA sigma-E processing peptidase SpoIIGA. Members of this protein family are the stage II sporulation protein SpoIIGA. This protein acts as an activating protease for Sigma-E, one of several specialized sigma factors of the sporulation process in Bacillus subtilis and related endospore-forming bacteria.
Probab=28.48 E-value=3.7e+02 Score=29.78 Aligned_cols=25 Identities=16% Similarity=0.360 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 832 WVGVIWLYSIVFYIPLDVLKFIVRY 856 (962)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~K~~~r~ 856 (962)
|..+++.+.+++++....++++.++
T Consensus 127 ~~~l~~~~~~~~~~~~~~~~~i~~~ 151 (288)
T TIGR02854 127 WKFILIGFPILYYFVKRRMDAIRDR 151 (288)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333345556666666667766554
No 231
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.07 E-value=1.5e+02 Score=32.85 Aligned_cols=138 Identities=14% Similarity=0.187 Sum_probs=72.7
Q ss_pred cCCCCCccHHHHHHHHHhC-CCcE---EEEcCCCHHHH------HHHHHHhCCCCCCCCcc-------------------
Q 044543 498 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAIA------KETGRRLGMGTNMYPSS------------------- 548 (962)
Q Consensus 498 i~D~lr~~~~~~I~~l~~a-GI~v---~miTGD~~~tA------~~ia~~~Gi~~~~~~~~------------------- 548 (962)
+.+.+|.+.++.++.+++. |++. .++.||+++.. ...|+++||........
T Consensus 10 ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~ 89 (284)
T PRK14179 10 LAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDP 89 (284)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456778888888888776 6663 46778876543 45577888854211000
Q ss_pred cccc----cchhccCC------------------cchHHHHhhhcceEEecCHhhHHHHHHHHhh--CCCEEEEEcC-Cc
Q 044543 549 ALLG----QIKDANIS------------------ALPVDELIEKADGFAGVFPEHKYEIVRKLQE--RKHICGMTGD-GV 603 (962)
Q Consensus 549 ~l~~----~~~~~~~~------------------~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~--~g~~v~miGD-G~ 603 (962)
.+.| .+.....+ ...+..+......|.=+||.-=.++++...- .|..++++|- |+
T Consensus 90 ~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~i 169 (284)
T PRK14179 90 TWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNI 169 (284)
T ss_pred CCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 0000 00000111 1112222222233555667665555554432 4899999999 55
Q ss_pred CChh---hhhcCCeeEEc--cCc--hHHHHhcccccccC
Q 044543 604 NDAP---ALKKADIGIAV--ADA--TDAARGASDIVLTE 635 (962)
Q Consensus 604 ND~~---aLk~AdVGIam--g~g--t~~a~~aaDivl~~ 635 (962)
-=.| +|.+++.-+.+ ... ....-..||+++.-
T Consensus 170 vG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 170 VGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred CcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 5444 45556555555 222 12223479999854
No 232
>PF03419 Peptidase_U4: Sporulation factor SpoIIGA This family belongs to family U4 of the peptidase classification.; InterPro: IPR005081 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This group of peptidases belong to the MEROPS peptidase family U4 (SpoIIGA peptidase family, clan U-). Sporulation in bacteria such as Bacillus subtilis involves the formation of a polar septum, which divides the sporangium into a mother cell and a forespore. The sigma E factor, which is encoded within the spoIIG operon, is a cell-specific regulatory protein that directs gene transcription in the mother cell. Sigma E is synthesised as an inactive proprotein pro-sigma E, which is converted to the mature factor by the putative processing enzyme SpoIIGA []. ; GO: 0004190 aspartic-type endopeptidase activity, 0006508 proteolysis, 0030436 asexual sporulation
Probab=27.81 E-value=5.1e+02 Score=28.66 Aligned_cols=28 Identities=18% Similarity=0.438 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 044543 832 WVGVIWLYSIVFYIPLDVLKFIVRYALT 859 (962)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~K~~~r~~~~ 859 (962)
|..++....+.+++....++++.++...
T Consensus 126 ~~~l~~~~~~~~~~~~~~~~~i~~~~~~ 153 (293)
T PF03419_consen 126 WLFLLIGFIIAYLLLKRLWKYIKRRRIK 153 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3333334445555555677777665443
No 233
>PF15584 Imm44: Immunity protein 44
Probab=27.62 E-value=29 Score=31.14 Aligned_cols=19 Identities=37% Similarity=0.457 Sum_probs=16.1
Q ss_pred CCcEEEEeCCCeeecceEE
Q 044543 163 PGDVISIKLGDIIPADARL 181 (962)
Q Consensus 163 ~GDiI~l~~Gd~VPaD~~l 181 (962)
+.+-..|+.|++|||||+-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 4566789999999999986
No 234
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=27.57 E-value=2.1e+02 Score=29.05 Aligned_cols=67 Identities=18% Similarity=0.091 Sum_probs=45.5
Q ss_pred eEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHH-HhcccccccCCCchHHHHHHHHHHHH
Q 044543 573 GFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAA-RGASDIVLTEPGLSVIVSAVLTSRAI 651 (962)
Q Consensus 573 v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a-~~aaDivl~~~~~~~i~~~i~~gR~~ 651 (962)
.+.=-+|++=...++.+++.|. -+.+|++. ..+.| +.--..++...+..+|..++.+++++
T Consensus 105 ~~~~~~~~e~~~~i~~~~~~G~-~viVGg~~-----------------~~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i 166 (176)
T PF06506_consen 105 IYPYDSEEEIEAAIKQAKAEGV-DVIVGGGV-----------------VCRLARKLGLPGVLIESGEESIRRALEEALRI 166 (176)
T ss_dssp EEEESSHHHHHHHHHHHHHTT---EEEESHH-----------------HHHHHHHTTSEEEESS--HHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcCC-cEEECCHH-----------------HHHHHHHcCCcEEEEEecHHHHHHHHHHHHHH
Confidence 4555578888889999998884 44677652 12333 33456778888899999999999998
Q ss_pred HHHHHH
Q 044543 652 FQRMKN 657 (962)
Q Consensus 652 ~~~i~~ 657 (962)
++..++
T Consensus 167 ~~~~~~ 172 (176)
T PF06506_consen 167 ARARRR 172 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887654
No 235
>cd01573 modD_like ModD; Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase) present in some modABC operons in bacteria, which are involved in molybdate transport. In general, QPRTases are part of the de novo synthesis pathway of NAD in both prokaryotes and eukaryotes. They catalyse the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide.
Probab=27.47 E-value=2.8e+02 Score=30.52 Aligned_cols=57 Identities=26% Similarity=0.342 Sum_probs=38.6
Q ss_pred EEecCHhhHHHHHHHHhhC--CCEEEEEcCCcC--ChhhhhcCCe-eEEccCchHHHHhcccccc
Q 044543 574 FAGVFPEHKYEIVRKLQER--KHICGMTGDGVN--DAPALKKADI-GIAVADATDAARGASDIVL 633 (962)
Q Consensus 574 ~arvsP~qK~~iV~~lq~~--g~~v~miGDG~N--D~~aLk~AdV-GIamg~gt~~a~~aaDivl 633 (962)
+.+++|++=.++++.+++. .-.+.++| |+| +++.+.++++ +|+++.-+. |+ ..|+.+
T Consensus 209 ld~~~p~~l~~~~~~~~~~~~~i~i~AsG-GI~~~ni~~~~~~Gvd~I~vsai~~-a~-~~D~s~ 270 (272)
T cd01573 209 LDKFSPEELAELVPKLRSLAPPVLLAAAG-GINIENAAAYAAAGADILVTSAPYY-AK-PADIKV 270 (272)
T ss_pred ECCCCHHHHHHHHHHHhccCCCceEEEEC-CCCHHHHHHHHHcCCcEEEEChhhc-Cc-ccceEE
Confidence 5577888877888887764 35677888 775 6677777776 665555444 43 566543
No 236
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=26.28 E-value=1.6e+03 Score=29.35 Aligned_cols=196 Identities=14% Similarity=0.051 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCC------------eEEE----EECCeEEEEECcCcCCCcEEEEeCCCe
Q 044543 111 GIVVLLLINSTISFIEENNAGNAAAALMAGLAP------------QTKV----LRDGAWREQEASILVPGDVISIKLGDI 174 (962)
Q Consensus 111 ~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~------------~~~V----~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~ 174 (962)
.++++..+...+.-+...++.++++++...... ...| +.-|....+...|.+|-|.+.++.+ -
T Consensus 119 ~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~-~ 197 (903)
T PRK15122 119 TMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESR-D 197 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcC-c
Confidence 333444444445555555666666666443221 1222 2358889999999999999888743 3
Q ss_pred eecceEEEecCCeeEecccc------------cCCCee-----eecCCCCcccccceeecceEEEEEEEecchhHHHhHH
Q 044543 175 IPADARLLDGDPLKIDQSAL------------TGESLP-----VTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAA 237 (962)
Q Consensus 175 VPaD~~ll~g~~~~Vdes~L------------TGEs~p-----v~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~ 237 (962)
+=+|=-.+.|++.-|+-... .++..+ -.-..|..+.+|+-...-...|.=+..|.=.. ..
T Consensus 198 l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~---~v 274 (903)
T PRK15122 198 LFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAK---SI 274 (903)
T ss_pred eEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHHHH---Hh
Confidence 45565566665433333321 122111 12356788888875433223333333332221 11
Q ss_pred Hhhhcc-C---CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHH
Q 044543 238 HLVDST-N---QEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIG 313 (962)
Q Consensus 238 ~l~~~~-~---~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~ 313 (962)
..-+.. . +-.++.+.+..++.++.+++++.. .+.. .-+...+..++..+++..-.+.|.++++++..+....
T Consensus 275 ~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~---~~~~-~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m 350 (903)
T PRK15122 275 VGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLIN---GFTK-GDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM 350 (903)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhh---hhcc-CCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 111111 1 113345555554433332222211 1111 1112334455666777777888888888888765443
Q ss_pred H
Q 044543 314 S 314 (962)
Q Consensus 314 ~ 314 (962)
+
T Consensus 351 a 351 (903)
T PRK15122 351 A 351 (903)
T ss_pred H
Confidence 3
No 237
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=26.12 E-value=1.7e+02 Score=29.55 Aligned_cols=57 Identities=12% Similarity=0.163 Sum_probs=42.3
Q ss_pred chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCH
Q 044543 449 REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL 528 (962)
Q Consensus 449 ~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~ 528 (962)
+-....-+..+++.++..|=-.++++... =-+.+-++|+.+++.|++|+-+||.+-
T Consensus 92 Dy~yd~vFsRqveA~g~~GDvLigISTSG------------------------NS~nVl~Ai~~Ak~~gm~vI~ltG~~G 147 (176)
T COG0279 92 DYGYDEVFSRQVEALGQPGDVLIGISTSG------------------------NSKNVLKAIEAAKEKGMTVIALTGKDG 147 (176)
T ss_pred cccHHHHHHHHHHhcCCCCCEEEEEeCCC------------------------CCHHHHHHHHHHHHcCCEEEEEecCCC
Confidence 33444556777888888886666665432 135789999999999999999999885
Q ss_pred H
Q 044543 529 A 529 (962)
Q Consensus 529 ~ 529 (962)
.
T Consensus 148 G 148 (176)
T COG0279 148 G 148 (176)
T ss_pred c
Confidence 4
No 238
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.06 E-value=1.9e+02 Score=32.15 Aligned_cols=45 Identities=20% Similarity=0.282 Sum_probs=31.0
Q ss_pred cCCCCCccHHHHHHHHHhC-CCcE---EEEcCCCHHH------HHHHHHHhCCCC
Q 044543 498 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAI------AKETGRRLGMGT 542 (962)
Q Consensus 498 i~D~lr~~~~~~I~~l~~a-GI~v---~miTGD~~~t------A~~ia~~~Gi~~ 542 (962)
+..+++++.++.++.+++. |++. .++-||++.. -...|+++||..
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~ 64 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMAS 64 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 3456778888888888876 7763 5556877653 345677888853
No 239
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.01 E-value=2e+02 Score=31.95 Aligned_cols=45 Identities=13% Similarity=0.200 Sum_probs=32.1
Q ss_pred cCCCCCccHHHHHHHHHhC-CCc---EEEEcCCCHHHH------HHHHHHhCCCC
Q 044543 498 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIA------KETGRRLGMGT 542 (962)
Q Consensus 498 i~D~lr~~~~~~I~~l~~a-GI~---v~miTGD~~~tA------~~ia~~~Gi~~ 542 (962)
+.++++++.++-|+.+++. |++ +.++.||+++.. ...|+++||..
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNS 63 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEE
Confidence 3456788888899998877 766 467778887543 44577888854
No 240
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=25.61 E-value=4.3e+02 Score=24.63 Aligned_cols=44 Identities=14% Similarity=0.224 Sum_probs=20.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEE
Q 044543 106 WQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLR 149 (962)
Q Consensus 106 ~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~R 149 (962)
|...+++++++++.-.+.+.-.+|+++..+++.+.+.+-.+|+-
T Consensus 18 ~~~ll~lvii~~i~yf~~~RpqkK~~k~~~~~~~~Lk~Gd~VvT 61 (106)
T PRK05585 18 LSSLLPLVVFFAIFYFLIIRPQQKRQKEHKKMLSSLAKGDEVVT 61 (106)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 44444333333322233333455555666666665555555543
No 241
>PLN02151 trehalose-phosphatase
Probab=25.15 E-value=83 Score=35.88 Aligned_cols=61 Identities=20% Similarity=0.172 Sum_probs=42.7
Q ss_pred hHHHHHHHHhhC-C------CEEEEEcCCcCChhhhhcC-----CeeEEccCchHHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQER-K------HICGMTGDGVNDAPALKKA-----DIGIAVADATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~-g------~~v~miGDG~ND~~aLk~A-----dVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
+|...|+.+.+. + ..++++||-..|-.|++.. ++||-+|.+.. ...|++.| ++-..+...+
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L--~dp~eV~~~L 341 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSL--QEPDEVMEFL 341 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeC--CCHHHHHHHH
Confidence 899988887654 1 2589999999999998853 67777764321 22688888 4455555555
No 242
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=24.75 E-value=98 Score=30.90 Aligned_cols=41 Identities=17% Similarity=0.100 Sum_probs=37.1
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 541 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~ 541 (962)
=.+||++.+.+++|++. +++.+.|.=....|..+.+.++..
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 35799999999999955 999999999999999999999865
No 243
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=24.66 E-value=1.2e+02 Score=30.59 Aligned_cols=82 Identities=18% Similarity=0.285 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCc---EEEEcCCCHHH
Q 044543 454 NKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVN---VKMITGDQLAI 530 (962)
Q Consensus 454 ~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~---v~miTGD~~~t 530 (962)
++..+-++++...|.+++.++-.. + .....-..-+|+=.+.---+|-...--+.|++.++. |+|+ ||+.-|
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSNn~--e---~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmV-GDqL~T 122 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSNNK--E---SRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMV-GDQLFT 122 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCC--H---HHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEE-cchhhh
Confidence 345566788899999999887532 1 111111122444444445566666666667777774 7777 999999
Q ss_pred HHHHHHHhCCC
Q 044543 531 AKETGRRLGMG 541 (962)
Q Consensus 531 A~~ia~~~Gi~ 541 (962)
=.--|.+.|+-
T Consensus 123 DVlggnr~G~~ 133 (175)
T COG2179 123 DVLGGNRAGMR 133 (175)
T ss_pred hhhcccccCcE
Confidence 99999999984
No 244
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=24.50 E-value=1.9e+02 Score=24.68 Aligned_cols=33 Identities=21% Similarity=0.143 Sum_probs=24.6
Q ss_pred CCeEEEEECCeEEEEEC---cCcCCCcEEEEeCCCe
Q 044543 142 APQTKVLRDGAWREQEA---SILVPGDVISIKLGDI 174 (962)
Q Consensus 142 ~~~~~V~Rdg~~~~i~~---~~Lv~GDiI~l~~Gd~ 174 (962)
...+.|-.+|..++++. .++.|||.|.+..|--
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~A 51 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGFA 51 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTEE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecChh
Confidence 45678888999999864 4578999999999843
No 245
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=24.06 E-value=1.6e+02 Score=33.12 Aligned_cols=150 Identities=17% Similarity=0.129 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHhcCCeEEEEEeecCCCCC--------CCCCCCCceEEEEeecCCCCCccH--HHHHHHHHhCCCc-
Q 044543 451 DVRNKAHTIIDKFADRGLRSLAVAEQSVPEKT--------KESPGGPWQFVGLLPLFDPPRHDS--AETIRRALNLGVN- 519 (962)
Q Consensus 451 ~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~--------~~~~e~~l~llG~i~i~D~lr~~~--~~~I~~l~~aGI~- 519 (962)
..-+...++++-+.+.|++-+.++.|..+-.. .+..+-+| -+|++---....--+ .-.|-.|...||-
T Consensus 148 amveSAl~~v~~le~~~F~diviS~KsSdv~~~i~ayr~la~~~dyPL-HlGVTEAG~~~~G~IKSaigig~LL~~GIGD 226 (346)
T TIGR00612 148 AMVQSALEEAAILEKLGFRNVVLSMKASDVAETVAAYRLLAERSDYPL-HLGVTEAGMGVKGIVKSSAGIGILLARGIGD 226 (346)
T ss_pred HHHHHHHHHHHHHHHCCCCcEEEEEEcCCHHHHHHHHHHHHhhCCCCc-eeccccCCCCCCchhHHHHHHHHHHhhCCCC
Confidence 34455666777788889988888887643211 11122222 355554433333333 3456778888883
Q ss_pred -E-EEEcCCCH---HHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh---hHHHHHHHHhh
Q 044543 520 -V-KMITGDQL---AIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE---HKYEIVRKLQE 591 (962)
Q Consensus 520 -v-~miTGD~~---~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~---qK~~iV~~lq~ 591 (962)
+ +=+|+|.. .+|.+|-+.||+-...... + .+.-|+|+.-+ .=.++-+.|++
T Consensus 227 TIRVSLT~dP~~EV~va~~IL~slglr~~g~~i--i-------------------SCPtCGR~~~dl~~~~~~ve~~l~~ 285 (346)
T TIGR00612 227 TIRVSLTDDPTHEVPVAFEILQSLGLRARGVEI--V-------------------ACPSCGRTGFDVEKVVRRVQEALFH 285 (346)
T ss_pred eEEEECCCCcHHHHHHHHHHHHHcCCCcCCCeE--E-------------------ECCCCCCcCCCHHHHHHHHHHHHhc
Confidence 3 34789875 4778888999986432111 0 01224444311 11233334443
Q ss_pred --CCCEEEEEcCCcCChhhhhcCCeeEEcc-Cch
Q 044543 592 --RKHICGMTGDGVNDAPALKKADIGIAVA-DAT 622 (962)
Q Consensus 592 --~g~~v~miGDG~ND~~aLk~AdVGIamg-~gt 622 (962)
..-.|+..|==+|-..--+.||+|||-| .|.
T Consensus 286 ~~~~l~VAVMGCvVNGPGEak~ADiGIaggg~g~ 319 (346)
T TIGR00612 286 LKTPLKVAVMGCVVNGPGEAKHADIGISGGGTGS 319 (346)
T ss_pred CCCCCEEEEECceecCCchhhccCeeeecCCCCc
Confidence 3568999999999999999999999987 553
No 246
>PRK05742 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=23.76 E-value=2.7e+02 Score=30.73 Aligned_cols=171 Identities=13% Similarity=0.116 Sum_probs=90.9
Q ss_pred CCCEEEEEeCcHHHHHHHh-------ccchHHHHHHHHHHHHHHhcCCeEEEEEeec-CCCCCC---------CCCCCCc
Q 044543 428 DGSWHRISKGAPEQIIELC-------NLREDVRNKAHTIIDKFADRGLRSLAVAEQS-VPEKTK---------ESPGGPW 490 (962)
Q Consensus 428 ~g~~~~~~KGa~e~il~~~-------~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~-~~~~~~---------~~~e~~l 490 (962)
.|....-.+|....++..- .+-..+.....+.++... +..+..+..|. .|.-.. --....+
T Consensus 80 ~g~~i~~i~G~~~~ll~~ER~~ln~l~~~SGIAT~T~~~v~~~~--~~~~~i~~TRKt~Pg~R~~~k~Av~~GGg~~HR~ 157 (277)
T PRK05742 80 ANQVLFHLEGPARSLLTGERSALNFLQLLSGVATRARHYADLVA--GTQVKLLDTRKTLPGLRLAQKYAVTCGGCHNHRI 157 (277)
T ss_pred CCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCeEEEecCCCCCchhHHHHHHHHhcCCccccC
Confidence 3666778899988876421 111223334444444443 34343334443 332110 0001112
Q ss_pred eEEEEeecCCCC---CccHHHHHHHHHhCC-CcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHH
Q 044543 491 QFVGLLPLFDPP---RHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDE 566 (962)
Q Consensus 491 ~llG~i~i~D~l---r~~~~~~I~~l~~aG-I~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~ 566 (962)
-+-..+-+.|.= -.++.++++.+|+.. -+.+-++-++.+-+.+.. +.|.+
T Consensus 158 ~L~d~ilikdnHi~~~g~v~~av~~~r~~~~~~~I~VEv~tleea~eA~-~~gaD------------------------- 211 (277)
T PRK05742 158 GLYDAFLIKENHIAACGGIAQAVAAAHRIAPGKPVEVEVESLDELRQAL-AAGAD------------------------- 211 (277)
T ss_pred CCcccEEecHHHHHHhCCHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HcCCC-------------------------
Confidence 222223333331 134566677777653 134666667766665533 34421
Q ss_pred HhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcC--ChhhhhcCCe-eEEccCchHHHHhcccccc
Q 044543 567 LIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVN--DAPALKKADI-GIAVADATDAARGASDIVL 633 (962)
Q Consensus 567 ~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~N--D~~aLk~AdV-GIamg~gt~~a~~aaDivl 633 (962)
.-.+-.++|++=.++++.++ ..-.+.+.| |+| +++.+.+++| +|++|.-+.-++ +.|+.+
T Consensus 212 ----~I~LD~~~~e~l~~~v~~~~-~~i~leAsG-GIt~~ni~~~a~tGvD~Isvg~lt~s~~-~~D~sl 274 (277)
T PRK05742 212 ----IVMLDELSLDDMREAVRLTA-GRAKLEASG-GINESTLRVIAETGVDYISIGAMTKDVK-AVDLSM 274 (277)
T ss_pred ----EEEECCCCHHHHHHHHHHhC-CCCcEEEEC-CCCHHHHHHHHHcCCCEEEEChhhcCCc-ccceee
Confidence 11245778998888888764 245677888 887 6678888887 788886554444 566654
No 247
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.84 E-value=1.4e+02 Score=33.00 Aligned_cols=45 Identities=16% Similarity=0.268 Sum_probs=33.2
Q ss_pred cCCCCCccHHHHHHHHHhCCCcE---EEEcCCCHHHH------HHHHHHhCCCC
Q 044543 498 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIA------KETGRRLGMGT 542 (962)
Q Consensus 498 i~D~lr~~~~~~I~~l~~aGI~v---~miTGD~~~tA------~~ia~~~Gi~~ 542 (962)
+.+.++++.++.++.+++.|++. .++-||+++.. ...|+++||..
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~ 64 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMIS 64 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 45667888999999998888874 55679887644 34577888854
No 248
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=22.73 E-value=7.7e+02 Score=29.99 Aligned_cols=70 Identities=14% Similarity=0.172 Sum_probs=48.8
Q ss_pred cHHHHHHHHHhCCCcEEEEcCCCH-HHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHH
Q 044543 505 DSAETIRRALNLGVNVKMITGDQL-AIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKY 583 (962)
Q Consensus 505 ~~~~~I~~l~~aGI~v~miTGD~~-~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~ 583 (962)
|+-.++..+++.+=++.+++=.+. ..+..++.-+++. ...+.-.++++=.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~-----------------------------i~~~~~~~~~e~~ 145 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR-----------------------------IEQRSYVTEEDAR 145 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-----------------------------eEEEEecCHHHHH
Confidence 466677777777777777766553 3445555555542 2457778899999
Q ss_pred HHHHHHhhCCCEEEEEcCCcC
Q 044543 584 EIVRKLQERKHICGMTGDGVN 604 (962)
Q Consensus 584 ~iV~~lq~~g~~v~miGDG~N 604 (962)
..|+.++++|..| ++||++-
T Consensus 146 ~~v~~lk~~G~~~-vvG~~~~ 165 (538)
T PRK15424 146 GQINELKANGIEA-VVGAGLI 165 (538)
T ss_pred HHHHHHHHCCCCE-EEcCchH
Confidence 9999999999655 6798753
No 249
>cd01516 FBPase_glpX Bacterial fructose-1,6-bisphosphatase, glpX-encoded. A dimeric enzyme dependent on Mg(2+). glpX-encoded FPBase (FBPase class II) differs from other members of the inositol-phosphatase superfamily by permutation of secondary structure elements. The core structure around the active site is well preserved. In E. coli, FBPase II is part of the glp regulon, which mediates growth on glycerol or sn-glycerol 3-phosphate as the sole carbon source.
Probab=22.66 E-value=2.3e+02 Score=31.42 Aligned_cols=38 Identities=32% Similarity=0.496 Sum_probs=29.3
Q ss_pred eecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHH
Q 044543 496 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG 535 (962)
Q Consensus 496 i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia 535 (962)
+.+-|+||+ .+.|+++|++|.+|+++|--....|...+
T Consensus 158 V~vLdRpRH--~~lI~eiR~~Gari~Li~DGDV~~ai~~~ 195 (309)
T cd01516 158 VVVLDRPRH--AALIEEIREAGARIKLIPDGDVAAAIATA 195 (309)
T ss_pred EEEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHh
Confidence 456688887 48999999999999999955555555544
No 250
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=22.52 E-value=99 Score=28.43 Aligned_cols=30 Identities=20% Similarity=0.407 Sum_probs=23.9
Q ss_pred EEEEECCeEEEEECcCcCCCcEEEEeCCCee
Q 044543 145 TKVLRDGAWREQEASILVPGDVISIKLGDII 175 (962)
Q Consensus 145 ~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~V 175 (962)
-+|.-||+.. -++.++++||+|.|.-|...
T Consensus 34 GrV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 34 GRVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred CeEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 3566677766 79999999999999888643
No 251
>PF10011 DUF2254: Predicted membrane protein (DUF2254); InterPro: IPR018723 Members of this family of proteins comprises various hypothetical and putative membrane proteins. Their exact function, has not, as yet, been defined.
Probab=22.44 E-value=1.2e+03 Score=26.73 Aligned_cols=26 Identities=15% Similarity=0.296 Sum_probs=16.2
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHh
Q 044543 792 FLERPGLLLIAAFIIAQLVATLIAVY 817 (962)
Q Consensus 792 ~~~~~~~~l~~~~~~~~~~~~~~~~~ 817 (962)
|.+.+..+.+++++++.++..++...
T Consensus 88 f~~d~~~q~vLg~Figtfvy~l~~l~ 113 (371)
T PF10011_consen 88 FMRDRVTQVVLGTFIGTFVYSLLVLI 113 (371)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 45566667777777776666555443
No 252
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.02 E-value=1.6e+02 Score=32.57 Aligned_cols=45 Identities=16% Similarity=0.254 Sum_probs=34.0
Q ss_pred cCCCCCccHHHHHHHHHhCCCc---EEEEcCCCHHHH------HHHHHHhCCCC
Q 044543 498 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIA------KETGRRLGMGT 542 (962)
Q Consensus 498 i~D~lr~~~~~~I~~l~~aGI~---v~miTGD~~~tA------~~ia~~~Gi~~ 542 (962)
+.++++++.++-|+.+++.|++ +.++.||+++.. ...|+++|+..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456788899999999988886 567779987644 44578889854
No 253
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=21.61 E-value=1.3e+02 Score=28.16 Aligned_cols=37 Identities=19% Similarity=0.279 Sum_probs=28.1
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCC
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM 540 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi 540 (962)
=-+++.++++.+++.|++++.+|++.+ -...+.+-|.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 346889999999999999999999874 2334554453
No 254
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=21.32 E-value=4.8e+02 Score=29.41 Aligned_cols=54 Identities=22% Similarity=0.139 Sum_probs=45.5
Q ss_pred CCCCCCceEEEEeecCCCCCccHHHHHHHHHhC---CCcEEEEcCCCHHHHHHHHHH
Q 044543 484 ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIAKETGRR 537 (962)
Q Consensus 484 ~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~a---GI~v~miTGD~~~tA~~ia~~ 537 (962)
|..+.+|.=+=+++=..-+-+|..++++.++.. |..|...+-|++.+|++++.-
T Consensus 161 e~~~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 161 EAGGWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred HhcCCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 344667777777777777899999999999999 999988999999999998764
No 255
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.32 E-value=1.7e+02 Score=32.31 Aligned_cols=45 Identities=13% Similarity=0.213 Sum_probs=33.0
Q ss_pred cCCCCCccHHHHHHHHHhCCCc---EEEEcCCCHHHH------HHHHHHhCCCC
Q 044543 498 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIA------KETGRRLGMGT 542 (962)
Q Consensus 498 i~D~lr~~~~~~I~~l~~aGI~---v~miTGD~~~tA------~~ia~~~Gi~~ 542 (962)
+..+++++.++.++.+++.|++ +.++-||+++.. ...|+++|+..
T Consensus 9 va~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14169 9 VSKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 3456788899999999888876 466778887544 34577888854
No 256
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=20.93 E-value=1.1e+02 Score=28.73 Aligned_cols=78 Identities=15% Similarity=0.263 Sum_probs=53.4
Q ss_pred HHHhcCCeEEEEEeecCCCCC--CCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCC-cE-EEEcCCCHHHHHHHHHH
Q 044543 462 KFADRGLRSLAVAEQSVPEKT--KESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGV-NV-KMITGDQLAIAKETGRR 537 (962)
Q Consensus 462 ~~a~~GlR~L~~A~~~~~~~~--~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI-~v-~miTGD~~~tA~~ia~~ 537 (962)
-+...|++|+.+... +|.++ ....+.+..++|+-...++--+.+++.++.+|+.+- ++ +++-|-....-.+.+++
T Consensus 22 ~l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~~ 100 (119)
T cd02067 22 ALRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLKE 100 (119)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHHH
Confidence 456789999776633 33322 112345667888888877777999999999999976 44 67777654443457777
Q ss_pred hCC
Q 044543 538 LGM 540 (962)
Q Consensus 538 ~Gi 540 (962)
.|.
T Consensus 101 ~G~ 103 (119)
T cd02067 101 IGV 103 (119)
T ss_pred cCC
Confidence 775
No 257
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=20.83 E-value=2e+02 Score=31.49 Aligned_cols=42 Identities=21% Similarity=0.281 Sum_probs=35.4
Q ss_pred CCceEEEEeecCCCCCccHHHHHHHHHhCCCc-EEEEcCCCHH
Q 044543 488 GPWQFVGLLPLFDPPRHDSAETIRRALNLGVN-VKMITGDQLA 529 (962)
Q Consensus 488 ~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~-v~miTGD~~~ 529 (962)
.++..+--+...|.-|.+..+.+..++.+||+ +..+|||.+.
T Consensus 57 ~g~~~i~Hlt~r~~n~~~l~~~L~~~~~~Gi~nvL~l~GD~~~ 99 (272)
T TIGR00676 57 TGIPTVPHLTCIGATREEIREILREYRELGIRHILALRGDPPK 99 (272)
T ss_pred cCCCeeEEeeecCCCHHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 35666777888888899999999999999997 6669999874
No 258
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=20.74 E-value=1.2e+02 Score=26.78 Aligned_cols=13 Identities=38% Similarity=0.491 Sum_probs=0.0
Q ss_pred CcCCCcEEEEeCC
Q 044543 160 ILVPGDVISIKLG 172 (962)
Q Consensus 160 ~Lv~GDiI~l~~G 172 (962)
+|+|||-|....|
T Consensus 36 ~Lk~Gd~VvT~gG 48 (82)
T PF02699_consen 36 SLKPGDEVVTIGG 48 (82)
T ss_dssp -------------
T ss_pred cCCCCCEEEECCc
Confidence 3445554444433
No 259
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=20.69 E-value=2.7e+02 Score=29.94 Aligned_cols=105 Identities=13% Similarity=0.092 Sum_probs=57.0
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHH
Q 044543 504 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKY 583 (962)
Q Consensus 504 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~ 583 (962)
++..++++.||+.|..+.++|-=... ...+=..+|+... . +-++...+.....++..+- .
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~-f-D~vv~S~e~g~~KPDp~If-----------------~ 175 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAY-F-DFVVESCEVGLEKPDPRIF-----------------Q 175 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHh-h-hhhhhhhhhccCCCChHHH-----------------H
Confidence 44559999999999888888743222 2245555666421 1 1111111111111122222 2
Q ss_pred HHHHHHhhCCCEEEEEcCC-cCChhhhhcCCe-eEEccCchHHHHhc
Q 044543 584 EIVRKLQERKHICGMTGDG-VNDAPALKKADI-GIAVADATDAARGA 628 (962)
Q Consensus 584 ~iV~~lq~~g~~v~miGDG-~ND~~aLk~AdV-GIamg~gt~~a~~a 628 (962)
..++.+.-+-.-|+++||. .||..+-+.++. +|=+.++..+.++.
T Consensus 176 ~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~ 222 (237)
T KOG3085|consen 176 LALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKEL 222 (237)
T ss_pred HHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhh
Confidence 3334444445569999997 599998887776 45555555544433
No 260
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=20.49 E-value=1.1e+02 Score=28.97 Aligned_cols=79 Identities=15% Similarity=0.135 Sum_probs=54.3
Q ss_pred HHHhcCCeEEEEEeecCCCCC--CCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCC-cE-EEEcCCCHHHHHHHHHH
Q 044543 462 KFADRGLRSLAVAEQSVPEKT--KESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGV-NV-KMITGDQLAIAKETGRR 537 (962)
Q Consensus 462 ~~a~~GlR~L~~A~~~~~~~~--~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI-~v-~miTGD~~~tA~~ia~~ 537 (962)
-+...|++++.+.-.. |.++ ....+.+-.++++-.......+.+++.++.|++.|. ++ +++-|..+.--.+-.++
T Consensus 22 ~l~~~G~~vi~lG~~v-p~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~ 100 (122)
T cd02071 22 ALRDAGFEVIYTGLRQ-TPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKE 100 (122)
T ss_pred HHHHCCCEEEECCCCC-CHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHH
Confidence 4677899998887643 2221 111244557888888888899999999999999987 44 56666555444555668
Q ss_pred hCCC
Q 044543 538 LGMG 541 (962)
Q Consensus 538 ~Gi~ 541 (962)
.|+.
T Consensus 101 ~G~d 104 (122)
T cd02071 101 MGVA 104 (122)
T ss_pred CCCC
Confidence 8864
No 261
>PRK12415 fructose 1,6-bisphosphatase II; Reviewed
Probab=20.31 E-value=2.7e+02 Score=31.18 Aligned_cols=106 Identities=18% Similarity=0.177 Sum_probs=57.6
Q ss_pred eecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccc--cccchhccCCcchHHHHhhhcce
Q 044543 496 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL--LGQIKDANISALPVDELIEKADG 573 (962)
Q Consensus 496 i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~v 573 (962)
+.+-|+||+ .+.|+++|++|.+|++++--....|...+. +... ...+ .|...+..++...+. +..-.+
T Consensus 159 V~vLdRpRH--~~lI~eir~~Gari~Li~DGDV~~ai~~~~----~~~~--vD~~~GiGGaPEGVlaAaAlk--clGG~~ 228 (322)
T PRK12415 159 VIVQERERH--QDIIDRVRAKGARVKLFGDGDVGASIATAL----PGTG--IDLFVGIGGAPEGVISAAALK--CLGGEM 228 (322)
T ss_pred EEEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHhC----CCCC--eeEEEEcCCChHHHHHHHHHH--hCCcee
Confidence 456688887 489999999999999999555555555442 2111 1111 111111111000111 012235
Q ss_pred EEecCHhhHHHHHHHHhh---------------CCCEEEEEcCCcCChhhhhc
Q 044543 574 FAGVFPEHKYEIVRKLQE---------------RKHICGMTGDGVNDAPALKK 611 (962)
Q Consensus 574 ~arvsP~qK~~iV~~lq~---------------~g~~v~miGDG~ND~~aLk~ 611 (962)
.+|..|....+.-+..+. +|.-|.++.-|+.|-..|+-
T Consensus 229 q~rL~~~~~~e~~r~~~~Gi~D~~~v~~~ddlv~gd~v~FaATGvTdG~ll~G 281 (322)
T PRK12415 229 QARLVPMNEEEEARCREMGLEDPRQLLMLDDLVSGDDAIFSATGVSAGELLDG 281 (322)
T ss_pred EEEECCCCHHHHHHHHHcCCcChhheeEHHHccCCCCEEEEEeCCCCCCCcCC
Confidence 667665443332222211 25568899999999998873
No 262
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=20.21 E-value=1e+02 Score=32.88 Aligned_cols=34 Identities=29% Similarity=0.347 Sum_probs=27.2
Q ss_pred EEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCC
Q 044543 494 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 527 (962)
Q Consensus 494 G~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~ 527 (962)
|++.-.+.+=+++.++|+.+++.|++++++|...
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~ 40 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNS 40 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCC
Confidence 4444456666799999999999999999999443
No 263
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=20.06 E-value=2e+02 Score=25.01 Aligned_cols=47 Identities=13% Similarity=0.275 Sum_probs=37.0
Q ss_pred EeecCCCCCccHHHHHHHHHhCCCcEEE-EcCCCHHHHHHHHHHhCCC
Q 044543 495 LLPLFDPPRHDSAETIRRALNLGVNVKM-ITGDQLAIAKETGRRLGMG 541 (962)
Q Consensus 495 ~i~i~D~lr~~~~~~I~~l~~aGI~v~m-iTGD~~~tA~~ia~~~Gi~ 541 (962)
++++.+..++.+.+..+.||+.|++|.+ ..+.+..--..-|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3445567788889999999999999988 5666777777778888864
Done!