BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044545
MVCGKRSSKCLKCCCGITSILLIIVLIVLIILFFTLFKPKEPKITAKPVDLEKINLLFFP
TIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSL
TIFADKLISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQI
IDSVCESKVEL

High Scoring Gene Products

Symbol, full name Information P value
AT3G54200 protein from Arabidopsis thaliana 7.6e-25
AT2G46150 protein from Arabidopsis thaliana 2.7e-13
AT3G05975 protein from Arabidopsis thaliana 1.2e-12
AT4G13270 protein from Arabidopsis thaliana 6.1e-09
AT1G64065 protein from Arabidopsis thaliana 2.5e-05
AT3G44380 protein from Arabidopsis thaliana 0.00025

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044545
        (191 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2080320 - symbol:AT3G54200 "AT3G54200" species...   283  7.6e-25   1
TAIR|locus:2062917 - symbol:AT2G46150 "AT2G46150" species...   174  2.7e-13   1
TAIR|locus:504955821 - symbol:AT3G05975 "AT3G05975" speci...   168  1.2e-12   1
TAIR|locus:2142040 - symbol:AT4G13270 "AT4G13270" species...   133  6.1e-09   1
TAIR|locus:1006230721 - symbol:AT1G64065 "AT1G64065" spec...   114  2.5e-05   1
TAIR|locus:2100177 - symbol:AT3G44380 "AT3G44380" species...   105  0.00025   1


>TAIR|locus:2080320 [details] [associations]
            symbol:AT3G54200 "AT3G54200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0046658 "anchored to plasma membrane"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR004864
            GO:GO:0009506 EMBL:CP002686 GO:GO:0046658 EMBL:AL132957
            Pfam:PF03168 EMBL:AK229134 IPI:IPI00521889 PIR:T47579
            RefSeq:NP_190988.1 UniGene:At.27525 ProteinModelPortal:Q9M386
            STRING:Q9M386 PRIDE:Q9M386 EnsemblPlants:AT3G54200.1 GeneID:824587
            KEGG:ath:AT3G54200 TAIR:At3g54200 InParanoid:Q9M386 OMA:NASSMET
            PhylomeDB:Q9M386 ProtClustDB:CLSN2685083 Genevestigator:Q9M386
            Uniprot:Q9M386
        Length = 235

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 66/191 (34%), Positives = 103/191 (53%)

Query:     5 KRSSKCLKCCCGITSXXXXXXXXXXXXXFFTLFKPKEPKITAKPVDLEKINLLFFPT--- 61
             +R   C  C C  T               FTLFKPK P  T   V ++++     P    
Sbjct:    46 RRKRNCKICIC-FTILLILLIAIVIVILAFTLFKPKRPTTTIDSVTVDRLQASVNPLLLK 104

Query:    62 IQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLT 121
             + LN+TL V +++ N N  GF Y + +A ++Y G V+ EAP+   RI AR    ++ +LT
Sbjct:   105 VLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLT 164

Query:   122 IFADKLISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQII 181
             + AD+L+S +  L D+++GV+  ++   + G+V VLK FK K  SSSSCD+SI +  + +
Sbjct:   165 LMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNV 224

Query:   182 DSV-CESKVEL 191
              S  C+   +L
Sbjct:   225 TSQHCKYSTKL 235


>TAIR|locus:2062917 [details] [associations]
            symbol:AT2G46150 "AT2G46150" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] InterPro:IPR004864 GO:GO:0005886 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC005397 Pfam:PF03168 EMBL:AY102565
            EMBL:AY649242 IPI:IPI00545872 PIR:C84899 RefSeq:NP_182138.1
            UniGene:At.36547 ProteinModelPortal:O82354 PRIDE:O82354
            EnsemblPlants:AT2G46150.1 GeneID:819222 KEGG:ath:AT2G46150
            TAIR:At2g46150 eggNOG:NOG244451 HOGENOM:HOG000237955
            InParanoid:O82354 OMA:SMIVDVS PhylomeDB:O82354 ProtClustDB:PLN03160
            ArrayExpress:O82354 Genevestigator:O82354 Uniprot:O82354
        Length = 221

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 51/192 (26%), Positives = 93/192 (48%)

Query:     6 RSSKCLKCCCGITSXXXXXXXXXXXXXFFTLFKPKEPKITAKPVDLEKINLLFFPT-IQL 64
             RS   +KC   +T+             F T+F+ K+P I    V +  ++ +     +QL
Sbjct:    31 RSRNRIKCSICVTATSLILTTIVLTLVF-TVFRVKDPIIKMNGVMVNGLDSVTGTNQVQL 89

Query:    65 ---NVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVVVAEAPVEDGRIPARGKQNISSSLT 121
                N+++ V V+V N N   FKY N T  + Y G +V EA    G+        ++ ++ 
Sbjct:    90 LGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKARPHRTSRMNVTVD 149

Query:   122 IFADKLISNSNFLGDIL-SGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQI 180
             I  D+++S+     +I  SG++N  S T + G+V ++   K+  T   +C +++ +  Q 
Sbjct:   150 IMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTVKMNCTMAVNITGQA 209

Query:   181 IDSV-CESKVEL 191
             I  V C+ K++L
Sbjct:   210 IQDVDCKKKIDL 221


>TAIR|locus:504955821 [details] [associations]
            symbol:AT3G05975 "AT3G05975" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR004864 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AC013454 Pfam:PF03168 EMBL:DQ446637
            IPI:IPI00547792 RefSeq:NP_683533.1 UniGene:At.65067
            ProteinModelPortal:Q3EBB9 EnsemblPlants:AT3G05975.1 GeneID:819768
            KEGG:ath:AT3G05975 TAIR:At3g05975 eggNOG:NOG266939
            HOGENOM:HOG000241501 InParanoid:Q3EBB9 OMA:RRICCIV PhylomeDB:Q3EBB9
            ProtClustDB:CLSN2917926 Genevestigator:Q3EBB9 Uniprot:Q3EBB9
        Length = 189

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 43/160 (26%), Positives = 77/160 (48%)

Query:    36 LFKPKEP--KITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSY 93
             +FKPK P  +  +  VD    N+     +QLN TL + + + N N   F+Y+     V Y
Sbjct:    30 VFKPKHPILQTVSSTVDGISTNISLPYEVQLNFTLTLEMLLKNPNVADFEYKTVENLVYY 89

Query:    94 HGVVVAEAPVEDGRIPARGKQNISSSLTIFADKLISN-SNFLGDILSGVMNFSSTTTLHG 152
                +V    +    +PA+G   +   L +  DK ++N  + + D+L G +   +   + G
Sbjct:    90 RDTLVGNLTLPSSTLPAKGSVLLPCPLFLQLDKFVANLGDIVQDVLHGKIVMETRAKMPG 149

Query:   153 EVIVLKYFKQKATSSSSCDISIVLQSQII-DSVCESKVEL 191
             ++ +L  FK    S S C++ +   S ++ D VC+ K +L
Sbjct:   150 KITLLGIFKIPLDSISHCNLVLGFPSMVVEDQVCDLKTKL 189


>TAIR|locus:2142040 [details] [associations]
            symbol:AT4G13270 "AT4G13270" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0000902 "cell morphogenesis" evidence=RCA]
            [GO:0016049 "cell growth" evidence=RCA] [GO:0048193 "Golgi vesicle
            transport" evidence=RCA] InterPro:IPR004864 EMBL:CP002687
            UniGene:At.33396 UniGene:At.70329 Pfam:PF03168 EMBL:BT021984
            EMBL:BT023476 IPI:IPI00523539 RefSeq:NP_193063.2
            ProteinModelPortal:Q52K84 SMR:Q52K84 PRIDE:Q52K84
            EnsemblPlants:AT4G13270.1 GeneID:826957 KEGG:ath:AT4G13270
            TAIR:At4g13270 HOGENOM:HOG000005936 InParanoid:Q52K84 OMA:SCEVYVN
            PhylomeDB:Q52K84 ProtClustDB:CLSN2690897 Genevestigator:Q52K84
            Uniprot:Q52K84
        Length = 215

 Score = 133 (51.9 bits), Expect = 6.1e-09, P = 6.1e-09
 Identities = 36/155 (23%), Positives = 73/155 (47%)

Query:    36 LFKPKEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHG 95
             L  P +P IT   ++L  I+++    I L+++  + + V NR++    Y +    + Y G
Sbjct:    62 LLYPSDPDITVSRINLNHISVVDSHKIALDLSFSLTIKVRNRDFFSLDYDSLVVSIGYRG 121

Query:    96 VVVAEAPVEDGRIPARGKQNISSSLTIFADKLISNSNFL-GDILSGVMNFSSTTTLHGEV 154
               +     + G + AR    I ++L +   +++ +  +L GD+  GV+ F +   + G++
Sbjct:   122 RELGLVKSKGGHLKARDSSYIDATLELDGLEVVHDVIYLIGDLAKGVIPFDTIAQVQGDL 181

Query:   155 IVLKYFKQKATSSSSCDISIVLQSQIIDSV-CESK 188
              VL  F        SC++ + + +Q I    C  K
Sbjct:   182 GVL-LFNIPIQGKVSCEVYVNVNNQKISHQDCHRK 215


>TAIR|locus:1006230721 [details] [associations]
            symbol:AT1G64065 "AT1G64065" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0016020 "membrane" evidence=ISS]
            InterPro:IPR004864 EMBL:CP002684 GenomeReviews:CT485782_GR
            Pfam:PF03168 EMBL:AY648317 EMBL:AY773828 IPI:IPI00524565
            RefSeq:NP_974086.1 UniGene:At.36052 UniGene:At.68825
            ProteinModelPortal:Q6DST1 PRIDE:Q6DST1 EnsemblPlants:AT1G64065.1
            GeneID:2745848 KEGG:ath:AT1G64065 TAIR:At1g64065 eggNOG:NOG306654
            HOGENOM:HOG000142255 OMA:GPRIWRR PhylomeDB:Q6DST1
            ProtClustDB:CLSN2915194 Genevestigator:Q6DST1 Uniprot:Q6DST1
        Length = 214

 Score = 114 (45.2 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 35/126 (27%), Positives = 61/126 (48%)

Query:    65 NVTLGVVVTVDNRNYGGFKYQNGTAYVSY--HGVVVAEAPVEDGRIPARGKQNISSSLT- 121
             N TL   +++ N N+G F++++ T  V Y  HGVV  E  +E  R+ A     I+  +  
Sbjct:    91 NATLVSDISIRNSNFGAFEFEDSTLRVVYADHGVV-GETKIEGRRVEAHKTVRITGVVVE 149

Query:   122 IFADKLISNSNFLGDILSGVMNFSSTTTLHGEVIVLKYFKQKATSSSSCDISIVLQSQII 181
             I + +L+   +   D+  G +   S   + G + VL   + K  S  SC + + L  + I
Sbjct:   150 IGSFRLLDTKDLDKDLRLGFLELRSVAEVRGRIKVLGRKRWKV-SVMSCTMRLNLTGRFI 208

Query:   182 DSV-CE 186
              ++ CE
Sbjct:   209 QNLLCE 214


>TAIR|locus:2100177 [details] [associations]
            symbol:AT3G44380 "AT3G44380" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0009269 "response to
            desiccation" evidence=IEA] InterPro:IPR013990 SMART:SM00769
            InterPro:IPR004864 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0009269 EMBL:AL138641 Pfam:PF03168 UniGene:At.1345
            IPI:IPI00523939 PIR:T47428 RefSeq:NP_190024.1
            ProteinModelPortal:Q9M287 PaxDb:Q9M287 PRIDE:Q9M287
            EnsemblPlants:AT3G44380.1 GeneID:823563 KEGG:ath:AT3G44380
            TAIR:At3g44380 eggNOG:NOG299663 HOGENOM:HOG000006316
            InParanoid:Q9M287 OMA:VHVTNPN PhylomeDB:Q9M287
            ProtClustDB:CLSN2684481 Genevestigator:Q9M287 Uniprot:Q9M287
        Length = 186

 Score = 105 (42.0 bits), Expect = 0.00025, P = 0.00025
 Identities = 33/121 (27%), Positives = 51/121 (42%)

Query:    38 KPKEPKITAKPVDLEKINLLFFPTIQLNVTLGVVVTVDNRNYGGFKYQNGTAYVSYHGVV 97
             KPK+P      +DL  + L   P +   + L V VT  N N     Y +    + Y G V
Sbjct:    32 KPKDPTFHLISIDLTSLKLNL-PVLDAELMLTVHVT--NPNIAAIHYSSTKMTILYDGTV 88

Query:    98 VAEAPVEDGRIPARGKQNISSSLTIFADKLISNSN-FLGDILSGVMNFSSTTTLHGEVIV 156
             +  A V+ G  PAR  Q +     +   +L  ++  F  D+ +  M   +  T+ G   V
Sbjct:    89 LGSAEVKAGSQPARSCQLLRLPARLDGMELAQHARQFFSDVANREMKLEAKLTIEGAAKV 148

Query:   157 L 157
             L
Sbjct:   149 L 149


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.135   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      191       178   0.00086  109 3  11 22  0.40    32
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  558 (59 KB)
  Total size of DFA:  136 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.92u 0.10s 16.02t   Elapsed:  00:00:01
  Total cpu time:  15.92u 0.10s 16.02t   Elapsed:  00:00:01
  Start:  Thu May  9 23:01:06 2013   End:  Thu May  9 23:01:07 2013

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